-- dump date 20140619_055052 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 880070000001 SEQ_END SEQ_END NC_015914.1 6221273 6221273 DR NC_015914.1; contig end 6221273..6221273 Cyclobacterium marinum DSM 745 YP_004772017.1 CDS Cycma_0001 NC_015914.1 84 1508 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR013317:IPR013159:IPR003593:IPR001957; KEGG: mtt:Ftrac_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein DnaA; TIGRFAM: Chromosomal replication control, initiator DnaA; chromosome replication initiator DnaA 84..1508 Cyclobacterium marinum DSM 745 11038750 YP_004772018.1 CDS Cycma_0002 NC_015914.1 1539 1946 R KEGG: psn:Pedsa_2905 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(1539..1946) Cyclobacterium marinum DSM 745 11035005 YP_004772019.1 CDS Cycma_0003 NC_015914.1 1996 2532 D PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: mtt:Ftrac_3379 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: Transmembrane protein; hypothetical protein 1996..2532 Cyclobacterium marinum DSM 745 11035006 YP_004772020.1 CDS Cycma_0004 NC_015914.1 2565 3230 D PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: mtt:Ftrac_3378 electron transport protein sco1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: SCO1/SenC family protein; electron transport protein SCO1/SenC 2565..3230 Cyclobacterium marinum DSM 745 11035007 YP_004772021.1 CDS Cycma_0005 NC_015914.1 3211 3651 D PFAM: Cytochrome c; InterPro IPR003088; KEGG: mtt:Ftrac_3377 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I; cytochrome c class I 3211..3651 Cyclobacterium marinum DSM 745 11035008 YP_004772022.1 CDS Cycma_0006 NC_015914.1 3652 4068 R KEGG: psn:Pedsa_1450 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3652..4068) Cyclobacterium marinum DSM 745 11035009 YP_004772023.1 CDS Cycma_0007 NC_015914.1 4218 4640 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4218..4640) Cyclobacterium marinum DSM 745 11035010 YP_004772024.1 CDS Cycma_0008 NC_015914.1 4651 5871 R PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mms:mma_3208 ABC-type transport system, permease component; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: permease; hypothetical protein complement(4651..5871) Cyclobacterium marinum DSM 745 11035011 YP_004772025.1 CDS Cycma_0009 NC_015914.1 5868 6506 R PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: lby:Lbys_3320 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system, ATP-binding protein; ABC transporter complement(5868..6506) Cyclobacterium marinum DSM 745 11035012 YP_004772026.1 CDS Cycma_0010 NC_015914.1 6513 7691 R PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR001789:IPR003661:IPR003594; KEGG: cyc:PCC7424_1114 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Sensor histidine kinase; response regulator receiver sensor signal transduction histidine kinase complement(6513..7691) Cyclobacterium marinum DSM 745 11035013 YP_004772027.1 CDS Cycma_0011 NC_015914.1 7733 9106 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR000014; KEGG: srm:SRM_00549 sensory histidine protein kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: PAS domain-containing protein; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase complement(7733..9106) Cyclobacterium marinum DSM 745 11035014 YP_004772028.1 CDS Cycma_0012 NC_015914.1 9103 9420 R hypothetical protein complement(9103..9420) Cyclobacterium marinum DSM 745 11035015 YP_004772029.1 CDS Cycma_0013 NC_015914.1 9552 10433 D PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR003781:IPR005811:IPR005810; KEGG: mtt:Ftrac_1148 succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit; succinyl-CoA synthetase subunit alpha 9552..10433 Cyclobacterium marinum DSM 745 11035016 YP_004772030.1 CDS Cycma_0014 NC_015914.1 11000 12967 D PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Protein of unknown function (DUF1587); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585); InterProIPR013036:IPR013043:IPR013042:IPR013039:IPR 011478; KEGG: ipa:Isop_0343 hypothetical protein; PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1587; Protein of unknown function DUF1595; Protein of unknown function DUF1588; Protein of unknown function DUF1585; SPTR: uncharacterized protein; hypothetical protein 11000..12967 Cyclobacterium marinum DSM 745 11035017 YP_004772031.1 CDS Cycma_0015 NC_015914.1 13128 14513 D PFAM: Protein of unknown function (DUF1552); InterPro IPR011447:IPR006311; KEGG: ipa:Isop_0342 hypothetical protein; PFAM: Protein of unknown function DUF1552; SPTR: uncharacterized protein; hypothetical protein 13128..14513 Cyclobacterium marinum DSM 745 11035018 YP_004772032.1 CDS Cycma_0016 NC_015914.1 14679 16079 D PFAM: Planctomycete cytochrome C; InterPro IPR011429; KEGG: fbc:FB2170_08779 hypothetical protein; PFAM: Cytochrome C, Planctomycete; SPTR: uncharacterized protein; cytochrome C 14679..16079 Cyclobacterium marinum DSM 745 11035019 YP_004772033.1 CDS Cycma_0017 NC_015914.1 16145 17605 D PFAM: PhoPQ-activated pathogenicity-related protein; COGs: COG4287 PhoPQ-activated pathogenicity-related protein; InterPro IPR009199; KEGG: sus:Acid_2416 PhoPQ-activated pathogenicity-related protein; PFAM: PhoPQ-activated pathogenicity-related protein, PqaA type; SPTR: Autocrine proliferation repressor; PhoPQ-activated pathogenicity-like protein PqaA type 16145..17605 Cyclobacterium marinum DSM 745 11035020 YP_004772034.1 CDS Cycma_0018 NC_015914.1 17610 19742 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterProIPR019551:IPR002372:IPR019556:IPR003088:IPR 018391; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; Cytochrome c, class I; SPTR: Cytochrome c subfamily; PQQ-dependent enzyme complement(17610..19742) Cyclobacterium marinum DSM 745 11035021 YP_004772035.1 CDS Cycma_0019 NC_015914.1 19920 20423 D PFAM: Phosphoglycerate mutase; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: sua:Saut_0659 phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase domain protein; phosphohistidine phosphatase SixA 19920..20423 Cyclobacterium marinum DSM 745 11035022 YP_004772036.1 CDS Cycma_0020 NC_015914.1 20410 21141 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: mtt:Ftrac_0810 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(20410..21141) Cyclobacterium marinum DSM 745 11035023 YP_004772037.1 CDS Cycma_0021 NC_015914.1 21296 22666 R PFAM: MatE; TIGRFAM: efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mtt:Ftrac_1152 mate efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: Multidrug resistance protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(21296..22666) Cyclobacterium marinum DSM 745 11035024 YP_004772038.1 CDS Cycma_0022 NC_015914.1 22679 23218 R PFAM: NUDIX domain; InterPro IPR000086; KEGG: mtt:Ftrac_0076 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; NUDIX hydrolase complement(22679..23218) Cyclobacterium marinum DSM 745 11035025 YP_004772039.1 CDS Cycma_0023 NC_015914.1 23275 23757 R PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: dfe:Dfer_3786 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(23275..23757) Cyclobacterium marinum DSM 745 11035026 YP_004772040.1 CDS Cycma_0024 NC_015914.1 23968 25170 R KEGG: mtt:Ftrac_2413 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(23968..25170) Cyclobacterium marinum DSM 745 11035027 YP_004772041.1 CDS Cycma_0025 NC_015914.1 25410 26600 R COGs: COG4091 homoserine dehydrogenase; KEGG: rmr:Rmar_1155 oxidoreductase domain-containing protein; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(25410..26600) Cyclobacterium marinum DSM 745 11035028 YP_004772042.1 CDS Cycma_0026 NC_015914.1 27013 29988 D PFAM: Protein of unknown function (DUF2723); KEGG: mtt:Ftrac_2129 hypothetical protein; SPTR: Membrane protein; hypothetical protein 27013..29988 Cyclobacterium marinum DSM 745 11035029 YP_004772043.1 CDS Cycma_0027 NC_015914.1 30053 30829 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mtt:Ftrac_2286 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Probable 3-demethylubiquinone-9 3-O-methyltransferase; type 11 methyltransferase complement(30053..30829) Cyclobacterium marinum DSM 745 11035030 YP_004772044.1 CDS Cycma_0028 NC_015914.1 30881 32128 D KEGG: dfe:Dfer_2660 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 30881..32128 Cyclobacterium marinum DSM 745 11035031 YP_004772045.1 CDS Cycma_0029 NC_015914.1 32101 32877 D PFAM: SpoU rRNA Methylase; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: mtt:Ftrac_2133 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: TrmH family RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; TrmH family RNA methyltransferase 32101..32877 Cyclobacterium marinum DSM 745 11035032 YP_004772046.1 CDS Cycma_0030 NC_015914.1 32898 34244 D PFAM: RmuC family; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: ran:Riean_1384 hypothetical protein; PFAM: RmuC; SPTR: RmuC domain protein; RmuC-domain-containing protein 32898..34244 Cyclobacterium marinum DSM 745 11035033 YP_004772047.1 CDS Cycma_0031 NC_015914.1 34327 34980 R KEGG: dfe:Dfer_4245 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(34327..34980) Cyclobacterium marinum DSM 745 11035034 YP_004772048.1 CDS Cycma_0032 NC_015914.1 35006 36370 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: dfe:Dfer_1887 signal peptide; SPTR: Signal peptide; hypothetical protein complement(35006..36370) Cyclobacterium marinum DSM 745 11035035 YP_004772049.1 CDS Cycma_0033 NC_015914.1 36400 37488 R PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: dfe:Dfer_1888 peptidase M19 renal dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Peptidase M19 renal dipeptidase; peptidase M19 complement(36400..37488) Cyclobacterium marinum DSM 745 11035036 YP_004772050.1 CDS Cycma_0034 NC_015914.1 37485 37874 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175:IPR006056; KEGG: dfe:Dfer_1892 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; endoribonuclease L-PSP complement(37485..37874) Cyclobacterium marinum DSM 745 11035037 YP_004772051.1 CDS Cycma_0035 NC_015914.1 37908 38726 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dfe:Dfer_1898 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(37908..38726) Cyclobacterium marinum DSM 745 11035038 YP_004772052.1 CDS Cycma_0036 NC_015914.1 38707 39483 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dfe:Dfer_1893 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(38707..39483) Cyclobacterium marinum DSM 745 11035039 YP_004772053.1 CDS Cycma_0037 NC_015914.1 39473 40390 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; KEGG: dfe:Dfer_1894 oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(39473..40390) Cyclobacterium marinum DSM 745 11035040 YP_004772054.1 CDS Cycma_0038 NC_015914.1 40458 41405 R PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: dfe:Dfer_1895 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase; aldo/keto reductase complement(40458..41405) Cyclobacterium marinum DSM 745 11035041 YP_004772055.1 CDS Cycma_0039 NC_015914.1 41402 42223 R PFAM: HpcH/HpaI aldolase/citrate lyase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: dfe:Dfer_1896 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: HpcH/HpaI aldolase; HpcH/HpaI aldolase complement(41402..42223) Cyclobacterium marinum DSM 745 11035042 YP_004772056.1 CDS Cycma_0040 NC_015914.1 42467 43195 R PFAM: Oxidoreductase FAD-binding domain; Siderophore-interacting protein; COGs: COG2375 Siderophore-interacting protein; InterPro IPR007037; KEGG: chu:CHU_1980 siderophore-interacting protein; PFAM: Siderophore-interacting protein; SPTR: Siderophore-interacting protein; siderophore-interacting protein complement(42467..43195) Cyclobacterium marinum DSM 745 11035043 YP_004772057.1 CDS Cycma_0041 NC_015914.1 43285 44148 R PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: rbi:RB2501_12137 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(43285..44148) Cyclobacterium marinum DSM 745 11035044 YP_004772058.1 CDS Cycma_0042 NC_015914.1 44353 45552 R PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: chu:CHU_0628 flavoprotein; PFAM: HI0933-like protein; SPTR: Flavoprotein; TIGRFAM: HI0933-like protein; hypothetical protein complement(44353..45552) Cyclobacterium marinum DSM 745 11035045 YP_004772059.1 CDS Cycma_0043 NC_015914.1 45820 46782 R PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: sli:Slin_0609 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: uncharacterized protein; dihydrodipicolinate synthetase complement(45820..46782) Cyclobacterium marinum DSM 745 11035046 YP_004772060.1 CDS Cycma_0044 NC_015914.1 46764 49103 R PFAM: Glycosyl hydrolase 67 N-terminus; KEGG: sli:Slin_6579 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(46764..49103) Cyclobacterium marinum DSM 745 11035047 YP_004772061.1 CDS Cycma_0045 NC_015914.1 49304 50296 R PFAM: Beta-galactosidase; KEGG: hch:HCH_01403 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(49304..50296) Cyclobacterium marinum DSM 745 11035048 YP_004772062.1 CDS Cycma_0046 NC_015914.1 50584 51759 D PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: cly:Celly_1285 sodium:dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Serine/threonine transporter; sodium:dicarboxylate symporter 50584..51759 Cyclobacterium marinum DSM 745 11035049 YP_004772063.1 CDS Cycma_0047 NC_015914.1 52144 54417 R PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; COGs: COG0376 Catalase (peroxidase I); HAMAP: Catalase-peroxidase haem; InterPro IPR002016:IPR000763; KEGG: fbc:FB2170_07215 catalase-peroxidase; PFAM: Haem peroxidase, plant/fungal/bacterial; SPTR: Catalase-peroxidase; TIGRFAM: Catalase-peroxidase haem; catalase-peroxidase complement(52144..54417) Cyclobacterium marinum DSM 745 11035050 YP_004772064.1 CDS Cycma_0048 NC_015914.1 54838 56259 R PFAM: BlaR1 peptidase M56; Surface antigen variable number repeat; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR008756:IPR010827; KEGG: cat:CA2559_07981 TonB; PFAM: Surface antigen variable number; Peptidase M56, BlaR1; SPTR: TonB; surface antigen variable number repeat-containing protein complement(54838..56259) Cyclobacterium marinum DSM 745 11035051 YP_004772065.1 CDS Cycma_0049 NC_015914.1 56252 56626 R PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: phe:Phep_0214 penicillinase repressor; PFAM: Penicillinase repressor; SPTR: transcriptional regulator; CopY family transcriptional repressor complement(56252..56626) Cyclobacterium marinum DSM 745 11035052 YP_004772066.1 CDS Cycma_0050 NC_015914.1 56854 58650 R InterPro IPR006626; hypothetical protein complement(56854..58650) Cyclobacterium marinum DSM 745 11035053 YP_004772067.1 CDS Cycma_0051 NC_015914.1 58828 60468 R hypothetical protein complement(58828..60468) Cyclobacterium marinum DSM 745 11035054 YP_004772068.1 CDS Cycma_0052 NC_015914.1 60832 61236 R KEGG: eli:ELI_11025 hypothetical protein; SPTR: integral membrane protein; hypothetical protein complement(60832..61236) Cyclobacterium marinum DSM 745 11035055 YP_004772069.1 CDS Cycma_0053 NC_015914.1 61306 62133 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; InterPro IPR000005:IPR018060; KEGG: aba:Acid345_1425 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator complement(61306..62133) Cyclobacterium marinum DSM 745 11035056 YP_004772070.1 CDS Cycma_0054 NC_015914.1 62393 63967 R KEGG: chu:CHU_3611 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(62393..63967) Cyclobacterium marinum DSM 745 11035057 YP_004772071.1 CDS Cycma_0055 NC_015914.1 65094 65684 D PFAM: Helix-turn-helix; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 65094..65684 Cyclobacterium marinum DSM 745 11035058 YP_004772072.1 CDS Cycma_0056 NC_015914.1 65847 66512 R KEGG: cao:Celal_3595 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(65847..66512) Cyclobacterium marinum DSM 745 11035059 YP_004772073.1 CDS Cycma_0057 NC_015914.1 66759 69041 R KEGG: gfo:GFO_2425 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(66759..69041) Cyclobacterium marinum DSM 745 11035060 YP_004772074.1 CDS Cycma_0058 NC_015914.1 69049 70959 R PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: slg:SLGD_02237 phage tail fiber; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; G-D-S-L family lipolytic protein complement(69049..70959) Cyclobacterium marinum DSM 745 11035061 YP_004772075.1 CDS Cycma_0059 NC_015914.1 70966 75951 R PFAM: Pectate lyase; COGs: COG3866 Pectate lyase; InterPro IPR002022; KEGG: S-layer domain-containing protein; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; SPTR: Cell wall/surface repeat protein; pectate lyase/Amb allergen complement(70966..75951) Cyclobacterium marinum DSM 745 11035062 YP_004772076.1 CDS Cycma_0060 NC_015914.1 75954 79352 R KEGG: psn:Pedsa_0941 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(75954..79352) Cyclobacterium marinum DSM 745 11035063 YP_004772077.1 CDS Cycma_0061 NC_015914.1 79552 80025 R KEGG: psn:Pedsa_0942 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(79552..80025) Cyclobacterium marinum DSM 745 11035064 YP_004772078.1 CDS Cycma_0062 NC_015914.1 80037 80552 R KEGG: psn:Pedsa_0943 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(80037..80552) Cyclobacterium marinum DSM 745 11035065 YP_004772079.1 CDS Cycma_0063 NC_015914.1 80565 80924 R KEGG: psn:Pedsa_0944 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(80565..80924) Cyclobacterium marinum DSM 745 11035066 YP_004772080.1 CDS Cycma_0064 NC_015914.1 80921 81421 R hypothetical protein complement(80921..81421) Cyclobacterium marinum DSM 745 11035067 YP_004772081.1 CDS Cycma_0065 NC_015914.1 81409 81765 R PFAM: Peptidase M15; InterPro IPR013230; KEGG: rbi:RB2501_01256 hypothetical protein; PFAM: Peptidase M15A, C-terminal; SPTR: uncharacterized protein; peptidase M15A complement(81409..81765) Cyclobacterium marinum DSM 745 11035068 YP_004772082.1 CDS Cycma_0066 NC_015914.1 81762 82274 R PFAM: Holin family; KEGG: psn:Pedsa_0946 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(81762..82274) Cyclobacterium marinum DSM 745 11035069 YP_004772083.1 CDS Cycma_0067 NC_015914.1 82276 83385 R KEGG: osp:Odosp_0803 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(82276..83385) Cyclobacterium marinum DSM 745 11035070 YP_004772084.1 CDS Cycma_0068 NC_015914.1 83451 84599 R KEGG: osp:Odosp_0804 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(83451..84599) Cyclobacterium marinum DSM 745 11035071 YP_004772085.1 CDS Cycma_0069 NC_015914.1 84667 85122 D PFAM: transcription regulator (DUF1323); KEGG: osp:Odosp_0805 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 84667..85122 Cyclobacterium marinum DSM 745 11035072 YP_004772086.1 CDS Cycma_0070 NC_015914.1 85119 86627 D KEGG: osp:Odosp_0806 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 85119..86627 Cyclobacterium marinum DSM 745 11035073 YP_004772087.1 CDS Cycma_0071 NC_015914.1 86630 87040 D PFAM: Protein of unknown function (DUF1320); KEGG: osp:Odosp_0807 hypothetical protein; SPTR: Predicted protein; hypothetical protein 86630..87040 Cyclobacterium marinum DSM 745 11035074 YP_004772088.1 CDS Cycma_0072 NC_015914.1 87062 89707 D PFAM: Protein of unknown function (DUF935); Phage Mu protein F like protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279:IPR006528; KEGG: osp:Odosp_0808 phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage head morphogenesis protein, SPP1 gp7; Protein of unknown function DUF935; SPTR: Predicted protein; TIGRFAM: Phage head morphogenesis protein, SPP1 gp7; phage head morphogenesis protein 87062..89707 Cyclobacterium marinum DSM 745 11035075 YP_004772089.1 CDS Cycma_0073 NC_015914.1 89712 90209 D PFAM: Phage virion morphogenesis family; KEGG: psn:Pedsa_0954 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 89712..90209 Cyclobacterium marinum DSM 745 11035076 YP_004772090.1 CDS Cycma_0074 NC_015914.1 90266 90703 D KEGG: psn:Pedsa_0955 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 90266..90703 Cyclobacterium marinum DSM 745 11035077 YP_004772091.1 CDS Cycma_0075 NC_015914.1 90718 91041 R KEGG: cpi:Cpin_0278 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(90718..91041) Cyclobacterium marinum DSM 745 11035078 YP_004772092.1 CDS Cycma_0076 NC_015914.1 91195 91467 R hypothetical protein complement(91195..91467) Cyclobacterium marinum DSM 745 11035079 YP_004772093.1 CDS Cycma_0077 NC_015914.1 91484 91927 R hypothetical protein complement(91484..91927) Cyclobacterium marinum DSM 745 11035080 YP_004772094.1 CDS Cycma_0078 NC_015914.1 92051 92287 R SPTR: uncharacterized protein; hypothetical protein complement(92051..92287) Cyclobacterium marinum DSM 745 11035081 YP_004772095.1 CDS Cycma_0079 NC_015914.1 92429 92740 R hypothetical protein complement(92429..92740) Cyclobacterium marinum DSM 745 11035082 YP_004772096.1 CDS Cycma_0080 NC_015914.1 92962 93228 R hypothetical protein complement(92962..93228) Cyclobacterium marinum DSM 745 11035083 YP_004772097.1 CDS Cycma_0081 NC_015914.1 93523 93942 R KEGG: mpo:Mpop_2745 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(93523..93942) Cyclobacterium marinum DSM 745 11035084 YP_004772098.1 CDS Cycma_0082 NC_015914.1 93939 94136 R hypothetical protein complement(93939..94136) Cyclobacterium marinum DSM 745 11035085 YP_004772099.1 CDS Cycma_0083 NC_015914.1 94163 94543 R hypothetical protein complement(94163..94543) Cyclobacterium marinum DSM 745 11035086 YP_004772100.1 CDS Cycma_0084 NC_015914.1 94547 94984 R KEGG: bbl:BLBBGE_301 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(94547..94984) Cyclobacterium marinum DSM 745 11035087 YP_004772101.1 CDS Cycma_0085 NC_015914.1 94984 95772 R KEGG: osp:Odosp_0820 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(94984..95772) Cyclobacterium marinum DSM 745 11035088 YP_004772102.1 CDS Cycma_0086 NC_015914.1 95868 96467 R hypothetical protein complement(95868..96467) Cyclobacterium marinum DSM 745 11035089 YP_004772103.1 CDS Cycma_0087 NC_015914.1 96464 97093 R PFAM: Protein of unknown function (DUF3164); KEGG: psn:Pedsa_0970 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(96464..97093) Cyclobacterium marinum DSM 745 11035090 YP_004772104.1 CDS Cycma_0088 NC_015914.1 97059 97229 R hypothetical protein complement(97059..97229) Cyclobacterium marinum DSM 745 11035091 YP_004772105.1 CDS Cycma_0089 NC_015914.1 97222 97536 R hypothetical protein complement(97222..97536) Cyclobacterium marinum DSM 745 11035092 YP_004772106.1 CDS Cycma_0091 NC_015914.1 97834 98226 R hypothetical protein complement(97834..98226) Cyclobacterium marinum DSM 745 11035094 YP_004772107.1 CDS Cycma_0092 NC_015914.1 98463 99344 R KEGG: wvi:Weevi_0139 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(98463..99344) Cyclobacterium marinum DSM 745 11035095 YP_004772108.1 CDS Cycma_0093 NC_015914.1 99402 101441 R KEGG: osp:Odosp_0824 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(99402..101441) Cyclobacterium marinum DSM 745 11035096 YP_004772109.1 CDS Cycma_0094 NC_015914.1 101443 101715 R hypothetical protein complement(101443..101715) Cyclobacterium marinum DSM 745 11035097 YP_004772110.1 CDS Cycma_0095 NC_015914.1 101750 102253 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: ran:Riean_0339 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SPTR: uncharacterized protein; helix-turn-helix domain-containing protein 101750..102253 Cyclobacterium marinum DSM 745 11035098 YP_004772111.1 CDS Cycma_0096 NC_015914.1 102440 103168 R hypothetical protein complement(102440..103168) Cyclobacterium marinum DSM 745 11035099 YP_004772112.1 CDS Cycma_0097 NC_015914.1 103889 105151 D KEGG: dfe:Dfer_3218 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 103889..105151 Cyclobacterium marinum DSM 745 11035100 YP_004772113.1 CDS Cycma_0098 NC_015914.1 105262 106578 D KEGG: slp:Slip_0781 PHP domain protein; SPTR: PHP domain protein; hypothetical protein 105262..106578 Cyclobacterium marinum DSM 745 11035101 YP_004772114.1 CDS Cycma_0099 NC_015914.1 106626 107591 D PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR002018; KEGG: psl:Psta_2974 alpha/beta hydrolase fold-3 domain-containing protein; PFAM: Carboxylesterase, type B; SPTR: Alpha/beta hydrolase fold-3 domain protein; carboxylesterase type B 106626..107591 Cyclobacterium marinum DSM 745 11035102 YP_004772115.1 CDS Cycma_0100 NC_015914.1 107969 110077 R PFAM: FG-GAP repeat; InterPro IPR013517; KEGG: pbs:Plabr_4234 FG-GAP repeat protein; PFAM: FG-GAP; SPTR: uncharacterized protein; hypothetical protein complement(107969..110077) Cyclobacterium marinum DSM 745 11035103 YP_004772116.1 CDS Cycma_0101 NC_015914.1 110097 111200 R COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: pdi:BDI_1341 transmembrane protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: transmembrane protein; hypothetical protein complement(110097..111200) Cyclobacterium marinum DSM 745 11035104 YP_004772117.1 CDS Cycma_0102 NC_015914.1 111382 112617 R KEGG: pbs:Plabr_4678 sialidase; SPTR: Probable sialidase; sialidase complement(111382..112617) Cyclobacterium marinum DSM 745 11035105 YP_004772118.1 CDS Cycma_0103 NC_015914.1 112859 113494 D PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: gfo:GFO_1136 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide binding-regulatory protein; Crp/Fnr family transcriptional regulator 112859..113494 Cyclobacterium marinum DSM 745 11035106 YP_004772119.1 CDS Cycma_0104 NC_015914.1 113563 114441 D PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: gfo:GFO_1139 pirin family protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin family protein; pirin 113563..114441 Cyclobacterium marinum DSM 745 11035107 YP_004772120.1 CDS Cycma_0105 NC_015914.1 114680 115576 D KEGG: bfs:BF0044 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 114680..115576 Cyclobacterium marinum DSM 745 11035108 YP_004772121.1 CDS Cycma_0106 NC_015914.1 115607 115810 D hypothetical protein 115607..115810 Cyclobacterium marinum DSM 745 11035109 YP_004772122.1 CDS Cycma_0107 NC_015914.1 115860 116999 D KEGG: pdi:BDI_3448 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 115860..116999 Cyclobacterium marinum DSM 745 11035110 YP_004772123.1 CDS Cycma_0108 NC_015914.1 117350 119131 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR001450; KEGG: glutamate synthase (NADPH); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S binding domain protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 117350..119131 Cyclobacterium marinum DSM 745 11035111 YP_004772124.1 CDS Cycma_0109 NC_015914.1 119128 120993 D PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752:IPR002880; KEGG: gpb:HDN1F_09550 2-ketoglutarate: nadp oxidoreductase, alpha subunit; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; SPTR: 2-ketoglutarate: nadp oxidoreductase, alpha subunit; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; 2-oxoacid:acceptor oxidoreductase subunit alpha 119128..120993 Cyclobacterium marinum DSM 745 11035112 YP_004772125.1 CDS Cycma_0110 NC_015914.1 120968 122020 D PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: gpb:HDN1F_09560 2-ketoglutarate: NADP oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: 2-ketoglutarate: NADP oxidoreductase, beta subunit; thiamine pyrophosphate TPP-binding domain-containing protein 120968..122020 Cyclobacterium marinum DSM 745 11035113 YP_004772126.1 CDS Cycma_0111 NC_015914.1 122710 123174 D hypothetical protein 122710..123174 Cyclobacterium marinum DSM 745 11035114 YP_004772127.1 CDS Cycma_0112 NC_015914.1 123928 124275 D PFAM: IS66 Orf2 like protein; InterPro IPR008878; KEGG: zpr:ZPR_3984 transposase orf1, IS66 family protein; PFAM: Transposase (), IS66 Orf2 like; SPTR: Transposase orf1, IS66 family protein; IS66 Orf2 family protein 123928..124275 Cyclobacterium marinum DSM 745 11035115 YP_004772128.1 CDS Cycma_0113 NC_015914.1 124351 125871 D PFAM: Transposase IS66 family; COGs: COG3436 Transposase and inactivated derivatives; InterPro IPR004291; KEGG: shg:Sph21_5072 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase; transposase IS66 124351..125871 Cyclobacterium marinum DSM 745 11035116 YP_004772129.1 CDS Cycma_0114 NC_015914.1 126100 127290 R PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126; KEGG: rbi:RB2501_04560 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; SPTR: DNA polymerase IV 2; DNA polymerase IV complement(126100..127290) Cyclobacterium marinum DSM 745 11035117 YP_004772130.1 CDS Cycma_0115 NC_015914.1 127410 128105 D PFAM: Helix-turn-helix; InterPro IPR001387:IPR019759; KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; helix-turn-helix domain-containing protein 127410..128105 Cyclobacterium marinum DSM 745 11035118 YP_004772131.1 CDS Cycma_0116 NC_015914.1 128078 128239 D hypothetical protein 128078..128239 Cyclobacterium marinum DSM 745 11035119 YP_004772132.1 CDS Cycma_0117 NC_015914.1 128512 128997 D PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fri:FraEuI1c_5545 methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 128512..128997 Cyclobacterium marinum DSM 745 11035120 YP_004772133.1 CDS Cycma_0118 NC_015914.1 129048 129509 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: lby:Lbys_1078 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Transcriptional regulator, MarR family/acetyltransferase, GNAT family protein; N-acetyltransferase GCN5 129048..129509 Cyclobacterium marinum DSM 745 11035121 YP_004772134.1 CDS Cycma_0119 NC_015914.1 129934 130404 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: phe:Phep_0424 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 129934..130404 Cyclobacterium marinum DSM 745 11035122 YP_004772135.1 CDS Cycma_0120 NC_015914.1 130411 130956 D KEGG: cpi:Cpin_4989 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 130411..130956 Cyclobacterium marinum DSM 745 11035123 YP_004772136.1 CDS Cycma_0121 NC_015914.1 131277 132170 D PFAM: Aldose 1-epimerase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: lcb:LCABL_16300 galactose mutarotase related enzyme; PFAM: Aldose 1-epimerase; SPTR: Galactose mutarotase related enzyme; aldose 1-epimerase 131277..132170 Cyclobacterium marinum DSM 745 11035125 YP_004772137.1 CDS Cycma_0122 NC_015914.1 132249 134168 D PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: mtt:Ftrac_1356 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter 132249..134168 Cyclobacterium marinum DSM 745 11035126 YP_004772138.1 CDS Cycma_0123 NC_015914.1 134266 135540 D KEGG: sli:Slin_4282 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 134266..135540 Cyclobacterium marinum DSM 745 11035127 YP_004772139.1 CDS Cycma_0124 NC_015914.1 135910 136797 R PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743; KEGG: chu:CHU_2218 hypothetical protein; PFAM: Protein of unknown function DUF57; SPTR: CRISPR-associated protein Cas6; hypothetical protein complement(135910..136797) Cyclobacterium marinum DSM 745 11035128 YP_004772140.1 CDS Cycma_0125 NC_015914.1 136909 138006 R PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; small GTP-binding protein domain; COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013029:IPR004396; KEGG: chu:CHU_2219 GTP-dependent nucleic acid-binding protein EngD; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; GTP-binding protein YchF complement(136909..138006) Cyclobacterium marinum DSM 745 11035129 YP_004772141.1 CDS Cycma_0126 NC_015914.1 138012 139103 R PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: mtt:Ftrac_2891 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: uncharacterized protein; hypothetical protein complement(138012..139103) Cyclobacterium marinum DSM 745 11035130 YP_004772142.1 CDS Cycma_0127 NC_015914.1 139237 139590 R PFAM: Protein of unknown function (DUF3276); InterPro IPR006628; KEGG: chu:CHU_2220 hypothetical protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: uncharacterized protein; PUR-alpha/beta/gamma DNA/RNA-binding protein complement(139237..139590) Cyclobacterium marinum DSM 745 11035131 YP_004772143.1 CDS Cycma_0128 NC_015914.1 139769 140116 R InterPro IPR001450; KEGG: mtt:Ftrac_1095 ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Ferredoxin; 4Fe-4S ferredoxin complement(139769..140116) Cyclobacterium marinum DSM 745 11035132 YP_004772144.1 CDS Cycma_0129 NC_015914.1 140333 141349 D PFAM: Acyl-CoA reductase (LuxC); InterPro IPR008670; KEGG: mtt:Ftrac_1123 acyl-CoA reductase; PFAM: Acyl-CoA reductase; SPTR: uncharacterized protein; acyl-CoA reductase 140333..141349 Cyclobacterium marinum DSM 745 11035133 YP_004772145.1 CDS Cycma_0130 NC_015914.1 141756 142700 R PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: mtt:Ftrac_0396 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: uncharacterized protein; hypothetical protein complement(141756..142700) Cyclobacterium marinum DSM 745 11035134 YP_004772146.1 CDS Cycma_0131 NC_015914.1 142942 143130 D PFAM: CsbD-like; InterPro IPR008462; KEGG: shg:Sph21_2143 CsbD family protein; PFAM: CsbD-like; SPTR: CsbD family protein; CsbD family protein 142942..143130 Cyclobacterium marinum DSM 745 11035135 YP_004772147.1 CDS Cycma_0132 NC_015914.1 143622 144587 D PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: dfe:Dfer_1891 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; SPTR: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase 143622..144587 Cyclobacterium marinum DSM 745 11035136 YP_004772148.1 CDS Cycma_0133 NC_015914.1 144592 145905 D PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814; KEGG: dfe:Dfer_1890 aminotransferase class-III; PFAM: Aminotransferase class-III; SPTR: Aminotransferase class-III; class III aminotransferase 144592..145905 Cyclobacterium marinum DSM 745 11035137 YP_004772149.1 CDS Cycma_0134 NC_015914.1 145907 146812 D PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: dfe:Dfer_1889 3-hydroxyacyl-CoA dehydrogenase domain protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxyacyl-CoA dehydrogenase, NAD binding; SPTR: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase 145907..146812 Cyclobacterium marinum DSM 745 11035138 YP_004772150.1 CDS Cycma_0135 NC_015914.1 146837 147568 D PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: dfe:Dfer_1903 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 146837..147568 Cyclobacterium marinum DSM 745 11035139 YP_004772151.1 CDS Cycma_0136 NC_015914.1 147574 150072 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: spq:SPAB_02414 hypothetical protein; PFAM: Sodium/solute symporter; SPTR: uncharacterized protein; Na+/solute symporter 147574..150072 Cyclobacterium marinum DSM 745 11035140 YP_004772152.1 CDS Cycma_0137 NC_015914.1 150197 152509 D PFAM: Amidohydrolase; Aminotransferase class-III; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR006992:IPR005814; KEGG: sua:Saut_0133 aminotransferase class-III; PFAM: Aminotransferase class-III; Amidohydrolase 2; SPTR: Aminotransferase class-III; class III aminotransferase 150197..152509 Cyclobacterium marinum DSM 745 11035141 YP_004772153.1 CDS Cycma_0138 NC_015914.1 152750 153268 D PFAM: DinB family; InterPro IPR007837; KEGG: cly:Celly_0984 DinB family protein; PFAM: DinB; SPTR: DinB family protein; DinB family protein 152750..153268 Cyclobacterium marinum DSM 745 11035142 YP_004772154.1 CDS Cycma_0139 NC_015914.1 153631 156000 R KEGG: psl:Psta_0403 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(153631..156000) Cyclobacterium marinum DSM 745 11035143 YP_004772155.1 CDS Cycma_0140 NC_015914.1 156032 157411 R InterPro IPR006626; KEGG: psl:Psta_2307 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(156032..157411) Cyclobacterium marinum DSM 745 11035144 YP_004772156.1 CDS Cycma_0141 NC_015914.1 157466 160537 R PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR004155:IPR003088:IPR013428:IPR013427; KEGG: rba:RB6185 L-sorbosone dehydrogenase; PFAM: Cytochrome c, class I; PBS lyase HEAT-like repeat; SPTR: uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein complement(157466..160537) Cyclobacterium marinum DSM 745 11035145 YP_004772157.1 CDS Cycma_0142 NC_015914.1 161704 162147 R hypothetical protein complement(161704..162147) Cyclobacterium marinum DSM 745 11035146 YP_004772158.1 CDS Cycma_0143 NC_015914.1 162153 164549 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: bth:BT_2172 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: SusC homolog; TonB-dependent receptor plug complement(162153..164549) Cyclobacterium marinum DSM 745 11035147 YP_004772159.1 CDS Cycma_0144 NC_015914.1 164536 165471 R hypothetical protein complement(164536..165471) Cyclobacterium marinum DSM 745 11035148 YP_004772160.1 CDS Cycma_0146 NC_015914.1 166119 166319 R hypothetical protein complement(166119..166319) Cyclobacterium marinum DSM 745 11035150 YP_004772161.1 CDS Cycma_0147 NC_015914.1 167389 168906 R KEGG: phe:Phep_0336 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(167389..168906) Cyclobacterium marinum DSM 745 11035151 YP_004772162.1 CDS Cycma_0148 NC_015914.1 168906 170030 R PFAM: Copper binding proteins, plastocyanin/azurin family; InterPro IPR000923; KEGG: phe:Phep_0335 blue (type 1) copper domain-containing protein; PFAM: Blue (type 1) copper domain; SPTR: Blue (Type 1) copper domain protein; blue (type 1) copper domain-containing protein complement(168906..170030) Cyclobacterium marinum DSM 745 11035152 YP_004772163.1 CDS Cycma_0149 NC_015914.1 170046 171434 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2085 N-acetylgalactosamine-4-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfate sulfatase (GALNS); sulfatase complement(170046..171434) Cyclobacterium marinum DSM 745 11035153 YP_004772164.1 CDS Cycma_0150 NC_015914.1 171466 172347 R PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0338 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: uncharacterized protein; amidohydrolase complement(171466..172347) Cyclobacterium marinum DSM 745 11035154 YP_004772165.1 CDS Cycma_0151 NC_015914.1 172384 173325 R PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0340 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: uncharacterized protein; amidohydrolase complement(172384..173325) Cyclobacterium marinum DSM 745 11035155 YP_004772166.1 CDS Cycma_0152 NC_015914.1 173365 174735 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: phe:Phep_0352 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Glutamine--scyllo-inositol transaminase; DegT/DnrJ/EryC1/StrS aminotransferase complement(173365..174735) Cyclobacterium marinum DSM 745 11035156 YP_004772167.1 CDS Cycma_0153 NC_015914.1 174818 175624 R KEGG: phe:Phep_0340 amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(174818..175624) Cyclobacterium marinum DSM 745 11035157 YP_004772168.1 CDS Cycma_0154 NC_015914.1 175611 176531 R PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0338 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(175611..176531) Cyclobacterium marinum DSM 745 11035158 YP_004772169.1 CDS Cycma_0155 NC_015914.1 176844 178319 R PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_2856 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(176844..178319) Cyclobacterium marinum DSM 745 11035159 YP_004772170.1 CDS Cycma_0156 NC_015914.1 178347 181478 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_2857 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(178347..181478) Cyclobacterium marinum DSM 745 11035160 YP_004772171.1 CDS Cycma_0157 NC_015914.1 182018 182548 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 182018..182548 Cyclobacterium marinum DSM 745 11035161 YP_004772172.1 CDS Cycma_0158 NC_015914.1 182545 183210 D SPTR: uncharacterized protein; hypothetical protein 182545..183210 Cyclobacterium marinum DSM 745 11035162 YP_004772173.1 CDS Cycma_0159 NC_015914.1 183230 183994 D SPTR: uncharacterized protein; hypothetical protein 183230..183994 Cyclobacterium marinum DSM 745 11035163 YP_004772174.1 CDS Cycma_0160 NC_015914.1 184784 188047 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4184 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug 184784..188047 Cyclobacterium marinum DSM 745 11035164 YP_004772175.1 CDS Cycma_0161 NC_015914.1 188097 190118 D PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_0632 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 188097..190118 Cyclobacterium marinum DSM 745 11035165 YP_004772176.1 CDS Cycma_0162 NC_015914.1 190228 191571 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: sli:Slin_2839 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 190228..191571 Cyclobacterium marinum DSM 745 11035166 YP_004772177.1 CDS Cycma_0163 NC_015914.1 191693 192733 D KEGG: shg:Sph21_2739 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 191693..192733 Cyclobacterium marinum DSM 745 11035167 YP_004772178.1 CDS Cycma_0164 NC_015914.1 192766 193644 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR006311; KEGG: dfe:Dfer_1406 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Tat (Twin-arginine translocation) pathway signal sequence containing protein; xylose isomerase domain-containing protein 192766..193644 Cyclobacterium marinum DSM 745 11035168 YP_004772179.1 CDS Cycma_0165 NC_015914.1 193752 195074 D KEGG: pbs:Plabr_1908 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 193752..195074 Cyclobacterium marinum DSM 745 11035169 YP_004772180.1 CDS Cycma_0166 NC_015914.1 195210 196700 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(195210..196700) Cyclobacterium marinum DSM 745 11035170 YP_004772181.1 CDS Cycma_0167 NC_015914.1 196757 198292 R InterPro IPR006311; KEGG: ttr:Tter_2682 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(196757..198292) Cyclobacterium marinum DSM 745 11035171 YP_004772182.1 CDS Cycma_0168 NC_015914.1 198349 199899 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: rba:RB12544 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(198349..199899) Cyclobacterium marinum DSM 745 11035172 YP_004772183.1 CDS Cycma_0169 NC_015914.1 200317 201705 R PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR010168; KEGG: lby:Lbys_1236 carboxypeptidase ss1; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase, M20D family; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase complement(200317..201705) Cyclobacterium marinum DSM 745 11035173 YP_004772184.1 CDS Cycma_0170 NC_015914.1 201733 202173 D KEGG: phe:Phep_1693 cytochrome c class I; SPTR: Cytochrome c family protein; hypothetical protein 201733..202173 Cyclobacterium marinum DSM 745 11035174 YP_004772185.1 CDS Cycma_0171 NC_015914.1 202280 203155 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: dfe:Dfer_1886 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 202280..203155 Cyclobacterium marinum DSM 745 11035175 YP_004772186.1 CDS Cycma_0172 NC_015914.1 203492 204679 R PFAM: BNR/Asp-box repeat; KEGG: dfe:Dfer_1899 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(203492..204679) Cyclobacterium marinum DSM 745 11035176 YP_004772187.1 CDS Cycma_0173 NC_015914.1 204722 205732 R KEGG: dfe:Dfer_1902 signal peptide; SPTR: Signal peptide; hypothetical protein complement(204722..205732) Cyclobacterium marinum DSM 745 11035177 YP_004772188.1 CDS Cycma_0174 NC_015914.1 205776 207287 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0172 N-sulfoglucosamine sulfohydrolase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase complement(205776..207287) Cyclobacterium marinum DSM 745 11035178 YP_004772189.1 CDS Cycma_0175 NC_015914.1 207381 208862 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1904 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(207381..208862) Cyclobacterium marinum DSM 745 11035179 YP_004772190.1 CDS Cycma_0176 NC_015914.1 208880 212074 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1905 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor complement(208880..212074) Cyclobacterium marinum DSM 745 11035180 YP_004772191.1 CDS Cycma_0177 NC_015914.1 212400 213842 R KEGG: pmt:PMT0105 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(212400..213842) Cyclobacterium marinum DSM 745 11035181 YP_004772192.1 CDS Cycma_0178 NC_015914.1 213844 215265 R KEGG: pmt:PMT0105 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(213844..215265) Cyclobacterium marinum DSM 745 11035182 YP_004772193.1 CDS Cycma_0179 NC_015914.1 215696 216223 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: dfe:Dfer_4314 transcriptional regulator, LuxR family; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(215696..216223) Cyclobacterium marinum DSM 745 11035183 YP_004772194.1 CDS Cycma_0180 NC_015914.1 216694 219306 R PFAM: carbohydrate binding domain; Glycosyl hydrolase 20, catalytic domain; Glycosyl hydrolase 20, domain 2; Chitobiase/beta-hexosaminidase C-terminal domain; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR004866:IPR015882:IPR015883:IPR004867; KEGG: sli:Slin_6586 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Carbohydrate-binding, chitobiase/hexosaminidase-type, N-terminal; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, C-terminal; SPTR: Beta-N-acetylhexosaminidase; glycoside hydrolase complement(216694..219306) Cyclobacterium marinum DSM 745 11035184 YP_004772195.1 CDS Cycma_0181 NC_015914.1 219383 220480 D PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: sli:Slin_6587 heparan-alpha-glucosaminide N-acetyltransferase; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Heparan-alpha-glucosaminide N-acetyltransferase; hypothetical protein 219383..220480 Cyclobacterium marinum DSM 745 11035185 YP_004772196.1 CDS Cycma_0182 NC_015914.1 220485 222350 D KEGG: gym:GYMC10_3038 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 220485..222350 Cyclobacterium marinum DSM 745 11035186 YP_004772197.1 CDS Cycma_0183 NC_015914.1 222380 223063 R KEGG: fjo:Fjoh_4705 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(222380..223063) Cyclobacterium marinum DSM 745 11035187 YP_004772198.1 CDS Cycma_0184 NC_015914.1 223063 224118 R KEGG: mtt:Ftrac_2248 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(223063..224118) Cyclobacterium marinum DSM 745 11035188 YP_004772199.1 CDS Cycma_0185 NC_015914.1 224564 225142 D PFAM: Thymidine kinase; COGs: COG1435 Thymidine kinase; HAMAP: Thymidine kinase, subgroup; InterPro IPR001267:IPR020634; KEGG: mtt:Ftrac_2246 thymidine kinase; PFAM: Thymidine kinase; SPTR: Thymidine kinase; manually curated; thymidine kinase 224564..225142 Cyclobacterium marinum DSM 745 11035189 YP_004772200.1 CDS Cycma_0186 NC_015914.1 225154 225840 D PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; COGs: COG1381 Recombinational DNA repair protein (RecF pathway); HAMAP: DNA repair protein recO; InterPro IPR003717; KEGG: lby:Lbys_2025 DNA repair protein RecO; PFAM: Recombination protein O, RecO; SPTR: DNA repair protein recO; TIGRFAM: Recombination protein O, RecO; DNA repair protein recO 225154..225840 Cyclobacterium marinum DSM 745 11035190 YP_004772201.1 CDS Cycma_0187 NC_015914.1 225857 226624 R KEGG: zpr:ZPR_3184 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(225857..226624) Cyclobacterium marinum DSM 745 11035191 YP_004772202.1 CDS Cycma_0188 NC_015914.1 226852 227832 D PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3491 Isopenicillin N synthase and related dioxygenase; InterPro IPR005123; KEGG: dfe:Dfer_2706 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 226852..227832 Cyclobacterium marinum DSM 745 11035192 YP_004772203.1 CDS Cycma_0189 NC_015914.1 227842 229050 D PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370:IPR014047; KEGG: sli:Slin_1603 chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter region; SPTR: Chromate transporter, permease component; TIGRFAM: Chromate transporter; chromate transporter 227842..229050 Cyclobacterium marinum DSM 745 11035193 YP_004772204.1 CDS Cycma_0190 NC_015914.1 229101 230315 R KEGG: mtt:Ftrac_2706 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(229101..230315) Cyclobacterium marinum DSM 745 11035194 YP_004772205.1 CDS Cycma_0191 NC_015914.1 230621 230992 D PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bhl:Bache_3007 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; CopY family transcriptional repressor 230621..230992 Cyclobacterium marinum DSM 745 11035195 YP_004772206.1 CDS Cycma_0192 NC_015914.1 231396 231794 R PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; InterPro IPR001486; KEGG: gfo:GFO_1394 globin family protein; PFAM: Globin, truncated bacterial-like; SPTR: Bacterial-like globin family protein; globin complement(231396..231794) Cyclobacterium marinum DSM 745 11035196 YP_004772207.1 CDS Cycma_0193 NC_015914.1 231813 232253 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fjo:Fjoh_2411 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator complement(231813..232253) Cyclobacterium marinum DSM 745 11035197 YP_004772208.1 CDS Cycma_0194 NC_015914.1 232263 232745 R KEGG: gfo:GFO_1402 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(232263..232745) Cyclobacterium marinum DSM 745 11035198 YP_004772209.1 CDS Cycma_0195 NC_015914.1 233069 234070 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: cat:CA2559_09348 probable hydrolytic enzyme; PFAM: Alpha/beta hydrolase fold-1; SPTR: Probable hydrolytic enzyme; alpha/beta hydrolase complement(233069..234070) Cyclobacterium marinum DSM 745 11035199 YP_004772210.1 CDS Cycma_0196 NC_015914.1 234399 235061 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834:IPR006402:IPR006439; KEGG: vex:VEA_000391 2-deoxyglucose-6-phosphate hydrolase YniC; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily hydrolase complement(234399..235061) Cyclobacterium marinum DSM 745 11035200 YP_004772211.1 CDS Cycma_0197 NC_015914.1 235128 235553 R hypothetical protein complement(235128..235553) Cyclobacterium marinum DSM 745 11035201 YP_004772212.1 CDS Cycma_0198 NC_015914.1 235936 237699 R KEGG: psn:Pedsa_0379 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(235936..237699) Cyclobacterium marinum DSM 745 11035202 YP_004772213.1 CDS Cycma_0199 NC_015914.1 237854 239179 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; oxidoreductase domain-containing protein complement(237854..239179) Cyclobacterium marinum DSM 745 11035203 YP_004772214.1 CDS Cycma_0200 NC_015914.1 239355 239924 R PFAM: Uracil DNA glycosylase superfamily; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: fbc:FB2170_06375 hypothetical protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase; uracil-DNA glycosylase complement(239355..239924) Cyclobacterium marinum DSM 745 11035204 YP_004772215.1 CDS Cycma_0201 NC_015914.1 240231 241262 D SPTR: uncharacterized protein; hypothetical protein 240231..241262 Cyclobacterium marinum DSM 745 11035205 YP_004772216.1 CDS Cycma_0202 NC_015914.1 241475 242629 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; transposase IS4 family protein 241475..242629 Cyclobacterium marinum DSM 745 11035206 YP_004772217.1 CDS Cycma_0203 NC_015914.1 242863 245613 R KEGG: dfe:Dfer_5762 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(242863..245613) Cyclobacterium marinum DSM 745 11035207 YP_004772218.1 CDS Cycma_0204 NC_015914.1 246175 247359 D PFAM: Phage integrase; InterPro IPR002104; KEGG: psn:Pedsa_0861 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; integrase 246175..247359 Cyclobacterium marinum DSM 745 11035209 YP_004772219.1 CDS Cycma_0205 NC_015914.1 247363 247533 R hypothetical protein complement(247363..247533) Cyclobacterium marinum DSM 745 11035210 YP_004772220.1 CDS Cycma_0206 NC_015914.1 247546 248004 R hypothetical protein complement(247546..248004) Cyclobacterium marinum DSM 745 11035211 YP_004772221.1 CDS Cycma_0208 NC_015914.1 248753 248911 D hypothetical protein 248753..248911 Cyclobacterium marinum DSM 745 11035213 YP_004772222.1 CDS Cycma_0209 NC_015914.1 249604 250395 R KEGG: ppn:Palpr_3000 exonuclease RNAse t and DNA polymerase III; SPTR: Exonuclease RNase T and DNA polymerase III; hypothetical protein complement(249604..250395) Cyclobacterium marinum DSM 745 11035214 YP_004772223.1 CDS Cycma_0210 NC_015914.1 250837 252006 D PFAM: Serine dehydrogenasease; InterPro IPR002825; KEGG: apb:SAR116_0947 hypothetical protein; PFAM: Protein of unknown function DUF114; SPTR: Periplasmic serine protease (ClpP class)-like protein; hypothetical protein 250837..252006 Cyclobacterium marinum DSM 745 11035215 YP_004772224.1 CDS Cycma_0211 NC_015914.1 252030 252224 D hypothetical protein 252030..252224 Cyclobacterium marinum DSM 745 11035216 YP_004772225.1 CDS Cycma_0212 NC_015914.1 252490 252645 R hypothetical protein complement(252490..252645) Cyclobacterium marinum DSM 745 11035217 YP_004772226.1 CDS Cycma_0213 NC_015914.1 252667 256047 R PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region; InterPro IPR010090; KEGG: shg:Sph21_3463 phage tail tape measure protein, TP901 family; SPTR: Phage tail tape measure protein, TP901 family; TIGRFAM: Phage tail tape measure protein TP901, core region; phage tail tape measure protein, TP901 family complement(252667..256047) Cyclobacterium marinum DSM 745 11035218 YP_004772227.1 CDS Cycma_0214 NC_015914.1 256120 257169 R hypothetical protein complement(256120..257169) Cyclobacterium marinum DSM 745 11035219 YP_004772228.1 CDS Cycma_0215 NC_015914.1 257327 259777 R InterPro IPR006626; KEGG: bgf:BC1003_2955 filamentous hemagglutinin family outer membrane protein; SPTR: All8078 protein; hypothetical protein complement(257327..259777) Cyclobacterium marinum DSM 745 11035220 YP_004772229.1 CDS Cycma_0216 NC_015914.1 259774 260142 R hypothetical protein complement(259774..260142) Cyclobacterium marinum DSM 745 11035221 YP_004772230.1 CDS Cycma_0217 NC_015914.1 260184 260858 R hypothetical protein complement(260184..260858) Cyclobacterium marinum DSM 745 11035222 YP_004772231.1 CDS Cycma_0218 NC_015914.1 260981 263035 R hypothetical protein complement(260981..263035) Cyclobacterium marinum DSM 745 11035223 YP_004772232.1 CDS Cycma_0219 NC_015914.1 263013 267983 R PFAM: Pectate lyase; COGs: COG3866 Pectate lyase; InterPro IPR002022; KEGG: S-layer domain-containing protein; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; SPTR: Cell wall/surface repeat protein; pectate lyase/Amb allergen complement(263013..267983) Cyclobacterium marinum DSM 745 11035224 YP_004772233.1 CDS Cycma_0220 NC_015914.1 268050 268241 R hypothetical protein complement(268050..268241) Cyclobacterium marinum DSM 745 11035225 YP_004772234.1 CDS Cycma_0221 NC_015914.1 268275 268613 R hypothetical protein complement(268275..268613) Cyclobacterium marinum DSM 745 11035226 YP_004772235.1 CDS Cycma_0222 NC_015914.1 268625 268843 R hypothetical protein complement(268625..268843) Cyclobacterium marinum DSM 745 11035227 YP_004772236.1 CDS Cycma_0223 NC_015914.1 268944 269525 R hypothetical protein complement(268944..269525) Cyclobacterium marinum DSM 745 11035228 YP_004772237.1 CDS Cycma_0224 NC_015914.1 269527 269910 R hypothetical protein complement(269527..269910) Cyclobacterium marinum DSM 745 11035229 YP_004772238.1 CDS Cycma_0225 NC_015914.1 270208 270603 R hypothetical protein complement(270208..270603) Cyclobacterium marinum DSM 745 11035230 YP_004772239.1 CDS Cycma_0226 NC_015914.1 270614 271129 R hypothetical protein complement(270614..271129) Cyclobacterium marinum DSM 745 11035231 YP_004772240.1 CDS Cycma_0227 NC_015914.1 271132 271956 R KEGG: shg:Sph21_3465 hypothetical protein; hypothetical protein complement(271132..271956) Cyclobacterium marinum DSM 745 11035232 YP_004772241.1 CDS Cycma_0228 NC_015914.1 271959 272459 R hypothetical protein complement(271959..272459) Cyclobacterium marinum DSM 745 11035233 YP_004772242.1 CDS Cycma_0229 NC_015914.1 272516 272761 R hypothetical protein complement(272516..272761) Cyclobacterium marinum DSM 745 11035234 YP_004772243.1 CDS Cycma_0230 NC_015914.1 272779 273228 R PFAM: Phage lysozyme; COGs: COG3772 Phage-related lysozyme (muraminidase); InterPro IPR002196; KEGG: ipo:Ilyop_2031 lysozyme; PFAM: Glycoside hydrolase, family 24; SPTR: Lysozyme; glycoside hydrolase complement(272779..273228) Cyclobacterium marinum DSM 745 11035235 YP_004772244.1 CDS Cycma_0231 NC_015914.1 273170 273646 R hypothetical protein complement(273170..273646) Cyclobacterium marinum DSM 745 11035236 YP_004772245.1 CDS Cycma_0232 NC_015914.1 273627 273950 R hypothetical protein complement(273627..273950) Cyclobacterium marinum DSM 745 11035237 YP_004772246.1 CDS Cycma_0233 NC_015914.1 273970 274962 R hypothetical protein complement(273970..274962) Cyclobacterium marinum DSM 745 11035238 YP_004772247.1 CDS Cycma_0234 NC_015914.1 274949 276313 R KEGG: shg:Sph21_3471 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(274949..276313) Cyclobacterium marinum DSM 745 11035239 YP_004772248.1 CDS Cycma_0235 NC_015914.1 276307 276597 R hypothetical protein complement(276307..276597) Cyclobacterium marinum DSM 745 11035240 YP_004772249.1 CDS Cycma_0236 NC_015914.1 276921 278546 R KEGG: pru:PRU_0944 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(276921..278546) Cyclobacterium marinum DSM 745 11035241 YP_004772250.1 CDS Cycma_0237 NC_015914.1 278527 279168 R hypothetical protein complement(278527..279168) Cyclobacterium marinum DSM 745 11035242 YP_004772251.1 CDS Cycma_0238 NC_015914.1 279168 279416 R hypothetical protein complement(279168..279416) Cyclobacterium marinum DSM 745 11035243 YP_004772252.1 CDS Cycma_0239 NC_015914.1 279413 280003 R KEGG: bfs:BF2315 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(279413..280003) Cyclobacterium marinum DSM 745 11035244 YP_004772253.1 CDS Cycma_0240 NC_015914.1 280000 281118 R hypothetical protein complement(280000..281118) Cyclobacterium marinum DSM 745 11035245 YP_004772254.1 CDS Cycma_0241 NC_015914.1 281208 281702 R KEGG: lby:Lbys_1053 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(281208..281702) Cyclobacterium marinum DSM 745 11035246 YP_004772255.1 CDS Cycma_0242 NC_015914.1 281716 281850 R hypothetical protein complement(281716..281850) Cyclobacterium marinum DSM 745 11035247 YP_004772256.1 CDS Cycma_0243 NC_015914.1 281921 282163 R hypothetical protein complement(281921..282163) Cyclobacterium marinum DSM 745 11035248 YP_004772257.1 CDS Cycma_0244 NC_015914.1 282438 282566 D hypothetical protein 282438..282566 Cyclobacterium marinum DSM 745 11035249 YP_004772258.1 CDS Cycma_0245 NC_015914.1 282589 283053 R PFAM: Protein of unknown function (DUF2466); COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: bvu:BVU_3185 DNA repair protein; PFAM: DNA repair, RadC-like; SPTR: uncharacterized protein; DNA repair protein RadC complement(282589..283053) Cyclobacterium marinum DSM 745 11035250 YP_004772259.1 CDS Cycma_0246 NC_015914.1 283485 283883 R hypothetical protein complement(283485..283883) Cyclobacterium marinum DSM 745 11035251 YP_004772260.1 CDS Cycma_0247 NC_015914.1 284038 284229 R hypothetical protein complement(284038..284229) Cyclobacterium marinum DSM 745 11035252 YP_004772261.1 CDS Cycma_0248 NC_015914.1 284229 284771 R hypothetical protein complement(284229..284771) Cyclobacterium marinum DSM 745 11035253 YP_004772262.1 CDS Cycma_0249 NC_015914.1 284773 285111 R hypothetical protein complement(284773..285111) Cyclobacterium marinum DSM 745 11035254 YP_004772263.1 CDS Cycma_0250 NC_015914.1 285118 286188 R PFAM: Carbohydrate binding domain; InterPro IPR003610; KEGG: shg:Sph21_3480 hypothetical protein; PFAM: Carbohydrate-binding domain, family 5/12; carbohydrate-binding family V/XII complement(285118..286188) Cyclobacterium marinum DSM 745 11035255 YP_004772264.1 CDS Cycma_0251 NC_015914.1 286217 287458 R PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907; KEGG: shg:Sph21_3481 peptidase S14 ClpP; PFAM: Peptidase S14, ClpP; SPTR: ATP-dependent Clp protease proteolytic subunit; peptidase S14 ClpP complement(286217..287458) Cyclobacterium marinum DSM 745 11035256 YP_004772265.1 CDS Cycma_0252 NC_015914.1 287521 287925 R hypothetical protein complement(287521..287925) Cyclobacterium marinum DSM 745 11035257 YP_004772266.1 CDS Cycma_0253 NC_015914.1 287927 288355 R hypothetical protein complement(287927..288355) Cyclobacterium marinum DSM 745 11035258 YP_004772267.1 CDS Cycma_0254 NC_015914.1 288420 288707 R hypothetical protein complement(288420..288707) Cyclobacterium marinum DSM 745 11035259 YP_004772268.1 CDS Cycma_0255 NC_015914.1 289285 289512 R hypothetical protein complement(289285..289512) Cyclobacterium marinum DSM 745 11035260 YP_004772269.1 CDS Cycma_0256 NC_015914.1 289550 289711 R hypothetical protein complement(289550..289711) Cyclobacterium marinum DSM 745 11035261 YP_004772270.1 CDS Cycma_0257 NC_015914.1 289850 290365 R PFAM: Exonuclease; KEGG: sei:SPC_1272 endodeoxyribonuclease; SPTR: uncharacterized protein; endodeoxyribonuclease complement(289850..290365) Cyclobacterium marinum DSM 745 11035262 YP_004772271.1 CDS Cycma_0258 NC_015914.1 290404 291018 R PFAM: Rad17 cell cycle checkpoint protein; hypothetical protein complement(290404..291018) Cyclobacterium marinum DSM 745 11035263 YP_004772272.1 CDS Cycma_0259 NC_015914.1 291047 291391 R hypothetical protein complement(291047..291391) Cyclobacterium marinum DSM 745 11035264 YP_004772273.1 CDS Cycma_0260 NC_015914.1 291493 291717 R hypothetical protein complement(291493..291717) Cyclobacterium marinum DSM 745 11035265 YP_004772274.1 CDS Cycma_0262 NC_015914.1 292303 292605 R hypothetical protein complement(292303..292605) Cyclobacterium marinum DSM 745 11035267 YP_004772275.1 CDS Cycma_0263 NC_015914.1 292580 292816 R hypothetical protein complement(292580..292816) Cyclobacterium marinum DSM 745 11035268 YP_004772276.1 CDS Cycma_0264 NC_015914.1 292843 293040 R hypothetical protein complement(292843..293040) Cyclobacterium marinum DSM 745 11035269 YP_004772277.1 CDS Cycma_0265 NC_015914.1 293043 293387 R hypothetical protein complement(293043..293387) Cyclobacterium marinum DSM 745 11035270 YP_004772278.1 CDS Cycma_0266 NC_015914.1 293380 293631 R hypothetical protein complement(293380..293631) Cyclobacterium marinum DSM 745 11035271 YP_004772279.1 CDS Cycma_0267 NC_015914.1 293644 295596 R PFAM: C-5 cytosine-specific DNA methylase; COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: pjd:Pjdr2_1600 C-5 cytosine-specific DNA methylase; PFAM: DNA methylase, C-5 cytosine-specific; SPTR: C-5 cytosine-specific DNA methylase; C-5 cytosine-specific DNA methylase complement(293644..295596) Cyclobacterium marinum DSM 745 11035272 YP_004772280.1 CDS Cycma_0268 NC_015914.1 295783 296778 R PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; COGs: COG0207 Thymidylate synthase; InterPro IPR000398; KEGG: mga:MGA_0699 thymidylate synthase; PFAM: Thymidylate synthase, C-terminal; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase, C-terminal; thymidylate synthase complement(295783..296778) Cyclobacterium marinum DSM 745 11035273 YP_004772281.1 CDS Cycma_0269 NC_015914.1 296822 299317 R KEGG: psn:Pedsa_0890 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(296822..299317) Cyclobacterium marinum DSM 745 11035274 YP_004772282.1 CDS Cycma_0270 NC_015914.1 299323 299613 R hypothetical protein complement(299323..299613) Cyclobacterium marinum DSM 745 11035275 YP_004772283.1 CDS Cycma_0271 NC_015914.1 299671 300225 R hypothetical protein complement(299671..300225) Cyclobacterium marinum DSM 745 11035276 YP_004772284.1 CDS Cycma_0272 NC_015914.1 300272 302821 R PFAM: DNA methylase; SNF2 family N-terminal domain; InterPro IPR002941; KEGG: ssm:Spirs_2515 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(300272..302821) Cyclobacterium marinum DSM 745 11035277 YP_004772285.1 CDS Cycma_0273 NC_015914.1 302803 303057 R hypothetical protein complement(302803..303057) Cyclobacterium marinum DSM 745 11035278 YP_004772286.1 CDS Cycma_0274 NC_015914.1 303065 303415 R hypothetical protein complement(303065..303415) Cyclobacterium marinum DSM 745 11035279 YP_004772287.1 CDS Cycma_0275 NC_015914.1 303408 304190 R KEGG: aav:Aave_1738 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(303408..304190) Cyclobacterium marinum DSM 745 11035280 YP_004772288.1 CDS Cycma_0276 NC_015914.1 304183 304704 R KEGG: shg:Sph21_3499 hypothetical protein; SPTR: Metal dependent phosphohydrolase; hypothetical protein complement(304183..304704) Cyclobacterium marinum DSM 745 11035281 YP_004772289.1 CDS Cycma_0277 NC_015914.1 304697 305380 R hypothetical protein complement(304697..305380) Cyclobacterium marinum DSM 745 11035282 YP_004772290.1 CDS Cycma_0278 NC_015914.1 305373 305681 R hypothetical protein complement(305373..305681) Cyclobacterium marinum DSM 745 11035283 YP_004772291.1 CDS Cycma_0279 NC_015914.1 305653 305961 R hypothetical protein complement(305653..305961) Cyclobacterium marinum DSM 745 11035284 YP_004772292.1 CDS Cycma_0280 NC_015914.1 305958 306179 R hypothetical protein complement(305958..306179) Cyclobacterium marinum DSM 745 11035285 YP_004772293.1 CDS Cycma_0281 NC_015914.1 306136 306414 R hypothetical protein complement(306136..306414) Cyclobacterium marinum DSM 745 11035286 YP_004772294.1 CDS Cycma_0282 NC_015914.1 306411 306680 R hypothetical protein complement(306411..306680) Cyclobacterium marinum DSM 745 11035287 YP_004772295.1 CDS Cycma_0283 NC_015914.1 306680 306907 R hypothetical protein complement(306680..306907) Cyclobacterium marinum DSM 745 11035288 YP_004772296.1 CDS Cycma_0284 NC_015914.1 307096 307494 D PFAM: Helix-turn-helix; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 307096..307494 Cyclobacterium marinum DSM 745 11035289 YP_004772297.1 CDS Cycma_0285 NC_015914.1 308053 309651 D PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: psn:Pedsa_2404 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase 308053..309651 Cyclobacterium marinum DSM 745 11035290 YP_004772298.1 CDS Cycma_0287 NC_015914.1 312706 313155 R hypothetical protein complement(312706..313155) Cyclobacterium marinum DSM 745 11035292 YP_004772299.1 CDS Cycma_0288 NC_015914.1 313360 314364 R COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: phe:Phep_2874 ABC transporter permease; SPTR: ABC transporter permease; ABC transporter permease complement(313360..314364) Cyclobacterium marinum DSM 745 11035293 YP_004772300.1 CDS Cycma_0289 NC_015914.1 314361 315329 R PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cpi:Cpin_2549 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; ABC transporter complement(314361..315329) Cyclobacterium marinum DSM 745 11035294 YP_004772301.1 CDS Cycma_0290 NC_015914.1 315337 316194 R PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase; COGs: COG1470 membrane protein; InterPro IPR010317; KEGG: cpi:Cpin_2550 hypothetical protein; PFAM: Protein of unknown function DUF916, cell surface SPTR: uncharacterized protein; hypothetical protein complement(315337..316194) Cyclobacterium marinum DSM 745 11035295 YP_004772302.1 CDS Cycma_0291 NC_015914.1 316448 317275 D PFAM: LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_12311 hypothetical protein; PFAM: LytTr DNA-binding region; SPTR: uncharacterized protein; response regulator receiver protein 316448..317275 Cyclobacterium marinum DSM 745 11035296 YP_004772303.1 CDS Cycma_0292 NC_015914.1 317381 317761 D KEGG: fbc:FB2170_01826 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 317381..317761 Cyclobacterium marinum DSM 745 11035297 YP_004772304.1 CDS Cycma_0293 NC_015914.1 317860 318591 D PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR: uncharacterized protein; hypothetical protein 317860..318591 Cyclobacterium marinum DSM 745 11035298 YP_004772305.1 CDS Cycma_0294 NC_015914.1 318750 319352 D PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR: uncharacterized protein; hypothetical protein 318750..319352 Cyclobacterium marinum DSM 745 11035299 YP_004772306.1 CDS Cycma_0295 NC_015914.1 319511 320110 D PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR: uncharacterized protein; hypothetical protein 319511..320110 Cyclobacterium marinum DSM 745 11035300 YP_004772307.1 CDS Cycma_0296 NC_015914.1 320656 320991 D hypothetical protein 320656..320991 Cyclobacterium marinum DSM 745 11035301 YP_004772308.1 CDS Cycma_0297 NC_015914.1 321154 322392 D KEGG: shg:Sph21_0613 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 321154..322392 Cyclobacterium marinum DSM 745 11035302 YP_004772309.1 CDS Cycma_0298 NC_015914.1 322859 323782 D PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: amu:Amuc_1707 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: metalloenzyme family protein; type I phosphodiesterase/nucleotide pyrophosphatase 322859..323782 Cyclobacterium marinum DSM 745 11035303 YP_004772310.1 CDS Cycma_0299 NC_015914.1 324011 325279 R KEGG: cse:Cseg_3202 hypothetical protein; SPTR: LPS biosynthesis related membrane protein; hypothetical protein complement(324011..325279) Cyclobacterium marinum DSM 745 11035304 YP_004772311.1 CDS Cycma_0300 NC_015914.1 325502 326086 D PFAM: Cupin domain; Helix-turn-helix; InterPro IPR001387:IPR013096; KEGG: shg:Sph21_0215 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: toxin-antitoxin system, antitoxin component, Xre family; helix-turn-helix domain-containing protein 325502..326086 Cyclobacterium marinum DSM 745 11035305 YP_004772312.1 CDS Cycma_0301 NC_015914.1 326099 327172 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: phosphonate catabolism associated alcohol dehydrogenase; COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR013154:IPR013149; KEGG: rba:RB5856 alcohol dehydrogenase, zinc-containing; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 326099..327172 Cyclobacterium marinum DSM 745 11035306 YP_004772313.1 CDS Cycma_0302 NC_015914.1 327242 328399 D PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR017741; KEGG: rba:RB5861 oxidase; PFAM: FAD dependent oxidoreductase; SPTR: uncharacterized protein; TIGRFAM: FAD-dependent oxidoreductase, HpnW; FAD dependent oxidoreductase 327242..328399 Cyclobacterium marinum DSM 745 11035307 YP_004772314.1 CDS Cycma_0303 NC_015914.1 328396 329079 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: rba:RB5862 phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Probable phosphatase; TIGRFAM: phosphonatase-like hydrolase; phosphonatase-like hydrolase 328396..329079 Cyclobacterium marinum DSM 745 11035308 YP_004772315.1 CDS Cycma_0304 NC_015914.1 329246 329989 D KEGG: sli:Slin_2097 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 329246..329989 Cyclobacterium marinum DSM 745 11035309 YP_004772316.1 CDS Cycma_0305 NC_015914.1 330145 331284 R PFAM: Acyltransferase; InterPro IPR002123; KEGG: fjo:Fjoh_1279 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(330145..331284) Cyclobacterium marinum DSM 745 11035310 YP_004772317.1 CDS Cycma_0306 NC_015914.1 331448 332053 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_07880 secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein complement(331448..332053) Cyclobacterium marinum DSM 745 11035311 YP_004772318.1 CDS Cycma_0307 NC_015914.1 332076 333422 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: cpi:Cpin_1059 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(332076..333422) Cyclobacterium marinum DSM 745 11035312 YP_004772319.1 CDS Cycma_0308 NC_015914.1 333645 333983 R hypothetical protein complement(333645..333983) Cyclobacterium marinum DSM 745 11035313 YP_004772320.1 CDS Cycma_0309 NC_015914.1 334319 334975 D PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; COGs: COG0176 Transaldolase; HAMAP: transaldolase; InterPro IPR001585:IPR004731; KEGG: mtt:Ftrac_1407 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase C; transaldolase 334319..334975 Cyclobacterium marinum DSM 745 11035315 YP_004772321.1 CDS Cycma_0310 NC_015914.1 335059 335262 D KEGG: mtt:Ftrac_1408 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 335059..335262 Cyclobacterium marinum DSM 745 11035316 YP_004772322.1 CDS Cycma_0311 NC_015914.1 335264 335977 D PFAM: ABC transporter; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_1409 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Cell-division ATP-binding protein; ABC transporter 335264..335977 Cyclobacterium marinum DSM 745 11035317 YP_004772323.1 CDS Cycma_0312 NC_015914.1 336258 336443 D KEGG: zpr:ZPR_4140 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 336258..336443 Cyclobacterium marinum DSM 745 11035318 YP_004772324.1 CDS Cycma_0313 NC_015914.1 336472 337035 D SPTR: uncharacterized protein; hypothetical protein 336472..337035 Cyclobacterium marinum DSM 745 11035319 YP_004772325.1 CDS Cycma_0314 NC_015914.1 337208 338077 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: ran:Riean_0865 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase oxidoreductase; short-chain dehydrogenase/reductase SDR complement(337208..338077) Cyclobacterium marinum DSM 745 11035320 YP_004772326.1 CDS Cycma_0315 NC_015914.1 338184 339011 D SPTR: uncharacterized protein; hypothetical protein 338184..339011 Cyclobacterium marinum DSM 745 11035321 YP_004772327.1 CDS Cycma_0316 NC_015914.1 339097 340047 R PFAM: Succinylglutamate desuccinylase / Aspartoacylase; COGs: COG3608 deacylase; InterPro IPR007036; KEGG: mtt:Ftrac_0333 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase complement(339097..340047) Cyclobacterium marinum DSM 745 11035322 YP_004772328.1 CDS Cycma_0317 NC_015914.1 340204 341244 D PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR006094:IPR011601:IPR003170; KEGG: dfe:Dfer_3956 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 340204..341244 Cyclobacterium marinum DSM 745 11035323 YP_004772329.1 CDS Cycma_0318 NC_015914.1 341241 341723 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: mtt:Ftrac_0923 cmp/dcmp deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine/deoxycytidylate deaminase; CMP/dCMP deaminase zinc-binding protein complement(341241..341723) Cyclobacterium marinum DSM 745 11035324 YP_004772330.1 CDS Cycma_0319 NC_015914.1 342236 342616 D PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: cao:Celal_1181 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator; response regulator receiver protein 342236..342616 Cyclobacterium marinum DSM 745 11035325 YP_004772331.1 CDS Cycma_0320 NC_015914.1 342792 342965 D hypothetical protein 342792..342965 Cyclobacterium marinum DSM 745 11035326 YP_004772332.1 CDS Cycma_0321 NC_015914.1 343447 343593 D hypothetical protein 343447..343593 Cyclobacterium marinum DSM 745 11035327 YP_004772333.1 CDS Cycma_0322 NC_015914.1 343685 345283 R PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109:IPR005279; KEGG: mtt:Ftrac_0196 amino acid/peptide transporter; PFAM: Oligopeptide transporter; SPTR: Di-/tripeptide transporter; TIGRFAM: Amino acid/peptide transporter; amino acid/peptide transporter complement(343685..345283) Cyclobacterium marinum DSM 745 11035328 YP_004772334.1 CDS Cycma_0323 NC_015914.1 345398 345832 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: ppn:Palpr_0780 peptidyL-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 345398..345832 Cyclobacterium marinum DSM 745 11035329 YP_004772335.1 CDS Cycma_0324 NC_015914.1 345867 347150 R PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: Na+ dependent nucleoside transporter domain-containing protein; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; SPTR: Nucleoside transporter, NupC family; Na+ dependent nucleoside transporter domain-containing protein complement(345867..347150) Cyclobacterium marinum DSM 745 11035330 YP_004772336.1 CDS Cycma_0325 NC_015914.1 347322 347936 R PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729:IPR001943; KEGG: mtt:Ftrac_3401 hypothetical protein; PFAM: Protein of unknown function DUF151; UvrB/UvrC protein; SPTR: UvrB/UvrC protein; hypothetical protein complement(347322..347936) Cyclobacterium marinum DSM 745 11035331 YP_004772337.1 CDS Cycma_0326 NC_015914.1 347943 348908 R PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: mtt:Ftrac_3400 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(347943..348908) Cyclobacterium marinum DSM 745 11035332 YP_004772338.1 CDS Cycma_0327 NC_015914.1 348920 349651 R PFAM: Electron transfer flavoprotein domain; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: mtt:Ftrac_3399 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, beta subunit; electron transfer flavoprotein alpha/beta-subunit complement(348920..349651) Cyclobacterium marinum DSM 745 11035333 YP_004772339.1 CDS Cycma_0328 NC_015914.1 349704 350036 D KEGG: mtt:Ftrac_3398 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 349704..350036 Cyclobacterium marinum DSM 745 11035334 YP_004772340.1 CDS Cycma_0329 NC_015914.1 350033 351619 R PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR007692; KEGG: mtt:Ftrac_0118 primary replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SPTR: Replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; replicative DNA helicase complement(350033..351619) Cyclobacterium marinum DSM 745 11035335 YP_004772341.1 CDS Cycma_0330 NC_015914.1 352258 353061 D PFAM: Exonuclease; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR013520; KEGG: mtt:Ftrac_0120 exonuclease RNAse t and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: Exonuclease; exonuclease RNase T and DNA polymerase III 352258..353061 Cyclobacterium marinum DSM 745 11035336 YP_004772342.1 CDS Cycma_0331 NC_015914.1 353172 353726 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: sli:Slin_1326 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 353172..353726 Cyclobacterium marinum DSM 745 11035337 YP_004772343.1 CDS Cycma_0332 NC_015914.1 353736 354740 R PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789:IPR000014; KEGG: mtt:Ftrac_2272 pas/pac sensor protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor protein; TIGRFAM: PAS; PAS/PAC sensor protein complement(353736..354740) Cyclobacterium marinum DSM 745 11035338 YP_004772344.1 CDS Cycma_0333 NC_015914.1 354745 355176 R PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: mtt:Ftrac_2273 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; response regulator receiver protein complement(354745..355176) Cyclobacterium marinum DSM 745 11035339 YP_004772345.1 CDS Cycma_0334 NC_015914.1 355617 356576 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003594; KEGG: mac:MA1270 sensory transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(355617..356576) Cyclobacterium marinum DSM 745 11035340 YP_004772346.1 CDS Cycma_0335 NC_015914.1 356897 357832 D PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fbc:FB2170_09421 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein 356897..357832 Cyclobacterium marinum DSM 745 11035341 YP_004772347.1 CDS Cycma_0336 NC_015914.1 357835 359166 R PFAM: MatE; TIGRFAM: efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mtt:Ftrac_0636 mate efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(357835..359166) Cyclobacterium marinum DSM 745 11035342 YP_004772348.1 CDS Cycma_0337 NC_015914.1 359309 360763 R PFAM: nucleotidyltransferase substrate binding domain; CBS domain; nucleotidyltransferase DUF294; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644:IPR005105:IPR018821; KEGG: psn:Pedsa_1073 CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase ; Cystathionine beta-synthase, core; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; signal transduction protein with CBS domains complement(359309..360763) Cyclobacterium marinum DSM 745 11035343 YP_004772349.1 CDS Cycma_0338 NC_015914.1 361200 363980 R PFAM: Aconitase C-terminal domain; Aconitase (aconitate hydratase); TIGRFAM: aconitate hydratase 1; COGs: COG1048 Aconitase A; InterPro IPR001030:IPR000573:IPR006249; KEGG: gfo:GFO_1390 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: Aconitate hydratase 1; TIGRFAM: Aconitase/iron regulatory protein 2; aconitate hydratase 1 complement(361200..363980) Cyclobacterium marinum DSM 745 11035346 YP_004772350.1 CDS Cycma_0339 NC_015914.1 364118 365092 R PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: phe:Phep_0795 mammalian cell entry related domain-containing protein; PFAM: Mammalian cell entry related; SPTR: ABC transporter, permease component; mammalian cell entry related domain-containing protein complement(364118..365092) Cyclobacterium marinum DSM 745 11035347 YP_004772351.1 CDS Cycma_0340 NC_015914.1 365089 365841 R PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593:IPR003439; KEGG: psn:Pedsa_2788 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter complement(365089..365841) Cyclobacterium marinum DSM 745 11035348 YP_004772352.1 CDS Cycma_0341 NC_015914.1 365843 366640 R PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sli:Slin_1812 hypothetical protein; PFAM: Protein of unknown function DUF140; SPTR: ABC transporter, permease; hypothetical protein complement(365843..366640) Cyclobacterium marinum DSM 745 11035349 YP_004772353.1 CDS Cycma_0342 NC_015914.1 366694 367065 R PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: chu:CHU_3216 two-component response regulator, CheY-like; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: uncharacterized protein; response regulator receiver protein complement(366694..367065) Cyclobacterium marinum DSM 745 11035350 YP_004772354.1 CDS Cycma_0343 NC_015914.1 367546 370419 R PFAM: Exodeoxyribonuclease V, gamma subunit; KEGG: pdi:BDI_1187 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(367546..370419) Cyclobacterium marinum DSM 745 11035351 YP_004772355.1 CDS Cycma_0344 NC_015914.1 370420 373632 R PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: pdi:BDI_2571 ATP-dependent helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase domain protein; UvrD/REP helicase complement(370420..373632) Cyclobacterium marinum DSM 745 11035352 YP_004772356.1 CDS Cycma_0345 NC_015914.1 373798 374574 D PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Membrane protein; hypothetical protein 373798..374574 Cyclobacterium marinum DSM 745 11035353 YP_004772357.1 CDS Cycma_0346 NC_015914.1 374593 375051 R PFAM: CBS domain; COGs: COG0517 FOG: CBS domain; InterPro IPR000644; KEGG: mtt:Ftrac_2573 cbs domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: PolyA polymerase; hypothetical protein complement(374593..375051) Cyclobacterium marinum DSM 745 11035354 YP_004772358.1 CDS Cycma_0347 NC_015914.1 375316 376065 R PFAM: CutC family; COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: pon:100444760 copper homeostasis protein cutC homolog; PFAM: CutC; SPTR: Copper homeostasis protein CutC; CutC family protein complement(375316..376065) Cyclobacterium marinum DSM 745 11035355 YP_004772359.1 CDS Cycma_0348 NC_015914.1 376080 377072 R PFAM: Asparaginase; COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: saz:Sama_0299 asparaginase; PFAM: Peptidase T2, asparaginase 2; SPTR:N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginas e; peptidase T2 asparaginase 2 complement(376080..377072) Cyclobacterium marinum DSM 745 11035356 YP_004772360.1 CDS Cycma_0349 NC_015914.1 377353 378597 D PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: zpr:ZPR_4698 ROK family transcriptional repressor protein; PFAM: ROK; SPTR: glucokinase; ROK family protein 377353..378597 Cyclobacterium marinum DSM 745 11035357 YP_004772361.1 CDS Cycma_0350 NC_015914.1 378624 380951 D PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: ppn:Palpr_2723 glucosamine/galactosamine-6-phosphate isomerase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: glucosamine-6-phosphate isomerase 2; glucosamine/galactosamine-6-phosphate isomerase 378624..380951 Cyclobacterium marinum DSM 745 11035358 YP_004772362.1 CDS Cycma_0351 NC_015914.1 381075 382010 D PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: bfr:BF1751 transcriptional regulator; PFAM: ROK; SPTR: ROK family protein; ROK family protein 381075..382010 Cyclobacterium marinum DSM 745 11035359 YP_004772363.1 CDS Cycma_0352 NC_015914.1 382365 383741 D PFAM: PAP2 superfamily; KEGG: hypothetical protein; SPTR: phosphoesterase, PA-phosphatase related protein; hypothetical protein 382365..383741 Cyclobacterium marinum DSM 745 11035360 YP_004772364.1 CDS Cycma_0353 NC_015914.1 383743 384312 R PFAM: Protein of unknown function (DUF1349); COGs: COG3506 conserved hypothetical protein; InterPro IPR009784; KEGG: cpi:Cpin_1749 hypothetical protein; PFAM: Protein of unknown function DUF1349; SPTR: uncharacterized protein; hypothetical protein complement(383743..384312) Cyclobacterium marinum DSM 745 11035361 YP_004772365.1 CDS Cycma_0355 NC_015914.1 386018 386743 R KEGG: zpr:ZPR_1636 aminotransferase class IV family protein; SPTR: Aminotransferase class IV family protein; class IV aminotransferase complement(386018..386743) Cyclobacterium marinum DSM 745 11035363 YP_004772366.1 CDS Cycma_0356 NC_015914.1 386749 387660 R PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: zpr:ZPR_1637 aminotransferase, class IV superfamily; PFAM: Aminotransferase, class IV; SPTR: Aminotransferase, class IV superfamily; class IV aminotransferase complement(386749..387660) Cyclobacterium marinum DSM 745 11035364 YP_004772367.1 CDS Cycma_0357 NC_015914.1 387714 388829 R PFAM: Kelch motif; InterPro IPR006652; KEGG: dfe:Dfer_4451 kelch repeat-containing protein; PFAM: Kelch repeat type 1; SPTR: Kelch repeat-containing protein; Kelch repeat type 1-containing protein complement(387714..388829) Cyclobacterium marinum DSM 745 11035365 YP_004772368.1 CDS Cycma_0358 NC_015914.1 389016 389693 D hypothetical protein 389016..389693 Cyclobacterium marinum DSM 745 11035366 YP_004772369.1 CDS Cycma_0359 NC_015914.1 389701 390993 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR004450; KEGG: chu:CHU_0075 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; threonine synthase complement(389701..390993) Cyclobacterium marinum DSM 745 11035367 YP_004772370.1 CDS Cycma_0360 NC_015914.1 391019 391963 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase; COGs: COG0083 Homoserine kinase; HAMAP: Homoserine kinase; InterPro IPR006204:IPR013750:IPR000870; KEGG: chu:CHU_0074 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: Homoserine kinase; TIGRFAM: Homoserine kinase; homoserine kinase complement(391019..391963) Cyclobacterium marinum DSM 745 11035368 YP_004772371.1 CDS Cycma_0361 NC_015914.1 391965 394412 R PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; COGs: COG0527 Aspartokinase; InterProIPR001048:IPR002912:IPR005106:IPR001342:IPR 001341; KEGG: chu:CHU_0073 bifunctional aspartokinase I/homoserine dehydrogenase I; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding; SPTR: Aspartokinase I/homoserine dehydrogenase, threonine-sensitive; TIGRFAM: Aspartate kinase region; aspartate kinase complement(391965..394412) Cyclobacterium marinum DSM 745 11035369 YP_004772372.1 CDS Cycma_0362 NC_015914.1 394980 395663 R PFAM: Protein of unknown function (DUF2807); KEGG: mtt:Ftrac_2798 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(394980..395663) Cyclobacterium marinum DSM 745 11035370 YP_004772373.1 CDS Cycma_0363 NC_015914.1 395684 396421 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: mtt:Ftrac_2838 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: oxidoreductase, short chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(395684..396421) Cyclobacterium marinum DSM 745 11035371 YP_004772374.1 CDS Cycma_0364 NC_015914.1 396450 397334 D PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: shg:Sph21_3444 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel protein MscS 396450..397334 Cyclobacterium marinum DSM 745 11035372 YP_004772375.1 CDS Cycma_0365 NC_015914.1 397321 397656 D PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: cao:Celal_1010 methylated-DNA/protein-cysteinemethyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 397321..397656 Cyclobacterium marinum DSM 745 11035373 YP_004772376.1 CDS Cycma_0366 NC_015914.1 397955 398665 D PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: Undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Capsular polysaccharide biosynthesis protein; sugar transferase 397955..398665 Cyclobacterium marinum DSM 745 11035374 YP_004772377.1 CDS Cycma_0367 NC_015914.1 398764 400218 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: mtt:Ftrac_2951 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Sodium:solute symporter family protein; Na+/solute symporter complement(398764..400218) Cyclobacterium marinum DSM 745 11035375 YP_004772378.1 CDS Cycma_0368 NC_015914.1 400272 400559 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; InterPro IPR003769; KEGG: chu:CHU_1046 hypothetical protein; PFAM: Adaptor protein ClpS, core; SPTR: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 400272..400559 Cyclobacterium marinum DSM 745 11035376 YP_004772379.1 CDS Cycma_0369 NC_015914.1 400572 401192 D PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: Recombination protein recR; InterPro IPR006154:IPR015967:IPR000093; KEGG: chu:CHU_1045 recombination protein RecR; SMART: Toprim domain, subgroup; SPTR: Recombination protein recR; TIGRFAM: RecR protein; recombination protein recR 400572..401192 Cyclobacterium marinum DSM 745 11035377 YP_004772380.1 CDS Cycma_0370 NC_015914.1 401542 405117 D KEGG: vcn:VOLCADRAFT_88866 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 401542..405117 Cyclobacterium marinum DSM 745 11035379 YP_004772381.1 CDS Cycma_0371 NC_015914.1 405203 406366 R KEGG: psn:Pedsa_2377 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(405203..406366) Cyclobacterium marinum DSM 745 11035380 YP_004772382.1 CDS Cycma_0372 NC_015914.1 406426 407736 R PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR006638:IPR013848:IPR007197:IPR002792:IPR 005839:IPR005840; KEGG: mtt:Ftrac_1929 SSU ribosomal protein s12p methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; 30S ribosomal protein S12 methylthiotransferase complement(406426..407736) Cyclobacterium marinum DSM 745 11035381 YP_004772383.1 CDS Cycma_0373 NC_015914.1 408203 408847 D PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254:IPR005744; KEGG: mtt:Ftrac_0863 channel protein, hemolysin III family; PFAM: Hly-III related; SPTR: Channel protein, hemolysin III family; TIGRFAM: HylII; hemolysin III family channel protein 408203..408847 Cyclobacterium marinum DSM 745 11035382 YP_004772384.1 CDS Cycma_0374 NC_015914.1 409835 410227 D PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: mtt:Ftrac_2587 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR: uncharacterized protein; hypothetical protein 409835..410227 Cyclobacterium marinum DSM 745 11035383 YP_004772385.1 CDS Cycma_0375 NC_015914.1 410285 410956 R PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433; KEGG: mtt:Ftrac_2837 oxidoreductase fad/nad(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; SPTR: flavodoxin reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(410285..410956) Cyclobacterium marinum DSM 745 11035384 YP_004772386.1 CDS Cycma_0376 NC_015914.1 411257 412924 D KEGG: psl:Psta_1030 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein 411257..412924 Cyclobacterium marinum DSM 745 11035385 YP_004772387.1 CDS Cycma_0377 NC_015914.1 412925 413776 R PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: gfo:GFO_2628 carboxylesterase; SPTR: Esterase/lipase/thioesterase; carboxylesterase complement(412925..413776) Cyclobacterium marinum DSM 745 11035386 YP_004772388.1 CDS Cycma_0378 NC_015914.1 413935 415065 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fba:FIC_01942 4-keto.6-deoxy-N-acetyl-D-hexosaminyl-(lipid carrier) aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: 4-keto.6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 413935..415065 Cyclobacterium marinum DSM 745 11035387 YP_004772389.1 CDS Cycma_0379 NC_015914.1 415339 416985 R PFAM: Phosphoglucose isomerase; COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: vex:VEA_002341 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(415339..416985) Cyclobacterium marinum DSM 745 11035388 YP_004772390.1 CDS Cycma_0380 NC_015914.1 417667 419784 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003594:IPR001440:IPR013105; KEGG: cao:Celal_4238 histidine kinase; PFAM: ATP-binding region, ATPase-like; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; SPTR: Histidine kinase; multi-sensor signal transduction histidine kinase 417667..419784 Cyclobacterium marinum DSM 745 11035389 YP_004772391.1 CDS Cycma_0381 NC_015914.1 420083 420724 D KEGG: rbi:RB2501_00566 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 420083..420724 Cyclobacterium marinum DSM 745 11035390 YP_004772392.1 CDS Cycma_0382 NC_015914.1 420730 422211 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR019900; KEGG: bth:BT_2813 sodium-dependent multivitamin transporter; PFAM: Sodium/solute symporter; SPTR: Sodium-dependent multivitamin transporter; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(420730..422211) Cyclobacterium marinum DSM 745 11035391 YP_004772393.1 CDS Cycma_0383 NC_015914.1 422326 423258 R PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220; KEGG: bth:BT_2814 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(422326..423258) Cyclobacterium marinum DSM 745 11035392 YP_004772394.1 CDS Cycma_0384 NC_015914.1 423319 424467 R PFAM: BNR/Asp-box repeat; COGs: COG4692 neuraminidase (sialidase); KEGG: lby:Lbys_1885 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(423319..424467) Cyclobacterium marinum DSM 745 11035393 YP_004772395.1 CDS Cycma_0385 NC_015914.1 424490 426085 R PFAM: L-fucose isomerase, C-terminal domain; InterPro IPR012889; KEGG: psn:Pedsa_1485 L-fucose isomerase 2 domain protein; PFAM: L-fucose isomerase, N-terminal-2; SPTR: L-fucose isomerase 2 domain protein; L-fucose isomerase complement(424490..426085) Cyclobacterium marinum DSM 745 11035394 YP_004772396.1 CDS Cycma_0386 NC_015914.1 426217 427449 R KEGG: pbs:Plabr_3930 FG-GAP repeat protein; SPTR: uncharacterized protein; hypothetical protein complement(426217..427449) Cyclobacterium marinum DSM 745 11035395 YP_004772397.1 CDS Cycma_0387 NC_015914.1 427454 428623 R PFAM: BNR/Asp-box repeat; Glycosyl hydrolases family 43; KEGG: rba:RB5143 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(427454..428623) Cyclobacterium marinum DSM 745 11035396 YP_004772398.1 CDS Cycma_0388 NC_015914.1 428779 430146 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: dfe:Dfer_3162 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 428779..430146 Cyclobacterium marinum DSM 745 11035397 YP_004772399.1 CDS Cycma_0389 NC_015914.1 430143 431252 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 430143..431252 Cyclobacterium marinum DSM 745 11035398 YP_004772400.1 CDS Cycma_0390 NC_015914.1 431385 432851 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: rbi:RB2501_09095 dehydrogenase-like protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; oxidoreductase domain-containing protein complement(431385..432851) Cyclobacterium marinum DSM 745 11035399 YP_004772401.1 CDS Cycma_0391 NC_015914.1 433023 433274 R PFAM: Uncharacterized conserved protein (DUF2132); COGs: COG4628 conserved hypothetical protein; InterPro IPR018668; KEGG: cat:CA2559_03420 hypothetical protein; PFAM: Protein of unknown function DUF2132; SPTR: uncharacterized protein; hypothetical protein complement(433023..433274) Cyclobacterium marinum DSM 745 11035400 YP_004772402.1 CDS Cycma_0392 NC_015914.1 433546 434085 D KEGG: shg:Sph21_0206 metal-dependent hydrolase; SPTR: uncharacterized protein; metal-dependent hydrolase 433546..434085 Cyclobacterium marinum DSM 745 11035401 YP_004772403.1 CDS Cycma_0393 NC_015914.1 434149 434832 R hypothetical protein complement(434149..434832) Cyclobacterium marinum DSM 745 11035402 YP_004772404.1 CDS Cycma_0394 NC_015914.1 435022 435561 R PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: dsy:DSY0022 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: uncharacterized protein; N-acetyltransferase GCN5 complement(435022..435561) Cyclobacterium marinum DSM 745 11035403 YP_004772405.1 CDS Cycma_0395 NC_015914.1 435620 435727 R hypothetical protein complement(435620..435727) Cyclobacterium marinum DSM 745 11035404 YP_004772406.1 CDS Cycma_0396 NC_015914.1 435696 435974 R hypothetical protein complement(435696..435974) Cyclobacterium marinum DSM 745 11035405 YP_004772407.1 CDS Cycma_0397 NC_015914.1 436053 436472 R KEGG: osp:Odosp_0933 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(436053..436472) Cyclobacterium marinum DSM 745 11035406 YP_004772408.1 CDS Cycma_0398 NC_015914.1 437234 438553 D PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: sua:Saut_1329 amino acid permease-associated region; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease-associated region; amino acid permease 437234..438553 Cyclobacterium marinum DSM 745 11035407 YP_004772409.1 CDS Cycma_0399 NC_015914.1 438842 439630 D KEGG: Thioredoxin domain-containing protein; SPTR: Thioredoxin (TrxA); hypothetical protein 438842..439630 Cyclobacterium marinum DSM 745 11035408 YP_004772410.1 CDS Cycma_0400 NC_015914.1 439868 444724 D PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; Viral (Superfamily 1) RNA helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR000212:IPR 018329; KEGG: dsy:DSY0682 hypothetical protein; PFAM: DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA helicase, UvrD/REP type; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; ATP-dependent DNA helicase RecQ 439868..444724 Cyclobacterium marinum DSM 745 11035409 YP_004772411.1 CDS Cycma_0401 NC_015914.1 444776 445954 R KEGG: pbs:Plabr_3895 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(444776..445954) Cyclobacterium marinum DSM 745 11035410 YP_004772412.1 CDS Cycma_0402 NC_015914.1 445997 446446 R PFAM: YhhN-like protein; InterPro IPR012506; KEGG: fbc:FB2170_12086 hypothetical protein; PFAM: YhhN-like; SPTR: uncharacterized protein; hypothetical protein complement(445997..446446) Cyclobacterium marinum DSM 745 11035411 YP_004772413.1 CDS Cycma_0403 NC_015914.1 447228 447722 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: swd:Swoo_1191 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: uncharacterized protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(447228..447722) Cyclobacterium marinum DSM 745 11035412 YP_004772414.1 CDS Cycma_0404 NC_015914.1 447794 448609 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; InterPro IPR018060:IPR000005; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: uncharacterized protein; AraC family transcriptional regulator complement(447794..448609) Cyclobacterium marinum DSM 745 11035413 YP_004772415.1 CDS Cycma_0405 NC_015914.1 449659 450111 R KEGG: psn:Pedsa_1227 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(449659..450111) Cyclobacterium marinum DSM 745 11035414 YP_004772416.1 CDS Cycma_0406 NC_015914.1 450142 451434 R PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865:IPR000994; KEGG: mtt:Ftrac_3610 peptidase M24; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; SPTR: Xaa-Pro aminopeptidase; peptidase M24 complement(450142..451434) Cyclobacterium marinum DSM 745 11035415 YP_004772417.1 CDS Cycma_0407 NC_015914.1 451566 451829 R KEGG: pat:Patl_3588 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(451566..451829) Cyclobacterium marinum DSM 745 11035416 YP_004772418.1 CDS Cycma_0408 NC_015914.1 452174 452959 R PFAM: Amidohydrolase; KEGG: phe:Phep_0340 amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(452174..452959) Cyclobacterium marinum DSM 745 11035417 YP_004772419.1 CDS Cycma_0409 NC_015914.1 452946 453854 R PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0338 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(452946..453854) Cyclobacterium marinum DSM 745 11035418 YP_004772420.1 CDS Cycma_0410 NC_015914.1 453936 456593 R PFAM: Heparinase II/III-like protein; KEGG: phe:Phep_2409 heparinase II/III family protein; SPTR: Heparinase II/III family protein; hypothetical protein complement(453936..456593) Cyclobacterium marinum DSM 745 11035419 YP_004772421.1 CDS Cycma_0411 NC_015914.1 456645 458021 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: dfe:Dfer_4491 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(456645..458021) Cyclobacterium marinum DSM 745 11035420 YP_004772422.1 CDS Cycma_0412 NC_015914.1 458018 459424 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: sli:Slin_0602 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(458018..459424) Cyclobacterium marinum DSM 745 11035421 YP_004772423.1 CDS Cycma_0413 NC_015914.1 459726 461483 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1389 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(459726..461483) Cyclobacterium marinum DSM 745 11035422 YP_004772424.1 CDS Cycma_0414 NC_015914.1 461512 464739 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1390 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(461512..464739) Cyclobacterium marinum DSM 745 11035423 YP_004772425.1 CDS Cycma_0415 NC_015914.1 466023 466583 R hypothetical protein complement(466023..466583) Cyclobacterium marinum DSM 745 11035424 YP_004772426.1 CDS Cycma_0416 NC_015914.1 467184 468098 D KEGG: cpi:Cpin_2490 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 467184..468098 Cyclobacterium marinum DSM 745 11035425 YP_004772427.1 CDS Cycma_0417 NC_015914.1 468335 468640 D PFAM: Protein of unknown function (DUF2442); InterPro IPR018841; KEGG: mtt:Ftrac_3780 hypothetical protein; PFAM: Protein of unknown function DUF2442; SPTR: uncharacterized protein; hypothetical protein 468335..468640 Cyclobacterium marinum DSM 745 11035426 YP_004772428.1 CDS Cycma_0418 NC_015914.1 468835 469980 R PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: psn:Pedsa_1010 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Membrane protein; hypothetical protein complement(468835..469980) Cyclobacterium marinum DSM 745 11035427 YP_004772429.1 CDS Cycma_0419 NC_015914.1 470484 470657 D hypothetical protein 470484..470657 Cyclobacterium marinum DSM 745 11035428 YP_004772430.1 CDS Cycma_0420 NC_015914.1 470878 471390 R PFAM: Mannose-6-phosphate isomerase; KEGG: phe:Phep_3485 hypothetical protein; SPTR: ATP phosphoribosyltransferase; hypothetical protein complement(470878..471390) Cyclobacterium marinum DSM 745 11035429 YP_004772431.1 CDS Cycma_0421 NC_015914.1 471461 472318 R PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: shg:Sph21_0724 ROK family protein; PFAM: ROK; SPTR: ROK family member transcriptional repressor; ROK family protein complement(471461..472318) Cyclobacterium marinum DSM 745 11035430 YP_004772432.1 CDS Cycma_0422 NC_015914.1 472335 473873 R KEGG: mtt:Ftrac_0883 outer membrane lipoprotein P61; SPTR: uncharacterized protein; hypothetical protein complement(472335..473873) Cyclobacterium marinum DSM 745 11035431 YP_004772433.1 CDS Cycma_0423 NC_015914.1 473943 474161 D PFAM: PspC domain; KEGG: sli:Slin_6388 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 473943..474161 Cyclobacterium marinum DSM 745 11035432 YP_004772434.1 CDS Cycma_0424 NC_015914.1 474158 475168 R PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mtt:Ftrac_1517 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; family 2 glycosyl transferase complement(474158..475168) Cyclobacterium marinum DSM 745 11035433 YP_004772435.1 CDS Cycma_0425 NC_015914.1 475168 475500 R PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; COGs: COG0718 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: mtt:Ftrac_1516 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein ALPR1_06800; TIGRFAM: Uncharacterised protein family UPF0133; hypothetical protein complement(475168..475500) Cyclobacterium marinum DSM 745 11035434 YP_004772436.1 CDS Cycma_0426 NC_015914.1 475628 477004 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR002314:IPR004154:IPR015807; KEGG: lby:Lbys_0603 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; manually curated; histidyl-tRNA synthetase complement(475628..477004) Cyclobacterium marinum DSM 745 11035435 YP_004772437.1 CDS Cycma_0427 NC_015914.1 477171 477320 D KEGG: mtt:Ftrac_0857 hypothetical protein; hypothetical protein 477171..477320 Cyclobacterium marinum DSM 745 11035436 YP_004772438.1 CDS Cycma_0428 NC_015914.1 477356 477856 R TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: wvi:Weevi_1546 phosphodiesterase, MJ0936 family; PFAM: Metallophosphoesterase; SPTR: Phosphoesterase, subfamily; TIGRFAM: Uncharacterised protein family UPF0025; phosphodiesterase complement(477356..477856) Cyclobacterium marinum DSM 745 11035437 YP_004772439.1 CDS Cycma_0429 NC_015914.1 478158 479138 D PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR005476; KEGG: lby:Lbys_1402 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: Pyruvate dehydrogenase complex, E1 component, beta subunit; transketolase central region 478158..479138 Cyclobacterium marinum DSM 745 11035438 YP_004772440.1 CDS Cycma_0430 NC_015914.1 479284 480621 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; COGs: COG0541 Signal recognition particle GTPase; InterProIPR003593:IPR013822:IPR000897:IPR004125:IPR 004780; KEGG: mtt:Ftrac_0395 signal recognition particle subunit ffh/SRP54 (SRP54); PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; signal recognition particle protein complement(479284..480621) Cyclobacterium marinum DSM 745 11035439 YP_004772441.1 CDS Cycma_0431 NC_015914.1 480894 481388 D hypothetical protein 480894..481388 Cyclobacterium marinum DSM 745 11035440 YP_004772442.1 CDS Cycma_0432 NC_015914.1 481817 486184 D PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: ran:Riean_0183 hypothetical protein; PFAM: Protein of unknown function DUF11; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF11; hypothetical protein 481817..486184 Cyclobacterium marinum DSM 745 11035441 YP_004772443.1 CDS Cycma_0433 NC_015914.1 486188 487162 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: phe:Phep_0108 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 486188..487162 Cyclobacterium marinum DSM 745 11035442 YP_004772444.1 CDS Cycma_0434 NC_015914.1 487432 489156 R PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645:IPR001902; KEGG: rbi:RB2501_07240 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter; TIGRFAM: Sulphate anion transporter; sulfate transporter complement(487432..489156) Cyclobacterium marinum DSM 745 11035443 YP_004772445.1 CDS Cycma_0435 NC_015914.1 489663 490325 D PFAM: NAD dependent epimerase/dehydratase; KEGG: cao:Celal_4039 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 489663..490325 Cyclobacterium marinum DSM 745 11035444 YP_004772446.1 CDS Cycma_0436 NC_015914.1 490564 493002 D InterPro IPR018580; KEGG: mtt:Ftrac_3796 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Membrane protein; hypothetical protein 490564..493002 Cyclobacterium marinum DSM 745 11035445 YP_004772447.1 CDS Cycma_0437 NC_015914.1 492995 494041 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abi:Aboo_0277 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; group 1 glycosyl transferase 492995..494041 Cyclobacterium marinum DSM 745 11035446 YP_004772448.1 CDS Cycma_0438 NC_015914.1 494057 494905 D PFAM: Vibrio cholerae RfbT protein; TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: smt:Smal_3172 FkbM family methyltransferase; SPTR: Methyltransferase FkbM family; TIGRFAM: Methyltransferase FkbM; FkbM family methyltransferase 494057..494905 Cyclobacterium marinum DSM 745 11035447 YP_004772449.1 CDS Cycma_0439 NC_015914.1 494906 497863 R PFAM: PKD domain; InterPro IPR000601; KEGG: cao:Celal_1478 hypothetical protein; PFAM: PKD; SMART: PKD; SPTR: Lipoprotein; PKD domain-containing protein complement(494906..497863) Cyclobacterium marinum DSM 745 11035448 YP_004772450.1 CDS Cycma_0440 NC_015914.1 498065 499552 D PFAM: Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: chu:CHU_2768 membrane export protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 498065..499552 Cyclobacterium marinum DSM 745 11035449 YP_004772451.1 CDS Cycma_0441 NC_015914.1 499678 500268 R KEGG: fbc:FB2170_06740 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(499678..500268) Cyclobacterium marinum DSM 745 11035450 YP_004772452.1 CDS Cycma_0443 NC_015914.1 500799 500963 D hypothetical protein 500799..500963 Cyclobacterium marinum DSM 745 11035452 YP_004772453.1 CDS Cycma_0444 NC_015914.1 501108 502394 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_1324 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase complement(501108..502394) Cyclobacterium marinum DSM 745 11035453 YP_004772454.1 CDS Cycma_0445 NC_015914.1 502442 503908 R PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804:IPR014273; KEGG: tra:Trad_1633 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; SPTR: Isocitrate dehydrogenase; TIGRFAM: Isocitrate dehydrogenase bacteria; isocitrate dehydrogenase complement(502442..503908) Cyclobacterium marinum DSM 745 11035454 YP_004772455.1 CDS Cycma_0446 NC_015914.1 504331 505116 D PFAM: Enoyl-CoA hydratase/isomerase; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: mtt:Ftrac_3324 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase 504331..505116 Cyclobacterium marinum DSM 745 11035455 YP_004772456.1 CDS Cycma_0447 NC_015914.1 505129 506646 D KEGG: aas:Aasi_0804 hypothetical protein; SPTR: Polysaccharide biosynthesis protein; hypothetical protein 505129..506646 Cyclobacterium marinum DSM 745 11035456 YP_004772457.1 CDS Cycma_0448 NC_015914.1 506648 507079 D PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); COGs: COG0756 dUTPase; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; InterPro IPR008180:IPR008181; KEGG: mtt:Ftrac_3326 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1; deoxyuridine 5'-triphosphate nucleotidohydrolase 506648..507079 Cyclobacterium marinum DSM 745 11035457 YP_004772458.1 CDS Cycma_0449 NC_015914.1 507293 509038 D PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440:IPR013105; KEGG: dfe:Dfer_3772 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: uncharacterized protein; hypothetical protein 507293..509038 Cyclobacterium marinum DSM 745 11035458 YP_004772459.1 CDS Cycma_0450 NC_015914.1 509031 509774 D KEGG: dfe:Dfer_3773 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 509031..509774 Cyclobacterium marinum DSM 745 11035459 YP_004772460.1 CDS Cycma_0451 NC_015914.1 509743 511029 D PFAM: Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_3330 peptidase M23; PFAM: Peptidase M23; SPTR: M23 peptidase domain protein; peptidase M23 509743..511029 Cyclobacterium marinum DSM 745 11035460 YP_004772461.1 CDS Cycma_0452 NC_015914.1 511143 511352 D PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; COGs: COG1826 Sec-independent protein secretion pathway components; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR003369:IPR006312; KEGG: chu:CHU_0024 sec-independent protein translocase; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase tatA/E homolog; TIGRFAM: Twin-arginine translocation protein TatA/E; Sec-independent protein translocase tatA/E-like protein 511143..511352 Cyclobacterium marinum DSM 745 11035461 YP_004772462.1 CDS Cycma_0453 NC_015914.1 511357 512790 D PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; InterPro IPR000120:IPR004412; KEGG: mtt:Ftrac_3332 aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A; PFAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; glutamyl-tRNA(Gln) amidotransferase subunit A 511357..512790 Cyclobacterium marinum DSM 745 11035462 YP_004772463.1 CDS Cycma_0454 NC_015914.1 512794 514185 D PFAM: Transglycosylase SLT domain; LysM domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR002482:IPR008258:IPR018392; KEGG: mtt:Ftrac_3333 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Membrane-bound lytic murein transglycosylase D; lytic transglycosylase 512794..514185 Cyclobacterium marinum DSM 745 11035463 YP_004772464.1 CDS Cycma_0455 NC_015914.1 514269 515369 D KEGG: mtt:Ftrac_3334 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 514269..515369 Cyclobacterium marinum DSM 745 11035464 YP_004772465.1 CDS Cycma_0456 NC_015914.1 515394 517658 D PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: chu:CHU_0027 malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SPTR: NADP-dependent malic enzyme; malic protein NAD-binding protein 515394..517658 Cyclobacterium marinum DSM 745 11035465 YP_004772466.1 CDS Cycma_0457 NC_015914.1 517655 518257 D PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; InterPro IPR003583:IPR013849:IPR011114:IPR000085; KEGG: chu:CHU_0028 Holliday junction DNA helicase; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; Holliday junction DNA helicase subunit RuvA 517655..518257 Cyclobacterium marinum DSM 745 11035466 YP_004772467.1 CDS Cycma_0458 NC_015914.1 518268 525440 D KEGG: mtt:Ftrac_3337 gliding motility-related protein; SPTR: Gliding motility-related protein; gliding motility-like protein 518268..525440 Cyclobacterium marinum DSM 745 11035467 YP_004772468.1 CDS Cycma_0459 NC_015914.1 525493 525870 D PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR002930:IPR017453; KEGG: cat:CA2559_01205 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; glycine cleavage system H protein 525493..525870 Cyclobacterium marinum DSM 745 11035468 YP_004772469.1 CDS Cycma_0460 NC_015914.1 525919 526257 D PFAM: VanZ like family; InterPro IPR006976; KEGG: lby:Lbys_3167 VanZ family protein; PFAM: VanZ like protein; SPTR: VanZ like family protein; VanZ family protein 525919..526257 Cyclobacterium marinum DSM 745 11035469 YP_004772470.1 CDS Cycma_0461 NC_015914.1 526333 527007 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: mtt:Ftrac_3340 outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; SPTR: TonB protein; TIGRFAM: TonB, C-terminal; TonB family protein 526333..527007 Cyclobacterium marinum DSM 745 11035470 YP_004772471.1 CDS Cycma_0462 NC_015914.1 527092 527454 D PFAM: Uncharacterized protein conserved in bacteria (DUF2237); COGs: COG3651 conserved hypothetical protein; InterPro IPR018714; KEGG: mms:mma_0567 hypothetical protein; PFAM: Protein of unknown function DUF2237; SPTR: uncharacterized protein; hypothetical protein 527092..527454 Cyclobacterium marinum DSM 745 11035471 YP_004772472.1 CDS Cycma_0463 NC_015914.1 527503 527934 R PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: vcn:VOLCADRAFT_74606 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: uncharacterized protein; NUDIX hydrolase complement(527503..527934) Cyclobacterium marinum DSM 745 11035472 YP_004772473.1 CDS Cycma_0464 NC_015914.1 528235 530112 R PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR006148; KEGG: sli:Slin_6212 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: N-acetylglucosamine-6-phosphate deacetylase; glucosamine/galactosamine-6-phosphate isomerase complement(528235..530112) Cyclobacterium marinum DSM 745 11035473 YP_004772474.1 CDS Cycma_0465 NC_015914.1 530122 531588 R PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: psn:Pedsa_0686 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: sodium-coupled permease; Na+/solute symporter complement(530122..531588) Cyclobacterium marinum DSM 745 11035474 YP_004772475.1 CDS Cycma_0466 NC_015914.1 532040 533233 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: psn:Pedsa_1789 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(532040..533233) Cyclobacterium marinum DSM 745 11035475 YP_004772476.1 CDS Cycma_0467 NC_015914.1 533593 533703 D hypothetical protein 533593..533703 Cyclobacterium marinum DSM 745 11035476 YP_004772477.1 CDS Cycma_0468 NC_015914.1 533760 533900 D hypothetical protein 533760..533900 Cyclobacterium marinum DSM 745 11035477 YP_004772478.1 CDS Cycma_0469 NC_015914.1 533923 534978 D PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: dfe:Dfer_4494 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; LacI family transcriptional regulator 533923..534978 Cyclobacterium marinum DSM 745 11035478 YP_004772479.1 CDS Cycma_0470 NC_015914.1 535082 535594 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase; InterPro IPR004360:IPR019883; KEGG: cat:CA2559_09323 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; TIGRFAM: Lactoylglutathione lyase; lactoylglutathione lyase complement(535082..535594) Cyclobacterium marinum DSM 745 11035479 YP_004772480.1 CDS Cycma_0471 NC_015914.1 535714 536028 D PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cao:Celal_0732 transcriptional regulator, hxlr family; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, HxlR family; HxlR family transcriptional regulator 535714..536028 Cyclobacterium marinum DSM 745 11035480 YP_004772481.1 CDS Cycma_0472 NC_015914.1 536111 536671 R PFAM: DsrE/DsrF-like family; InterPro IPR014865; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(536111..536671) Cyclobacterium marinum DSM 745 11035481 YP_004772482.1 CDS Cycma_0473 NC_015914.1 537235 538476 R PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ote:Oter_1907 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; polysaccharide deacetylase complement(537235..538476) Cyclobacterium marinum DSM 745 11035482 YP_004772483.1 CDS Cycma_0474 NC_015914.1 538492 539859 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: btk:BT9727_0681 hypothetical protein; SPTR: Alkaline ceramidase domain protein; hypothetical protein complement(538492..539859) Cyclobacterium marinum DSM 745 11035483 YP_004772484.1 CDS Cycma_0475 NC_015914.1 539906 542878 R PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR003088:IPR013428:IPR013427; KEGG: membrane-bound dehydrogenase domain-containing protein; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein complement(539906..542878) Cyclobacterium marinum DSM 745 11035484 YP_004772485.1 CDS Cycma_0476 NC_015914.1 543363 544700 R PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814; KEGG: dfe:Dfer_5257 aminotransferase class-III; PFAM: Aminotransferase class-III; SPTR: Aminotransferase class-III; class III aminotransferase complement(543363..544700) Cyclobacterium marinum DSM 745 11035485 YP_004772486.1 CDS Cycma_0477 NC_015914.1 545145 547625 D KEGG: dfe:Dfer_2647 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 545145..547625 Cyclobacterium marinum DSM 745 11035486 YP_004772487.1 CDS Cycma_0478 NC_015914.1 547844 549220 D PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase; aldehyde dehydrogenase 547844..549220 Cyclobacterium marinum DSM 745 11035487 YP_004772488.1 CDS Cycma_0479 NC_015914.1 549229 550095 R PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: chu:CHU_0138 hypothetical protein; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR: YicC protein; TIGRFAM: Conserved hypothetical protein CHP00255; hypothetical protein complement(549229..550095) Cyclobacterium marinum DSM 745 11035488 YP_004772489.1 CDS Cycma_0480 NC_015914.1 550125 553541 R PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: mtt:Ftrac_1741 WD40-like beta propeller containing protein; PFAM: WD40-like Beta Propeller; SPTR: uncharacterized protein; hypothetical protein complement(550125..553541) Cyclobacterium marinum DSM 745 11035489 YP_004772490.1 CDS Cycma_0481 NC_015914.1 553572 554627 R PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: mtt:Ftrac_1740 fad dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glycine/D-amino acid oxidase (Deaminating); FAD dependent oxidoreductase complement(553572..554627) Cyclobacterium marinum DSM 745 11035490 YP_004772491.1 CDS Cycma_0482 NC_015914.1 554684 555337 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dfe:Dfer_5067 beta-lactamase domain protein; SPTR: Metallo-beta-lactamase; beta-lactamase domain-containing protein 554684..555337 Cyclobacterium marinum DSM 745 11035491 YP_004772492.1 CDS Cycma_0483 NC_015914.1 555334 556038 D PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: shg:Sph21_4020 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol-serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 555334..556038 Cyclobacterium marinum DSM 745 11035492 YP_004772493.1 CDS Cycma_0484 NC_015914.1 556022 559273 D PFAM: Peptidase C25; KEGG: mtt:Ftrac_1737 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 556022..559273 Cyclobacterium marinum DSM 745 11035493 YP_004772494.1 CDS Cycma_0485 NC_015914.1 559270 560484 D KEGG: mtt:Ftrac_1736 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 559270..560484 Cyclobacterium marinum DSM 745 11035494 YP_004772495.1 CDS Cycma_0486 NC_015914.1 560481 561758 D PFAM: Peptidase M16 inactive domain; COGs: COG0612 Zn-dependent peptidase; InterPro IPR007863; KEGG: shg:Sph21_3675 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; SPTR: zinc protease; peptidase M16 domain-containing protein 560481..561758 Cyclobacterium marinum DSM 745 11035495 YP_004772496.1 CDS Cycma_0487 NC_015914.1 561768 562763 R PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_0084 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2 protein; family 2 glycosyl transferase complement(561768..562763) Cyclobacterium marinum DSM 745 11035496 YP_004772497.1 CDS Cycma_0488 NC_015914.1 562828 563424 D PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: ppn:Palpr_0468 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Thymidylate synthase; hypothetical protein 562828..563424 Cyclobacterium marinum DSM 745 11035497 YP_004772498.1 CDS Cycma_0489 NC_015914.1 563417 564019 R PFAM: 3'-5' exonuclease; COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: ppn:Palpr_2743 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: 3'-5' exonuclease domain protein; 3'-5' exonuclease complement(563417..564019) Cyclobacterium marinum DSM 745 11035498 YP_004772499.1 CDS Cycma_0491 NC_015914.1 565861 566340 D PFAM: Protein of unknown function (DUF962); COGs: COG4539 membrane protein; InterPro IPR009305; KEGG: mtt:Ftrac_0080 hypothetical protein; SPTR: Membrane protein; manually curated; hypothetical protein 565861..566340 Cyclobacterium marinum DSM 745 11035500 YP_004772500.1 CDS Cycma_0492 NC_015914.1 566452 568467 D PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR006153:IPR003148:IPR006037; KEGG: mtt:Ftrac_2162 kef-type potassium/proton antiporter, cpa2 family; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Kef-type potassium/proton antiporter, CPA2 family; sodium/hydrogen exchanger 566452..568467 Cyclobacterium marinum DSM 745 11035501 YP_004772501.1 CDS Cycma_0493 NC_015914.1 568643 569692 R PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; InterPro IPR003699; KEGG: mtt:Ftrac_2977 S-adenosylmethionine--tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1; TIGRFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(568643..569692) Cyclobacterium marinum DSM 745 11035502 YP_004772502.1 CDS Cycma_0494 NC_015914.1 569808 571052 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2978 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, ATP-binding protein; hypothetical protein 569808..571052 Cyclobacterium marinum DSM 745 11035503 YP_004772503.1 CDS Cycma_0495 NC_015914.1 571092 572141 R PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR003593:IPR013765; KEGG: mtt:Ftrac_3374 RecA protein; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein RecA; TIGRFAM: DNA recombination and repair protein RecA; recombinase A complement(571092..572141) Cyclobacterium marinum DSM 745 11035504 YP_004772504.1 CDS Cycma_0496 NC_015914.1 572322 573116 D PFAM: Protein of unknown function (DUF3108); KEGG: dfe:Dfer_0003 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 572322..573116 Cyclobacterium marinum DSM 745 11035505 YP_004772505.1 CDS Cycma_0497 NC_015914.1 573273 573959 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: mtt:Ftrac_3371 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator YycF; winged helix family two component transcriptional regulator 573273..573959 Cyclobacterium marinum DSM 745 11035506 YP_004772506.1 CDS Cycma_0498 NC_015914.1 573956 575029 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: mtt:Ftrac_3370 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Sensory box histidine kinase PhoR; integral membrane sensor signal transduction histidine kinase 573956..575029 Cyclobacterium marinum DSM 745 11035507 YP_004772507.1 CDS Cycma_0499 NC_015914.1 575099 575812 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: dfe:Dfer_3759 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; pseudouridine synthase 575099..575812 Cyclobacterium marinum DSM 745 11035508 YP_004772508.1 CDS Cycma_0500 NC_015914.1 576509 577651 R KEGG: bvu:BVU_0765 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(576509..577651) Cyclobacterium marinum DSM 745 11035509 YP_004772509.1 CDS Cycma_0501 NC_015914.1 578500 579672 R KEGG: bfs:BF3552 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(578500..579672) Cyclobacterium marinum DSM 745 11035510 YP_004772510.1 CDS Cycma_0502 NC_015914.1 581119 581499 D KEGG: dfe:Dfer_0096 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 581119..581499 Cyclobacterium marinum DSM 745 11035511 YP_004772511.1 CDS Cycma_0503 NC_015914.1 581697 582824 D PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: mtt:Ftrac_0959 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Methylamine utilization protein MauG; Di-heme cytochrome c peroxidase 581697..582824 Cyclobacterium marinum DSM 745 11035512 YP_004772512.1 CDS Cycma_0504 NC_015914.1 582831 583574 D KEGG: mtt:Ftrac_0958 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 582831..583574 Cyclobacterium marinum DSM 745 11035513 YP_004772513.1 CDS Cycma_0506 NC_015914.1 584667 585743 D KEGG: cao:Celal_3163 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 584667..585743 Cyclobacterium marinum DSM 745 11035515 YP_004772514.1 CDS Cycma_0507 NC_015914.1 585708 585836 R hypothetical protein complement(585708..585836) Cyclobacterium marinum DSM 745 11035516 YP_004772515.1 CDS Cycma_0508 NC_015914.1 585867 586076 R hypothetical protein complement(585867..586076) Cyclobacterium marinum DSM 745 11035517 YP_004772516.1 CDS Cycma_0509 NC_015914.1 586533 586784 R hypothetical protein complement(586533..586784) Cyclobacterium marinum DSM 745 11035518 YP_004772517.1 CDS Cycma_0510 NC_015914.1 586947 588206 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_3571 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: Peptidase, M16 family; peptidase M16 domain-containing protein 586947..588206 Cyclobacterium marinum DSM 745 11035519 YP_004772518.1 CDS Cycma_0511 NC_015914.1 588212 588847 D PFAM: O-methyltransferase; COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: mtt:Ftrac_3570 O-methyltransferase 3; PFAM: O-methyltransferase, family 3; SPTR: O-methyltransferase; O-methyltransferase 3 588212..588847 Cyclobacterium marinum DSM 745 11035520 YP_004772519.1 CDS Cycma_0512 NC_015914.1 588861 590450 D PFAM: Transglycosylase SLT domain; LysM domain; InterPro IPR002482:IPR008258:IPR018392; KEGG: mtt:Ftrac_3569 peptidoglycan-binding lysin domain; PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase-like, catalytic; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Glycoside hydrolase 23; peptidoglycan-binding lysin domain-containing protein 588861..590450 Cyclobacterium marinum DSM 745 11035521 YP_004772520.1 CDS Cycma_0513 NC_015914.1 590495 591487 D PFAM: Protein of unknown function (DUF3078); KEGG: mtt:Ftrac_3567 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 590495..591487 Cyclobacterium marinum DSM 745 11035522 YP_004772521.1 CDS Cycma_0515 NC_015914.1 593541 594401 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: dfe:Dfer_0576 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(593541..594401) Cyclobacterium marinum DSM 745 11035524 YP_004772522.1 CDS Cycma_0516 NC_015914.1 594361 594459 R hypothetical protein complement(594361..594459) Cyclobacterium marinum DSM 745 11035525 YP_004772523.1 CDS Cycma_0517 NC_015914.1 594524 596011 D KEGG: mtt:Ftrac_1886 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 594524..596011 Cyclobacterium marinum DSM 745 11035526 YP_004772524.1 CDS Cycma_0518 NC_015914.1 596008 596706 D PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_1887 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter 596008..596706 Cyclobacterium marinum DSM 745 11035527 YP_004772525.1 CDS Cycma_0519 NC_015914.1 596888 598123 D PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; COGs: COG2041 Sulfite oxidase; InterPro IPR000572:IPR005066:IPR006311; KEGG: cly:Celly_3002 sulfite oxidase; PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation; SPTR: Sulfite oxidase; oxidoreductase molybdopterin binding protein 596888..598123 Cyclobacterium marinum DSM 745 11035528 YP_004772526.1 CDS Cycma_0520 NC_015914.1 598125 598577 D KEGG: cly:Celly_3001 monoheme cytochrome c; SPTR: Monoheme cytochrome c; hypothetical protein 598125..598577 Cyclobacterium marinum DSM 745 11035529 YP_004772527.1 CDS Cycma_0521 NC_015914.1 598579 600018 R PFAM: Protein of unknown function (DUF3748); KEGG: dfe:Dfer_4309 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(598579..600018) Cyclobacterium marinum DSM 745 11035530 YP_004772528.1 CDS Cycma_0522 NC_015914.1 600105 602270 D PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: shg:Sph21_2866 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31; SPTR: Glycoside hydrolase 31; glycoside hydrolase 600105..602270 Cyclobacterium marinum DSM 745 11035531 YP_004772529.1 CDS Cycma_0523 NC_015914.1 602646 603092 D KEGG: sli:Slin_0135 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 602646..603092 Cyclobacterium marinum DSM 745 11035532 YP_004772530.1 CDS Cycma_0524 NC_015914.1 603210 605018 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795:IPR004161:IPR000640:IPR005225:IPR 006298; KEGG: lby:Lbys_2768 gtp-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA/BipA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; GTP-binding protein TypA 603210..605018 Cyclobacterium marinum DSM 745 11035533 YP_004772531.1 CDS Cycma_0525 NC_015914.1 605177 606154 D PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023:IPR012828; KEGG: lby:Lbys_1517 6-phosphofructokinase; PFAM: Phosphofructokinase; SPTR: 6-phosphofructokinase 1; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase 605177..606154 Cyclobacterium marinum DSM 745 11035534 YP_004772532.1 CDS Cycma_0526 NC_015914.1 606157 606525 D SPTR: uncharacterized protein; hypothetical protein 606157..606525 Cyclobacterium marinum DSM 745 11035535 YP_004772533.1 CDS Cycma_0527 NC_015914.1 606513 607424 R PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; InterPro IPR002627:IPR018022; KEGG: mtt:Ftrac_0829 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA dimethylallyltransferase complement(606513..607424) Cyclobacterium marinum DSM 745 11035536 YP_004772534.1 CDS Cycma_0528 NC_015914.1 607471 608229 D PFAM: Response regulator receiver domain; Hpt domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789:IPR008207; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, receiver region; SPTR: Sensor histidine kinase/response regulator fusion protein; response regulator receiver and Hpt phospho transfer protein 607471..608229 Cyclobacterium marinum DSM 745 11035537 YP_004772535.1 CDS Cycma_0529 NC_015914.1 608222 608602 D PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: chu:CHU_2785 sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: CAI-1 autoinducer sensor kinase/phosphatase CqsS (Cholerae quorum-sensing sensor); response regulator receiver protein 608222..608602 Cyclobacterium marinum DSM 745 11035538 YP_004772536.1 CDS Cycma_0530 NC_015914.1 608604 608882 D KEGG: mtt:Ftrac_0832 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 608604..608882 Cyclobacterium marinum DSM 745 11035539 YP_004772537.1 CDS Cycma_0531 NC_015914.1 608879 609640 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: mtt:Ftrac_0833 metal-dependent hydrolase; SPTR: Metal-dependent hydrolase; metal-dependent hydrolase 608879..609640 Cyclobacterium marinum DSM 745 11035540 YP_004772538.1 CDS Cycma_0532 NC_015914.1 609642 611207 D PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: mtt:Ftrac_0834 hypothetical protein; PFAM: Protein of unknown function DUF814; Fibronectin-binding A, N-terminal; SPTR: RNA-binding protein; hypothetical protein 609642..611207 Cyclobacterium marinum DSM 745 11035541 YP_004772539.1 CDS Cycma_0533 NC_015914.1 611444 612874 R PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015794:IPR001697; KEGG: mtt:Ftrac_1175 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; pyruvate kinase complement(611444..612874) Cyclobacterium marinum DSM 745 11035542 YP_004772540.1 CDS Cycma_0534 NC_015914.1 612886 613314 R KEGG: psn:Pedsa_2758 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(612886..613314) Cyclobacterium marinum DSM 745 11035543 YP_004772541.1 CDS Cycma_0535 NC_015914.1 613463 613699 D PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR006163:IPR003231; KEGG: mtt:Ftrac_1173 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); acyl carrier protein 613463..613699 Cyclobacterium marinum DSM 745 11035544 YP_004772542.1 CDS Cycma_0536 NC_015914.1 613719 614972 D PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031:IPR017568; KEGG: mtt:Ftrac_1172 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; 3-oxoacyl-ACP synthase 613719..614972 Cyclobacterium marinum DSM 745 11035545 YP_004772543.1 CDS Cycma_0537 NC_015914.1 614975 615718 D PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR000999:IPR001159:IPR011907; KEGG: mtt:Ftrac_1171 RNAse III; PFAM: Ribonuclease III; Double-stranded RNA binding; SMART: Ribonuclease III; Double-stranded RNA binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial; ribonuclease 3 614975..615718 Cyclobacterium marinum DSM 745 11035546 YP_004772544.1 CDS Cycma_0538 NC_015914.1 615759 617615 D PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; COGs: COG0171 NAD synthase; InterPro IPR003010:IPR003694; KEGG: mtt:Ftrac_1170 nad+ synthetase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: glutamine-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthase; NAD+ synthetase 615759..617615 Cyclobacterium marinum DSM 745 11035547 YP_004772545.1 CDS Cycma_0539 NC_015914.1 617646 618749 D PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: mtt:Ftrac_1169 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 617646..618749 Cyclobacterium marinum DSM 745 11035548 YP_004772546.1 CDS Cycma_0540 NC_015914.1 618758 618967 R PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: dds:Ddes_1968 protein of unknown function DUF37; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein ALPR1_15124; TIGRFAM: Protein of unknown function DUF37; manually curated; hypothetical protein complement(618758..618967) Cyclobacterium marinum DSM 745 11035549 YP_004772547.1 CDS Cycma_0541 NC_015914.1 619054 620511 D PFAM: Surface antigen variable number repeat; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: mtt:Ftrac_1167 surface antigen variable number repeat-containing protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: outer membrane protein; surface antigen (D15) 619054..620511 Cyclobacterium marinum DSM 745 11035550 YP_004772548.1 CDS Cycma_0542 NC_015914.1 620587 621414 D KEGG: mtt:Ftrac_1165 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 620587..621414 Cyclobacterium marinum DSM 745 11035551 YP_004772549.1 CDS Cycma_0543 NC_015914.1 621411 623513 D KEGG: mtt:Ftrac_1164 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 621411..623513 Cyclobacterium marinum DSM 745 11035552 YP_004772550.1 CDS Cycma_0544 NC_015914.1 623555 623974 R PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; COGs: COG1970 Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: tgr:Tgr7_2042 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; Large-conductance mechanosensitive channel complement(623555..623974) Cyclobacterium marinum DSM 745 11035553 YP_004772551.1 CDS Cycma_0545 NC_015914.1 624089 626176 D PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase; COGs: COG1770 Protease II; InterPro IPR004106:IPR001375; KEGG: zpr:ZPR_2342 S9 family peptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Oligopeptidase B; peptidase S9A prolyl oligopeptidase domain-containing protein beta-propeller 624089..626176 Cyclobacterium marinum DSM 745 11035554 YP_004772552.1 CDS Cycma_0546 NC_015914.1 626379 626912 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: cpf:CPF_1021 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: DNA-binding protein; helix-turn-helix domain-containing protein complement(626379..626912) Cyclobacterium marinum DSM 745 11035555 YP_004772553.1 CDS Cycma_0547 NC_015914.1 627012 627248 D hypothetical protein 627012..627248 Cyclobacterium marinum DSM 745 11035556 YP_004772554.1 CDS Cycma_0548 NC_015914.1 627252 629459 D KEGG: wvi:Weevi_0140 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 627252..629459 Cyclobacterium marinum DSM 745 11035557 YP_004772555.1 CDS Cycma_0549 NC_015914.1 629613 630563 D KEGG: dal:Dalk_3577 B transposition protein domain protein; SPTR: uncharacterized protein; hypothetical protein 629613..630563 Cyclobacterium marinum DSM 745 11035558 YP_004772556.1 CDS Cycma_0550 NC_015914.1 630674 631009 D hypothetical protein 630674..631009 Cyclobacterium marinum DSM 745 11035559 YP_004772557.1 CDS Cycma_0551 NC_015914.1 630975 631403 D manually curated; hypothetical protein 630975..631403 Cyclobacterium marinum DSM 745 11035560 YP_004772558.1 CDS Cycma_0552 NC_015914.1 631409 631885 D hypothetical protein 631409..631885 Cyclobacterium marinum DSM 745 11035561 YP_004772559.1 CDS Cycma_0553 NC_015914.1 631888 632529 D KEGG: osp:Odosp_0820 hypothetical protein; SPTR: ATP-dependent serine protease; hypothetical protein 631888..632529 Cyclobacterium marinum DSM 745 11035562 YP_004772560.1 CDS Cycma_0554 NC_015914.1 632526 632930 D hypothetical protein 632526..632930 Cyclobacterium marinum DSM 745 11035563 YP_004772561.1 CDS Cycma_0555 NC_015914.1 632927 633571 D PFAM: Protein of unknown function (DUF3164); KEGG: osp:Odosp_0814 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 632927..633571 Cyclobacterium marinum DSM 745 11035564 YP_004772562.1 CDS Cycma_0556 NC_015914.1 633568 633990 D hypothetical protein 633568..633990 Cyclobacterium marinum DSM 745 11035565 YP_004772563.1 CDS Cycma_0557 NC_015914.1 634002 634361 D hypothetical protein 634002..634361 Cyclobacterium marinum DSM 745 11035566 YP_004772564.1 CDS Cycma_0558 NC_015914.1 634327 634602 D hypothetical protein 634327..634602 Cyclobacterium marinum DSM 745 11035567 YP_004772565.1 CDS Cycma_0559 NC_015914.1 634609 634836 D hypothetical protein 634609..634836 Cyclobacterium marinum DSM 745 11035568 YP_004772566.1 CDS Cycma_0560 NC_015914.1 634833 635270 D KEGG: bpi:BPLAN_340 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 634833..635270 Cyclobacterium marinum DSM 745 11035569 YP_004772567.1 CDS Cycma_0561 NC_015914.1 635300 635506 D hypothetical protein 635300..635506 Cyclobacterium marinum DSM 745 11035570 YP_004772568.1 CDS Cycma_0562 NC_015914.1 635481 635759 D hypothetical protein 635481..635759 Cyclobacterium marinum DSM 745 11035571 YP_004772569.1 CDS Cycma_0563 NC_015914.1 635756 636052 D hypothetical protein 635756..636052 Cyclobacterium marinum DSM 745 11035572 YP_004772570.1 CDS Cycma_0564 NC_015914.1 636049 636210 D hypothetical protein 636049..636210 Cyclobacterium marinum DSM 745 11035573 YP_004772571.1 CDS Cycma_0565 NC_015914.1 636216 636434 D KEGG: bcu:BCAH820_4400 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 636216..636434 Cyclobacterium marinum DSM 745 11035574 YP_004772572.1 CDS Cycma_0566 NC_015914.1 636439 636852 D KEGG: mpo:Mpop_2745 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 636439..636852 Cyclobacterium marinum DSM 745 11035575 YP_004772573.1 CDS Cycma_0567 NC_015914.1 636858 637025 D hypothetical protein 636858..637025 Cyclobacterium marinum DSM 745 11035576 YP_004772574.1 CDS Cycma_0568 NC_015914.1 637050 637307 D hypothetical protein 637050..637307 Cyclobacterium marinum DSM 745 11035577 YP_004772575.1 CDS Cycma_0569 NC_015914.1 637342 637830 D hypothetical protein 637342..637830 Cyclobacterium marinum DSM 745 11035578 YP_004772576.1 CDS Cycma_0570 NC_015914.1 638083 638550 R hypothetical protein complement(638083..638550) Cyclobacterium marinum DSM 745 11035579 YP_004772577.1 CDS Cycma_0571 NC_015914.1 638547 639077 R PFAM: Phage virion morphogenesis family; KEGG: psn:Pedsa_0954 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(638547..639077) Cyclobacterium marinum DSM 745 11035580 YP_004772578.1 CDS Cycma_0572 NC_015914.1 639077 639877 R PFAM: Phage Mu protein F like protein; KEGG: wvi:Weevi_0123 phage head morphogenesis protein, SPP1 gp7 family; SPTR: Predicted protein; phage head morphogenesis protein complement(639077..639877) Cyclobacterium marinum DSM 745 11035581 YP_004772579.1 CDS Cycma_0573 NC_015914.1 639877 641124 R PFAM: Protein of unknown function (DUF935); COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: osp:Odosp_0808 phage head morphogenesis protein, SPP1 gp7 family; PFAM: Protein of unknown function DUF935; SPTR: Predicted protein; hypothetical protein complement(639877..641124) Cyclobacterium marinum DSM 745 11035582 YP_004772580.1 CDS Cycma_0574 NC_015914.1 641209 644385 R PFAM: Carbohydrate binding domain; InterPro IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR: Glycosyl hydrolase 98 carbohydrate binding module; carbohydrate-binding CenC domain-containing protein complement(641209..644385) Cyclobacterium marinum DSM 745 11035583 YP_004772581.1 CDS Cycma_0575 NC_015914.1 644422 646035 R KEGG: psn:Pedsa_0950 phage uncharacterized protein; SPTR: Phage uncharacterized protein; phage protein complement(644422..646035) Cyclobacterium marinum DSM 745 11035584 YP_004772582.1 CDS Cycma_0576 NC_015914.1 646035 646472 R PFAM: ATPase subunit of terminase (gpP-like); KEGG: psn:Pedsa_0949 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(646035..646472) Cyclobacterium marinum DSM 745 11035585 YP_004772583.1 CDS Cycma_0577 NC_015914.1 646644 647708 D KEGG: osp:Odosp_0804 hypothetical protein; SPTR: phage prohead protease, HK97 family; hypothetical protein 646644..647708 Cyclobacterium marinum DSM 745 11035586 YP_004772584.1 CDS Cycma_0578 NC_015914.1 647770 648879 D KEGG: osp:Odosp_0803 hypothetical protein; SPTR: Predicted protein; hypothetical protein 647770..648879 Cyclobacterium marinum DSM 745 11035587 YP_004772585.1 CDS Cycma_0579 NC_015914.1 648954 649187 D hypothetical protein 648954..649187 Cyclobacterium marinum DSM 745 11035588 YP_004772586.1 CDS Cycma_0580 NC_015914.1 649189 649779 D PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847); COGs: COG3926 secretion activating protein; InterPro IPR008565:IPR018537; KEGG: ttu:TERTU_3990 N-acetylmuramidase; PFAM: Peptidoglycan binding domain; Protein of unknown function DUF847; SPTR: uncharacterized protein; peptidoglycan binding domain-containing protein 649189..649779 Cyclobacterium marinum DSM 745 11035589 YP_004772587.1 CDS Cycma_0581 NC_015914.1 649790 650059 D hypothetical protein 649790..650059 Cyclobacterium marinum DSM 745 11035590 YP_004772588.1 CDS Cycma_0582 NC_015914.1 650062 650640 D hypothetical protein 650062..650640 Cyclobacterium marinum DSM 745 11035591 YP_004772589.1 CDS Cycma_0583 NC_015914.1 650782 653166 D KEGG: wvi:Weevi_0252 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 650782..653166 Cyclobacterium marinum DSM 745 11035592 YP_004772590.1 CDS Cycma_0584 NC_015914.1 653159 655189 D hypothetical protein 653159..655189 Cyclobacterium marinum DSM 745 11035593 YP_004772591.1 CDS Cycma_0585 NC_015914.1 655182 656861 D hypothetical protein 655182..656861 Cyclobacterium marinum DSM 745 11035594 YP_004772592.1 CDS Cycma_0586 NC_015914.1 656861 658258 D hypothetical protein 656861..658258 Cyclobacterium marinum DSM 745 11035595 YP_004772593.1 CDS Cycma_0587 NC_015914.1 658255 659082 D hypothetical protein 658255..659082 Cyclobacterium marinum DSM 745 11035596 YP_004772594.1 CDS Cycma_0588 NC_015914.1 659093 659551 D hypothetical protein 659093..659551 Cyclobacterium marinum DSM 745 11035597 YP_004772595.1 CDS Cycma_0589 NC_015914.1 659583 660131 D hypothetical protein 659583..660131 Cyclobacterium marinum DSM 745 11035598 YP_004772596.1 CDS Cycma_0590 NC_015914.1 660497 661681 R KEGG: pdi:BDI_3448 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(660497..661681) Cyclobacterium marinum DSM 745 11035599 YP_004772597.1 CDS Cycma_0591 NC_015914.1 662137 663564 D PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404); COGs: COG2308 conserved hypothetical protein; InterPro IPR007297:IPR007302; KEGG: cao:Celal_3919 hypothetical protein; PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; SPTR: UDP-N-acetylmuramate dehydrogenase; hypothetical protein 662137..663564 Cyclobacterium marinum DSM 745 11035600 YP_004772598.1 CDS Cycma_0592 NC_015914.1 663586 664566 D PFAM: Bacterial domain of unknown function (DUF403); COGs: COG2307 conserved hypothetical protein; InterPro IPR007296; KEGG: cts:Ctha_2388 hypothetical protein; PFAM: Protein of unknown function DUF403, bacteria; SPTR: uncharacterized protein; hypothetical protein 663586..664566 Cyclobacterium marinum DSM 745 11035601 YP_004772599.1 CDS Cycma_0593 NC_015914.1 664563 665303 D PFAM: Proteasome subunit; COGs: COG3484 proteasome-type protease; InterPro IPR001353; KEGG: cts:Ctha_2387 proteasome-type protease; PFAM: Proteasome, subunit alpha/beta; SPTR: Proteasome-type protease; 20S proteasome subunits A/B 664563..665303 Cyclobacterium marinum DSM 745 11035602 YP_004772600.1 CDS Cycma_0594 NC_015914.1 665350 666207 D PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931:IPR013589; KEGG: cyj:Cyan7822_1273 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like; SPTR: Transglutaminase domain protein; transglutaminase domain-containing protein 665350..666207 Cyclobacterium marinum DSM 745 11035603 YP_004772601.1 CDS Cycma_0595 NC_015914.1 666305 667546 D PFAM: Calcineurin-like phosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: gfo:GFO_0142 metallophosphoesterase domain-containing protein; PFAM: Metallophosphoesterase; SPTR: uncharacterized protein; metallophosphoesterase 666305..667546 Cyclobacterium marinum DSM 745 11035604 YP_004772602.1 CDS Cycma_0596 NC_015914.1 667580 670633 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_3517 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: cation efflux system; acriflavin resistance protein complement(667580..670633) Cyclobacterium marinum DSM 745 11035605 YP_004772603.1 CDS Cycma_0597 NC_015914.1 670637 671698 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_3518 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: cation efflux system protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(670637..671698) Cyclobacterium marinum DSM 745 11035606 YP_004772604.1 CDS Cycma_0598 NC_015914.1 672226 673776 R PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: ppd:Ppro_2208 sulphate transporter; PFAM: Sulphate transporter; SPTR: Sulphate transporter; sulfate transporter complement(672226..673776) Cyclobacterium marinum DSM 745 11035607 YP_004772605.1 CDS Cycma_0599 NC_015914.1 673952 674836 R COGs: COG2367 Beta-lactamase class A; KEGG: sli:Slin_5194 beta-lactamase; SPTR: beta-lactamase; beta-lactamase complement(673952..674836) Cyclobacterium marinum DSM 745 11035608 YP_004772606.1 CDS Cycma_0600 NC_015914.1 674850 676268 R PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR001898; KEGG: pmu:PM1585 hypothetical protein; PFAM: Divalent ion symporter; SPTR: uncharacterized protein; TIGRFAM: Sodium/sulphate symporter; anion transporter complement(674850..676268) Cyclobacterium marinum DSM 745 11035609 YP_004772607.1 CDS Cycma_0601 NC_015914.1 678032 678289 D hypothetical protein 678032..678289 Cyclobacterium marinum DSM 745 11035610 YP_004772608.1 CDS Cycma_0602 NC_015914.1 678582 679673 D PFAM: Fic/DOC family; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: ssm:Spirs_0418 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Filamentation induced by cAMP protein Fic; Fic family protein 678582..679673 Cyclobacterium marinum DSM 745 11035611 YP_004772609.1 CDS Cycma_0603 NC_015914.1 679783 680100 D hypothetical protein 679783..680100 Cyclobacterium marinum DSM 745 11035612 YP_004772610.1 CDS Cycma_0604 NC_015914.1 680115 682985 D PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG4951 conserved hypothetical protein; InterPro IPR014001:IPR002755:IPR006935; KEGG: smb:smi_0394 DNA or RNA helicases of superfamily II; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA primase, small subunit; SMART: DEAD-like helicase, N-terminal; SPTR: Type III restriction enzyme, res subunit:DEAD/DEAH box helicase; type III restriction protein res subunit 680115..682985 Cyclobacterium marinum DSM 745 11035613 YP_004772611.1 CDS Cycma_0605 NC_015914.1 683265 683372 R hypothetical protein complement(683265..683372) Cyclobacterium marinum DSM 745 11035614 YP_004772612.1 CDS Cycma_0606 NC_015914.1 683445 683795 D hypothetical protein 683445..683795 Cyclobacterium marinum DSM 745 11035615 YP_004772613.1 CDS Cycma_0607 NC_015914.1 684229 685581 R PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329 transposase; SPTR: transposase; transposase complement(684229..685581) Cyclobacterium marinum DSM 745 11035616 YP_004772614.1 CDS Cycma_0608 NC_015914.1 686098 688242 R InterPro IPR006626; KEGG: fbc:FB2170_01552 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(686098..688242) Cyclobacterium marinum DSM 745 11035617 YP_004772615.1 CDS Cycma_0609 NC_015914.1 690356 690814 R PFAM: AIG2-like family; InterPro IPR009288; KEGG: dre:406278 gamma-glutamyl cyclotransferase; PFAM: AIG2-like; SPTR: Uncharacterized protein; AIG2 family protein complement(690356..690814) Cyclobacterium marinum DSM 745 11035618 YP_004772616.1 CDS Cycma_0610 NC_015914.1 690811 691626 R hypothetical protein complement(690811..691626) Cyclobacterium marinum DSM 745 11035619 YP_004772617.1 CDS Cycma_0611 NC_015914.1 691825 691962 D hypothetical protein 691825..691962 Cyclobacterium marinum DSM 745 11035620 YP_004772618.1 CDS Cycma_0612 NC_015914.1 692036 693031 R PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: sli:Slin_1052 YdjC family protein; PFAM: YdjC-like protein; SPTR: YdjC-like protein; hypothetical protein complement(692036..693031) Cyclobacterium marinum DSM 745 11035621 YP_004772619.1 CDS Cycma_0613 NC_015914.1 693320 694159 R KEGG: ses:SARI_03986 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(693320..694159) Cyclobacterium marinum DSM 745 11035622 YP_004772620.1 CDS Cycma_0614 NC_015914.1 694174 694311 R hypothetical protein complement(694174..694311) Cyclobacterium marinum DSM 745 11035623 YP_004772621.1 CDS Cycma_0615 NC_015914.1 694732 695208 D KEGG: npu:Npun_R1178 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 694732..695208 Cyclobacterium marinum DSM 745 11035624 YP_004772622.1 CDS Cycma_0616 NC_015914.1 695159 695287 R hypothetical protein complement(695159..695287) Cyclobacterium marinum DSM 745 11035625 YP_004772623.1 CDS Cycma_0617 NC_015914.1 695388 695549 D hypothetical protein 695388..695549 Cyclobacterium marinum DSM 745 11035626 YP_004772624.1 CDS Cycma_0618 NC_015914.1 695580 697565 R PFAM: RimK-like ATP-grasp domain; Acetyltransferase (GNAT) family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR000182:IPR013651; KEGG: dsa:Desal_2904 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ATP-grasp fold, RimK-type; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(695580..697565) Cyclobacterium marinum DSM 745 11035627 YP_004772625.1 CDS Cycma_0619 NC_015914.1 698622 700964 R KEGG: sna:Snas_5935 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(698622..700964) Cyclobacterium marinum DSM 745 11035628 YP_004772626.1 CDS Cycma_0620 NC_015914.1 701311 701679 R hypothetical protein complement(701311..701679) Cyclobacterium marinum DSM 745 11035629 YP_004772627.1 CDS Cycma_0621 NC_015914.1 701766 702413 R hypothetical protein complement(701766..702413) Cyclobacterium marinum DSM 745 11035630 YP_004772628.1 CDS Cycma_0622 NC_015914.1 702426 702944 R hypothetical protein complement(702426..702944) Cyclobacterium marinum DSM 745 11035631 YP_004772629.1 CDS Cycma_0623 NC_015914.1 704297 705388 R PFAM: Cobalamin-independent synthase, Catalytic domain; COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR002629; KEGG: dat:HRM2_34760 MetE; PFAM: Methionine synthase, vitamin-B12 independent; SPTR: MetE; vitamin-B12 independent methionine synthase complement(704297..705388) Cyclobacterium marinum DSM 745 11035632 YP_004772630.1 CDS Cycma_0624 NC_015914.1 706049 707419 R KEGG: fjo:Fjoh_4072 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein complement(706049..707419) Cyclobacterium marinum DSM 745 11035633 YP_004772631.1 CDS Cycma_0625 NC_015914.1 707423 709873 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_4071 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor complement(707423..709873) Cyclobacterium marinum DSM 745 11035634 YP_004772632.1 CDS Cycma_0626 NC_015914.1 710325 712355 R KEGG: cts:Ctha_0375 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(710325..712355) Cyclobacterium marinum DSM 745 11035635 YP_004772633.1 CDS Cycma_0627 NC_015914.1 712689 713456 R KEGG: rbi:RB2501_03395 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(712689..713456) Cyclobacterium marinum DSM 745 11035636 YP_004772634.1 CDS Cycma_0628 NC_015914.1 713815 714558 R PFAM: SpoU rRNA Methylase; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: sli:Slin_0993 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: RNA methyltransferase, TrmH family; tRNA/rRNA methyltransferase SpoU complement(713815..714558) Cyclobacterium marinum DSM 745 11035637 YP_004772635.1 CDS Cycma_0629 NC_015914.1 714564 716993 D PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: mtt:Ftrac_1558 surface antigen (d15); PFAM: Bacterial surface antigen (D15); SPTR: Outer membrane protein; surface antigen (D15) 714564..716993 Cyclobacterium marinum DSM 745 11035638 YP_004772636.1 CDS Cycma_0630 NC_015914.1 717017 717922 D PFAM: Coproporphyrinogen III oxidase; COGs: COG0408 Coproporphyrinogen III oxidase; InterPro IPR001260; KEGG: sli:Slin_2294 coproporphyrinogen oxidase; PFAM: Coproporphyrinogen III oxidase; SPTR: Coproporphyrinogen III oxidase, aerobic; coproporphyrinogen III oxidase 717017..717922 Cyclobacterium marinum DSM 745 11035639 YP_004772637.1 CDS Cycma_0631 NC_015914.1 717926 718519 D PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: mtt:Ftrac_1489 phosphoesterase pa-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Membrane-associated phospholipid phosphatase; PA-phosphatase-like phosphoesterase 717926..718519 Cyclobacterium marinum DSM 745 11035640 YP_004772638.1 CDS Cycma_0632 NC_015914.1 718506 719123 R PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: dfe:Dfer_2926 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(718506..719123) Cyclobacterium marinum DSM 745 11035641 YP_004772639.1 CDS Cycma_0633 NC_015914.1 719371 720027 D PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; InterPro IPR000682; KEGG: mtt:Ftrac_1423 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 719371..720027 Cyclobacterium marinum DSM 745 11035642 YP_004772640.1 CDS Cycma_0634 NC_015914.1 720039 720578 D PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: mtt:Ftrac_3096 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase domain protein; thioesterase 720039..720578 Cyclobacterium marinum DSM 745 11035643 YP_004772641.1 CDS Cycma_0635 NC_015914.1 720611 721168 D KEGG: phe:Phep_0491 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 720611..721168 Cyclobacterium marinum DSM 745 11035644 YP_004772642.1 CDS Cycma_0636 NC_015914.1 721173 721496 D TIGRFAM: integral membrane protein; KEGG: bcl:ABC3955 hypothetical protein; SPTR: Hypothetical Membrane Spanning Protein; hypothetical protein 721173..721496 Cyclobacterium marinum DSM 745 11035645 YP_004772643.1 CDS Cycma_0637 NC_015914.1 721518 722540 D KEGG: mtt:Ftrac_1843 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 721518..722540 Cyclobacterium marinum DSM 745 11036942 YP_004772644.1 CDS Cycma_0638 NC_015914.1 722616 723272 D PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: mtt:Ftrac_2175 ferritin dps family protein; PFAM: Ferritin/Dps protein; SPTR: Ferritin Dps family protein; ferritin 722616..723272 Cyclobacterium marinum DSM 745 11036943 YP_004772645.1 CDS Cycma_0639 NC_015914.1 723339 725789 R InterPro IPR001611; KEGG: mtt:Ftrac_0519 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(723339..725789) Cyclobacterium marinum DSM 745 11036944 YP_004772646.1 CDS Cycma_0640 NC_015914.1 725776 726615 R KEGG: mtt:Ftrac_0520 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(725776..726615) Cyclobacterium marinum DSM 745 11036945 YP_004772647.1 CDS Cycma_0641 NC_015914.1 726612 727190 R KEGG: mtt:Ftrac_0521 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(726612..727190) Cyclobacterium marinum DSM 745 11036946 YP_004772648.1 CDS Cycma_0642 NC_015914.1 727219 727686 R KEGG: mtt:Ftrac_0522 hypothetical protein; SPTR: Histone-lysine N-methyltransferase pr-Set7; hypothetical protein complement(727219..727686) Cyclobacterium marinum DSM 745 11036947 YP_004772649.1 CDS Cycma_0643 NC_015914.1 728046 729131 R PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: mtt:Ftrac_2913 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Cytochrome c biogenesis protein; alkyl hydroperoxide reductase complement(728046..729131) Cyclobacterium marinum DSM 745 11036948 YP_004772650.1 CDS Cycma_0644 NC_015914.1 729166 730650 R PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; InterPro IPR004413:IPR006075:IPR006107:IPR018027; KEGG: chu:CHU_1447 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(729166..730650) Cyclobacterium marinum DSM 745 11036949 YP_004772651.1 CDS Cycma_0645 NC_015914.1 730718 733354 R PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR002318:IPR018164:IPR012947:IPR003156; KEGG: mtt:Ftrac_2911 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SPTR: Alanine--tRNA ligase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; alanyl-tRNA synthetase complement(730718..733354) Cyclobacterium marinum DSM 745 11036950 YP_004772652.1 CDS Cycma_0646 NC_015914.1 733510 734487 D PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_2910 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; peptidase M23 733510..734487 Cyclobacterium marinum DSM 745 11036951 YP_004772653.1 CDS Cycma_0647 NC_015914.1 734651 735004 D InterPro IPR000551; KEGG: mtt:Ftrac_2908 transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator; regulatory protein MerR 734651..735004 Cyclobacterium marinum DSM 745 11036952 YP_004772654.1 CDS Cycma_0648 NC_015914.1 734985 736115 D PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: sli:Slin_2383 DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; SPTR: DNA processing protein DprA; TIGRFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 734985..736115 Cyclobacterium marinum DSM 745 11036953 YP_004772655.1 CDS Cycma_0649 NC_015914.1 736185 736844 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 736185..736844 Cyclobacterium marinum DSM 745 11036954 YP_004772656.1 CDS Cycma_0650 NC_015914.1 736895 738295 R PFAM: Peptidase M23; Bacterial SH3 domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: sli:Slin_6234 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; peptidase M23 complement(736895..738295) Cyclobacterium marinum DSM 745 11036955 YP_004772657.1 CDS Cycma_0651 NC_015914.1 738273 738836 R PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693 intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: psn:Pedsa_3443 intracellular protease, PfpI family; PFAM: ThiJ/PfpI; SPTR: Intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; PfpI family intracellular protease complement(738273..738836) Cyclobacterium marinum DSM 745 11036956 YP_004772658.1 CDS Cycma_0652 NC_015914.1 739282 740406 R PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: mtt:Ftrac_1425 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta complement(739282..740406) Cyclobacterium marinum DSM 745 11036957 YP_004772659.1 CDS Cycma_0653 NC_015914.1 740641 742320 R PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated ABC transporter substrate-binding component GldG; InterPro IPR019863:IPR019196; KEGG: aas:Aasi_0220 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding-associated ABC transporter substrate-binding component GldG; TIGRFAM: Gliding-associated ABC transporter substrate-binding GldG; gliding-associated ABC transporter substrate-binding protein GldG complement(740641..742320) Cyclobacterium marinum DSM 745 11036958 YP_004772660.1 CDS Cycma_0654 NC_015914.1 742313 743035 R TIGRFAM: gliding motility-associated ABC transporter permease GldF; InterPro IPR019860; KEGG: dfe:Dfer_4470 ABC transporter permease; gliding motility-associated protein; SPTR: Gliding motility-associated ABC transporter permease GldF; TIGRFAM: Gliding motility-associated ABC transporter permease GldF; gliding motility-associated ABC transporter permease GldF complement(742313..743035) Cyclobacterium marinum DSM 745 11036959 YP_004772661.1 CDS Cycma_0655 NC_015914.1 743040 743948 R PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR019864:IPR003593:IPR003439; KEGG: mtt:Ftrac_1432 protein involved in gliding motility glda; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Gliding motility-associated ABC transporter ATP-binding subunit GldA; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA; gliding motility-associated ABC transporter ATP-binding subunit GldA complement(743040..743948) Cyclobacterium marinum DSM 745 11036960 YP_004772662.1 CDS Cycma_0656 NC_015914.1 744269 745468 R PFAM: Phosphoglycerate kinase; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: dfe:Dfer_2700 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; phosphoglycerate kinase complement(744269..745468) Cyclobacterium marinum DSM 745 11036961 YP_004772663.1 CDS Cycma_0657 NC_015914.1 745507 746469 R PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 translation factor (SUA5); InterPro IPR004388:IPR006070:IPR005145; KEGG: Sua5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5; SPTR: Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein complement(745507..746469) Cyclobacterium marinum DSM 745 11036962 YP_004772664.1 CDS Cycma_0658 NC_015914.1 746469 747182 R PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_3527 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: tetratricopeptide TPR_2; hypothetical protein complement(746469..747182) Cyclobacterium marinum DSM 745 11036963 YP_004772665.1 CDS Cycma_0659 NC_015914.1 747265 747816 R PFAM: NUDIX domain; InterPro IPR000086; KEGG: xac:XAC1843 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase, NUDIX family; NUDIX hydrolase complement(747265..747816) Cyclobacterium marinum DSM 745 11036964 YP_004772666.1 CDS Cycma_0660 NC_015914.1 747820 748407 R KEGG: mtt:Ftrac_2258 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(747820..748407) Cyclobacterium marinum DSM 745 11036965 YP_004772667.1 CDS Cycma_0661 NC_015914.1 748404 750326 R PFAM: Helicase conserved C-terminal domain; Iron dependent repressor, N-terminal DNA binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR018329:IPR014001:IPR001650:IPR011545; KEGG: mtt:Ftrac_1364 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal; ATP-dependent DNA helicase RecQ complement(748404..750326) Cyclobacterium marinum DSM 745 11036966 YP_004772668.1 CDS Cycma_0662 NC_015914.1 750406 752367 R PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: mtt:Ftrac_1367 ComEC/rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2 family protein; TIGRFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein complement(750406..752367) Cyclobacterium marinum DSM 745 11036967 YP_004772669.1 CDS Cycma_0663 NC_015914.1 752748 753308 R KEGG: gfo:GFO_3403 secreted protein; SPTR: Secreted protein; secreted protein complement(752748..753308) Cyclobacterium marinum DSM 745 11036968 YP_004772670.1 CDS Cycma_0664 NC_015914.1 753346 753789 R PFAM: Acetyltransferase (GNAT) family; COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: mtt:Ftrac_1368 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(753346..753789) Cyclobacterium marinum DSM 745 11036969 YP_004772671.1 CDS Cycma_0665 NC_015914.1 753786 754748 R PFAM: PhoH-like protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: mtt:Ftrac_1369 PhoH family protein; PFAM: PhoH-like protein; SPTR: PhoH family protein; PhoH family protein complement(753786..754748) Cyclobacterium marinum DSM 745 11036970 YP_004772672.1 CDS Cycma_0666 NC_015914.1 754849 755619 D PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: chu:CHU_2970 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: uncharacterized protein; hypothetical protein 754849..755619 Cyclobacterium marinum DSM 745 11036971 YP_004772673.1 CDS Cycma_0667 NC_015914.1 755941 756042 R KEGG: mtt:Ftrac_1391 N-6 DNA methylase; SPTR: N-6 DNA methylase; N-6 DNA methylase complement(755941..756042) Cyclobacterium marinum DSM 745 11036973 YP_004772674.1 CDS Cycma_0668 NC_015914.1 756668 757333 D hypothetical protein 756668..757333 Cyclobacterium marinum DSM 745 11036974 YP_004772675.1 CDS Cycma_0669 NC_015914.1 757335 758261 R PFAM: Abi-like protein; COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: fps:FP0069 hypothetical protein; PFAM: Abortive infection bacteriophage resistance related; SPTR: uncharacterized protein; Abi family protein complement(757335..758261) Cyclobacterium marinum DSM 745 11036975 YP_004772676.1 CDS Cycma_0670 NC_015914.1 758617 759036 D hypothetical protein 758617..759036 Cyclobacterium marinum DSM 745 11036976 YP_004772677.1 CDS Cycma_0671 NC_015914.1 759095 759823 R KEGG: lby:Lbys_3582 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(759095..759823) Cyclobacterium marinum DSM 745 11036977 YP_004772678.1 CDS Cycma_0672 NC_015914.1 759958 760917 R hypothetical protein complement(759958..760917) Cyclobacterium marinum DSM 745 11036978 YP_004772679.1 CDS Cycma_0673 NC_015914.1 760921 762300 R PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: rma:Rmag_0129 membrane bound O-acyl transferase, MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase MBOAT family protein complement(760921..762300) Cyclobacterium marinum DSM 745 11036979 YP_004772680.1 CDS Cycma_0674 NC_015914.1 762617 763714 D PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: mtt:Ftrac_1494 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: uncharacterized protein; hypothetical protein 762617..763714 Cyclobacterium marinum DSM 745 11036980 YP_004772681.1 CDS Cycma_0675 NC_015914.1 763813 766461 R PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM: heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013427:IPR004155; KEGG: dfe:Dfer_0143 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Heme-binding protein; TIGRFAM: haem-binding region; heme-binding protein complement(763813..766461) Cyclobacterium marinum DSM 745 11036981 YP_004772682.1 CDS Cycma_0676 NC_015914.1 766584 767276 R PFAM: Phosphoadenosine phosphosulfate reductase; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: hch:HCH_04016 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase-like protein; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzyme; phosphoadenosine phosphosulfate reductase complement(766584..767276) Cyclobacterium marinum DSM 745 11036982 YP_004772683.1 CDS Cycma_0677 NC_015914.1 767395 768555 R PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: dfe:Dfer_1165 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: transport protein; major facilitator superfamily protein complement(767395..768555) Cyclobacterium marinum DSM 745 11036983 YP_004772684.1 CDS Cycma_0678 NC_015914.1 768917 769591 D KEGG: mtt:Ftrac_1592 spheroidene monooxygenase; SPTR: Spheroidene monooxygenase; manually curated; spheroidene monooxygenase 768917..769591 Cyclobacterium marinum DSM 745 11036984 YP_004772685.1 CDS Cycma_0679 NC_015914.1 769597 770535 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058; KEGG: ccv:CCV52592_0507 glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs); PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: glutamyl-Q tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein 769597..770535 Cyclobacterium marinum DSM 745 11036985 YP_004772686.1 CDS Cycma_0680 NC_015914.1 770472 771683 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: dfe:Dfer_5258 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: oxidoreductase; oxidoreductase domain-containing protein complement(770472..771683) Cyclobacterium marinum DSM 745 11036986 YP_004772687.1 CDS Cycma_0681 NC_015914.1 772107 772994 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: lby:Lbys_1767 xylose isomerase domaiN-containing protein tim barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain-containing protein TIM barrel; xylose isomerase domain-containing protein 772107..772994 Cyclobacterium marinum DSM 745 11036987 YP_004772688.1 CDS Cycma_0682 NC_015914.1 773233 774399 R PFAM: Glycosyl transferase 4; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: mtt:Ftrac_2655 hypothetical protein; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; glycosyl transferase family protein complement(773233..774399) Cyclobacterium marinum DSM 745 11036988 YP_004772689.1 CDS Cycma_0684 NC_015914.1 775484 777160 R KEGG: shg:Sph21_1808 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(775484..777160) Cyclobacterium marinum DSM 745 11036990 YP_004772690.1 CDS Cycma_0685 NC_015914.1 777177 777641 R PFAM: Glycosyltransferase 28 C-terminal domain; COGs: COG5017 conserved hypothetical protein; InterPro IPR007235; KEGG: sse:Ssed_2976 hypothetical protein; PFAM: Glycosyl transferase, family 28, C-terminal; SPTR: WcnO; glycosyltransferase domain-containing protein complement(777177..777641) Cyclobacterium marinum DSM 745 11036991 YP_004772691.1 CDS Cycma_0686 NC_015914.1 777638 778129 R PFAM: Oligosaccharide biosynthesis protein Alg14 like; InterPro IPR013969; KEGG: sse:Ssed_2977 hypothetical protein; PFAM: Oligosaccharide biosynthesis protein Alg14 like; SPTR: N terminus subunit of GlcA transferase; oligosaccharide biosynthesis protein Alg14 like protein complement(777638..778129) Cyclobacterium marinum DSM 745 11036992 YP_004772692.1 CDS Cycma_0687 NC_015914.1 778129 778995 R PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: mjl:Mjls_0960 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase complement(778129..778995) Cyclobacterium marinum DSM 745 11036993 YP_004772693.1 CDS Cycma_0688 NC_015914.1 778997 780184 R PFAM: O-Antigen ligase; KEGG: sku:Sulku_2128 O-antigen polymerase; SPTR: O-antigen polymerase; hypothetical protein complement(778997..780184) Cyclobacterium marinum DSM 745 11036994 YP_004772694.1 CDS Cycma_0689 NC_015914.1 780195 781151 R PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ssm:Spirs_4256 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase complement(780195..781151) Cyclobacterium marinum DSM 745 11036995 YP_004772695.1 CDS Cycma_0690 NC_015914.1 781144 782274 R PFAM: Chain length determinant protein; InterPro IPR003856; KEGG: pdi:BDI_1145 protein involved in capsular polysaccharide biosynthesis; PFAM: Lipopolysaccharide biosynthesis; SPTR: uncharacterized protein; lipopolysaccharide biosynthesis protein complement(781144..782274) Cyclobacterium marinum DSM 745 11036996 YP_004772696.1 CDS Cycma_0691 NC_015914.1 782286 783191 R PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: shg:Sph21_2017 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; family 2 glycosyl transferase complement(782286..783191) Cyclobacterium marinum DSM 745 11036997 YP_004772697.1 CDS Cycma_0692 NC_015914.1 783373 785994 R PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: psn:Pedsa_3227 polysaccharide export protein; PFAM: Soluble ligand binding domain; Polysaccharide export protein; SPTR: polysaccharide biosynthesis protein; soluble ligand binding domain-containing protein complement(783373..785994) Cyclobacterium marinum DSM 745 11036998 YP_004772698.1 CDS Cycma_0693 NC_015914.1 786488 787627 R PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368:IPR001509; KEGG: psn:Pedsa_3226 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase complement(786488..787627) Cyclobacterium marinum DSM 745 11036999 YP_004772699.1 CDS Cycma_0694 NC_015914.1 787671 788624 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: zpr:ZPR_0544 GDP-fucose synthetase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-L-fucose synthase; NAD-dependent epimerase/dehydratase complement(787671..788624) Cyclobacterium marinum DSM 745 11037000 YP_004772700.1 CDS Cycma_0695 NC_015914.1 788629 789624 R PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR001538; KEGG: fjo:Fjoh_0355 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal; SPTR: ATP phosphoribosyltransferase; nucleotidyl transferase complement(788629..789624) Cyclobacterium marinum DSM 745 11037001 YP_004772701.1 CDS Cycma_0696 NC_015914.1 789999 790502 D PFAM: Transcription termination factor nusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645; KEGG: phe:Phep_3892 NGN domain-containing protein; PFAM: Transcription antitermination protein, NusG, N-terminal; SPTR: NusG antitermination factor; NusG antitermination factor 789999..790502 Cyclobacterium marinum DSM 745 11037002 YP_004772702.1 CDS Cycma_0697 NC_015914.1 790625 792412 D PFAM: Glycosyl hydrolases family 15; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: psn:Pedsa_2994 glycoside hydrolase 15-related protein; PFAM: Glycoside hydrolase 15-related; SPTR: Glycosyl hydrolase, family 15; glycoside hydrolase 15-like protein 790625..792412 Cyclobacterium marinum DSM 745 11037003 YP_004772703.1 CDS Cycma_0698 NC_015914.1 792402 792800 R KEGG: cly:Celly_1525 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(792402..792800) Cyclobacterium marinum DSM 745 11037004 YP_004772704.1 CDS Cycma_0699 NC_015914.1 792992 793336 D PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: zpr:ZPR_4015 single-stranded DNA-binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 792992..793336 Cyclobacterium marinum DSM 745 11037005 YP_004772705.1 CDS Cycma_0700 NC_015914.1 793669 793965 D PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: cja:CJA_3530 Tat (twin-arginine translocation) pathway signal sequence domain protein; PFAM: Stress responsive alpha-beta barrel; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; stress responsive alpha-beta barrel domain-containing protein 793669..793965 Cyclobacterium marinum DSM 745 11037006 YP_004772706.1 CDS Cycma_0701 NC_015914.1 794006 794548 R PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease hslV; InterPro IPR001353; KEGG: mtt:Ftrac_0741 ATP dependent peptidase codwx, codw component; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent protease subunit HslV; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease hslV complement(794006..794548) Cyclobacterium marinum DSM 745 11037007 YP_004772707.1 CDS Cycma_0702 NC_015914.1 794639 796291 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR006257:IPR000089:IPR004167:IPR001078; KEGG: mtt:Ftrac_0743 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: Dihydrolipoamide acetyltransferase, long form; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(794639..796291) Cyclobacterium marinum DSM 745 11037008 YP_004772708.1 CDS Cycma_0703 NC_015914.1 796414 797382 D PFAM: alpha/beta hydrolase fold; COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: caa:Caka_2610 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase; alpha/beta hydrolase 796414..797382 Cyclobacterium marinum DSM 745 11037009 YP_004772709.1 CDS Cycma_0704 NC_015914.1 797401 798099 D PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: chu:CHU_1864 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: uncharacterized protein; hypothetical protein 797401..798099 Cyclobacterium marinum DSM 745 11037010 YP_004772710.1 CDS Cycma_0705 NC_015914.1 798099 799001 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: wvi:Weevi_1684 beta-lactamase; SPTR: Beta-lactamase domain protein; beta-lactamase 798099..799001 Cyclobacterium marinum DSM 745 11037011 YP_004772711.1 CDS Cycma_0706 NC_015914.1 799764 800801 D PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: sli:Slin_2458 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 799764..800801 Cyclobacterium marinum DSM 745 11037012 YP_004772712.1 CDS Cycma_0707 NC_015914.1 800868 801710 D PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: O-antigen export system, permease; ABC transporter 800868..801710 Cyclobacterium marinum DSM 745 11037013 YP_004772713.1 CDS Cycma_0708 NC_015914.1 801720 803027 D PFAM: ABC transporter; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: Teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 801720..803027 Cyclobacterium marinum DSM 745 11037014 YP_004772714.1 CDS Cycma_0709 NC_015914.1 803057 804037 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyn:Cyan7425_1730 family 2 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 803057..804037 Cyclobacterium marinum DSM 745 11037015 YP_004772715.1 CDS Cycma_0710 NC_015914.1 804091 805698 D PFAM: Methyltransferase domain; Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173:IPR013216; KEGG: met:M446_3307 glycosyl transferase; PFAM: Glycosyl transferase, family 2; Methyltransferase type 11; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 804091..805698 Cyclobacterium marinum DSM 745 11037016 YP_004772716.1 CDS Cycma_0711 NC_015914.1 805698 806720 D PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: sli:Slin_2459 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; polysaccharide deacetylase 805698..806720 Cyclobacterium marinum DSM 745 11037017 YP_004772717.1 CDS Cycma_0712 NC_015914.1 806746 808005 R PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: sli:Slin_2462 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase complement(806746..808005) Cyclobacterium marinum DSM 745 11037018 YP_004772718.1 CDS Cycma_0713 NC_015914.1 808072 808917 R PFAM: Exostosin family; KEGG: dat:HRM2_08030 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(808072..808917) Cyclobacterium marinum DSM 745 11037019 YP_004772719.1 CDS Cycma_0714 NC_015914.1 809141 810955 R PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_2029 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; ABC transporter complement(809141..810955) Cyclobacterium marinum DSM 745 11037020 YP_004772720.1 CDS Cycma_0715 NC_015914.1 811143 812537 R PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: ate:Athe_0062 undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(811143..812537) Cyclobacterium marinum DSM 745 11037021 YP_004772721.1 CDS Cycma_0716 NC_015914.1 813360 815777 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: zpr:ZPR_1092 Ptk-like tyrosine-protein kinase; SPTR: tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; capsular exopolysaccharide family protein 813360..815777 Cyclobacterium marinum DSM 745 11037022 YP_004772722.1 CDS Cycma_0717 NC_015914.1 815864 817156 D KEGG: dol:Dole_1834 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 815864..817156 Cyclobacterium marinum DSM 745 11037023 YP_004772723.1 CDS Cycma_0718 NC_015914.1 817246 818208 D PFAM: Sulfotransferase domain; InterPro IPR000863; KEGG: amr:AM1_5716 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase domain-containing protein; sulfotransferase 817246..818208 Cyclobacterium marinum DSM 745 11037024 YP_004772724.1 CDS Cycma_0719 NC_015914.1 818279 819298 D PFAM: Protein of unknown function (DUF354); COGs: COG1817 conserved hypothetical protein; InterPro IPR007152; KEGG: mbu:Mbur_0720 hypothetical protein; PFAM: Protein of unknown function DUF354; SPTR: uncharacterized protein; hypothetical protein 818279..819298 Cyclobacterium marinum DSM 745 11037025 YP_004772725.1 CDS Cycma_0720 NC_015914.1 819303 820610 D PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: app:CAP2UW1_0858 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: GDP-mannose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 819303..820610 Cyclobacterium marinum DSM 745 11037026 YP_004772726.1 CDS Cycma_0721 NC_015914.1 820726 821718 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_1126 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; group 1 glycosyl transferase complement(820726..821718) Cyclobacterium marinum DSM 745 11037027 YP_004772727.1 CDS Cycma_0722 NC_015914.1 821942 823009 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; KEGG: ppn:Palpr_1126 glycosyl transferase group 1; SPTR: uncharacterized protein; group 1 glycosyl transferase complement(821942..823009) Cyclobacterium marinum DSM 745 11037028 YP_004772728.1 CDS Cycma_0723 NC_015914.1 823794 824693 R PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: pdi:BDI_0038 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: uncharacterized protein; polysaccharide deacetylase complement(823794..824693) Cyclobacterium marinum DSM 745 11037029 YP_004772729.1 CDS Cycma_0724 NC_015914.1 824715 826334 R COGs: COG5653 Protein involved in cellulose biosynthesis (CelD); protein involved in cellulose biosynthesis complement(824715..826334) Cyclobacterium marinum DSM 745 11037030 YP_004772730.1 CDS Cycma_0725 NC_015914.1 826511 828019 R SPTR: uncharacterized protein; hypothetical protein complement(826511..828019) Cyclobacterium marinum DSM 745 11037031 YP_004772731.1 CDS Cycma_0726 NC_015914.1 828180 829292 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dtu:Dtur_0587 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase complement(828180..829292) Cyclobacterium marinum DSM 745 11037032 YP_004772732.1 CDS Cycma_0727 NC_015914.1 829892 839356 R PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; Fibronectin type III domain; InterPro IPR006652:IPR003961:IPR006558:IPR008009; KEGG: rbi:RB2501_12909 ring canal kelch-like protein; PFAM: Fibronectin, type III; Ig; Kelch repeat type 1; SMART: LamG-like jellyroll fold; Kelch repeat type 1; Fibronectin, type III; SPTR: Ring canal kelch-like protein; fibronectin type III complement(829892..839356) Cyclobacterium marinum DSM 745 11037033 YP_004772733.1 CDS Cycma_0728 NC_015914.1 840127 842115 R InterPro IPR006558; KEGG: gvi:gll4265 hypothetical protein; SMART: LamG-like jellyroll fold; SPTR: lipoprotein; LamG domain-containing protein complement(840127..842115) Cyclobacterium marinum DSM 745 11037034 YP_004772734.1 CDS Cycma_0729 NC_015914.1 842869 843840 R PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ppn:Palpr_1129 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: WfaY protein; family 2 glycosyl transferase complement(842869..843840) Cyclobacterium marinum DSM 745 11037035 YP_004772735.1 CDS Cycma_0730 NC_015914.1 843876 844700 R KEGG: gvi:gll4265 hypothetical protein; SPTR: Gll4265 protein; hypothetical protein complement(843876..844700) Cyclobacterium marinum DSM 745 11037036 YP_004772736.1 CDS Cycma_0731 NC_015914.1 845090 846199 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pdi:BDI_0033 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase 4; group 1 glycosyl transferase 845090..846199 Cyclobacterium marinum DSM 745 11037037 YP_004772737.1 CDS Cycma_0732 NC_015914.1 846329 847456 D PFAM: Polysaccharide pyruvyl transferase; KEGG: dfe:Dfer_0060 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 846329..847456 Cyclobacterium marinum DSM 745 11037038 YP_004772738.1 CDS Cycma_0733 NC_015914.1 847962 849776 R PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_2029 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; ABC transporter complement(847962..849776) Cyclobacterium marinum DSM 745 11037039 YP_004772739.1 CDS Cycma_0734 NC_015914.1 849990 854798 R PFAM: Bacterial Ig-like domain (group 2); Fibronectin type III domain; COGs: COG5492 Bacterial surface protein containing Ig-like domains; InterPro IPR003343:IPR003961; KEGG: dae:Dtox_1961 Ig domain-containing protein group 2 domain-containing protein; PFAM: Bacterial Ig-like, group 2; Fibronectin, type III; SMART: Bacterial Ig-like, group 2; Fibronectin, type III; SPTR: Ig domain protein group 2 domain protein; Ig domain-containing protein complement(849990..854798) Cyclobacterium marinum DSM 745 11037040 YP_004772740.1 CDS Cycma_0735 NC_015914.1 855685 855864 R hypothetical protein complement(855685..855864) Cyclobacterium marinum DSM 745 11037041 YP_004772741.1 CDS Cycma_0736 NC_015914.1 856178 857176 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: mtt:Ftrac_0753 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 2; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); 3-oxoacyl-ACP synthase 856178..857176 Cyclobacterium marinum DSM 745 11037042 YP_004772742.1 CDS Cycma_0737 NC_015914.1 857119 857778 D SPTR: uncharacterized protein; hypothetical protein 857119..857778 Cyclobacterium marinum DSM 745 11037043 YP_004772743.1 CDS Cycma_0738 NC_015914.1 857929 859512 D PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: chu:CHU_2455 glucosyltransferase-S; SPTR: uncharacterized protein; hypothetical protein 857929..859512 Cyclobacterium marinum DSM 745 11037044 YP_004772744.1 CDS Cycma_0739 NC_015914.1 859557 859733 D KEGG: mtt:Ftrac_0750 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 859557..859733 Cyclobacterium marinum DSM 745 11037045 YP_004772745.1 CDS Cycma_0740 NC_015914.1 859888 861291 D KEGG: shg:Sph21_3033 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 859888..861291 Cyclobacterium marinum DSM 745 11037046 YP_004772746.1 CDS Cycma_0741 NC_015914.1 861580 862503 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable IolI protein; xylose isomerase domain-containing protein complement(861580..862503) Cyclobacterium marinum DSM 745 11037047 YP_004772747.1 CDS Cycma_0742 NC_015914.1 862939 864450 D hypothetical protein 862939..864450 Cyclobacterium marinum DSM 745 11037048 YP_004772748.1 CDS Cycma_0743 NC_015914.1 864439 869490 R KEGG: mtt:Ftrac_3437 hypothetical protein; SPTR: outer membrane insertion C-signal; hypothetical protein complement(864439..869490) Cyclobacterium marinum DSM 745 11037049 YP_004772749.1 CDS Cycma_0744 NC_015914.1 869477 870583 R KEGG: chu:CHU_1567 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(869477..870583) Cyclobacterium marinum DSM 745 11037050 YP_004772750.1 CDS Cycma_0745 NC_015914.1 870975 871313 D PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: lby:Lbys_2903 transcriptional regulator, PadR family; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR family; PadR-like family transcriptional regulator 870975..871313 Cyclobacterium marinum DSM 745 11037051 YP_004772751.1 CDS Cycma_0746 NC_015914.1 871364 873262 D PFAM: PspC domain; InterPro IPR007168; KEGG: mtt:Ftrac_1338 phage shock protein C, PspC; PFAM: PspC; SPTR: PspC domain protein; PspC domain-containing protein 871364..873262 Cyclobacterium marinum DSM 745 11037052 YP_004772752.1 CDS Cycma_0747 NC_015914.1 873645 875045 D PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: mtt:Ftrac_1340 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase 873645..875045 Cyclobacterium marinum DSM 745 11037053 YP_004772753.1 CDS Cycma_0748 NC_015914.1 875096 875566 D KEGG: geo:Geob_3254 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 875096..875566 Cyclobacterium marinum DSM 745 11037054 YP_004772754.1 CDS Cycma_0749 NC_015914.1 875687 876259 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: dfe:Dfer_3459 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 875687..876259 Cyclobacterium marinum DSM 745 11037055 YP_004772755.1 CDS Cycma_0750 NC_015914.1 876249 876995 D SPTR: uncharacterized protein; hypothetical protein 876249..876995 Cyclobacterium marinum DSM 745 11037056 YP_004772756.1 CDS Cycma_0751 NC_015914.1 877012 878037 D KEGG: dfe:Dfer_3457 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 877012..878037 Cyclobacterium marinum DSM 745 11037057 YP_004772757.1 CDS Cycma_0752 NC_015914.1 878059 878979 D KEGG: acl:ACL_1380 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 878059..878979 Cyclobacterium marinum DSM 745 11037058 YP_004772758.1 CDS Cycma_0753 NC_015914.1 879040 879552 R SPTR: uncharacterized protein; hypothetical protein complement(879040..879552) Cyclobacterium marinum DSM 745 11037059 YP_004772759.1 CDS Cycma_0754 NC_015914.1 879552 880649 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: mtt:Ftrac_1596 oxidoreductase fad/nad(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin; SPTR: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(879552..880649) Cyclobacterium marinum DSM 745 11037060 YP_004772760.1 CDS Cycma_0755 NC_015914.1 880853 881593 D KEGG: cpi:Cpin_5822 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 880853..881593 Cyclobacterium marinum DSM 745 11037061 YP_004772761.1 CDS Cycma_0756 NC_015914.1 881729 883072 D PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR000362:IPR013539; KEGG: lby:Lbys_2961 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; manually curated; adenylosuccinate lyase 881729..883072 Cyclobacterium marinum DSM 745 11037062 YP_004772762.1 CDS Cycma_0757 NC_015914.1 883420 885477 R PFAM: Heparinase II/III-like protein; InterPro IPR012480; KEGG: amr:AM1_1276 hypothetical protein; PFAM: Heparinase II/III-like; SPTR: uncharacterized protein; heparinase II/III family protein complement(883420..885477) Cyclobacterium marinum DSM 745 11037063 YP_004772763.1 CDS Cycma_0758 NC_015914.1 885556 886098 R SPTR: uncharacterized protein; hypothetical protein complement(885556..886098) Cyclobacterium marinum DSM 745 11037064 YP_004772764.1 CDS Cycma_0759 NC_015914.1 886245 886418 R KEGG: zpr:ZPR_1182 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(886245..886418) Cyclobacterium marinum DSM 745 11037065 YP_004772765.1 CDS Cycma_0760 NC_015914.1 886424 886906 R SPTR: uncharacterized protein; hypothetical protein complement(886424..886906) Cyclobacterium marinum DSM 745 11037066 YP_004772766.1 CDS Cycma_0761 NC_015914.1 886909 887757 R PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: gfo:GFO_2349 band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: SPFH domain / Band 7 family protein; hypothetical protein complement(886909..887757) Cyclobacterium marinum DSM 745 11037067 YP_004772767.1 CDS Cycma_0762 NC_015914.1 888118 889347 D PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: sli:Slin_3437 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein 888118..889347 Cyclobacterium marinum DSM 745 11037068 YP_004772768.1 CDS Cycma_0763 NC_015914.1 889683 890798 D PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: slt:Slit_1240 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS 889683..890798 Cyclobacterium marinum DSM 745 11037069 YP_004772769.1 CDS Cycma_0764 NC_015914.1 891614 896194 D PFAM: Di-glucose binding within endoplasmic reticulum; InterPro IPR006626:IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR: uncharacterized protein; carbohydrate-binding CenC domain-containing protein 891614..896194 Cyclobacterium marinum DSM 745 11037070 YP_004772770.1 CDS Cycma_0765 NC_015914.1 897167 901831 D PFAM: Di-glucose binding within endoplasmic reticulum; InterPro IPR006626; KEGG: parallel beta-helix repeat-containing protein; SPTR: Glycosyl hydrolase 98 carbohydrate binding module; TIGRFAM: parallel beta-helix repeat containing protein; parallel beta-helix repeat containing protein 897167..901831 Cyclobacterium marinum DSM 745 11037071 YP_004772771.1 CDS Cycma_0766 NC_015914.1 901960 903075 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family; group 1 glycosyl transferase complement(901960..903075) Cyclobacterium marinum DSM 745 11037072 YP_004772772.1 CDS Cycma_0767 NC_015914.1 903089 904051 R PFAM: Exostosin family; KEGG: rmr:Rmar_1143 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(903089..904051) Cyclobacterium marinum DSM 745 11037073 YP_004772773.1 CDS Cycma_0768 NC_015914.1 904122 905225 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bvu:BVU_0890 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; group 1 glycosyl transferase complement(904122..905225) Cyclobacterium marinum DSM 745 11037074 YP_004772774.1 CDS Cycma_0769 NC_015914.1 905247 906008 R PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: vcj:VCD_003407 N-acetylmannosaminyltransferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; SPTR: Beta-1,4-N-acetyl-mannosaminyltransferase, ; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(905247..906008) Cyclobacterium marinum DSM 745 11037075 YP_004772775.1 CDS Cycma_0770 NC_015914.1 906107 907315 R KEGG: bvu:BVU_1546 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(906107..907315) Cyclobacterium marinum DSM 745 11037076 YP_004772776.1 CDS Cycma_0771 NC_015914.1 907577 908689 R KEGG: pth:PTH_2582 glycosyltransferase; SPTR: glycosyltransferase; hypothetical protein complement(907577..908689) Cyclobacterium marinum DSM 745 11037077 YP_004772777.1 CDS Cycma_0772 NC_015914.1 908929 911091 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; Zinc-binding dehydrogenase; COGs: COG0673 dehydrogenase and related protein; InterPro IPR013149:IPR000683; KEGG: aba:Acid345_3794 zinc-binding alcohol dehydrogenase; PFAM: Oxidoreductase, N-terminal; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase, zinc-binding protein; oxidoreductase domain-containing protein complement(908929..911091) Cyclobacterium marinum DSM 745 11037078 YP_004772778.1 CDS Cycma_0773 NC_015914.1 911119 912126 R KEGG: bfr:BF4506 glycosyltransferase; SPTR: exopolysaccharide biosynthesis protein; glycosyltransferase complement(911119..912126) Cyclobacterium marinum DSM 745 11037079 YP_004772779.1 CDS Cycma_0774 NC_015914.1 912128 913459 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; group 1 glycosyl transferase complement(912128..913459) Cyclobacterium marinum DSM 745 11037080 YP_004772780.1 CDS Cycma_0775 NC_015914.1 913503 914540 R hypothetical protein complement(913503..914540) Cyclobacterium marinum DSM 745 11037081 YP_004772781.1 CDS Cycma_0776 NC_015914.1 914576 915841 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(914576..915841) Cyclobacterium marinum DSM 745 11037082 YP_004772782.1 CDS Cycma_0777 NC_015914.1 915847 917136 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase 4; group 1 glycosyl transferase complement(915847..917136) Cyclobacterium marinum DSM 745 11037083 YP_004772783.1 CDS Cycma_0778 NC_015914.1 917124 918500 R PFAM: Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: LPS biosynthesis related polysaccharide transporter/flippase; polysaccharide biosynthesis protein complement(917124..918500) Cyclobacterium marinum DSM 745 11037084 YP_004772784.1 CDS Cycma_0779 NC_015914.1 918537 920903 R PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: shg:Sph21_1810 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; SPTR: Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein; capsular exopolysaccharide family protein complement(918537..920903) Cyclobacterium marinum DSM 745 11037085 YP_004772785.1 CDS Cycma_0780 NC_015914.1 920972 921772 R PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: shg:Sph21_1809 soluble ligand binding domain; PFAM: Soluble ligand binding domain; SPTR: Polysaccharide export protein; soluble ligand binding domain-containing protein complement(920972..921772) Cyclobacterium marinum DSM 745 11037086 YP_004772786.1 CDS Cycma_0781 NC_015914.1 922215 922922 R PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: zpr:ZPR_0565 glycosyltransferase; PFAM: Bacterial sugar transferase; SPTR: Capsular polysaccharide biosynthesis protein; sugar transferase complement(922215..922922) Cyclobacterium marinum DSM 745 11037087 YP_004772787.1 CDS Cycma_0782 NC_015914.1 923028 923126 D hypothetical protein 923028..923126 Cyclobacterium marinum DSM 745 11037088 YP_004772788.1 CDS Cycma_0783 NC_015914.1 923233 923925 R PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: cat:CA2559_02960 glycosyltransferase; PFAM: Bacterial sugar transferase; SPTR: sugar transferase; sugar transferase complement(923233..923925) Cyclobacterium marinum DSM 745 11037089 YP_004772789.1 CDS Cycma_0784 NC_015914.1 924138 925175 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361:IPR000257; KEGG: mtt:Ftrac_1932 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE; uroporphyrinogen decarboxylase complement(924138..925175) Cyclobacterium marinum DSM 745 11037090 YP_004772790.1 CDS Cycma_0785 NC_015914.1 925291 925839 R KEGG: fbc:FB2170_15348 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(925291..925839) Cyclobacterium marinum DSM 745 11037091 YP_004772791.1 CDS Cycma_0786 NC_015914.1 925982 926518 R KEGG: rbi:RB2501_12652 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(925982..926518) Cyclobacterium marinum DSM 745 11037092 YP_004772792.1 CDS Cycma_0787 NC_015914.1 926643 927161 R SPTR: uncharacterized protein; hypothetical protein complement(926643..927161) Cyclobacterium marinum DSM 745 11037093 YP_004772793.1 CDS Cycma_0788 NC_015914.1 927161 927763 R SPTR: uncharacterized protein; hypothetical protein complement(927161..927763) Cyclobacterium marinum DSM 745 11037094 YP_004772794.1 CDS Cycma_0789 NC_015914.1 927955 929730 R PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: mtt:Ftrac_2126 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, permease/ATP-binding protein; ABC transporter complement(927955..929730) Cyclobacterium marinum DSM 745 11037095 YP_004772795.1 CDS Cycma_0790 NC_015914.1 929742 930575 R PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: gfo:GFO_0425 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A 1; TIGRFAM: Pseudouridine synthase I, TruA; tRNA pseudouridine synthase A complement(929742..930575) Cyclobacterium marinum DSM 745 11037096 YP_004772796.1 CDS Cycma_0791 NC_015914.1 930581 931078 D KEGG: sli:Slin_4489 hypothetical protein; SPTR: Lipoprotein; hypothetical protein 930581..931078 Cyclobacterium marinum DSM 745 11037097 YP_004772797.1 CDS Cycma_0792 NC_015914.1 931132 932247 D PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: psn:Pedsa_1154 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine gamma-synthase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 931132..932247 Cyclobacterium marinum DSM 745 11037098 YP_004772798.1 CDS Cycma_0793 NC_015914.1 932250 932711 R PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: mtt:Ftrac_2564 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: uncharacterized protein; hypothetical protein complement(932250..932711) Cyclobacterium marinum DSM 745 11037099 YP_004772799.1 CDS Cycma_0794 NC_015914.1 932845 934383 R PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR003593:IPR000523; KEGG: mtt:Ftrac_2624 mg chelatase, subunit chli; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Mg chelatase-like protein; TIGRFAM: Mg chelatase-related protein; Mg chelatase subunit ChlI complement(932845..934383) Cyclobacterium marinum DSM 745 11037100 YP_004772800.1 CDS Cycma_0795 NC_015914.1 934433 934786 R PFAM: Protein of unknown function, DUF485; SPTR: uncharacterized protein; hypothetical protein complement(934433..934786) Cyclobacterium marinum DSM 745 11037101 YP_004772801.1 CDS Cycma_0796 NC_015914.1 934820 936652 R PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: mtt:Ftrac_2621 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MsbA family; ABC transporter complement(934820..936652) Cyclobacterium marinum DSM 745 11037102 YP_004772802.1 CDS Cycma_0797 NC_015914.1 936681 936791 D hypothetical protein 936681..936791 Cyclobacterium marinum DSM 745 11037103 YP_004772803.1 CDS Cycma_0798 NC_015914.1 936914 938584 R KEGG: mtt:Ftrac_2620 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(936914..938584) Cyclobacterium marinum DSM 745 11037104 YP_004772804.1 CDS Cycma_0799 NC_015914.1 938797 939042 D PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; COGs: COG0254 Ribosomal protein L31; HAMAP: 50S ribosomal protein L31 type B; InterPro IPR002150; KEGG: aas:Aasi_0758 hypothetical protein; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31 type B; TIGRFAM: Ribosomal protein L31; 50S ribosomal protein L31 938797..939042 Cyclobacterium marinum DSM 745 11037105 YP_004772805.1 CDS Cycma_0800 NC_015914.1 939115 940320 D TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; InterPro IPR001451; KEGG: mtt:Ftrac_2618 transferase hexapeptide repeat containing protein; SPTR: uncharacterized protein; transferase hexapeptide repeat containing protein 939115..940320 Cyclobacterium marinum DSM 745 11037106 YP_004772806.1 CDS Cycma_0801 NC_015914.1 940331 941452 D TIGRFAM: DNA polymerase III, delta' subunit; COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: chu:CHU_0491 DNA polymerase III gamma/tau subunit; SPTR: DNA polymerase III gamma/tau subunit; DNA polymerase III subunit gamma/tau 940331..941452 Cyclobacterium marinum DSM 745 11037107 YP_004772807.1 CDS Cycma_0802 NC_015914.1 941509 941937 D PFAM: Protein of unknown function (DUF785); COGs: COG4067 conserved hypothetical protein; InterPro IPR008503; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF785; SPTR: Ribosomal protein S6 modification protein; hypothetical protein 941509..941937 Cyclobacterium marinum DSM 745 11037108 YP_004772808.1 CDS Cycma_0803 NC_015914.1 941934 942842 D PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR004666:IPR013651; KEGG: mtt:Ftrac_1140 SSU ribosomal protein s6p modification protein; PFAM: ATP-grasp fold, RimK-type; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK; RimK family alpha-L-glutamate ligase 941934..942842 Cyclobacterium marinum DSM 745 11037109 YP_004772809.1 CDS Cycma_0804 NC_015914.1 942842 943780 D PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; COGs: COG0181 Porphobilinogen deaminase; HAMAP: Porphobilinogen deaminase; InterPro IPR000860; KEGG: mtt:Ftrac_2767 hydroxymethylbilane synthase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; SPTR: Hydroxymethylbilane synthase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase 942842..943780 Cyclobacterium marinum DSM 745 11037110 YP_004772810.1 CDS Cycma_0805 NC_015914.1 943773 944624 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: mtt:Ftrac_2768 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 943773..944624 Cyclobacterium marinum DSM 745 11037111 YP_004772811.1 CDS Cycma_0806 NC_015914.1 944599 945546 D PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: mtt:Ftrac_2769 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 944599..945546 Cyclobacterium marinum DSM 745 11037112 YP_004772812.1 CDS Cycma_0807 NC_015914.1 945588 946979 D PFAM: Sodium:neurotransmitter symporter family; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: rmr:Rmar_2112 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter; sodium:neurotransmitter symporter 945588..946979 Cyclobacterium marinum DSM 745 11037113 YP_004772813.1 CDS Cycma_0808 NC_015914.1 947163 947723 R PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: psn:Pedsa_2514 protein of unknown function DUF583; PFAM: Protein of unknown function DUF583; SPTR: uncharacterized protein; hypothetical protein complement(947163..947723) Cyclobacterium marinum DSM 745 11037114 YP_004772814.1 CDS Cycma_0809 NC_015914.1 947728 948756 R KEGG: osp:Odosp_0670 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(947728..948756) Cyclobacterium marinum DSM 745 11037115 YP_004772815.1 CDS Cycma_0810 NC_015914.1 949105 949698 D KEGG: mtt:Ftrac_1015 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 949105..949698 Cyclobacterium marinum DSM 745 11037116 YP_004772816.1 CDS Cycma_0811 NC_015914.1 949690 950283 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: zpr:ZPR_4235 regulatory protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(949690..950283) Cyclobacterium marinum DSM 745 11037117 YP_004772817.1 CDS Cycma_0812 NC_015914.1 950464 951042 R SPTR: uncharacterized protein; hypothetical protein complement(950464..951042) Cyclobacterium marinum DSM 745 11037118 YP_004772818.1 CDS Cycma_0813 NC_015914.1 951587 952789 R SPTR: uncharacterized protein; hypothetical protein complement(951587..952789) Cyclobacterium marinum DSM 745 11037119 YP_004772819.1 CDS Cycma_0814 NC_015914.1 952948 956049 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_3523 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Drug efflux protein; acriflavin resistance protein complement(952948..956049) Cyclobacterium marinum DSM 745 11037120 YP_004772820.1 CDS Cycma_0815 NC_015914.1 956704 958269 R PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR017705:IPR006675:IPR004087:IPR003607:IPR 018111:IPR006674; KEGG: mtt:Ftrac_2866 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD region; K Homology; SPTR: KH/HDIG domain protein; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG; 2,3 cyclic-nucleotide 2-phosphodiesterase complement(956704..958269) Cyclobacterium marinum DSM 745 11037121 YP_004772821.1 CDS Cycma_0816 NC_015914.1 958341 958625 R PFAM: Cell division protein ZapA; KEGG: mtt:Ftrac_2867 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(958341..958625) Cyclobacterium marinum DSM 745 11037122 YP_004772822.1 CDS Cycma_0817 NC_015914.1 958627 958914 R KEGG: mtt:Ftrac_2868 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(958627..958914) Cyclobacterium marinum DSM 745 11037123 YP_004772823.1 CDS Cycma_0818 NC_015914.1 958916 961327 R PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR004532:IPR002547:IPR005146:IPR005147:IPR 005121; KEGG: sli:Slin_0287 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding region; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; phenylalanyl-tRNA synthetase subunit beta complement(958916..961327) Cyclobacterium marinum DSM 745 11037124 YP_004772824.1 CDS Cycma_0819 NC_015914.1 961382 961999 R PFAM: Protein of unknown function (DUF1684); COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: sli:Slin_0288 hypothetical protein; PFAM: Protein of unknown function DUF1684; SPTR: secreted protein; hypothetical protein complement(961382..961999) Cyclobacterium marinum DSM 745 11037125 YP_004772825.1 CDS Cycma_0820 NC_015914.1 962006 962701 R PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: psn:Pedsa_3781 DNA replication and repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; DNA repair protein RadC complement(962006..962701) Cyclobacterium marinum DSM 745 11037126 YP_004772826.1 CDS Cycma_0821 NC_015914.1 962878 963177 R PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: phe:Phep_0819 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; 30S ribosomal protein S20 complement(962878..963177) Cyclobacterium marinum DSM 745 11037127 YP_004772827.1 CDS Cycma_0822 NC_015914.1 963295 964362 D PFAM: S1/P1 Nuclease; KEGG: mtt:Ftrac_3091 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 963295..964362 Cyclobacterium marinum DSM 745 11037128 YP_004772828.1 CDS Cycma_0823 NC_015914.1 964253 965584 R PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: chu:CHU_0991 aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, classes I and II; class I and II aminotransferase complement(964253..965584) Cyclobacterium marinum DSM 745 11037129 YP_004772829.1 CDS Cycma_0824 NC_015914.1 965749 967428 R PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2855 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; TIGRFAM: ATP-binding cassette protein, ChvD family; ChvD family ATP-binding protein complement(965749..967428) Cyclobacterium marinum DSM 745 11037130 YP_004772830.1 CDS Cycma_0825 NC_015914.1 967558 968808 D PFAM: Domain of Unknown Function (DUF349); InterPro IPR007139; KEGG: sli:Slin_5235 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: uncharacterized protein; hypothetical protein 967558..968808 Cyclobacterium marinum DSM 745 11037131 YP_004772831.1 CDS Cycma_0826 NC_015914.1 968885 969106 D PFAM: Protein of unknown function (DUF2795); KEGG: dfe:Dfer_3979 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 968885..969106 Cyclobacterium marinum DSM 745 11037132 YP_004772832.1 CDS Cycma_0828 NC_015914.1 969877 970920 R PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: cpi:Cpin_6587 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; ATP-binding region, ATPase-like; SPTR: Signal transduction histidine kinase, LytS; signal transduction histidine kinase complement(969877..970920) Cyclobacterium marinum DSM 745 11037134 YP_004772833.1 CDS Cycma_0829 NC_015914.1 970934 971671 R PFAM: Predicted membrane protein (DUF2154); InterPro IPR016975; KEGG: mtt:Ftrac_1345 hypothetical protein; PFAM: Cell wall-active antibiotics response protein; SPTR: uncharacterized protein; cell wall-active antibiotics response protein complement(970934..971671) Cyclobacterium marinum DSM 745 11037135 YP_004772834.1 CDS Cycma_0830 NC_015914.1 971779 972480 R PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro IPR001228; KEGG: chu:CHU_3100 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(971779..972480) Cyclobacterium marinum DSM 745 11037136 YP_004772835.1 CDS Cycma_0831 NC_015914.1 972487 973137 R PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: fba:FIC_02393 Mn-dependent transcriptional regulator MntR; PFAM: Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Iron repressor protein; DtxR family iron (metal) dependent repressor complement(972487..973137) Cyclobacterium marinum DSM 745 11037137 YP_004772836.1 CDS Cycma_0832 NC_015914.1 973216 974157 D PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: coc:Coch_1616 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: GufA protein; zinc/iron permease 973216..974157 Cyclobacterium marinum DSM 745 11037138 YP_004772837.1 CDS Cycma_0833 NC_015914.1 974165 975145 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: shg:Sph21_3869 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: glycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(974165..975145) Cyclobacterium marinum DSM 745 11037139 YP_004772838.1 CDS Cycma_0834 NC_015914.1 975215 976282 R PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: chu:CHU_0315 aminopeptidase; PFAM: Peptidase M42; SPTR: Aminopeptidase; peptidase M42 family protein complement(975215..976282) Cyclobacterium marinum DSM 745 11037140 YP_004772839.1 CDS Cycma_0835 NC_015914.1 976600 977661 D KEGG: pdi:BDI_3443 lipoprotein; SPTR: uncharacterized protein; hypothetical protein 976600..977661 Cyclobacterium marinum DSM 745 11037141 YP_004772840.1 CDS Cycma_0836 NC_015914.1 977882 978529 R PFAM: haloacid dehalogenase-like hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006439:IPR005834; KEGG: pgi:PG1509 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily hydrolase complement(977882..978529) Cyclobacterium marinum DSM 745 11037142 YP_004772841.1 CDS Cycma_0837 NC_015914.1 978537 979505 R PFAM: Phytanoyl-CoA dioxygenase (PhyH); InterPro IPR008775; KEGG: cpi:Cpin_4379 hypothetical protein; PFAM: Phytanoyl-CoA dioxygenase; SPTR: uncharacterized protein; phytanoyl-CoA dioxygenase complement(978537..979505) Cyclobacterium marinum DSM 745 11037143 YP_004772842.1 CDS Cycma_0838 NC_015914.1 979641 980489 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_4378 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator; AraC family transcriptional regulator 979641..980489 Cyclobacterium marinum DSM 745 11037144 YP_004772843.1 CDS Cycma_0839 NC_015914.1 980486 981613 R PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gfo:GFO_2162 secreted beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Secreted beta-lactamase; beta-lactamase complement(980486..981613) Cyclobacterium marinum DSM 745 11037145 YP_004772844.1 CDS Cycma_0840 NC_015914.1 981678 982058 R KEGG: psn:Pedsa_1463 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(981678..982058) Cyclobacterium marinum DSM 745 11037146 YP_004772845.1 CDS Cycma_0841 NC_015914.1 982130 982429 R PFAM: EthD protein; TIGRFAM: conserved hypothetical protein; InterPro IPR009799; KEGG: bts:Btus_1238 ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR: uncharacterized protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD complement(982130..982429) Cyclobacterium marinum DSM 745 11037147 YP_004772846.1 CDS Cycma_0842 NC_015914.1 982606 983865 R KEGG: sus:Acid_1992 beta-lactamase; SPTR: Beta-lactamase; hypothetical protein complement(982606..983865) Cyclobacterium marinum DSM 745 11037148 YP_004772847.1 CDS Cycma_0843 NC_015914.1 984105 985805 D InterPro IPR006626; KEGG: hch:HCH_04697 hypothetical protein; SPTR: Parallel beta-helix repeat protein; hypothetical protein 984105..985805 Cyclobacterium marinum DSM 745 11037149 YP_004772848.1 CDS Cycma_0844 NC_015914.1 985986 988484 R SPTR: uncharacterized protein; hypothetical protein complement(985986..988484) Cyclobacterium marinum DSM 745 11037150 YP_004772849.1 CDS Cycma_0845 NC_015914.1 989031 990473 D PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: uncharacterized protein; hypothetical protein 989031..990473 Cyclobacterium marinum DSM 745 11037151 YP_004772850.1 CDS Cycma_0846 NC_015914.1 990383 990586 R hypothetical protein complement(990383..990586) Cyclobacterium marinum DSM 745 11037152 YP_004772851.1 CDS Cycma_0847 NC_015914.1 990702 992783 D PFAM: Acetyl xylan esterase (AXE1); COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR006311; KEGG: plm:Plim_1726 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 990702..992783 Cyclobacterium marinum DSM 745 11037153 YP_004772852.1 CDS Cycma_0848 NC_015914.1 992934 993398 R KEGG: fbc:FB2170_11011 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(992934..993398) Cyclobacterium marinum DSM 745 11037154 YP_004772853.1 CDS Cycma_0849 NC_015914.1 993453 994112 R KEGG: fbc:FB2170_11016 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(993453..994112) Cyclobacterium marinum DSM 745 11037155 YP_004772854.1 CDS Cycma_0850 NC_015914.1 994096 994587 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_11021 RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(994096..994587) Cyclobacterium marinum DSM 745 11037156 YP_004772855.1 CDS Cycma_0851 NC_015914.1 994815 995927 R KEGG: sli:Slin_0596 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(994815..995927) Cyclobacterium marinum DSM 745 11037157 YP_004772856.1 CDS Cycma_0852 NC_015914.1 996206 997720 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01941 iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase; sulfatase 996206..997720 Cyclobacterium marinum DSM 745 11037158 YP_004772857.1 CDS Cycma_0853 NC_015914.1 997784 998974 D PFAM: Protein of unknown function (DUF1006); COGs: COG3214 conserved hypothetical protein; InterPro IPR009351; KEGG: fbc:FB2170_11296 hypothetical protein; PFAM: Protein of unknown function DUF1006; SPTR: uncharacterized protein; hypothetical protein 997784..998974 Cyclobacterium marinum DSM 745 11037159 YP_004772858.1 CDS Cycma_0854 NC_015914.1 999207 999314 R hypothetical protein complement(999207..999314) Cyclobacterium marinum DSM 745 11037160 YP_004772859.1 CDS Cycma_0855 NC_015914.1 999328 1000725 R PFAM: BlaR1 peptidase M56; InterPro IPR008756; KEGG: sli:Slin_3430 peptidase M56 BlaR1; PFAM: Peptidase M56, BlaR1; SPTR: Peptidase M56 BlaR1; peptidase M56 BlaR1 complement(999328..1000725) Cyclobacterium marinum DSM 745 11037161 YP_004772860.1 CDS Cycma_0856 NC_015914.1 1001210 1004464 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2719 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 1001210..1004464 Cyclobacterium marinum DSM 745 11037162 YP_004772861.1 CDS Cycma_0857 NC_015914.1 1004475 1005911 D KEGG: dfe:Dfer_2720 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 1004475..1005911 Cyclobacterium marinum DSM 745 11037163 YP_004772862.1 CDS Cycma_0858 NC_015914.1 1006142 1007494 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rbi:RB2501_09050 outer membrane protein-like protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein-like protein; outer membrane efflux protein complement(1006142..1007494) Cyclobacterium marinum DSM 745 11037164 YP_004772863.1 CDS Cycma_0859 NC_015914.1 1007499 1010660 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: gfo:GFO_3008 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: RND family efflux transporter; acriflavin resistance protein complement(1007499..1010660) Cyclobacterium marinum DSM 745 11037165 YP_004772864.1 CDS Cycma_0860 NC_015914.1 1010717 1011835 R TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_3009 HlyD family secretion protein; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1010717..1011835) Cyclobacterium marinum DSM 745 11037166 YP_004772865.1 CDS Cycma_0861 NC_015914.1 1011841 1012314 R PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: fbc:FB2170_08719 MarR family regulatory protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: MarR-family regulatory protein; MarR family transcriptional regulator complement(1011841..1012314) Cyclobacterium marinum DSM 745 11037167 YP_004772866.1 CDS Cycma_0862 NC_015914.1 1012969 1013904 R PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0531 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(1012969..1013904) Cyclobacterium marinum DSM 745 11037168 YP_004772867.1 CDS Cycma_0863 NC_015914.1 1014293 1014832 R PFAM: Lipocalin-like domain; COGs: COG3040 Bacterial lipocalin; InterPro IPR013208; KEGG: ppn:Palpr_0368 lipocalin family protein; PFAM: Lipocalin-like; SPTR: Lipocalin family protein; lipocalin family protein complement(1014293..1014832) Cyclobacterium marinum DSM 745 11037169 YP_004772868.1 CDS Cycma_0864 NC_015914.1 1015366 1016331 D PFAM: Ppx/GppA phosphatase; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: mtt:Ftrac_3065 ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Exopolyphosphatase; Ppx/GppA phosphatase 1015366..1016331 Cyclobacterium marinum DSM 745 11037170 YP_004772869.1 CDS Cycma_0865 NC_015914.1 1016407 1017477 D PFAM: Malate/L-lactate dehydrogenase; COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: cpi:Cpin_6875 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; SPTR: Malate dehydrogenase; malate/L-lactate dehydrogenase 1016407..1017477 Cyclobacterium marinum DSM 745 11037171 YP_004772870.1 CDS Cycma_0866 NC_015914.1 1017493 1018743 D COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: nmr:Nmar_0572 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1017493..1018743 Cyclobacterium marinum DSM 745 11037172 YP_004772871.1 CDS Cycma_0867 NC_015914.1 1018913 1021105 R PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: syp:SYNPCC7002_G0123 bumetanide-sensitive Na-K-Cl cotransporter; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease; amino acid permease complement(1018913..1021105) Cyclobacterium marinum DSM 745 11037173 YP_004772872.1 CDS Cycma_0868 NC_015914.1 1021301 1023058 R KEGG: caa:Caka_1250 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1021301..1023058) Cyclobacterium marinum DSM 745 11037174 YP_004772873.1 CDS Cycma_0869 NC_015914.1 1023325 1025391 D PFAM: Peptidase M13; COGs: COG3590 metalloendopeptidase; InterPro IPR008753:IPR018497; KEGG: zpr:ZPR_4568 neutral endopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal; SPTR: Neutral endopeptidase; peptidase M13 1023325..1025391 Cyclobacterium marinum DSM 745 11037175 YP_004772874.1 CDS Cycma_0870 NC_015914.1 1025927 1026058 D hypothetical protein 1025927..1026058 Cyclobacterium marinum DSM 745 11037176 YP_004772875.1 CDS Cycma_0871 NC_015914.1 1026364 1026654 R PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: zpr:ZPR_1445 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: plasmid stabilization element ParE; plasmid stabilization system complement(1026364..1026654) Cyclobacterium marinum DSM 745 11037177 YP_004772876.1 CDS Cycma_0872 NC_015914.1 1026651 1026896 R PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: cpb:Cphamn1_1160 addiction module antidote protein, CopG/Arc/MetJ family; PFAM: addiction module antidote protein, CC2985; SPTR: addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: addiction module antidote protein, CC2985; addiction module antidote protein complement(1026651..1026896) Cyclobacterium marinum DSM 745 11037178 YP_004772877.1 CDS Cycma_0873 NC_015914.1 1027890 1027994 R hypothetical protein complement(1027890..1027994) Cyclobacterium marinum DSM 745 11037179 YP_004772878.1 CDS Cycma_0874 NC_015914.1 1028493 1029320 R KEGG: par:Psyc_1264 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1028493..1029320) Cyclobacterium marinum DSM 745 11037180 YP_004772879.1 CDS Cycma_0875 NC_015914.1 1029473 1030204 R hypothetical protein complement(1029473..1030204) Cyclobacterium marinum DSM 745 11037181 YP_004772880.1 CDS Cycma_0876 NC_015914.1 1030313 1030771 R hypothetical protein complement(1030313..1030771) Cyclobacterium marinum DSM 745 11037182 YP_004772881.1 CDS Cycma_0877 NC_015914.1 1031180 1031647 R PFAM: DinB family; KEGG: bae:BATR1942_00360 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1031180..1031647) Cyclobacterium marinum DSM 745 11037183 YP_004772882.1 CDS Cycma_0878 NC_015914.1 1031680 1035234 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR013655:IPR008207; KEGG: lbf:LBF_0692 two component response regulator sensor histidine kinase/response regulator subunits; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Signal transduction response regulator, receiver region; SPTR: two-component sensor protein; TIGRFAM: PAS; multi-sensor hybrid histidine kinase complement(1031680..1035234) Cyclobacterium marinum DSM 745 11037184 YP_004772883.1 CDS Cycma_0880 NC_015914.1 1037426 1037677 R PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: mtt:Ftrac_1428 addiction module antidote protein, cc2985 family; PFAM: addiction module antidote protein, CC2985; SPTR: addiction module antidote protein, CC2985 family; TIGRFAM: addiction module antidote protein, CC2985; addiction module antidote protein complement(1037426..1037677) Cyclobacterium marinum DSM 745 11037186 YP_004772884.1 CDS Cycma_0881 NC_015914.1 1038425 1038862 D hypothetical protein 1038425..1038862 Cyclobacterium marinum DSM 745 11037187 YP_004772885.1 CDS Cycma_0882 NC_015914.1 1038931 1039326 R hypothetical protein complement(1038931..1039326) Cyclobacterium marinum DSM 745 11037188 YP_004772886.1 CDS Cycma_0883 NC_015914.1 1039932 1041176 R PFAM: Serpin (serine protease inhibitor); COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: proteinase inhibitor I4 serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin; SPTR: Proteinase inhibitor I4 serpin; proteinase inhibitor I4 serpin complement(1039932..1041176) Cyclobacterium marinum DSM 745 11037189 YP_004772887.1 CDS Cycma_0884 NC_015914.1 1041481 1042635 R KEGG: pdi:BDI_3448 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1041481..1042635) Cyclobacterium marinum DSM 745 11037190 YP_004772888.1 CDS Cycma_0885 NC_015914.1 1042888 1044126 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR006311:IPR013341:IPR013342; KEGG: dfe:Dfer_1010 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; mandelate racemase 1042888..1044126 Cyclobacterium marinum DSM 745 11037191 YP_004772889.1 CDS Cycma_0886 NC_015914.1 1045186 1045356 R hypothetical protein complement(1045186..1045356) Cyclobacterium marinum DSM 745 11037192 YP_004772890.1 CDS Cycma_0887 NC_015914.1 1045839 1048970 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1006 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 1045839..1048970 Cyclobacterium marinum DSM 745 11037193 YP_004772891.1 CDS Cycma_0888 NC_015914.1 1048975 1050513 D KEGG: dfe:Dfer_1007 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1048975..1050513 Cyclobacterium marinum DSM 745 11037194 YP_004772892.1 CDS Cycma_0889 NC_015914.1 1050807 1052075 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: dfe:Dfer_1011 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; mandelate racemase 1050807..1052075 Cyclobacterium marinum DSM 745 11037195 YP_004772893.1 CDS Cycma_0890 NC_015914.1 1052132 1053478 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR006311:IPR013341:IPR013342; KEGG: sli:Slin_3948 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; mandelate racemase 1052132..1053478 Cyclobacterium marinum DSM 745 11037196 YP_004772894.1 CDS Cycma_0891 NC_015914.1 1053650 1054012 D PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; KEGG: ppn:Palpr_1213 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1053650..1054012 Cyclobacterium marinum DSM 745 11037197 YP_004772895.1 CDS Cycma_0892 NC_015914.1 1054161 1055669 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB2701 N-acetylgalactosamine 6-sulfate sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase (GALNS); sulfatase complement(1054161..1055669) Cyclobacterium marinum DSM 745 11037198 YP_004772896.1 CDS Cycma_0893 NC_015914.1 1055845 1056639 D PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: cly:Celly_2946 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A 2; TIGRFAM: Pseudouridine synthase I, TruA; tRNA pseudouridine synthase A 1055845..1056639 Cyclobacterium marinum DSM 745 11037199 YP_004772897.1 CDS Cycma_0894 NC_015914.1 1056826 1057347 D KEGG: mtt:Ftrac_3595 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1056826..1057347 Cyclobacterium marinum DSM 745 11037200 YP_004772898.1 CDS Cycma_0895 NC_015914.1 1057762 1058460 D SPTR: uncharacterized protein; hypothetical protein 1057762..1058460 Cyclobacterium marinum DSM 745 11037201 YP_004772899.1 CDS Cycma_0896 NC_015914.1 1058865 1060208 D PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; COGs: COG2814 Arabinose efflux permease; InterPro IPR003663:IPR005828; KEGG: mtt:Ftrac_1568 sugar transporter; PFAM: General substrate transporter; SPTR: Arabinose-proton symporter; TIGRFAM: Sugar/inositol transporter; sugar transporter 1058865..1060208 Cyclobacterium marinum DSM 745 11037202 YP_004772900.1 CDS Cycma_0897 NC_015914.1 1060201 1061082 D PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: cpi:Cpin_0562 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: Fructokinase; PfkB domain-containing protein 1060201..1061082 Cyclobacterium marinum DSM 745 11037203 YP_004772901.1 CDS Cycma_0898 NC_015914.1 1061355 1061939 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1061355..1061939) Cyclobacterium marinum DSM 745 11037204 YP_004772902.1 CDS Cycma_0899 NC_015914.1 1061983 1062237 D hypothetical protein 1061983..1062237 Cyclobacterium marinum DSM 745 11037205 YP_004772903.1 CDS Cycma_0900 NC_015914.1 1062285 1063355 R PFAM: Alanine racemase, N-terminal domain; COGs: COG3457 amino acid racemase; InterPro IPR001608; KEGG: mtt:Ftrac_3254 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: amino acid racemase; alanine racemase complement(1062285..1063355) Cyclobacterium marinum DSM 745 11037206 YP_004772904.1 CDS Cycma_0901 NC_015914.1 1063357 1063797 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: mtt:Ftrac_3253 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(1063357..1063797) Cyclobacterium marinum DSM 745 11037207 YP_004772905.1 CDS Cycma_0902 NC_015914.1 1063831 1065240 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: mtt:Ftrac_3252 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: sodium-solute symporter; Na+/solute symporter complement(1063831..1065240) Cyclobacterium marinum DSM 745 11037208 YP_004772906.1 CDS Cycma_0903 NC_015914.1 1065402 1066151 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR004489:IPR001450; KEGG: mtt:Ftrac_3251 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Fumarate reductase, iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(1065402..1066151) Cyclobacterium marinum DSM 745 11037209 YP_004772907.1 CDS Cycma_0904 NC_015914.1 1066181 1068115 R PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280:IPR003953:IPR004112; KEGG: mtt:Ftrac_3250 succinate dehydrogenase subunit A; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; SPTR: Fumarate reductase, flavoprotein subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; succinate dehydrogenase or fumarate reductase, flavoprotein subunit complement(1066181..1068115) Cyclobacterium marinum DSM 745 11037210 YP_004772908.1 CDS Cycma_0905 NC_015914.1 1068162 1068845 R TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; InterPro IPR011138; KEGG: mtt:Ftrac_3249 succinate dehydrogenase subunit C; SPTR: Succinate dehydrogenase subunit C; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family complement(1068162..1068845) Cyclobacterium marinum DSM 745 11037211 YP_004772909.1 CDS Cycma_0906 NC_015914.1 1068829 1068924 R hypothetical protein complement(1068829..1068924) Cyclobacterium marinum DSM 745 11037212 YP_004772910.1 CDS Cycma_0907 NC_015914.1 1069326 1072100 D KEGG: mtt:Ftrac_3248 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1069326..1072100 Cyclobacterium marinum DSM 745 11037213 YP_004772911.1 CDS Cycma_0908 NC_015914.1 1072278 1073156 D PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: mtt:Ftrac_3246 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; malonyl CoA-ACP transacylase 1072278..1073156 Cyclobacterium marinum DSM 745 11037214 YP_004772912.1 CDS Cycma_0909 NC_015914.1 1073341 1073829 R PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: chu:CHU_2468 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inediphosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1073341..1073829) Cyclobacterium marinum DSM 745 11037215 YP_004772913.1 CDS Cycma_0910 NC_015914.1 1073908 1075668 D PFAM: Peptidase S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004634:IPR004635:IPR002142; KEGG: mtt:Ftrac_1087 signal peptide peptidase SppA, 67k type; PFAM: Peptidase S49; SPTR: Signal peptide peptidase SppA, 67K type; TIGRFAM: Peptidase S49, protease IV; Peptidase S49, SppA; signal peptide peptidase SppA, 67K type 1073908..1075668 Cyclobacterium marinum DSM 745 11037216 YP_004772914.1 CDS Cycma_0911 NC_015914.1 1075681 1076577 D PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: sli:Slin_4762 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein 1075681..1076577 Cyclobacterium marinum DSM 745 11037217 YP_004772915.1 CDS Cycma_0912 NC_015914.1 1076701 1079328 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: mtt:Ftrac_0821 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase, class Ia; valyl-tRNA synthetase 1076701..1079328 Cyclobacterium marinum DSM 745 11037218 YP_004772916.1 CDS Cycma_0913 NC_015914.1 1079426 1079965 R PFAM: Inorganic pyrophosphatase; COGs: COG0221 Inorganic pyrophosphatase; HAMAP: Inorganic pyrophosphatase; InterPro IPR008162; KEGG: chu:CHU_3108 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; SPTR: Inorganic diphosphatase; inorganic pyrophosphatase complement(1079426..1079965) Cyclobacterium marinum DSM 745 11037219 YP_004772917.1 CDS Cycma_0914 NC_015914.1 1080160 1081248 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR001789:IPR003661:IPR003594; KEGG: cpi:Cpin_1315 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Two-component system response regulator; response regulator receiver sensor signal transduction histidine kinase complement(1080160..1081248) Cyclobacterium marinum DSM 745 11037220 YP_004772918.1 CDS Cycma_0915 NC_015914.1 1081252 1083390 R PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661:IPR003594:IPR011623; KEGG: dfe:Dfer_2391 diverse 7TM receptor transmembrane region; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, transmembrane region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Phosphoglycerate transport protein for signal transmission; integral membrane sensor signal transduction histidine kinase complement(1081252..1083390) Cyclobacterium marinum DSM 745 11037221 YP_004772919.1 CDS Cycma_0916 NC_015914.1 1083377 1084087 R KEGG: dfe:Dfer_2390 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1083377..1084087) Cyclobacterium marinum DSM 745 11037222 YP_004772920.1 CDS Cycma_0917 NC_015914.1 1084077 1085186 R PFAM: ThiF family; COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594; KEGG: chu:CHU_2794 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: UBA/THIF-type NAD/FAD binding fold protein; UBA/THIF-type NAD/FAD binding protein complement(1084077..1085186) Cyclobacterium marinum DSM 745 11037223 YP_004772921.1 CDS Cycma_0918 NC_015914.1 1085444 1085908 D PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: dfe:Dfer_2388 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Hydrogenase transcriptional regulatory protein HoxA; response regulator receiver protein 1085444..1085908 Cyclobacterium marinum DSM 745 11037224 YP_004772922.1 CDS Cycma_0919 NC_015914.1 1085924 1087144 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886:IPR007698; KEGG: mtt:Ftrac_3538 alanine dehydrogenase/pnt domain protein; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; SPTR: Alanine dehydrogenase; alanine dehydrogenase complement(1085924..1087144) Cyclobacterium marinum DSM 745 11037225 YP_004772923.1 CDS Cycma_0920 NC_015914.1 1087141 1087569 R PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: sli:Slin_2993 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: ATPase; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein complement(1087141..1087569) Cyclobacterium marinum DSM 745 11037226 YP_004772924.1 CDS Cycma_0921 NC_015914.1 1087577 1089130 R PFAM: PglZ domain; Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR013973; KEGG: sli:Slin_3042 response regulator receiver protein; PFAM: PglZ domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator; response regulator receiver protein complement(1087577..1089130) Cyclobacterium marinum DSM 745 11037227 YP_004772925.1 CDS Cycma_0922 NC_015914.1 1089183 1090424 D PFAM: HD domain; COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR003607:IPR006674; KEGG: mtt:Ftrac_3535 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HD domain protein; metal dependent phosphohydrolase 1089183..1090424 Cyclobacterium marinum DSM 745 11037228 YP_004772926.1 CDS Cycma_0923 NC_015914.1 1090440 1091459 D PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR020573:IPR001451; KEGG: mtt:Ftrac_3534 udp-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1090440..1091459 Cyclobacterium marinum DSM 745 11037229 YP_004772927.1 CDS Cycma_0924 NC_015914.1 1091512 1092906 D PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; UDP-3-O-acyl N-acetylglucosamine deacetylase; InterPro IPR004463:IPR010084:IPR013114; KEGG: chu:CHU_1037 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase; (3R)-hydroxymyristoyl-ACP dehydratase 1091512..1092906 Cyclobacterium marinum DSM 745 11037230 YP_004772928.1 CDS Cycma_0925 NC_015914.1 1092903 1093682 D PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451; KEGG: lby:Lbys_1661 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineo-acyltransferase; SPTR:Acyl-[acyl-carrier-protein]-UDP-N-acetylglucos amineO-acyltransferase; TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; acyl-ACP--UDP-N- acetylglucosamine O-acyltransferase 1092903..1093682 Cyclobacterium marinum DSM 745 11037231 YP_004772929.1 CDS Cycma_0926 NC_015914.1 1093685 1094311 D PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_2685 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter 1093685..1094311 Cyclobacterium marinum DSM 745 11037232 YP_004772930.1 CDS Cycma_0927 NC_015914.1 1094358 1094849 D SPTR: uncharacterized protein; hypothetical protein 1094358..1094849 Cyclobacterium marinum DSM 745 11037233 YP_004772931.1 CDS Cycma_0928 NC_015914.1 1094871 1095296 D KEGG: dfe:Dfer_2844 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1094871..1095296 Cyclobacterium marinum DSM 745 11037234 YP_004772932.1 CDS Cycma_0929 NC_015914.1 1095331 1097724 R PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; COGs: COG1193 Mismatch repair ATPase (MutS family); HAMAP: MutS2 protein; InterPro IPR007696:IPR000432:IPR002625; KEGG: sli:Slin_0268 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal; SPTR: MutS2 family protein; MutS2 protein complement(1095331..1097724) Cyclobacterium marinum DSM 745 11037235 YP_004772933.1 CDS Cycma_0930 NC_015914.1 1097725 1098075 R KEGG: chu:CHU_2652 hypothetical protein; SPTR: Lipoprotein; hypothetical protein complement(1097725..1098075) Cyclobacterium marinum DSM 745 11037236 YP_004772934.1 CDS Cycma_0931 NC_015914.1 1098182 1099060 D PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mtt:Ftrac_0403 hypothetical protein; PFAM: Protein of unknown function DUF58; SPTR: uncharacterized protein; hypothetical protein 1098182..1099060 Cyclobacterium marinum DSM 745 11037237 YP_004772935.1 CDS Cycma_0932 NC_015914.1 1099053 1099955 D KEGG: mtt:Ftrac_0402 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1099053..1099955 Cyclobacterium marinum DSM 745 11037238 YP_004772936.1 CDS Cycma_0933 NC_015914.1 1099948 1100988 D PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: mtt:Ftrac_0401 von willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatA protein; von Willebrand factor A 1099948..1100988 Cyclobacterium marinum DSM 745 11037239 YP_004772937.1 CDS Cycma_0934 NC_015914.1 1101158 1101376 R hypothetical protein complement(1101158..1101376) Cyclobacterium marinum DSM 745 11037240 YP_004772938.1 CDS Cycma_0935 NC_015914.1 1101361 1102782 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: rmr:Rmar_1740 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(1101361..1102782) Cyclobacterium marinum DSM 745 11037241 YP_004772939.1 CDS Cycma_0936 NC_015914.1 1102878 1103744 R PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: rca:Rcas_1499 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(1102878..1103744) Cyclobacterium marinum DSM 745 11037242 YP_004772940.1 CDS Cycma_0937 NC_015914.1 1103811 1105181 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; COGs: COG1350 alternative tryptophan synthase beta-subunit (paralog of TrpB); HAMAP: Tryptophan synthase beta chain; InterPro IPR006316:IPR001926; KEGG: Tryptophan synthase beta chain; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Tryptophan synthase beta chain 1; TIGRFAM: Tryptophan synthase, beta chain-like; tryptophan synthase subunit beta complement(1103811..1105181) Cyclobacterium marinum DSM 745 11037243 YP_004772941.1 CDS Cycma_0938 NC_015914.1 1105295 1108597 R PFAM: ASPIC and UnbV; InterPro IPR011519:IPR013517; KEGG: ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC and UnbV; ASPIC/UnbV domain-containing protein complement(1105295..1108597) Cyclobacterium marinum DSM 745 11037244 YP_004772942.1 CDS Cycma_0939 NC_015914.1 1108968 1110473 D PFAM: PQQ enzyme repeat; InterPro IPR002372; KEGG: fbc:FB2170_14288 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: uncharacterized protein; pyrrolo-quinoline quinone repeat-containing protein 1108968..1110473 Cyclobacterium marinum DSM 745 11037245 YP_004772943.1 CDS Cycma_0940 NC_015914.1 1110550 1112154 R KEGG: cly:Celly_2340 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1110550..1112154) Cyclobacterium marinum DSM 745 11037246 YP_004772944.1 CDS Cycma_0941 NC_015914.1 1112173 1115397 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cly:Celly_2339 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(1112173..1115397) Cyclobacterium marinum DSM 745 11037247 YP_004772945.1 CDS Cycma_0942 NC_015914.1 1115968 1116651 D PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: mtt:Ftrac_1199 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: Pyridoxal phosphate enzyme, YggS family; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; hypothetical protein 1115968..1116651 Cyclobacterium marinum DSM 745 11037248 YP_004772946.1 CDS Cycma_0943 NC_015914.1 1116657 1117031 D PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: mtt:Ftrac_1200 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: uncharacterized protein; hypothetical protein 1116657..1117031 Cyclobacterium marinum DSM 745 11037249 YP_004772947.1 CDS Cycma_0944 NC_015914.1 1117043 1118332 D PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: phe:Phep_4287 peptidase S13 D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; peptidase S13 D-Ala-D-Ala carboxypeptidase C 1117043..1118332 Cyclobacterium marinum DSM 745 11037250 YP_004772948.1 CDS Cycma_0945 NC_015914.1 1118341 1119393 D PFAM: LD-carboxypeptidase; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: psu:Psesu_1569 peptidase U61 LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: muramoyltetrapeptide carboxypeptidase; peptidase U61 1118341..1119393 Cyclobacterium marinum DSM 745 11037251 YP_004772949.1 CDS Cycma_0946 NC_015914.1 1119400 1120149 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: gfo:GFO_2395 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; SPTR: Lipoprotein; G-D-S-L family lipolytic protein 1119400..1120149 Cyclobacterium marinum DSM 745 11037252 YP_004772950.1 CDS Cycma_0947 NC_015914.1 1120296 1121144 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fjo:Fjoh_3356 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1120296..1121144) Cyclobacterium marinum DSM 745 11037253 YP_004772951.1 CDS Cycma_0948 NC_015914.1 1121462 1122217 D PFAM: YqcI/YcgG family; COGs: COG3403 conserved hypothetical protein; InterPro IPR014988; KEGG: gfo:GFO_1924 hypothetical protein; PFAM: Protein of unknown function, YqcI/YcgG; SPTR: uncharacterized protein; hypothetical protein 1121462..1122217 Cyclobacterium marinum DSM 745 11037254 YP_004772952.1 CDS Cycma_0949 NC_015914.1 1122293 1122880 D PFAM: Domain of unknown function (DUF1989); COGs: COG3665 conserved hypothetical protein; InterPro IPR018959; KEGG: gfo:GFO_0003 hypothetical protein; PFAM: Domain of unknown function DUF1989; SPTR: uncharacterized protein; hypothetical protein 1122293..1122880 Cyclobacterium marinum DSM 745 11037255 YP_004772953.1 CDS Cycma_0950 NC_015914.1 1122965 1123357 R PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: mtt:Ftrac_0888 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Lipoprotein; hypothetical protein complement(1122965..1123357) Cyclobacterium marinum DSM 745 11037256 YP_004772954.1 CDS Cycma_0951 NC_015914.1 1123401 1124828 R PFAM: Uncharacterized conserved protein (DUF2075); COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593; KEGG: mtt:Ftrac_0889 ATP-dependent exodnase (exonuclease v); SMART: ATPase, AAA+ type, core; SPTR: helicase; ATPase AAA complement(1123401..1124828) Cyclobacterium marinum DSM 745 11037257 YP_004772955.1 CDS Cycma_0952 NC_015914.1 1124845 1125354 D PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: sli:Slin_1463 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; NUDIX hydrolase 1124845..1125354 Cyclobacterium marinum DSM 745 11037258 YP_004772956.1 CDS Cycma_0953 NC_015914.1 1125416 1125997 D KEGG: mtt:Ftrac_0892 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1125416..1125997 Cyclobacterium marinum DSM 745 11037259 YP_004772957.1 CDS Cycma_0954 NC_015914.1 1126054 1126848 D KEGG: fbc:FB2170_15188 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1126054..1126848 Cyclobacterium marinum DSM 745 11037260 YP_004772958.1 CDS Cycma_0955 NC_015914.1 1126845 1127300 D PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004821:IPR001980:IPR004820; KEGG: mtt:Ftrac_0894 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; phosphopantetheine adenylyltransferase 1126845..1127300 Cyclobacterium marinum DSM 745 11037261 YP_004772959.1 CDS Cycma_0956 NC_015914.1 1127288 1127977 R PFAM: NUDIX domain; InterPro IPR000086; KEGG: mtt:Ftrac_3481 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: hydrolase, NUDIX family; NUDIX hydrolase complement(1127288..1127977) Cyclobacterium marinum DSM 745 11037262 YP_004772960.1 CDS Cycma_0957 NC_015914.1 1128061 1128705 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; COGs: COG0461 Orotate phosphoribosyltransferase; HAMAP: Orotate phosphoribosyltransferase; InterPro IPR004467:IPR000836; KEGG: mtt:Ftrac_1363 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; orotate phosphoribosyltransferase 1128061..1128705 Cyclobacterium marinum DSM 745 11037263 YP_004772961.1 CDS Cycma_0958 NC_015914.1 1128808 1129593 R PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; InterPro IPR014127; KEGG: mtt:Ftrac_3217 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; hypothetical protein complement(1128808..1129593) Cyclobacterium marinum DSM 745 11037264 YP_004772962.1 CDS Cycma_0959 NC_015914.1 1129586 1130146 R SPTR: uncharacterized protein; hypothetical protein complement(1129586..1130146) Cyclobacterium marinum DSM 745 11037265 YP_004772963.1 CDS Cycma_0960 NC_015914.1 1130295 1131875 D PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR004548:IPR005225:IPR000795; KEGG: mtt:Ftrac_2846 bacterial peptide chain release factor 3 (brf-3); PFAM: Protein synthesis factor, GTP-binding; SPTR: Peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; peptide chain release factor 3 1130295..1131875 Cyclobacterium marinum DSM 745 11037266 YP_004772964.1 CDS Cycma_0961 NC_015914.1 1131897 1132628 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: dfe:Dfer_3776 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase; pseudouridine synthase 1131897..1132628 Cyclobacterium marinum DSM 745 11037267 YP_004772965.1 CDS Cycma_0962 NC_015914.1 1132641 1133495 D PFAM: GumN protein; COGs: COG3735 conserved hypothetical protein; InterPro IPR010891; KEGG: sli:Slin_6313 GumN family protein; PFAM: GumN; SPTR: GumN family protein; GumN family protein 1132641..1133495 Cyclobacterium marinum DSM 745 11037268 YP_004772966.1 CDS Cycma_0963 NC_015914.1 1133498 1134211 R PFAM: SNARE associated Golgi protein; InterPro IPR015414; KEGG: lby:Lbys_2900 SNARE associated golgi proteiN-like protein; PFAM: SNARE associated Golgi protein; SPTR: uncharacterized protein; hypothetical protein complement(1133498..1134211) Cyclobacterium marinum DSM 745 11037269 YP_004772967.1 CDS Cycma_0964 NC_015914.1 1134314 1135459 D PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: mtt:Ftrac_3758 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine beta-lyase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 1134314..1135459 Cyclobacterium marinum DSM 745 11037270 YP_004772968.1 CDS Cycma_0965 NC_015914.1 1135456 1136292 R SPTR: uncharacterized protein; hypothetical protein complement(1135456..1136292) Cyclobacterium marinum DSM 745 11037271 YP_004772969.1 CDS Cycma_0966 NC_015914.1 1136295 1137257 R PFAM: Smr domain; InterPro IPR002625; KEGG: dfe:Dfer_2585 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SPTR: Smr domain protein; Smr protein/MutS2 complement(1136295..1137257) Cyclobacterium marinum DSM 745 11037272 YP_004772970.1 CDS Cycma_0967 NC_015914.1 1137561 1140335 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR002300:IPR013155; KEGG: mtt:Ftrac_1194 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class Ia; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; leucyl-tRNA synthetase complement(1137561..1140335) Cyclobacterium marinum DSM 745 11037273 YP_004772971.1 CDS Cycma_0968 NC_015914.1 1140462 1141406 R KEGG: chu:CHU_0917 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1140462..1141406) Cyclobacterium marinum DSM 745 11037274 YP_004772972.1 CDS Cycma_0969 NC_015914.1 1141489 1142394 R PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0701 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS complement(1141489..1142394) Cyclobacterium marinum DSM 745 11037275 YP_004772973.1 CDS Cycma_0970 NC_015914.1 1142564 1144108 D PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR000182:IPR003010; KEGG: chu:CHU_2523 carbon-nitrogen hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; SPTR: Hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1142564..1144108 Cyclobacterium marinum DSM 745 11037276 YP_004772974.1 CDS Cycma_0971 NC_015914.1 1144105 1144650 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549:IPR005834; KEGG: tcx:Tcr_0976 phosphatase KdsC; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: 3-deoxy-manno-octulosonate-8-phosphatase; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1144105..1144650 Cyclobacterium marinum DSM 745 11037277 YP_004772975.1 CDS Cycma_0972 NC_015914.1 1144672 1145520 D PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; InterPro IPR006269:IPR006218; KEGG: hya:HY04AAS1_1603 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 1144672..1145520 Cyclobacterium marinum DSM 745 11037278 YP_004772976.1 CDS Cycma_0973 NC_015914.1 1145517 1147187 D PFAM: peptidoglycan binding domain; L,D-transpeptidase catalytic domain; COGs: COG2989 conserved hypothetical protein; InterPro IPR002477:IPR005490; KEGG: cli:Clim_2069 peptidoglycan-binding domain 1 protein; PFAM: YkuD domain; Peptidoglycan binding-like; SPTR: peptidoglycan binding protein; ErfK/YbiS/YcfS/YnhG family protein 1145517..1147187 Cyclobacterium marinum DSM 745 11037279 YP_004772977.1 CDS Cycma_0974 NC_015914.1 1147205 1147933 R KEGG: paa:Paes_1896 hypothetical protein; SPTR: secreted protein; hypothetical protein complement(1147205..1147933) Cyclobacterium marinum DSM 745 11037280 YP_004772978.1 CDS Cycma_0975 NC_015914.1 1147977 1148111 R hypothetical protein complement(1147977..1148111) Cyclobacterium marinum DSM 745 11037281 YP_004772979.1 CDS Cycma_0976 NC_015914.1 1148425 1148835 D PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: dfe:Dfer_0467 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl tetrahydrobiopterin synthase; hypothetical protein 1148425..1148835 Cyclobacterium marinum DSM 745 11037282 YP_004772980.1 CDS Cycma_0977 NC_015914.1 1148795 1149496 D PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: mtt:Ftrac_0670 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 1148795..1149496 Cyclobacterium marinum DSM 745 11037283 YP_004772981.1 CDS Cycma_0978 NC_015914.1 1149645 1150325 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_1007 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1149645..1150325 Cyclobacterium marinum DSM 745 11037284 YP_004772982.1 CDS Cycma_0979 NC_015914.1 1150395 1150658 D KEGG: mtt:Ftrac_0674 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1150395..1150658 Cyclobacterium marinum DSM 745 11037285 YP_004772983.1 CDS Cycma_0980 NC_015914.1 1150707 1151156 D KEGG: mtt:Ftrac_0672 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1150707..1151156 Cyclobacterium marinum DSM 745 11037286 YP_004772984.1 CDS Cycma_0981 NC_015914.1 1151156 1151779 D PFAM: Flavin reductase like domain; KEGG: fps:FP2040 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1151156..1151779 Cyclobacterium marinum DSM 745 11037287 YP_004772985.1 CDS Cycma_0982 NC_015914.1 1151964 1153424 R PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254; KEGG: mtt:Ftrac_3090 HtrA2 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: HtrA protein; peptidase S1 and S6 chymotrypsin/Hap complement(1151964..1153424) Cyclobacterium marinum DSM 745 11037288 YP_004772986.1 CDS Cycma_0983 NC_015914.1 1153678 1154841 D PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR013512:IPR013644; KEGG: mtt:Ftrac_2872 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1153678..1154841 Cyclobacterium marinum DSM 745 11037289 YP_004772987.1 CDS Cycma_0984 NC_015914.1 1154845 1156164 D PFAM: Peptidase M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387:IPR001478:IPR008915; KEGG: mtt:Ftrac_2871 site-2 protease; PFAM: Peptidase M50; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: RIP metalloprotease RseP; TIGRFAM: Peptidase M50, membrane-associated zinc metallopeptidase; zinc metalloprotease 1154845..1156164 Cyclobacterium marinum DSM 745 11037290 YP_004772988.1 CDS Cycma_0985 NC_015914.1 1156359 1158845 D PFAM: ATP-dependent protease La (LON) domain; ATPase associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269; KEGG: mtt:Ftrac_0807 ATP-dependent protease la; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; anti-sigma H sporulation factor LonB 1156359..1158845 Cyclobacterium marinum DSM 745 11037291 YP_004772989.1 CDS Cycma_0986 NC_015914.1 1158858 1160237 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; InterPro IPR004491:IPR003593:IPR013093:IPR019489; KEGG: mtt:Ftrac_0809 heat shock protein hslvu, atpase subunit HslU; PFAM: ATPase associated with various cellular activities, AAA-2; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: Heat shock protein HslU; ATP-dependent protease ATP-binding subunit HslU 1158858..1160237 Cyclobacterium marinum DSM 745 11037292 YP_004772990.1 CDS Cycma_0987 NC_015914.1 1160265 1162394 R PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274:IPR000674; KEGG: aba:Acid345_1932 isoquinoline 1-oxidoreductase; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SPTR: Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase complement(1160265..1162394) Cyclobacterium marinum DSM 745 11037293 YP_004772991.1 CDS Cycma_0988 NC_015914.1 1162400 1162951 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: aba:Acid345_1931 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding protein; (2Fe-2S)-binding protein complement(1162400..1162951) Cyclobacterium marinum DSM 745 11037294 YP_004772992.1 CDS Cycma_0989 NC_015914.1 1163111 1164154 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: mtt:Ftrac_3199 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 1; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); 3-oxoacyl-ACP synthase 1163111..1164154 Cyclobacterium marinum DSM 745 11037295 YP_004772993.1 CDS Cycma_0990 NC_015914.1 1164172 1164735 D PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR011768:IPR013185:IPR001059:IPR015365; KEGG: mtt:Ftrac_3200 translation elongation factor p (ef-p); PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P; elongation factor P 1164172..1164735 Cyclobacterium marinum DSM 745 11037296 YP_004772994.1 CDS Cycma_0991 NC_015914.1 1164800 1165309 D PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR000089; KEGG: mtt:Ftrac_3201 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1164800..1165309 Cyclobacterium marinum DSM 745 11037297 YP_004772995.1 CDS Cycma_0992 NC_015914.1 1165339 1166691 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR004549:IPR005481:IPR005479:IPR005482; KEGG: mtt:Ftrac_3202 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase subunit; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; manually curated; acetyl-CoA carboxylase, biotin carboxylase 1165339..1166691 Cyclobacterium marinum DSM 745 11037298 YP_004772996.1 CDS Cycma_0993 NC_015914.1 1166898 1167017 R hypothetical protein complement(1166898..1167017) Cyclobacterium marinum DSM 745 11037299 YP_004772997.1 CDS Cycma_0994 NC_015914.1 1167024 1169339 D PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_1595 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: Xanthan lyase; hypothetical protein 1167024..1169339 Cyclobacterium marinum DSM 745 11037300 YP_004772998.1 CDS Cycma_0995 NC_015914.1 1169341 1170798 D PFAM: Protein of unknown function (DUF1501); InterPro IPR010869; KEGG: dfe:Dfer_1594 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: Twin-arginine translocation pathway signal; hypothetical protein 1169341..1170798 Cyclobacterium marinum DSM 745 11037301 YP_004772999.1 CDS Cycma_0996 NC_015914.1 1170837 1172978 D PFAM: Planctomycete cytochrome C; InterPro IPR011429:IPR001611; KEGG: dfe:Dfer_1976 planctomycete cytochrome c; PFAM: Cytochrome C, Planctomycete; Leucine-rich repeat; SPTR: uncharacterized protein; cytochrome C 1170837..1172978 Cyclobacterium marinum DSM 745 11037302 YP_004773000.1 CDS Cycma_0997 NC_015914.1 1173013 1174117 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated; peptide chain release factor 2 complement(join(1173013..1174056,1174058..1174117)) Cyclobacterium marinum DSM 745 11037303 YP_004773001.1 CDS Cycma_0998 NC_015914.1 1174272 1174787 R SPTR: uncharacterized protein; hypothetical protein complement(1174272..1174787) Cyclobacterium marinum DSM 745 11037304 YP_004773002.1 CDS Cycma_0999 NC_015914.1 1174830 1175897 R PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: mtt:Ftrac_0939 branched chain amino acid aminotransferase apoenzyme; PFAM: Aminotransferase, class IV; SPTR: Branched-chain-amino-acid transaminase; TIGRFAM: Branched-chain amino acid aminotransferase II; branched-chain amino acid aminotransferase complement(1174830..1175897) Cyclobacterium marinum DSM 745 11037305 YP_004773003.1 CDS Cycma_1000 NC_015914.1 1175904 1176452 R PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779; KEGG: ATP/cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; SPTR: ATP:corrinoid adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; ATP/cobalamin adenosyltransferase complement(1175904..1176452) Cyclobacterium marinum DSM 745 11037306 YP_004773004.1 CDS Cycma_1001 NC_015914.1 1176474 1177190 R PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_3760 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: macrolide efflux ABC transporter, ATP-binding protein; ABC transporter complement(1176474..1177190) Cyclobacterium marinum DSM 745 11037307 YP_004773005.1 CDS Cycma_1002 NC_015914.1 1177269 1180037 R KEGG: mtt:Ftrac_3469 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1177269..1180037) Cyclobacterium marinum DSM 745 11037308 YP_004773006.1 CDS Cycma_1003 NC_015914.1 1180037 1180324 R PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; InterPro IPR003837; KEGG: mtt:Ftrac_3468 aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase, C subunit; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1180037..1180324) Cyclobacterium marinum DSM 745 11037309 YP_004773007.1 CDS Cycma_1004 NC_015914.1 1180342 1181076 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mtt:Ftrac_3467 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase complement(1180342..1181076) Cyclobacterium marinum DSM 745 11037310 YP_004773008.1 CDS Cycma_1005 NC_015914.1 1181168 1182535 R PFAM: Peptidase S49; NfeD-like; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002142:IPR002810; KEGG: mtt:Ftrac_3215 hypothetical protein; PFAM: Nodulation efficiency, NfeD; Peptidase S49; SPTR: Serine protease, ClpP class; hypothetical protein complement(1181168..1182535) Cyclobacterium marinum DSM 745 11037311 YP_004773009.1 CDS Cycma_1006 NC_015914.1 1182643 1183866 D PFAM: LysM domain; InterPro IPR002482:IPR018392; KEGG: mtt:Ftrac_3216 peptidoglycan-binding lysin domain; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein 1182643..1183866 Cyclobacterium marinum DSM 745 11037312 YP_004773010.1 CDS Cycma_1007 NC_015914.1 1184042 1185061 D PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: mtt:Ftrac_3196 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1184042..1185061 Cyclobacterium marinum DSM 745 11037313 YP_004773011.1 CDS Cycma_1008 NC_015914.1 1185131 1185682 D PFAM: Uncharacterized ACR, COG1399; InterPro IPR003772; KEGG: mtt:Ftrac_3197 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: uncharacterized protein; hypothetical protein 1185131..1185682 Cyclobacterium marinum DSM 745 11037314 YP_004773012.1 CDS Cycma_1009 NC_015914.1 1185701 1185892 D PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; COGs: COG0333 Ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: mtt:Ftrac_3198 LSU ribosomal protein l32p; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; 50S ribosomal protein L32 1185701..1185892 Cyclobacterium marinum DSM 745 11037315 YP_004773013.1 CDS Cycma_1010 NC_015914.1 1185950 1187533 R KEGG: bpi:BPLAN_568 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1185950..1187533) Cyclobacterium marinum DSM 745 11037316 YP_004773014.1 CDS Cycma_1011 NC_015914.1 1187673 1188824 D PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: cao:Celal_3379 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; SPTR: 2-isopropylmalate synthase; pyruvate carboxyltransferase 1187673..1188824 Cyclobacterium marinum DSM 745 11037317 YP_004773015.1 CDS Cycma_1012 NC_015914.1 1188985 1190238 D COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_04535 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; amidohydrolase 1188985..1190238 Cyclobacterium marinum DSM 745 11037318 YP_004773016.1 CDS Cycma_1013 NC_015914.1 1190251 1191279 D PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase 1190251..1191279 Cyclobacterium marinum DSM 745 11037319 YP_004773017.1 CDS Cycma_1014 NC_015914.1 1191312 1191686 R PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006504:IPR006660; KEGG: mmw:Mmwyl1_1267 arsenate reductase-like protein; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; TIGRFAM: Conserved hypothetical protein, ArsC related; ArsC family protein complement(1191312..1191686) Cyclobacterium marinum DSM 745 11037320 YP_004773018.1 CDS Cycma_1015 NC_015914.1 1192201 1195308 D InterPro IPR019734; KEGG: dfe:Dfer_1713 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; hypothetical protein 1192201..1195308 Cyclobacterium marinum DSM 745 11037321 YP_004773019.1 CDS Cycma_1016 NC_015914.1 1195393 1196679 R PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; InterPro IPR004639:IPR005814; KEGG: dfe:Dfer_1148 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde 2,1-aminomutase complement(1195393..1196679) Cyclobacterium marinum DSM 745 11037322 YP_004773020.1 CDS Cycma_1017 NC_015914.1 1196686 1198302 R PFAM: Receptor family ligand binding region; InterPro IPR001828; KEGG: chu:CHU_0935 hypothetical protein; PFAM: Extracellular ligand-binding receptor; SPTR: uncharacterized protein; ABC transporter substrate-binding protein complement(1196686..1198302) Cyclobacterium marinum DSM 745 11037323 YP_004773021.1 CDS Cycma_1018 NC_015914.1 1198495 1200024 R PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase [glutamine-hydrolyzing]; InterPro IPR004739:IPR001674:IPR000991:IPR018318; KEGG: chu:CHU_0934 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; GMP synthase complement(1198495..1200024) Cyclobacterium marinum DSM 745 11037324 YP_004773022.1 CDS Cycma_1019 NC_015914.1 1200583 1201578 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 1200583..1201578 Cyclobacterium marinum DSM 745 11037325 YP_004773023.1 CDS Cycma_1020 NC_015914.1 1202551 1202955 R PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: mtt:Ftrac_3190 histidine triad (hit) protein; PFAM: Histidine triad (HIT) protein; SPTR: HIT family protein; histidine triad (HIT) protein complement(1202551..1202955) Cyclobacterium marinum DSM 745 11037326 YP_004773024.1 CDS Cycma_1021 NC_015914.1 1203019 1203492 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR006359:IPR001437; KEGG: dfe:Dfer_4815 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: Transcription elongation factor greA 2; TIGRFAM: Prokaryotic transcription elongation factor GreA; transcription elongation factor GreA complement(1203019..1203492) Cyclobacterium marinum DSM 745 11037327 YP_004773025.1 CDS Cycma_1022 NC_015914.1 1203440 1203565 R hypothetical protein complement(1203440..1203565) Cyclobacterium marinum DSM 745 11037328 YP_004773026.1 CDS Cycma_1023 NC_015914.1 1203633 1204565 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: mtt:Ftrac_3193 D-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: Phosphoglycerate dehydrogenase; manually curated; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1203633..1204565) Cyclobacterium marinum DSM 745 11037329 YP_004773027.1 CDS Cycma_1024 NC_015914.1 1204573 1205940 R PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006669:IPR000644:IPR006668:IPR006667; KEGG: mtt:Ftrac_3194 magnesium transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; SPTR: Magnesium transporter; TIGRFAM: Divalent cation transporter; magnesium transporter complement(1204573..1205940) Cyclobacterium marinum DSM 745 11037330 YP_004773028.1 CDS Cycma_1025 NC_015914.1 1205928 1206710 R PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR011530:IPR020598:IPR001737; KEGG: mtt:Ftrac_3195 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Dimethyladenosine transferase; TIGRFAM: Ribosomal RNA adenine dimethylase; ribosomal RNA small subunit methyltransferase A complement(1205928..1206710) Cyclobacterium marinum DSM 745 11037331 YP_004773029.1 CDS Cycma_1026 NC_015914.1 1206945 1207463 R PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; COGs: COG0797 Lipoprotein; InterPro IPR012997:IPR005132; KEGG: cli:Clim_2366 rare lipoprotein A; PFAM: Rare lipoprotein A; SPTR: Rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; rare lipoprotein A complement(1206945..1207463) Cyclobacterium marinum DSM 745 11037332 YP_004773030.1 CDS Cycma_1027 NC_015914.1 1207856 1209136 D PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD; COGs: COG0420 DNA repair exonuclease; InterPro IPR004593:IPR004843; KEGG: psn:Pedsa_0559 nuclease SbcCD, D subunit; PFAM: Metallophosphoesterase; SPTR: DNA repair exonuclease; TIGRFAM: Exonuclease SbcD; nuclease SbcCD subunit D 1207856..1209136 Cyclobacterium marinum DSM 745 11037333 YP_004773031.1 CDS Cycma_1028 NC_015914.1 1209133 1212171 D TIGRFAM: exonuclease SbcC; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: dfe:Dfer_3418 SMC domain protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: RecF/RecN/SMC N domain protein; SMC domain-containing protein 1209133..1212171 Cyclobacterium marinum DSM 745 11037334 YP_004773032.1 CDS Cycma_1029 NC_015914.1 1212229 1213431 R PFAM: Glycosyl hydrolase 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: osp:Odosp_0295 alpha-amylase; PFAM: Glycoside hydrolase, family 57, core; SPTR: alpha-amylase; glycoside hydrolase complement(1212229..1213431) Cyclobacterium marinum DSM 745 11037335 YP_004773033.1 CDS Cycma_1030 NC_015914.1 1213435 1214715 R PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR013534:IPR001296; KEGG: osp:Odosp_0294 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; Starch synthase catalytic region; SPTR: Glycosyl transferase, group 1 family; group 1 glycosyl transferase complement(1213435..1214715) Cyclobacterium marinum DSM 745 11037336 YP_004773034.1 CDS Cycma_1031 NC_015914.1 1214727 1216643 R PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, COGs: COG3408 Glycogen debranching protein; InterPro IPR006451:IPR010401; KEGG: osp:Odosp_0293 glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; SPTR: Glycogen debranching enzyme-related protein; TIGRFAM: Glycogen debranching enzyme, archaeal type; glycogen debranching protein complement(1214727..1216643) Cyclobacterium marinum DSM 745 11037337 YP_004773035.1 CDS Cycma_1032 NC_015914.1 1216814 1216948 R hypothetical protein complement(1216814..1216948) Cyclobacterium marinum DSM 745 11037338 YP_004773036.1 CDS Cycma_1033 NC_015914.1 1217361 1218704 R PFAM: Amidohydrolase; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: psn:Pedsa_1710 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; amidohydrolase complement(1217361..1218704) Cyclobacterium marinum DSM 745 11037340 YP_004773037.1 CDS Cycma_1034 NC_015914.1 1218774 1220129 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: sli:Slin_5691 DEAD/DEAH box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase; DEAD/DEAH box helicase 1218774..1220129 Cyclobacterium marinum DSM 745 11037341 YP_004773038.1 CDS Cycma_1035 NC_015914.1 1220180 1221037 R PFAM: esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: cly:Celly_2190 esterase; PFAM: esterase; SPTR: Esterase; esterase complement(1220180..1221037) Cyclobacterium marinum DSM 745 11037342 YP_004773039.1 CDS Cycma_1036 NC_015914.1 1221219 1222175 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: sus:Acid_7006 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: uncharacterized protein; xylose isomerase domain-containing protein 1221219..1222175 Cyclobacterium marinum DSM 745 11037343 YP_004773040.1 CDS Cycma_1037 NC_015914.1 1222267 1222722 R KEGG: fjo:Fjoh_0739 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1222267..1222722) Cyclobacterium marinum DSM 745 11037344 YP_004773041.1 CDS Cycma_1038 NC_015914.1 1222861 1223448 R KEGG: dfe:Dfer_3061 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1222861..1223448) Cyclobacterium marinum DSM 745 11037345 YP_004773042.1 CDS Cycma_1039 NC_015914.1 1223616 1225115 R PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: mtt:Ftrac_1998 peptidase M28; PFAM: Peptidase M28; SPTR: peptidase M28; peptidase M28 complement(1223616..1225115) Cyclobacterium marinum DSM 745 11037346 YP_004773043.1 CDS Cycma_1040 NC_015914.1 1225255 1228173 D PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P-protein; InterPro IPR003437:IPR020580; KEGG: mtt:Ftrac_1997 glycine dehydrogenase (decarboxylating) beta subunit; glycine dehydrogenase (decarboxylating) alpha subunit; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating]; TIGRFAM: Glycine cleavage system P-protein; glycine dehydrogenase 1225255..1228173 Cyclobacterium marinum DSM 745 11037347 YP_004773044.1 CDS Cycma_1041 NC_015914.1 1228360 1229760 R PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II; COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase class II; InterPro IPR005677:IPR000362:IPR018951; KEGG: psn:Pedsa_3291 fumarase; PFAM: Fumarate lyase; Fumarase C, C-terminal; SPTR: Fumarate hydratase, class II; TIGRFAM: Fumarate hydratase, class II; fumarate hydratase class II complement(1228360..1229760) Cyclobacterium marinum DSM 745 11037348 YP_004773045.1 CDS Cycma_1042 NC_015914.1 1229883 1230365 R KEGG: mtt:Ftrac_2233 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1229883..1230365) Cyclobacterium marinum DSM 745 11037349 YP_004773046.1 CDS Cycma_1043 NC_015914.1 1230394 1230774 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: mtt:Ftrac_2234 endoribonuclease L-psp; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; endoribonuclease L-PSP complement(1230394..1230774) Cyclobacterium marinum DSM 745 11037350 YP_004773047.1 CDS Cycma_1044 NC_015914.1 1230851 1231540 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: dfe:Dfer_3651 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator RprY; winged helix family two component transcriptional regulator complement(1230851..1231540) Cyclobacterium marinum DSM 745 11037351 YP_004773048.1 CDS Cycma_1045 NC_015914.1 1231537 1233252 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_4094 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Sensor protein RprX; integral membrane sensor signal transduction histidine kinase complement(1231537..1233252) Cyclobacterium marinum DSM 745 11037352 YP_004773049.1 CDS Cycma_1046 NC_015914.1 1233449 1234681 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986:IPR000183; KEGG: mtt:Ftrac_2161 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase; diaminopimelate decarboxylase 1233449..1234681 Cyclobacterium marinum DSM 745 11037353 YP_004773050.1 CDS Cycma_1047 NC_015914.1 1235048 1235287 D hypothetical protein 1235048..1235287 Cyclobacterium marinum DSM 745 11037354 YP_004773051.1 CDS Cycma_1048 NC_015914.1 1235743 1235862 D hypothetical protein 1235743..1235862 Cyclobacterium marinum DSM 745 11037355 YP_004773052.1 CDS Cycma_1049 NC_015914.1 1235879 1236466 R TIGRFAM: siroheme synthase, N-terminal domain; COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: gfo:GFO_0329 siroheme synthase; SPTR: Siroheme synthase; TIGRFAM: Sirohaem synthase, N-terminal; siroheme synthase complement(1235879..1236466) Cyclobacterium marinum DSM 745 11037356 YP_004773053.1 CDS Cycma_1050 NC_015914.1 1236473 1237249 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: fjo:Fjoh_1505 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrinogen-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; uroporphyrin-III C-methyltransferase complement(1236473..1237249) Cyclobacterium marinum DSM 745 11037357 YP_004773054.1 CDS Cycma_1051 NC_015914.1 1237246 1239348 R PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117:IPR006067; KEGG: gfo:GFO_0327 ferredoxin-sulfite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; SPTR: Sulfite reductase (NADPH); nitrite and sulfite reductase 4Fe-4S region complement(1237246..1239348) Cyclobacterium marinum DSM 745 11037358 YP_004773055.1 CDS Cycma_1052 NC_015914.1 1239386 1240111 R PFAM: Phosphoadenosine phosphosulfate reductase; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR004511:IPR011798:IPR002500; KEGG: fjo:Fjoh_1501 adenylylsulfate reductase, thioredoxin dependent; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: ATP synthase F0, A subunit; TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type; adenylylsulfate reductase complement(1239386..1240111) Cyclobacterium marinum DSM 745 11037359 YP_004773056.1 CDS Cycma_1053 NC_015914.1 1240241 1240657 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cpi:Cpin_2027 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2; BadM/Rrf2 family transcriptional regulator complement(1240241..1240657) Cyclobacterium marinum DSM 745 11037360 YP_004773057.1 CDS Cycma_1054 NC_015914.1 1240896 1242779 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594:IPR020576; KEGG: phe:Phep_0051 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SPTR: Heat shock protein HtpG; Heat shock protein Hsp90 complement(1240896..1242779) Cyclobacterium marinum DSM 745 11037361 YP_004773058.1 CDS Cycma_1055 NC_015914.1 1242986 1245406 D InterPro IPR005195; KEGG: hut:Huta_2700 alpha/beta hydrolase domain-containing protein; PFAM: Glycoside hydrolase 65, central catalytic; SPTR: Alpha/beta hydrolase domain-containing protein; glycoside hydrolase 1242986..1245406 Cyclobacterium marinum DSM 745 11037362 YP_004773059.1 CDS Cycma_1056 NC_015914.1 1246288 1246665 D PFAM: SnoaL-like polyketide cyclase; COGs: COG4922 conserved hypothetical protein; InterPro IPR009959; KEGG: cao:Celal_1891 hypothetical protein; PFAM: Protein of unknown function DUF1486; SPTR: SnoaL-like polyketide cyclase; hypothetical protein 1246288..1246665 Cyclobacterium marinum DSM 745 11037363 YP_004773060.1 CDS Cycma_1057 NC_015914.1 1246996 1248636 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro IPR002591; KEGG: mtt:Ftrac_3067 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: alkaline phosphatase, probable; type I phosphodiesterase/nucleotide pyrophosphatase complement(1246996..1248636) Cyclobacterium marinum DSM 745 11037364 YP_004773061.1 CDS Cycma_1058 NC_015914.1 1248758 1249402 R KEGG: chu:CHU_0707 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1248758..1249402) Cyclobacterium marinum DSM 745 11037365 YP_004773062.1 CDS Cycma_1059 NC_015914.1 1249550 1249933 D PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mtt:Ftrac_1840 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Arsenical resistance operon repressor; regulatory protein ArsR 1249550..1249933 Cyclobacterium marinum DSM 745 11037366 YP_004773063.1 CDS Cycma_1060 NC_015914.1 1249940 1250635 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR011951:IPR006439:IPR005834; KEGG: mtt:Ftrac_1841 had superfamily (subfamily ia) hydrolase, tigr02254; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily hydrolase 1249940..1250635 Cyclobacterium marinum DSM 745 11037367 YP_004773064.1 CDS Cycma_1061 NC_015914.1 1250783 1252420 D PFAM: Aldehyde dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: mtt:Ftrac_3126 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; delta-1-pyrroline-5-carboxylate dehydrogenase 1250783..1252420 Cyclobacterium marinum DSM 745 11037368 YP_004773065.1 CDS Cycma_1062 NC_015914.1 1252469 1253980 R PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; COGs: COG1621 Beta-fructosidase (levanase/invertase); InterPro IPR001362:IPR013148:IPR013189; KEGG: Fructan beta-fructosidase; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase 32, C-terminal; SMART: Glycoside hydrolase, family 32; SPTR: Levanase; glycosyl hydrolase domain-containing protein complement(1252469..1253980) Cyclobacterium marinum DSM 745 11037369 YP_004773066.1 CDS Cycma_1063 NC_015914.1 1253995 1255203 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: mtt:Ftrac_2651 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1253995..1255203) Cyclobacterium marinum DSM 745 11037370 YP_004773067.1 CDS Cycma_1064 NC_015914.1 1255334 1256644 R COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: mtt:Ftrac_2425 ABC transporter permease; SPTR: ABC transporter, permease; ABC transporter permease complement(1255334..1256644) Cyclobacterium marinum DSM 745 11037371 YP_004773068.1 CDS Cycma_1065 NC_015914.1 1256634 1257536 R PFAM: ABC transporter; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fjo:Fjoh_5049 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter complement(1256634..1257536) Cyclobacterium marinum DSM 745 11037372 YP_004773069.1 CDS Cycma_1066 NC_015914.1 1257604 1258491 R KEGG: mtt:Ftrac_1942 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1257604..1258491) Cyclobacterium marinum DSM 745 11037373 YP_004773070.1 CDS Cycma_1067 NC_015914.1 1258561 1259673 R PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone protein dnaJ; InterPro IPR012724:IPR001623:IPR001305:IPR002939; KEGG: mtt:Ftrac_1941 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein DnaJ; TIGRFAM: Chaperone DnaJ; molecular chaperone DnaJ complement(1258561..1259673) Cyclobacterium marinum DSM 745 11037374 YP_004773071.1 CDS Cycma_1068 NC_015914.1 1259680 1260246 R PFAM: GrpE; COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: dfe:Dfer_4974 GrpE protein; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; protein grpE complement(1259680..1260246) Cyclobacterium marinum DSM 745 11037375 YP_004773072.1 CDS Cycma_1069 NC_015914.1 1260327 1261316 R PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; COGs: COG0536 GTPase; HAMAP: GTPase obg; InterPro IPR014100:IPR006169:IPR002917; KEGG: mtt:Ftrac_1939 GTP-binding protein obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; GTPase ObgE complement(1260327..1261316) Cyclobacterium marinum DSM 745 11037376 YP_004773073.1 CDS Cycma_1070 NC_015914.1 1261432 1262004 R PFAM: Adenylate kinase; TIGRFAM: adenylate kinases; COGs: COG0563 Adenylate kinase and related kinase; HAMAP: Adenylate kinase; InterPro IPR006259:IPR000850; KEGG: mtt:Ftrac_1938 adenylate kinase; PFAM: Adenylate kinase; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; adenylate kinase complement(1261432..1262004) Cyclobacterium marinum DSM 745 11037377 YP_004773074.1 CDS Cycma_1071 NC_015914.1 1262032 1262568 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904:IPR000836; KEGG: bvu:BVU_1681 hypoxanthine guanine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: uncharacterized protein; TIGRFAM: Hypoxanthine phosphoribosyl transferase; hypoxanthine phosphoribosyltransferase complement(1262032..1262568) Cyclobacterium marinum DSM 745 11037378 YP_004773075.1 CDS Cycma_1072 NC_015914.1 1262648 1263565 R PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR002933; KEGG: mtt:Ftrac_1936 peptidase M20; PFAM: Peptidase M20; SPTR: Aminopeptidase, M42 family; peptidase M20 complement(1262648..1263565) Cyclobacterium marinum DSM 745 11037379 YP_004773076.1 CDS Cycma_1073 NC_015914.1 1263741 1265012 D PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: fjo:Fjoh_3415 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: thrombospondin type 3 repeat:OmpA/MotB; OmpA/MotB domain-containing protein 1263741..1265012 Cyclobacterium marinum DSM 745 11037380 YP_004773077.1 CDS Cycma_1074 NC_015914.1 1265083 1265724 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: sli:Slin_5853 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; phosphoribosyltransferase 1265083..1265724 Cyclobacterium marinum DSM 745 11037381 YP_004773078.1 CDS Cycma_1075 NC_015914.1 1265737 1266663 D PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: mtt:Ftrac_1934 Na+/ca+ antiporter, caca family; PFAM: Sodium/calcium exchanger membrane region; SPTR: K+-dependent Na+/Ca+ exchanger-like protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; CaCA family Na+/Ca+ antiporter 1265737..1266663 Cyclobacterium marinum DSM 745 11037382 YP_004773079.1 CDS Cycma_1076 NC_015914.1 1266660 1267118 D KEGG: sli:Slin_5175 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1266660..1267118 Cyclobacterium marinum DSM 745 11037383 YP_004773080.1 CDS Cycma_1077 NC_015914.1 1267171 1268127 R KEGG: psn:Pedsa_2602 peptidylprolyl isomerase FKBP-type; SPTR: Peptidylprolyl isomerase FKBP-type; hypothetical protein complement(1267171..1268127) Cyclobacterium marinum DSM 745 11037384 YP_004773081.1 CDS Cycma_1078 NC_015914.1 1268152 1269471 R KEGG: psn:Pedsa_2112 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1268152..1269471) Cyclobacterium marinum DSM 745 11037385 YP_004773082.1 CDS Cycma_1079 NC_015914.1 1269452 1270000 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: psn:Pedsa_2111 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1269452..1270000) Cyclobacterium marinum DSM 745 11037386 YP_004773083.1 CDS Cycma_1080 NC_015914.1 1270417 1271139 D KEGG: sli:Slin_0445 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1270417..1271139 Cyclobacterium marinum DSM 745 11037387 YP_004773084.1 CDS Cycma_1081 NC_015914.1 1271208 1272086 D PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; COGs: COG0320 Lipoate synthase; HAMAP: Lipoate synthase; InterPro IPR003698:IPR006638:IPR007197; KEGG: mtt:Ftrac_2810 lipoic acid synthetase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: Lipoate synthase; lipoyl synthase 1271208..1272086 Cyclobacterium marinum DSM 745 11037388 YP_004773085.1 CDS Cycma_1082 NC_015914.1 1272330 1272926 D KEGG: chu:CHU_3666 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1272330..1272926 Cyclobacterium marinum DSM 745 11037389 YP_004773086.1 CDS Cycma_1083 NC_015914.1 1273036 1274736 D PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610:IPR001667:IPR003156; KEGG: mtt:Ftrac_1440 exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ 1273036..1274736 Cyclobacterium marinum DSM 745 11037390 YP_004773087.1 CDS Cycma_1084 NC_015914.1 1274739 1275470 D PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_1441 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter 1274739..1275470 Cyclobacterium marinum DSM 745 11037391 YP_004773088.1 CDS Cycma_1085 NC_015914.1 1275491 1277008 D PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: mtt:Ftrac_1442 gh3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter family protein; GH3 auxin-responsive promoter 1275491..1277008 Cyclobacterium marinum DSM 745 11037392 YP_004773089.1 CDS Cycma_1086 NC_015914.1 1277631 1278443 R PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: mtt:Ftrac_2796 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; nucleotide pyrophosphohydrolase complement(1277631..1278443) Cyclobacterium marinum DSM 745 11037393 YP_004773090.1 CDS Cycma_1087 NC_015914.1 1278519 1278749 D KEGG: mtt:Ftrac_2797 membrane or secreted protein; SPTR: uncharacterized protein; hypothetical protein 1278519..1278749 Cyclobacterium marinum DSM 745 11037394 YP_004773091.1 CDS Cycma_1088 NC_015914.1 1278799 1280187 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: mtt:Ftrac_2642 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1278799..1280187 Cyclobacterium marinum DSM 745 11037395 YP_004773092.1 CDS Cycma_1089 NC_015914.1 1280212 1281360 D PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: lby:Lbys_2866 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase; class V aminotransferase 1280212..1281360 Cyclobacterium marinum DSM 745 11037396 YP_004773093.1 CDS Cycma_1090 NC_015914.1 1281362 1282324 R PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: Serine racemase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Pyridoxal-phosphate dependent enzyme; pyridoxal-5'-phosphate-dependent protein beta subunit complement(1281362..1282324) Cyclobacterium marinum DSM 745 11037397 YP_004773094.1 CDS Cycma_1091 NC_015914.1 1282476 1283183 D PFAM: Peptidase M23; InterPro IPR016047; KEGG: mtt:Ftrac_0459 peptidase M23; PFAM: Peptidase M23; SPTR: M23/M37 peptidase/aminotransferase, class III; peptidase M23 1282476..1283183 Cyclobacterium marinum DSM 745 11037398 YP_004773095.1 CDS Cycma_1092 NC_015914.1 1283167 1284297 D PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933; KEGG: csa:Csal_1797 peptidase M20D, amidohydrolase; PFAM: Peptidase M20; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase 1283167..1284297 Cyclobacterium marinum DSM 745 11037399 YP_004773096.1 CDS Cycma_1093 NC_015914.1 1284301 1285455 D PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821:IPR001608:IPR011079; KEGG: mtt:Ftrac_3256 alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; SPTR: Alanine racemase 1; TIGRFAM: Alanine racemase; alanine racemase 1284301..1285455 Cyclobacterium marinum DSM 745 11037400 YP_004773097.1 CDS Cycma_1094 NC_015914.1 1285511 1285939 D PFAM: META domain; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: chl:Chy400_1574 hypothetical protein; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: uncharacterized protein; hypothetical protein 1285511..1285939 Cyclobacterium marinum DSM 745 11037401 YP_004773098.1 CDS Cycma_1095 NC_015914.1 1286024 1286878 R PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR004810:IPR002912:IPR002376; KEGG: ppn:Palpr_2909 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; SPTR: Formyltetrahydrofolate deformylase; TIGRFAM: Formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase complement(1286024..1286878) Cyclobacterium marinum DSM 745 11037402 YP_004773099.1 CDS Cycma_1096 NC_015914.1 1286926 1289862 R PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001:IPR001650:IPR000330; KEGG: mtt:Ftrac_2608 SNF2-related protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Snf2 family protein; SNF2-like protein complement(1286926..1289862) Cyclobacterium marinum DSM 745 11037403 YP_004773100.1 CDS Cycma_1097 NC_015914.1 1289961 1291184 R PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2607 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Membrane protein; hypothetical protein complement(1289961..1291184) Cyclobacterium marinum DSM 745 11037404 YP_004773101.1 CDS Cycma_1098 NC_015914.1 1291258 1291644 R PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: mtt:Ftrac_2606 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; ribosome-binding factor A complement(1291258..1291644) Cyclobacterium marinum DSM 745 11037405 YP_004773102.1 CDS Cycma_1099 NC_015914.1 1291730 1293136 D KEGG: mtt:Ftrac_2605 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1291730..1293136 Cyclobacterium marinum DSM 745 11037406 YP_004773103.1 CDS Cycma_1100 NC_015914.1 1293159 1293593 R PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: mtt:Ftrac_2617 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase complement(1293159..1293593) Cyclobacterium marinum DSM 745 11037407 YP_004773104.1 CDS Cycma_1101 NC_015914.1 1293604 1294449 R PFAM: Sec-independent protein translocase (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822:IPR002033; KEGG: mtt:Ftrac_3133 sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Twin arginine-targeting protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; Sec-independent protein translocase subunit TatC complement(1293604..1294449) Cyclobacterium marinum DSM 745 11037408 YP_004773105.1 CDS Cycma_1102 NC_015914.1 1294461 1295729 R PFAM: Serine hydroxymethyltransferase; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: mtt:Ftrac_3134 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; SPTR: Glycine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(1294461..1295729) Cyclobacterium marinum DSM 745 11037409 YP_004773106.1 CDS Cycma_1103 NC_015914.1 1296179 1296550 D SPTR: UDP-glucuronosyltransferase 2B8; hypothetical protein 1296179..1296550 Cyclobacterium marinum DSM 745 11037410 YP_004773107.1 CDS Cycma_1104 NC_015914.1 1296625 1297548 D PFAM: Membrane transport protein; COGs: COG0679 permease; InterPro IPR004776; KEGG: fjo:Fjoh_5018 auxin efflux carrier; PFAM: Auxin efflux carrier; SPTR: uncharacterized protein; auxin efflux carrier family protein 1296625..1297548 Cyclobacterium marinum DSM 745 11037411 YP_004773108.1 CDS Cycma_1105 NC_015914.1 1297555 1300566 R PFAM: AsmA family; KEGG: chu:CHU_0135 outer membrane integrity protein; SPTR: membrane spanning protein, required for outer membrane integrity; outer membrane integrity protein complement(1297555..1300566) Cyclobacterium marinum DSM 745 11037412 YP_004773109.1 CDS Cycma_1106 NC_015914.1 1300905 1301513 R PFAM: NADP oxidoreductase coenzyme F420-dependent; COGs: COG2085 dinucleotide-binding protein; InterPro IPR004455; KEGG: sus:Acid_3142 NADP oxidoreductase, coenzyme F420-dependent; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: NADP oxidoreductase coenzyme F420-dependent superfamily; coenzyme F420-dependent NADP oxidoreductase complement(1300905..1301513) Cyclobacterium marinum DSM 745 11037413 YP_004773110.1 CDS Cycma_1107 NC_015914.1 1301738 1302535 R PFAM: Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase; InterPro IPR000760; KEGG: mtt:Ftrac_2001 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol-phosphate phosphatase; inositol monophosphatase complement(1301738..1302535) Cyclobacterium marinum DSM 745 11037414 YP_004773111.1 CDS Cycma_1108 NC_015914.1 1302537 1303217 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR008189:IPR000878; KEGG: dfe:Dfer_4999 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Ribosomal RNA small subunit methyltransferase I; TIGRFAM: Uncharacterised protein family UPF0011; ribosomal RNA small subunit methyltransferase I complement(1302537..1303217) Cyclobacterium marinum DSM 745 11037415 YP_004773112.1 CDS Cycma_1109 NC_015914.1 1303225 1303455 R PFAM: Pterin 4 alpha carbinolamine dehydratase; COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: mtt:Ftrac_2004 pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; SPTR: Pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase complement(1303225..1303455) Cyclobacterium marinum DSM 745 11037416 YP_004773113.1 CDS Cycma_1110 NC_015914.1 1303467 1303733 R PFAM: Protein of unknown function (DUF493); KEGG: mtt:Ftrac_2005 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1303467..1303733) Cyclobacterium marinum DSM 745 11037417 YP_004773114.1 CDS Cycma_1111 NC_015914.1 1303832 1305946 R PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: mtt:Ftrac_2006 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1303832..1305946) Cyclobacterium marinum DSM 745 11037418 YP_004773115.1 CDS Cycma_1112 NC_015914.1 1306041 1307300 R PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: mtt:Ftrac_2007 cbs domain containing protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SPTR: CBS domain protein; hypothetical protein complement(1306041..1307300) Cyclobacterium marinum DSM 745 11037419 YP_004773116.1 CDS Cycma_1113 NC_015914.1 1307300 1307518 R SPTR: uncharacterized protein; hypothetical protein complement(1307300..1307518) Cyclobacterium marinum DSM 745 11037420 YP_004773117.1 CDS Cycma_1114 NC_015914.1 1307528 1308133 R PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: mtt:Ftrac_2008 hypothetical protein; PFAM: Protein of unknown function DUF1239; SPTR: Lipoprotein; hypothetical protein complement(1307528..1308133) Cyclobacterium marinum DSM 745 11037421 YP_004773118.1 CDS Cycma_1115 NC_015914.1 1308377 1309696 R KEGG: mtt:Ftrac_2009 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1308377..1309696) Cyclobacterium marinum DSM 745 11037422 YP_004773119.1 CDS Cycma_1116 NC_015914.1 1309693 1310988 R KEGG: mtt:Ftrac_2010 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1309693..1310988) Cyclobacterium marinum DSM 745 11037423 YP_004773120.1 CDS Cycma_1117 NC_015914.1 1310975 1311700 R PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG1521 transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: mtt:Ftrac_2011 transcriptional acitvator, baf family; PFAM: Bordetella pertussis Bvg accessory factor; SPTR: Type III pantothenate kinase 1; TIGRFAM: Bordetella pertussis Bvg accessory factor; Baf family transcriptional acitvator complement(1310975..1311700) Cyclobacterium marinum DSM 745 11037424 YP_004773121.1 CDS Cycma_1118 NC_015914.1 1311806 1312924 D PFAM: Uncharacterised protein family (UPF0075); COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: fba:FIC_01306 anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; SPTR: Anhydro-N-acetylmuramic acid kinase; hypothetical protein 1311806..1312924 Cyclobacterium marinum DSM 745 11037425 YP_004773122.1 CDS Cycma_1119 NC_015914.1 1312921 1314147 D PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_2013 glu/leu/phe/val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 1312921..1314147 Cyclobacterium marinum DSM 745 11037426 YP_004773123.1 CDS Cycma_1120 NC_015914.1 1314326 1315849 D PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: mtt:Ftrac_2014 transporter, uit6 family; PFAM: Divalent ion symporter; SPTR: citrate transporter; citrate transporter 1314326..1315849 Cyclobacterium marinum DSM 745 11037427 YP_004773124.1 CDS Cycma_1121 NC_015914.1 1316105 1316668 R KEGG: lby:Lbys_0463 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1316105..1316668) Cyclobacterium marinum DSM 745 11037428 YP_004773125.1 CDS Cycma_1122 NC_015914.1 1316674 1318203 R PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR005995:IPR011258:IPR006124; KEGG: chu:CHU_3731 phosphoglyceromutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; manually curated; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(1316674..1318203) Cyclobacterium marinum DSM 745 11037429 YP_004773126.1 CDS Cycma_1123 NC_015914.1 1318453 1318854 D KEGG: bfs:BF1399 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1318453..1318854 Cyclobacterium marinum DSM 745 11037430 YP_004773127.1 CDS Cycma_1124 NC_015914.1 1318898 1319776 D PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR002638; KEGG: mtt:Ftrac_2356 nicotinate-nucleotide pyrophosphorylase (carboxylating); PFAM: Quinolinate phosphoribosyl transferase; SPTR: Nicotinate-nucleotide diphosphorylase (Carboxylating); TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 1318898..1319776 Cyclobacterium marinum DSM 745 11037431 YP_004773128.1 CDS Cycma_1125 NC_015914.1 1319733 1321544 R PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC transporter, permease/ATP-binding protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: mtt:Ftrac_2501 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: Efflux ABC transporter, permease/ATP-binding protein; ABC transporter complement(1319733..1321544) Cyclobacterium marinum DSM 745 11037432 YP_004773129.1 CDS Cycma_1126 NC_015914.1 1321582 1321920 R KEGG: dfe:Dfer_3777 conserved hypothetical protein, membrane; SPTR: uncharacterized protein; hypothetical protein complement(1321582..1321920) Cyclobacterium marinum DSM 745 11037433 YP_004773130.1 CDS Cycma_1127 NC_015914.1 1321931 1323256 R PFAM: Amino acid kinase; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048; KEGG: cpi:Cpin_6874 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase region; aspartate kinase complement(1321931..1323256) Cyclobacterium marinum DSM 745 11037434 YP_004773131.1 CDS Cycma_1128 NC_015914.1 1323298 1323774 R PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: mtt:Ftrac_2508 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(1323298..1323774) Cyclobacterium marinum DSM 745 11037435 YP_004773132.1 CDS Cycma_1129 NC_015914.1 1323851 1324570 R PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_2509 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: uncharacterized protein; hypothetical protein complement(1323851..1324570) Cyclobacterium marinum DSM 745 11037436 YP_004773133.1 CDS Cycma_1130 NC_015914.1 1324851 1326260 R PFAM: Bacterial protein of unknown function (DUF839); COGs: COG3211 phosphatase; InterPro IPR008557; KEGG: cse:Cseg_1676 hypothetical protein; PFAM: Protein of unknown function DUF839, bacterial; SPTR: uncharacterized protein; hypothetical protein complement(1324851..1326260) Cyclobacterium marinum DSM 745 11037437 YP_004773134.1 CDS Cycma_1131 NC_015914.1 1326796 1327869 D KEGG: rba:RB12464 potassium channel protein; SPTR: Similar to potassium channel protein; hypothetical protein 1326796..1327869 Cyclobacterium marinum DSM 745 11037438 YP_004773135.1 CDS Cycma_1132 NC_015914.1 1327971 1328906 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: fbc:FB2170_16846 hypothetical protein; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; G-D-S-L family lipolytic protein 1327971..1328906 Cyclobacterium marinum DSM 745 11037439 YP_004773136.1 CDS Cycma_1133 NC_015914.1 1329318 1330187 R PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATP synthase gamma chain; InterPro IPR000131; KEGG: chu:CHU_0184 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma complement(1329318..1330187) Cyclobacterium marinum DSM 745 11037440 YP_004773137.1 CDS Cycma_1134 NC_015914.1 1330233 1331810 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR005294:IPR004100:IPR000194:IPR000793; KEGG: sli:Slin_6523 ATP synthase F1 subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; ATP synthase subunit alpha complement(1330233..1331810) Cyclobacterium marinum DSM 745 11037441 YP_004773138.1 CDS Cycma_1135 NC_015914.1 1331848 1332408 R PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: mtt:Ftrac_2570 ATP synthase f1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit delta; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta complement(1331848..1332408) Cyclobacterium marinum DSM 745 11037442 YP_004773139.1 CDS Cycma_1136 NC_015914.1 1332419 1332913 R PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATP synthase subunit b; InterPro IPR005864:IPR002146; KEGG: zpr:ZPR_0063 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: ATP synthase subunit b; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; ATP synthase subunit b complement(1332419..1332913) Cyclobacterium marinum DSM 745 11037443 YP_004773140.1 CDS Cycma_1137 NC_015914.1 1332992 1333249 R PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; HAMAP: ATPase, F0 complex, subunit C; InterPro IPR005953:IPR000454:IPR002379; KEGG: sli:Slin_3215 ATP synthase F0 C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: ATP synthase subunit C; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; ATP synthase subunit c complement(1332992..1333249) Cyclobacterium marinum DSM 745 11037444 YP_004773141.1 CDS Cycma_1138 NC_015914.1 1333290 1334312 R PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATP synthase subunit a; InterPro IPR000568; KEGG: aas:Aasi_0061 ATP synthase F0 subunit A; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a complement(1333290..1334312) Cyclobacterium marinum DSM 745 11037445 YP_004773142.1 CDS Cycma_1139 NC_015914.1 1334331 1334720 R KEGG: dfe:Dfer_5026 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1334331..1334720) Cyclobacterium marinum DSM 745 11037446 YP_004773143.1 CDS Cycma_1140 NC_015914.1 1334758 1334997 R SPTR: uncharacterized protein; hypothetical protein complement(1334758..1334997) Cyclobacterium marinum DSM 745 11037447 YP_004773144.1 CDS Cycma_1141 NC_015914.1 1334963 1335382 R PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: mtt:Ftrac_2564 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: uncharacterized protein; hypothetical protein complement(1334963..1335382) Cyclobacterium marinum DSM 745 11037448 YP_004773145.1 CDS Cycma_1142 NC_015914.1 1335385 1336254 R PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_2563 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; peptidase M23 complement(1335385..1336254) Cyclobacterium marinum DSM 745 11037449 YP_004773146.1 CDS Cycma_1143 NC_015914.1 1336365 1339001 D InterPro IPR019734; KEGG: mtt:Ftrac_2562 tetratricopeptide tpr_1 repeat-containing protein; SPTR: Gliding motility-related protein TPR repeat-containing protein; manually curated; hypothetical protein 1336365..1339001 Cyclobacterium marinum DSM 745 11037450 YP_004773147.1 CDS Cycma_1144 NC_015914.1 1339010 1341319 D PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460; KEGG: mtt:Ftrac_2561 peptidoglycan glycosyltransferase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: penicillin-binding protein 1A; manually curated; glycosyl transferase family protein 1339010..1341319 Cyclobacterium marinum DSM 745 11037451 YP_004773148.1 CDS Cycma_1145 NC_015914.1 1341534 1343336 D PFAM: UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: UvrABC system protein C; InterPro IPR004791:IPR000305:IPR001162; KEGG: mtt:Ftrac_2560 excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC subunit C; TIGRFAM: Excinuclease ABC, C subunit; UvrABC system protein C 1341534..1343336 Cyclobacterium marinum DSM 745 11037452 YP_004773149.1 CDS Cycma_1146 NC_015914.1 1343389 1344213 R TIGRFAM: gliding motility associated protein GldN; InterPro IPR019847; KEGG: mtt:Ftrac_2559 gliding motility associated protein gldn; SPTR: Gliding motility associated protein GldN subfamily; TIGRFAM: Gliding motility associated protein GldN; gliding motility associated protein GldN complement(1343389..1344213) Cyclobacterium marinum DSM 745 11037453 YP_004773150.1 CDS Cycma_1147 NC_015914.1 1344257 1345858 R PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: chu:CHU_0173 gliding motility-like protein; SPTR: Gliding motility-related protein; TIGRFAM: Gliding motility-associated protein GldM; gliding motility-associated protein GldM complement(1344257..1345858) Cyclobacterium marinum DSM 745 11037454 YP_004773151.1 CDS Cycma_1148 NC_015914.1 1345916 1346677 R TIGRFAM: gliding motility-associated protein GldL; InterPro IPR019852; KEGG: mtt:Ftrac_2557 protein involved in gliding motility gldl; SPTR: Gliding motility-related protein; TIGRFAM: Gliding motility-associated protein, GldL; gliding motility-associated protein GldL complement(1345916..1346677) Cyclobacterium marinum DSM 745 11037455 YP_004773152.1 CDS Cycma_1149 NC_015914.1 1346789 1347910 R PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK; COGs: COG1262 conserved hypothetical protein; InterPro IPR019867:IPR005532; KEGG: chu:CHU_0171 gliding motility-like protein; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldK; TIGRFAM: Gliding motility-associated lipoprotein GldK, short form; gliding motility-associated lipoprotein GldK complement(1346789..1347910) Cyclobacterium marinum DSM 745 11037456 YP_004773153.1 CDS Cycma_1150 NC_015914.1 1347998 1348972 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: sli:Slin_3226 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(1347998..1348972) Cyclobacterium marinum DSM 745 11037457 YP_004773154.1 CDS Cycma_1151 NC_015914.1 1349050 1349823 R PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: mtt:Ftrac_2554 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 complement(1349050..1349823) Cyclobacterium marinum DSM 745 11037458 YP_004773155.1 CDS Cycma_1152 NC_015914.1 1349840 1350952 R KEGG: lby:Lbys_1727 hypothetical protein; SPTR: flippase; hypothetical protein complement(1349840..1350952) Cyclobacterium marinum DSM 745 11037459 YP_004773156.1 CDS Cycma_1153 NC_015914.1 1350952 1352628 R PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: chu:CHU_0166 outer membrane protein; PFAM: Bacterial surface antigen (D15); SPTR: outer membrane protein; surface antigen (D15) complement(1350952..1352628) Cyclobacterium marinum DSM 745 11037460 YP_004773157.1 CDS Cycma_1154 NC_015914.1 1352682 1353602 R PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: dfe:Dfer_4750 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: gluconolactonase; SMP-30/gluconolaconase/LRE-like region-containing protein complement(1352682..1353602) Cyclobacterium marinum DSM 745 11037461 YP_004773158.1 CDS Cycma_1155 NC_015914.1 1353891 1355015 D PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR004559:IPR006638:IPR007197:IPR010723; KEGG: mtt:Ftrac_2551 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 1353891..1355015 Cyclobacterium marinum DSM 745 11037462 YP_004773159.1 CDS Cycma_1156 NC_015914.1 1355039 1355353 D PFAM: Protein of unknown function (DUF721); InterPro IPR007922; KEGG: dfe:Dfer_2709 protein of unknown function DUF721; PFAM: Protein of unknown function DUF721; SPTR: uncharacterized protein; hypothetical protein 1355039..1355353 Cyclobacterium marinum DSM 745 11037463 YP_004773160.1 CDS Cycma_1157 NC_015914.1 1355505 1356953 R PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: aldehyde dehydrogenase (NADP(+)); PFAM: Aldehyde dehydrogenase; SPTR: NADP-dependent fatty aldehyde dehydrogenase; aldehyde dehydrogenase complement(1355505..1356953) Cyclobacterium marinum DSM 745 11037464 YP_004773161.1 CDS Cycma_1158 NC_015914.1 1357103 1358326 R PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Dipeptidase; manually curated; peptidase M19 complement(1357103..1358326) Cyclobacterium marinum DSM 745 11037465 YP_004773162.1 CDS Cycma_1159 NC_015914.1 1358519 1359415 D KEGG: mtt:Ftrac_2802 ATP/GTP-binding protein; SPTR: periplasmic ATP/GTP-binding protein; ATP/GTP-binding protein 1358519..1359415 Cyclobacterium marinum DSM 745 11037466 YP_004773163.1 CDS Cycma_1160 NC_015914.1 1359609 1360613 D PFAM: Fatty acid desaturase; InterPro IPR005067; KEGG: acyl-(acyl-carrier-protein) desaturase; PFAM: Fatty acid desaturase, type 2; SPTR: Stearoyl-CoA 9-desaturase superfamily; fatty acid desaturase 1359609..1360613 Cyclobacterium marinum DSM 745 11037467 YP_004773164.1 CDS Cycma_1161 NC_015914.1 1360840 1363620 R KEGG: fbc:FB2170_12831 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1360840..1363620) Cyclobacterium marinum DSM 745 11037468 YP_004773165.1 CDS Cycma_1162 NC_015914.1 1363797 1365926 R PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR018329:IPR006293:IPR014001:IPR001650:IPR 002121:IPR011545:IPR018982; KEGG: gbm:Gbem_3690 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; ATP-dependent DNA helicase RecQ complement(1363797..1365926) Cyclobacterium marinum DSM 745 11037469 YP_004773166.1 CDS Cycma_1163 NC_015914.1 1366248 1367972 R KEGG: mtt:Ftrac_1357 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1366248..1367972) Cyclobacterium marinum DSM 745 11037470 YP_004773167.1 CDS Cycma_1164 NC_015914.1 1368218 1370029 R PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho; COGs: COG1158 Transcription termination factor; InterProIPR004665:IPR011129:IPR003593:IPR011112:IPR 011113:IPR000194; KEGG: mtt:Ftrac_2790 transcription termination factor rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; transcription termination factor Rho complement(1368218..1370029) Cyclobacterium marinum DSM 745 11037471 YP_004773168.1 CDS Cycma_1165 NC_015914.1 1370306 1371400 D PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: lby:Lbys_1735 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: permease; hypothetical protein 1370306..1371400 Cyclobacterium marinum DSM 745 11037472 YP_004773169.1 CDS Cycma_1166 NC_015914.1 1371416 1371880 R KEGG: zpr:ZPR_1594 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1371416..1371880) Cyclobacterium marinum DSM 745 11037473 YP_004773170.1 CDS Cycma_1167 NC_015914.1 1371967 1372830 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: pbs:Plabr_3101 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1371967..1372830) Cyclobacterium marinum DSM 745 11037474 YP_004773171.1 CDS Cycma_1168 NC_015914.1 1373016 1374044 R COGs: COG2378 transcriptional regulator protein; KEGG: Phytanoyl-CoA dioxygenase; SPTR: uncharacterized protein; phytanoyl-CoA dioxygenase complement(1373016..1374044) Cyclobacterium marinum DSM 745 11037475 YP_004773172.1 CDS Cycma_1169 NC_015914.1 1374129 1375496 D PFAM: Uncharacterized protein family UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: hypothetical protein; PFAM: Uncharacterised protein family UPF0027; SPTR: uncharacterized protein; hypothetical protein 1374129..1375496 Cyclobacterium marinum DSM 745 11037476 YP_004773173.1 CDS Cycma_1170 NC_015914.1 1375532 1376494 R PFAM: Glycosyl hydrolases family 43; KEGG: beta-galactosidase I; SPTR: Beta-galactosidase I; beta-galactosidase I complement(1375532..1376494) Cyclobacterium marinum DSM 745 11037477 YP_004773174.1 CDS Cycma_1171 NC_015914.1 1376967 1380068 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4717 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor 1376967..1380068 Cyclobacterium marinum DSM 745 11037478 YP_004773175.1 CDS Cycma_1172 NC_015914.1 1380096 1381601 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4718 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 1380096..1381601 Cyclobacterium marinum DSM 745 11037479 YP_004773176.1 CDS Cycma_1173 NC_015914.1 1381933 1382973 D PFAM: Trehalose utilisation; KEGG: pbs:Plabr_3359 signal peptide domain-containing protein; SPTR: uncharacterized protein; hypothetical protein 1381933..1382973 Cyclobacterium marinum DSM 745 11037480 YP_004773177.1 CDS Cycma_1174 NC_015914.1 1383002 1383853 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_1263 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: D-Tagatose 3-epimerase; xylose isomerase domain-containing protein 1383002..1383853 Cyclobacterium marinum DSM 745 11037481 YP_004773178.1 CDS Cycma_1175 NC_015914.1 1383913 1384737 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: dfe:Dfer_3172 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1383913..1384737 Cyclobacterium marinum DSM 745 11037482 YP_004773179.1 CDS Cycma_1176 NC_015914.1 1384741 1385544 D PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sli:Slin_1265 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein; alpha/beta hydrolase 1384741..1385544 Cyclobacterium marinum DSM 745 11037483 YP_004773180.1 CDS Cycma_1177 NC_015914.1 1385880 1386572 D KEGG: dat:HRM2_08410 multidrug resistance protein (efflux pump/antiporter); SPTR: Multidrug resistance protein (Efflux pump/antiporter); multidrug resistance efflux pump/antiporter 1385880..1386572 Cyclobacterium marinum DSM 745 11037484 YP_004773181.1 CDS Cycma_1178 NC_015914.1 1386703 1387833 D InterPro IPR013517; KEGG: dfe:Dfer_1655 FG-GAP repeat-containing protein; PFAM: FG-GAP; SPTR: uncharacterized protein; hypothetical protein 1386703..1387833 Cyclobacterium marinum DSM 745 11037485 YP_004773182.1 CDS Cycma_1179 NC_015914.1 1388004 1389581 D PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_0979 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase 1388004..1389581 Cyclobacterium marinum DSM 745 11037486 YP_004773183.1 CDS Cycma_1180 NC_015914.1 1389838 1390347 D PFAM: Cupin superfamily (DUF985); COGs: COG3542 conserved hypothetical protein; InterPro IPR009327; KEGG: zpr:ZPR_1700 hypothetical protein; PFAM: Protein of unknown function DUF985; SPTR: uncharacterized protein; hypothetical protein 1389838..1390347 Cyclobacterium marinum DSM 745 11037487 YP_004773184.1 CDS Cycma_1181 NC_015914.1 1390552 1392093 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3983 Iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate sulfatase; sulfatase 1390552..1392093 Cyclobacterium marinum DSM 745 11037488 YP_004773185.1 CDS Cycma_1182 NC_015914.1 1392556 1393329 D PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic; COGs: COG1273 conserved hypothetical protein; HAMAP: DNA repair protein; InterPro IPR009187:IPR006164; KEGG: gfo:GFO_0299 Ku70/Ku80 domain-containing protein; PFAM: DNA helicase, ATP-dependent, Ku type; SMART: DNA helicase, ATP-dependent, Ku type; SPTR: Probable DNA repair protein GFO_0299; TIGRFAM: Ku, prokaryotic type; DNA repair protein 1392556..1393329 Cyclobacterium marinum DSM 745 11037489 YP_004773186.1 CDS Cycma_1183 NC_015914.1 1393330 1395756 D PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain; COGs: COG3285 eukaryotic-type DNA primase; InterProIPR014144:IPR014146:IPR014143:IPR014145:IPR 012310:IPR012309:IPR002755; KEGG: zpr:ZPR_3654 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; DNA primase, small subunit; SPTR: ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase region; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain; DNA ligase D 1393330..1395756 Cyclobacterium marinum DSM 745 11037490 YP_004773187.1 CDS Cycma_1184 NC_015914.1 1396059 1396634 D PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693 intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: cpi:Cpin_7251 intracellular protease, PfpI family; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI family protein; TIGRFAM: Peptidase C56, PfpI; PfpI family intracellular protease 1396059..1396634 Cyclobacterium marinum DSM 745 11037491 YP_004773188.1 CDS Cycma_1185 NC_015914.1 1397188 1398219 D PFAM: Bestrophin; COGs: COG3781 membrane protein; InterPro IPR007913; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1397188..1398219 Cyclobacterium marinum DSM 745 11037492 YP_004773189.1 CDS Cycma_1186 NC_015914.1 1398250 1398729 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: zpr:ZPR_2068 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Membrane protein; manually curated; helix-turn-helix domain-containing protein 1398250..1398729 Cyclobacterium marinum DSM 745 11037493 YP_004773190.1 CDS Cycma_1187 NC_015914.1 1399015 1399746 D PFAM: Domain of unknown function (DUF1083); InterPro IPR010502; KEGG: sur:STAUR_3356 hypothetical protein; SPTR: Conserved uncharacterized protein; hypothetical protein 1399015..1399746 Cyclobacterium marinum DSM 745 11037494 YP_004773191.1 CDS Cycma_1188 NC_015914.1 1400016 1401593 D PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; G-D-S-L family lipolytic protein 1400016..1401593 Cyclobacterium marinum DSM 745 11037495 YP_004773192.1 CDS Cycma_1189 NC_015914.1 1401774 1402472 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cly:Celly_2950 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; winged helix family two component transcriptional regulator 1401774..1402472 Cyclobacterium marinum DSM 745 11037496 YP_004773193.1 CDS Cycma_1190 NC_015914.1 1402478 1403935 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: cao:Celal_4142 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Sensory box histidine kinase; integral membrane sensor signal transduction histidine kinase 1402478..1403935 Cyclobacterium marinum DSM 745 11037497 YP_004773194.1 CDS Cycma_1191 NC_015914.1 1404340 1405587 D PFAM: Spondin_N; KEGG: scl:sce6628 secreted protein; SPTR: uncharacterized protein; secreted protein 1404340..1405587 Cyclobacterium marinum DSM 745 11037498 YP_004773195.1 CDS Cycma_1192 NC_015914.1 1405832 1408483 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003594:IPR013656:IPR 013767:IPR013655; KEGG: cly:Celly_3194 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; PAS fold-3; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; SPTR: sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 1405832..1408483 Cyclobacterium marinum DSM 745 11037499 YP_004773196.1 CDS Cycma_1193 NC_015914.1 1408588 1408914 D PFAM: Small Multidrug Resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Quaternary ammonium compound-resistance protein SugE; small multidrug resistance protein 1408588..1408914 Cyclobacterium marinum DSM 745 11037500 YP_004773197.1 CDS Cycma_1194 NC_015914.1 1409292 1412480 R PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; KEGG: fba:FIC_01029 adenine specific DNA methyltransferase; SPTR: Adenine specific DNA methyltransferase; adenine-specific DNA methyltransferase complement(1409292..1412480) Cyclobacterium marinum DSM 745 11037501 YP_004773198.1 CDS Cycma_1195 NC_015914.1 1412639 1413658 R hypothetical protein complement(1412639..1413658) Cyclobacterium marinum DSM 745 11037502 YP_004773199.1 CDS Cycma_1196 NC_015914.1 1413995 1414090 D hypothetical protein 1413995..1414090 Cyclobacterium marinum DSM 745 11037503 YP_004773200.1 CDS Cycma_1197 NC_015914.1 1414131 1414514 D KEGG: npu:Npun_R5806 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1414131..1414514 Cyclobacterium marinum DSM 745 11037504 YP_004773201.1 CDS Cycma_1198 NC_015914.1 1414820 1415062 D hypothetical protein 1414820..1415062 Cyclobacterium marinum DSM 745 11037505 YP_004773202.1 CDS Cycma_1199 NC_015914.1 1415397 1415624 R COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: cpi:Cpin_5711 XRE family transcriptional regulator; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; XRE family transcriptional regulator complement(1415397..1415624) Cyclobacterium marinum DSM 745 11037506 YP_004773203.1 CDS Cycma_1200 NC_015914.1 1415628 1416107 R PFAM: Protein of unknown function (DUF3036); KEGG: cpi:Cpin_5710 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1415628..1416107) Cyclobacterium marinum DSM 745 11037507 YP_004773204.1 CDS Cycma_1201 NC_015914.1 1416545 1416946 D PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: dfe:Dfer_4566 Fur family transcriptional regulator protein; SPTR: Ferric uptake regulator family protein; Fur family transcriptional regulator protein 1416545..1416946 Cyclobacterium marinum DSM 745 11037508 YP_004773205.1 CDS Cycma_1202 NC_015914.1 1416969 1419362 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_3288 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: uncharacterized protein; TonB-dependent receptor 1416969..1419362 Cyclobacterium marinum DSM 745 11037509 YP_004773206.1 CDS Cycma_1203 NC_015914.1 1419379 1419915 D KEGG: fjo:Fjoh_3287 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 1419379..1419915 Cyclobacterium marinum DSM 745 11037510 YP_004773207.1 CDS Cycma_1204 NC_015914.1 1420413 1420532 D hypothetical protein 1420413..1420532 Cyclobacterium marinum DSM 745 11037511 YP_004773208.1 CDS Cycma_1205 NC_015914.1 1420555 1421442 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bth:BT_0753 anti-sigma factor; PFAM: FecR protein; SPTR: uncharacterized protein; anti-FecI sigma factor FecR 1420555..1421442 Cyclobacterium marinum DSM 745 11037512 YP_004773209.1 CDS Cycma_1206 NC_015914.1 1421477 1424929 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: bhl:Bache_0097 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug 1421477..1424929 Cyclobacterium marinum DSM 745 11037513 YP_004773210.1 CDS Cycma_1207 NC_015914.1 1424944 1426644 D PFAM: SusD family; InterPro IPR012944; KEGG: bhl:Bache_0096 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 1424944..1426644 Cyclobacterium marinum DSM 745 11037514 YP_004773211.1 CDS Cycma_1208 NC_015914.1 1426842 1427753 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cat:CA2559_00465 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator; AraC family transcriptional regulator complement(1426842..1427753) Cyclobacterium marinum DSM 745 11037515 YP_004773212.1 CDS Cycma_1209 NC_015914.1 1427755 1428267 R KEGG: cly:Celly_1706 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1427755..1428267) Cyclobacterium marinum DSM 745 11037516 YP_004773213.1 CDS Cycma_1210 NC_015914.1 1428842 1429177 D PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mtt:Ftrac_2633 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; regulatory protein ArsR 1428842..1429177 Cyclobacterium marinum DSM 745 11037517 YP_004773214.1 CDS Cycma_1211 NC_015914.1 1429299 1430078 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; InterPro IPR017867; KEGG: rba:RB11147 arsenate reductase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Probable arsenate reductase; protein-tyrosine-phosphatase 1429299..1430078 Cyclobacterium marinum DSM 745 11037518 YP_004773215.1 CDS Cycma_1212 NC_015914.1 1430084 1431430 D PFAM: Cytochrome C biogenesis protein transmembrane region; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834; KEGG: lbf:LBF_3183 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR: Thiol:disulfide interchange protein DsbD (Precursor); cytochrome c biogenesis protein transmembrane region 1430084..1431430 Cyclobacterium marinum DSM 745 11037519 YP_004773216.1 CDS Cycma_1213 NC_015914.1 1431573 1432628 D PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: cly:Celly_0109 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; arsenical-resistance protein 1431573..1432628 Cyclobacterium marinum DSM 745 11037520 YP_004773217.1 CDS Cycma_1214 NC_015914.1 1432625 1433353 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; InterPro IPR004843; KEGG: metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase 1432625..1433353 Cyclobacterium marinum DSM 745 11037521 YP_004773218.1 CDS Cycma_1215 NC_015914.1 1433368 1434816 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_2652 N-acetylgalactosamine 6-sulfatase (GALNS); PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfatase (GALNS); sulfatase complement(1433368..1434816) Cyclobacterium marinum DSM 745 11037522 YP_004773219.1 CDS Cycma_1216 NC_015914.1 1435089 1436897 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG5616 integral membrane protein; InterPro IPR000005:IPR019734:IPR018060; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Adenylate cyclase; Cya3; AraC family transcriptional regulator 1435089..1436897 Cyclobacterium marinum DSM 745 11037523 YP_004773220.1 CDS Cycma_1217 NC_015914.1 1437026 1438009 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: quinone oxidoreductase; alcohol dehydrogenase 1437026..1438009 Cyclobacterium marinum DSM 745 11037524 YP_004773221.1 CDS Cycma_1218 NC_015914.1 1438041 1438982 D InterPro IPR001611; KEGG: fbc:FB2170_11006 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: uncharacterized protein; hypothetical protein 1438041..1438982 Cyclobacterium marinum DSM 745 11037525 YP_004773222.1 CDS Cycma_1219 NC_015914.1 1439382 1439840 D KEGG: zpr:ZPR_2890 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1439382..1439840 Cyclobacterium marinum DSM 745 11037526 YP_004773223.1 CDS Cycma_1220 NC_015914.1 1440468 1441292 D PFAM: Domain of unknown function (DUF1919); COGs: COG3955 Exopolysaccharide biosynthesis protein; InterPro IPR015037; KEGG: snp:SPAP_0382 acetyl transferase; PFAM: Protein of unknown function DUF1919; SPTR: acetyl transferase; hypothetical protein 1440468..1441292 Cyclobacterium marinum DSM 745 11037527 YP_004773224.1 CDS Cycma_1221 NC_015914.1 1441363 1442448 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; PFAM: Lipase, GDSL; SPTR: Ester hydrolase; G-D-S-L family lipolytic protein 1441363..1442448 Cyclobacterium marinum DSM 745 11037528 YP_004773225.1 CDS Cycma_1222 NC_015914.1 1442499 1442927 D KEGG: gbe:GbCGDNIH1_1154 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1442499..1442927 Cyclobacterium marinum DSM 745 11037529 YP_004773226.1 CDS Cycma_1223 NC_015914.1 1443083 1443706 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein TetR; TetR family transcriptional regulator 1443083..1443706 Cyclobacterium marinum DSM 745 11037530 YP_004773227.1 CDS Cycma_1224 NC_015914.1 1443712 1444713 D PFAM: Zinc-binding dehydrogenase; COGs: COG2130 NADP-dependent oxidoreductase; InterPro IPR013149; KEGG: mtt:Ftrac_2344 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; SPTR: YfmJ; alcohol dehydrogenase 1443712..1444713 Cyclobacterium marinum DSM 745 11037531 YP_004773228.1 CDS Cycma_1225 NC_015914.1 1445011 1445763 D PFAM: Protein of unknown function (DUF1275); COGs: COG3619 membrane protein; InterPro IPR010699; KEGG: zpr:ZPR_1420 hypothetical protein; PFAM: Protein of unknown function DUF1275; SPTR: Hypothetical membrane protein; hypothetical protein 1445011..1445763 Cyclobacterium marinum DSM 745 11037532 YP_004773229.1 CDS Cycma_1226 NC_015914.1 1446132 1446737 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cao:Celal_2699 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Possible Transcriptional Regulator, TetR family protein; TetR family transcriptional regulator 1446132..1446737 Cyclobacterium marinum DSM 745 11037533 YP_004773230.1 CDS Cycma_1227 NC_015914.1 1446811 1447545 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cao:Celal_0068 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1446811..1447545 Cyclobacterium marinum DSM 745 11037534 YP_004773231.1 CDS Cycma_1228 NC_015914.1 1447563 1448366 D KEGG: cao:Celal_3915 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1447563..1448366 Cyclobacterium marinum DSM 745 11037535 YP_004773232.1 CDS Cycma_1229 NC_015914.1 1448573 1449949 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: phe:Phep_2825 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase complement(1448573..1449949) Cyclobacterium marinum DSM 745 11037536 YP_004773233.1 CDS Cycma_1230 NC_015914.1 1450378 1452681 R PFAM: esterase; InterPro IPR000801; KEGG: dfe:Dfer_1714 esterase; PFAM: esterase; SPTR: esterase; esterase complement(1450378..1452681) Cyclobacterium marinum DSM 745 11037537 YP_004773234.1 CDS Cycma_1231 NC_015914.1 1452715 1454163 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: rba:RB7871 signal peptide; SPTR: uncharacterized protein; hypothetical protein complement(1452715..1454163) Cyclobacterium marinum DSM 745 11037538 YP_004773235.1 CDS Cycma_1232 NC_015914.1 1454176 1455033 R PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: psn:Pedsa_1796 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein complement(1454176..1455033) Cyclobacterium marinum DSM 745 11037539 YP_004773236.1 CDS Cycma_1233 NC_015914.1 1455090 1456802 R PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_2666 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein complement(1455090..1456802) Cyclobacterium marinum DSM 745 11037540 YP_004773237.1 CDS Cycma_1234 NC_015914.1 1456829 1460395 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: psn:Pedsa_2665 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(1456829..1460395) Cyclobacterium marinum DSM 745 11037541 YP_004773238.1 CDS Cycma_1235 NC_015914.1 1460512 1461588 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2895 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR complement(1460512..1461588) Cyclobacterium marinum DSM 745 11037542 YP_004773239.1 CDS Cycma_1236 NC_015914.1 1461705 1462301 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: sli:Slin_0419 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1461705..1462301) Cyclobacterium marinum DSM 745 11037543 YP_004773240.1 CDS Cycma_1237 NC_015914.1 1462624 1463679 R PFAM: Prenyltransferase and squalene oxidase repeat; InterPro IPR001330; PFAM: Prenyltransferase/squalene oxidase; prenyltransferase/squalene oxidase complement(1462624..1463679) Cyclobacterium marinum DSM 745 11037544 YP_004773241.1 CDS Cycma_1238 NC_015914.1 1463915 1464733 R KEGG: fjo:Fjoh_1613 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1463915..1464733) Cyclobacterium marinum DSM 745 11037545 YP_004773242.1 CDS Cycma_1239 NC_015914.1 1464758 1465459 R KEGG: dfe:Dfer_3240 hypothetical protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence containing protein; hypothetical protein complement(1464758..1465459) Cyclobacterium marinum DSM 745 11037546 YP_004773243.1 CDS Cycma_1240 NC_015914.1 1465751 1467316 R SPTR: uncharacterized protein; hypothetical protein complement(1465751..1467316) Cyclobacterium marinum DSM 745 11037547 YP_004773244.1 CDS Cycma_1241 NC_015914.1 1467352 1467987 R PFAM: Bacterial transcription activator, effector binding domain; Uncharacterized conserved protein (DUF2174); COGs: COG4832 conserved hypothetical protein; InterPro IPR019233; KEGG: swd:Swoo_2851 hypothetical protein; PFAM: Protein of unknown function DUF2174, N-terminal; SPTR: uncharacterized protein; hypothetical protein complement(1467352..1467987) Cyclobacterium marinum DSM 745 11037548 YP_004773245.1 CDS Cycma_1242 NC_015914.1 1468207 1468839 R PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cao:Celal_4085 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; nitroreductase complement(1468207..1468839) Cyclobacterium marinum DSM 745 11037549 YP_004773246.1 CDS Cycma_1243 NC_015914.1 1468851 1469315 R PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: gfo:GFO_1928 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Organic hydroperoxide resistance transcriptional regulator, MarR family protein; MarR family transcriptional regulator complement(1468851..1469315) Cyclobacterium marinum DSM 745 11037550 YP_004773247.1 CDS Cycma_1244 NC_015914.1 1469312 1469740 R PFAM: DoxX; KEGG: cao:Celal_3087 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1469312..1469740) Cyclobacterium marinum DSM 745 11037551 YP_004773248.1 CDS Cycma_1245 NC_015914.1 1469856 1470527 R PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: cly:Celly_2854 electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: uncharacterized protein; electron transport protein SCO1/SenC complement(1469856..1470527) Cyclobacterium marinum DSM 745 11037552 YP_004773249.1 CDS Cycma_1246 NC_015914.1 1470520 1471122 R PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: cly:Celly_2853 MORN variant repeat-containing protein; PFAM: MORN variant; SPTR: MORN variant repeat-containing protein; MORN repeat-containing protein complement(1470520..1471122) Cyclobacterium marinum DSM 745 11037553 YP_004773250.1 CDS Cycma_1247 NC_015914.1 1471109 1471924 R KEGG: cly:Celly_2852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1471109..1471924) Cyclobacterium marinum DSM 745 11037554 YP_004773251.1 CDS Cycma_1248 NC_015914.1 1471962 1472441 R KEGG: mtt:Ftrac_1241 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1471962..1472441) Cyclobacterium marinum DSM 745 11037555 YP_004773252.1 CDS Cycma_1249 NC_015914.1 1472441 1472722 R KEGG: mtt:Ftrac_1242 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1472441..1472722) Cyclobacterium marinum DSM 745 11037556 YP_004773253.1 CDS Cycma_1250 NC_015914.1 1472725 1473345 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_1243 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1472725..1473345) Cyclobacterium marinum DSM 745 11037557 YP_004773254.1 CDS Cycma_1251 NC_015914.1 1473407 1474435 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: mci:Mesci_5287 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(1473407..1474435) Cyclobacterium marinum DSM 745 11037558 YP_004773255.1 CDS Cycma_1252 NC_015914.1 1474511 1475431 R KEGG: psl:Psta_0944 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1474511..1475431) Cyclobacterium marinum DSM 745 11037559 YP_004773256.1 CDS Cycma_1253 NC_015914.1 1475511 1476218 R PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: zpr:ZPR_4290 divalent heavy-metal cations transporter; PFAM: Zinc/iron permease; SPTR: Predicted divalent heavy-metal cations transporter; zinc/iron permease complement(1475511..1476218) Cyclobacterium marinum DSM 745 11037560 YP_004773257.1 CDS Cycma_1254 NC_015914.1 1476372 1477460 R PFAM: Malate/L-lactate dehydrogenase; COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: psn:Pedsa_2198 malate dehydrogenase (NAD); PFAM: Malate/L-lactate dehydrogenase; SPTR: Malate dehydrogenase (NAD); malate/L-lactate dehydrogenase complement(1476372..1477460) Cyclobacterium marinum DSM 745 11037561 YP_004773258.1 CDS Cycma_1255 NC_015914.1 1477631 1478260 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: sli:Slin_1177 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein complement(1477631..1478260) Cyclobacterium marinum DSM 745 11037562 YP_004773259.1 CDS Cycma_1256 NC_015914.1 1478551 1478934 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; KEGG: mtt:Ftrac_2758 transcriptional regulator, TraR/DksA family; SPTR: RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 1478551..1478934 Cyclobacterium marinum DSM 745 11037563 YP_004773260.1 CDS Cycma_1257 NC_015914.1 1478937 1479497 D PFAM: transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: mtt:Ftrac_2757 condensin subunit scpb; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; SPTR: Condensin subunit ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; chromosome segregation and condensation protein ScpB 1478937..1479497 Cyclobacterium marinum DSM 745 11037564 YP_004773261.1 CDS Cycma_1258 NC_015914.1 1479629 1480672 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: dfe:Dfer_3919 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; pseudouridine synthase 1479629..1480672 Cyclobacterium marinum DSM 745 11037565 YP_004773262.1 CDS Cycma_1259 NC_015914.1 1480733 1481014 D PFAM: Domain of unknown function (DUF427); COGs: COG2343 conserved hypothetical protein; InterPro IPR007361; KEGG: cat:CA2559_13333 hypothetical protein; PFAM: Protein of unknown function DUF427; SPTR: uncharacterized protein; hypothetical protein 1480733..1481014 Cyclobacterium marinum DSM 745 11037566 YP_004773263.1 CDS Cycma_1260 NC_015914.1 1481021 1482403 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: shg:Sph21_2569 dihydrolipoyl dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Mercuric reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1481021..1482403 Cyclobacterium marinum DSM 745 11037567 YP_004773264.1 CDS Cycma_1261 NC_015914.1 1483302 1483700 R PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: cao:Celal_3929 globin family protein; SPTR: Globin family protein; globin family protein complement(1483302..1483700) Cyclobacterium marinum DSM 745 11037568 YP_004773265.1 CDS Cycma_1262 NC_015914.1 1483707 1484054 R KEGG: gfo:GFO_1389 RmlC-like cupin family protein; SPTR: RmlC-like cupin family protein; RmlC-like cupin family protein complement(1483707..1484054) Cyclobacterium marinum DSM 745 11037569 YP_004773266.1 CDS Cycma_1263 NC_015914.1 1485136 1486602 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314:IPR004154:IPR002315; KEGG: mtt:Ftrac_2543 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; glycyl-tRNA synthetase complement(1485136..1486602) Cyclobacterium marinum DSM 745 11037570 YP_004773267.1 CDS Cycma_1265 NC_015914.1 1489484 1490347 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_5488 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(1489484..1490347) Cyclobacterium marinum DSM 745 11037572 YP_004773268.1 CDS Cycma_1266 NC_015914.1 1490349 1492061 R PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: sli:Slin_5485 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I; cytochrome c class I complement(1490349..1492061) Cyclobacterium marinum DSM 745 11037573 YP_004773269.1 CDS Cycma_1267 NC_015914.1 1492267 1493847 R PFAM: SusD family; InterPro IPR012944; KEGG: cly:Celly_2444 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain-containing protein; RagB/SusD domain-containing protein complement(1492267..1493847) Cyclobacterium marinum DSM 745 11037574 YP_004773270.1 CDS Cycma_1268 NC_015914.1 1493866 1496934 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cly:Celly_2443 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor complement(1493866..1496934) Cyclobacterium marinum DSM 745 11037575 YP_004773271.1 CDS Cycma_1269 NC_015914.1 1497433 1499859 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 1497433..1499859 Cyclobacterium marinum DSM 745 11037576 YP_004773272.1 CDS Cycma_1270 NC_015914.1 1499965 1500567 R PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019; KEGG: mtt:Ftrac_2148 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; SPTR: DNA-3-methyladenine glycosylase I; methyladenine glycosylase complement(1499965..1500567) Cyclobacterium marinum DSM 745 11037577 YP_004773273.1 CDS Cycma_1271 NC_015914.1 1500741 1501406 R PFAM: Protein of unknown function (DUF3365); KEGG: mtt:Ftrac_2403 hypothetical protein; SPTR: Cytochrome c; hypothetical protein complement(1500741..1501406) Cyclobacterium marinum DSM 745 11037578 YP_004773274.1 CDS Cycma_1272 NC_015914.1 1501640 1502716 D PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR005139:IPR000352:IPR004373; KEGG: mtt:Ftrac_2406 bacterial peptide chain release factor 1 (brf-1); PFAM: Class I peptide chain release factor; Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; peptide chain release factor 1 1501640..1502716 Cyclobacterium marinum DSM 745 11037579 YP_004773275.1 CDS Cycma_1273 NC_015914.1 1502841 1505651 R COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: hau:Haur_2022 hypothetical protein; SPTR: glycosyl hydrolase, BNR protein; hypothetical protein complement(1502841..1505651) Cyclobacterium marinum DSM 745 11037580 YP_004773276.1 CDS Cycma_1274 NC_015914.1 1505839 1507083 R PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR019868; KEGG: sli:Slin_5515 gliding motility-associated lipoprotein GldJ; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldJ; TIGRFAM: Gliding motility-associated lipoprotein GldJ-short; gliding motility-associated lipoprotein GldJ complement(1505839..1507083) Cyclobacterium marinum DSM 745 11037581 YP_004773277.1 CDS Cycma_1275 NC_015914.1 1507345 1510689 R PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 004576:IPR014001; KEGG: mtt:Ftrac_2144 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; transcription-repair coupling factor complement(1507345..1510689) Cyclobacterium marinum DSM 745 11037582 YP_004773278.1 CDS Cycma_1276 NC_015914.1 1511024 1511644 D PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; KEGG: mtt:Ftrac_2146 cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1511024..1511644 Cyclobacterium marinum DSM 745 11037583 YP_004773279.1 CDS Cycma_1277 NC_015914.1 1511868 1512845 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010201; KEGG: mtt:Ftrac_0676 protease FtsH subunit HflK; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflK protein; TIGRFAM: HflK; HflK protein 1511868..1512845 Cyclobacterium marinum DSM 745 11037584 YP_004773280.1 CDS Cycma_1278 NC_015914.1 1512882 1513820 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010200; KEGG: mtt:Ftrac_0675 protease FtsH subunit HflC; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflC protein; TIGRFAM: HflC; HflC protein 1512882..1513820 Cyclobacterium marinum DSM 745 11037585 YP_004773281.1 CDS Cycma_1279 NC_015914.1 1513839 1514282 D KEGG: mtt:Ftrac_1836 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1513839..1514282 Cyclobacterium marinum DSM 745 11037586 YP_004773282.1 CDS Cycma_1280 NC_015914.1 1514329 1514799 R PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: mtt:Ftrac_1613 ferric uptake regulator, fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein Fur; Fur family ferric uptake regulator complement(1514329..1514799) Cyclobacterium marinum DSM 745 11037587 YP_004773283.1 CDS Cycma_1281 NC_015914.1 1515161 1516420 D InterPro IPR001478; KEGG: mtt:Ftrac_1416 pdz/dhr/glgf domain protein; SMART: PDZ/DHR/GLGF; SPTR: uncharacterized protein; PDZ/DHR/GLGF domain-containing protein 1515161..1516420 Cyclobacterium marinum DSM 745 11037588 YP_004773284.1 CDS Cycma_1282 NC_015914.1 1516561 1519545 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655:IPR003594; KEGG: fjo:Fjoh_4936 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; SMART: ATP-binding region, ATPase-like; SPTR: Multi-sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 1516561..1519545 Cyclobacterium marinum DSM 745 11037589 YP_004773285.1 CDS Cycma_1283 NC_015914.1 1519585 1520316 R PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; HAMAP: Glucosamine-6-phosphate deaminase; InterPro IPR006148:IPR018322; KEGG: acl:ACL_0284 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine-6-phosphate deaminase; TIGRFAM: Glucosamine-6-phosphate isomerase, subgroup; glucosamine-6-phosphate deaminase complement(1519585..1520316) Cyclobacterium marinum DSM 745 11033709 YP_004773286.1 CDS Cycma_1284 NC_015914.1 1520412 1521014 R PFAM: UPF0126 domain; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: dfe:Dfer_5003 protein of unknown function UPF0126; PFAM: Uncharacterised protein family UPF0126; SPTR: YadS protein; hypothetical protein complement(1520412..1521014) Cyclobacterium marinum DSM 745 11033710 YP_004773287.1 CDS Cycma_1285 NC_015914.1 1521023 1521652 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: cpi:Cpin_4275 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: UbiE/COQ5 methyltransferase; type 11 methyltransferase complement(1521023..1521652) Cyclobacterium marinum DSM 745 11033711 YP_004773288.1 CDS Cycma_1286 NC_015914.1 1522284 1524701 R PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug complement(1522284..1524701) Cyclobacterium marinum DSM 745 11033712 YP_004773289.1 CDS Cycma_1287 NC_015914.1 1524745 1525455 R PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: sur:STAUR_6754 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: CrtW; fatty acid desaturase complement(1524745..1525455) Cyclobacterium marinum DSM 745 11033713 YP_004773290.1 CDS Cycma_1288 NC_015914.1 1525484 1526329 R PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: mtt:Ftrac_1470 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1; TIGRFAM: LytB protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1525484..1526329) Cyclobacterium marinum DSM 745 11033714 YP_004773291.1 CDS Cycma_1289 NC_015914.1 1526499 1527344 R PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: sli:Slin_5959 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; SPTR: Phytoene synthase; squalene/phytoene synthase complement(1526499..1527344) Cyclobacterium marinum DSM 745 11033715 YP_004773292.1 CDS Cycma_1290 NC_015914.1 1527374 1528849 R PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937:IPR014105; KEGG: mtt:Ftrac_1472 phytoene desaturase; PFAM: Amine oxidase; SPTR: CrtI; TIGRFAM: Zeta-phytoene desaturase; phytoene desaturase complement(1527374..1528849) Cyclobacterium marinum DSM 745 11033716 YP_004773293.1 CDS Cycma_1291 NC_015914.1 1528854 1529366 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_1473 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ORF1; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1528854..1529366) Cyclobacterium marinum DSM 745 11033717 YP_004773294.1 CDS Cycma_1292 NC_015914.1 1529592 1530662 R PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: shg:Sph21_2875 peptidase M19 renal dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Membrane dipeptidase; peptidase M19 complement(1529592..1530662) Cyclobacterium marinum DSM 745 11033718 YP_004773295.1 CDS Cycma_1293 NC_015914.1 1530698 1531810 R PFAM: Alanine racemase, N-terminal domain; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: sli:Slin_1233 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: Alanine racemase domain protein; alanine racemase complement(1530698..1531810) Cyclobacterium marinum DSM 745 11033719 YP_004773296.1 CDS Cycma_1294 NC_015914.1 1531818 1532282 R PFAM: Endoribonuclease L-PSP; COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: lby:Lbys_3494 endoribonuclease L-psp; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(1531818..1532282) Cyclobacterium marinum DSM 745 11033720 YP_004773297.1 CDS Cycma_1295 NC_015914.1 1532296 1533621 R PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: pdi:BDI_1331 H+/gluconate symporter and related permease; PFAM: Gluconate transporter; SPTR: Gluconate transporter, permease; TIGRFAM: Gluconate transporter; gluconate transporter complement(1532296..1533621) Cyclobacterium marinum DSM 745 11033721 YP_004773298.1 CDS Cycma_1296 NC_015914.1 1533731 1534900 R PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mtt:Ftrac_2293 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; major facilitator superfamily protein complement(1533731..1534900) Cyclobacterium marinum DSM 745 11033722 YP_004773299.1 CDS Cycma_1297 NC_015914.1 1534946 1536283 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4057 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfate sulfatase; sulfatase complement(1534946..1536283) Cyclobacterium marinum DSM 745 11033723 YP_004773300.1 CDS Cycma_1298 NC_015914.1 1536637 1537209 R KEGG: cly:Celly_2894 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1536637..1537209) Cyclobacterium marinum DSM 745 11033724 YP_004773301.1 CDS Cycma_1299 NC_015914.1 1537622 1539976 R SPTR: uncharacterized protein; hypothetical protein complement(1537622..1539976) Cyclobacterium marinum DSM 745 11033725 YP_004773302.1 CDS Cycma_1300 NC_015914.1 1540196 1541416 D KEGG: fbc:FB2170_00570 hypothetical protein; SPTR: Membrane protein; hypothetical protein 1540196..1541416 Cyclobacterium marinum DSM 745 11033726 YP_004773303.1 CDS Cycma_1301 NC_015914.1 1541474 1543510 D PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR006935:IPR001650:IPR001943:IPR004807:IPR 014001; KEGG: mtt:Ftrac_2586 excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; UvrABC system protein B 1541474..1543510 Cyclobacterium marinum DSM 745 11033727 YP_004773304.1 CDS Cycma_1302 NC_015914.1 1543511 1543951 D KEGG: mtt:Ftrac_2974 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1543511..1543951 Cyclobacterium marinum DSM 745 11033728 YP_004773305.1 CDS Cycma_1303 NC_015914.1 1543959 1544603 D PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: rmr:Rmar_1271 transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase; transcriptional regulator 1543959..1544603 Cyclobacterium marinum DSM 745 11033729 YP_004773306.1 CDS Cycma_1304 NC_015914.1 1544587 1545102 R PFAM: RecX family; COGs: COG2137 conserved hypothetical protein; HAMAP: Regulatory protein recX; InterPro IPR003783; KEGG: mtt:Ftrac_2438 regulatory protein RecX; PFAM: Regulatory protein RecX; SPTR: Regulatory protein recX; regulatory protein recX complement(1544587..1545102) Cyclobacterium marinum DSM 745 11033730 YP_004773307.1 CDS Cycma_1305 NC_015914.1 1545176 1545937 D PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: mtt:Ftrac_2600 triosephosphate isomerase; PFAM: Triosephosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; triosephosphate isomerase 1545176..1545937 Cyclobacterium marinum DSM 745 11033731 YP_004773308.1 CDS Cycma_1306 NC_015914.1 1546023 1546856 D PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; COGs: COG2264 Ribosomal protein L11 methylase; HAMAP: Ribosomal protein L11 methyltransferase; InterPro IPR010456; KEGG: sli:Slin_5617 ribosomal L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; SPTR: Ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 1546023..1546856 Cyclobacterium marinum DSM 745 11033732 YP_004773309.1 CDS Cycma_1307 NC_015914.1 1547074 1548423 R KEGG: sli:Slin_1885 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(1547074..1548423) Cyclobacterium marinum DSM 745 11033733 YP_004773310.1 CDS Cycma_1308 NC_015914.1 1548413 1549225 R PFAM: Starch synthase catalytic domain; COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: mtt:Ftrac_2051 glycogen synthase (udp-glucose); PFAM: Starch synthase catalytic region; SPTR: Glycogen synthase; starch synthase catalytic domain-containing protein complement(1548413..1549225) Cyclobacterium marinum DSM 745 11033734 YP_004773311.1 CDS Cycma_1309 NC_015914.1 1549317 1550210 D PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721; KEGG: lby:Lbys_3190 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; pantothenate synthetase 1549317..1550210 Cyclobacterium marinum DSM 745 11033735 YP_004773312.1 CDS Cycma_1310 NC_015914.1 1550219 1550566 D PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: chu:CHU_3834 aspartate alpha-decarboxylase; PFAM: Aspartate decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase; aspartate 1-decarboxylase 1550219..1550566 Cyclobacterium marinum DSM 745 11033736 YP_004773313.1 CDS Cycma_1311 NC_015914.1 1550563 1551552 D PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: mtt:Ftrac_2048 integral membrane protein; SPTR: integral membrane protein; hypothetical protein 1550563..1551552 Cyclobacterium marinum DSM 745 11033737 YP_004773314.1 CDS Cycma_1312 NC_015914.1 1551594 1552286 D PFAM: neutral zinc metallopeptidase; COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: mtt:Ftrac_2046 peptidase membrane zinc metallopeptidase; PFAM: Peptidase, membrane zinc metallopeptidase, SPTR: neutral zinc metallopeptidase; peptidase membrane zinc metallopeptidase 1551594..1552286 Cyclobacterium marinum DSM 745 11033738 YP_004773315.1 CDS Cycma_1313 NC_015914.1 1552572 1553711 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: cat:CA2559_06620 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 1552572..1553711 Cyclobacterium marinum DSM 745 11033739 YP_004773316.1 CDS Cycma_1314 NC_015914.1 1553853 1554782 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005:IPR018060; KEGG: chu:CHU_3826 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 1553853..1554782 Cyclobacterium marinum DSM 745 11033740 YP_004773317.1 CDS Cycma_1315 NC_015914.1 1554765 1555550 R PFAM: PcrB family; TIGRFAM: phosphoglycerol geranylgeranyltransferase; geranylgeranylglyceryl phosphate synthase; COGs: COG1646 phosphate-binding protein with TIM-barrel fold; HAMAP: Geranylgeranylglyceryl phosphate synthase; InterPro IPR008205:IPR010946; KEGG: mtt:Ftrac_2043 geranylgeranylglyceryl phosphate synthase; PFAM: Geranylgeranylglyceryl phosphate synthase-like; SPTR: Geranylgeranylglyceryl phosphate synthase; TIGRFAM: Geranylgeranylglyceryl phosphate synthase; Geranylgeranylglyceryl phosphate synthase-like; geranylgeranylglyceryl phosphate synthase complement(1554765..1555550) Cyclobacterium marinum DSM 745 11033741 YP_004773318.1 CDS Cycma_1316 NC_015914.1 1555531 1555857 R SPTR: uncharacterized protein; hypothetical protein complement(1555531..1555857) Cyclobacterium marinum DSM 745 11033742 YP_004773319.1 CDS Cycma_1317 NC_015914.1 1555854 1556198 R PFAM: Protein of unknown function (DUF1469); KEGG: mtt:Ftrac_2041 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1555854..1556198) Cyclobacterium marinum DSM 745 11033743 YP_004773320.1 CDS Cycma_1318 NC_015914.1 1556459 1557130 D PFAM: DSBA-like thioredoxin domain; COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: sli:Slin_1488 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: Dithiol-disulfide isomerase; DSBA oxidoreductase 1556459..1557130 Cyclobacterium marinum DSM 745 11033744 YP_004773321.1 CDS Cycma_1319 NC_015914.1 1557280 1558752 D PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937:IPR014105; KEGG: mtt:Ftrac_1976 phytoene desaturase; PFAM: Amine oxidase; SPTR: phytoene dehydrogenase; TIGRFAM: Zeta-phytoene desaturase; phytoene desaturase 1557280..1558752 Cyclobacterium marinum DSM 745 11033745 YP_004773322.1 CDS Cycma_1320 NC_015914.1 1558749 1560149 R PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638:IPR008258; KEGG: mtt:Ftrac_1791 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein, family 3; lytic transglycosylase complement(1558749..1560149) Cyclobacterium marinum DSM 745 11033746 YP_004773323.1 CDS Cycma_1321 NC_015914.1 1560249 1561580 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_1899 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane efflux protein; manually curated; outer membrane efflux protein complement(1560249..1561580) Cyclobacterium marinum DSM 745 11033747 YP_004773324.1 CDS Cycma_1322 NC_015914.1 1561582 1564644 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_1898 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(1561582..1564644) Cyclobacterium marinum DSM 745 11033748 YP_004773325.1 CDS Cycma_1323 NC_015914.1 1564654 1565730 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_1897 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: Cation or acridine efflux membrane fusion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1564654..1565730) Cyclobacterium marinum DSM 745 11033749 YP_004773326.1 CDS Cycma_1324 NC_015914.1 1566114 1569512 R KEGG: shg:Sph21_3438 OmpA-related protein; SPTR: OmpA-related protein; OmpA-like protein complement(1566114..1569512) Cyclobacterium marinum DSM 745 11033750 YP_004773327.1 CDS Cycma_1325 NC_015914.1 1570104 1570805 D PFAM: YhhN-like protein; COGs: COG3714 membrane protein; InterPro IPR012506; KEGG: fbc:FB2170_10414 hypothetical protein; PFAM: YhhN-like; SPTR: Membrane protein; hypothetical protein 1570104..1570805 Cyclobacterium marinum DSM 745 11033751 YP_004773328.1 CDS Cycma_1326 NC_015914.1 1570812 1572566 R PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004365:IPR004364:IPR004115:IPR004524; KEGG: mtt:Ftrac_2962 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; aspartyl-tRNA synthetase complement(1570812..1572566) Cyclobacterium marinum DSM 745 11033752 YP_004773329.1 CDS Cycma_1327 NC_015914.1 1572804 1574072 D PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_1904 peptidase M23; PFAM: Peptidase M23; SPTR: M23 peptidase domain protein; peptidase M23 1572804..1574072 Cyclobacterium marinum DSM 745 11033753 YP_004773330.1 CDS Cycma_1328 NC_015914.1 1574195 1575307 D COGs: COG0438 Glycosyltransferase; KEGG: group 1 glycosyl transferase; SPTR: uncharacterized protein; hypothetical protein 1574195..1575307 Cyclobacterium marinum DSM 745 11033754 YP_004773331.1 CDS Cycma_1329 NC_015914.1 1575361 1576143 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835:IPR013446; KEGG: cag:Cagg_2148 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate cytidylyltransferase; TIGRFAM: Glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 1575361..1576143 Cyclobacterium marinum DSM 745 11033755 YP_004773332.1 CDS Cycma_1330 NC_015914.1 1576168 1577226 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: oca:OCAR_4620 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1576168..1577226 Cyclobacterium marinum DSM 745 11033756 YP_004773333.1 CDS Cycma_1331 NC_015914.1 1577289 1578584 R PFAM: SAF domain; Shikimate / quinate 5-dehydrogenase; COGs: COG4091 homoserine dehydrogenase; InterPro IPR013974; KEGG: ana:alr2831 hypothetical protein; PFAM: SAF domain; SPTR: Alr2831 protein; SAF domain-containing protein complement(1577289..1578584) Cyclobacterium marinum DSM 745 11033757 YP_004773334.1 CDS Cycma_1332 NC_015914.1 1578581 1579120 R PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: cyn:Cyan7425_5190 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(1578581..1579120) Cyclobacterium marinum DSM 745 11033758 YP_004773335.1 CDS Cycma_1333 NC_015914.1 1579263 1580627 D PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR001509; KEGG: fma:FMG_1137 capsular polysaccharide biosynthesis protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; NAD-dependent epimerase/dehydratase 1579263..1580627 Cyclobacterium marinum DSM 745 11033759 YP_004773336.1 CDS Cycma_1334 NC_015914.1 1580676 1581095 D PFAM: Mov34/MPN/PAD-1 family; InterPro IPR000555; KEGG: hya:HY04AAS1_1236 Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 1580676..1581095 Cyclobacterium marinum DSM 745 11033760 YP_004773337.1 CDS Cycma_1335 NC_015914.1 1581102 1582520 D PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR003749:IPR000594:IPR007901:IPR001763; KEGG: svo:SVI_1923 molybdenum cofactor biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; ThiamineS; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; SPTR: Molybdopterin biosynthesis protein; UBA/THIF-type NAD/FAD binding protein 1581102..1582520 Cyclobacterium marinum DSM 745 11033761 YP_004773338.1 CDS Cycma_1336 NC_015914.1 1582699 1585068 R PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: psn:Pedsa_0181 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA family protein; OmpA/MotB domain-containing protein complement(1582699..1585068) Cyclobacterium marinum DSM 745 11033762 YP_004773339.1 CDS Cycma_1337 NC_015914.1 1585059 1586033 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_5273 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(1585059..1586033) Cyclobacterium marinum DSM 745 11033763 YP_004773340.1 CDS Cycma_1338 NC_015914.1 1586074 1589016 R PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: fjo:Fjoh_1645 hypothetical protein; PFAM: Protein of unknown function DUF11; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF11; hypothetical protein complement(1586074..1589016) Cyclobacterium marinum DSM 745 11033764 YP_004773341.1 CDS Cycma_1339 NC_015914.1 1589279 1590763 R KEGG: cts:Ctha_0375 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1589279..1590763) Cyclobacterium marinum DSM 745 11033765 YP_004773342.1 CDS Cycma_1340 NC_015914.1 1590794 1591255 R hypothetical protein complement(1590794..1591255) Cyclobacterium marinum DSM 745 11033766 YP_004773343.1 CDS Cycma_1341 NC_015914.1 1591758 1592348 D PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: wvi:Weevi_0183 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; SPTR: Superoxide dismutase; manganese/iron superoxide dismutase 1591758..1592348 Cyclobacterium marinum DSM 745 11033767 YP_004773344.1 CDS Cycma_1342 NC_015914.1 1592345 1592803 D KEGG: wvi:Weevi_0184 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1592345..1592803 Cyclobacterium marinum DSM 745 11033768 YP_004773345.1 CDS Cycma_1343 NC_015914.1 1592807 1593250 D KEGG: zpr:ZPR_0959 hydrolase-like protein; SPTR: uncharacterized protein; hypothetical protein 1592807..1593250 Cyclobacterium marinum DSM 745 11033769 YP_004773346.1 CDS Cycma_1344 NC_015914.1 1593383 1593856 R KEGG: mtt:Ftrac_0101 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1593383..1593856) Cyclobacterium marinum DSM 745 11033770 YP_004773347.1 CDS Cycma_1345 NC_015914.1 1593873 1594457 R PFAM: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: coc:Coch_1800 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(1593873..1594457) Cyclobacterium marinum DSM 745 11033771 YP_004773348.1 CDS Cycma_1346 NC_015914.1 1594417 1596012 R PFAM: Uncharacterized protein conserved in bacteria (DUF2317); TIGRFAM: bacillithiol biosynthesis cysteine-adding enzyme BshC; COGs: COG4365 conserved hypothetical protein; HAMAP: UPF0747 protein; InterPro IPR011199; KEGG: lby:Lbys_2704 hypothetical protein; PFAM: Uncharacterised conserved protein UCP012535; SPTR: UPF0747 protein ALPR1_04120; hypothetical protein complement(1594417..1596012) Cyclobacterium marinum DSM 745 11033772 YP_004773349.1 CDS Cycma_1347 NC_015914.1 1596390 1598588 D PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: shg:Sph21_0281 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; copper-translocating P-type ATPase 1596390..1598588 Cyclobacterium marinum DSM 745 11033773 YP_004773350.1 CDS Cycma_1348 NC_015914.1 1598679 1598885 D KEGG: sli:Slin_6874 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1598679..1598885 Cyclobacterium marinum DSM 745 11033774 YP_004773351.1 CDS Cycma_1349 NC_015914.1 1598936 1600198 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_2816 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase, M16 (Pitrilysin) family; peptidase M16 domain-containing protein 1598936..1600198 Cyclobacterium marinum DSM 745 11033775 YP_004773352.1 CDS Cycma_1350 NC_015914.1 1600210 1600689 D PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; InterPro IPR003526; KEGG: mtt:Ftrac_2817 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1600210..1600689 Cyclobacterium marinum DSM 745 11033776 YP_004773353.1 CDS Cycma_1351 NC_015914.1 1600701 1601390 D PFAM: Protein of unknown function (DUF752); COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: mtt:Ftrac_2818 hypothetical protein; PFAM: Protein of unknown function DUF752; SPTR: methyltransferase; hypothetical protein 1600701..1601390 Cyclobacterium marinum DSM 745 11033777 YP_004773354.1 CDS Cycma_1352 NC_015914.1 1601375 1601923 D hypothetical protein 1601375..1601923 Cyclobacterium marinum DSM 745 11033778 YP_004773355.1 CDS Cycma_1353 NC_015914.1 1602335 1603540 D PFAM: FG-GAP repeat; KEGG: msv:Mesil_0837 FG-GAP repeat protein; SPTR: FG-GAP repeat protein; hypothetical protein 1602335..1603540 Cyclobacterium marinum DSM 745 11033779 YP_004773356.1 CDS Cycma_1354 NC_015914.1 1603557 1604453 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1603557..1604453 Cyclobacterium marinum DSM 745 11033780 YP_004773357.1 CDS Cycma_1355 NC_015914.1 1604502 1605500 R PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: mtt:Ftrac_3281 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: Kinase, PfkB family; PfkB domain-containing protein complement(1604502..1605500) Cyclobacterium marinum DSM 745 11033781 YP_004773358.1 CDS Cycma_1356 NC_015914.1 1605564 1605941 R KEGG: sli:Slin_3024 hypothetical protein; SPTR: Transmembrane protein; hypothetical protein complement(1605564..1605941) Cyclobacterium marinum DSM 745 11033782 YP_004773359.1 CDS Cycma_1357 NC_015914.1 1605978 1607351 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: cyt:cce_4457 hypothetical protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(1605978..1607351) Cyclobacterium marinum DSM 745 11033783 YP_004773360.1 CDS Cycma_1358 NC_015914.1 1607348 1608556 R KEGG: cpi:Cpin_7261 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1607348..1608556) Cyclobacterium marinum DSM 745 11033784 YP_004773361.1 CDS Cycma_1359 NC_015914.1 1608597 1609757 R PFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: sli:Slin_0084 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; SPTR: 3-dehydroquinate synthase domain protein; 3-dehydroquinate synthase complement(1608597..1609757) Cyclobacterium marinum DSM 745 11033785 YP_004773362.1 CDS Cycma_1360 NC_015914.1 1609827 1610726 R PFAM: UbiA prenyltransferase; InterPro IPR000537; KEGG: cyc:PCC7424_2286 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Prenyltransferase, UbiA family; UbiA prenyltransferase complement(1609827..1610726) Cyclobacterium marinum DSM 745 11033786 YP_004773363.1 CDS Cycma_1361 NC_015914.1 1610735 1611646 R PFAM: TatD related DNase; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130; KEGG: cyt:cce_4838 TatD DNase-like metal-dependent hydrolase; PFAM: Deoxyribonuclease, TatD-related; SPTR: Hydrolase, TatD family; TatD-related deoxyribonuclease complement(1610735..1611646) Cyclobacterium marinum DSM 745 11033787 YP_004773364.1 CDS Cycma_1362 NC_015914.1 1611751 1612638 R KEGG: cyt:cce_4452 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1611751..1612638) Cyclobacterium marinum DSM 745 11033788 YP_004773365.1 CDS Cycma_1363 NC_015914.1 1612951 1614111 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: dfe:Dfer_3167 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold domain protein; oxidoreductase domain-containing protein complement(1612951..1614111) Cyclobacterium marinum DSM 745 11033789 YP_004773366.1 CDS Cycma_1364 NC_015914.1 1614162 1615193 R PFAM: Xylose isomerase-like TIM barrel; KEGG: sli:Slin_0969 xylose isomerase; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase complement(1614162..1615193) Cyclobacterium marinum DSM 745 11033790 YP_004773367.1 CDS Cycma_1365 NC_015914.1 1615362 1616567 R KEGG: dfe:Dfer_3169 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1615362..1616567) Cyclobacterium marinum DSM 745 11033791 YP_004773368.1 CDS Cycma_1366 NC_015914.1 1616597 1617664 R KEGG: sli:Slin_0967 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1616597..1617664) Cyclobacterium marinum DSM 745 11033792 YP_004773369.1 CDS Cycma_1367 NC_015914.1 1617777 1618574 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: sli:Slin_0966 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein complement(1617777..1618574) Cyclobacterium marinum DSM 745 11033793 YP_004773370.1 CDS Cycma_1368 NC_015914.1 1618650 1621292 R PFAM: Cytochrome c; TIGRFAM: heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR003088:IPR013427; KEGG: sli:Slin_0965 heme-binding protein; PFAM: Cytochrome c, class I; SPTR: Heme-binding domain-containing protein; TIGRFAM: haem-binding region; heme-binding protein complement(1618650..1621292) Cyclobacterium marinum DSM 745 11033794 YP_004773371.1 CDS Cycma_1369 NC_015914.1 1621518 1623023 R PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0963 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein complement(1621518..1623023) Cyclobacterium marinum DSM 745 11033795 YP_004773372.1 CDS Cycma_1370 NC_015914.1 1623053 1626145 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_0962 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(1623053..1626145) Cyclobacterium marinum DSM 745 11033796 YP_004773373.1 CDS Cycma_1371 NC_015914.1 1626481 1627989 R PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0956 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(1626481..1627989) Cyclobacterium marinum DSM 745 11033797 YP_004773374.1 CDS Cycma_1372 NC_015914.1 1628010 1631084 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_0955 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(1628010..1631084) Cyclobacterium marinum DSM 745 11033798 YP_004773375.1 CDS Cycma_1373 NC_015914.1 1631313 1631681 R PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: aas:Aasi_0930 50S ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; 50S ribosomal protein L19 complement(1631313..1631681) Cyclobacterium marinum DSM 745 11033799 YP_004773376.1 CDS Cycma_1374 NC_015914.1 1631730 1632455 R PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR016009:IPR002649; KEGG: mtt:Ftrac_1727 tRNA (guanine37-n(1)-) methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; tRNA (guanine-N(1)-)-methyltransferase complement(1631730..1632455) Cyclobacterium marinum DSM 745 11033800 YP_004773377.1 CDS Cycma_1375 NC_015914.1 1632462 1632992 R PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR002676:IPR007903:IPR011961; KEGG: dfe:Dfer_2581 16S rRNA processing protein RimM; PFAM: PRC-barrel; RimM protein; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; ribosome maturation factor rimM complement(1632462..1632992) Cyclobacterium marinum DSM 745 11033801 YP_004773378.1 CDS Cycma_1376 NC_015914.1 1633007 1633588 R PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: mtt:Ftrac_1729 SSU ribosomal protein s16p; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; 30S ribosomal protein S16 complement(1633007..1633588) Cyclobacterium marinum DSM 745 11033802 YP_004773379.1 CDS Cycma_1377 NC_015914.1 1634379 1635521 D KEGG: gfo:GFO_2551 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1634379..1635521 Cyclobacterium marinum DSM 745 11033804 YP_004773380.1 CDS Cycma_1378 NC_015914.1 1635558 1637183 D PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: zpr:ZPR_3532 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: Choline/carnitine/betaine transport; TIGRFAM: BCCT transporter; choline/carnitine/betaine transporter 1635558..1637183 Cyclobacterium marinum DSM 745 11033805 YP_004773381.1 CDS Cycma_1379 NC_015914.1 1637194 1638054 D PFAM: Universal stress protein family; InterPro IPR006016; KEGG: gfo:GFO_2553 universal stress protein family protein; PFAM: UspA; SPTR: Universal stress protein family; UspA domain-containing protein 1637194..1638054 Cyclobacterium marinum DSM 745 11033806 YP_004773382.1 CDS Cycma_1380 NC_015914.1 1638396 1638527 D hypothetical protein 1638396..1638527 Cyclobacterium marinum DSM 745 11033807 YP_004773383.1 CDS Cycma_1381 NC_015914.1 1638799 1639092 R hypothetical protein complement(1638799..1639092) Cyclobacterium marinum DSM 745 11033808 YP_004773384.1 CDS Cycma_1382 NC_015914.1 1640308 1640568 R hypothetical protein complement(1640308..1640568) Cyclobacterium marinum DSM 745 11033809 YP_004773385.1 CDS Cycma_1383 NC_015914.1 1641661 1642668 D PFAM: Phosphotriesterase; COGs: COG1735 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001559; KEGG: rbi:RB2501_12292 phosphotriesterase; PFAM: Aryldialkylphosphatase; SPTR: Phosphotriesterase; aryldialkylphosphatase 1641661..1642668 Cyclobacterium marinum DSM 745 11033810 YP_004773386.1 CDS Cycma_1384 NC_015914.1 1642764 1643369 D KEGG: rbi:RB2501_10722 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1642764..1643369 Cyclobacterium marinum DSM 745 11033811 YP_004773387.1 CDS Cycma_1385 NC_015914.1 1643430 1645193 R PFAM: BlaR1 peptidase M56; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: sli:Slin_5187 peptidase M56 BlaR1; PFAM: Peptidase M56, BlaR1; SPTR: peptidase M56, BlaR1; peptidase M56 BlaR1 complement(1643430..1645193) Cyclobacterium marinum DSM 745 11033812 YP_004773388.1 CDS Cycma_1386 NC_015914.1 1645190 1645564 R PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: sli:Slin_5186 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR: transcriptional regulator; CopY family transcriptional repressor complement(1645190..1645564) Cyclobacterium marinum DSM 745 11033813 YP_004773389.1 CDS Cycma_1387 NC_015914.1 1645712 1646464 D PFAM: Protein of unknown function (DUF833); COGs: COG3332 conserved hypothetical protein; InterPro IPR008551; KEGG: swo:Swol_2245 hypothetical protein; PFAM: Protein of unknown function DUF833; SPTR: uncharacterized protein; hypothetical protein 1645712..1646464 Cyclobacterium marinum DSM 745 11033814 YP_004773390.1 CDS Cycma_1388 NC_015914.1 1646801 1647922 D PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; integrase 1646801..1647922 Cyclobacterium marinum DSM 745 11033815 YP_004773391.1 CDS Cycma_1390 NC_015914.1 1648941 1650113 D PFAM: transposase; InterPro IPR007069; KEGG: tjr:TherJR_1461 transposase; PFAM: Transposase, IS801/IS1294; SPTR: transposase; transposase 1648941..1650113 Cyclobacterium marinum DSM 745 11033817 YP_004773392.1 CDS Cycma_1391 NC_015914.1 1650426 1651133 D SPTR: uncharacterized protein; hypothetical protein 1650426..1651133 Cyclobacterium marinum DSM 745 11033818 YP_004773393.1 CDS Cycma_1392 NC_015914.1 1651277 1651687 D KEGG: pct:PC1_2136 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1651277..1651687 Cyclobacterium marinum DSM 745 11033819 YP_004773394.1 CDS Cycma_1393 NC_015914.1 1652000 1652404 D PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mtt:Ftrac_3585 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 1652000..1652404 Cyclobacterium marinum DSM 745 11033820 YP_004773395.1 CDS Cycma_1394 NC_015914.1 1652373 1652615 D PFAM: Protein of unknown function DUF86; InterPro IPR008201; KEGG: mtt:Ftrac_3586 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: uncharacterized protein; hypothetical protein 1652373..1652615 Cyclobacterium marinum DSM 745 11033821 YP_004773396.1 CDS Cycma_1395 NC_015914.1 1652856 1653965 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cpi:Cpin_4591 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1652856..1653965 Cyclobacterium marinum DSM 745 11033822 YP_004773397.1 CDS Cycma_1396 NC_015914.1 1654002 1654109 D hypothetical protein 1654002..1654109 Cyclobacterium marinum DSM 745 11033823 YP_004773398.1 CDS Cycma_1397 NC_015914.1 1654293 1654835 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: vfi:VF_0871 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: uncharacterized protein; TetR family transcriptional regulator 1654293..1654835 Cyclobacterium marinum DSM 745 11033824 YP_004773399.1 CDS Cycma_1398 NC_015914.1 1654832 1655623 D PFAM: FR47-like protein; InterPro IPR000182; KEGG: swp:swp_2557 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 1654832..1655623 Cyclobacterium marinum DSM 745 11033825 YP_004773400.1 CDS Cycma_1400 NC_015914.1 1656355 1656825 D PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fbc:FB2170_13081 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; SPTR: cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; Crp/Fnr family transcriptional regulator 1656355..1656825 Cyclobacterium marinum DSM 745 11033827 YP_004773401.1 CDS Cycma_1401 NC_015914.1 1656923 1657300 D PFAM: DoxX; KEGG: gob:Gobs_2005 DoxX family protein; SPTR: DoxX family protein; DoxX family protein 1656923..1657300 Cyclobacterium marinum DSM 745 11033828 YP_004773402.1 CDS Cycma_1402 NC_015914.1 1657337 1658356 D PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: chu:CHU_3130 hypothetical protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: uncharacterized protein; pirin 1657337..1658356 Cyclobacterium marinum DSM 745 11033829 YP_004773403.1 CDS Cycma_1403 NC_015914.1 1658435 1659307 D PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: chu:CHU_0677 hypothetical protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: uncharacterized protein; pirin 1658435..1659307 Cyclobacterium marinum DSM 745 11033830 YP_004773404.1 CDS Cycma_1404 NC_015914.1 1659434 1660540 D PFAM: Redoxin; InterPro IPR013740; KEGG: sli:Slin_2789 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; redoxin domain-containing protein 1659434..1660540 Cyclobacterium marinum DSM 745 11033831 YP_004773405.1 CDS Cycma_1405 NC_015914.1 1660719 1661480 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cly:Celly_1919 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: uncharacterized protein; AraC family transcriptional regulator complement(1660719..1661480) Cyclobacterium marinum DSM 745 11033832 YP_004773406.1 CDS Cycma_1406 NC_015914.1 1661526 1662668 R PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cly:Celly_1918 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; manually curated; major facilitator superfamily protein complement(1661526..1662668) Cyclobacterium marinum DSM 745 11033833 YP_004773407.1 CDS Cycma_1407 NC_015914.1 1663856 1665373 D PFAM: Glycosyl Hydrolase 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: sea:SeAg_B1211 glycosyl hydrolase, family 88; PFAM: Glycosyl hydrolase, family 88; SPTR: uncharacterized protein; glycoside hydrolase 1663856..1665373 Cyclobacterium marinum DSM 745 11033834 YP_004773408.1 CDS Cycma_1408 NC_015914.1 1665467 1665706 D hypothetical protein 1665467..1665706 Cyclobacterium marinum DSM 745 11033835 YP_004773409.1 CDS Cycma_1409 NC_015914.1 1665776 1666594 D KEGG: mar:MAE_11990 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1665776..1666594 Cyclobacterium marinum DSM 745 11033836 YP_004773410.1 CDS Cycma_1410 NC_015914.1 1666794 1667777 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: bacillithiol system thiol disulfide oxidoreductase, YpdA family; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: lby:Lbys_2762 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1666794..1667777 Cyclobacterium marinum DSM 745 11033837 YP_004773411.1 CDS Cycma_1411 NC_015914.1 1668117 1670126 D PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: cat:CA2559_10963 polyphosphate kinase; PFAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase 1668117..1670126 Cyclobacterium marinum DSM 745 11033838 YP_004773412.1 CDS Cycma_1412 NC_015914.1 1670116 1671198 D PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase 3 (some protein contain HAMP domain); KEGG: gfo:GFO_0037 adenylate/guanylate cyclase catalytic subunit; SPTR: Membrane protein containing adenylate/guanylate cyclase catalytic domain; adenylate/guanylate cyclase 1670116..1671198 Cyclobacterium marinum DSM 745 11033839 YP_004773413.1 CDS Cycma_1413 NC_015914.1 1671263 1674901 R PFAM: Calcineurin-like phosphoesterase; Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR004843:IPR000184; KEGG: cpi:Cpin_1411 metallophosphoesterase; PFAM: Metallophosphoesterase; Bacterial surface antigen (D15); SPTR: Metallophosphoesterase; metallophosphoesterase complement(1671263..1674901) Cyclobacterium marinum DSM 745 11033840 YP_004773414.1 CDS Cycma_1414 NC_015914.1 1674914 1675771 R KEGG: cpi:Cpin_1412 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1674914..1675771) Cyclobacterium marinum DSM 745 11033841 YP_004773415.1 CDS Cycma_1415 NC_015914.1 1675828 1677015 D PFAM: HD domain; InterPro IPR006674; KEGG: sli:Slin_2813 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Metal dependent phosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein 1675828..1677015 Cyclobacterium marinum DSM 745 11033842 YP_004773416.1 CDS Cycma_1416 NC_015914.1 1677241 1677891 D hypothetical protein 1677241..1677891 Cyclobacterium marinum DSM 745 11033843 YP_004773417.1 CDS Cycma_1417 NC_015914.1 1677915 1678826 R PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0318 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(1677915..1678826) Cyclobacterium marinum DSM 745 11033844 YP_004773418.1 CDS Cycma_1418 NC_015914.1 1678897 1679808 R PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: mtt:Ftrac_2759 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Membrane protein; hypothetical protein complement(1678897..1679808) Cyclobacterium marinum DSM 745 11033845 YP_004773419.1 CDS Cycma_1419 NC_015914.1 1679856 1680845 R PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269:IPR004652; KEGG: mtt:Ftrac_2760 tRNA-U20-dihydrouridine synthase; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; nitrogen regulator protein NIfR3 complement(1679856..1680845) Cyclobacterium marinum DSM 745 11033846 YP_004773420.1 CDS Cycma_1420 NC_015914.1 1680842 1680967 R hypothetical protein complement(1680842..1680967) Cyclobacterium marinum DSM 745 11033847 YP_004773421.1 CDS Cycma_1421 NC_015914.1 1680995 1681933 D PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: mtt:Ftrac_2761 abortive infection protein; PFAM: Abortive infection protein; SPTR: Metal-dependent membrane protease; abortive infection protein 1680995..1681933 Cyclobacterium marinum DSM 745 11033848 YP_004773422.1 CDS Cycma_1422 NC_015914.1 1682167 1683105 D PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: mtt:Ftrac_2761 abortive infection protein; PFAM: Abortive infection protein; SPTR: Metal-dependent membrane protease; abortive infection protein 1682167..1683105 Cyclobacterium marinum DSM 745 11033849 YP_004773423.1 CDS Cycma_1423 NC_015914.1 1683098 1683304 D KEGG: dfe:Dfer_2994 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1683098..1683304 Cyclobacterium marinum DSM 745 11033850 YP_004773424.1 CDS Cycma_1424 NC_015914.1 1683288 1684127 D PFAM: Cytidylyltransferase; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: mtt:Ftrac_2763 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1683288..1684127 Cyclobacterium marinum DSM 745 11033851 YP_004773425.1 CDS Cycma_1425 NC_015914.1 1684240 1684902 D PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; InterPro IPR003817:IPR004428; KEGG: mtt:Ftrac_2765 phosphatidylserine decarboxylase related protein; PFAM: Phosphatidylserine decarboxylase-related; SPTR: Phosphatidylserine decarboxylase proenzyme; TIGRFAM: Phosphatidylserine decarboxylase-related protein; phosphatidylserine decarboxylase proenzyme 1684240..1684902 Cyclobacterium marinum DSM 745 11033852 YP_004773426.1 CDS Cycma_1426 NC_015914.1 1684956 1685600 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: mtt:Ftrac_1349 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator, LuxR family; LuxR family transcriptional regulator complement(1684956..1685600) Cyclobacterium marinum DSM 745 11033853 YP_004773427.1 CDS Cycma_1427 NC_015914.1 1685590 1686357 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cpi:Cpin_6820 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: sensor histidine kinase; signal transduction histidine kinase complement(1685590..1686357) Cyclobacterium marinum DSM 745 11033854 YP_004773428.1 CDS Cycma_1428 NC_015914.1 1686350 1687021 R KEGG: cpi:Cpin_6819 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1686350..1687021) Cyclobacterium marinum DSM 745 11033855 YP_004773429.1 CDS Cycma_1429 NC_015914.1 1687055 1687405 R SPTR: Chaperone DnaK; hypothetical protein complement(1687055..1687405) Cyclobacterium marinum DSM 745 11033856 YP_004773430.1 CDS Cycma_1430 NC_015914.1 1687743 1688639 D PFAM: Ion transport protein; InterPro IPR005821; KEGG: ddf:DEFDS_1441 potassium channel protein; PFAM: Ion transport; SPTR: Cation transporter, VIC family; Ion transport protein 1687743..1688639 Cyclobacterium marinum DSM 745 11033857 YP_004773431.1 CDS Cycma_1431 NC_015914.1 1688803 1689897 R KEGG: cly:Celly_0071 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1688803..1689897) Cyclobacterium marinum DSM 745 11033858 YP_004773432.1 CDS Cycma_1432 NC_015914.1 1690893 1691888 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase; transposase IS116/IS110/IS902 family protein complement(1690893..1691888) Cyclobacterium marinum DSM 745 11033859 YP_004773433.1 CDS Cycma_1433 NC_015914.1 1693030 1694025 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase; transposase IS116/IS110/IS902 family protein complement(1693030..1694025) Cyclobacterium marinum DSM 745 11033860 YP_004773434.1 CDS Cycma_1434 NC_015914.1 1695020 1695829 D TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834:IPR006357; KEGG: rba:RB9200 N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD superfamily hydrolase 1695020..1695829 Cyclobacterium marinum DSM 745 11033861 YP_004773435.1 CDS Cycma_1435 NC_015914.1 1697257 1697985 R PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: ran:Riean_1995 ribosomal large subunit pseudouridine synthase F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; pseudouridine synthase complement(1697257..1697985) Cyclobacterium marinum DSM 745 11033862 YP_004773436.1 CDS Cycma_1436 NC_015914.1 1698002 1698991 R PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127:IPR011095:IPR005905; KEGG: phe:Phep_1847 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase complement(1698002..1698991) Cyclobacterium marinum DSM 745 11033863 YP_004773437.1 CDS Cycma_1437 NC_015914.1 1699288 1703571 D InterPro IPR001434; KEGG: wsu:WS1797 hypothetical protein; SPTR: Lipoprotein; TIGRFAM: Protein of unknown function DUF11; hypothetical protein 1699288..1703571 Cyclobacterium marinum DSM 745 11033864 YP_004773438.1 CDS Cycma_1438 NC_015914.1 1703777 1705696 D PFAM: Peptide-N-glycosidase F, N terminal; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1703777..1705696 Cyclobacterium marinum DSM 745 11033865 YP_004773439.1 CDS Cycma_1439 NC_015914.1 1705808 1706875 R InterPro IPR001258; KEGG: sli:Slin_5930 NHL repeat containing protein; PFAM: NHL repeat; SPTR: NHL repeat containing protein; NHL repeat containing protein complement(1705808..1706875) Cyclobacterium marinum DSM 745 11033866 YP_004773440.1 CDS Cycma_1440 NC_015914.1 1706885 1708312 R PFAM: Protein of unknown function (DUF1501); InterPro IPR010869:IPR006311; KEGG: sli:Slin_0958 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: Tat (Twin-arginine translocation) pathway signal sequence containing protein; hypothetical protein complement(1706885..1708312) Cyclobacterium marinum DSM 745 11033867 YP_004773441.1 CDS Cycma_1441 NC_015914.1 1708328 1710826 R PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: sli:Slin_0957 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: uncharacterized protein; hypothetical protein complement(1708328..1710826) Cyclobacterium marinum DSM 745 11033868 YP_004773442.1 CDS Cycma_1442 NC_015914.1 1711180 1713924 D PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); Carbohydrate binding module (family 6); InterPro IPR011429:IPR011444:IPR005084; KEGG: dfe:Dfer_3702 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; Carbohydrate binding domain, family 6; SPTR: uncharacterized protein; hypothetical protein 1711180..1713924 Cyclobacterium marinum DSM 745 11033869 YP_004773443.1 CDS Cycma_1443 NC_015914.1 1713926 1715389 D PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; InterPro IPR010869:IPR006311; KEGG: sli:Slin_5451 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; hypothetical protein 1713926..1715389 Cyclobacterium marinum DSM 745 11033870 YP_004773444.1 CDS Cycma_1444 NC_015914.1 1715476 1716510 R PFAM: Amidohydrolase; InterPro IPR006992; KEGG: fbc:FB2170_01577 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: uncharacterized protein; amidohydrolase complement(1715476..1716510) Cyclobacterium marinum DSM 745 11033871 YP_004773445.1 CDS Cycma_1445 NC_015914.1 1716682 1716819 D hypothetical protein 1716682..1716819 Cyclobacterium marinum DSM 745 11033872 YP_004773446.1 CDS Cycma_1446 NC_015914.1 1716937 1717443 D KEGG: pdi:BDI_2326 hypothetical protein; SPTR: Metal dependent phosphohydrolase; hypothetical protein 1716937..1717443 Cyclobacterium marinum DSM 745 11033873 YP_004773447.1 CDS Cycma_1447 NC_015914.1 1717652 1718842 D PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter; COGs: COG2807 Cyanate permease; InterPro IPR011701; KEGG: bld:BLi04347 YycB; PFAM: Major facilitator superfamily MFS-1; SPTR: Inner membrane transport protein YeaN; major facilitator superfamily protein 1717652..1718842 Cyclobacterium marinum DSM 745 11033874 YP_004773448.1 CDS Cycma_1448 NC_015914.1 1719001 1719603 D PFAM: Uncharacterized protein conserved in bacteria (DUF2179); COGs: COG4843 conserved hypothetical protein; HAMAP: UPF0316 protein; InterPro IPR019264; KEGG: mtt:Ftrac_2187 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: UPF0316 protein ALPR1_20318; hypothetical protein 1719001..1719603 Cyclobacterium marinum DSM 745 11033875 YP_004773449.1 CDS Cycma_1449 NC_015914.1 1719611 1720294 R PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); HAMAP: Monofunctional biosynthetic peptidoglycan transglycosylase; InterPro IPR001264:IPR011812; KEGG: zpr:ZPR_4618 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51; SPTR: Monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase complement(1719611..1720294) Cyclobacterium marinum DSM 745 11033876 YP_004773450.1 CDS Cycma_1450 NC_015914.1 1720540 1721805 R PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; COGs: COG2262 GTPase; InterPro IPR002917:IPR016496:IPR005225; KEGG: mtt:Ftrac_2681 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; GTP-binding protein HflX complement(1720540..1721805) Cyclobacterium marinum DSM 745 11033877 YP_004773451.1 CDS Cycma_1451 NC_015914.1 1722035 1722586 D PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: dfe:Dfer_2965 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1722035..1722586 Cyclobacterium marinum DSM 745 11033878 YP_004773452.1 CDS Cycma_1452 NC_015914.1 1722586 1723341 D COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR004013; KEGG: chu:CHU_0001 capsular polysaccharide biosynthesis protein; PFAM: PHP, C-terminal; SPTR: capsular polysaccharide biosynthesis protein; PHP domain-containing protein 1722586..1723341 Cyclobacterium marinum DSM 745 11033879 YP_004773453.1 CDS Cycma_1453 NC_015914.1 1723364 1724326 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: chu:CHU_0002 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dihydroflavonol 4-reductase; NAD-dependent epimerase/dehydratase 1723364..1724326 Cyclobacterium marinum DSM 745 11033880 YP_004773454.1 CDS Cycma_1454 NC_015914.1 1724426 1725838 D PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR001440:IPR019734; KEGG: mtt:Ftrac_2675 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat containing protein; hypothetical protein 1724426..1725838 Cyclobacterium marinum DSM 745 11033881 YP_004773455.1 CDS Cycma_1455 NC_015914.1 1725875 1726636 D PFAM: (2R)-phospho-3-sulfolactate synthase (ComA); COGs: COG1809 conserved hypothetical protein; InterPro IPR003830; KEGG: sli:Slin_0707 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; SPTR: Phosphosulfolactate synthase; (2R)-phospho-3-sulfolactate synthase ComA 1725875..1726636 Cyclobacterium marinum DSM 745 11033882 YP_004773456.1 CDS Cycma_1456 NC_015914.1 1726668 1727603 D PFAM: Domain of unknown function (DUF368); COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: mtt:Ftrac_2673 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Integral membrane protein; hypothetical protein 1726668..1727603 Cyclobacterium marinum DSM 745 11033883 YP_004773457.1 CDS Cycma_1457 NC_015914.1 1727600 1728346 D PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase; COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708:IPR006151; KEGG: cpi:Cpin_1671 shikimate dehydrogenase substrate-binding protein; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Shikimate dehydrogenase; shikimate dehydrogenase substrate binding domain-containing protein 1727600..1728346 Cyclobacterium marinum DSM 745 11033884 YP_004773458.1 CDS Cycma_1458 NC_015914.1 1728413 1730905 R KEGG: cao:Celal_0787 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1728413..1730905) Cyclobacterium marinum DSM 745 11033885 YP_004773459.1 CDS Cycma_1459 NC_015914.1 1731027 1732142 D PFAM: Squalene epoxidase; FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076; KEGG: mtt:Ftrac_2463 monooxygenase fad-binding protein; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; FAD dependent oxidoreductase 1731027..1732142 Cyclobacterium marinum DSM 745 11033886 YP_004773460.1 CDS Cycma_1460 NC_015914.1 1732205 1734607 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_5636 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor complement(1732205..1734607) Cyclobacterium marinum DSM 745 11033887 YP_004773461.1 CDS Cycma_1461 NC_015914.1 1734836 1735903 R PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: chu:CHU_3762 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase; fatty acid desaturase complement(1734836..1735903) Cyclobacterium marinum DSM 745 11033888 YP_004773462.1 CDS Cycma_1462 NC_015914.1 1735990 1736604 R TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: mtt:Ftrac_1993 protein involved in gliding motility gldd; SPTR: Gliding motility-associated lipoprotein GldD; TIGRFAM: Gliding motility-associated lipoprotein, GldD; gliding motility-associated lipoprotein GldD complement(1735990..1736604) Cyclobacterium marinum DSM 745 11033889 YP_004773463.1 CDS Cycma_1463 NC_015914.1 1736604 1737212 R PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mtt:Ftrac_2389 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; nitroreductase complement(1736604..1737212) Cyclobacterium marinum DSM 745 11033890 YP_004773464.1 CDS Cycma_1464 NC_015914.1 1737234 1739618 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_1981 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Probable TonB-dependent receptor; TonB-dependent receptor complement(1737234..1739618) Cyclobacterium marinum DSM 745 11033891 YP_004773465.1 CDS Cycma_1465 NC_015914.1 1739636 1740178 D KEGG: shg:Sph21_3035 twin-arginine translocation pathway signal; SPTR: uncharacterized protein; twin-arginine translocation pathway signal 1739636..1740178 Cyclobacterium marinum DSM 745 11033892 YP_004773466.1 CDS Cycma_1466 NC_015914.1 1740194 1741903 D PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: cpi:Cpin_5079 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase 1740194..1741903 Cyclobacterium marinum DSM 745 11033893 YP_004773467.1 CDS Cycma_1467 NC_015914.1 1742618 1742737 D hypothetical protein 1742618..1742737 Cyclobacterium marinum DSM 745 11033894 YP_004773468.1 CDS Cycma_1468 NC_015914.1 1742840 1743481 R PFAM: Signal peptidase (SPase) II; COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: mtt:Ftrac_2466 signal peptidase II; SPTR: Lipoprotein signal peptidase; lipoprotein signal peptidase complement(1742840..1743481) Cyclobacterium marinum DSM 745 11033895 YP_004773469.1 CDS Cycma_1469 NC_015914.1 1743484 1746858 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR002301; KEGG: mtt:Ftrac_2465 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; isoleucyl-tRNA synthetase complement(1743484..1746858) Cyclobacterium marinum DSM 745 11033896 YP_004773470.1 CDS Cycma_1470 NC_015914.1 1747117 1747248 D hypothetical protein 1747117..1747248 Cyclobacterium marinum DSM 745 11033897 YP_004773471.1 CDS Cycma_1471 NC_015914.1 1747903 1749231 R PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR006261:IPR003607; KEGG: mtt:Ftrac_2393 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: dGTPase; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase complement(1747903..1749231) Cyclobacterium marinum DSM 745 11033898 YP_004773472.1 CDS Cycma_1472 NC_015914.1 1749283 1750704 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: sli:Slin_6590 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(1749283..1750704) Cyclobacterium marinum DSM 745 11033899 YP_004773473.1 CDS Cycma_1473 NC_015914.1 1750716 1753895 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR005330:IPR004764; KEGG: cpi:Cpin_3339 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: Acriflavin resistance protein; MHYT; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(1750716..1753895) Cyclobacterium marinum DSM 745 11033900 YP_004773474.1 CDS Cycma_1474 NC_015914.1 1753899 1755083 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_4642 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1753899..1755083) Cyclobacterium marinum DSM 745 11033901 YP_004773475.1 CDS Cycma_1475 NC_015914.1 1755338 1756399 D PFAM: Domain of unknown function (DUF1083); KEGG: rmr:Rmar_2792 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1755338..1756399 Cyclobacterium marinum DSM 745 11033902 YP_004773476.1 CDS Cycma_1476 NC_015914.1 1756387 1757256 D KEGG: cat:CA2559_03570 probable lipoprotein; SPTR: uncharacterized protein; lipoprotein 1756387..1757256 Cyclobacterium marinum DSM 745 11033903 YP_004773477.1 CDS Cycma_1477 NC_015914.1 1757258 1758304 D PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR002734:IPR004794; KEGG: chu:CHU_0203 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 1757258..1758304 Cyclobacterium marinum DSM 745 11033904 YP_004773478.1 CDS Cycma_1478 NC_015914.1 1758297 1758767 D COGs: COG1956 GAF domain-containing protein; KEGG: mtt:Ftrac_1491 gafa; gaf domain-containing protein; SPTR: GAF domain protein; gaf domain-containing protein 1758297..1758767 Cyclobacterium marinum DSM 745 11033905 YP_004773479.1 CDS Cycma_1479 NC_015914.1 1759015 1761144 D InterPro IPR000835; KEGG: rba:RB9350 hypothetical protein; PFAM: HTH transcriptional regulator, MarR; SPTR: uncharacterized protein; regulatory protein MarR 1759015..1761144 Cyclobacterium marinum DSM 745 11033906 YP_004773480.1 CDS Cycma_1480 NC_015914.1 1761358 1762905 D PFAM: Fic/DOC family; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: cao:Celal_0831 filamentation induced by camp protein fic; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Filamentation induced by cAMP protein Fic; Fic family protein 1761358..1762905 Cyclobacterium marinum DSM 745 11033907 YP_004773481.1 CDS Cycma_1482 NC_015914.1 1763851 1765140 D KEGG: rba:RB11249 acyl-CoA thioesterase I; SPTR: O-antigen related protein; acyl-CoA thioesterase 1763851..1765140 Cyclobacterium marinum DSM 745 11033909 YP_004773482.1 CDS Cycma_1484 NC_015914.1 1765601 1766800 R PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003018:IPR003661:IPR003594; KEGG: GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; SPTR: Signal sensor histidine kinase (GAF domain); GAF sensor signal transduction histidine kinase complement(1765601..1766800) Cyclobacterium marinum DSM 745 11033911 YP_004773483.1 CDS Cycma_1485 NC_015914.1 1767197 1768153 D KEGG: fjo:Fjoh_3289 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1767197..1768153 Cyclobacterium marinum DSM 745 11033912 YP_004773484.1 CDS Cycma_1486 NC_015914.1 1768565 1770745 R KEGG: hdn:Hden_3441 extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; hypothetical protein complement(1768565..1770745) Cyclobacterium marinum DSM 745 11033913 YP_004773485.1 CDS Cycma_1488 NC_015914.1 1772047 1772553 D KEGG: cly:Celly_1706 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1772047..1772553 Cyclobacterium marinum DSM 745 11033915 YP_004773486.1 CDS Cycma_1491 NC_015914.1 1775387 1775548 R hypothetical protein complement(1775387..1775548) Cyclobacterium marinum DSM 745 11033918 YP_004773487.1 CDS Cycma_1492 NC_015914.1 1775979 1776557 D PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cly:Celly_1473 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 1775979..1776557 Cyclobacterium marinum DSM 745 11033919 YP_004773488.1 CDS Cycma_1493 NC_015914.1 1776638 1777081 D PFAM: Protein of unknown function (DUF1569); KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1776638..1777081 Cyclobacterium marinum DSM 745 11033920 YP_004773489.1 CDS Cycma_1494 NC_015914.1 1777090 1777725 D KEGG: chu:CHU_2272 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1777090..1777725 Cyclobacterium marinum DSM 745 11033921 YP_004773490.1 CDS Cycma_1495 NC_015914.1 1777878 1778060 D hypothetical protein 1777878..1778060 Cyclobacterium marinum DSM 745 11033922 YP_004773491.1 CDS Cycma_1497 NC_015914.1 1779373 1780032 D TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: bbk:BARBAKC583_0933 hexapeptide repeat-containing transferase; SPTR: Bacterial transferase hexapeptide repeat protein; hexapeptide repeat-containing transferase 1779373..1780032 Cyclobacterium marinum DSM 745 11033924 YP_004773492.1 CDS Cycma_1498 NC_015914.1 1780029 1781036 D PFAM: ATP-grasp domain; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR003806; KEGG: reu:Reut_A2484 carbamoyl phosphate synthase-like protein; PFAM: ATP-grasp fold, DUF201-type; SPTR: Carbamoylphosphate synthase; ATP-grasp fold domain-containing protein 1780029..1781036 Cyclobacterium marinum DSM 745 11033925 YP_004773493.1 CDS Cycma_1500 NC_015914.1 1782491 1783171 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator 1782491..1783171 Cyclobacterium marinum DSM 745 11033927 YP_004773494.1 CDS Cycma_1501 NC_015914.1 1783168 1784538 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: lby:Lbys_2086 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1783168..1784538 Cyclobacterium marinum DSM 745 11033928 YP_004773495.1 CDS Cycma_1502 NC_015914.1 1784611 1785909 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: fjo:Fjoh_4293 outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 1784611..1785909 Cyclobacterium marinum DSM 745 11033929 YP_004773496.1 CDS Cycma_1503 NC_015914.1 1785924 1787036 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fjo:Fjoh_4294 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1785924..1787036 Cyclobacterium marinum DSM 745 11033930 YP_004773497.1 CDS Cycma_1504 NC_015914.1 1787042 1790140 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR001036:IPR004763; KEGG: lby:Lbys_2083 heavy metal efflux pump, czca family; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 1787042..1790140 Cyclobacterium marinum DSM 745 11033931 YP_004773498.1 CDS Cycma_1505 NC_015914.1 1790626 1791156 D PFAM: Acetyltransferase (GNAT) family; COGs: COG3153 acetyltransferase; InterPro IPR000182; KEGG: psn:Pedsa_0393 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 1790626..1791156 Cyclobacterium marinum DSM 745 11033932 YP_004773499.1 CDS Cycma_1506 NC_015914.1 1791238 1791798 D PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: swp:swp_2408 dihydrofolate reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: uncharacterized protein; bifunctional deaminase-reductase domain-containing protein 1791238..1791798 Cyclobacterium marinum DSM 745 11033933 YP_004773500.1 CDS Cycma_1507 NC_015914.1 1791919 1792509 R PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: axy:AXYL_06108 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Decarboxylase; TIGRFAM: Conserved hypothetical protein CHP00730; hypothetical protein complement(1791919..1792509) Cyclobacterium marinum DSM 745 11033934 YP_004773501.1 CDS Cycma_1508 NC_015914.1 1792843 1793421 D PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase rdgB; InterPro IPR002637; KEGG: osp:Odosp_2520 nucleoside-triphosphatase RdgB; PFAM: Ham1-like protein; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein; nucleoside-triphosphatase rdgB 1792843..1793421 Cyclobacterium marinum DSM 745 11033935 YP_004773502.1 CDS Cycma_1509 NC_015914.1 1793462 1794091 D PFAM: Phosphoribulokinase / Uridine kinase; TIGRFAM: uridine kinase; COGs: COG0572 Uridine kinase; InterPro IPR006083; KEGG: mtt:Ftrac_2535 phosphoribulokinase/uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; SPTR: Uridine kinase; phosphoribulokinase/uridine kinase 1793462..1794091 Cyclobacterium marinum DSM 745 11033936 YP_004773503.1 CDS Cycma_1510 NC_015914.1 1794284 1794631 D SPTR: uncharacterized protein; hypothetical protein 1794284..1794631 Cyclobacterium marinum DSM 745 11033937 YP_004773504.1 CDS Cycma_1511 NC_015914.1 1794741 1797698 D PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335:IPR005791:IPR005665; KEGG: mtt:Ftrac_1996 protein translocase subunit SecF;protein translocase subunit SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Protein-export membrane protein SecD/protein-export membrane protein SecF; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; SecF protein; protein-export membrane protein SecD 1794741..1797698 Cyclobacterium marinum DSM 745 11033938 YP_004773505.1 CDS Cycma_1512 NC_015914.1 1797845 1798516 D KEGG: cpi:Cpin_6819 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1797845..1798516 Cyclobacterium marinum DSM 745 11033939 YP_004773506.1 CDS Cycma_1513 NC_015914.1 1798598 1799851 D PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; InterPro IPR002133; KEGG: fjo:Fjoh_1489 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase 1798598..1799851 Cyclobacterium marinum DSM 745 11033940 YP_004773507.1 CDS Cycma_1514 NC_015914.1 1800487 1801056 D PFAM: Protein of unknown function (DUF1572); InterPro IPR011466; KEGG: fps:FP1585 hypothetical protein; PFAM: Protein of unknown function DUF1572; SPTR: uncharacterized protein; hypothetical protein 1800487..1801056 Cyclobacterium marinum DSM 745 11033941 YP_004773508.1 CDS Cycma_1515 NC_015914.1 1801071 1801850 D KEGG: shg:Sph21_3319 hypothetical protein; SPTR: Protein EcsC; hypothetical protein 1801071..1801850 Cyclobacterium marinum DSM 745 11033942 YP_004773509.1 CDS Cycma_1516 NC_015914.1 1801913 1803010 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: sli:Slin_1698 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: oxidoreductase, NAD-binding Rossmann fold protein; oxidoreductase domain-containing protein complement(1801913..1803010) Cyclobacterium marinum DSM 745 11033943 YP_004773510.1 CDS Cycma_1517 NC_015914.1 1803007 1803621 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1803007..1803621) Cyclobacterium marinum DSM 745 11033944 YP_004773511.1 CDS Cycma_1518 NC_015914.1 1803928 1804674 D KEGG: gfo:GFO_3122 membrane or secreted protein; SPTR: uncharacterized protein; hypothetical protein 1803928..1804674 Cyclobacterium marinum DSM 745 11033945 YP_004773512.1 CDS Cycma_1519 NC_015914.1 1804774 1806354 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1804774..1806354) Cyclobacterium marinum DSM 745 11033946 YP_004773513.1 CDS Cycma_1520 NC_015914.1 1806482 1806922 R PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: integral membrane sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Signal transduction histidine kinase-like protein; response regulator receiver protein complement(1806482..1806922) Cyclobacterium marinum DSM 745 11033947 YP_004773514.1 CDS Cycma_1521 NC_015914.1 1807282 1807653 D PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: psn:Pedsa_3661 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: transcriptional regulator; CopY family transcriptional repressor 1807282..1807653 Cyclobacterium marinum DSM 745 11033948 YP_004773515.1 CDS Cycma_1522 NC_015914.1 1807650 1808909 D PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR008756:IPR006260; KEGG: bsa:Bacsa_3301 TonB family protein; PFAM: Peptidase M56, BlaR1; SPTR: TonB protein; TIGRFAM: TonB, C-terminal; TonB family protein 1807650..1808909 Cyclobacterium marinum DSM 745 11033949 YP_004773516.1 CDS Cycma_1523 NC_015914.1 1808979 1809815 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); KEGG: cao:Celal_0578 alpha/beta hydrolase fold protein; SPTR: uncharacterized protein; hypothetical protein complement(1808979..1809815) Cyclobacterium marinum DSM 745 11033950 YP_004773517.1 CDS Cycma_1524 NC_015914.1 1809974 1811176 R PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bba:Bd2163 sugar transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar efflux transporter; major facilitator superfamily protein complement(1809974..1811176) Cyclobacterium marinum DSM 745 11033951 YP_004773518.1 CDS Cycma_1525 NC_015914.1 1811809 1813041 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR014001; KEGG: mtt:Ftrac_2268 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1811809..1813041 Cyclobacterium marinum DSM 745 11033952 YP_004773519.1 CDS Cycma_1526 NC_015914.1 1813136 1813810 R PFAM: ABC transporter; COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: zpr:ZPR_2985 molybdenum transport atp-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Molybdenum transport atp-binding protein; ABC transporter complement(1813136..1813810) Cyclobacterium marinum DSM 745 11033953 YP_004773520.1 CDS Cycma_1527 NC_015914.1 1813803 1814477 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease; COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Molybdate ABC transporter, permease; TIGRFAM: Molybdate ABC transporter, permease; molybdate ABC transporter permease complement(1813803..1814477) Cyclobacterium marinum DSM 745 11033954 YP_004773521.1 CDS Cycma_1528 NC_015914.1 1814477 1815247 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950; KEGG: glo:Glov_0450 molybdenum ABC transporter, periplasmic molybdate-binding protein; SPTR: Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(1814477..1815247) Cyclobacterium marinum DSM 745 11033955 YP_004773522.1 CDS Cycma_1529 NC_015914.1 1815414 1816514 R PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase complement(1815414..1816514) Cyclobacterium marinum DSM 745 11033956 YP_004773523.1 CDS Cycma_1530 NC_015914.1 1816547 1817047 R PFAM: MepB protein; COGs: COG4815 conserved hypothetical protein; InterPro IPR011235; KEGG: mtt:Ftrac_3073 hypothetical protein; PFAM: Uncharacterised conserved protein UCP032285; SPTR: uncharacterized protein; hypothetical protein complement(1816547..1817047) Cyclobacterium marinum DSM 745 11033957 YP_004773524.1 CDS Cycma_1531 NC_015914.1 1817075 1818082 R KEGG: cao:Celal_1430 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1817075..1818082) Cyclobacterium marinum DSM 745 11033958 YP_004773525.1 CDS Cycma_1532 NC_015914.1 1818227 1819510 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: fbc:FB2170_14028 RB13-6 antigen; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: RB13-6 antigen; type I phosphodiesterase/nucleotide pyrophosphatase complement(1818227..1819510) Cyclobacterium marinum DSM 745 11033959 YP_004773526.1 CDS Cycma_1533 NC_015914.1 1819591 1820217 R KEGG: mbu:Mbur_1061 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1819591..1820217) Cyclobacterium marinum DSM 745 11033960 YP_004773527.1 CDS Cycma_1534 NC_015914.1 1820431 1821237 R PFAM: Domain of Unknown Function (DUF1206); InterPro IPR009597; KEGG: cat:CA2559_10228 hypothetical protein; PFAM: Protein of unknown function DUF1206; SPTR: uncharacterized protein; hypothetical protein complement(1820431..1821237) Cyclobacterium marinum DSM 745 11033961 YP_004773528.1 CDS Cycma_1535 NC_015914.1 1821384 1822028 R PFAM: DSBA-like thioredoxin domain; COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: gfo:GFO_0822 DsbA thioredoxin oxdioreductase-polyketide synthase; PFAM: DSBA oxidoreductase; SPTR: DSBA thioredoxin oxdioreductase-possible polyketide synthase; DSBA oxidoreductase complement(1821384..1822028) Cyclobacterium marinum DSM 745 11033962 YP_004773529.1 CDS Cycma_1536 NC_015914.1 1822306 1822872 R TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; KEGG: cat:CA2559_12088 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1822306..1822872) Cyclobacterium marinum DSM 745 11033963 YP_004773530.1 CDS Cycma_1537 NC_015914.1 1822929 1823492 R PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein; TetR family transcriptional regulator complement(1822929..1823492) Cyclobacterium marinum DSM 745 11033964 YP_004773531.1 CDS Cycma_1538 NC_015914.1 1823633 1825147 R PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: rba:RB2403 D-mannonate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; SPTR: Mannitol dehydrogenase domain protein; mannitol dehydrogenase complement(1823633..1825147) Cyclobacterium marinum DSM 745 11033965 YP_004773532.1 CDS Cycma_1539 NC_015914.1 1825149 1826861 R COGs: COG1457 Purine-cytosine permease and related protein; KEGG: transmembrane prediction; SPTR: uncharacterized protein; hypothetical protein complement(1825149..1826861) Cyclobacterium marinum DSM 745 11033966 YP_004773533.1 CDS Cycma_1541 NC_015914.1 1827484 1828473 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1827484..1828473) Cyclobacterium marinum DSM 745 11033968 YP_004773534.1 CDS Cycma_1542 NC_015914.1 1828917 1829870 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sna:Snas_5301 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1828917..1829870) Cyclobacterium marinum DSM 745 11033969 YP_004773535.1 CDS Cycma_1543 NC_015914.1 1830077 1830478 R hypothetical protein complement(1830077..1830478) Cyclobacterium marinum DSM 745 11033970 YP_004773536.1 CDS Cycma_1544 NC_015914.1 1830475 1830867 R hypothetical protein complement(1830475..1830867) Cyclobacterium marinum DSM 745 11033971 YP_004773537.1 CDS Cycma_1545 NC_015914.1 1831167 1831949 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_09296 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein 1831167..1831949 Cyclobacterium marinum DSM 745 11033972 YP_004773538.1 CDS Cycma_1546 NC_015914.1 1831946 1833301 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: fbc:FB2170_09286 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; oxidoreductase domain-containing protein 1831946..1833301 Cyclobacterium marinum DSM 745 11033973 YP_004773539.1 CDS Cycma_1547 NC_015914.1 1833506 1834378 R PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: zpr:ZPR_0713 NmrA family protein; SPTR: NmrA family protein; NmrA family protein complement(1833506..1834378) Cyclobacterium marinum DSM 745 11033974 YP_004773540.1 CDS Cycma_1548 NC_015914.1 1834432 1835013 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cts:Ctha_2427 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; Crp/Fnr family transcriptional regulator complement(1834432..1835013) Cyclobacterium marinum DSM 745 11033975 YP_004773541.1 CDS Cycma_1549 NC_015914.1 1835628 1835930 R PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR001387:IPR013430; KEGG: gfo:GFO_1993 plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; SPTR: Plasmid maintenance system antidote protein; TIGRFAM: Addiction module antidote protein, HigA; XRE family transcriptional regulator complement(1835628..1835930) Cyclobacterium marinum DSM 745 11033976 YP_004773542.1 CDS Cycma_1550 NC_015914.1 1835942 1836223 R PFAM: Plasmid maintenance system killer protein; COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: chu:CHU_0643 hypothetical protein; PFAM: Plasmid maintenance system killer; SPTR: uncharacterized protein; plasmid maintenance system killer protein complement(1835942..1836223) Cyclobacterium marinum DSM 745 11033977 YP_004773543.1 CDS Cycma_1552 NC_015914.1 1837064 1837915 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1837064..1837915) Cyclobacterium marinum DSM 745 11033979 YP_004773544.1 CDS Cycma_1553 NC_015914.1 1838193 1838621 R KEGG: fbc:FB2170_11041 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1838193..1838621) Cyclobacterium marinum DSM 745 11033980 YP_004773545.1 CDS Cycma_1556 NC_015914.1 1840451 1840999 R PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_03435 polyketide synthesis domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Polyketide synthesis domain protein; cupin complement(1840451..1840999) Cyclobacterium marinum DSM 745 11033983 YP_004773546.1 CDS Cycma_1557 NC_015914.1 1841012 1841629 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR001509; KEGG: geb:GM18_2351 short-chain dehydrogenase/reductase SDR; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase complement(1841012..1841629) Cyclobacterium marinum DSM 745 11033984 YP_004773547.1 CDS Cycma_1559 NC_015914.1 1841930 1842232 D hypothetical protein 1841930..1842232 Cyclobacterium marinum DSM 745 11033986 YP_004773548.1 CDS Cycma_1560 NC_015914.1 1842236 1842583 D PFAM: IS66 Orf2 like protein; InterPro IPR008878; KEGG: zpr:ZPR_3984 transposase orf1, IS66 family protein; PFAM: Transposase (), IS66 Orf2 like; SPTR: Transposase orf1, IS66 family protein; IS66 Orf2 family protein 1842236..1842583 Cyclobacterium marinum DSM 745 11033987 YP_004773549.1 CDS Cycma_1561 NC_015914.1 1842659 1844179 D PFAM: Transposase IS66 family; COGs: COG3436 Transposase and inactivated derivatives; InterPro IPR004291; KEGG: shg:Sph21_5072 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase; transposase IS66 1842659..1844179 Cyclobacterium marinum DSM 745 11033988 YP_004773550.1 CDS Cycma_1562 NC_015914.1 1844238 1844903 R KEGG: rbi:RB2501_03440 AraC family transcriptional regulator; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator complement(1844238..1844903) Cyclobacterium marinum DSM 745 11033989 YP_004773551.1 CDS Cycma_1563 NC_015914.1 1845014 1845445 R hypothetical protein complement(1845014..1845445) Cyclobacterium marinum DSM 745 11033990 YP_004773552.1 CDS Cycma_1564 NC_015914.1 1845590 1846399 R KEGG: fjo:Fjoh_1092 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1845590..1846399) Cyclobacterium marinum DSM 745 11033991 YP_004773553.1 CDS Cycma_1565 NC_015914.1 1846508 1846882 R PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); SPTR: Reverse transcriptase; RNA-directed DNA polymerase complement(1846508..1846882) Cyclobacterium marinum DSM 745 11033992 YP_004773554.1 CDS Cycma_1566 NC_015914.1 1847153 1847650 D hypothetical protein 1847153..1847650 Cyclobacterium marinum DSM 745 11033993 YP_004773555.1 CDS Cycma_1567 NC_015914.1 1847615 1848655 R PFAM: Protein of unknown function (DUF1016); COGs: COG4804 conserved hypothetical protein; InterPro IPR009362; KEGG: fsu:Fisuc_1719 protein of unknown function DUF1016; PFAM: Protein of unknown function DUF1016; SPTR: Uncharacterized protein yhcG; hypothetical protein complement(1847615..1848655) Cyclobacterium marinum DSM 745 11033994 YP_004773556.1 CDS Cycma_1568 NC_015914.1 1848850 1849305 R KEGG: bsn:BSn5_09010 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1848850..1849305) Cyclobacterium marinum DSM 745 11033995 YP_004773557.1 CDS Cycma_1569 NC_015914.1 1849508 1850008 R hypothetical protein complement(1849508..1850008) Cyclobacterium marinum DSM 745 11033996 YP_004773558.1 CDS Cycma_1570 NC_015914.1 1850181 1851443 R PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR: uncharacterized protein; RNA-directed DNA polymerase complement(1850181..1851443) Cyclobacterium marinum DSM 745 11033997 YP_004773559.1 CDS Cycma_1571 NC_015914.1 1852118 1853848 R KEGG: ypz:YPZ3_0996 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1852118..1853848) Cyclobacterium marinum DSM 745 11033998 YP_004773560.1 CDS Cycma_1572 NC_015914.1 1853845 1854933 R hypothetical protein complement(1853845..1854933) Cyclobacterium marinum DSM 745 11033999 YP_004773561.1 CDS Cycma_1573 NC_015914.1 1855115 1855792 R KEGG: fba:FIC_00637 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1855115..1855792) Cyclobacterium marinum DSM 745 11034000 YP_004773562.1 CDS Cycma_1574 NC_015914.1 1856125 1857298 R PFAM: transposase; InterPro IPR007069; KEGG: bph:Bphy_7618 transposase; PFAM: Transposase, IS801/IS1294; SPTR: transposase; manually curated; transposase complement(join(1856125..1856556,1856558..1857298)) Cyclobacterium marinum DSM 745 11034001 YP_004773563.1 CDS Cycma_1576 NC_015914.1 1860026 1862872 R KEGG: dfe:Dfer_5762 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1860026..1862872) Cyclobacterium marinum DSM 745 11034003 YP_004773564.1 CDS Cycma_1577 NC_015914.1 1863059 1863397 R PFAM: Protein of unknown function (DUF2847); TIGRFAM: bacillithiol system protein YtxJ; KEGG: mtt:Ftrac_2813 hypothetical protein; SPTR: General stress protein; hypothetical protein complement(1863059..1863397) Cyclobacterium marinum DSM 745 11034004 YP_004773565.1 CDS Cycma_1578 NC_015914.1 1863557 1864951 D KEGG: glo:Glov_2797 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1863557..1864951 Cyclobacterium marinum DSM 745 11034005 YP_004773566.1 CDS Cycma_1579 NC_015914.1 1864960 1865634 R PFAM: Exonuclease; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR013520:IPR006055; KEGG: cli:Clim_1265 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III PolC-type (PolIII); exonuclease RNase T and DNA polymerase III complement(1864960..1865634) Cyclobacterium marinum DSM 745 11034006 YP_004773567.1 CDS Cycma_1580 NC_015914.1 1865636 1867582 R PFAM: nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; nucleotidyltransferase DUF294; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: cli:Clim_1266 CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase ; Cyclic nucleotide-binding; Cystathionine beta-synthase, core; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: Cyclic nucleotide-binding; Cystathionine beta-synthase, core; SPTR: CBS domain protein; CBS domain and cyclic nucleotide-regulated nucleotidyltransferase complement(1865636..1867582) Cyclobacterium marinum DSM 745 11034007 YP_004773568.1 CDS Cycma_1581 NC_015914.1 1867667 1869565 R PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873:IPR011904; KEGG: mtt:Ftrac_1923 acetyl-coenzyme a synthetase; PFAM: AMP-dependent synthetase/ligase; SPTR: Acetate--CoA ligase; TIGRFAM: Acetate--CoA ligase; acetate/CoA ligase complement(1867667..1869565) Cyclobacterium marinum DSM 745 11034008 YP_004773569.1 CDS Cycma_1582 NC_015914.1 1869651 1871336 R PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; transporter, SSS family; COGs: COG4147 symporter; InterPro IPR001734:IPR019899:IPR019900; KEGG: cts:Ctha_1886 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Transporter, solute:sodium symporter (SSS) family; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; Sodium/solute symporter, subgroup; sodium symporter protein complement(1869651..1871336) Cyclobacterium marinum DSM 745 11034009 YP_004773570.1 CDS Cycma_1583 NC_015914.1 1871360 1871623 R TIGRFAM: solute:sodium symporter small subunit; COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: cpc:Cpar_1645 hypothetical protein; SPTR: Lipoprotein; TIGRFAM: Probable solute:sodium symporter, small subunit; solute symporter protein complement(1871360..1871623) Cyclobacterium marinum DSM 745 11034010 YP_004773571.1 CDS Cycma_1584 NC_015914.1 1871794 1872315 R TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: cpi:Cpin_0719 NAD metabolism ATPase/kinase-like protein; SPTR: ATPase/kinase involved in NAD metabolism-like protein; NAD metabolism ATPase/kinase-like protein complement(1871794..1872315) Cyclobacterium marinum DSM 745 11034011 YP_004773572.1 CDS Cycma_1585 NC_015914.1 1872315 1872977 R PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: gfo:GFO_3059 nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Nicotinamide mononucleotide transporter PnuC; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(1872315..1872977) Cyclobacterium marinum DSM 745 11034012 YP_004773573.1 CDS Cycma_1586 NC_015914.1 1873028 1874770 R PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR002938; KEGG: cpi:Cpin_0819 glucose-methanol-choline oxidoreductase; PFAM: Monooxygenase, FAD-binding; SPTR: GMC oxidoreductase; monooxygenase FAD-binding protein complement(1873028..1874770) Cyclobacterium marinum DSM 745 11034013 YP_004773574.1 CDS Cycma_1587 NC_015914.1 1875161 1876876 D PFAM: Dehydratase; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR000581; KEGG: dfe:Dfer_4563 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; SPTR: Dihydroxy-acid dehydratase; dihydroxy-acid and 6-phosphogluconate dehydratase 1875161..1876876 Cyclobacterium marinum DSM 745 11034014 YP_004773575.1 CDS Cycma_1588 NC_015914.1 1876941 1877717 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_1831 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 1876941..1877717 Cyclobacterium marinum DSM 745 11034015 YP_004773576.1 CDS Cycma_1589 NC_015914.1 1877790 1878155 D InterPro IPR011462; KEGG: zpr:ZPR_4196 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1877790..1878155 Cyclobacterium marinum DSM 745 11034016 YP_004773577.1 CDS Cycma_1590 NC_015914.1 1878166 1879182 D PFAM: Glycosyl hydrolases family 43; InterPro IPR013148; KEGG: rba:RB13146 xylosidase/arabinosidase; PFAM: Glycosyl hydrolases family 32, N-terminal; SPTR: Glycoside hydrolase, family 43; glycosyl hydrolase domain-containing protein 1878166..1879182 Cyclobacterium marinum DSM 745 11034017 YP_004773578.1 CDS Cycma_1591 NC_015914.1 1879456 1880472 D KEGG: cao:Celal_1430 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1879456..1880472 Cyclobacterium marinum DSM 745 11034018 YP_004773579.1 CDS Cycma_1592 NC_015914.1 1880614 1881786 D KEGG: plm:Plim_1880 PEBP family protein; SPTR: uncharacterized protein; hypothetical protein 1880614..1881786 Cyclobacterium marinum DSM 745 11034019 YP_004773580.1 CDS Cycma_1593 NC_015914.1 1882003 1882596 D KEGG: bsn:BSn5_09010 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1882003..1882596 Cyclobacterium marinum DSM 745 11034020 YP_004773581.1 CDS Cycma_1594 NC_015914.1 1882611 1882715 D hypothetical protein 1882611..1882715 Cyclobacterium marinum DSM 745 11034021 YP_004773582.1 CDS Cycma_1595 NC_015914.1 1882790 1884160 D PFAM: Beta-lactamase; Domain of unknown function (DUF3471); COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1882790..1884160 Cyclobacterium marinum DSM 745 11034022 YP_004773583.1 CDS Cycma_1596 NC_015914.1 1884328 1885029 D KEGG: cpi:Cpin_3480 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1884328..1885029 Cyclobacterium marinum DSM 745 11034023 YP_004773584.1 CDS Cycma_1597 NC_015914.1 1885471 1885773 D PFAM: Phage derived protein Gp49-like (DUF891); TIGRFAM: addiction module killer protein; COGs: COG3657 conserved hypothetical protein; InterPro IPR009241:IPR014056; KEGG: cao:Celal_1444 addiction module killer protein; PFAM: Protein of unknown function DUF891; SPTR: Addiction module killer protein; TIGRFAM: Addiction module killer protein, HI1419; addiction module killer protein 1885471..1885773 Cyclobacterium marinum DSM 745 11034024 YP_004773585.1 CDS Cycma_1598 NC_015914.1 1885775 1886056 D TIGRFAM: probable addiction module antidote protein; COGs: COG3636 transcriptional regulator protein; InterPro IPR014057; KEGG: cao:Celal_1445 addiction module antidote protein; SPTR: Addiction module antidote protein; TIGRFAM: Addiction module antidote protein, HI1420; addiction module antidote protein 1885775..1886056 Cyclobacterium marinum DSM 745 11034025 YP_004773586.1 CDS Cycma_1599 NC_015914.1 1886123 1886497 D hypothetical protein 1886123..1886497 Cyclobacterium marinum DSM 745 11034026 YP_004773587.1 CDS Cycma_1600 NC_015914.1 1886449 1886568 R hypothetical protein complement(1886449..1886568) Cyclobacterium marinum DSM 745 11034027 YP_004773588.1 CDS Cycma_1601 NC_015914.1 1887020 1887253 D hypothetical protein 1887020..1887253 Cyclobacterium marinum DSM 745 11034028 YP_004773589.1 CDS Cycma_1603 NC_015914.1 1888482 1890119 D KEGG: mbr:MONBRDRAFT_33744 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1888482..1890119 Cyclobacterium marinum DSM 745 11034030 YP_004773590.1 CDS Cycma_1604 NC_015914.1 1890571 1892070 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02110 secreted sulfatase YdeN; PFAM: Sulfatase; SPTR: secreted sulfatase ydeN; sulfatase 1890571..1892070 Cyclobacterium marinum DSM 745 11034031 YP_004773591.1 CDS Cycma_1605 NC_015914.1 1892087 1892593 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: vap:Vapar_5784 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family protein; N-acetyltransferase GCN5 1892087..1892593 Cyclobacterium marinum DSM 745 11034032 YP_004773592.1 CDS Cycma_1607 NC_015914.1 1893486 1894391 D PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; KEGG: sli:Slin_1417 esterase/lipase; SPTR: Esterase/lipase; esterase 1893486..1894391 Cyclobacterium marinum DSM 745 11034034 YP_004773593.1 CDS Cycma_1608 NC_015914.1 1894814 1896922 D PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; COGs: COG3347 conserved hypothetical protein; InterPro IPR001303:IPR002198:IPR013454; KEGG: dfe:Dfer_4610 short chain dehydrogenase; PFAM: Class II aldolase/adducin, N-terminal; Short-chain dehydrogenase/reductase SDR; SPTR: Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 1894814..1896922 Cyclobacterium marinum DSM 745 11034035 YP_004773594.1 CDS Cycma_1609 NC_015914.1 1896932 1898215 D TIGRFAM: L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype; COGs: COG4952 sugar isomerase; InterPro IPR012307; KEGG: sli:Slin_1804 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1896932..1898215 Cyclobacterium marinum DSM 745 11034036 YP_004773595.1 CDS Cycma_1610 NC_015914.1 1898252 1899583 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: zpr:ZPR_1551 carbohydrate kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; SPTR: Carbohydrate kinase; carbohydrate kinase 1898252..1899583 Cyclobacterium marinum DSM 745 11034037 YP_004773596.1 CDS Cycma_1611 NC_015914.1 1899601 1900524 D PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; KEGG: fbc:FB2170_14733 xylanase; SPTR: uncharacterized protein; xylanase 1899601..1900524 Cyclobacterium marinum DSM 745 11034038 YP_004773597.1 CDS Cycma_1612 NC_015914.1 1900521 1901834 D KEGG: ipa:Isop_0067 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1900521..1901834 Cyclobacterium marinum DSM 745 11034039 YP_004773598.1 CDS Cycma_1613 NC_015914.1 1901915 1902337 R PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: zpr:ZPR_0899 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; hypothetical protein complement(1901915..1902337) Cyclobacterium marinum DSM 745 11034040 YP_004773599.1 CDS Cycma_1614 NC_015914.1 1902443 1902910 D PFAM: Domain of unknown function (DUF336); COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: nit:NAL212_0634 hypothetical protein; PFAM: Protein of unknown function DUF336; SPTR: uncharacterized protein; hypothetical protein 1902443..1902910 Cyclobacterium marinum DSM 745 11034041 YP_004773600.1 CDS Cycma_1615 NC_015914.1 1902956 1904113 D PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: sli:Slin_4804 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II; class I and II aminotransferase 1902956..1904113 Cyclobacterium marinum DSM 745 11034042 YP_004773601.1 CDS Cycma_1616 NC_015914.1 1904128 1905057 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1904128..1905057 Cyclobacterium marinum DSM 745 11034043 YP_004773602.1 CDS Cycma_1617 NC_015914.1 1905227 1906306 R COGs: COG3021 conserved hypothetical protein; KEGG: gfo:GFO_1978 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1905227..1906306) Cyclobacterium marinum DSM 745 11034044 YP_004773603.1 CDS Cycma_1618 NC_015914.1 1906431 1908008 D PFAM: PIF1 helicase; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593; KEGG: 5'-3' DNA helicase; SMART: ATPase, AAA+ type, core; SPTR: 5'-3' DNA helicase; ATPase AAA 1906431..1908008 Cyclobacterium marinum DSM 745 11034045 YP_004773604.1 CDS Cycma_1619 NC_015914.1 1908140 1910266 D PFAM: PA14 domain; KEGG: mtt:Ftrac_3617 hypothetical protein; SPTR: Conserved repeat domain protein; hypothetical protein 1908140..1910266 Cyclobacterium marinum DSM 745 11034046 YP_004773605.1 CDS Cycma_1620 NC_015914.1 1910412 1913231 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439:IPR004602; KEGG: mtt:Ftrac_1878 excinuclease ABC, A subunit; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; excinuclease ABC subunit A 1910412..1913231 Cyclobacterium marinum DSM 745 11034047 YP_004773606.1 CDS Cycma_1621 NC_015914.1 1913398 1914858 D PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: mtt:Ftrac_0596 membrane bound O-acyl transferase MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 1913398..1914858 Cyclobacterium marinum DSM 745 11034048 YP_004773607.1 CDS Cycma_1622 NC_015914.1 1914864 1915796 D hypothetical protein 1914864..1915796 Cyclobacterium marinum DSM 745 11034049 YP_004773608.1 CDS Cycma_1623 NC_015914.1 1916128 1917108 D PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: phe:Phep_1133 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Serine/threonine-protein kinase Pkn1; sulfatase-modifying factor protein 1916128..1917108 Cyclobacterium marinum DSM 745 11034050 YP_004773609.1 CDS Cycma_1624 NC_015914.1 1917126 1918445 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: psn:Pedsa_1444 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 1917126..1918445 Cyclobacterium marinum DSM 745 11034051 YP_004773610.1 CDS Cycma_1625 NC_015914.1 1918450 1919370 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307:IPR006311; KEGG: shg:Sph21_3452 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1918450..1919370 Cyclobacterium marinum DSM 745 11034052 YP_004773611.1 CDS Cycma_1626 NC_015914.1 1919442 1919915 R KEGG: mtt:Ftrac_2357 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1919442..1919915) Cyclobacterium marinum DSM 745 11034053 YP_004773612.1 CDS Cycma_1627 NC_015914.1 1920316 1920537 D SPTR: uncharacterized protein; hypothetical protein 1920316..1920537 Cyclobacterium marinum DSM 745 11034054 YP_004773613.1 CDS Cycma_1628 NC_015914.1 1920539 1920955 R PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dfe:Dfer_4566 Fur family transcriptional regulator protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, FUR family; Fur family ferric uptake regulator complement(1920539..1920955) Cyclobacterium marinum DSM 745 11034055 YP_004773614.1 CDS Cycma_1629 NC_015914.1 1921075 1922850 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cly:Celly_1274 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter; Na+/solute symporter complement(1921075..1922850) Cyclobacterium marinum DSM 745 11034056 YP_004773615.1 CDS Cycma_1630 NC_015914.1 1923145 1924215 D PFAM: Phosphotransferase enzyme family; InterPro IPR002575; KEGG: coc:Coch_1518 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: mucin-desulfating sulfatase; aminoglycoside phosphotransferase 1923145..1924215 Cyclobacterium marinum DSM 745 11034057 YP_004773616.1 CDS Cycma_1631 NC_015914.1 1924234 1926327 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; COGs: COG1200 RecG-like helicase; InterProIPR004365:IPR011545:IPR001650:IPR014001:IPR 004609; KEGG: mtt:Ftrac_1994 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; ATP-dependent DNA helicase RecG 1924234..1926327 Cyclobacterium marinum DSM 745 11034058 YP_004773617.1 CDS Cycma_1632 NC_015914.1 1926414 1927250 D PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: zpr:ZPR_4528 OmpA/MotB family outer hypothetical protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB family outer membrane protein; OmpA/MotB domain-containing protein 1926414..1927250 Cyclobacterium marinum DSM 745 11034059 YP_004773618.1 CDS Cycma_1633 NC_015914.1 1927262 1927918 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR006145:IPR000748; KEGG: cpi:Cpin_0677 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; pseudouridine synthase 1927262..1927918 Cyclobacterium marinum DSM 745 11034060 YP_004773619.1 CDS Cycma_1634 NC_015914.1 1927995 1928966 D PFAM: ATPase associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: mtt:Ftrac_2805 atpase associated with various cellular activities aaa_3; PFAM: ATPase associated with various cellular activities, AAA-3; SPTR: ATPase, MoxR family; ATPase 1927995..1928966 Cyclobacterium marinum DSM 745 11034061 YP_004773620.1 CDS Cycma_1635 NC_015914.1 1928998 1930038 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: mtt:Ftrac_2549 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Sensor histidine kinase; signal transduction histidine kinase 1928998..1930038 Cyclobacterium marinum DSM 745 11034062 YP_004773621.1 CDS Cycma_1636 NC_015914.1 1930062 1930796 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: mtt:Ftrac_2550 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator; LytTR family two component transcriptional regulator 1930062..1930796 Cyclobacterium marinum DSM 745 11034063 YP_004773622.1 CDS Cycma_1637 NC_015914.1 1930925 1931680 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; Hypothetical protein Yopt; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cao:Celal_3405 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator; LytTR family two component transcriptional regulator 1930925..1931680 Cyclobacterium marinum DSM 745 11034064 YP_004773623.1 CDS Cycma_1638 NC_015914.1 1931735 1933096 R PFAM: PhoH-like protein; COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714:IPR006596; KEGG: mtt:Ftrac_1289 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; SPTR: PhoH family protein; PhoH family protein complement(1931735..1933096) Cyclobacterium marinum DSM 745 11034065 YP_004773624.1 CDS Cycma_1639 NC_015914.1 1933469 1933939 D PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; InterPro IPR019229; KEGG: shg:Sph21_5165 hypothetical protein; PFAM: Protein of unknown function DUF2166; SPTR: uncharacterized protein; hypothetical protein 1933469..1933939 Cyclobacterium marinum DSM 745 11034066 YP_004773625.1 CDS Cycma_1640 NC_015914.1 1934126 1934950 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cao:Celal_1275 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulatory protein; AraC family transcriptional regulator complement(1934126..1934950) Cyclobacterium marinum DSM 745 11034067 YP_004773626.1 CDS Cycma_1641 NC_015914.1 1935028 1935324 R PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system; plasmid stabilization system complement(1935028..1935324) Cyclobacterium marinum DSM 745 11034068 YP_004773627.1 CDS Cycma_1642 NC_015914.1 1935327 1935560 R hypothetical protein complement(1935327..1935560) Cyclobacterium marinum DSM 745 11034069 YP_004773628.1 CDS Cycma_1643 NC_015914.1 1935876 1938059 R PFAM: Prolyl oligopeptidase; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: shg:Sph21_2473 dipeptidyl-peptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Dipeptidyl peptidase IV (DPP IV) N-terminal region domain protein; peptidase S9B dipeptidylpeptidase IV domain-containing protein complement(1935876..1938059) Cyclobacterium marinum DSM 745 11034070 YP_004773629.1 CDS Cycma_1644 NC_015914.1 1938368 1939471 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gfo:GFO_2162 secreted beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Secreted beta-lactamase; beta-lactamase 1938368..1939471 Cyclobacterium marinum DSM 745 11034071 YP_004773630.1 CDS Cycma_1645 NC_015914.1 1939508 1940284 R PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG1521 transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: sli:Slin_6393 Baf family transcriptional regulator; PFAM: Bordetella pertussis Bvg accessory factor; SPTR: Type III pantothenate kinase 2; TIGRFAM: Bordetella pertussis Bvg accessory factor; Baf family transcriptional acitvator complement(1939508..1940284) Cyclobacterium marinum DSM 745 11034072 YP_004773631.1 CDS Cycma_1646 NC_015914.1 1940414 1940893 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: lby:Lbys_1327 diamine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 1940414..1940893 Cyclobacterium marinum DSM 745 11034073 YP_004773632.1 CDS Cycma_1647 NC_015914.1 1941017 1942171 D COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: mtt:Ftrac_3307 hypothetical protein; SPTR: von Willebrand factor, type A; hypothetical protein 1941017..1942171 Cyclobacterium marinum DSM 745 11034074 YP_004773633.1 CDS Cycma_1648 NC_015914.1 1942175 1943701 D COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sli:Slin_0326 Mg-chelatase subunit ChlI-like protein; SPTR: magnesium chelatase; Mg-chelatase subunit ChlI-like protein 1942175..1943701 Cyclobacterium marinum DSM 745 11034075 YP_004773634.1 CDS Cycma_1649 NC_015914.1 1943875 1944078 R PFAM: Protein of unknown function (DUF2892); KEGG: mtt:Ftrac_2337 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1943875..1944078) Cyclobacterium marinum DSM 745 11034076 YP_004773635.1 CDS Cycma_1650 NC_015914.1 1944239 1945093 R PFAM: Prolyl oligopeptidase; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: alpha/beta hydrolase; alpha/beta hydrolase complement(1944239..1945093) Cyclobacterium marinum DSM 745 11034077 YP_004773636.1 CDS Cycma_1651 NC_015914.1 1945207 1945755 D PFAM: DinB family; InterPro IPR007837; KEGG: cpi:Cpin_4454 DinB family protein; PFAM: DinB; SPTR: uncharacterized protein; DinB family protein 1945207..1945755 Cyclobacterium marinum DSM 745 11034078 YP_004773637.1 CDS Cycma_1652 NC_015914.1 1946069 1946569 D PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: mtt:Ftrac_3363 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Thiosulfate sulfurtransferase GlpE; rhodanese-like protein 1946069..1946569 Cyclobacterium marinum DSM 745 11034079 YP_004773638.1 CDS Cycma_1653 NC_015914.1 1946611 1947282 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR006328:IPR006388; KEGG: gfo:GFO_3460 L-2-haloacid dehalogenase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: L-2-haloacid dehalogenase; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; haloacid dehalogenase 1946611..1947282 Cyclobacterium marinum DSM 745 11034080 YP_004773639.1 CDS Cycma_1654 NC_015914.1 1947297 1948055 D PFAM: Protein of unknown function, DUF547; InterPro IPR006869; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF547; SPTR: uncharacterized protein; hypothetical protein 1947297..1948055 Cyclobacterium marinum DSM 745 11034081 YP_004773640.1 CDS Cycma_1655 NC_015914.1 1948074 1948586 R KEGG: fps:FP0701 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1948074..1948586) Cyclobacterium marinum DSM 745 11034082 YP_004773641.1 CDS Cycma_1656 NC_015914.1 1948677 1949705 R PFAM: RimK-like ATP-grasp domain; KEGG: sli:Slin_2496 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1948677..1949705) Cyclobacterium marinum DSM 745 11034083 YP_004773642.1 CDS Cycma_1657 NC_015914.1 1949710 1950792 R KEGG: shg:Sph21_3228 outer membrane protein; SPTR: Outer membrane protein, OMP85 family; hypothetical protein complement(1949710..1950792) Cyclobacterium marinum DSM 745 11034084 YP_004773643.1 CDS Cycma_1658 NC_015914.1 1950910 1951449 R PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: chu:CHU_0382 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: uncharacterized protein; hypothetical protein complement(1950910..1951449) Cyclobacterium marinum DSM 745 11034085 YP_004773644.1 CDS Cycma_1659 NC_015914.1 1951476 1952186 R KEGG: sli:Slin_2530 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1951476..1952186) Cyclobacterium marinum DSM 745 11034086 YP_004773645.1 CDS Cycma_1660 NC_015914.1 1952248 1953057 R PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; KEGG: mtt:Ftrac_3396 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1952248..1953057) Cyclobacterium marinum DSM 745 11034087 YP_004773646.1 CDS Cycma_1661 NC_015914.1 1953126 1953392 R KEGG: shg:Sph21_4181 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1953126..1953392) Cyclobacterium marinum DSM 745 11034088 YP_004773647.1 CDS Cycma_1662 NC_015914.1 1953402 1953986 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02943 family; RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR014284; KEGG: chu:CHU_3097 ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1953402..1953986) Cyclobacterium marinum DSM 745 11034089 YP_004773648.1 CDS Cycma_1663 NC_015914.1 1954247 1954666 R PFAM: META domain; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: phe:Phep_0514 hypothetical protein; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: Lipoprotein; hypothetical protein complement(1954247..1954666) Cyclobacterium marinum DSM 745 11034090 YP_004773649.1 CDS Cycma_1664 NC_015914.1 1955151 1955909 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: phe:Phep_2313 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1955151..1955909 Cyclobacterium marinum DSM 745 11034091 YP_004773650.1 CDS Cycma_1665 NC_015914.1 1955906 1956676 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: chu:CHU_3642 alpha/beta fold family hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase; alpha/beta hydrolase complement(1955906..1956676) Cyclobacterium marinum DSM 745 11034092 YP_004773651.1 CDS Cycma_1666 NC_015914.1 1956669 1957823 R PFAM: Cellulase (glycosyl hydrolase 5); COGs: COG2730 Endoglucanase; InterPro IPR001547:IPR006311; KEGG: dfe:Dfer_0289 glycoside hydrolase 5; PFAM: Glycoside hydrolase, family 5; SPTR: Endoglucanase; glycoside hydrolase complement(1956669..1957823) Cyclobacterium marinum DSM 745 11034093 YP_004773652.1 CDS Cycma_1667 NC_015914.1 1957918 1959843 R PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005475:IPR005476:IPR005477; KEGG: mtt:Ftrac_1461 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase complement(1957918..1959843) Cyclobacterium marinum DSM 745 11034094 YP_004773653.1 CDS Cycma_1668 NC_015914.1 1959891 1960031 D hypothetical protein 1959891..1960031 Cyclobacterium marinum DSM 745 11034095 YP_004773654.1 CDS Cycma_1669 NC_015914.1 1960028 1960783 D PFAM: ScpA/B protein; COGs: COG1354 conserved hypothetical protein; HAMAP: Segregation and condensation protein A; InterPro IPR003768; KEGG: mtt:Ftrac_1460 condensin subunit scpa; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; SPTR: ScpA/B protein; segregation and condensation protein A 1960028..1960783 Cyclobacterium marinum DSM 745 11034096 YP_004773655.1 CDS Cycma_1670 NC_015914.1 1960780 1961841 D PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: mtt:Ftrac_1459 hypothetical protein; SPTR: Membrane protein; hypothetical protein 1960780..1961841 Cyclobacterium marinum DSM 745 11034097 YP_004773656.1 CDS Cycma_1671 NC_015914.1 1961856 1963226 R KEGG: sli:Slin_6336 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1961856..1963226) Cyclobacterium marinum DSM 745 11034098 YP_004773657.1 CDS Cycma_1672 NC_015914.1 1963372 1963788 R PFAM: Nucleoside diphosphate kinase; COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: sli:Slin_6029 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; SMART: Nucleoside diphosphate kinase, core; SPTR: Nucleoside diphosphate kinase; nucleoside diphosphate kinase complement(1963372..1963788) Cyclobacterium marinum DSM 745 11034099 YP_004773658.1 CDS Cycma_1673 NC_015914.1 1963928 1965019 D PFAM: DHHA1 domain; DHH family; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: mtt:Ftrac_2530 phosphoesterase RecJ domain protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Dhh family/dhha1 domain protein; phosphoesterase RecJ domain-containing protein 1963928..1965019 Cyclobacterium marinum DSM 745 11034100 YP_004773659.1 CDS Cycma_1674 NC_015914.1 1965003 1965932 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 1965003..1965932 Cyclobacterium marinum DSM 745 11034101 YP_004773660.1 CDS Cycma_1675 NC_015914.1 1966010 1966525 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 1966010..1966525 Cyclobacterium marinum DSM 745 11034102 YP_004773661.1 CDS Cycma_1676 NC_015914.1 1966541 1967101 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 1966541..1967101 Cyclobacterium marinum DSM 745 11034103 YP_004773662.1 CDS Cycma_1677 NC_015914.1 1967217 1968695 R PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR000644:IPR005990; KEGG: mtt:Ftrac_2373 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase; inosine-5'-monophosphate dehydrogenase complement(1967217..1968695) Cyclobacterium marinum DSM 745 11034104 YP_004773663.1 CDS Cycma_1678 NC_015914.1 1968829 1969485 R KEGG: rba:RB343 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1968829..1969485) Cyclobacterium marinum DSM 745 11034105 YP_004773664.1 CDS Cycma_1679 NC_015914.1 1969485 1970675 R PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: bba:Bd1101 sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: tRNA/rRNA cytosine-C5-methylase (Sun family protein); Fmu (Sun) domain-containing protein complement(1969485..1970675) Cyclobacterium marinum DSM 745 11034106 YP_004773665.1 CDS Cycma_1680 NC_015914.1 1970748 1971068 D hypothetical protein 1970748..1971068 Cyclobacterium marinum DSM 745 11034107 YP_004773666.1 CDS Cycma_1681 NC_015914.1 1971041 1971445 D KEGG: wvi:Weevi_0876 hypothetical protein; SPTR: magnesium citrate secondary transporter; hypothetical protein 1971041..1971445 Cyclobacterium marinum DSM 745 11034108 YP_004773667.1 CDS Cycma_1682 NC_015914.1 1971442 1972287 D PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556:IPR019874; KEGG: mtt:Ftrac_1493 protein-(glutamine-n5) methyltransferase, release factor-specific; PFAM: Methyltransferase small; SPTR: Protein-(Glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; protein-(glutamine-N5) methyltransferase 1971442..1972287 Cyclobacterium marinum DSM 745 11034109 YP_004773668.1 CDS Cycma_1683 NC_015914.1 1972363 1972971 R KEGG: psn:Pedsa_3110 thiamine pyrophosphokinase; SPTR: uncharacterized protein; thiamine pyrophosphokinase complement(1972363..1972971) Cyclobacterium marinum DSM 745 11034110 YP_004773669.1 CDS Cycma_1684 NC_015914.1 1973264 1973776 D PFAM: 3-hydroxyanthranilic acid dioxygenase; TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase; InterPro IPR010329; KEGG: chu:CHU_3382 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase; SPTR: 3-hydroxyanthranilate 3,4-dioxygenase; TIGRFAM: 3-hydroxyanthranilic acid dioxygenase; 3-hydroxyanthranilate 3,4-dioxygenase 1973264..1973776 Cyclobacterium marinum DSM 745 11034111 YP_004773670.1 CDS Cycma_1685 NC_015914.1 1973836 1975116 D PFAM: Aminotransferase class-V; TIGRFAM: kynureninase; COGs: COG3844 Kynureninase; InterPro IPR010111; KEGG: mtt:Ftrac_2835 kynureninase; SPTR: Kynureninase; TIGRFAM: Kynureninase; kynureninase 1973836..1975116 Cyclobacterium marinum DSM 745 11034112 YP_004773671.1 CDS Cycma_1686 NC_015914.1 1975142 1976494 D PFAM: FAD binding domain; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938; KEGG: mtt:Ftrac_2836 kynurenine 3-monooxygenase; PFAM: Monooxygenase, FAD-binding; SPTR: Kynurenine 3-monooxygenase; monooxygenase FAD-binding protein 1975142..1976494 Cyclobacterium marinum DSM 745 11034113 YP_004773672.1 CDS Cycma_1687 NC_015914.1 1976496 1977419 R COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: abm:ABSDF2692 D-cysteine desulfhydrase (DcyD); SPTR: D-cysteine desulfhydrase; D-cysteine desulfhydrase complement(1976496..1977419) Cyclobacterium marinum DSM 745 11034114 YP_004773673.1 CDS Cycma_1688 NC_015914.1 1977472 1978506 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR006145:IPR006225; KEGG: mtt:Ftrac_1448 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; RluA family pseudouridine synthase 1977472..1978506 Cyclobacterium marinum DSM 745 11034115 YP_004773674.1 CDS Cycma_1689 NC_015914.1 1978997 1983331 D KEGG: mtt:Ftrac_0812 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1978997..1983331 Cyclobacterium marinum DSM 745 11034116 YP_004773675.1 CDS Cycma_1690 NC_015914.1 1983696 1984010 R SPTR: uncharacterized protein; hypothetical protein complement(1983696..1984010) Cyclobacterium marinum DSM 745 11034117 YP_004773676.1 CDS Cycma_1691 NC_015914.1 1984275 1984574 R hypothetical protein complement(1984275..1984574) Cyclobacterium marinum DSM 745 11034118 YP_004773677.1 CDS Cycma_1692 NC_015914.1 1984878 1985906 D PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; InterPro IPR004188:IPR002319:IPR004529; KEGG: mtt:Ftrac_2390 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1984878..1985906 Cyclobacterium marinum DSM 745 11034119 YP_004773678.1 CDS Cycma_1693 NC_015914.1 1986013 1986852 D TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: mtt:Ftrac_1827 methyltransferase fkbm family; SPTR: methyltransferase FkbM; TIGRFAM: Methyltransferase FkbM; FkbM family methyltransferase 1986013..1986852 Cyclobacterium marinum DSM 745 11034120 YP_004773679.1 CDS Cycma_1694 NC_015914.1 1986852 1987631 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ppd:Ppro_1420 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: uncharacterized protein; family 2 glycosyl transferase 1986852..1987631 Cyclobacterium marinum DSM 745 11034121 YP_004773680.1 CDS Cycma_1695 NC_015914.1 1987997 1988371 D hypothetical protein 1987997..1988371 Cyclobacterium marinum DSM 745 11034122 YP_004773681.1 CDS Cycma_1696 NC_015914.1 1988847 1989410 D PFAM: Protein of unknown function (DUF3244); SPTR: uncharacterized protein; hypothetical protein 1988847..1989410 Cyclobacterium marinum DSM 745 11034123 YP_004773682.1 CDS Cycma_1697 NC_015914.1 1989515 1989982 R PFAM: AhpC/TSA family; KEGG: chu:CHU_1975 thioredoxin-like protein; SPTR: Thioredoxin-like protein; hypothetical protein complement(1989515..1989982) Cyclobacterium marinum DSM 745 11034124 YP_004773683.1 CDS Cycma_1698 NC_015914.1 1990003 1990839 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rbi:RB2501_13164 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein complement(1990003..1990839) Cyclobacterium marinum DSM 745 11034125 YP_004773684.1 CDS Cycma_1699 NC_015914.1 1990932 1991294 R hypothetical protein complement(1990932..1991294) Cyclobacterium marinum DSM 745 11034126 YP_004773685.1 CDS Cycma_1700 NC_015914.1 1991511 1993982 D PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR013221:IPR001608:IPR011079:IPR000821; KEGG: dfe:Dfer_4988 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; Mur ligase, central; SPTR: Mur ligase domain protein/alanine racemase; TIGRFAM: Alanine racemase; alanine racemase 1991511..1993982 Cyclobacterium marinum DSM 745 11034127 YP_004773686.1 CDS Cycma_1701 NC_015914.1 1994076 1994756 D KEGG: mxa:MXAN_2242 lipoprotein; SPTR: uncharacterized protein; hypothetical protein 1994076..1994756 Cyclobacterium marinum DSM 745 11034128 YP_004773687.1 CDS Cycma_1702 NC_015914.1 1994763 1996472 D KEGG: shg:Sph21_1807 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1994763..1996472 Cyclobacterium marinum DSM 745 11034129 YP_004773688.1 CDS Cycma_1703 NC_015914.1 1996488 1997384 R PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: shg:Sph21_3273 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase, M20/M25/M40 family; peptidase M28 complement(1996488..1997384) Cyclobacterium marinum DSM 745 11034130 YP_004773689.1 CDS Cycma_1704 NC_015914.1 1997441 1998454 D KEGG: mtt:Ftrac_2476 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 1997441..1998454 Cyclobacterium marinum DSM 745 11034131 YP_004773690.1 CDS Cycma_1705 NC_015914.1 1998667 1998927 R KEGG: shg:Sph21_1479 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(1998667..1998927) Cyclobacterium marinum DSM 745 11034132 YP_004773691.1 CDS Cycma_1706 NC_015914.1 1998908 1999222 R PFAM: Thioredoxin; InterPro IPR013766; KEGG: cly:Celly_3028 thioredoxin domain-containing protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin; thioredoxin complement(1998908..1999222) Cyclobacterium marinum DSM 745 11034133 YP_004773692.1 CDS Cycma_1707 NC_015914.1 1999309 1999878 R PFAM: Protein of unknown function DUF84; TIGRFAM: inosine/xanthosine triphosphatase; COGs: COG1986 conserved hypothetical protein; HAMAP: Protein of unknown function DUF84; InterPro IPR002786; KEGG: mtt:Ftrac_3465 hypothetical protein; PFAM: Protein of unknown function DUF84; SPTR: UPF0244 protein ALPR1_01780; TIGRFAM: Protein of unknown function DUF84; hypothetical protein complement(1999309..1999878) Cyclobacterium marinum DSM 745 11034134 YP_004773693.1 CDS Cycma_1708 NC_015914.1 1999909 2000616 R PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: psn:Pedsa_3830 protein of unknown function DUF28; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein ALPR1_01785; TIGRFAM: Protein of unknown function DUF28; hypothetical protein complement(1999909..2000616) Cyclobacterium marinum DSM 745 11034135 YP_004773694.1 CDS Cycma_1709 NC_015914.1 2000600 2000773 R hypothetical protein complement(2000600..2000773) Cyclobacterium marinum DSM 745 11034136 YP_004773695.1 CDS Cycma_1710 NC_015914.1 2000789 2002111 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: lby:Lbys_2555 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2000789..2002111 Cyclobacterium marinum DSM 745 11034137 YP_004773696.1 CDS Cycma_1711 NC_015914.1 2002209 2002580 D KEGG: lby:Lbys_2662 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2002209..2002580 Cyclobacterium marinum DSM 745 11034138 YP_004773697.1 CDS Cycma_1712 NC_015914.1 2002878 2003489 D PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cat:CA2559_05025 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: L-aspartate oxidase; hypothetical protein 2002878..2003489 Cyclobacterium marinum DSM 745 11034139 YP_004773698.1 CDS Cycma_1713 NC_015914.1 2003502 2003966 D PFAM: Bacterial transcription activator, effector binding domain; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: fjo:Fjoh_2178 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SPTR: Transcription activator, effector binding; transcription activator effector binding protein 2003502..2003966 Cyclobacterium marinum DSM 745 11034140 YP_004773699.1 CDS Cycma_1714 NC_015914.1 2003994 2004524 R SPTR: uncharacterized protein; hypothetical protein complement(2003994..2004524) Cyclobacterium marinum DSM 745 11034141 YP_004773700.1 CDS Cycma_1715 NC_015914.1 2004663 2004959 D hypothetical protein 2004663..2004959 Cyclobacterium marinum DSM 745 11034142 YP_004773701.1 CDS Cycma_1716 NC_015914.1 2005017 2006324 R COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: shg:Sph21_0181 PepSY-associated TM helix domain protein; PFAM: PepSY-associated TM helix; SPTR: Iron uptake protein; PepSY-associated TM helix domain-containing protein complement(2005017..2006324) Cyclobacterium marinum DSM 745 11034143 YP_004773702.1 CDS Cycma_1717 NC_015914.1 2006980 2007663 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; KEGG: ppn:Palpr_2095 TonB family protein; SPTR: TonB family protein; TonB family protein complement(2006980..2007663) Cyclobacterium marinum DSM 745 11034144 YP_004773703.1 CDS Cycma_1718 NC_015914.1 2007824 2008849 R PFAM: ABC transporter; TOBE domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439; KEGG: mtt:Ftrac_1666 ABC transporter related protein; PFAM: ABC transporter-like; SPTR: ABC transporter related protein; ABC transporter complement(2007824..2008849) Cyclobacterium marinum DSM 745 11034145 YP_004773704.1 CDS Cycma_1719 NC_015914.1 2009122 2010057 D PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: osp:Odosp_2271 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Redox-sensitive transcriptional activator OxyR; LysR family transcriptional regulator 2009122..2010057 Cyclobacterium marinum DSM 745 11034146 YP_004773705.1 CDS Cycma_1720 NC_015914.1 2010225 2011619 D PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: mtt:Ftrac_2603 peptidase M20; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase, M20/M25/M40 family; peptidase M20 2010225..2011619 Cyclobacterium marinum DSM 745 11034147 YP_004773706.1 CDS Cycma_1721 NC_015914.1 2011710 2013683 D PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834; KEGG: mtt:Ftrac_2502 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR: thiol:disulfide interchange protein DsbD; cytochrome c biogenesis protein transmembrane region 2011710..2013683 Cyclobacterium marinum DSM 745 11034148 YP_004773707.1 CDS Cycma_1722 NC_015914.1 2013939 2014559 D PFAM: HPP family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: cpi:Cpin_6723 HPP family protein; PFAM: HPP; SPTR: HPP family protein; manually curated; HPP family protein 2013939..2014559 Cyclobacterium marinum DSM 745 11034149 YP_004773708.1 CDS Cycma_1723 NC_015914.1 2014772 2015806 D PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: mtt:Ftrac_2597 ferrochelatase; PFAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase; ferrochelatase 2014772..2015806 Cyclobacterium marinum DSM 745 11034150 YP_004773709.1 CDS Cycma_1724 NC_015914.1 2015829 2016395 R PFAM: HD domain; TIGRFAM: phosphonate degradation operons associated HDIG domain protein; uncharacterized domain HDIG; COGs: COG4341 HD phosphohydrolase; InterPro IPR006674:IPR017670:IPR006675; KEGG: pfl:PFL_5886 HDIG domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Phosphonate degradation operons associated HDIG domain protein; TIGRFAM: Phosphonate degradation operon associated HDIG domain; HDIG; metal dependent phosphohydrolase complement(2015829..2016395) Cyclobacterium marinum DSM 745 11034151 YP_004773710.1 CDS Cycma_1725 NC_015914.1 2016556 2017281 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834:IPR006439; KEGG: dfe:Dfer_3095 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Possible phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily hydrolase 2016556..2017281 Cyclobacterium marinum DSM 745 11034152 YP_004773711.1 CDS Cycma_1726 NC_015914.1 2017278 2018624 D KEGG: cse:Cseg_3202 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2017278..2018624 Cyclobacterium marinum DSM 745 11034153 YP_004773712.1 CDS Cycma_1727 NC_015914.1 2018633 2018833 R hypothetical protein complement(2018633..2018833) Cyclobacterium marinum DSM 745 11034154 YP_004773713.1 CDS Cycma_1728 NC_015914.1 2018830 2019435 R PFAM: NnrU protein; COGs: COG2020 protein-S-isoprenylcysteine methyltransferase; KEGG: mtt:Ftrac_2288 isoprenylcysteine carboxyl methyltransferase; SPTR: uncharacterized protein; isoprenylcysteine carboxyl methyltransferase complement(2018830..2019435) Cyclobacterium marinum DSM 745 11034155 YP_004773714.1 CDS Cycma_1729 NC_015914.1 2019450 2020115 D PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; COGs: COG0274 Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase; InterPro IPR002915:IPR011343; KEGG: mtt:Ftrac_1415 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 2019450..2020115 Cyclobacterium marinum DSM 745 11034156 YP_004773715.1 CDS Cycma_1730 NC_015914.1 2020081 2021283 R PFAM: Na+/Pi-cotransporter; COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: mtt:Ftrac_1748 Na+/picotransporter; PFAM: Na/Pi-cotransporter; SPTR: Sodium-dependent phosphate transporter 2C; Na+/Picotransporter complement(2020081..2021283) Cyclobacterium marinum DSM 745 11034157 YP_004773716.1 CDS Cycma_1731 NC_015914.1 2021598 2022728 D KEGG: mtt:Ftrac_1749 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2021598..2022728 Cyclobacterium marinum DSM 745 11034158 YP_004773717.1 CDS Cycma_1732 NC_015914.1 2022712 2023182 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: chu:CHU_0109 cytosine/adenosine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine/deoxycytidylate deaminase; CMP/dCMP deaminase zinc-binding protein 2022712..2023182 Cyclobacterium marinum DSM 745 11034159 YP_004773718.1 CDS Cycma_1733 NC_015914.1 2023301 2023906 D PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: chu:CHU_0108 superoxide dismutase, manganese; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; SPTR: Superoxide dismutase; manganese/iron superoxide dismutase 2023301..2023906 Cyclobacterium marinum DSM 745 11034160 YP_004773719.1 CDS Cycma_1734 NC_015914.1 2024060 2026549 D PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_3089 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; TonB-dependent receptor plug 2024060..2026549 Cyclobacterium marinum DSM 745 11034161 YP_004773720.1 CDS Cycma_1735 NC_015914.1 2026747 2027211 R PFAM: MaoC like domain; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: ppn:Palpr_1388 enoyL-CoA hydratase; PFAM: MaoC-like dehydratase; SPTR: MaoC domain protein; acyl dehydratase MaoC complement(2026747..2027211) Cyclobacterium marinum DSM 745 11034162 YP_004773721.1 CDS Cycma_1736 NC_015914.1 2027299 2027781 R KEGG: phe:Phep_1861 hypothetical protein; SPTR: Chaperone protein ClpB; hypothetical protein complement(2027299..2027781) Cyclobacterium marinum DSM 745 11034163 YP_004773722.1 CDS Cycma_1737 NC_015914.1 2027967 2028866 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; TIGRFAM: tyrosine recombinase XerD; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: chu:CHU_2702 site-specific recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 2; tyrosine recombinase XerC complement(2027967..2028866) Cyclobacterium marinum DSM 745 11034164 YP_004773723.1 CDS Cycma_1738 NC_015914.1 2028995 2029429 D PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; COGs: COG0757 3-dehydroquinate dehydratase II; HAMAP: Dehydroquinase, class II; InterPro IPR001874; KEGG: cpi:Cpin_2345 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase, class II; SPTR: 3-dehydroquinate dehydratase, type II; TIGRFAM: Dehydroquinase, class II; 3-dehydroquinate dehydratase 2028995..2029429 Cyclobacterium marinum DSM 745 11034165 YP_004773724.1 CDS Cycma_1739 NC_015914.1 2029429 2030490 D PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: sli:Slin_2434 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aspartate aminotransferase; class V aminotransferase 2029429..2030490 Cyclobacterium marinum DSM 745 11034166 YP_004773725.1 CDS Cycma_1740 NC_015914.1 2030503 2031081 D PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: sli:Slin_2433 multiple antibiotic resistance (MarC)-related protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: multiple antibiotic resistance protein MarC; multiple antibiotic resistance (MarC)-like protein 2030503..2031081 Cyclobacterium marinum DSM 745 11034167 YP_004773726.1 CDS Cycma_1741 NC_015914.1 2031599 2032129 D PFAM: PRC-barrel domain; InterPro IPR007903; KEGG: mem:Memar_0929 PRC-barrel domain-containing protein; PFAM: PRC-barrel; SPTR: uncharacterized protein; PRC-barrel domain-containing protein 2031599..2032129 Cyclobacterium marinum DSM 745 11034169 YP_004773727.1 CDS Cycma_1742 NC_015914.1 2032178 2032414 D hypothetical protein 2032178..2032414 Cyclobacterium marinum DSM 745 11034170 YP_004773728.1 CDS Cycma_1743 NC_015914.1 2032371 2032916 D PFAM: Carboxymuconolactone decarboxylase; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR003779:IPR004675; KEGG: cao:Celal_1273 alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 2032371..2032916 Cyclobacterium marinum DSM 745 11034171 YP_004773729.1 CDS Cycma_1744 NC_015914.1 2033411 2034820 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR002109:IPR013027; KEGG: bcl:ABC3038 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2033411..2034820 Cyclobacterium marinum DSM 745 11034172 YP_004773730.1 CDS Cycma_1745 NC_015914.1 2035002 2035664 D PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: cao:Celal_3012 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; alkyl hydroperoxide reductase 2035002..2035664 Cyclobacterium marinum DSM 745 11034173 YP_004773731.1 CDS Cycma_1746 NC_015914.1 2035579 2035749 R hypothetical protein complement(2035579..2035749) Cyclobacterium marinum DSM 745 11034174 YP_004773732.1 CDS Cycma_1747 NC_015914.1 2035902 2036816 D PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: gfo:GFO_0304 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR: Secreted protein containing DUF302; hypothetical protein 2035902..2036816 Cyclobacterium marinum DSM 745 11034175 YP_004773733.1 CDS Cycma_1748 NC_015914.1 2036904 2037692 R PFAM: NIPSNAP; InterPro IPR012577; KEGG: sli:Slin_4035 NIPSNAP family containing protein; PFAM: NIPSNAP; SPTR: NIPSNAP family containing protein; NIPSNAP family containing protein complement(2036904..2037692) Cyclobacterium marinum DSM 745 11034176 YP_004773734.1 CDS Cycma_1749 NC_015914.1 2037997 2038383 R PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; thioesterase complement(2037997..2038383) Cyclobacterium marinum DSM 745 11034177 YP_004773735.1 CDS Cycma_1750 NC_015914.1 2038705 2040276 R PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR003029:IPR019307:IPR004659; KEGG: mtt:Ftrac_2594 ribonuclease, rne/rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; SPTR: Ribonuclease G; TIGRFAM: Ribonuclease E/G; Rne/Rng family ribonuclease complement(2038705..2040276) Cyclobacterium marinum DSM 745 11034178 YP_004773736.1 CDS Cycma_1751 NC_015914.1 2040329 2040421 R KEGG: tde:TDE1911 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(2040329..2040421) Cyclobacterium marinum DSM 745 11034179 YP_004773737.1 CDS Cycma_1752 NC_015914.1 2040454 2041275 R PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR019734; KEGG: mtt:Ftrac_2593 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR2; SPTR: uncharacterized protein; hypothetical protein complement(2040454..2041275) Cyclobacterium marinum DSM 745 11034180 YP_004773738.1 CDS Cycma_1753 NC_015914.1 2041296 2041604 R PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: mtt:Ftrac_2592 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: DNA-binding protein HU; histone family protein DNA-binding protein complement(2041296..2041604) Cyclobacterium marinum DSM 745 11034181 YP_004773739.1 CDS Cycma_1754 NC_015914.1 2041764 2042846 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265:IPR003651:IPR005760; KEGG: psn:Pedsa_3127 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; SPTR: A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; A/G-specific adenine glycosylase 2041764..2042846 Cyclobacterium marinum DSM 745 11034182 YP_004773740.1 CDS Cycma_1755 NC_015914.1 2042893 2043360 D PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: dfe:Dfer_4439 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 2042893..2043360 Cyclobacterium marinum DSM 745 11034183 YP_004773741.1 CDS Cycma_1756 NC_015914.1 2043417 2044766 D PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170:IPR019862; KEGG: mtt:Ftrac_2589 gliding motility-associated protein glde; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; TIGRFAM: Gliding motility-associated protein GldE; gliding motility-associated protein GldE 2043417..2044766 Cyclobacterium marinum DSM 745 11034184 YP_004773742.1 CDS Cycma_1757 NC_015914.1 2045136 2049629 D PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: mtt:Ftrac_2525 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; SPTR: Ferredoxin-dependent glutamate synthase 1; ferredoxin-dependent glutamate synthase 2045136..2049629 Cyclobacterium marinum DSM 745 11034185 YP_004773743.1 CDS Cycma_1758 NC_015914.1 2049631 2051103 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: mtt:Ftrac_2524 glutamate synthase (NADH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Glutamate synthase, NADH/NADPH small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; glutamate synthase, NADH/NADPH small subunit 2049631..2051103 Cyclobacterium marinum DSM 745 11034186 YP_004773744.1 CDS Cycma_1759 NC_015914.1 2051316 2051480 R KEGG: ppn:Palpr_0655 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2051316..2051480) Cyclobacterium marinum DSM 745 11034187 YP_004773745.1 CDS Cycma_1760 NC_015914.1 2051818 2053038 D PFAM: Lipase (class 3); lysophospholipase; OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: cly:Celly_3134 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; OsmC family protein 2051818..2053038 Cyclobacterium marinum DSM 745 11034188 YP_004773746.1 CDS Cycma_1761 NC_015914.1 2053162 2053656 D PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: cao:Celal_3514 peptide methionine sulfoxide reductase MsrA; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Peptide methionine sulfoxide reductase MsrA 3; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase 2053162..2053656 Cyclobacterium marinum DSM 745 11034189 YP_004773747.1 CDS Cycma_1762 NC_015914.1 2053930 2055402 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR003661:IPR003594:IPR000014:IPR 001610; KEGG: lic:LIC12087 histidine kinase sensor protein; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase complement(2053930..2055402) Cyclobacterium marinum DSM 745 11034190 YP_004773748.1 CDS Cycma_1764 NC_015914.1 2056111 2058000 R PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fps:FP0890 small-conductance mechanosensitive ionchannel MscS1; PFAM: Mechanosensitive ion channel MscS; SPTR: Transmembrane ion channel; mechanosensitive ion channel protein MscS complement(2056111..2058000) Cyclobacterium marinum DSM 745 11034192 YP_004773749.1 CDS Cycma_1765 NC_015914.1 2058243 2058743 D PFAM: Protein of unknown function (DUF1706); COGs: COG4283 conserved hypothetical protein; InterPro IPR012550; KEGG: mtt:Ftrac_2925 hypothetical protein; PFAM: Protein of unknown function DUF1706; SPTR: uncharacterized protein; hypothetical protein 2058243..2058743 Cyclobacterium marinum DSM 745 11034193 YP_004773750.1 CDS Cycma_1766 NC_015914.1 2058743 2059144 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: sun:SUN_1218 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: uncharacterized protein; glyoxalase/bleomycin resistance protein/dioxygenase 2058743..2059144 Cyclobacterium marinum DSM 745 11034194 YP_004773751.1 CDS Cycma_1767 NC_015914.1 2059173 2060972 R hypothetical protein complement(2059173..2060972) Cyclobacterium marinum DSM 745 11034195 YP_004773752.1 CDS Cycma_1768 NC_015914.1 2061177 2062289 R PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: fbc:FB2170_11576 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2061177..2062289) Cyclobacterium marinum DSM 745 11034196 YP_004773753.1 CDS Cycma_1769 NC_015914.1 2062702 2063055 D PFAM: Protein of unknown function (DUF3127); KEGG: chu:CHU_3583 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2062702..2063055 Cyclobacterium marinum DSM 745 11034197 YP_004773754.1 CDS Cycma_1770 NC_015914.1 2063182 2063703 R PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: mtt:Ftrac_2582 5-(carboxyamino)imidazole ribonucleotide mutase; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(2063182..2063703) Cyclobacterium marinum DSM 745 11034198 YP_004773755.1 CDS Cycma_1771 NC_015914.1 2063700 2064839 R PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR003135:IPR005875; KEGG: chu:CHU_3733 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; SPTR: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(2063700..2064839) Cyclobacterium marinum DSM 745 11034199 YP_004773756.1 CDS Cycma_1772 NC_015914.1 2065047 2065199 R KEGG: cpi:Cpin_0628 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2065047..2065199) Cyclobacterium marinum DSM 745 11034200 YP_004773757.1 CDS Cycma_1773 NC_015914.1 2065279 2067057 R PFAM: MutS domain V; COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: mtt:Ftrac_2147 DNA mismatch repair protein MutS domain protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; SPTR: MutS domain protein; DNA mismatch repair protein MutS domain-containing protein complement(2065279..2067057) Cyclobacterium marinum DSM 745 11034201 YP_004773758.1 CDS Cycma_1774 NC_015914.1 2067483 2069090 R COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: cao:Celal_2817 PepSY-associated tm helix domain protein; PFAM: PepSY-associated TM helix; SPTR: PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein complement(2067483..2069090) Cyclobacterium marinum DSM 745 11034202 YP_004773759.1 CDS Cycma_1775 NC_015914.1 2069101 2069394 R KEGG: cao:Celal_2816 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(2069101..2069394) Cyclobacterium marinum DSM 745 11034203 YP_004773760.1 CDS Cycma_1776 NC_015914.1 2069397 2069723 R KEGG: fjo:Fjoh_1254 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2069397..2069723) Cyclobacterium marinum DSM 745 11034204 YP_004773761.1 CDS Cycma_1777 NC_015914.1 2069922 2070611 R KEGG: dfe:Dfer_1309 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2069922..2070611) Cyclobacterium marinum DSM 745 11034205 YP_004773762.1 CDS Cycma_1778 NC_015914.1 2070621 2070950 R KEGG: chu:CHU_1839 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2070621..2070950) Cyclobacterium marinum DSM 745 11034206 YP_004773763.1 CDS Cycma_1779 NC_015914.1 2071213 2072445 R KEGG: zpr:ZPR_1606 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2071213..2072445) Cyclobacterium marinum DSM 745 11034207 YP_004773764.1 CDS Cycma_1780 NC_015914.1 2072460 2074832 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1428 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor complement(2072460..2074832) Cyclobacterium marinum DSM 745 11034208 YP_004773765.1 CDS Cycma_1781 NC_015914.1 2075189 2076361 R PFAM: Peptidase propeptide and YPEB domain; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005075:IPR005625; KEGG: PepSY-associated TM helix domain-containing protein; PFAM: Peptidase M4, propeptide, PepSY; PepSY-associated TM helix; SPTR: iron-regulated transmembrane protein; propeptide PepSY amd peptidase M4 complement(2075189..2076361) Cyclobacterium marinum DSM 745 11034209 YP_004773766.1 CDS Cycma_1782 NC_015914.1 2076361 2078742 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010105; KEGG: gfo:GFO_2191 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(2076361..2078742) Cyclobacterium marinum DSM 745 11034210 YP_004773767.1 CDS Cycma_1783 NC_015914.1 2079282 2080079 D KEGG: fjo:Fjoh_1783 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2079282..2080079 Cyclobacterium marinum DSM 745 11034211 YP_004773768.1 CDS Cycma_1784 NC_015914.1 2080219 2081082 R PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_3562 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(2080219..2081082) Cyclobacterium marinum DSM 745 11034212 YP_004773769.1 CDS Cycma_1785 NC_015914.1 2081132 2081839 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mtt:Ftrac_2239 methyltransferase type 12; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase; type 11 methyltransferase complement(2081132..2081839) Cyclobacterium marinum DSM 745 11034213 YP_004773770.1 CDS Cycma_1786 NC_015914.1 2081836 2082915 R PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain; COGs: COG3424 naringenin-chalcone synthase; InterPro IPR001099:IPR012328; KEGG: psn:Pedsa_1773 chalcone and stilbene synthase domain protein; PFAM: Chalcone/stilbene synthase, N-terminal; Chalcone/stilbene synthase, C-terminal; SPTR: chalcone synthase (Naringenin-chalcone synthase); chalcone and stilbene synthase domain-containing protein complement(2081836..2082915) Cyclobacterium marinum DSM 745 11034214 YP_004773771.1 CDS Cycma_1787 NC_015914.1 2082981 2083871 D PFAM: UbiA prenyltransferase; InterPro IPR000537; KEGG: dol:Dole_2097 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Prenyltransferase, UbiA family; UbiA prenyltransferase 2082981..2083871 Cyclobacterium marinum DSM 745 11034215 YP_004773772.1 CDS Cycma_1788 NC_015914.1 2083998 2087432 D PFAM: Cytochrome c; Trehalose utilisation; PKD domain; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR000601:IPR003088; KEGG: cpi:Cpin_7275 PKD domain containing protein; PFAM: PKD; Cytochrome c, class I; SMART: PKD; SPTR: Transcriptional regulator, Crp/Fnr family; PKD domain-containing protein 2083998..2087432 Cyclobacterium marinum DSM 745 11034216 YP_004773773.1 CDS Cycma_1789 NC_015914.1 2087488 2088660 R PFAM: Lycopene cyclase; TIGRFAM: lycopene cyclase; InterPro IPR008671; KEGG: cao:Celal_1771 lycopene beta and epsilon cyclase; PFAM: Lycopene beta/epsilon cyclase; SPTR: Lycopene cyclase; Lycopene beta and epsilon cyclase complement(2087488..2088660) Cyclobacterium marinum DSM 745 11034217 YP_004773774.1 CDS Cycma_1790 NC_015914.1 2088816 2089805 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: psn:Pedsa_3413 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2088816..2089805) Cyclobacterium marinum DSM 745 11034218 YP_004773775.1 CDS Cycma_1791 NC_015914.1 2089961 2090791 R KEGG: paa:Paes_1930 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2089961..2090791) Cyclobacterium marinum DSM 745 11034219 YP_004773776.1 CDS Cycma_1792 NC_015914.1 2091308 2092114 D PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: sli:Slin_1455 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; diaminopimelate epimerase 2091308..2092114 Cyclobacterium marinum DSM 745 11034220 YP_004773777.1 CDS Cycma_1793 NC_015914.1 2092145 2095525 D PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: Protein translocase subunit secA; InterPro IPR011115:IPR011130:IPR011116:IPR000185; KEGG: mtt:Ftrac_1758 protein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein; protein translocase subunit secA 2092145..2095525 Cyclobacterium marinum DSM 745 11034221 YP_004773778.1 CDS Cycma_1794 NC_015914.1 2095537 2096076 D KEGG: mtt:Ftrac_1757 sporulation domain-containing protein; SPTR: uncharacterized protein; hypothetical protein 2095537..2096076 Cyclobacterium marinum DSM 745 11034222 YP_004773779.1 CDS Cycma_1795 NC_015914.1 2096063 2097250 D PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR010168; KEGG: chu:CHU_0130 N-acyl-L-amino acid amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase, M20D family; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase 2096063..2097250 Cyclobacterium marinum DSM 745 11034223 YP_004773780.1 CDS Cycma_1796 NC_015914.1 2097300 2098040 D PFAM: S1/P1 Nuclease; InterPro IPR003154; KEGG: shg:Sph21_1546 S1/P1 nuclease; PFAM: S1/P1 nuclease; SPTR: S1/P1 nuclease; S1/P1 nuclease 2097300..2098040 Cyclobacterium marinum DSM 745 11034224 YP_004773781.1 CDS Cycma_1797 NC_015914.1 2098043 2098735 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: shg:Sph21_1137 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Competence protein F-related protein; phosphoribosyltransferase complement(2098043..2098735) Cyclobacterium marinum DSM 745 11034225 YP_004773782.1 CDS Cycma_1798 NC_015914.1 2098874 2099242 D KEGG: mtt:Ftrac_2383 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2098874..2099242 Cyclobacterium marinum DSM 745 11034226 YP_004773783.1 CDS Cycma_1799 NC_015914.1 2099239 2099997 D PFAM: Endonuclease/Exonuclease/phosphatase; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: mtt:Ftrac_2382 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; exodeoxyribonuclease III 2099239..2099997 Cyclobacterium marinum DSM 745 11034227 YP_004773784.1 CDS Cycma_1800 NC_015914.1 2100039 2100440 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro IPR003594; KEGG: mtt:Ftrac_2380 ATPase ATP-binding protein; PFAM: ATP-binding region, ATPase-like; SPTR: Anti-sigma regulatory factor; ATP-binding protein 2100039..2100440 Cyclobacterium marinum DSM 745 11034228 YP_004773785.1 CDS Cycma_1801 NC_015914.1 2100442 2100891 D PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054; InterPro IPR002036; KEGG: lby:Lbys_1166 hypothetical protein; PFAM: Uncharacterised protein family UPF0054; SPTR: Probable rRNA maturation factor; TIGRFAM: Uncharacterised protein family UPF0054; manually curated; metalloprotease ybeY 2100442..2100891 Cyclobacterium marinum DSM 745 11034229 YP_004773786.1 CDS Cycma_1802 NC_015914.1 2100945 2102810 D PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR002218:IPR004416; KEGG: chu:CHU_3502 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TIGRFAM: Glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 2100945..2102810 Cyclobacterium marinum DSM 745 11034230 YP_004773787.1 CDS Cycma_1803 NC_015914.1 2102812 2103699 D PFAM: Methyltransferase domain; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013217; KEGG: mtt:Ftrac_2377 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; type 12 methyltransferase 2102812..2103699 Cyclobacterium marinum DSM 745 11034231 YP_004773788.1 CDS Cycma_1804 NC_015914.1 2103696 2105450 D KEGG: dfe:Dfer_3804 hypothetical protein; SPTR: Lipoprotein; hypothetical protein 2103696..2105450 Cyclobacterium marinum DSM 745 11034232 YP_004773789.1 CDS Cycma_1805 NC_015914.1 2106302 2106736 D PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: mtt:Ftrac_1687 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; MarR family transcriptional regulator 2106302..2106736 Cyclobacterium marinum DSM 745 11034233 YP_004773790.1 CDS Cycma_1806 NC_015914.1 2106779 2109184 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: chu:CHU_3591 multifunctional 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase 2106779..2109184 Cyclobacterium marinum DSM 745 11034234 YP_004773791.1 CDS Cycma_1807 NC_015914.1 2109272 2110444 D PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: mtt:Ftrac_1684 acetyl-CoA acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; acetyl-CoA acetyltransferase 2109272..2110444 Cyclobacterium marinum DSM 745 11034235 YP_004773792.1 CDS Cycma_1808 NC_015914.1 2110517 2112325 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: mtt:Ftrac_1683 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-CoA dehydrogenase; acyl-CoA dehydrogenase 2110517..2112325 Cyclobacterium marinum DSM 745 11034236 YP_004773793.1 CDS Cycma_1809 NC_015914.1 2112335 2112841 D KEGG: zpr:ZPR_3644 metal-dependent hydrolase; SPTR: metal-dependent hydrolase; metal-dependent hydrolase 2112335..2112841 Cyclobacterium marinum DSM 745 11034237 YP_004773794.1 CDS Cycma_1810 NC_015914.1 2113167 2113733 D KEGG: dfe:Dfer_2215 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2113167..2113733 Cyclobacterium marinum DSM 745 11034238 YP_004773795.1 CDS Cycma_1811 NC_015914.1 2113905 2114084 D hypothetical protein 2113905..2114084 Cyclobacterium marinum DSM 745 11034239 YP_004773796.1 CDS Cycma_1812 NC_015914.1 2114529 2115032 D PFAM: Peptide methionine sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: dfe:Dfer_0925 methionine sulfoxide reductase A; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Methionine sulfoxide reductase A; methionine sulfoxide reductase A 2114529..2115032 Cyclobacterium marinum DSM 745 11034240 YP_004773797.1 CDS Cycma_1813 NC_015914.1 2115117 2115578 D PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; SPTR: Methionine-R-sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 2115117..2115578 Cyclobacterium marinum DSM 745 11034241 YP_004773798.1 CDS Cycma_1814 NC_015914.1 2115700 2117562 D PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR000383:IPR013736; KEGG: fbc:FB2170_10211 x-prolyl-dipeptidyl aminopeptidase; SPTR: X-prolyl-dipeptidyl aminopeptidase; x-prolyl-dipeptidyl aminopeptidase 2115700..2117562 Cyclobacterium marinum DSM 745 11034242 YP_004773799.1 CDS Cycma_1815 NC_015914.1 2117738 2118253 D PFAM: Redoxin; InterPro IPR013740; KEGG: sgo:SGO_1177 thioredoxin family protein; PFAM: Redoxin; SPTR: Thioredoxin family protein; redoxin domain-containing protein 2117738..2118253 Cyclobacterium marinum DSM 745 11034243 YP_004773800.1 CDS Cycma_1816 NC_015914.1 2118308 2118607 R hypothetical protein complement(2118308..2118607) Cyclobacterium marinum DSM 745 11034244 YP_004773801.1 CDS Cycma_1818 NC_015914.1 2119030 2119800 R PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: dfe:Dfer_1372 sigma-70 factor; SPTR: Sigma-70 factor; sigma-70 factor complement(2119030..2119800) Cyclobacterium marinum DSM 745 11034246 YP_004773802.1 CDS Cycma_1819 NC_015914.1 2119840 2120589 R PFAM: D-ala-D-ala dipeptidase; COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755; KEGG: dfe:Dfer_2827 peptidase M15D VanX D-ala-D-ala dipeptidase; PFAM: Peptidase M15D, vanX D-ala-D-ala dipeptidase; SPTR: D-Ala-D-Ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase complement(2119840..2120589) Cyclobacterium marinum DSM 745 11034247 YP_004773803.1 CDS Cycma_1820 NC_015914.1 2120613 2121371 R PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: cao:Celal_1238 serine 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Serine 3-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2120613..2121371) Cyclobacterium marinum DSM 745 11034248 YP_004773804.1 CDS Cycma_1821 NC_015914.1 2121432 2122211 R KEGG: mtt:Ftrac_2975 port-related protein; SPTR: PorT-related protein; port-like protein complement(2121432..2122211) Cyclobacterium marinum DSM 745 11034249 YP_004773805.1 CDS Cycma_1822 NC_015914.1 2122160 2122882 R PFAM: ubiE/COQ5 methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: mtt:Ftrac_2976 demethylmenaquinone methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE complement(2122160..2122882) Cyclobacterium marinum DSM 745 11034250 YP_004773806.1 CDS Cycma_1823 NC_015914.1 2122999 2123604 D PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR002917:IPR019987; KEGG: cpi:Cpin_7093 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; GTP-binding protein engB 2122999..2123604 Cyclobacterium marinum DSM 745 11034251 YP_004773807.1 CDS Cycma_1824 NC_015914.1 2123663 2124100 D KEGG: mtt:Ftrac_3298 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2123663..2124100 Cyclobacterium marinum DSM 745 11034252 YP_004773808.1 CDS Cycma_1825 NC_015914.1 2124106 2124426 D SPTR: uncharacterized protein; hypothetical protein 2124106..2124426 Cyclobacterium marinum DSM 745 11034253 YP_004773809.1 CDS Cycma_1826 NC_015914.1 2124461 2125477 R PFAM: Fructose-1-6-bisphosphatase; COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase; InterPro IPR000146; KEGG: mtt:Ftrac_2848 D-fructose 1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase class 1 complement(2124461..2125477) Cyclobacterium marinum DSM 745 11034254 YP_004773810.1 CDS Cycma_1827 NC_015914.1 2125532 2126800 D PFAM: Amino acid kinase; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048; KEGG: psn:Pedsa_0917 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; aspartate/glutamate/uridylate kinase 2125532..2126800 Cyclobacterium marinum DSM 745 11034255 YP_004773811.1 CDS Cycma_1828 NC_015914.1 2126845 2127336 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: pme:NATL1_20411 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine-phosphatase; protein tyrosine phosphatase complement(2126845..2127336) Cyclobacterium marinum DSM 745 11034256 YP_004773812.1 CDS Cycma_1829 NC_015914.1 2127506 2127919 D PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: chu:CHU_2723 ferric uptake regulation protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein; Fur family ferric uptake regulator 2127506..2127919 Cyclobacterium marinum DSM 745 11034257 YP_004773813.1 CDS Cycma_1830 NC_015914.1 2127968 2128597 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: mtt:Ftrac_1506 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; alkyl hydroperoxide reductase 2127968..2128597 Cyclobacterium marinum DSM 745 11034258 YP_004773814.1 CDS Cycma_1831 NC_015914.1 2128646 2129758 R PFAM: GAF domain; PAS fold; InterPro IPR003018:IPR013655; KEGG: zpr:ZPR_1017 two-component system sensor histidine kinase; PFAM: GAF; PAS fold-3; SPTR: Two-component system sensor histidine kinase; GAF domain-containing protein complement(2128646..2129758) Cyclobacterium marinum DSM 745 11034259 YP_004773815.1 CDS Cycma_1832 NC_015914.1 2130391 2132334 D PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR008250:IPR005834:IPR006404:IPR006416:IPR 001757; KEGG: cadmium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Cation-transporting ATPase, P-type, zinc-transporting ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; heavy metal translocating P-type ATPase 2130391..2132334 Cyclobacterium marinum DSM 745 11034260 YP_004773816.1 CDS Cycma_1833 NC_015914.1 2132342 2132914 D PFAM: Pyridoxamine 5'-phosphate oxidase; InterPro IPR011576; KEGG: fbc:FB2170_15881 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2132342..2132914 Cyclobacterium marinum DSM 745 11034261 YP_004773817.1 CDS Cycma_1834 NC_015914.1 2133012 2133968 D PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR006311; KEGG: rmr:Rmar_1743 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2; xylose isomerase domain-containing protein 2133012..2133968 Cyclobacterium marinum DSM 745 11034262 YP_004773818.1 CDS Cycma_1835 NC_015914.1 2134340 2135872 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1607 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 2134340..2135872 Cyclobacterium marinum DSM 745 11034263 YP_004773819.1 CDS Cycma_1836 NC_015914.1 2135980 2136561 R PFAM: Uncharacterised ACR, YkgG family COG1556; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: psl:Psta_3385 hypothetical protein; PFAM: Protein of unknown function DUF162; SPTR: uncharacterized protein; lactate utilization protein B/C complement(2135980..2136561) Cyclobacterium marinum DSM 745 11034264 YP_004773820.1 CDS Cycma_1837 NC_015914.1 2136558 2137934 R PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741; KEGG: dfe:Dfer_5745 protein of unknown function DUF162; PFAM: Protein of unknown function DUF162; SPTR: iron-sulfur cluster binding protein; lactate utilization protein B/C complement(2136558..2137934) Cyclobacterium marinum DSM 745 11034265 YP_004773821.1 CDS Cycma_1838 NC_015914.1 2137936 2138676 R PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: phe:Phep_2946 hypothetical protein; PFAM: Cysteine-rich region, CCG; SPTR: Oxidoreductase, iron-sulphur binding subunit; hypothetical protein complement(2137936..2138676) Cyclobacterium marinum DSM 745 11034266 YP_004773822.1 CDS Cycma_1839 NC_015914.1 2139153 2140289 D KEGG: osp:Odosp_2226 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2139153..2140289 Cyclobacterium marinum DSM 745 11034267 YP_004773823.1 CDS Cycma_1840 NC_015914.1 2140286 2141449 D KEGG: ppn:Palpr_1566 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2140286..2141449 Cyclobacterium marinum DSM 745 11034268 YP_004773824.1 CDS Cycma_1841 NC_015914.1 2141632 2142345 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: mtt:Ftrac_2792 uroporphyrin-III c/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(2141632..2142345) Cyclobacterium marinum DSM 745 11034269 YP_004773825.1 CDS Cycma_1842 NC_015914.1 2142370 2142591 D PFAM: Protein of unknown function (DUF2905); KEGG: gbm:Gbem_3356 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 2142370..2142591 Cyclobacterium marinum DSM 745 11034270 YP_004773826.1 CDS Cycma_1843 NC_015914.1 2142955 2143107 R hypothetical protein complement(2142955..2143107) Cyclobacterium marinum DSM 745 11034271 YP_004773827.1 CDS Cycma_1844 NC_015914.1 2143113 2143562 D PFAM: Transposase IS200 like; InterPro IPR002686; KEGG: sli:Slin_4541 transposase IS200-like protein; PFAM: Transposase IS200-like; SPTR: Transposase IS200-like protein; transposase IS200-family protein 2143113..2143562 Cyclobacterium marinum DSM 745 11034272 YP_004773828.1 CDS Cycma_1845 NC_015914.1 2143918 2144679 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: mtt:Ftrac_1787 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase; alpha/beta hydrolase complement(2143918..2144679) Cyclobacterium marinum DSM 745 11034273 YP_004773829.1 CDS Cycma_1846 NC_015914.1 2144693 2145409 R PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: mtt:Ftrac_1784 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; pyridoxine 5'-phosphate synthase complement(2144693..2145409) Cyclobacterium marinum DSM 745 11034274 YP_004773830.1 CDS Cycma_1847 NC_015914.1 2145555 2146007 D PFAM: Yqey-like protein; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: dfe:Dfer_4729 hypothetical protein; SPTR: YqeY family protein; hypothetical protein 2145555..2146007 Cyclobacterium marinum DSM 745 11034275 YP_004773831.1 CDS Cycma_1848 NC_015914.1 2146015 2146560 D PFAM: Colicin V production protein; InterPro IPR003825; KEGG: mtt:Ftrac_1782 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein; colicin V production protein 2146015..2146560 Cyclobacterium marinum DSM 745 11034276 YP_004773832.1 CDS Cycma_1849 NC_015914.1 2146544 2147134 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991:IPR006221; KEGG: sli:Slin_0655 glutamine amidotransferase; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Anthranilate synthase component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 2146544..2147134 Cyclobacterium marinum DSM 745 11034277 YP_004773833.1 CDS Cycma_1850 NC_015914.1 2147267 2147932 D InterPro IPR000644; KEGG: mtt:Ftrac_1779 cbs domain containing protein; PFAM: Cystathionine beta-synthase, core; SPTR: CBS domain-containing protein; hypothetical protein 2147267..2147932 Cyclobacterium marinum DSM 745 11034278 YP_004773834.1 CDS Cycma_1851 NC_015914.1 2147939 2148814 D PFAM: ATP-NAD kinase; COGs: COG0061 sugar kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; InterPro IPR002504; KEGG: chu:CHU_3408 inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase 2147939..2148814 Cyclobacterium marinum DSM 745 11034279 YP_004773835.1 CDS Cycma_1852 NC_015914.1 2148889 2149647 D KEGG: mtt:Ftrac_1776 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2148889..2149647 Cyclobacterium marinum DSM 745 11034280 YP_004773836.1 CDS Cycma_1853 NC_015914.1 2149730 2150473 D PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP: Undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: sli:Slin_4433 undecaprenyl diphosphate synthase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; SPTR: Di-trans,poly-cis-decaprenylcistransferase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; UDP pyrophosphate synthase 2149730..2150473 Cyclobacterium marinum DSM 745 11034281 YP_004773837.1 CDS Cycma_1854 NC_015914.1 2150561 2153272 D PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: mtt:Ftrac_1774 outer membrane protein assembly complex, yaet protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: outer membrane protein; surface antigen (D15) 2150561..2153272 Cyclobacterium marinum DSM 745 11034282 YP_004773838.1 CDS Cycma_1855 NC_015914.1 2153275 2153799 D PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: mtt:Ftrac_1773 outer membrane chaperone skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, OmpH family; outer membrane chaperone Skp 2153275..2153799 Cyclobacterium marinum DSM 745 11034283 YP_004773839.1 CDS Cycma_1856 NC_015914.1 2153821 2154363 D PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: mtt:Ftrac_1772 outer membrane chaperone skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, OmpH family; outer membrane chaperone Skp 2153821..2154363 Cyclobacterium marinum DSM 745 11034284 YP_004773840.1 CDS Cycma_1857 NC_015914.1 2154451 2154834 D hypothetical protein 2154451..2154834 Cyclobacterium marinum DSM 745 11034285 YP_004773841.1 CDS Cycma_1858 NC_015914.1 2154948 2156075 R PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: fbc:FB2170_11436 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(2154948..2156075) Cyclobacterium marinum DSM 745 11034286 YP_004773842.1 CDS Cycma_1859 NC_015914.1 2156311 2156670 D SPTR: uncharacterized protein; hypothetical protein 2156311..2156670 Cyclobacterium marinum DSM 745 11034287 YP_004773843.1 CDS Cycma_1860 NC_015914.1 2156735 2157511 R InterPro IPR002711:IPR003615; KEGG: HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: Probable restriction endonuclease; HNH endonuclease complement(2156735..2157511) Cyclobacterium marinum DSM 745 11034288 YP_004773844.1 CDS Cycma_1861 NC_015914.1 2157828 2158286 D PFAM: RNase H; COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: chu:CHU_2706 ribonuclease HI; PFAM: Ribonuclease H; SPTR: Ribonuclease HI; ribonuclease H 2157828..2158286 Cyclobacterium marinum DSM 745 11034289 YP_004773845.1 CDS Cycma_1862 NC_015914.1 2158286 2159011 D PFAM: Methyltransferase small domain; TIGRFAM: methyltransferase, FkbM family; COGs: COG4123 O-methyltransferase; InterPro IPR007848; KEGG: pha:PSHAa0511 SAM-dependent methyltransferase(YfiC); PFAM: Methyltransferase small; SPTR: SmtA protein; methyltransferase small 2158286..2159011 Cyclobacterium marinum DSM 745 11034290 YP_004773846.1 CDS Cycma_1863 NC_015914.1 2159065 2160966 R PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: bvu:BVU_0133 glycoside hydrolase; PFAM: Glycoside hydrolase 97; SPTR: Glycoside hydrolase 97 protein; glycoside hydrolase complement(2159065..2160966) Cyclobacterium marinum DSM 745 11034291 YP_004773847.1 CDS Cycma_1864 NC_015914.1 2161053 2161955 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sli:Slin_4249 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2161053..2161955) Cyclobacterium marinum DSM 745 11034292 YP_004773848.1 CDS Cycma_1865 NC_015914.1 2161988 2163406 R PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine dehydratase, iron-sulfur-dependent, beta subunit; COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130:IPR004644; KEGG: ran:Riean_1690 L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; SPTR: L-serine dehydratase 1; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; L-serine dehydratase 1 complement(2161988..2163406) Cyclobacterium marinum DSM 745 11034293 YP_004773849.1 CDS Cycma_1866 NC_015914.1 2163516 2163860 R KEGG: nit:NAL212_2265 hypothetical protein; SPTR: Glucose-6-phosphate 1-dehydrogenase; hypothetical protein complement(2163516..2163860) Cyclobacterium marinum DSM 745 11034294 YP_004773850.1 CDS Cycma_1867 NC_015914.1 2164011 2166593 R PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR001440:IPR019734; KEGG: cts:Ctha_1368 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; hypothetical protein complement(2164011..2166593) Cyclobacterium marinum DSM 745 11034295 YP_004773851.1 CDS Cycma_1868 NC_015914.1 2166753 2167028 R PFAM: Protein of unknown function (DUF2442); InterPro IPR018841; KEGG: nhl:Nhal_0244 hypothetical protein; PFAM: Protein of unknown function DUF2442; SPTR: uncharacterized protein; hypothetical protein complement(2166753..2167028) Cyclobacterium marinum DSM 745 11034296 YP_004773852.1 CDS Cycma_1869 NC_015914.1 2167028 2167285 R KEGG: mar:MAE_17860 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2167028..2167285) Cyclobacterium marinum DSM 745 11034297 YP_004773853.1 CDS Cycma_1870 NC_015914.1 2167529 2168227 R PFAM: DNA alkylation repair enzyme; COGs: COG4912 DNA alkylation repair protein; KEGG: det:DET0581 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2167529..2168227) Cyclobacterium marinum DSM 745 11034298 YP_004773854.1 CDS Cycma_1871 NC_015914.1 2168318 2169649 R PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: gfo:GFO_2757 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: uncharacterized protein; peptidase S13 D-Ala-D-Ala carboxypeptidase C complement(2168318..2169649) Cyclobacterium marinum DSM 745 11034299 YP_004773855.1 CDS Cycma_1872 NC_015914.1 2169946 2171349 R KEGG: gfo:GFO_2755 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2169946..2171349) Cyclobacterium marinum DSM 745 11034300 YP_004773856.1 CDS Cycma_1873 NC_015914.1 2171361 2174456 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_2756 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(2171361..2174456) Cyclobacterium marinum DSM 745 11034301 YP_004773857.1 CDS Cycma_1874 NC_015914.1 2175067 2175555 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; COGs: COG0295 Cytidine deaminase; InterPro IPR002125; KEGG: cat:CA2559_05460 cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase; CMP/dCMP deaminase zinc-binding protein 2175067..2175555 Cyclobacterium marinum DSM 745 11034302 YP_004773858.1 CDS Cycma_1875 NC_015914.1 2175555 2176202 D PFAM: Phospholipase/Carboxylesterase; InterPro IPR003140; KEGG: mtt:Ftrac_3743 phospholipase/carboxylesterase; PFAM: Phospholipase/carboxylesterase; SPTR: esterase/lipase; phospholipase/carboxylesterase 2175555..2176202 Cyclobacterium marinum DSM 745 11034303 YP_004773859.1 CDS Cycma_1876 NC_015914.1 2176213 2177457 D PFAM: Polysaccharide pyruvyl transferase; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: sli:Slin_5831 3-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase, glycosyltransferase 30 protein; 3-deoxy-D-manno-octulosonic-acid transferase 2176213..2177457 Cyclobacterium marinum DSM 745 11034304 YP_004773860.1 CDS Cycma_1877 NC_015914.1 2177454 2178377 D PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; COGs: COG1162 GTPase; HAMAP: ribosome biogenesis GTPase RsgA; InterPro IPR004881; KEGG: mtt:Ftrac_3140 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; SPTR: ribosome biogenesis GTPase RsgA; TIGRFAM: GTPase EngC; ribosome biogenesis GTPase RsgA 2177454..2178377 Cyclobacterium marinum DSM 745 11034305 YP_004773861.1 CDS Cycma_1878 NC_015914.1 2178484 2178990 D PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: dfe:Dfer_4675 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase/pyrimidine operon attenuation protein; phosphoribosyltransferase 2178484..2178990 Cyclobacterium marinum DSM 745 11034306 YP_004773862.1 CDS Cycma_1879 NC_015914.1 2178992 2179813 D PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: mtt:Ftrac_3555 ketopantoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; manually curated; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2178992..2179813 Cyclobacterium marinum DSM 745 11034307 YP_004773863.1 CDS Cycma_1880 NC_015914.1 2180038 2182272 D PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: mtt:Ftrac_3556 isocitrate dehydrogenase, nADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 2180038..2182272 Cyclobacterium marinum DSM 745 11034308 YP_004773864.1 CDS Cycma_1881 NC_015914.1 2182402 2183139 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: psn:Pedsa_3792 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein complement(2182402..2183139) Cyclobacterium marinum DSM 745 11034309 YP_004773865.1 CDS Cycma_1882 NC_015914.1 2183146 2183577 R PFAM: Cytochrome c; COGs: COG4654 Cytochrome c551/c552; InterPro IPR003088; KEGG: cpi:Cpin_7278 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c family protein; cytochrome c class I complement(2183146..2183577) Cyclobacterium marinum DSM 745 11034310 YP_004773866.1 CDS Cycma_1883 NC_015914.1 2183595 2184650 R PFAM: AP endonuclease 2 C terminus; Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: cpi:Cpin_7279 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: IolE protein; xylose isomerase domain-containing protein complement(2183595..2184650) Cyclobacterium marinum DSM 745 11034311 YP_004773867.1 CDS Cycma_1884 NC_015914.1 2184666 2185832 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: psn:Pedsa_3789 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein complement(2184666..2185832) Cyclobacterium marinum DSM 745 11034312 YP_004773868.1 CDS Cycma_1885 NC_015914.1 2186083 2187357 D PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; InterPro IPR004740; KEGG: psn:Pedsa_3793 nucleoside permease; PFAM: Nucleoside:H+ symporter; SPTR: nucleoside permease; manually curated; nucleoside:H symporter 2186083..2187357 Cyclobacterium marinum DSM 745 11034313 YP_004773869.1 CDS Cycma_1886 NC_015914.1 2187498 2189177 D PFAM: FAD binding domain; GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: FAD dependent oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family; glucose-methanol-choline oxidoreductase 2187498..2189177 Cyclobacterium marinum DSM 745 11034314 YP_004773870.1 CDS Cycma_1887 NC_015914.1 2189204 2189764 D KEGG: shg:Sph21_3640 twin-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal; manually curated; twin-arginine translocation pathway signal 2189204..2189764 Cyclobacterium marinum DSM 745 11034315 YP_004773871.1 CDS Cycma_1888 NC_015914.1 2189882 2190607 D KEGG: shg:Sph21_4771 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2189882..2190607 Cyclobacterium marinum DSM 745 11034316 YP_004773872.1 CDS Cycma_1889 NC_015914.1 2191061 2191786 R PFAM: Bacterial SH3 domain; InterPro IPR010466:IPR003646; KEGG: chu:CHU_2804 hypothetical protein; PFAM: Protein of unknown function DUF1058; SMART: Bacterial SH3-like region; SPTR: uncharacterized protein; hypothetical protein complement(2191061..2191786) Cyclobacterium marinum DSM 745 11034317 YP_004773873.1 CDS Cycma_1890 NC_015914.1 2192280 2194106 R PFAM: SusD family; InterPro IPR012944; KEGG: gau:GAU_2998 outer membrane protein; PFAM: RagB/SusD; SPTR: outer membrane protein; RagB/SusD domain-containing protein complement(2192280..2194106) Cyclobacterium marinum DSM 745 11034319 YP_004773874.1 CDS Cycma_1891 NC_015914.1 2194127 2197252 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1920 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein; TonB-dependent receptor plug complement(2194127..2197252) Cyclobacterium marinum DSM 745 11034320 YP_004773875.1 CDS Cycma_1892 NC_015914.1 2197896 2201102 D PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011444; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1549; SPTR: uncharacterized protein; hypothetical protein 2197896..2201102 Cyclobacterium marinum DSM 745 11034321 YP_004773876.1 CDS Cycma_1893 NC_015914.1 2201109 2202602 D PFAM: Protein of unknown function (DUF1501); InterPro IPR010869:IPR006311; KEGG: cly:Celly_0452 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; hypothetical protein 2201109..2202602 Cyclobacterium marinum DSM 745 11034322 YP_004773877.1 CDS Cycma_1894 NC_015914.1 2202664 2203272 R hypothetical protein complement(2202664..2203272) Cyclobacterium marinum DSM 745 11034323 YP_004773878.1 CDS Cycma_1895 NC_015914.1 2203282 2203824 R hypothetical protein complement(2203282..2203824) Cyclobacterium marinum DSM 745 11034324 YP_004773879.1 CDS Cycma_1896 NC_015914.1 2203943 2205253 R PFAM: Predicted membrane protein (DUF2254); COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: cyc:PCC7424_1901 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR: uncharacterized protein; hypothetical protein complement(2203943..2205253) Cyclobacterium marinum DSM 745 11034325 YP_004773880.1 CDS Cycma_1897 NC_015914.1 2205462 2205938 R KEGG: mtt:Ftrac_3138 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2205462..2205938) Cyclobacterium marinum DSM 745 11034326 YP_004773881.1 CDS Cycma_1898 NC_015914.1 2205950 2206336 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: mtt:Ftrac_1261 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2205950..2206336) Cyclobacterium marinum DSM 745 11034327 YP_004773882.1 CDS Cycma_1899 NC_015914.1 2206754 2207776 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: NADPH:quinone reductase; alcohol dehydrogenase complement(2206754..2207776) Cyclobacterium marinum DSM 745 11034328 YP_004773883.1 CDS Cycma_1900 NC_015914.1 2207972 2209192 D PFAM: Alanine racemase, N-terminal domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608:IPR006311; KEGG: llo:LLO_2703 alanine racemase; PFAM: Alanine racemase, N-terminal; SPTR: Low-specificity threonine aldolase; alanine racemase 2207972..2209192 Cyclobacterium marinum DSM 745 11034329 YP_004773884.1 CDS Cycma_1901 NC_015914.1 2209362 2210588 R PFAM: Sodium/hydrogen exchanger family; InterPro IPR006153; KEGG: lby:Lbys_1407 sodium/proton antiporter, cpa1 family; PFAM: Cation/H+ exchanger; SPTR: Na(+)/H(+) exchanger family protein; sodium/hydrogen exchanger complement(2209362..2210588) Cyclobacterium marinum DSM 745 11034330 YP_004773885.1 CDS Cycma_1902 NC_015914.1 2210788 2213067 D SPTR: uncharacterized protein; hypothetical protein 2210788..2213067 Cyclobacterium marinum DSM 745 11034331 YP_004773886.1 CDS Cycma_1903 NC_015914.1 2213177 2215045 R TIGRFAM: conserved hypothetical protein; InterPro IPR011935; KEGG: zpr:ZPR_2072 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02231; hypothetical protein complement(2213177..2215045) Cyclobacterium marinum DSM 745 11034332 YP_004773887.1 CDS Cycma_1904 NC_015914.1 2215443 2217743 D PFAM: Acetyl xylan esterase (AXE1); BAAT / Acyl-CoA thioester hydrolase C terminal; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: mbr:MONBRDRAFT_27421 hypothetical protein; SPTR: Predicted protein; hypothetical protein 2215443..2217743 Cyclobacterium marinum DSM 745 11034333 YP_004773888.1 CDS Cycma_1905 NC_015914.1 2217785 2219089 D PFAM: Endoribonuclease L-PSP; COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: phe:Phep_0334 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; endoribonuclease L-PSP 2217785..2219089 Cyclobacterium marinum DSM 745 11034334 YP_004773889.1 CDS Cycma_1906 NC_015914.1 2219349 2220497 R KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2219349..2220497) Cyclobacterium marinum DSM 745 11034335 YP_004773890.1 CDS Cycma_1907 NC_015914.1 2220552 2221703 R KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2220552..2221703) Cyclobacterium marinum DSM 745 11034336 YP_004773891.1 CDS Cycma_1908 NC_015914.1 2222159 2222380 D PFAM: addiction module component; TIGRFAM: addiction module component, TIGR02574 family; InterPro IPR013406; PFAM: Addiction module component, CHP02574; addiction module family protein 2222159..2222380 Cyclobacterium marinum DSM 745 11034337 YP_004773892.1 CDS Cycma_1909 NC_015914.1 2222377 2222679 D PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: dfe:Dfer_3423 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system; plasmid stabilization system 2222377..2222679 Cyclobacterium marinum DSM 745 11034338 YP_004773893.1 CDS Cycma_1911 NC_015914.1 2223213 2224349 R KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2223213..2224349) Cyclobacterium marinum DSM 745 11034340 YP_004773894.1 CDS Cycma_1912 NC_015914.1 2224376 2224525 R hypothetical protein complement(2224376..2224525) Cyclobacterium marinum DSM 745 11034341 YP_004773895.1 CDS Cycma_1913 NC_015914.1 2224790 2226208 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: Steryl-sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 2224790..2226208 Cyclobacterium marinum DSM 745 11034342 YP_004773896.1 CDS Cycma_1914 NC_015914.1 2226748 2227956 R PFAM: PHP domain; InterPro IPR004013; KEGG: fbc:FB2170_06425 hypothetical protein; PFAM: PHP, C-terminal; SPTR: uncharacterized protein; PHP domain-containing protein complement(2226748..2227956) Cyclobacterium marinum DSM 745 11034343 YP_004773897.1 CDS Cycma_1915 NC_015914.1 2228112 2228558 D PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; InterPro IPR019052; KEGG: gfo:GFO_3029 hypothetical protein; PFAM: Protein of unknown function DUF2383; SPTR: uncharacterized protein; hypothetical protein 2228112..2228558 Cyclobacterium marinum DSM 745 11034344 YP_004773898.1 CDS Cycma_1916 NC_015914.1 2228722 2230056 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: shg:Sph21_0520 processing peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase, M16B family; peptidase M16 domain-containing protein 2228722..2230056 Cyclobacterium marinum DSM 745 11034345 YP_004773899.1 CDS Cycma_1917 NC_015914.1 2230076 2232124 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: shg:Sph21_0519 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase M16; peptidase M16 domain-containing protein 2230076..2232124 Cyclobacterium marinum DSM 745 11034346 YP_004773900.1 CDS Cycma_1919 NC_015914.1 2232924 2234567 R PFAM: M61 glycyl aminopeptidase; COGs: COG3975 protease with the C-terminal PDZ domain; InterPro IPR007963; KEGG: dfe:Dfer_4157 peptidase M61 domain protein; PFAM: Peptidase M61; SPTR: protease; peptidase M61 domain-containing protein complement(2232924..2234567) Cyclobacterium marinum DSM 745 11034348 YP_004773901.1 CDS Cycma_1920 NC_015914.1 2234685 2234843 D PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; 50S ribosomal protein L34 2234685..2234843 Cyclobacterium marinum DSM 745 11034349 YP_004773902.1 CDS Cycma_1921 NC_015914.1 2234888 2235262 D PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: mtt:Ftrac_1677 ribonuclease P protein component; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; ribonuclease P protein component 2234888..2235262 Cyclobacterium marinum DSM 745 11034350 YP_004773903.1 CDS Cycma_1922 NC_015914.1 2235259 2236920 D PFAM: Peptidase S41; TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR005151:IPR001478:IPR004447; KEGG: chu:CHU_0098 C-terminal processing peptidase-3; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl protease; TIGRFAM: Peptidase S41A, C-terminal protease; carboxyl-terminal protease 2235259..2236920 Cyclobacterium marinum DSM 745 11034351 YP_004773904.1 CDS Cycma_1923 NC_015914.1 2237104 2237820 D PFAM: Glycoprotease; TIGRFAM: universal bacterial protein YeaZ; COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905; KEGG: mtt:Ftrac_1674 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Glycoprotease; TIGRFAM: universal protein YeaZ; hypothetical protein 2237104..2237820 Cyclobacterium marinum DSM 745 11034352 YP_004773905.1 CDS Cycma_1924 NC_015914.1 2237817 2238329 D PFAM: Protein of unknown function (DUF2480); InterPro IPR018914; KEGG: cao:Celal_1619 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: uncharacterized protein; hypothetical protein 2237817..2238329 Cyclobacterium marinum DSM 745 11034353 YP_004773906.1 CDS Cycma_1925 NC_015914.1 2244992 2245786 R PFAM: Domain of unknown function (DUF1961); SPTR: uncharacterized protein; hypothetical protein complement(2244992..2245786) Cyclobacterium marinum DSM 745 11035648 YP_004773907.1 CDS Cycma_1926 NC_015914.1 2246897 2247910 D PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: ppp:PHYPADRAFT_201214 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: Predicted protein; amidohydrolase 2246897..2247910 Cyclobacterium marinum DSM 745 11035649 YP_004773908.1 CDS Cycma_1927 NC_015914.1 2248196 2248651 R PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: heat shock protein Hsp20; PFAM: Heat shock protein Hsp20; SPTR: HSP20-like chaperone; heat shock protein Hsp20 complement(2248196..2248651) Cyclobacterium marinum DSM 745 11035650 YP_004773909.1 CDS Cycma_1928 NC_015914.1 2249008 2249412 R hypothetical protein complement(2249008..2249412) Cyclobacterium marinum DSM 745 11035651 YP_004773910.1 CDS Cycma_1929 NC_015914.1 2249749 2249901 R hypothetical protein complement(2249749..2249901) Cyclobacterium marinum DSM 745 11035652 YP_004773911.1 CDS Cycma_1932 NC_015914.1 2250311 2250460 R TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; InterPro IPR006311; hypothetical protein complement(2250311..2250460) Cyclobacterium marinum DSM 745 11035655 YP_004773912.1 CDS Cycma_1933 NC_015914.1 2250490 2251548 R PFAM: Amidohydrolase; InterPro IPR006992; KEGG: cak:Caul_0314 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(2250490..2251548) Cyclobacterium marinum DSM 745 11035656 YP_004773913.1 CDS Cycma_1934 NC_015914.1 2251792 2251953 D hypothetical protein 2251792..2251953 Cyclobacterium marinum DSM 745 11035657 YP_004773914.1 CDS Cycma_1935 NC_015914.1 2252067 2253341 R PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: hel:HELO_1150 TRAP transporter large transmembrane protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP-type transport system permease large protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(2252067..2253341) Cyclobacterium marinum DSM 745 11035658 YP_004773915.1 CDS Cycma_1936 NC_015914.1 2253338 2253799 R PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: bcl:ABC4045 TRAP-type transport system permease small protein; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ complement(2253338..2253799) Cyclobacterium marinum DSM 745 11035659 YP_004773916.1 CDS Cycma_1937 NC_015914.1 2253796 2254788 R PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: hel:HELO_1148 TRAP transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP complement(2253796..2254788) Cyclobacterium marinum DSM 745 11035660 YP_004773917.1 CDS Cycma_1938 NC_015914.1 2254866 2260118 R KEGG: mtt:Ftrac_2139 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2254866..2260118) Cyclobacterium marinum DSM 745 11035661 YP_004773918.1 CDS Cycma_1939 NC_015914.1 2260223 2261212 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR012280:IPR005986; KEGG: mtt:Ftrac_2138 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; aspartate-semialdehyde dehydrogenase 2260223..2261212 Cyclobacterium marinum DSM 745 11035662 YP_004773919.1 CDS Cycma_1940 NC_015914.1 2261246 2262433 D KEGG: dfe:Dfer_4993 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2261246..2262433 Cyclobacterium marinum DSM 745 11035663 YP_004773920.1 CDS Cycma_1941 NC_015914.1 2262919 2265957 R PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR006847:IPR000795:IPR004161:IPR000178:IPR 005225; KEGG: mtt:Ftrac_2449 bacterial translation initiation factor 2 (bif-2); PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; translation initiation factor IF-2 complement(2262919..2265957) Cyclobacterium marinum DSM 745 11035664 YP_004773921.1 CDS Cycma_1942 NC_015914.1 2266028 2267272 R PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA; COGs: COG0195 Transcription elongation factor; InterPro IPR013735:IPR010213; KEGG: mtt:Ftrac_2448 NusA antitermination factor; PFAM: Transcription factor NusA, N-terminal; SPTR: Transcription termination factor NusA; TIGRFAM: Transcription termination factor NusA; NusA antitermination factor complement(2266028..2267272) Cyclobacterium marinum DSM 745 11035665 YP_004773922.1 CDS Cycma_1943 NC_015914.1 2267278 2267748 R PFAM: Uncharacterised BCR, YhbC family COG0779; HAMAP: Uncharacterised protein family UPF0090, bacteria; InterPro IPR003728:IPR020790; KEGG: mtt:Ftrac_2447 hypothetical protein; PFAM: Uncharacterised protein family UPF0090; SPTR: Ribosome maturation factor rimP; ribosome maturation factor rimP complement(2267278..2267748) Cyclobacterium marinum DSM 745 11035666 YP_004773923.1 CDS Cycma_1944 NC_015914.1 2267907 2269403 D PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803:IPR015273:IPR002308; KEGG: chu:CHU_3418 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; SPTR: Cysteine--tRNA ligase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; cysteinyl-tRNA synthetase 2267907..2269403 Cyclobacterium marinum DSM 745 11035667 YP_004773924.1 CDS Cycma_1945 NC_015914.1 2269393 2270385 D PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: mtt:Ftrac_2480 peptidase M28; PFAM: Peptidase M28; SPTR: Glutamine cyclotransferase-related protein; peptidase M28 2269393..2270385 Cyclobacterium marinum DSM 745 11035668 YP_004773925.1 CDS Cycma_1946 NC_015914.1 2270409 2271563 D PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; COGs: COG0153 Galactokinase; InterPro IPR019539:IPR006204:IPR013750:IPR000705; KEGG: cao:Celal_0463 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; SPTR: Galactokinase; TIGRFAM: Galactokinase; galactokinase 2270409..2271563 Cyclobacterium marinum DSM 745 11035669 YP_004773926.1 CDS Cycma_1947 NC_015914.1 2272408 2273295 D KEGG: sdn:Sden_0879 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2272408..2273295 Cyclobacterium marinum DSM 745 11035670 YP_004773927.1 CDS Cycma_1948 NC_015914.1 2273289 2273420 D hypothetical protein 2273289..2273420 Cyclobacterium marinum DSM 745 11035671 YP_004773928.1 CDS Cycma_1949 NC_015914.1 2273461 2274828 D KEGG: sbn:Sbal195_1991 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2273461..2274828 Cyclobacterium marinum DSM 745 11035672 YP_004773929.1 CDS Cycma_1950 NC_015914.1 2274943 2275341 R hypothetical protein complement(2274943..2275341) Cyclobacterium marinum DSM 745 11035673 YP_004773930.1 CDS Cycma_1951 NC_015914.1 2275664 2276050 R PFAM: Preprotein translocase subunit SecB; KEGG: ppn:Palpr_0882 protein export chaperone SecB; SPTR: Protein export chaperone SecB; protein export chaperone SecB complement(2275664..2276050) Cyclobacterium marinum DSM 745 11035674 YP_004773931.1 CDS Cycma_1952 NC_015914.1 2276052 2276276 R hypothetical protein complement(2276052..2276276) Cyclobacterium marinum DSM 745 11035675 YP_004773932.1 CDS Cycma_1953 NC_015914.1 2276263 2276838 R KEGG: csc:Csac_0615 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2276263..2276838) Cyclobacterium marinum DSM 745 11035676 YP_004773933.1 CDS Cycma_1954 NC_015914.1 2277433 2277801 D PFAM: Phage derived protein Gp49-like (DUF891); InterPro IPR009241; KEGG: cao:Celal_3303 hypothetical protein; PFAM: Protein of unknown function DUF891; SPTR: uncharacterized protein; hypothetical protein 2277433..2277801 Cyclobacterium marinum DSM 745 11035677 YP_004773934.1 CDS Cycma_1955 NC_015914.1 2277798 2278088 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: wvi:Weevi_0144 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2277798..2278088 Cyclobacterium marinum DSM 745 11035678 YP_004773935.1 CDS Cycma_1956 NC_015914.1 2278253 2278741 D hypothetical protein 2278253..2278741 Cyclobacterium marinum DSM 745 11035679 YP_004773936.1 CDS Cycma_1957 NC_015914.1 2279016 2279138 D hypothetical protein 2279016..2279138 Cyclobacterium marinum DSM 745 11035680 YP_004773937.1 CDS Cycma_1959 NC_015914.1 2280667 2281503 D PFAM: LytTr DNA-binding domain; InterPro IPR007492; KEGG: fbc:FB2170_11076 two-component response regulator; PFAM: LytTr DNA-binding region; SPTR: two-component response regulator; LytTr DNA-binding protein 2280667..2281503 Cyclobacterium marinum DSM 745 11035682 YP_004773938.1 CDS Cycma_1960 NC_015914.1 2281637 2282290 D PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: mtt:Ftrac_1248 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; abortive infection protein 2281637..2282290 Cyclobacterium marinum DSM 745 11035683 YP_004773939.1 CDS Cycma_1961 NC_015914.1 2283056 2283298 D KEGG: mtt:Ftrac_0600 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2283056..2283298 Cyclobacterium marinum DSM 745 11035684 YP_004773940.1 CDS Cycma_1962 NC_015914.1 2283289 2283606 D PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: mtt:Ftrac_0599 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Hypothetical plasmid-stabilisation protein; plasmid stabilization system 2283289..2283606 Cyclobacterium marinum DSM 745 11035685 YP_004773941.1 CDS Cycma_1963 NC_015914.1 2284384 2284854 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2284384..2284854 Cyclobacterium marinum DSM 745 11035686 YP_004773942.1 CDS Cycma_1964 NC_015914.1 2284844 2285377 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2284844..2285377 Cyclobacterium marinum DSM 745 11035687 YP_004773943.1 CDS Cycma_1965 NC_015914.1 2285969 2286970 D InterPro IPR001258; KEGG: gfo:GFO_0830 hypothetical protein; PFAM: NHL repeat; SPTR: uncharacterized protein; NHL repeat containing protein 2285969..2286970 Cyclobacterium marinum DSM 745 11035688 YP_004773944.1 CDS Cycma_1966 NC_015914.1 2287716 2288369 D PFAM: Helix-turn-helix; RDD family; InterPro IPR001387:IPR010432; KEGG: ppn:Palpr_2307 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; RDD; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2287716..2288369 Cyclobacterium marinum DSM 745 11035689 YP_004773945.1 CDS Cycma_1967 NC_015914.1 2288383 2288511 D hypothetical protein 2288383..2288511 Cyclobacterium marinum DSM 745 11035690 YP_004773946.1 CDS Cycma_1968 NC_015914.1 2288993 2290561 D KEGG: cat:CA2559_03690 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2288993..2290561 Cyclobacterium marinum DSM 745 11035691 YP_004773947.1 CDS Cycma_1969 NC_015914.1 2290715 2291113 D PFAM: OsmC-like protein; InterPro IPR003718; KEGG: cao:Celal_0708 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: uncharacterized protein; OsmC family protein 2290715..2291113 Cyclobacterium marinum DSM 745 11035692 YP_004773948.1 CDS Cycma_1970 NC_015914.1 2291208 2291837 R hypothetical protein complement(2291208..2291837) Cyclobacterium marinum DSM 745 11035693 YP_004773949.1 CDS Cycma_1971 NC_015914.1 2292140 2293591 D PFAM: Domain of unknown function (DUF303); InterPro IPR005181; KEGG: cpi:Cpin_1583 sialate O-acetylesterase; PFAM: Protein of unknown function DUF303, acetylesterase SPTR: Sialic acid-specific 9-O-acetylesterase; hypothetical protein 2292140..2293591 Cyclobacterium marinum DSM 745 11035694 YP_004773950.1 CDS Cycma_1972 NC_015914.1 2293678 2294775 R PFAM: Aminotransferase class-V; TIGRFAM: 2-aminoethylphosphonate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase; COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192:IPR012703:IPR017688; KEGG: pjd:Pjdr2_4350 2-aminoethylphosphonate/pyruvate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: 2-aminoethylphosphonate--pyruvate transaminase; TIGRFAM: 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase complement(2293678..2294775) Cyclobacterium marinum DSM 745 11035695 YP_004773951.1 CDS Cycma_1973 NC_015914.1 2294934 2295866 R PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase; COGs: COG4301 conserved hypothetical protein; InterPro IPR019257:IPR017804; KEGG: shg:Sph21_2565 protein of unknown function DUF2260; PFAM: Protein of unknown function DUF2260; SPTR: uncharacterized protein; TIGRFAM: Methyltransferase-like; methyltransferase complement(2294934..2295866) Cyclobacterium marinum DSM 745 11035696 YP_004773952.1 CDS Cycma_1974 NC_015914.1 2295863 2297053 R PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR017806; KEGG: cly:Celly_3135 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03440; hypothetical protein complement(2295863..2297053) Cyclobacterium marinum DSM 745 11035697 YP_004773953.1 CDS Cycma_1975 NC_015914.1 2297165 2297746 R PFAM: Endoribonuclease L-PSP; COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: fbc:FB2170_04510 transcription regulator; PFAM: Endoribonuclease L-PSP; SPTR: Transcription regulator; endoribonuclease L-PSP complement(2297165..2297746) Cyclobacterium marinum DSM 745 11035698 YP_004773954.1 CDS Cycma_1976 NC_015914.1 2297792 2299411 R PFAM: Aminotransferase class-V; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR000192:IPR006311; KEGG: dfe:Dfer_0481 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein; class V aminotransferase complement(2297792..2299411) Cyclobacterium marinum DSM 745 11035699 YP_004773955.1 CDS Cycma_1977 NC_015914.1 2299417 2300637 R COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: dfe:Dfer_3349 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase; amidohydrolase complement(2299417..2300637) Cyclobacterium marinum DSM 745 11035700 YP_004773956.1 CDS Cycma_1978 NC_015914.1 2300650 2302023 R PFAM: Amidohydrolase; COGs: COG3964 amidohydrolase; InterPro IPR013108:IPR006680; KEGG: dfe:Dfer_3350 dihydroorotase; PFAM: Amidohydrolase 1; Amidohydrolase 3; SPTR: Amidohydrolase; amidohydrolase complement(2300650..2302023) Cyclobacterium marinum DSM 745 11035701 YP_004773957.1 CDS Cycma_1979 NC_015914.1 2302123 2303406 D PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: cao:Celal_2821 natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; SPTR: Natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 2302123..2303406 Cyclobacterium marinum DSM 745 11035702 YP_004773958.1 CDS Cycma_1980 NC_015914.1 2303811 2305565 R PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: dfe:Dfer_3348 cytochrome c class I; SPTR: Cytochrome c class I; cytochrome c class I complement(2303811..2305565) Cyclobacterium marinum DSM 745 11035703 YP_004773959.1 CDS Cycma_1981 NC_015914.1 2305956 2306111 R hypothetical protein complement(2305956..2306111) Cyclobacterium marinum DSM 745 11035704 YP_004773960.1 CDS Cycma_1982 NC_015914.1 2306137 2309205 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: phe:Phep_0328 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 2306137..2309205 Cyclobacterium marinum DSM 745 11035705 YP_004773961.1 CDS Cycma_1983 NC_015914.1 2309217 2310839 D KEGG: dfe:Dfer_4978 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2309217..2310839 Cyclobacterium marinum DSM 745 11035706 YP_004773962.1 CDS Cycma_1984 NC_015914.1 2310923 2314222 D PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: FG-GAP repeat protein; ASPIC/UnbV domain-containing protein 2310923..2314222 Cyclobacterium marinum DSM 745 11035707 YP_004773963.1 CDS Cycma_1985 NC_015914.1 2314445 2315524 R PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Sodium/bile acid symporter family protein; bile acid:sodium symporter complement(2314445..2315524) Cyclobacterium marinum DSM 745 11035708 YP_004773964.1 CDS Cycma_1986 NC_015914.1 2315531 2316601 R PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; bile acid:sodium symporter complement(2315531..2316601) Cyclobacterium marinum DSM 745 11035709 YP_004773965.1 CDS Cycma_1987 NC_015914.1 2316653 2317120 R PFAM: Endoribonuclease L-PSP; COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: shg:Sph21_2959 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; endoribonuclease L-PSP complement(2316653..2317120) Cyclobacterium marinum DSM 745 11035710 YP_004773966.1 CDS Cycma_1988 NC_015914.1 2317704 2318636 D PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: sli:Slin_3982 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: SMP-30/Gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE-like region-containing protein 2317704..2318636 Cyclobacterium marinum DSM 745 11035711 YP_004773967.1 CDS Cycma_1989 NC_015914.1 2318668 2320908 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR013656:IPR003661:IPR003594:IPR 000014:IPR001610; KEGG: mtt:Ftrac_0032 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 2318668..2320908 Cyclobacterium marinum DSM 745 11035712 YP_004773968.1 CDS Cycma_1990 NC_015914.1 2321083 2322123 D PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789:IPR000014; KEGG: cao:Celal_1933 pas/pac sensor protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; PAS; SPTR: PAS/PAC sensor protein; TIGRFAM: PAS; PAS/PAC sensor protein 2321083..2322123 Cyclobacterium marinum DSM 745 11035713 YP_004773969.1 CDS Cycma_1991 NC_015914.1 2322136 2323266 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ppn:Palpr_1148 tdp-4-KetO-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Lipopolysaccharide biosynthesis protein; DegT/DnrJ/EryC1/StrS aminotransferase complement(2322136..2323266) Cyclobacterium marinum DSM 745 11035714 YP_004773970.1 CDS Cycma_1992 NC_015914.1 2323268 2323879 R PFAM: Protein of unknown function (DUF502); COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: aas:Aasi_0164 hypothetical protein; PFAM: Protein of unknown function DUF502; SPTR: Membrane protein; hypothetical protein complement(2323268..2323879) Cyclobacterium marinum DSM 745 11035715 YP_004773971.1 CDS Cycma_1993 NC_015914.1 2323986 2324597 R PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR003667:IPR010967; KEGG: mtt:Ftrac_1550 NADH:ubiquinone oxidoreductase, subunit E; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NADH:ubiquinone oxidoreductase subunit E complement(2323986..2324597) Cyclobacterium marinum DSM 745 11035716 YP_004773972.1 CDS Cycma_1994 NC_015914.1 2324611 2325294 R PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR003667:IPR011292; KEGG: mtt:Ftrac_1551 NADH:ubiquinone oxidoreductase, subunit D; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; NADH:ubiquinone oxidoreductase subunit D complement(2324611..2325294) Cyclobacterium marinum DSM 745 11035717 YP_004773973.1 CDS Cycma_1995 NC_015914.1 2325322 2326089 R PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR007329:IPR010204; KEGG: mtt:Ftrac_1552 NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NADH:ubiquinone oxidoreductase subunit C complement(2325322..2326089) Cyclobacterium marinum DSM 745 11035718 YP_004773974.1 CDS Cycma_1996 NC_015914.1 2326076 2327278 R PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR004338:IPR010966; KEGG: mtt:Ftrac_1553 NADH:ubiquinone oxidoreductase, subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NADH:ubiquinone oxidoreductase subunit B complement(2326076..2327278) Cyclobacterium marinum DSM 745 11035719 YP_004773975.1 CDS Cycma_1997 NC_015914.1 2327284 2328645 R PFAM: NQRA C-terminal domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; InterPro IPR008703; KEGG: mtt:Ftrac_1554 NADH:ubiquinone oxidoreductase, subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: Na-translocating NADH-quinone reductase subunit A; Na(+)-translocating NADH-quinone reductase subunit A complement(2327284..2328645) Cyclobacterium marinum DSM 745 11035720 YP_004773976.1 CDS Cycma_1998 NC_015914.1 2328778 2329680 R PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: chu:CHU_0087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2; TIGRFAM: LytB protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2328778..2329680) Cyclobacterium marinum DSM 745 11035721 YP_004773977.1 CDS Cycma_1999 NC_015914.1 2329685 2330362 R PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR000623:IPR011994:IPR003136; KEGG: dfe:Dfer_5748 cytidylate kinase; PFAM: Cytidylate kinase region; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; cytidylate kinase complement(2329685..2330362) Cyclobacterium marinum DSM 745 11035722 YP_004773978.1 CDS Cycma_2000 NC_015914.1 2330522 2332156 D PFAM: Amidohydrolase; TIGRFAM: adenine deaminase; COGs: COG1001 Adenine deaminase; HAMAP: Adenine deaminase; InterPro IPR006680:IPR006679; KEGG: fps:FP1059 adenine deaminase; PFAM: Amidohydrolase 1; SPTR: Adenine deaminase; TIGRFAM: Adenine deaminase; adenine deaminase 2330522..2332156 Cyclobacterium marinum DSM 745 11035723 YP_004773979.1 CDS Cycma_2001 NC_015914.1 2332198 2333508 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_0345 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase; integral membrane sensor signal transduction histidine kinase 2332198..2333508 Cyclobacterium marinum DSM 745 11035724 YP_004773980.1 CDS Cycma_2002 NC_015914.1 2334010 2335332 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_0345 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase; integral membrane sensor signal transduction histidine kinase 2334010..2335332 Cyclobacterium marinum DSM 745 11035725 YP_004773981.1 CDS Cycma_2003 NC_015914.1 2335403 2336467 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2335403..2336467) Cyclobacterium marinum DSM 745 11035726 YP_004773982.1 CDS Cycma_2004 NC_015914.1 2336508 2337089 R PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824:IPR001075; KEGG: dfe:Dfer_4882 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; NIF system FeS cluster assembly, NifU, C-terminal; SPTR: NifU domain protein; Scaffold protein Nfu/NifU complement(2336508..2337089) Cyclobacterium marinum DSM 745 11035808 YP_004773983.1 CDS Cycma_2005 NC_015914.1 2337188 2338519 R PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: aas:Aasi_1194 hypothetical protein; PFAM: Sodium:dicarboxylate symporter; SPTR: Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family; sodium:dicarboxylate symporter complement(2337188..2338519) Cyclobacterium marinum DSM 745 11035809 YP_004773984.1 CDS Cycma_2006 NC_015914.1 2338533 2339609 R PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: mtt:Ftrac_2969 chorismate synthase; PFAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase; chorismate synthase complement(2338533..2339609) Cyclobacterium marinum DSM 745 11035810 YP_004773985.1 CDS Cycma_2007 NC_015914.1 2339613 2341058 R KEGG: mtt:Ftrac_2968 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2339613..2341058) Cyclobacterium marinum DSM 745 11035811 YP_004773986.1 CDS Cycma_2008 NC_015914.1 2341198 2341389 D KEGG: sli:Slin_5074 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2341198..2341389 Cyclobacterium marinum DSM 745 11035812 YP_004773987.1 CDS Cycma_2009 NC_015914.1 2341527 2341838 D SPTR: Protein PXR1 (PinX1-related protein 1); hypothetical protein 2341527..2341838 Cyclobacterium marinum DSM 745 11035813 YP_004773988.1 CDS Cycma_2010 NC_015914.1 2342067 2343257 R KEGG: bfr:BF0465 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2342067..2343257) Cyclobacterium marinum DSM 745 11035814 YP_004773989.1 CDS Cycma_2011 NC_015914.1 2343775 2345661 D PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: dfe:Dfer_4068 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Drug resistance ATPase-1; ABC transporter 2343775..2345661 Cyclobacterium marinum DSM 745 11035815 YP_004773990.1 CDS Cycma_2012 NC_015914.1 2345704 2346564 R PFAM: Phosphorylase superfamily; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: mtt:Ftrac_3591 purine or other phosphorylase 1; PFAM: Nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase II; purine or other phosphorylase 1 complement(2345704..2346564) Cyclobacterium marinum DSM 745 11035816 YP_004773991.1 CDS Cycma_2013 NC_015914.1 2346545 2347531 R PFAM: Rhodanese-like domain; COGs: COG1054 sulfurtransferase; HAMAP: UPF0176 protein yceA; InterPro IPR001763; KEGG: mtt:Ftrac_3590 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: UPF0176 protein ALPR1_03445; hypothetical protein complement(2346545..2347531) Cyclobacterium marinum DSM 745 11035817 YP_004773992.1 CDS Cycma_2014 NC_015914.1 2347585 2348223 R TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451:IPR020019; KEGG: sli:Slin_5687 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; SPTR: Acetyltransferase; TIGRFAM: Sialic acid O-acyltransferase, NeuD; sugar O-acyltransferase complement(2347585..2348223) Cyclobacterium marinum DSM 745 11035818 YP_004773993.1 CDS Cycma_2015 NC_015914.1 2348277 2349581 R PFAM: Protein of unknown function (DUF2851); KEGG: aas:Aasi_0589 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2348277..2349581) Cyclobacterium marinum DSM 745 11035819 YP_004773994.1 CDS Cycma_2016 NC_015914.1 2349654 2350472 R PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; COGs: COG0284 Orotidine-5'-phosphate decarboxylase; HAMAP: Orotidine 5'-phosphate decarboxylase; InterPro IPR001754:IPR011995; KEGG: mtt:Ftrac_2671 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 2, core; orotidine 5'-phosphate decarboxylase complement(2349654..2350472) Cyclobacterium marinum DSM 745 11035820 YP_004773995.1 CDS Cycma_2017 NC_015914.1 2350519 2351175 R PFAM: Outer membrane lipoprotein carrier protein LolA; COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: chu:CHU_2699 gliding motility-like protein; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: Outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(2350519..2351175) Cyclobacterium marinum DSM 745 11035821 YP_004773996.1 CDS Cycma_2018 NC_015914.1 2351194 2353716 R PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: mtt:Ftrac_2669 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: FtsK/SpoIIIE family protein; DNA translocase FtsK complement(2351194..2353716) Cyclobacterium marinum DSM 745 11035822 YP_004773997.1 CDS Cycma_2019 NC_015914.1 2353763 2354803 R PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; COGs: COG0167 Dihydroorotate dehydrogenase; HAMAP: Dihydroorotate dehydrogenase; InterPro IPR012135:IPR005719; KEGG: mtt:Ftrac_1484 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 2; dihydroorotate dehydrogenase complement(2353763..2354803) Cyclobacterium marinum DSM 745 11035823 YP_004773998.1 CDS Cycma_2020 NC_015914.1 2355119 2355751 R KEGG: protein tyrosine phosphatase; SPTR: Probable arsenate reductase; protein tyrosine phosphatase complement(2355119..2355751) Cyclobacterium marinum DSM 745 11035824 YP_004773999.1 CDS Cycma_2021 NC_015914.1 2355913 2356245 R PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family protein; regulatory protein ArsR complement(2355913..2356245) Cyclobacterium marinum DSM 745 11035825 YP_004774000.1 CDS Cycma_2022 NC_015914.1 2356521 2357843 R PFAM: Inner membrane protein CreD; COGs: COG4452 Inner membrane protein involved in colicin E2 resistance; InterPro IPR010364; KEGG: cpi:Cpin_0421 hypothetical protein; PFAM: Uncharacterised protein family, inner membrane CreD; SPTR: Inner membrane CreD family protein; Inner membrane CreD family protein complement(2356521..2357843) Cyclobacterium marinum DSM 745 11035826 YP_004774001.1 CDS Cycma_2023 NC_015914.1 2358360 2359913 D PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: lby:Lbys_2090 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28; peptidase M28 2358360..2359913 Cyclobacterium marinum DSM 745 11035827 YP_004774002.1 CDS Cycma_2024 NC_015914.1 2360210 2360986 D PFAM: Trehalose utilisation; SPTR: uncharacterized protein; hypothetical protein 2360210..2360986 Cyclobacterium marinum DSM 745 11035828 YP_004774003.1 CDS Cycma_2025 NC_015914.1 2361173 2361403 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2361173..2361403 Cyclobacterium marinum DSM 745 11035829 YP_004774004.1 CDS Cycma_2026 NC_015914.1 2361393 2361740 D PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; SPTR: Toxin-antitoxin system, toxin component, MazF family; transcriptional modulator of MazE/toxin MazF 2361393..2361740 Cyclobacterium marinum DSM 745 11035830 YP_004774005.1 CDS Cycma_2027 NC_015914.1 2361860 2362969 D KEGG: gym:GYMC10_1676 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2361860..2362969 Cyclobacterium marinum DSM 745 11035831 YP_004774006.1 CDS Cycma_2028 NC_015914.1 2362995 2363534 R PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: fjo:Fjoh_2187 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: uncharacterized protein; NADPH-dependent FMN reductase complement(2362995..2363534) Cyclobacterium marinum DSM 745 11035832 YP_004774007.1 CDS Cycma_2029 NC_015914.1 2363924 2364385 R PFAM: Transposase IS200 like; InterPro IPR002686; KEGG: cch:Cag_0809 transposase; PFAM: Transposase IS200-like; SPTR: Probable transposase; transposase IS200-family protein complement(2363924..2364385) Cyclobacterium marinum DSM 745 11035833 YP_004774008.1 CDS Cycma_2030 NC_015914.1 2364901 2366022 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR006311; KEGG: glucose-fructose oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Glucose--fructose oxidoreductase (GFOR); oxidoreductase domain-containing protein complement(2364901..2366022) Cyclobacterium marinum DSM 745 11035834 YP_004774009.1 CDS Cycma_2031 NC_015914.1 2366225 2366641 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: GCN5-like N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: uncharacterized protein; N-acetyltransferase GCN5 2366225..2366641 Cyclobacterium marinum DSM 745 11035835 YP_004774010.1 CDS Cycma_2032 NC_015914.1 2366741 2368207 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: psl:Psta_0624 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dyhydrogenase; oxidoreductase domain-containing protein complement(2366741..2368207) Cyclobacterium marinum DSM 745 11035836 YP_004774011.1 CDS Cycma_2033 NC_015914.1 2368564 2368800 R SPTR: uncharacterized protein; hypothetical protein complement(2368564..2368800) Cyclobacterium marinum DSM 745 11035837 YP_004774012.1 CDS Cycma_2034 NC_015914.1 2368937 2370235 R PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: Cl-channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; SPTR: uncharacterized protein; Cl- channel voltage-gated family protein complement(2368937..2370235) Cyclobacterium marinum DSM 745 11035838 YP_004774013.1 CDS Cycma_2035 NC_015914.1 2370664 2371557 D PFAM: NAD dependent epimerase/dehydratase; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509:IPR013549:IPR010099; KEGG: mtt:Ftrac_2259 hypothetical protein; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; hypothetical protein 2370664..2371557 Cyclobacterium marinum DSM 745 11035839 YP_004774014.1 CDS Cycma_2036 NC_015914.1 2371654 2374209 D PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: mtt:Ftrac_1893 peptidase M14 carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Secreted protein containing N-Zinc-dependent carboxypeptidase related domain protein; peptidase M14 carboxypeptidase A 2371654..2374209 Cyclobacterium marinum DSM 745 11035840 YP_004774015.1 CDS Cycma_2037 NC_015914.1 2374357 2374863 D KEGG: mtt:Ftrac_1414 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2374357..2374863 Cyclobacterium marinum DSM 745 11035841 YP_004774016.1 CDS Cycma_2038 NC_015914.1 2374878 2375183 R KEGG: cpi:Cpin_0889 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2374878..2375183) Cyclobacterium marinum DSM 745 11035842 YP_004774017.1 CDS Cycma_2039 NC_015914.1 2375320 2375982 D PFAM: Protein of unknown function (DUF422); COGs: COG2324 membrane protein; InterPro IPR007354; KEGG: mtt:Ftrac_1977 hypothetical protein; PFAM: Protein of unknown function DUF422; SPTR: uncharacterized protein; hypothetical protein 2375320..2375982 Cyclobacterium marinum DSM 745 11035843 YP_004774018.1 CDS Cycma_2040 NC_015914.1 2376035 2376481 D PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: psn:Pedsa_2221 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Beta-carotene hydroxylase; fatty acid hydroxylase 2376035..2376481 Cyclobacterium marinum DSM 745 11035844 YP_004774019.1 CDS Cycma_2041 NC_015914.1 2376478 2377368 D PFAM: MerR family regulatory protein; InterPro IPR000551; KEGG: sli:Slin_5173 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Probable transcriptional regulator, MerR family; regulatory protein MerR 2376478..2377368 Cyclobacterium marinum DSM 745 11035845 YP_004774020.1 CDS Cycma_2042 NC_015914.1 2378015 2379772 D PFAM: Glucose / Sorbosone dehydrogenase; Cytochrome c; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: fbc:FB2170_15068 L-sorbosone dehydrogenase; PFAM: Cytochrome c, class I; SPTR: L-sorbosone dehydrogenase; cytochrome c class I 2378015..2379772 Cyclobacterium marinum DSM 745 11035846 YP_004774021.1 CDS Cycma_2043 NC_015914.1 2379874 2380560 D PFAM: Domain of unknown function (DUF1083); KEGG: dat:HRM2_08770 GGDEF domain protein (selenocysteine protein); SPTR: GGDEF domain protein (Selenocysteine protein); diguanylate cyclase 2379874..2380560 Cyclobacterium marinum DSM 745 11035847 YP_004774022.1 CDS Cycma_2044 NC_015914.1 2380572 2381819 D PFAM: Amidohydrolase; COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_04535 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; amidohydrolase 2380572..2381819 Cyclobacterium marinum DSM 745 11035848 YP_004774023.1 CDS Cycma_2045 NC_015914.1 2381875 2382402 D PFAM: Endoribonuclease L-PSP; COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: dfe:Dfer_1554 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; endoribonuclease L-PSP 2381875..2382402 Cyclobacterium marinum DSM 745 11035849 YP_004774024.1 CDS Cycma_2046 NC_015914.1 2382456 2383679 D PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR006311; KEGG: dfe:Dfer_2440 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein; selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein 2382456..2383679 Cyclobacterium marinum DSM 745 11035850 YP_004774025.1 CDS Cycma_2047 NC_015914.1 2383683 2384924 D PFAM: Amidohydrolase; COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: sli:Slin_3965 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase; amidohydrolase 2383683..2384924 Cyclobacterium marinum DSM 745 11035851 YP_004774026.1 CDS Cycma_2048 NC_015914.1 2385020 2385181 R hypothetical protein complement(2385020..2385181) Cyclobacterium marinum DSM 745 11035852 YP_004774027.1 CDS Cycma_2049 NC_015914.1 2385323 2385643 R PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: mtt:Ftrac_1536 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; thioredoxin complement(2385323..2385643) Cyclobacterium marinum DSM 745 11035853 YP_004774028.1 CDS Cycma_2050 NC_015914.1 2385731 2390017 R PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; Exonuclease; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR013520:IPR004013:IPR011708:IPR004365:IPR 006055:IPR003141:IPR004805; KEGG: mtt:Ftrac_3357 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Exonuclease, RNase T/DNA polymerase III; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Polymerase/histidinol phosphatase, N-terminal; Exonuclease; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(2385731..2390017) Cyclobacterium marinum DSM 745 11035854 YP_004774029.1 CDS Cycma_2051 NC_015914.1 2390372 2392150 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_3216 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase complement(2390372..2392150) Cyclobacterium marinum DSM 745 11035855 YP_004774030.1 CDS Cycma_2052 NC_015914.1 2392318 2392560 D hypothetical protein 2392318..2392560 Cyclobacterium marinum DSM 745 11035856 YP_004774031.1 CDS Cycma_2053 NC_015914.1 2392665 2396054 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0615 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 2392665..2396054 Cyclobacterium marinum DSM 745 11035857 YP_004774032.1 CDS Cycma_2054 NC_015914.1 2396075 2397760 D KEGG: dfe:Dfer_0616 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2396075..2397760 Cyclobacterium marinum DSM 745 11035858 YP_004774033.1 CDS Cycma_2055 NC_015914.1 2398281 2398457 R hypothetical protein complement(2398281..2398457) Cyclobacterium marinum DSM 745 11035859 YP_004774034.1 CDS Cycma_2056 NC_015914.1 2398524 2399822 R KEGG: dfe:Dfer_3212 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2398524..2399822) Cyclobacterium marinum DSM 745 11035860 YP_004774035.1 CDS Cycma_2057 NC_015914.1 2399992 2401155 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR000005:IPR018060; KEGG: dfe:Dfer_4330 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; Periplasmic binding protein/LacI transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(2399992..2401155) Cyclobacterium marinum DSM 745 11035861 YP_004774036.1 CDS Cycma_2058 NC_015914.1 2401159 2402406 R PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: dfe:Dfer_4329 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein complement(2401159..2402406) Cyclobacterium marinum DSM 745 11035862 YP_004774037.1 CDS Cycma_2059 NC_015914.1 2402500 2403348 R PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: sli:Slin_6585 ROK family protein; PFAM: ROK; SPTR: ROK family protein; ROK family protein complement(2402500..2403348) Cyclobacterium marinum DSM 745 11035863 YP_004774038.1 CDS Cycma_2060 NC_015914.1 2403844 2405094 D PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: pcu:pc1536 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: uncharacterized protein; metallophosphoesterase 2403844..2405094 Cyclobacterium marinum DSM 745 11035864 YP_004774039.1 CDS Cycma_2061 NC_015914.1 2405091 2406197 D PFAM: BNR/Asp-box repeat; COGs: COG4692 neuraminidase (sialidase); KEGG: dfe:Dfer_2863 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2405091..2406197 Cyclobacterium marinum DSM 745 11035865 YP_004774040.1 CDS Cycma_2062 NC_015914.1 2406211 2407260 D PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: dfe:Dfer_4311 YdjC family protein; PFAM: YdjC-like protein; SPTR: YdjC family protein; hypothetical protein 2406211..2407260 Cyclobacterium marinum DSM 745 11035866 YP_004774041.1 CDS Cycma_2063 NC_015914.1 2407257 2408438 D PFAM: BNR/Asp-box repeat; COGs: COG4692 neuraminidase (sialidase); KEGG: neuraminidase (sialidase)-like protein; SPTR: Neuraminidase (Sialidase)-like protein; neuraminidase (sialidase)-like protein 2407257..2408438 Cyclobacterium marinum DSM 745 11035867 YP_004774042.1 CDS Cycma_2064 NC_015914.1 2408681 2410921 D KEGG: sli:Slin_6607 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2408681..2410921 Cyclobacterium marinum DSM 745 11035868 YP_004774043.1 CDS Cycma_2065 NC_015914.1 2410990 2411100 R hypothetical protein complement(2410990..2411100) Cyclobacterium marinum DSM 745 11035869 YP_004774044.1 CDS Cycma_2066 NC_015914.1 2411273 2413513 D KEGG: sli:Slin_6607 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2411273..2413513 Cyclobacterium marinum DSM 745 11035870 YP_004774045.1 CDS Cycma_2067 NC_015914.1 2413516 2414328 D PFAM: HpcH/HpaI aldolase/citrate lyase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: sli:Slin_6606 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: HpcH/HpaI aldolase; HpcH/HpaI aldolase 2413516..2414328 Cyclobacterium marinum DSM 745 11035871 YP_004774046.1 CDS Cycma_2068 NC_015914.1 2414364 2415173 D PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; COGs: COG2103 sugar phosphate isomerase; InterPro IPR001347; KEGG: phe:Phep_3400 sugar isomerase (SIS); PFAM: Sugar isomerase (SIS); SPTR: Sugar isomerase (SIS); sugar isomerase (SIS) 2414364..2415173 Cyclobacterium marinum DSM 745 11035872 YP_004774047.1 CDS Cycma_2069 NC_015914.1 2415259 2415504 R PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: sli:Slin_5126 H+transporting two-sector ATPase delta/subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; SPTR: ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein; ATPase F1 subunit delta/epsilon subunit complement(2415259..2415504) Cyclobacterium marinum DSM 745 11035873 YP_004774048.1 CDS Cycma_2070 NC_015914.1 2415558 2417060 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; COGs: COG0055 F0F1-type ATP synthase beta subunit; HAMAP: ATPase, F1 complex, beta subunit; InterProIPR004100:IPR000194:IPR000793:IPR003593:IPR 005722; KEGG: mtt:Ftrac_2649 ATP synthase f1 subcomplex beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase F1, beta subunit; TIGRFAM: ATPase, F1 complex, beta subunit; ATP synthase subunit beta complement(2415558..2417060) Cyclobacterium marinum DSM 745 11035874 YP_004774049.1 CDS Cycma_2071 NC_015914.1 2417235 2417717 R PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: mtt:Ftrac_2275 nlp/p60 protein; PFAM: NLP/P60; SPTR: Lipoprotein; NLP/P60 protein complement(2417235..2417717) Cyclobacterium marinum DSM 745 11035875 YP_004774050.1 CDS Cycma_2072 NC_015914.1 2418141 2418386 D SPTR: uncharacterized protein; hypothetical protein 2418141..2418386 Cyclobacterium marinum DSM 745 11035876 YP_004774051.1 CDS Cycma_2073 NC_015914.1 2418395 2419003 R PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: mtt:Ftrac_1919 dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(2418395..2419003) Cyclobacterium marinum DSM 745 11035877 YP_004774052.1 CDS Cycma_2074 NC_015914.1 2418996 2419961 R KEGG: mtt:Ftrac_1918 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2418996..2419961) Cyclobacterium marinum DSM 745 11035878 YP_004774053.1 CDS Cycma_2075 NC_015914.1 2419974 2420294 R PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: mtt:Ftrac_1917 protein translocase subunit YajC; PFAM: YajC; SPTR: Preprotein translocase, YajC subunit; TIGRFAM: YajC; preprotein translocase subunit YajC complement(2419974..2420294) Cyclobacterium marinum DSM 745 11035879 YP_004774054.1 CDS Cycma_2076 NC_015914.1 2420297 2420842 R PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Lipoprotein; hypothetical protein complement(2420297..2420842) Cyclobacterium marinum DSM 745 11035880 YP_004774055.1 CDS Cycma_2077 NC_015914.1 2420855 2421163 R KEGG: dfe:Dfer_4925 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2420855..2421163) Cyclobacterium marinum DSM 745 11035881 YP_004774056.1 CDS Cycma_2078 NC_015914.1 2421172 2422356 R PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; COGs: COG0781 Transcription termination factor; InterPro IPR006027:IPR011605; KEGG: mtt:Ftrac_1914 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: Antitermination factor; TIGRFAM: NusB antitermination factor; NusB antitermination factor complement(2421172..2422356) Cyclobacterium marinum DSM 745 11035882 YP_004774057.1 CDS Cycma_2079 NC_015914.1 2422504 2423604 R PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_1913 leucine dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Leucine dehydrogenase LeuDH; Glu/Leu/Phe/Val dehydrogenase complement(2422504..2423604) Cyclobacterium marinum DSM 745 11035883 YP_004774058.1 CDS Cycma_2080 NC_015914.1 2423749 2425542 D PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: sli:Slin_6331 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, permease/ATP-binding protein, MDR family; ABC transporter 2423749..2425542 Cyclobacterium marinum DSM 745 11035884 YP_004774059.1 CDS Cycma_2081 NC_015914.1 2425560 2426306 R KEGG: dfe:Dfer_3799 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2425560..2426306) Cyclobacterium marinum DSM 745 11035885 YP_004774060.1 CDS Cycma_2082 NC_015914.1 2426354 2428333 D KEGG: fbc:FB2170_01387 hypothetical protein; SPTR: Coagulation factor 5/8 type domain protein; hypothetical protein 2426354..2428333 Cyclobacterium marinum DSM 745 11035886 YP_004774061.1 CDS Cycma_2084 NC_015914.1 2429180 2430238 R PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; KEGG: phe:Phep_4286 class I and II aminotransferase; SPTR: uncharacterized protein; class I and II aminotransferase complement(2429180..2430238) Cyclobacterium marinum DSM 745 11035888 YP_004774062.1 CDS Cycma_2085 NC_015914.1 2430253 2431263 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: dfe:Dfer_3890 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Chloromuconate cycloisomerase YkfB1; mandelate racemase complement(2430253..2431263) Cyclobacterium marinum DSM 745 11035970 YP_004774063.1 CDS Cycma_2086 NC_015914.1 2431372 2432847 D PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: shg:Sph21_3888 peptidase M14 carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SPTR: uncharacterized protein; peptidase M14 carboxypeptidase A 2431372..2432847 Cyclobacterium marinum DSM 745 11035971 YP_004774064.1 CDS Cycma_2087 NC_015914.1 2433002 2433718 D PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: psn:Pedsa_2158 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; type 12 methyltransferase 2433002..2433718 Cyclobacterium marinum DSM 745 11035972 YP_004774065.1 CDS Cycma_2088 NC_015914.1 2433792 2435168 R PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; COGs: COG1066 ATP-dependent serine protease; InterPro IPR003593:IPR004504; KEGG: dfe:Dfer_4772 DNA repair protein RadA; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA complement(2433792..2435168) Cyclobacterium marinum DSM 745 11035973 YP_004774066.1 CDS Cycma_2089 NC_015914.1 2435235 2438051 R PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase A; TIGRFAM: DNA polymerase I; COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR020046:IPR020047:IPR002562:IPR001098:IPR 002421:IPR008918:IPR018320; KEGG: mtt:Ftrac_3236 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; DNA polymerase I complement(2435235..2438051) Cyclobacterium marinum DSM 745 11035974 YP_004774067.1 CDS Cycma_2090 NC_015914.1 2438376 2438690 D KEGG: phe:Phep_0416 hypothetical protein; SPTR: Seryl-tRNA synthetase; hypothetical protein 2438376..2438690 Cyclobacterium marinum DSM 745 11035975 YP_004774068.1 CDS Cycma_2091 NC_015914.1 2438791 2439237 R KEGG: mtt:Ftrac_0205 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2438791..2439237) Cyclobacterium marinum DSM 745 11035976 YP_004774069.1 CDS Cycma_2092 NC_015914.1 2439308 2439760 R hypothetical protein complement(2439308..2439760) Cyclobacterium marinum DSM 745 11035977 YP_004774070.1 CDS Cycma_2093 NC_015914.1 2439901 2440506 R SPTR: uncharacterized protein; hypothetical protein complement(2439901..2440506) Cyclobacterium marinum DSM 745 11035978 YP_004774071.1 CDS Cycma_2094 NC_015914.1 2440645 2442180 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058:IPR004527; KEGG: mtt:Ftrac_2517 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamate--tRNA ligase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; glutamyl-tRNA synthetase 2440645..2442180 Cyclobacterium marinum DSM 745 11035979 YP_004774072.1 CDS Cycma_2095 NC_015914.1 2442182 2442406 D KEGG: dfe:Dfer_4263 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2442182..2442406 Cyclobacterium marinum DSM 745 11035980 YP_004774073.1 CDS Cycma_2096 NC_015914.1 2442453 2443091 D KEGG: ppn:Palpr_0374 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2442453..2443091 Cyclobacterium marinum DSM 745 11035981 YP_004774074.1 CDS Cycma_2097 NC_015914.1 2443067 2443948 R KEGG: mtt:Ftrac_3266 tetratricopeptide tpr_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_1 repeat-containing protein; hypothetical protein complement(2443067..2443948) Cyclobacterium marinum DSM 745 11035982 YP_004774075.1 CDS Cycma_2098 NC_015914.1 2443899 2444726 R KEGG: mtt:Ftrac_3265 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2443899..2444726) Cyclobacterium marinum DSM 745 11035983 YP_004774076.1 CDS Cycma_2099 NC_015914.1 2444723 2445115 R PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: mtt:Ftrac_3264 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF37; hypothetical protein complement(2444723..2445115) Cyclobacterium marinum DSM 745 11035984 YP_004774077.1 CDS Cycma_2100 NC_015914.1 2445078 2445773 R KEGG: mtt:Ftrac_3263 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2445078..2445773) Cyclobacterium marinum DSM 745 11035985 YP_004774078.1 CDS Cycma_2101 NC_015914.1 2445773 2446219 R hypothetical protein complement(2445773..2446219) Cyclobacterium marinum DSM 745 11035986 YP_004774079.1 CDS Cycma_2102 NC_015914.1 2446970 2447557 D SPTR: uncharacterized protein; hypothetical protein 2446970..2447557 Cyclobacterium marinum DSM 745 11035987 YP_004774080.1 CDS Cycma_2103 NC_015914.1 2447554 2448486 R PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR013542:IPR001450; KEGG: mtt:Ftrac_3353 hypothetical protein; PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: iron-sulfur cluster-binding protein; hypothetical protein complement(2447554..2448486) Cyclobacterium marinum DSM 745 11035988 YP_004774081.1 CDS Cycma_2104 NC_015914.1 2448519 2449556 R PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR008824:IPR003959:IPR008823:IPR003593:IPR 004605; KEGG: mtt:Ftrac_3352 holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; Holliday junction DNA helicase subunit RuvB complement(2448519..2449556) Cyclobacterium marinum DSM 745 11035989 YP_004774082.1 CDS Cycma_2105 NC_015914.1 2449714 2450781 D PFAM: ApbE family; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: mtt:Ftrac_2966 ApbE family lipoprotein; PFAM: ApbE-like lipoprotein; SPTR: Thiamin biosynthesis lipoprotein ApbE; ApbE family lipoprotein 2449714..2450781 Cyclobacterium marinum DSM 745 11035990 YP_004774083.1 CDS Cycma_2106 NC_015914.1 2450795 2451529 D PFAM: ZIP Zinc transporter; InterPro IPR003689; KEGG: mtt:Ftrac_2964 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: Zinc/iron permease; zinc/iron permease 2450795..2451529 Cyclobacterium marinum DSM 745 11035991 YP_004774084.1 CDS Cycma_2107 NC_015914.1 2452164 2453675 R PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: sul:SYO3AOP1_0689 glycosyl transferase 39; PFAM: Glycosyl transferase, family 39; SPTR: Membrane protein; glycosyl transferase family protein complement(2452164..2453675) Cyclobacterium marinum DSM 745 11035992 YP_004774085.1 CDS Cycma_2108 NC_015914.1 2454081 2456504 R KEGG: dfe:Dfer_4325 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2454081..2456504) Cyclobacterium marinum DSM 745 11035993 YP_004774086.1 CDS Cycma_2109 NC_015914.1 2456565 2457173 R KEGG: cao:Celal_3215 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2456565..2457173) Cyclobacterium marinum DSM 745 11035994 YP_004774087.1 CDS Cycma_2111 NC_015914.1 2458007 2459002 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 2458007..2459002 Cyclobacterium marinum DSM 745 11035996 YP_004774088.1 CDS Cycma_2112 NC_015914.1 2459739 2460368 R PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: bth:BT_2621 hypothetical protein; PFAM: Lipase, GDSL; SPTR: Sialate O-acetylesterase; G-D-S-L family lipolytic protein complement(2459739..2460368) Cyclobacterium marinum DSM 745 11035997 YP_004774089.1 CDS Cycma_2113 NC_015914.1 2460470 2461315 D InterPro IPR000537; KEGG: lic:LIC12672 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: uncharacterized protein; UbiA prenyltransferase 2460470..2461315 Cyclobacterium marinum DSM 745 11035998 YP_004774090.1 CDS Cycma_2114 NC_015914.1 2461361 2462014 D PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: sli:Slin_1748 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12; type 12 methyltransferase 2461361..2462014 Cyclobacterium marinum DSM 745 11035999 YP_004774091.1 CDS Cycma_2115 NC_015914.1 2461963 2463291 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: sli:Slin_4518 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2461963..2463291) Cyclobacterium marinum DSM 745 11036000 YP_004774092.1 CDS Cycma_2116 NC_015914.1 2463315 2464484 R PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR010918; KEGG: mtt:Ftrac_2021 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; SPTR: phosphoribosylformylglycinamidine cyclo-ligase; AIR synthase-like protein domain-containing protein complement(2463315..2464484) Cyclobacterium marinum DSM 745 11036001 YP_004774093.1 CDS Cycma_2117 NC_015914.1 2464530 2466479 R PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR001440:IPR011659:IPR006665:IPR019734; KEGG: mtt:Ftrac_3322 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Tetratricopeptide TPR-1; WD40-like Beta Propeller; SMART: Tetratricopeptide repeat; SPTR: Outer membrane protein, peptidoglycan-associated lipoprotein; OmpA/MotB domain-containing protein complement(2464530..2466479) Cyclobacterium marinum DSM 745 11036002 YP_004774094.1 CDS Cycma_2118 NC_015914.1 2466501 2466989 R KEGG: mtt:Ftrac_3321 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2466501..2466989) Cyclobacterium marinum DSM 745 11036003 YP_004774095.1 CDS Cycma_2119 NC_015914.1 2467168 2467962 R PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: mtt:Ftrac_2753 hypothetical protein; PFAM: Cysteine-rich region, CCG; SPTR: Iron-sulfur cluster-binding protein; hypothetical protein complement(2467168..2467962) Cyclobacterium marinum DSM 745 11036004 YP_004774096.1 CDS Cycma_2120 NC_015914.1 2467975 2469306 R COGs: COG0247 Fe-S oxidoreductase; KEGG: mtt:Ftrac_2754 oxidoreductase, fe-s subunit; SPTR: uncharacterized protein; oxidoreductase, fe-s subunit complement(2467975..2469306) Cyclobacterium marinum DSM 745 11036005 YP_004774097.1 CDS Cycma_2121 NC_015914.1 2469791 2470276 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-H factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2469791..2470276 Cyclobacterium marinum DSM 745 11036007 YP_004774098.1 CDS Cycma_2122 NC_015914.1 2470266 2470688 D SPTR: uncharacterized protein; hypothetical protein 2470266..2470688 Cyclobacterium marinum DSM 745 11036008 YP_004774099.1 CDS Cycma_2123 NC_015914.1 2470691 2471221 D KEGG: cpi:Cpin_5460 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2470691..2471221 Cyclobacterium marinum DSM 745 11036009 YP_004774100.1 CDS Cycma_2124 NC_015914.1 2471247 2471735 D SPTR: uncharacterized protein; hypothetical protein 2471247..2471735 Cyclobacterium marinum DSM 745 11036010 YP_004774101.1 CDS Cycma_2125 NC_015914.1 2471915 2472529 D PFAM: Copper/zinc superoxide dismutase (SODC); COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424; KEGG: zpr:ZPR_2436 Cu/Zn superoxide dismutase; PFAM: Superoxide dismutase, copper/zinc binding; SPTR: Superoxide dismutase [Cu-Zn]; superoxide dismutase copper/zinc binding protein 2471915..2472529 Cyclobacterium marinum DSM 745 11036011 YP_004774102.1 CDS Cycma_2126 NC_015914.1 2472781 2473146 D KEGG: fjo:Fjoh_4706 glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: uncharacterized protein; glyoxalase/bleomycin resistance protein/dioxygenase 2472781..2473146 Cyclobacterium marinum DSM 745 11036012 YP_004774103.1 CDS Cycma_2127 NC_015914.1 2473303 2475510 D PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: cat:CA2559_00245 site-specific DNA-methyltransferase; PFAM: DNA methylase, C-5 cytosine-specific; SPTR: Cytosine-specific methyltransferase; TIGRFAM: DNA methylase, C-5 cytosine-specific; DNA-cytosine methyltransferase 2473303..2475510 Cyclobacterium marinum DSM 745 11036013 YP_004774104.1 CDS Cycma_2128 NC_015914.1 2475514 2476638 D KEGG: cyc:PCC7424_4761 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2475514..2476638 Cyclobacterium marinum DSM 745 11036014 YP_004774105.1 CDS Cycma_2129 NC_015914.1 2476639 2477706 D SPTR: uncharacterized protein; hypothetical protein 2476639..2477706 Cyclobacterium marinum DSM 745 11036015 YP_004774106.1 CDS Cycma_2130 NC_015914.1 2477703 2478881 D KEGG: cat:CA2559_00250 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2477703..2478881 Cyclobacterium marinum DSM 745 11036016 YP_004774107.1 CDS Cycma_2131 NC_015914.1 2479165 2479287 D hypothetical protein 2479165..2479287 Cyclobacterium marinum DSM 745 11036017 YP_004774108.1 CDS Cycma_2132 NC_015914.1 2479426 2480085 D KEGG: ran:Riean_1882 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2479426..2480085 Cyclobacterium marinum DSM 745 11036018 YP_004774109.1 CDS Cycma_2133 NC_015914.1 2480279 2480956 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: shg:Sph21_2558 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator; winged helix family two component transcriptional regulator 2480279..2480956 Cyclobacterium marinum DSM 745 11036019 YP_004774110.1 CDS Cycma_2134 NC_015914.1 2480953 2482239 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: shg:Sph21_2559 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Two-component sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2480953..2482239 Cyclobacterium marinum DSM 745 11036020 YP_004774111.1 CDS Cycma_2135 NC_015914.1 2482315 2482758 D PFAM: Protein of unknown function (DUF2874); KEGG: shg:Sph21_2560 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2482315..2482758 Cyclobacterium marinum DSM 745 11036021 YP_004774112.1 CDS Cycma_2136 NC_015914.1 2482758 2483933 D PFAM: Phosphate-selective porin O and P; InterPro IPR010870; KEGG: mtt:Ftrac_3113 phosphate-selective porin o and P; PFAM: Phosphate-selective porin O/P; SPTR: Phosphate-selective porin O and P; phosphate-selective porin O and P 2482758..2483933 Cyclobacterium marinum DSM 745 11036022 YP_004774113.1 CDS Cycma_2137 NC_015914.1 2484012 2484494 D KEGG: mpd:MCP_0932 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2484012..2484494 Cyclobacterium marinum DSM 745 11036023 YP_004774114.1 CDS Cycma_2138 NC_015914.1 2484856 2485851 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase; transposase IS116/IS110/IS902 family protein complement(2484856..2485851) Cyclobacterium marinum DSM 745 11036024 YP_004774115.1 CDS Cycma_2139 NC_015914.1 2486473 2487102 D PFAM: YceI-like domain; InterPro IPR007372; KEGG: cly:Celly_2528 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI family protein; hypothetical protein 2486473..2487102 Cyclobacterium marinum DSM 745 11036025 YP_004774116.1 CDS Cycma_2140 NC_015914.1 2487464 2488711 R hypothetical protein complement(2487464..2488711) Cyclobacterium marinum DSM 745 11036026 YP_004774117.1 CDS Cycma_2141 NC_015914.1 2488810 2490717 R PFAM: Beta-galactosidase; KEGG: msv:Mesil_2394 beta-galactosidase; SPTR: uncharacterized protein; hypothetical protein complement(2488810..2490717) Cyclobacterium marinum DSM 745 11036027 YP_004774118.1 CDS Cycma_2142 NC_015914.1 2491072 2491410 D PFAM: TfoX N-terminal domain; KEGG: coc:Coch_0534 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2491072..2491410 Cyclobacterium marinum DSM 745 11036028 YP_004774119.1 CDS Cycma_2143 NC_015914.1 2491661 2492788 D KEGG: sli:Slin_4939 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2491661..2492788 Cyclobacterium marinum DSM 745 11036029 YP_004774120.1 CDS Cycma_2144 NC_015914.1 2493110 2494891 D PFAM: Bacterial alpha-L-rhamnosidase; InterPro IPR008902; KEGG: phe:Phep_0959 alpha-L-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; SPTR: Alpha-L-rhamnosidase; alpha-L-rhamnosidase 2493110..2494891 Cyclobacterium marinum DSM 745 11036030 YP_004774121.1 CDS Cycma_2145 NC_015914.1 2495159 2497555 R PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; InterPro IPR005144:IPR013509:IPR000788:IPR013346; KEGG: mtt:Ftrac_1814 ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase subunit alpha complement(2495159..2497555) Cyclobacterium marinum DSM 745 11036031 YP_004774122.1 CDS Cycma_2146 NC_015914.1 2497586 2498566 R PFAM: Ribonucleotide reductase, small chain; COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358; KEGG: aas:Aasi_0535 hypothetical protein; PFAM: Ribonucleotide reductase; SPTR: Ribonucleoside-diphosphate reductase, beta subunit; ribonucleotide reductase complement(2497586..2498566) Cyclobacterium marinum DSM 745 11036032 YP_004774123.1 CDS Cycma_2147 NC_015914.1 2498681 2498782 D hypothetical protein 2498681..2498782 Cyclobacterium marinum DSM 745 11036033 YP_004774124.1 CDS Cycma_2148 NC_015914.1 2499121 2499471 D PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787; KEGG: mtt:Ftrac_1817 LSU ribosomal protein l21p; PFAM: Ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; 50S ribosomal protein L21 2499121..2499471 Cyclobacterium marinum DSM 745 11036034 YP_004774125.1 CDS Cycma_2149 NC_015914.1 2499505 2499765 D PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: wvi:Weevi_1116 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; 50S ribosomal protein L27 2499505..2499765 Cyclobacterium marinum DSM 745 11036035 YP_004774126.1 CDS Cycma_2150 NC_015914.1 2499892 2500200 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; InterPro IPR003489; KEGG: sli:Slin_1845 hypothetical protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: uncharacterized protein; sigma 54 modulation protein/ribosomal protein S30EA 2499892..2500200 Cyclobacterium marinum DSM 745 11036036 YP_004774127.1 CDS Cycma_2151 NC_015914.1 2500258 2500887 R PFAM: Rhomboid family; InterPro IPR002610; KEGG: mtt:Ftrac_1504 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Cytoplasmic membrane protein; rhomboid family protein complement(2500258..2500887) Cyclobacterium marinum DSM 745 11036037 YP_004774128.1 CDS Cycma_2152 NC_015914.1 2500892 2501878 R PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mtt:Ftrac_1505 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; polyprenyl synthetase complement(2500892..2501878) Cyclobacterium marinum DSM 745 11036038 YP_004774129.1 CDS Cycma_2153 NC_015914.1 2501868 2504045 R PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; COGs: COG0557 Exoribonuclease R; InterProIPR011129:IPR013223:IPR001900:IPR003029:IPR 011805:IPR004476; KEGG: mtt:Ftrac_1053 RNAse R; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; SPTR: Ribonuclease R; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; ribonuclease R complement(2501868..2504045) Cyclobacterium marinum DSM 745 11036039 YP_004774130.1 CDS Cycma_2154 NC_015914.1 2504127 2504861 R PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; InterPro IPR019288; KEGG: dfe:Dfer_3714 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: uncharacterized protein; 3'-5' exonuclease complement(2504127..2504861) Cyclobacterium marinum DSM 745 11036040 YP_004774131.1 CDS Cycma_2155 NC_015914.1 2504867 2505268 R KEGG: mtt:Ftrac_0792 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2504867..2505268) Cyclobacterium marinum DSM 745 11036041 YP_004774132.1 CDS Cycma_2156 NC_015914.1 2505265 2506038 R PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: lipoate-protein ligase B; COGs: COG0321 Lipoate-protein ligase B; HAMAP: Octanoyltransferase; InterPro IPR000544:IPR004143; KEGG: dfe:Dfer_3712 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Octanoyltransferase; TIGRFAM: Octanoyltransferase; Octanoyltransferase complement(2505265..2506038) Cyclobacterium marinum DSM 745 11036042 YP_004774133.1 CDS Cycma_2157 NC_015914.1 2506042 2506398 D PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: sli:Slin_5877 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein ALPR1_19103; TIGRFAM: Uncharacterised protein family UPF0102; hypothetical protein 2506042..2506398 Cyclobacterium marinum DSM 745 11036043 YP_004774134.1 CDS Cycma_2158 NC_015914.1 2506392 2507246 R KEGG: mtt:Ftrac_3451 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2506392..2507246) Cyclobacterium marinum DSM 745 11036044 YP_004774135.1 CDS Cycma_2159 NC_015914.1 2507491 2508693 D PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: mtt:Ftrac_1765 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aspartate transaminase; class I and II aminotransferase 2507491..2508693 Cyclobacterium marinum DSM 745 11036045 YP_004774136.1 CDS Cycma_2160 NC_015914.1 2508745 2509455 D PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: bfr:BF0223 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR: uncharacterized protein; family 2 glycosyl transferase 2508745..2509455 Cyclobacterium marinum DSM 745 11036046 YP_004774137.1 CDS Cycma_2161 NC_015914.1 2510194 2511210 D KEGG: cpi:Cpin_2014 outer membrane insertion C-terminal signal; SPTR: uncharacterized protein; outer membrane insertion C-terminal signal 2510194..2511210 Cyclobacterium marinum DSM 745 11036047 YP_004774138.1 CDS Cycma_2162 NC_015914.1 2511707 2515138 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_3376 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 2511707..2515138 Cyclobacterium marinum DSM 745 11036048 YP_004774139.1 CDS Cycma_2163 NC_015914.1 2515171 2516829 D KEGG: dfe:Dfer_3219 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2515171..2516829 Cyclobacterium marinum DSM 745 11036049 YP_004774140.1 CDS Cycma_2164 NC_015914.1 2516823 2518022 D KEGG: mtt:Ftrac_2134 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2516823..2518022 Cyclobacterium marinum DSM 745 11036050 YP_004774141.1 CDS Cycma_2165 NC_015914.1 2518077 2520398 R PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; COGs: COG0620 Methionine synthase II (cobalamin-independent); HAMAP:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; InterPro IPR006276:IPR013215:IPR002629; KEGG: fjo:Fjoh_1519 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase; TIGRFAM:5-methyltetrahydropteroyltriglutamate--homo cysteineS-methyltransferase; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(2518077..2520398) Cyclobacterium marinum DSM 745 11036132 YP_004774142.1 CDS Cycma_2166 NC_015914.1 2520869 2521933 R InterPro IPR001258; KEGG: dfe:Dfer_4570 NHL repeat containing protein; PFAM: NHL repeat; SPTR: NHL repeat containing protein; NHL repeat containing protein complement(2520869..2521933) Cyclobacterium marinum DSM 745 11036133 YP_004774143.1 CDS Cycma_2167 NC_015914.1 2521943 2523412 R PFAM: Protein of unknown function (DUF1501); InterPro IPR010869:IPR006311; KEGG: dfe:Dfer_2202 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; hypothetical protein complement(2521943..2523412) Cyclobacterium marinum DSM 745 11036134 YP_004774144.1 CDS Cycma_2168 NC_015914.1 2523412 2526672 R PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_2203 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: uncharacterized protein; hypothetical protein complement(2523412..2526672) Cyclobacterium marinum DSM 745 11036135 YP_004774145.1 CDS Cycma_2169 NC_015914.1 2527051 2527530 D hypothetical protein 2527051..2527530 Cyclobacterium marinum DSM 745 11036136 YP_004774146.1 CDS Cycma_2170 NC_015914.1 2527511 2528077 R PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR011462; KEGG: zpr:ZPR_4196 hypothetical protein; SPTR: Predicted transposase; hypothetical protein complement(2527511..2528077) Cyclobacterium marinum DSM 745 11036137 YP_004774147.1 CDS Cycma_2171 NC_015914.1 2528176 2529330 R KEGG: mtt:Ftrac_0440 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2528176..2529330) Cyclobacterium marinum DSM 745 11036138 YP_004774148.1 CDS Cycma_2172 NC_015914.1 2529450 2530607 R KEGG: mtt:Ftrac_0440 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2529450..2530607) Cyclobacterium marinum DSM 745 11036139 YP_004774149.1 CDS Cycma_2173 NC_015914.1 2530711 2531862 R KEGG: mtt:Ftrac_0440 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2530711..2531862) Cyclobacterium marinum DSM 745 11036140 YP_004774150.1 CDS Cycma_2174 NC_015914.1 2531967 2533106 R KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2531967..2533106) Cyclobacterium marinum DSM 745 11036141 YP_004774151.1 CDS Cycma_2175 NC_015914.1 2533168 2533380 R PFAM: Helix-turn-helix; COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: fba:FIC_01723 DNA-binding protein; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; XRE family transcriptional regulator complement(2533168..2533380) Cyclobacterium marinum DSM 745 11036142 YP_004774152.1 CDS Cycma_2176 NC_015914.1 2533384 2533968 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2533384..2533968) Cyclobacterium marinum DSM 745 11036143 YP_004774153.1 CDS Cycma_2177 NC_015914.1 2534188 2535282 D PFAM: Ligand-gated ion channel; Bacterial extracellular solute-binding proteins, family 3; InterPro IPR001320:IPR001638:IPR013099; KEGG: pha:PSHAa0590 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; Ion transport 2; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Ionotropic glutamate receptor; ABC transporter substrate-binding protein 2534188..2535282 Cyclobacterium marinum DSM 745 11036144 YP_004774154.1 CDS Cycma_2178 NC_015914.1 2535340 2535861 R PFAM: SpoU rRNA Methylase; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: mtt:Ftrac_2298 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(2535340..2535861) Cyclobacterium marinum DSM 745 11036145 YP_004774155.1 CDS Cycma_2179 NC_015914.1 2536063 2538663 D PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR007696:IPR000432:IPR005748:IPR007695:IPR 007860:IPR007861; KEGG: mtt:Ftrac_2299 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS, type 1; DNA mismatch repair protein mutS 2536063..2538663 Cyclobacterium marinum DSM 745 11036146 YP_004774156.1 CDS Cycma_2180 NC_015914.1 2539131 2541287 R PFAM: Two component regulator propeller; COGs: COG3292 periplasmic ligand-binding sensor domain; InterPro IPR011110; KEGG: sli:Slin_6607 hypothetical protein; SPTR: uncharacterized protein; two component regulator propeller domain-containing protein complement(2539131..2541287) Cyclobacterium marinum DSM 745 11036149 YP_004774157.1 CDS Cycma_2181 NC_015914.1 2541604 2542884 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: cao:Celal_3888 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2541604..2542884 Cyclobacterium marinum DSM 745 11036150 YP_004774158.1 CDS Cycma_2182 NC_015914.1 2542998 2543381 R hypothetical protein complement(2542998..2543381) Cyclobacterium marinum DSM 745 11036151 YP_004774159.1 CDS Cycma_2183 NC_015914.1 2543937 2544182 R PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1700 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC subunit C; manually curated; excinuclease ABC subunit C complement(2543937..2544182) Cyclobacterium marinum DSM 745 11036152 YP_004774160.1 CDS Cycma_2184 NC_015914.1 2545175 2545459 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG catalytic domain protein; excinuclease ABC subunit C 2545175..2545459 Cyclobacterium marinum DSM 745 11036155 YP_004774161.1 CDS Cycma_2185 NC_015914.1 2545479 2545850 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG catalytic domain protein; excinuclease ABC subunit C 2545479..2545850 Cyclobacterium marinum DSM 745 11036156 YP_004774162.1 CDS Cycma_2186 NC_015914.1 2545958 2546242 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG catalytic domain protein; excinuclease ABC subunit C 2545958..2546242 Cyclobacterium marinum DSM 745 11036157 YP_004774163.1 CDS Cycma_2187 NC_015914.1 2546350 2546634 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG catalytic domain protein; excinuclease ABC subunit C 2546350..2546634 Cyclobacterium marinum DSM 745 11036158 YP_004774164.1 CDS Cycma_2188 NC_015914.1 2546895 2549156 R PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: fbc:FB2170_02140 hypothetical protein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: uncharacterized protein; coagulation factor 5/8 type domain-containing protein complement(2546895..2549156) Cyclobacterium marinum DSM 745 11036159 YP_004774165.1 CDS Cycma_2189 NC_015914.1 2549489 2551066 D PFAM: Calcineurin-like phosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: fbc:FB2170_06300 phosphohydrolase; PFAM: Metallophosphoesterase; SPTR: Predicted phosphohydrolase; metallophosphoesterase 2549489..2551066 Cyclobacterium marinum DSM 745 11036160 YP_004774166.1 CDS Cycma_2190 NC_015914.1 2551137 2551994 R PFAM: LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR005119; KEGG: LysR family transcriptional regulator; PFAM: LysR, substrate-binding; SPTR: Bacterial regulatory protein, LysR family; LysR family transcriptional regulator complement(2551137..2551994) Cyclobacterium marinum DSM 745 11036161 YP_004774167.1 CDS Cycma_2191 NC_015914.1 2552180 2552290 R hypothetical protein complement(2552180..2552290) Cyclobacterium marinum DSM 745 11036162 YP_004774168.1 CDS Cycma_2192 NC_015914.1 2552328 2553479 R PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: swp:swp_4142 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: uncharacterized protein; Di-heme cytochrome c peroxidase complement(2552328..2553479) Cyclobacterium marinum DSM 745 11036163 YP_004774169.1 CDS Cycma_2193 NC_015914.1 2553529 2554182 R PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: cly:Celly_2854 electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: uncharacterized protein; electron transport protein SCO1/SenC complement(2553529..2554182) Cyclobacterium marinum DSM 745 11036164 YP_004774170.1 CDS Cycma_2194 NC_015914.1 2554172 2554750 R PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; KEGG: cly:Celly_2853 MORN variant repeat-containing protein; SPTR: Hypothetical exported 24-amino acid repeat protein; hypothetical protein complement(2554172..2554750) Cyclobacterium marinum DSM 745 11036165 YP_004774171.1 CDS Cycma_2195 NC_015914.1 2554750 2555520 R KEGG: sli:Slin_5144 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2554750..2555520) Cyclobacterium marinum DSM 745 11036166 YP_004774172.1 CDS Cycma_2196 NC_015914.1 2555544 2556194 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2555544..2556194) Cyclobacterium marinum DSM 745 11036167 YP_004774173.1 CDS Cycma_2197 NC_015914.1 2556207 2557172 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2556207..2557172) Cyclobacterium marinum DSM 745 11036168 YP_004774174.1 CDS Cycma_2198 NC_015914.1 2557485 2557931 R KEGG: fjo:Fjoh_3289 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2557485..2557931) Cyclobacterium marinum DSM 745 11036169 YP_004774175.1 CDS Cycma_2199 NC_015914.1 2558199 2558969 D KEGG: cly:Celly_3043 protein containing PKD domain-containing protein; SPTR: uncharacterized protein; protein containing PKD domain-containing protein 2558199..2558969 Cyclobacterium marinum DSM 745 11036170 YP_004774176.1 CDS Cycma_2200 NC_015914.1 2558985 2559098 D hypothetical protein 2558985..2559098 Cyclobacterium marinum DSM 745 11036171 YP_004774177.1 CDS Cycma_2201 NC_015914.1 2559070 2559768 R PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: gfo:GFO_3452 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR: uncharacterized protein; hypothetical protein complement(2559070..2559768) Cyclobacterium marinum DSM 745 11036172 YP_004774178.1 CDS Cycma_2202 NC_015914.1 2560052 2560750 R PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: fbc:FB2170_01592 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR: uncharacterized protein; hypothetical protein complement(2560052..2560750) Cyclobacterium marinum DSM 745 11036173 YP_004774179.1 CDS Cycma_2203 NC_015914.1 2560934 2561287 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: sco:SCO2888 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2560934..2561287) Cyclobacterium marinum DSM 745 11036174 YP_004774180.1 CDS Cycma_2204 NC_015914.1 2562235 2562366 R hypothetical protein complement(2562235..2562366) Cyclobacterium marinum DSM 745 11036175 YP_004774181.1 CDS Cycma_2205 NC_015914.1 2563798 2564802 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnA; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: zpr:ZPR_2189 pyridoxal-phosphate dependent enzyme; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Cysteine synthase; pyridoxal-5'-phosphate-dependent protein beta subunit 2563798..2564802 Cyclobacterium marinum DSM 745 11036176 YP_004774182.1 CDS Cycma_2206 NC_015914.1 2564796 2566616 D COGs: COG4529 conserved hypothetical protein; KEGG: zpr:ZPR_2189 pyridoxal-phosphate dependent enzyme; SPTR: Cysteine synthase; pyridoxal-phosphate dependent protein 2564796..2566616 Cyclobacterium marinum DSM 745 11036177 YP_004774183.1 CDS Cycma_2207 NC_015914.1 2566606 2568057 D PFAM: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: zpr:ZPR_2190 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Probable diaminopimelate decarboxylase; Orn/DAP/Arg decarboxylase 2 2566606..2568057 Cyclobacterium marinum DSM 745 11036178 YP_004774184.1 CDS Cycma_2209 NC_015914.1 2569301 2570575 D KEGG: psn:Pedsa_1674 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2569301..2570575 Cyclobacterium marinum DSM 745 11036180 YP_004774185.1 CDS Cycma_2210 NC_015914.1 2570553 2572118 D KEGG: psn:Pedsa_1673 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2570553..2572118 Cyclobacterium marinum DSM 745 11036181 YP_004774186.1 CDS Cycma_2213 NC_015914.1 2574817 2575350 D KEGG: sbn:Sbal195_4549 hypothetical protein; SPTR: ORF182; hypothetical protein 2574817..2575350 Cyclobacterium marinum DSM 745 11036184 YP_004774187.1 CDS Cycma_2214 NC_015914.1 2575826 2576239 D hypothetical protein 2575826..2576239 Cyclobacterium marinum DSM 745 11036185 YP_004774188.1 CDS Cycma_2215 NC_015914.1 2576514 2576720 D hypothetical protein 2576514..2576720 Cyclobacterium marinum DSM 745 11036186 YP_004774189.1 CDS Cycma_2216 NC_015914.1 2577670 2578200 D PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: scl:sce1370 dihydrofolate reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Riboflavin biosynthesis protein RibD; bifunctional deaminase-reductase domain-containing protein 2577670..2578200 Cyclobacterium marinum DSM 745 11036187 YP_004774190.1 CDS Cycma_2217 NC_015914.1 2578304 2578804 D PFAM: Staphylococcal nuclease homologue; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021; KEGG: fba:FIC_01092 prophage LambdaCh01, nuclease domain protein; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); SPTR: Prophage LambdaCh01, nuclease domain protein; nuclease 2578304..2578804 Cyclobacterium marinum DSM 745 11036188 YP_004774191.1 CDS Cycma_2218 NC_015914.1 2579288 2580286 D TIGRFAM: RHS repeat-associated core domain; KEGG: lby:Lbys_3290 cell wall-associated protein precursor; SPTR: cell wall-associated protein; TIGRFAM: RHS repeat-associated core domain-containing protein; RHS repeat-associated core domain-containing protein 2579288..2580286 Cyclobacterium marinum DSM 745 11036189 YP_004774192.1 CDS Cycma_2219 NC_015914.1 2580283 2580921 D hypothetical protein 2580283..2580921 Cyclobacterium marinum DSM 745 11036190 YP_004774193.1 CDS Cycma_2220 NC_015914.1 2581724 2582578 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060; KEGG: fbc:FB2170_00290 transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator; AraC family transcriptional regulator 2581724..2582578 Cyclobacterium marinum DSM 745 11036191 YP_004774194.1 CDS Cycma_2221 NC_015914.1 2582671 2583072 D KEGG: fbc:FB2170_00295 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2582671..2583072 Cyclobacterium marinum DSM 745 11036192 YP_004774195.1 CDS Cycma_2222 NC_015914.1 2583078 2583581 D PFAM: Domain of unknown function (DUF1772); COGs: COG5500 integral membrane protein; InterPro IPR018726; KEGG: fbc:FB2170_00300 integral-membrane protein; PFAM: Protein of unknown function DUF2266, transmembrane; SPTR: Probable integral-membrane protein; hypothetical protein 2583078..2583581 Cyclobacterium marinum DSM 745 11036193 YP_004774196.1 CDS Cycma_2223 NC_015914.1 2583600 2584442 D PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: fbc:FB2170_00305 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2583600..2584442 Cyclobacterium marinum DSM 745 11036194 YP_004774197.1 CDS Cycma_2224 NC_015914.1 2584635 2584757 D hypothetical protein 2584635..2584757 Cyclobacterium marinum DSM 745 11036195 YP_004774198.1 CDS Cycma_2225 NC_015914.1 2585027 2586478 D PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: cly:Celly_2622 membrane bound O-acyl transferase MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Alginate O-acetylation protein; membrane bound O-acyl transferase MBOAT family protein 2585027..2586478 Cyclobacterium marinum DSM 745 11036196 YP_004774199.1 CDS Cycma_2226 NC_015914.1 2586485 2587414 D KEGG: wvi:Weevi_0565 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2586485..2587414 Cyclobacterium marinum DSM 745 11036197 YP_004774200.1 CDS Cycma_2227 NC_015914.1 2587481 2588164 D PFAM: DNA alkylation repair enzyme; COGs: COG4912 DNA alkylation repair protein; InterPro IPR014825; KEGG: fbc:FB2170_07649 hypothetical protein; PFAM: DNA alkylation repair enzyme; SPTR: uncharacterized protein; DNA alkylation repair protein 2587481..2588164 Cyclobacterium marinum DSM 745 11036198 YP_004774201.1 CDS Cycma_2228 NC_015914.1 2588350 2589264 D PFAM: Endonuclease/Exonuclease/phosphatase; InterPro IPR005135; KEGG: bvu:BVU_0401 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: uncharacterized protein; hypothetical protein 2588350..2589264 Cyclobacterium marinum DSM 745 11036199 YP_004774202.1 CDS Cycma_2229 NC_015914.1 2589261 2590118 R PFAM: Formate/nitrite transporter; COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: zpr:ZPR_2292 formate/nitrite transporter; PFAM: Formate/nitrite transporter; SPTR: Formate/nitrite transporter family (FNT); formate/nitrite transporter complement(2589261..2590118) Cyclobacterium marinum DSM 745 11036200 YP_004774203.1 CDS Cycma_2230 NC_015914.1 2590211 2590912 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cpi:Cpin_5598 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; LytTR family two component transcriptional regulator complement(2590211..2590912) Cyclobacterium marinum DSM 745 11036201 YP_004774204.1 CDS Cycma_2231 NC_015914.1 2591235 2591822 R PFAM: Protein of unknown function (DUF3244); KEGG: fbc:FB2170_16051 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2591235..2591822) Cyclobacterium marinum DSM 745 11036202 YP_004774205.1 CDS Cycma_2232 NC_015914.1 2592183 2594270 R KEGG: tva:TVAG_377900 F5/8 type C domain containing protein; SPTR: Alpha-N-acetylgalactosaminidase; hypothetical protein complement(2592183..2594270) Cyclobacterium marinum DSM 745 11036203 YP_004774206.1 CDS Cycma_2233 NC_015914.1 2594302 2597145 R KEGG: psl:Psta_3483 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2594302..2597145) Cyclobacterium marinum DSM 745 11036204 YP_004774207.1 CDS Cycma_2234 NC_015914.1 2597167 2597448 R hypothetical protein complement(2597167..2597448) Cyclobacterium marinum DSM 745 11036205 YP_004774208.1 CDS Cycma_2235 NC_015914.1 2597655 2599292 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR013027; KEGG: pbs:Plabr_1496 xanthan lyase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: xanthan lyase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2597655..2599292 Cyclobacterium marinum DSM 745 11036206 YP_004774209.1 CDS Cycma_2236 NC_015914.1 2599500 2601506 R InterPro IPR013517; KEGG: pbs:Plabr_4234 FG-GAP repeat protein; PFAM: FG-GAP; SPTR: uncharacterized protein; hypothetical protein complement(2599500..2601506) Cyclobacterium marinum DSM 745 11036207 YP_004774210.1 CDS Cycma_2237 NC_015914.1 2601969 2602841 D PFAM: Periplasmic binding protein; COGs: COG4558 ABC-type hemin transport system periplasmic component; InterPro IPR002491; KEGG: cpi:Cpin_7224 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; ABC transporter substrate-binding protein 2601969..2602841 Cyclobacterium marinum DSM 745 11036208 YP_004774211.1 CDS Cycma_2238 NC_015914.1 2602838 2603893 D PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: alv:Alvin_1690 transport system permease; PFAM: Bacterial transport system permease; SPTR: Transport system permease; ABC transporter permease 2602838..2603893 Cyclobacterium marinum DSM 745 11036209 YP_004774212.1 CDS Cycma_2239 NC_015914.1 2603900 2604703 D PFAM: ABC transporter; COGs: COG4559 ABC-type hemin transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: alv:Alvin_1691 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 2603900..2604703 Cyclobacterium marinum DSM 745 11036210 YP_004774213.1 CDS Cycma_2240 NC_015914.1 2604754 2605803 D PFAM: Haemin-degrading HenS.ChuX domain; COGs: COG3720 heme degradation protein; InterPro IPR007845; KEGG: cpi:Cpin_7221 haemin-degrading protein; PFAM: Haemin-degrading; SPTR: Hemin transport protein HmuS; hemin-degrading family protein 2604754..2605803 Cyclobacterium marinum DSM 745 11036211 YP_004774214.1 CDS Cycma_2241 NC_015914.1 2605850 2608147 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6535 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Colicin I receptor; TonB-dependent receptor 2605850..2608147 Cyclobacterium marinum DSM 745 11036212 YP_004774215.1 CDS Cycma_2242 NC_015914.1 2608167 2608778 D KEGG: fjo:Fjoh_0248 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2608167..2608778 Cyclobacterium marinum DSM 745 11036294 YP_004774216.1 CDS Cycma_2243 NC_015914.1 2608782 2608949 R hypothetical protein complement(2608782..2608949) Cyclobacterium marinum DSM 745 11036295 YP_004774217.1 CDS Cycma_2244 NC_015914.1 2608975 2609610 R PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: MORN variant repeat-containing protein; PFAM: MORN variant; SPTR: uncharacterized protein; MORN repeat-containing protein complement(2608975..2609610) Cyclobacterium marinum DSM 745 11036296 YP_004774218.1 CDS Cycma_2245 NC_015914.1 2609614 2610360 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2609614..2610360) Cyclobacterium marinum DSM 745 11036297 YP_004774219.1 CDS Cycma_2246 NC_015914.1 2610539 2611258 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: sur:STAUR_2747 sterol desaturase; PFAM: Fatty acid hydroxylase; SPTR: desaturase; fatty acid hydroxylase 2610539..2611258 Cyclobacterium marinum DSM 745 11036298 YP_004774220.1 CDS Cycma_2247 NC_015914.1 2611262 2613127 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013747; KEGG: cpi:Cpin_2173 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; 3-oxoacyl-ACP synthase 2611262..2613127 Cyclobacterium marinum DSM 745 11036299 YP_004774221.1 CDS Cycma_2248 NC_015914.1 2613134 2614030 D KEGG: sur:STAUR_2746 hypothetical protein; SPTR: Conserved uncharacterized protein; hypothetical protein 2613134..2614030 Cyclobacterium marinum DSM 745 11036300 YP_004774222.1 CDS Cycma_2249 NC_015914.1 2614113 2615108 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149:IPR014188; KEGG: cpb:Cphamn1_1510 quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase, zinc-containing; TIGRFAM: Quinone oxidoreductase , YhdH/YhfP; YhdH/YhfP family quinone oxidoreductase complement(2614113..2615108) Cyclobacterium marinum DSM 745 11036301 YP_004774223.1 CDS Cycma_2250 NC_015914.1 2615402 2615779 R PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cpi:Cpin_0639 HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: transcriptional regulator; HxlR family transcriptional regulator complement(2615402..2615779) Cyclobacterium marinum DSM 745 11036302 YP_004774224.1 CDS Cycma_2251 NC_015914.1 2615939 2616784 D PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: psn:Pedsa_0619 male sterility domain protein; SPTR: Male sterility domain protein; male sterility domain-containing protein 2615939..2616784 Cyclobacterium marinum DSM 745 11036303 YP_004774225.1 CDS Cycma_2252 NC_015914.1 2616996 2617991 R PFAM: Ion channel; KEGG: gfo:GFO_1177 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2616996..2617991) Cyclobacterium marinum DSM 745 11036304 YP_004774226.1 CDS Cycma_2253 NC_015914.1 2618392 2619144 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: hse:Hsero_3977 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: oxidoreductase; short-chain dehydrogenase/reductase SDR complement(2618392..2619144) Cyclobacterium marinum DSM 745 11036305 YP_004774227.1 CDS Cycma_2254 NC_015914.1 2619153 2620118 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: reh:H16_A1557 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase complement(2619153..2620118) Cyclobacterium marinum DSM 745 11036306 YP_004774228.1 CDS Cycma_2255 NC_015914.1 2620135 2621496 R PFAM: GntP family permease; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: dfe:Dfer_1410 gluconate transporter; PFAM: Gluconate transporter; SPTR: GntP family permease; gluconate transporter complement(2620135..2621496) Cyclobacterium marinum DSM 745 11036307 YP_004774229.1 CDS Cycma_2256 NC_015914.1 2621668 2622390 D PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: mtt:Ftrac_2499 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00730; hypothetical protein 2621668..2622390 Cyclobacterium marinum DSM 745 11036308 YP_004774230.1 CDS Cycma_2257 NC_015914.1 2622446 2623336 D PFAM: Transglycosylase SLT domain; InterPro IPR008258; KEGG: zpr:ZPR_2042 lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Lytic murein transglycosylase; lytic transglycosylase 2622446..2623336 Cyclobacterium marinum DSM 745 11036309 YP_004774231.1 CDS Cycma_2258 NC_015914.1 2623397 2625064 D KEGG: phe:Phep_0258 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2623397..2625064 Cyclobacterium marinum DSM 745 11036310 YP_004774232.1 CDS Cycma_2259 NC_015914.1 2625319 2628165 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439:IPR004602; KEGG: mtt:Ftrac_1714 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; excinuclease ABC subunit A 2625319..2628165 Cyclobacterium marinum DSM 745 11036311 YP_004774233.1 CDS Cycma_2260 NC_015914.1 2628553 2630055 D KEGG: mtt:Ftrac_2804 hypothetical protein; SPTR: outer membrane lipoprotein; hypothetical protein 2628553..2630055 Cyclobacterium marinum DSM 745 11036312 YP_004774234.1 CDS Cycma_2261 NC_015914.1 2630152 2633028 D PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2803 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: outer membrane protein; TonB-dependent receptor 2630152..2633028 Cyclobacterium marinum DSM 745 11036313 YP_004774235.1 CDS Cycma_2262 NC_015914.1 2633193 2633954 D KEGG: mtt:Ftrac_3129 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2633193..2633954 Cyclobacterium marinum DSM 745 11036314 YP_004774236.1 CDS Cycma_2263 NC_015914.1 2634293 2635726 R PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR015391:IPR000297; KEGG: mtt:Ftrac_1859 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase (Survival protein); PpiC-type peptidyl-prolyl cis-trans isomerase complement(2634293..2635726) Cyclobacterium marinum DSM 745 11036315 YP_004774237.1 CDS Cycma_2264 NC_015914.1 2635704 2636606 R KEGG: mtt:Ftrac_1858 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2635704..2636606) Cyclobacterium marinum DSM 745 11036316 YP_004774238.1 CDS Cycma_2265 NC_015914.1 2636563 2638572 R PFAM: PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: chu:CHU_0192 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PPIC-type PPIASE domain protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2636563..2638572) Cyclobacterium marinum DSM 745 11036317 YP_004774239.1 CDS Cycma_2266 NC_015914.1 2638662 2639078 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro IPR003594; KEGG: mtt:Ftrac_1856 hypothetical protein; PFAM: ATP-binding region, ATPase-like; SPTR: anti-sigma B factor; ATP-binding protein complement(2638662..2639078) Cyclobacterium marinum DSM 745 11036318 YP_004774240.1 CDS Cycma_2267 NC_015914.1 2639068 2639412 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: mtt:Ftrac_1855 anti-anti-sigma factor; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; anti-anti-sigma factor complement(2639068..2639412) Cyclobacterium marinum DSM 745 11036319 YP_004774241.1 CDS Cycma_2268 NC_015914.1 2639444 2641513 R PFAM: Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932:IPR010822; KEGG: mtt:Ftrac_1854 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Protein serine/threonine phosphatase; Ser/Thr phosphatase complement(2639444..2641513) Cyclobacterium marinum DSM 745 11036320 YP_004774242.1 CDS Cycma_2269 NC_015914.1 2641734 2641856 R hypothetical protein complement(2641734..2641856) Cyclobacterium marinum DSM 745 11036321 YP_004774243.1 CDS Cycma_2270 NC_015914.1 2641889 2643121 R PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR006311; KEGG: dfe:Dfer_2440 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein; selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein complement(2641889..2643121) Cyclobacterium marinum DSM 745 11036322 YP_004774244.1 CDS Cycma_2271 NC_015914.1 2643287 2643958 D PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: sli:Slin_3912 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: uncharacterized protein; hypothetical protein 2643287..2643958 Cyclobacterium marinum DSM 745 11036323 YP_004774245.1 CDS Cycma_2272 NC_015914.1 2643983 2645287 R PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: mtt:Ftrac_0054 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; SPTR: Deoxyribodipyrimidine photolyase; DNA photolyase FAD-binding protein complement(2643983..2645287) Cyclobacterium marinum DSM 745 11036324 YP_004774246.1 CDS Cycma_2273 NC_015914.1 2645327 2649928 R KEGG: mtt:Ftrac_0055 hypothetical protein; SPTR: outer membrane insertion C-signal; hypothetical protein complement(2645327..2649928) Cyclobacterium marinum DSM 745 11036325 YP_004774247.1 CDS Cycma_2274 NC_015914.1 2649939 2650955 D PFAM: Glycoprotease; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: O-sialoglycoprotein endopeptidase; InterPro IPR000905:IPR017861; KEGG: dfe:Dfer_3012 metalloendopeptidase, glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; O-sialoglycoprotein endopeptidase 2649939..2650955 Cyclobacterium marinum DSM 745 11036326 YP_004774248.1 CDS Cycma_2275 NC_015914.1 2650948 2651412 D PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: lby:Lbys_2545 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 2650948..2651412 Cyclobacterium marinum DSM 745 11036327 YP_004774249.1 CDS Cycma_2276 NC_015914.1 2651378 2652193 D PFAM: NlpC/P60 family; KEGG: mtt:Ftrac_0059 nlp/p60 protein; SPTR: uncharacterized protein; hypothetical protein 2651378..2652193 Cyclobacterium marinum DSM 745 11036328 YP_004774250.1 CDS Cycma_2277 NC_015914.1 2652193 2652711 D PFAM: HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR003615:IPR002711; KEGG: mtt:Ftrac_0060 hnh endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein; HNH endonuclease 2652193..2652711 Cyclobacterium marinum DSM 745 11036329 YP_004774251.1 CDS Cycma_2278 NC_015914.1 2652893 2654674 D PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0539 Ribosomal protein S1; InterPro IPR003029; KEGG: mtt:Ftrac_0855 SSU ribosomal protein s1p; PFAM: Ribosomal protein S1, RNA binding domain; SPTR: Ribosomal protein S1; RNA binding S1 domain-containing protein 2652893..2654674 Cyclobacterium marinum DSM 745 11036330 YP_004774252.1 CDS Cycma_2279 NC_015914.1 2655227 2657524 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910; KEGG: lby:Lbys_1558 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor plug 2655227..2657524 Cyclobacterium marinum DSM 745 11036331 YP_004774253.1 CDS Cycma_2280 NC_015914.1 2657524 2658003 D PFAM: Protein of unknown function, DUF255; KEGG: cao:Celal_0334 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2657524..2658003 Cyclobacterium marinum DSM 745 11036332 YP_004774254.1 CDS Cycma_2281 NC_015914.1 2658845 2660113 D PFAM: Class III cytochrome C family; Cytochrome c; InterPro IPR003088; KEGG: mtt:Ftrac_3686 quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit; PFAM: Cytochrome c, class I; SPTR: Cytochrome c; cytochrome c class I 2658845..2660113 Cyclobacterium marinum DSM 745 11036334 YP_004774255.1 CDS Cycma_2282 NC_015914.1 2660146 2663244 D COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311; KEGG: mtt:Ftrac_3687 quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; SPTR: iron-sulfur binding oxidoreductase; quinol:cytochrome c oxidoreductase iron-sulfur protein 2660146..2663244 Cyclobacterium marinum DSM 745 11036335 YP_004774256.1 CDS Cycma_2283 NC_015914.1 2663264 2664628 D PFAM: Polysulphide reductase, NrfD; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: mtt:Ftrac_3688 quinol:cytochrome c oxidoreductase quinone-binding subunit 1; PFAM: Polysulphide reductase, NrfD; SPTR: Oxidoreductase membrane subunit, NrfD family; polysulfide reductase NrfD 2663264..2664628 Cyclobacterium marinum DSM 745 11036336 YP_004774257.1 CDS Cycma_2284 NC_015914.1 2664631 2665161 D PFAM: Protein of unknown function (DUF3341); KEGG: mtt:Ftrac_3689 quinol:cytochrome c oxidoreductase membrane protein; SPTR: uncharacterized protein; quinol:cytochrome c oxidoreductase membrane protein 2664631..2665161 Cyclobacterium marinum DSM 745 11036337 YP_004774258.1 CDS Cycma_2285 NC_015914.1 2665176 2665802 D PFAM: Cytochrome c; KEGG: mtt:Ftrac_3690 cytochrome c family protein; SPTR: Cytochrome c family protein; cytochrome c family protein 2665176..2665802 Cyclobacterium marinum DSM 745 11036338 YP_004774259.1 CDS Cycma_2286 NC_015914.1 2665802 2667085 D KEGG: mtt:Ftrac_3691 quinol:cytochrome c oxidoreductase quinone-binding subunit 2; SPTR: Membrane protein; quinol:cytochrome c oxidoreductase quinone-binding subunit 2 2665802..2667085 Cyclobacterium marinum DSM 745 11036339 YP_004774260.1 CDS Cycma_2287 NC_015914.1 2667110 2668141 D PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429; KEGG: mtt:Ftrac_3692 cytochrome c oxidase subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; SPTR: Heme/copper-type cytochrome/quinol oxidase, subunit 2; cytochrome c oxidase subunit II 2667110..2668141 Cyclobacterium marinum DSM 745 11036340 YP_004774261.1 CDS Cycma_2288 NC_015914.1 2668167 2670059 D PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: mtt:Ftrac_3693 cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 2668167..2670059 Cyclobacterium marinum DSM 745 11036341 YP_004774262.1 CDS Cycma_2289 NC_015914.1 2670040 2671125 D PFAM: Cytochrome oxidase assembly protein; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: mtt:Ftrac_3694 cytochrome oxidase assembly; PFAM: Cytochrome oxidase assembly; SPTR: Cytochrome oxidase assembly protein; cytochrome oxidase assembly 2670040..2671125 Cyclobacterium marinum DSM 745 11036342 YP_004774263.1 CDS Cycma_2290 NC_015914.1 2671128 2672030 D PFAM: UbiA prenyltransferase; TIGRFAM: protoheme IX farnesyltransferase; COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); HAMAP: Protohaem IX farnesyltransferase; InterPro IPR006369:IPR000537; KEGG: mtt:Ftrac_3695 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; protoheme IX farnesyltransferase 2671128..2672030 Cyclobacterium marinum DSM 745 11036343 YP_004774264.1 CDS Cycma_2291 NC_015914.1 2672032 2672613 D PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: mtt:Ftrac_3696 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 2672032..2672613 Cyclobacterium marinum DSM 745 11036344 YP_004774265.1 CDS Cycma_2292 NC_015914.1 2672636 2673406 D PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: mtt:Ftrac_3697 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 2672636..2673406 Cyclobacterium marinum DSM 745 11036345 YP_004774266.1 CDS Cycma_2293 NC_015914.1 2673426 2673752 D KEGG: mtt:Ftrac_3698 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2673426..2673752 Cyclobacterium marinum DSM 745 11036346 YP_004774267.1 CDS Cycma_2294 NC_015914.1 2673831 2674493 D PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: sli:Slin_5677 electron transporter SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: SCO1/SenC family protein; electron transport protein SCO1/SenC 2673831..2674493 Cyclobacterium marinum DSM 745 11036347 YP_004774268.1 CDS Cycma_2295 NC_015914.1 2674480 2675034 D PFAM: Protein of unknown function (DUF420); COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: sli:Slin_5678 hypothetical protein; PFAM: Protein of unknown function DUF420; SPTR: Membrane protein; hypothetical protein 2674480..2675034 Cyclobacterium marinum DSM 745 11036348 YP_004774269.1 CDS Cycma_2296 NC_015914.1 2675098 2675346 D KEGG: mtt:Ftrac_3701 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2675098..2675346 Cyclobacterium marinum DSM 745 11036349 YP_004774270.1 CDS Cycma_2297 NC_015914.1 2675631 2679266 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003661:IPR003594:IPR003660; KEGG: sli:Slin_3020 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: His Kinase A (Phosphoacceptor) domain protein; integral membrane sensor signal transduction histidine kinase 2675631..2679266 Cyclobacterium marinum DSM 745 11036350 YP_004774271.1 CDS Cycma_2298 NC_015914.1 2679315 2682791 D KEGG: chu:CHU_2196 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2679315..2682791 Cyclobacterium marinum DSM 745 11036351 YP_004774272.1 CDS Cycma_2299 NC_015914.1 2682869 2683573 D PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: mtt:Ftrac_3478 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 2682869..2683573 Cyclobacterium marinum DSM 745 11036352 YP_004774273.1 CDS Cycma_2300 NC_015914.1 2683577 2685568 D PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; InterPro IPR004588; KEGG: chu:CHU_2192 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2683577..2685568 Cyclobacterium marinum DSM 745 11036353 YP_004774274.1 CDS Cycma_2301 NC_015914.1 2685599 2685787 D KEGG: dfe:Dfer_0460 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 2685599..2685787 Cyclobacterium marinum DSM 745 11036354 YP_004774275.1 CDS Cycma_2302 NC_015914.1 2685787 2686137 D PFAM: Protein of unknown function (DUF419); COGs: COG2315 conserved hypothetical protein; InterPro IPR007351; KEGG: mtt:Ftrac_0023 hypothetical protein; SPTR: Hypothetical Cytosolic Protein; hypothetical protein 2685787..2686137 Cyclobacterium marinum DSM 745 11036355 YP_004774276.1 CDS Cycma_2303 NC_015914.1 2686134 2687102 D PFAM: ABC transporter; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: lby:Lbys_1593 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Spermidine/putrescine import ATP-binding protein PotA; ABC transporter 2686134..2687102 Cyclobacterium marinum DSM 745 11036356 YP_004774277.1 CDS Cycma_2304 NC_015914.1 2687117 2687614 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; KEGG: dfe:Dfer_1067 peptidylprolyl isomerase (FKBP-type peptidyl-prolyl cis-trans isomerase); SPTR: Peptidyl-prolyl cis-trans isomerase SlyD, FKBP-type; FKBP-type peptidylprolyl isomerase complement(2687117..2687614) Cyclobacterium marinum DSM 745 11036357 YP_004774278.1 CDS Cycma_2305 NC_015914.1 2687752 2688135 D PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase; COGs: COG3254 conserved hypothetical protein; InterPro IPR008000:IPR013448; KEGG: sli:Slin_1807 L-rhamnose 1-epimerase; PFAM: Rhamnose mutarotase; SPTR: L-rhamnose 1-epimerase; TIGRFAM: L-rhamnose 1-epimerase; L-rhamnose 1-epimerase 2687752..2688135 Cyclobacterium marinum DSM 745 11036358 YP_004774279.1 CDS Cycma_2306 NC_015914.1 2688160 2690967 D PFAM: Glycosyl hydrolases family 2, sugar binding domain; InterPro IPR006104; KEGG: shg:Sph21_0466 glycoside hydrolase 2 sugar binding protein; PFAM: Glycoside hydrolase 2, carbohydrate-binding; SPTR: uncharacterized protein; glycoside hydrolase 2688160..2690967 Cyclobacterium marinum DSM 745 11036359 YP_004774280.1 CDS Cycma_2307 NC_015914.1 2691081 2692130 D PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: zpr:ZPR_1548 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: transcriptional regulator; GntR family transcriptional regulator 2691081..2692130 Cyclobacterium marinum DSM 745 11036360 YP_004774281.1 CDS Cycma_2308 NC_015914.1 2692258 2693646 D COGs: COG1457 Purine-cytosine permease and related protein; KEGG: rmr:Rmar_0690 transmembrane prediction; SPTR: nucleoside transport protein; hypothetical protein 2692258..2693646 Cyclobacterium marinum DSM 745 11036361 YP_004774282.1 CDS Cycma_2309 NC_015914.1 2693643 2693828 D KEGG: pbs:Plabr_3136 hypothetical protein; hypothetical protein 2693643..2693828 Cyclobacterium marinum DSM 745 11036362 YP_004774283.1 CDS Cycma_2310 NC_015914.1 2693989 2697984 D SPTR: uncharacterized protein; hypothetical protein 2693989..2697984 Cyclobacterium marinum DSM 745 11036363 YP_004774284.1 CDS Cycma_2311 NC_015914.1 2698246 2698848 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_2180 RNA polymerase, sigma subunit, ecf family; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2698246..2698848 Cyclobacterium marinum DSM 745 11036364 YP_004774285.1 CDS Cycma_2312 NC_015914.1 2698823 2699056 D KEGG: dfe:Dfer_3626 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2698823..2699056 Cyclobacterium marinum DSM 745 11036365 YP_004774286.1 CDS Cycma_2313 NC_015914.1 2699527 2700216 D PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651:IPR005759; KEGG: mtt:Ftrac_2182 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SPTR: Endonuclease III; TIGRFAM: Endonuclease III/Nth; endonuclease III 2699527..2700216 Cyclobacterium marinum DSM 745 11036366 YP_004774287.1 CDS Cycma_2314 NC_015914.1 2700216 2702021 D PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583:IPR001962; KEGG: chu:CHU_3693 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; SPTR: Asparagine synthetase B; asparagine synthase 2700216..2702021 Cyclobacterium marinum DSM 745 11036367 YP_004774288.1 CDS Cycma_2315 NC_015914.1 2702018 2703193 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mtt:Ftrac_2787 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: A-glycosyltransferase-related protein, glycosyltransferase 4 protein; group 1 glycosyl transferase 2702018..2703193 Cyclobacterium marinum DSM 745 11036368 YP_004774289.1 CDS Cycma_2316 NC_015914.1 2703285 2704292 R TIGRFAM: gliding motility-associated lipoprotein GldB; InterPro IPR019853; KEGG: aas:Aasi_0778 hypothetical protein; SPTR: Gliding motility-associated lipoprotein GldB; TIGRFAM: Gliding motility-associated lipoprotein, GldB; gliding motility-associated lipoprotein GldB complement(2703285..2704292) Cyclobacterium marinum DSM 745 11036369 YP_004774290.1 CDS Cycma_2317 NC_015914.1 2704624 2705565 D PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: dfe:Dfer_1823 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Fasciclin domain protein; beta-Ig-H3/fasciclin 2704624..2705565 Cyclobacterium marinum DSM 745 11036370 YP_004774291.1 CDS Cycma_2318 NC_015914.1 2705854 2708511 D PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: psn:Pedsa_3227 polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: capsule polysaccharide export protein; polysaccharide export protein 2705854..2708511 Cyclobacterium marinum DSM 745 11036371 YP_004774292.1 CDS Cycma_2319 NC_015914.1 2708514 2709596 D PFAM: Chain length determinant protein; InterPro IPR003856; KEGG: psn:Pedsa_3229 lipopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: uncharacterized protein; lipopolysaccharide biosynthesis protein 2708514..2709596 Cyclobacterium marinum DSM 745 11036372 YP_004774293.1 CDS Cycma_2320 NC_015914.1 2709612 2710925 D PFAM: Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: dte:Dester_1359 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 2709612..2710925 Cyclobacterium marinum DSM 745 11036373 YP_004774294.1 CDS Cycma_2321 NC_015914.1 2710894 2711799 D PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mfv:Mfer_1072 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Rhamnosyl transferase; family 2 glycosyl transferase 2710894..2711799 Cyclobacterium marinum DSM 745 11036374 YP_004774295.1 CDS Cycma_2322 NC_015914.1 2711796 2713220 D SPTR: uncharacterized protein; hypothetical protein 2711796..2713220 Cyclobacterium marinum DSM 745 11036456 YP_004774296.1 CDS Cycma_2323 NC_015914.1 2713217 2714350 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mae:Maeo_0394 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 2713217..2714350 Cyclobacterium marinum DSM 745 11036457 YP_004774297.1 CDS Cycma_2324 NC_015914.1 2714343 2715044 D PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: hypothetical protein; SPTR: Galactoside O-acetyltransferase; hypothetical protein 2714343..2715044 Cyclobacterium marinum DSM 745 11036458 YP_004774298.1 CDS Cycma_2325 NC_015914.1 2715227 2716378 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ytcC; glucosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 2715227..2716378 Cyclobacterium marinum DSM 745 11036459 YP_004774299.1 CDS Cycma_2326 NC_015914.1 2716397 2717554 D PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR015393:IPR001296; KEGG: geb:GM18_2243 hypothetical protein; PFAM: Protein of unknown function DUF1972; Glycosyl transferase, group 1; SPTR: Glycosyl transferase; hypothetical protein 2716397..2717554 Cyclobacterium marinum DSM 745 11036460 YP_004774300.1 CDS Cycma_2327 NC_015914.1 2718122 2719489 D PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: cat:CA2559_02960 glycosyltransferase; PFAM: Bacterial sugar transferase; SPTR: Glycosyltransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2718122..2719489 Cyclobacterium marinum DSM 745 11036461 YP_004774301.1 CDS Cycma_2328 NC_015914.1 2719555 2720466 R PFAM: Universal stress protein family; InterPro IPR006016; KEGG: mtt:Ftrac_2644 UspA domain-containing protein; PFAM: UspA; SPTR: universal stress protein; UspA domain-containing protein complement(2719555..2720466) Cyclobacterium marinum DSM 745 11036462 YP_004774302.1 CDS Cycma_2329 NC_015914.1 2720726 2721277 D PFAM: 2',5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051; KEGG: mtt:Ftrac_2577 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; SPTR: 2',5' RNA ligase; phosphoesterase HXTX 2720726..2721277 Cyclobacterium marinum DSM 745 11036463 YP_004774303.1 CDS Cycma_2330 NC_015914.1 2721761 2724769 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent/ligand-gated channel; TonB-dependent receptor plug 2721761..2724769 Cyclobacterium marinum DSM 745 11036464 YP_004774304.1 CDS Cycma_2331 NC_015914.1 2724782 2726209 D PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2724782..2726209 Cyclobacterium marinum DSM 745 11036465 YP_004774305.1 CDS Cycma_2332 NC_015914.1 2726260 2726751 R KEGG: phe:Phep_3467 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2726260..2726751) Cyclobacterium marinum DSM 745 11036466 YP_004774306.1 CDS Cycma_2333 NC_015914.1 2726844 2727425 D KEGG: mtt:Ftrac_1744 hypothetical protein; SPTR: Membrane protein; hypothetical protein 2726844..2727425 Cyclobacterium marinum DSM 745 11036467 YP_004774307.1 CDS Cycma_2334 NC_015914.1 2727536 2729863 D PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; KEGG: cpi:Cpin_1880 aminopeptidase; SPTR: aminopeptidase; aminopeptidase 2727536..2729863 Cyclobacterium marinum DSM 745 11036468 YP_004774308.1 CDS Cycma_2335 NC_015914.1 2730255 2731487 R PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; ammonium transporter complement(2730255..2731487) Cyclobacterium marinum DSM 745 11036469 YP_004774309.1 CDS Cycma_2336 NC_015914.1 2731543 2731881 R PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: sgy:Sgly_1830 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2731543..2731881) Cyclobacterium marinum DSM 745 11036470 YP_004774310.1 CDS Cycma_2337 NC_015914.1 2732261 2733160 D PFAM: Nucleotidyl transferase; KEGG: lby:Lbys_1219 hypothetical protein; SPTR: Nucleotidyltransferase; hypothetical protein 2732261..2733160 Cyclobacterium marinum DSM 745 11036471 YP_004774311.1 CDS Cycma_2338 NC_015914.1 2733329 2733748 D PFAM: DoxX; InterPro IPR011637; KEGG: dfe:Dfer_3051 DoxX family protein; PFAM: DoxX; SPTR: uncharacterized protein; DoxX family protein 2733329..2733748 Cyclobacterium marinum DSM 745 11036472 YP_004774312.1 CDS Cycma_2339 NC_015914.1 2733751 2734857 R PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA replication and repair protein recF; InterPro IPR003395:IPR001238; KEGG: mtt:Ftrac_2511 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF; DNA replication and repair protein RecF complement(2733751..2734857) Cyclobacterium marinum DSM 745 11036473 YP_004774313.1 CDS Cycma_2340 NC_015914.1 2734872 2735984 D PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit; COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017:IPR017597; KEGG: lby:Lbys_2059 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component; SPTR: Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit; TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 2734872..2735984 Cyclobacterium marinum DSM 745 11036474 YP_004774314.1 CDS Cycma_2341 NC_015914.1 2736166 2736786 R KEGG: pap:PSPA7_3748 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2736166..2736786) Cyclobacterium marinum DSM 745 11036475 YP_004774315.1 CDS Cycma_2342 NC_015914.1 2736940 2738079 D KEGG: shg:Sph21_3400 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2736940..2738079 Cyclobacterium marinum DSM 745 11036476 YP_004774316.1 CDS Cycma_2343 NC_015914.1 2738086 2738220 D hypothetical protein 2738086..2738220 Cyclobacterium marinum DSM 745 11036477 YP_004774317.1 CDS Cycma_2344 NC_015914.1 2738331 2738915 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: phe:Phep_1932 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2738331..2738915 Cyclobacterium marinum DSM 745 11036478 YP_004774318.1 CDS Cycma_2345 NC_015914.1 2738919 2739896 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_4790 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2738919..2739896 Cyclobacterium marinum DSM 745 11036479 YP_004774319.1 CDS Cycma_2346 NC_015914.1 2739931 2741697 D KEGG: shg:Sph21_3401 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2739931..2741697 Cyclobacterium marinum DSM 745 11036480 YP_004774320.1 CDS Cycma_2347 NC_015914.1 2741909 2742679 D PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: sli:Slin_4376 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; GntR family transcriptional regulator 2741909..2742679 Cyclobacterium marinum DSM 745 11036481 YP_004774321.1 CDS Cycma_2348 NC_015914.1 2742931 2744160 D PFAM: Major Facilitator Superfamily; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: sli:Slin_4383 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein 2742931..2744160 Cyclobacterium marinum DSM 745 11036482 YP_004774322.1 CDS Cycma_2349 NC_015914.1 2744246 2745739 D PFAM: L-arabinose isomerase; L-fucose isomerase, C-terminal domain; COGs: COG2160 L-arabinose isomerase; InterPro IPR015888; KEGG: sli:Slin_4382 L-fucose isomerase-like protein; PFAM: L-fucose isomerase-like, C-terminal; SPTR: L-fucose isomerase-like protein; L-fucose isomerase-like protein 2744246..2745739 Cyclobacterium marinum DSM 745 11036483 YP_004774323.1 CDS Cycma_2350 NC_015914.1 2745915 2747363 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: phe:Phep_2825 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 2745915..2747363 Cyclobacterium marinum DSM 745 11036484 YP_004774324.1 CDS Cycma_2351 NC_015914.1 2747400 2750369 D PFAM: Glycosyl hydrolases family 2, sugar binding domain; InterPro IPR006104; KEGG: phe:Phep_3492 family 2 glycoside hydrolase; PFAM: Glycoside hydrolase 2, carbohydrate-binding; SPTR: Glycoside hydrolase 2 sugar binding; glycoside hydrolase 2747400..2750369 Cyclobacterium marinum DSM 745 11036485 YP_004774325.1 CDS Cycma_2352 NC_015914.1 2750435 2752783 R PFAM: Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: gym:GYMC10_1006 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase; glycoside hydrolase complement(2750435..2752783) Cyclobacterium marinum DSM 745 11036486 YP_004774326.1 CDS Cycma_2353 NC_015914.1 2753137 2754102 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: cao:Celal_1830 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; TIGRFAM: Ribonuclease BN; ribonuclease BN complement(2753137..2754102) Cyclobacterium marinum DSM 745 11036487 YP_004774327.1 CDS Cycma_2354 NC_015914.1 2754809 2755186 D KEGG: cyh:Cyan8802_4372 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2754809..2755186 Cyclobacterium marinum DSM 745 11036488 YP_004774328.1 CDS Cycma_2355 NC_015914.1 2755986 2757320 D PFAM: Phage integrase; InterPro IPR002104; KEGG: ppn:Palpr_1979 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; integrase 2755986..2757320 Cyclobacterium marinum DSM 745 11036489 YP_004774329.1 CDS Cycma_2356 NC_015914.1 2757327 2758097 D hypothetical protein 2757327..2758097 Cyclobacterium marinum DSM 745 11036490 YP_004774330.1 CDS Cycma_2357 NC_015914.1 2758189 2758476 D KEGG: ppn:Palpr_1961 hypothetical protein; SPTR: DNA binding domain protein, excisionase; hypothetical protein 2758189..2758476 Cyclobacterium marinum DSM 745 11036491 YP_004774331.1 CDS Cycma_2358 NC_015914.1 2758481 2758708 D hypothetical protein 2758481..2758708 Cyclobacterium marinum DSM 745 11036492 YP_004774332.1 CDS Cycma_2359 NC_015914.1 2758705 2760252 D PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain; COGs: COG3378 ATPase; InterPro IPR014818:IPR006500; KEGG: sli:Slin_3095 P4 family phage/plasmid primase; PFAM: Phage/plasmid primase, P4, C-terminal; SPTR: Phage/plasmid primase, P4 family, C-terminal domain protein; TIGRFAM: DNA primase, phage/plasmid; phage/plasmid primase, P4 family 2758705..2760252 Cyclobacterium marinum DSM 745 11036493 YP_004774333.1 CDS Cycma_2360 NC_015914.1 2760277 2761398 D KEGG: sli:Slin_3094 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2760277..2761398 Cyclobacterium marinum DSM 745 11036494 YP_004774334.1 CDS Cycma_2361 NC_015914.1 2761655 2762479 D KEGG: pkn:PKH_143120 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2761655..2762479 Cyclobacterium marinum DSM 745 11036495 YP_004774335.1 CDS Cycma_2362 NC_015914.1 2762645 2763034 D hypothetical protein 2762645..2763034 Cyclobacterium marinum DSM 745 11036496 YP_004774336.1 CDS Cycma_2363 NC_015914.1 2763127 2763552 D hypothetical protein 2763127..2763552 Cyclobacterium marinum DSM 745 11036497 YP_004774337.1 CDS Cycma_2364 NC_015914.1 2763919 2764230 R KEGG: ran:Riean_1236 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2763919..2764230) Cyclobacterium marinum DSM 745 11036498 YP_004774338.1 CDS Cycma_2365 NC_015914.1 2764926 2765816 D PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR005662:IPR002917:IPR004044:IPR005225; KEGG: cat:CA2559_01555 GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; GTP-binding protein Era 2764926..2765816 Cyclobacterium marinum DSM 745 11036500 YP_004774339.1 CDS Cycma_2366 NC_015914.1 2765828 2767141 D PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR016484:IPR002917:IPR005225; KEGG: mtt:Ftrac_1697 ribosome-associated GTPase EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; GTP-binding protein engA 2765828..2767141 Cyclobacterium marinum DSM 745 11036501 YP_004774340.1 CDS Cycma_2367 NC_015914.1 2767150 2767689 D KEGG: gfo:GFO_1893 secreted protein; hypothetical protein 2767150..2767689 Cyclobacterium marinum DSM 745 11036502 YP_004774341.1 CDS Cycma_2368 NC_015914.1 2767784 2768434 R PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: fba:FIC_01344 ribosomal RNA small subunit methyltransferase G; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; ribosomal RNA small subunit methyltransferase G complement(2767784..2768434) Cyclobacterium marinum DSM 745 11036503 YP_004774342.1 CDS Cycma_2369 NC_015914.1 2768440 2769051 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_0310 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor SigW; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2768440..2769051) Cyclobacterium marinum DSM 745 11036504 YP_004774343.1 CDS Cycma_2370 NC_015914.1 2769042 2770169 R PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: sli:Slin_4080 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: B-glycosyltransferase-related protein, glycosyltransferase 2 protein; family 2 glycosyl transferase complement(2769042..2770169) Cyclobacterium marinum DSM 745 11036505 YP_004774344.1 CDS Cycma_2371 NC_015914.1 2770458 2771588 D PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: psn:Pedsa_1842 tRNA-guanine transglycosylase; PFAM: Queuine/other tRNA-ribosyltransferase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 2770458..2771588 Cyclobacterium marinum DSM 745 11036506 YP_004774345.1 CDS Cycma_2372 NC_015914.1 2771643 2772716 D PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: mtt:Ftrac_0313 permease yjgp/yjgq family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Membrane protein; YjgP/YjgQ family permease 2771643..2772716 Cyclobacterium marinum DSM 745 11036507 YP_004774346.1 CDS Cycma_2373 NC_015914.1 2772726 2773631 D PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: mtt:Ftrac_0314 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Membrane protein; hypothetical protein 2772726..2773631 Cyclobacterium marinum DSM 745 11036508 YP_004774347.1 CDS Cycma_2374 NC_015914.1 2773692 2774501 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR004424:IPR006204:IPR013750; KEGG: cpi:Cpin_3757 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(2773692..2774501) Cyclobacterium marinum DSM 745 11036509 YP_004774348.1 CDS Cycma_2375 NC_015914.1 2775043 2776725 D PFAM: Dehydratase; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR004404:IPR000581; KEGG: dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 2775043..2776725 Cyclobacterium marinum DSM 745 11036510 YP_004774349.1 CDS Cycma_2376 NC_015914.1 2776731 2778425 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: rbi:RB2501_14419 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: Acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; acetolactate synthase large subunit, biosynthetic type 2776731..2778425 Cyclobacterium marinum DSM 745 11036511 YP_004774350.1 CDS Cycma_2377 NC_015914.1 2778431 2778931 D PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: wvi:Weevi_0073 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; acetolactate synthase small subunit 2778431..2778931 Cyclobacterium marinum DSM 745 11036512 YP_004774351.1 CDS Cycma_2378 NC_015914.1 2778964 2780007 D PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013116:IPR000506:IPR013023; KEGG: dfe:Dfer_3679 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 2778964..2780007 Cyclobacterium marinum DSM 745 11036513 YP_004774352.1 CDS Cycma_2379 NC_015914.1 2780017 2781516 D PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005671; KEGG: bvu:BVU_2004 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase; TIGRFAM: Bacterial 2-isopropylmalate synthase; 2-isopropylmalate synthase 2780017..2781516 Cyclobacterium marinum DSM 745 11036514 YP_004774353.1 CDS Cycma_2380 NC_015914.1 2781539 2782960 D PFAM: Protein of unknown function (DUF521); Aconitase (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit region; InterPro IPR004430:IPR001030; KEGG: 3-isopropylmalate dehydratase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; 3-isopropylmalate dehydratase large subunit 2781539..2782960 Cyclobacterium marinum DSM 745 11036515 YP_004774354.1 CDS Cycma_2381 NC_015914.1 2782965 2783555 D PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; COGs: COG0066 3-isopropylmalate dehydratase small subunit; HAMAP: 3-isopropylmalate dehydratase, small subunit region; InterPro IPR004431:IPR000573; KEGG: psn:Pedsa_2357 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; 3-isopropylmalate dehydratase small subunit 2782965..2783555 Cyclobacterium marinum DSM 745 11036516 YP_004774355.1 CDS Cycma_2382 NC_015914.1 2783607 2785196 D PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709; KEGG: fjo:Fjoh_1305 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase; pyruvate carboxyltransferase 2783607..2785196 Cyclobacterium marinum DSM 745 11036517 YP_004774356.1 CDS Cycma_2383 NC_015914.1 2785165 2786235 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429:IPR001804; KEGG: cly:Celly_2756 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2785165..2786235 Cyclobacterium marinum DSM 745 11036518 YP_004774357.1 CDS Cycma_2384 NC_015914.1 2786312 2787133 R COGs: COG0623 Enoyl-(acyl-carrier-protein); KEGG: mtt:Ftrac_0317 enoyl-(acyl-carrier-protein) reductase (NADH); SPTR: enoyl-(Acyl-carrier-protein) reductase; enoyl-ACP reductase complement(2786312..2787133) Cyclobacterium marinum DSM 745 11036519 YP_004774358.1 CDS Cycma_2385 NC_015914.1 2787239 2788891 R PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR004604; KEGG: chu:CHU_3012 DNA repair protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; DNA repair protein RecN complement(2787239..2788891) Cyclobacterium marinum DSM 745 11036520 YP_004774359.1 CDS Cycma_2386 NC_015914.1 2788939 2789850 R KEGG: mtt:Ftrac_0973 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2788939..2789850) Cyclobacterium marinum DSM 745 11036521 YP_004774360.1 CDS Cycma_2387 NC_015914.1 2790010 2791239 R PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: sli:Slin_1305 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; SPTR: Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(2790010..2791239) Cyclobacterium marinum DSM 745 11036522 YP_004774361.1 CDS Cycma_2388 NC_015914.1 2791241 2791558 R KEGG: sli:Slin_1306 hypothetical protein; SPTR: DNA-directed RNA polymerase, omega subunit; hypothetical protein complement(2791241..2791558) Cyclobacterium marinum DSM 745 11036523 YP_004774362.1 CDS Cycma_2389 NC_015914.1 2791572 2792498 R TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: mtt:Ftrac_0970 outer membrane assembly lipoprotein yfio; SPTR: TPR repeat protein; TIGRFAM: Outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO complement(2791572..2792498) Cyclobacterium marinum DSM 745 11036524 YP_004774363.1 CDS Cycma_2390 NC_015914.1 2792564 2793277 R KEGG: mtt:Ftrac_0969 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2792564..2793277) Cyclobacterium marinum DSM 745 11036525 YP_004774364.1 CDS Cycma_2391 NC_015914.1 2793496 2795103 R InterPro IPR010664; KEGG: mtt:Ftrac_0968 hypothetical protein; PFAM: Protein of unknown function DUF1239; SPTR: uncharacterized protein; hypothetical protein complement(2793496..2795103) Cyclobacterium marinum DSM 745 11036526 YP_004774365.1 CDS Cycma_2392 NC_015914.1 2795153 2796493 D PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: tRNA(Ile)-lysidine synthase; InterPro IPR011063:IPR012795:IPR012796; KEGG: chu:CHU_3018 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; tRNA(Ile)-lysidine synthase 2795153..2796493 Cyclobacterium marinum DSM 745 11036527 YP_004774366.1 CDS Cycma_2393 NC_015914.1 2796477 2796992 D PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: mtt:Ftrac_0966 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein 2796477..2796992 Cyclobacterium marinum DSM 745 11036528 YP_004774367.1 CDS Cycma_2394 NC_015914.1 2797079 2798017 D PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR011275:IPR001236; KEGG: chu:CHU_3020 malate dehydrogenase (NAD); PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent; malate dehydrogenase 2797079..2798017 Cyclobacterium marinum DSM 745 11036529 YP_004774368.1 CDS Cycma_2395 NC_015914.1 2798118 2800835 D KEGG: mtt:Ftrac_3760 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2798118..2800835 Cyclobacterium marinum DSM 745 11036530 YP_004774369.1 CDS Cycma_2396 NC_015914.1 2800891 2802555 D PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_3759 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS 2800891..2802555 Cyclobacterium marinum DSM 745 11036531 YP_004774370.1 CDS Cycma_2397 NC_015914.1 2802726 2803457 D PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: gfo:GFO_3019 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2802726..2803457 Cyclobacterium marinum DSM 745 11036532 YP_004774371.1 CDS Cycma_2398 NC_015914.1 2803806 2804888 D PFAM: HlyD family secretion protein; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cao:Celal_3045 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; secretion protein HlyD family protein 2803806..2804888 Cyclobacterium marinum DSM 745 11036533 YP_004774372.1 CDS Cycma_2399 NC_015914.1 2804888 2806147 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_14528 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Lipoprotein releasing system transmembrane protein LolC; hypothetical protein 2804888..2806147 Cyclobacterium marinum DSM 745 11036534 YP_004774373.1 CDS Cycma_2400 NC_015914.1 2806148 2806831 D PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system, ATP-binding protein; ABC transporter 2806148..2806831 Cyclobacterium marinum DSM 745 11036535 YP_004774374.1 CDS Cycma_2401 NC_015914.1 2807074 2808156 D KEGG: bfr:BF4409 hypothetical protein; SPTR: exported protein; hypothetical protein 2807074..2808156 Cyclobacterium marinum DSM 745 11036536 YP_004774375.1 CDS Cycma_2402 NC_015914.1 2808301 2808900 D hypothetical protein 2808301..2808900 Cyclobacterium marinum DSM 745 11036618 YP_004774376.1 CDS Cycma_2403 NC_015914.1 2808938 2809699 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: mtt:Ftrac_3761 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Glucitol operon repressor; DeoR family transcriptional regulator complement(2808938..2809699) Cyclobacterium marinum DSM 745 11036619 YP_004774377.1 CDS Cycma_2404 NC_015914.1 2809797 2811359 D PFAM: FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: mtt:Ftrac_3762 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 2809797..2811359 Cyclobacterium marinum DSM 745 11036620 YP_004774378.1 CDS Cycma_2405 NC_015914.1 2811370 2812872 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR018484:IPR018485:IPR005999; KEGG: mtt:Ftrac_3763 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; glycerol kinase 2811370..2812872 Cyclobacterium marinum DSM 745 11036621 YP_004774379.1 CDS Cycma_2406 NC_015914.1 2812875 2813621 D PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: mtt:Ftrac_3764 major intrinsic protein; PFAM: Major intrinsic protein; SPTR: Major intrinsic protein; major intrinsic protein 2812875..2813621 Cyclobacterium marinum DSM 745 11036622 YP_004774380.1 CDS Cycma_2407 NC_015914.1 2813967 2815241 R PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR011923; KEGG: mtt:Ftrac_2252 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; rod shape-determining protein RodA complement(2813967..2815241) Cyclobacterium marinum DSM 745 11036623 YP_004774381.1 CDS Cycma_2408 NC_015914.1 2815242 2817044 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR017790; KEGG: aas:Aasi_0246 hypothetical protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; SPTR: Penicillin-binding protein 2; TIGRFAM: Penicillin-binding protein 2; penicillin-binding protein 2 complement(2815242..2817044) Cyclobacterium marinum DSM 745 11036624 YP_004774382.1 CDS Cycma_2409 NC_015914.1 2817045 2817566 R TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: mtt:Ftrac_2254 hypothetical protein; SPTR: rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; rod shape-determining protein MreD complement(2817045..2817566) Cyclobacterium marinum DSM 745 11036625 YP_004774383.1 CDS Cycma_2410 NC_015914.1 2817563 2818396 R PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221:IPR005223; KEGG: mtt:Ftrac_2255 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; rod shape-determining protein MreC complement(2817563..2818396) Cyclobacterium marinum DSM 745 11036626 YP_004774384.1 CDS Cycma_2411 NC_015914.1 2818404 2819432 R PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: mtt:Ftrac_2256 cell shape determining protein, MreB/mrl family; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein complement(2818404..2819432) Cyclobacterium marinum DSM 745 11036627 YP_004774385.1 CDS Cycma_2412 NC_015914.1 2819813 2821339 R PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR013982:IPR011607:IPR002695; KEGG: mtt:Ftrac_2257 phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; SMART: AICARFT/IMPCHase bienzyme, formylation region; SPTR: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: AICARFT/IMPCHase bienzyme; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2819813..2821339) Cyclobacterium marinum DSM 745 11036628 YP_004774386.1 CDS Cycma_2413 NC_015914.1 2821473 2822030 R PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376:IPR004607; KEGG: bth:BT_3360 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase complement(2821473..2822030) Cyclobacterium marinum DSM 745 11036629 YP_004774387.1 CDS Cycma_2414 NC_015914.1 2822113 2823060 R KEGG: dfe:Dfer_1397 glycosyl hydrolase 32 domain protein; SPTR: Glycosyl hydrolase 32 domain protein; glycosyl hydrolase domain-containing protein complement(2822113..2823060) Cyclobacterium marinum DSM 745 11036630 YP_004774388.1 CDS Cycma_2415 NC_015914.1 2823085 2823957 R PFAM: UbiA prenyltransferase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: mtt:Ftrac_2481 geranylgeranylglycerol-phosphate geranylgeranyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate-octaprenyltransferase; UbiA prenyltransferase complement(2823085..2823957) Cyclobacterium marinum DSM 745 11036631 YP_004774389.1 CDS Cycma_2416 NC_015914.1 2824050 2824832 R PFAM: Domain of unknown function (DUF2520); Rossmann-like domain; COGs: COG5495 conserved hypothetical protein; InterPro IPR004455:IPR018931; KEGG: mtt:Ftrac_2482 hypothetical protein; PFAM: Domain of unknown function DUF2520; NADP oxidoreductase, coenzyme F420-dependent; SPTR: uncharacterized protein; hypothetical protein complement(2824050..2824832) Cyclobacterium marinum DSM 745 11036632 YP_004774390.1 CDS Cycma_2417 NC_015914.1 2824907 2827435 R PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: mtt:Ftrac_2483 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein; cytochrome c assembly protein complement(2824907..2827435) Cyclobacterium marinum DSM 745 11036633 YP_004774391.1 CDS Cycma_2418 NC_015914.1 2827476 2827892 R PFAM: CcmE; KEGG: mtt:Ftrac_2484 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2827476..2827892) Cyclobacterium marinum DSM 745 11036634 YP_004774392.1 CDS Cycma_2419 NC_015914.1 2827896 2828138 R KEGG: mtt:Ftrac_2485 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2827896..2828138) Cyclobacterium marinum DSM 745 11036635 YP_004774393.1 CDS Cycma_2420 NC_015914.1 2828140 2828814 R PFAM: Cytochrome C assembly protein; InterPro IPR002541; KEGG: mtt:Ftrac_2486 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: heme exporter protein C; cytochrome c assembly protein complement(2828140..2828814) Cyclobacterium marinum DSM 745 11036636 YP_004774394.1 CDS Cycma_2421 NC_015914.1 2829472 2830137 R PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB; COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: sli:Slin_1448 cytochrome c biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: Heme exporter protein B; cytochrome c-type biogenesis protein CcmB complement(2829472..2830137) Cyclobacterium marinum DSM 745 11036637 YP_004774395.1 CDS Cycma_2422 NC_015914.1 2830317 2831342 D PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: dfe:Dfer_3986 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2830317..2831342 Cyclobacterium marinum DSM 745 11036638 YP_004774396.1 CDS Cycma_2423 NC_015914.1 2831538 2832815 R PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: mtt:Ftrac_2789 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; SPTR: Serine--tRNA ligase; TIGRFAM: Seryl-tRNA synthetase, class IIa; seryl-tRNA synthetase complement(2831538..2832815) Cyclobacterium marinum DSM 745 11036639 YP_004774397.1 CDS Cycma_2424 NC_015914.1 2832934 2833854 D PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: sus:Acid_6225 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: uncharacterized protein; LmbE family protein 2832934..2833854 Cyclobacterium marinum DSM 745 11036640 YP_004774398.1 CDS Cycma_2425 NC_015914.1 2833902 2834660 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_0415 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 2833902..2834660 Cyclobacterium marinum DSM 745 11036641 YP_004774399.1 CDS Cycma_2426 NC_015914.1 2834684 2835544 D PFAM: Fumarylacetoacetate (FAA) hydrolase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: zpr:ZPR_4369 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: Fumarylacetoacetate hydrolase; fumarylacetoacetate (FAA) hydrolase 2834684..2835544 Cyclobacterium marinum DSM 745 11036642 YP_004774400.1 CDS Cycma_2427 NC_015914.1 2835597 2836298 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: phe:Phep_3580 GntR domain-containing protein; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: GntR domain protein; GntR family transcriptional regulator complement(2835597..2836298) Cyclobacterium marinum DSM 745 11036643 YP_004774401.1 CDS Cycma_2428 NC_015914.1 2837003 2840224 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: phe:Phep_3579 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; TonB-dependent receptor plug 2837003..2840224 Cyclobacterium marinum DSM 745 11036644 YP_004774402.1 CDS Cycma_2429 NC_015914.1 2840252 2841736 D PFAM: SusD family; InterPro IPR012944; KEGG: phe:Phep_3578 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2840252..2841736 Cyclobacterium marinum DSM 745 11036645 YP_004774403.1 CDS Cycma_2430 NC_015914.1 2841776 2842942 D PFAM: BNR/Asp-box repeat; KEGG: phe:Phep_3583 BNR repeat-containing glycosyl hydrolase; SPTR: BNR repeat-containing glycosyl hydrolase; BNR repeat-containing glycosyl hydrolase 2841776..2842942 Cyclobacterium marinum DSM 745 11036646 YP_004774404.1 CDS Cycma_2431 NC_015914.1 2842988 2843794 D PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: cpe:CPE2321 hypothetical protein; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; G-D-S-L family lipolytic protein 2842988..2843794 Cyclobacterium marinum DSM 745 11036647 YP_004774405.1 CDS Cycma_2432 NC_015914.1 2843819 2844934 D PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: phe:Phep_3577 glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR repeat; SPTR: Glycosyl hydrolase BNR repeat-containing protein; glycosyl hydrolase family protein 2843819..2844934 Cyclobacterium marinum DSM 745 11036648 YP_004774406.1 CDS Cycma_2433 NC_015914.1 2844946 2846112 D PFAM: BNR/Asp-box repeat; KEGG: phe:Phep_3577 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; glycosyl hydrolase family protein 2844946..2846112 Cyclobacterium marinum DSM 745 11036649 YP_004774407.1 CDS Cycma_2434 NC_015914.1 2846116 2847663 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0172 N-sulfoglucosamine sulfohydrolase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 2846116..2847663 Cyclobacterium marinum DSM 745 11036650 YP_004774408.1 CDS Cycma_2435 NC_015914.1 2847665 2848783 D PFAM: BNR/Asp-box repeat; KEGG: phe:Phep_3577 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; glycosyl hydrolase family protein 2847665..2848783 Cyclobacterium marinum DSM 745 11036651 YP_004774409.1 CDS Cycma_2436 NC_015914.1 2848838 2849602 D PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: phe:Phep_3582 G-D-S-L family lipolytic protein; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 2848838..2849602 Cyclobacterium marinum DSM 745 11036652 YP_004774410.1 CDS Cycma_2437 NC_015914.1 2849609 2850505 D PFAM: Uncharacterized protein conserved in archaea (DUF2119); Succinylglutamate desuccinylase / Aspartoacylase; COGs: COG3608 deacylase; InterPro IPR007036; KEGG: phe:Phep_3576 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 2849609..2850505 Cyclobacterium marinum DSM 745 11036653 YP_004774411.1 CDS Cycma_2438 NC_015914.1 2850506 2851333 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: phe:Phep_3575 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2850506..2851333 Cyclobacterium marinum DSM 745 11036654 YP_004774412.1 CDS Cycma_2439 NC_015914.1 2851330 2852421 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926; KEGG: phe:Phep_3574 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Threonine synthase; manually curated; pyridoxal-5'-phosphate-dependent protein beta subunit 2851330..2852421 Cyclobacterium marinum DSM 745 11036655 YP_004774413.1 CDS Cycma_2440 NC_015914.1 2852441 2853346 D PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: phe:Phep_3573 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2852441..2853346 Cyclobacterium marinum DSM 745 11036656 YP_004774414.1 CDS Cycma_2441 NC_015914.1 2853496 2853876 D PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: phe:Phep_3572 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; endoribonuclease L-PSP 2853496..2853876 Cyclobacterium marinum DSM 745 11036657 YP_004774415.1 CDS Cycma_2442 NC_015914.1 2853866 2855362 D PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: phe:Phep_3571 microcystin LR degradation protein MlrC; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: Microcystin LR degradation protein MlrC; microcystin LR degradation protein MlrC 2853866..2855362 Cyclobacterium marinum DSM 745 11036658 YP_004774416.1 CDS Cycma_2443 NC_015914.1 2855359 2856228 D PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: phe:Phep_3570 SMP-30/gluconolaconase/LRE domain-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: SMP-30/Gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE-like region-containing protein 2855359..2856228 Cyclobacterium marinum DSM 745 11036659 YP_004774417.1 CDS Cycma_2444 NC_015914.1 2856248 2857234 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: bcs:BCAN_B0406 4,5,-dihydroxyphthalate dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase; oxidoreductase domain-containing protein 2856248..2857234 Cyclobacterium marinum DSM 745 11036660 YP_004774418.1 CDS Cycma_2445 NC_015914.1 2857264 2859822 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR006652:IPR001734; KEGG: fbc:FB2170_03920 hypothetical protein; PFAM: Sodium/solute symporter; Kelch repeat type 1; SPTR: uncharacterized protein; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein 2857264..2859822 Cyclobacterium marinum DSM 745 11036661 YP_004774419.1 CDS Cycma_2446 NC_015914.1 2860335 2861816 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR011782:IPR001254; KEGG: mtt:Ftrac_2444 protease do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: S1C (Protease Do) subfamily peptidase MucD; TIGRFAM: Peptidase S1C, Do; protease Do 2860335..2861816 Cyclobacterium marinum DSM 745 11036662 YP_004774420.1 CDS Cycma_2447 NC_015914.1 2862410 2862664 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: uncharacterized protein; excinuclease ABC subunit C 2862410..2862664 Cyclobacterium marinum DSM 745 11036665 YP_004774421.1 CDS Cycma_2448 NC_015914.1 2862661 2863014 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: uncharacterized protein; excinuclease ABC subunit C 2862661..2863014 Cyclobacterium marinum DSM 745 11036666 YP_004774422.1 CDS Cycma_2449 NC_015914.1 2863011 2863364 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: uncharacterized protein; excinuclease ABC subunit C 2863011..2863364 Cyclobacterium marinum DSM 745 11036667 YP_004774423.1 CDS Cycma_2450 NC_015914.1 2863368 2863721 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: uncharacterized protein; excinuclease ABC subunit C 2863368..2863721 Cyclobacterium marinum DSM 745 11036668 YP_004774424.1 CDS Cycma_2451 NC_015914.1 2863818 2864072 D PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: uncharacterized protein; excinuclease ABC subunit C 2863818..2864072 Cyclobacterium marinum DSM 745 11036669 YP_004774425.1 CDS Cycma_2452 NC_015914.1 2864069 2864422 D PFAM: GIY-YIG catalytic domain; KEGG: mtt:Ftrac_1589 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2864069..2864422 Cyclobacterium marinum DSM 745 11036670 YP_004774426.1 CDS Cycma_2453 NC_015914.1 2864592 2864684 R hypothetical protein complement(2864592..2864684) Cyclobacterium marinum DSM 745 11036671 YP_004774427.1 CDS Cycma_2454 NC_015914.1 2864850 2865515 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2864850..2865515 Cyclobacterium marinum DSM 745 11036672 YP_004774428.1 CDS Cycma_2455 NC_015914.1 2865630 2866535 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cao:Celal_4197 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR 2865630..2866535 Cyclobacterium marinum DSM 745 11036673 YP_004774429.1 CDS Cycma_2456 NC_015914.1 2866590 2870006 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2231 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug 2866590..2870006 Cyclobacterium marinum DSM 745 11036674 YP_004774430.1 CDS Cycma_2457 NC_015914.1 2870020 2871510 D PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_3918 hypothetical protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 2870020..2871510 Cyclobacterium marinum DSM 745 11036675 YP_004774431.1 CDS Cycma_2458 NC_015914.1 2871571 2873031 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_4498 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 2871571..2873031 Cyclobacterium marinum DSM 745 11036676 YP_004774432.1 CDS Cycma_2459 NC_015914.1 2873044 2874672 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01931 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 2873044..2874672 Cyclobacterium marinum DSM 745 11036677 YP_004774433.1 CDS Cycma_2460 NC_015914.1 2874872 2876092 D KEGG: psn:Pedsa_3753 GPI anchored protein; SPTR: uncharacterized protein; hypothetical protein 2874872..2876092 Cyclobacterium marinum DSM 745 11036678 YP_004774434.1 CDS Cycma_2461 NC_015914.1 2876114 2877940 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: phe:Phep_2526 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor complement(2876114..2877940) Cyclobacterium marinum DSM 745 11036679 YP_004774435.1 CDS Cycma_2462 NC_015914.1 2878188 2880140 D COGs: COG0308 Aminopeptidase N; KEGG: mtt:Ftrac_0558 peptidase; SPTR: aminopeptidase; peptidase 2878188..2880140 Cyclobacterium marinum DSM 745 11036680 YP_004774436.1 CDS Cycma_2463 NC_015914.1 2880208 2880609 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mtt:Ftrac_2750 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2880208..2880609) Cyclobacterium marinum DSM 745 11036681 YP_004774437.1 CDS Cycma_2464 NC_015914.1 2880732 2882363 R PFAM: Peptidase S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: mtt:Ftrac_0006 C-terminal processing peptidase-3; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl protease; TIGRFAM: Peptidase S41A, C-terminal protease; carboxyl-terminal protease complement(2880732..2882363) Cyclobacterium marinum DSM 745 11036682 YP_004774438.1 CDS Cycma_2465 NC_015914.1 2882538 2883296 D PFAM: Domain of Unknown function (DUF542); COGs: COG2846 Regulator of cell morphogenesis and NO signaling; InterPro IPR012312; KEGG: mtt:Ftrac_0007 hypothetical protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: uncharacterized protein; hemerythrin HHE cation binding domain-containing protein 2882538..2883296 Cyclobacterium marinum DSM 745 11036683 YP_004774439.1 CDS Cycma_2466 NC_015914.1 2883296 2883709 D PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); HAMAP: Holliday junction resolvase; InterPro IPR006641:IPR005227; KEGG: dfe:Dfer_4051 Holliday junction resolvase YqgF; PFAM: Resolvase, holliday junction-type, YqgF-like; SMART: Resolvase, RNase H-like fold; SPTR: Holliday junction resolvase; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase 2883296..2883709 Cyclobacterium marinum DSM 745 11036684 YP_004774440.1 CDS Cycma_2467 NC_015914.1 2883706 2884254 D PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: mtt:Ftrac_0009 peptide deformylase; PFAM: Formylmethionine deformylase; SPTR: Peptide deformylase 2; TIGRFAM: Formylmethionine deformylase; peptide deformylase 2883706..2884254 Cyclobacterium marinum DSM 745 11036685 YP_004774441.1 CDS Cycma_2468 NC_015914.1 2884291 2885082 D PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: mtt:Ftrac_1583 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2884291..2885082 Cyclobacterium marinum DSM 745 11036686 YP_004774442.1 CDS Cycma_2469 NC_015914.1 2885305 2887404 R KEGG: mtt:Ftrac_1585 fg-gap repeat protein; SPTR: uncharacterized protein; hypothetical protein complement(2885305..2887404) Cyclobacterium marinum DSM 745 11036687 YP_004774443.1 CDS Cycma_2470 NC_015914.1 2887621 2888913 D PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR005863:IPR000713:IPR013221:IPR004101; KEGG: dfe:Dfer_4530 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase 2887621..2888913 Cyclobacterium marinum DSM 745 11036688 YP_004774444.1 CDS Cycma_2471 NC_015914.1 2889274 2889741 D PFAM: DinB family; KEGG: bmd:BMD_3747 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2889274..2889741 Cyclobacterium marinum DSM 745 11036689 YP_004774445.1 CDS Cycma_2473 NC_015914.1 2891733 2893208 D PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: sde:Sde_0182 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: Cellulose-binding protein; hypothetical protein 2891733..2893208 Cyclobacterium marinum DSM 745 11036691 YP_004774446.1 CDS Cycma_2474 NC_015914.1 2893607 2894044 D PFAM: MerC mercury resistance protein; KEGG: cly:Celly_2226 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2893607..2894044 Cyclobacterium marinum DSM 745 11036692 YP_004774447.1 CDS Cycma_2475 NC_015914.1 2894037 2894690 D PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: cly:Celly_2227 GTP cyclohydrolase 1; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 2894037..2894690 Cyclobacterium marinum DSM 745 11036693 YP_004774448.1 CDS Cycma_2476 NC_015914.1 2895200 2895571 D PFAM: Uncharacterized protein conserved in bacteria (DUF2147); InterPro IPR019223; PFAM: Protein of unknown function DUF2147; hypothetical protein 2895200..2895571 Cyclobacterium marinum DSM 745 11036694 YP_004774449.1 CDS Cycma_2477 NC_015914.1 2895582 2896895 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: gfo:GFO_0051 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 2895582..2896895 Cyclobacterium marinum DSM 745 11036695 YP_004774450.1 CDS Cycma_2478 NC_015914.1 2896888 2898003 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sli:Slin_1840 efflux transporter RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2896888..2898003 Cyclobacterium marinum DSM 745 11036696 YP_004774451.1 CDS Cycma_2479 NC_015914.1 2898007 2899242 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Efflux ABC transporter, permease; hypothetical protein 2898007..2899242 Cyclobacterium marinum DSM 745 11036697 YP_004774452.1 CDS Cycma_2480 NC_015914.1 2899246 2899923 D PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: lby:Lbys_1426 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system ATP-binding protein LolD 1; ABC transporter 2899246..2899923 Cyclobacterium marinum DSM 745 11036698 YP_004774453.1 CDS Cycma_2481 NC_015914.1 2899920 2900807 D KEGG: lby:Lbys_2616 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2899920..2900807 Cyclobacterium marinum DSM 745 11036780 YP_004774454.1 CDS Cycma_2482 NC_015914.1 2900954 2901943 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: shg:Sph21_0874 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; signal transduction histidine kinase 2900954..2901943 Cyclobacterium marinum DSM 745 11036781 YP_004774455.1 CDS Cycma_2483 NC_015914.1 2901947 2902711 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: shg:Sph21_0873 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: two-component response regulator autolysis regulator LytR; LytTR family two component transcriptional regulator 2901947..2902711 Cyclobacterium marinum DSM 745 11036782 YP_004774456.1 CDS Cycma_2484 NC_015914.1 2902814 2903572 D KEGG: ppn:Palpr_0452 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2902814..2903572 Cyclobacterium marinum DSM 745 11036783 YP_004774457.1 CDS Cycma_2485 NC_015914.1 2903584 2903955 D hypothetical protein 2903584..2903955 Cyclobacterium marinum DSM 745 11036784 YP_004774458.1 CDS Cycma_2486 NC_015914.1 2904042 2904410 D KEGG: cpi:Cpin_5854 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2904042..2904410 Cyclobacterium marinum DSM 745 11036785 YP_004774459.1 CDS Cycma_2487 NC_015914.1 2904511 2904822 D hypothetical protein 2904511..2904822 Cyclobacterium marinum DSM 745 11036786 YP_004774460.1 CDS Cycma_2488 NC_015914.1 2904924 2905892 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: sli:Slin_3727 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Inner membrane protein YehU; signal transduction histidine kinase 2904924..2905892 Cyclobacterium marinum DSM 745 11036787 YP_004774461.1 CDS Cycma_2489 NC_015914.1 2905896 2906654 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: sli:Slin_3726 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator; LytTR family two component transcriptional regulator 2905896..2906654 Cyclobacterium marinum DSM 745 11036788 YP_004774462.1 CDS Cycma_2491 NC_015914.1 2908600 2909325 D PFAM: Demethylmenaquinone methyltransferase; COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: pol:Bpro_2296 hypothetical protein; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; SPTR: Dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 2908600..2909325 Cyclobacterium marinum DSM 745 11036790 YP_004774463.1 CDS Cycma_2492 NC_015914.1 2909329 2909463 D hypothetical protein 2909329..2909463 Cyclobacterium marinum DSM 745 11036791 YP_004774464.1 CDS Cycma_2493 NC_015914.1 2909661 2912459 D PFAM: Aconitate B N-terminal domain; Aconitase (aconitate hydratase); Aconitate hydratase 2 N-terminus; COGs: COG1049 Aconitase B; InterPro IPR015929:IPR001030; KEGG: cao:Celal_2440 aconitase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Aconitase B 2909661..2912459 Cyclobacterium marinum DSM 745 11036792 YP_004774465.1 CDS Cycma_2494 NC_015914.1 2912947 2913759 D PFAM: esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: ppn:Palpr_0042 esterase; PFAM: esterase; SPTR: Esterase; esterase 2912947..2913759 Cyclobacterium marinum DSM 745 11036793 YP_004774466.1 CDS Cycma_2495 NC_015914.1 2913792 2915690 D KEGG: heparinase II/III family protein; SPTR: uncharacterized protein; heparinase II/III family protein 2913792..2915690 Cyclobacterium marinum DSM 745 11036794 YP_004774467.1 CDS Cycma_2496 NC_015914.1 2915908 2917164 D PFAM: Protein of unknown function (DUF3500); KEGG: apt:APA01_15210 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2915908..2917164 Cyclobacterium marinum DSM 745 11036795 YP_004774468.1 CDS Cycma_2497 NC_015914.1 2917452 2918147 D KEGG: bwe:BcerKBAB4_1139 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2917452..2918147 Cyclobacterium marinum DSM 745 11036796 YP_004774469.1 CDS Cycma_2498 NC_015914.1 2918144 2919574 D PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_0450 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase enzyme; amidohydrolase 2918144..2919574 Cyclobacterium marinum DSM 745 11036797 YP_004774470.1 CDS Cycma_2500 NC_015914.1 2920682 2921677 D PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sli:Slin_4718 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase; aldo/keto reductase 2920682..2921677 Cyclobacterium marinum DSM 745 11036799 YP_004774471.1 CDS Cycma_2501 NC_015914.1 2922069 2922503 D PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_1253 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; UspA domain-containing protein 2922069..2922503 Cyclobacterium marinum DSM 745 11036800 YP_004774472.1 CDS Cycma_2502 NC_015914.1 2922632 2924029 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: mtt:Ftrac_1733 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(2922632..2924029) Cyclobacterium marinum DSM 745 11036801 YP_004774473.1 CDS Cycma_2503 NC_015914.1 2924093 2925655 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR006255:IPR000089:IPR004167:IPR001078; KEGG: mtt:Ftrac_1732 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: Dihydrolipoyllysine-residue succinyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase E2 complement(2924093..2925655) Cyclobacterium marinum DSM 745 11036802 YP_004774474.1 CDS Cycma_2504 NC_015914.1 2925743 2928535 R PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603:IPR001017:IPR005475; KEGG: chu:CHU_3362 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SPTR: Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase E1 complement(2925743..2928535) Cyclobacterium marinum DSM 745 11036803 YP_004774475.1 CDS Cycma_2505 NC_015914.1 2928654 2928833 D hypothetical protein 2928654..2928833 Cyclobacterium marinum DSM 745 11036804 YP_004774476.1 CDS Cycma_2506 NC_015914.1 2928855 2929676 R PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: cts:Ctha_1962 NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; NAD-dependent epimerase/dehydratase complement(2928855..2929676) Cyclobacterium marinum DSM 745 11036805 YP_004774477.1 CDS Cycma_2507 NC_015914.1 2929910 2930533 R PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: chu:CHU_0011 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; fatty acid hydroxylase complement(2929910..2930533) Cyclobacterium marinum DSM 745 11036806 YP_004774478.1 CDS Cycma_2508 NC_015914.1 2930682 2931824 R PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mtt:Ftrac_3311 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family; group 1 glycosyl transferase complement(2930682..2931824) Cyclobacterium marinum DSM 745 11036807 YP_004774479.1 CDS Cycma_2509 NC_015914.1 2931888 2934857 R PFAM: Glycosyl hydrolase 3 N terminal domain; Beta-lactamase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: mtt:Ftrac_3312 glycoside hydrolase 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; SPTR: Glycosyl hydrolase, family 3; glycoside hydrolase complement(2931888..2934857) Cyclobacterium marinum DSM 745 11036808 YP_004774480.1 CDS Cycma_2510 NC_015914.1 2935106 2935522 D KEGG: mtt:Ftrac_3313 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2935106..2935522 Cyclobacterium marinum DSM 745 11036809 YP_004774481.1 CDS Cycma_2511 NC_015914.1 2935515 2937368 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein mutL; InterPro IPR014763:IPR003594:IPR013507:IPR014790; KEGG: mtt:Ftrac_3314 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal; DNA mismatch repair protein mutL 2935515..2937368 Cyclobacterium marinum DSM 745 11036810 YP_004774482.1 CDS Cycma_2512 NC_015914.1 2937385 2938176 D PFAM: Rhomboid family; InterPro IPR002610; KEGG: mtt:Ftrac_3315 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein; rhomboid family protein 2937385..2938176 Cyclobacterium marinum DSM 745 11036811 YP_004774483.1 CDS Cycma_2513 NC_015914.1 2938187 2939113 D PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: mtt:Ftrac_3316 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein; rhomboid family protein 2938187..2939113 Cyclobacterium marinum DSM 745 11036812 YP_004774484.1 CDS Cycma_2514 NC_015914.1 2939129 2939743 R KEGG: regulatory protein TetR; SPTR: Regulatory protein TetR; hypothetical protein complement(2939129..2939743) Cyclobacterium marinum DSM 745 11036813 YP_004774485.1 CDS Cycma_2515 NC_015914.1 2939932 2940981 R PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383:IPR007197; KEGG: gfo:GFO_0353 radical SAM superfamily protein, UPF0063; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; ribosomal RNA large subunit methyltransferase N complement(2939932..2940981) Cyclobacterium marinum DSM 745 11036814 YP_004774486.1 CDS Cycma_2516 NC_015914.1 2941120 2942556 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2663 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase A; sulfatase complement(2941120..2942556) Cyclobacterium marinum DSM 745 11036815 YP_004774487.1 CDS Cycma_2517 NC_015914.1 2942796 2945411 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR017730:IPR004176:IPR003959:IPR 013093:IPR019489; KEGG: mtt:Ftrac_3150 ATP-dependent chaperone ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent chaperone protein ClpB; TIGRFAM: Chaperonin ClpB; ATP-dependent chaperone ClpB 2942796..2945411 Cyclobacterium marinum DSM 745 11036816 YP_004774488.1 CDS Cycma_2518 NC_015914.1 2945646 2947088 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2404 sulfatase; PFAM: Sulfatase; SPTR: Arylsulphatase A; sulfatase complement(2945646..2947088) Cyclobacterium marinum DSM 745 11036817 YP_004774489.1 CDS Cycma_2519 NC_015914.1 2947144 2947626 R PFAM: SnoaL-like polyketide cyclase; KEGG: cly:Celly_0643 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2947144..2947626) Cyclobacterium marinum DSM 745 11036818 YP_004774490.1 CDS Cycma_2520 NC_015914.1 2947791 2950385 R PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; COGs: COG0474 Cation transport ATPase; InterProIPR006408:IPR001757:IPR004014:IPR008250:IPR 005834:IPR006068; KEGG: P-type HAD superfamily ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; SPTR: Probable calcium-transporting ATPase; TIGRFAM: ATPase, P-type, calcium-transporting, PMCA-type; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; calcium-translocating P-type ATPase complement(2947791..2950385) Cyclobacterium marinum DSM 745 11036819 YP_004774491.1 CDS Cycma_2521 NC_015914.1 2950773 2951453 R PFAM: Domain of unknown function (DUF1083); KEGG: vvy:VV0542 endoxylanase precursor; SPTR: uncharacterized protein; hypothetical protein complement(2950773..2951453) Cyclobacterium marinum DSM 745 11036820 YP_004774492.1 CDS Cycma_2522 NC_015914.1 2951503 2951991 R PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance; KEGG: fjo:Fjoh_4206 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein complement(2951503..2951991) Cyclobacterium marinum DSM 745 11036821 YP_004774493.1 CDS Cycma_2523 NC_015914.1 2951996 2952985 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mtt:Ftrac_2956 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase complement(2951996..2952985) Cyclobacterium marinum DSM 745 11036822 YP_004774494.1 CDS Cycma_2524 NC_015914.1 2953092 2954288 D PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR011282:IPR004839; KEGG: mtt:Ftrac_3705 2-amino-3-ketobutyrate coenzyme a ligase; PFAM: Aminotransferase, class I/II; SPTR: Glycine C-acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate CoA ligase 2953092..2954288 Cyclobacterium marinum DSM 745 11036823 YP_004774495.1 CDS Cycma_2525 NC_015914.1 2954294 2955160 R PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: mtt:Ftrac_3720 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; hypothetical protein complement(2954294..2955160) Cyclobacterium marinum DSM 745 11036824 YP_004774496.1 CDS Cycma_2526 NC_015914.1 2955157 2956041 R PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489; KEGG: zpr:ZPR_0979 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; dihydropteroate synthase complement(2955157..2956041) Cyclobacterium marinum DSM 745 11036825 YP_004774497.1 CDS Cycma_2527 NC_015914.1 2956056 2956604 D PFAM: Domain of Unknown Function (DUF1599); InterPro IPR011630; KEGG: mtt:Ftrac_3718 hypothetical protein; PFAM: Protein of unknown function DUF1599; SPTR: uncharacterized protein; hypothetical protein 2956056..2956604 Cyclobacterium marinum DSM 745 11036826 YP_004774498.1 CDS Cycma_2528 NC_015914.1 2956594 2957700 D PFAM: DoxX; InterPro IPR011637; KEGG: mtt:Ftrac_3717 DoxX family protein; PFAM: DoxX; SPTR: Membrane protein; DoxX family protein 2956594..2957700 Cyclobacterium marinum DSM 745 11036827 YP_004774499.1 CDS Cycma_2529 NC_015914.1 2957700 2958233 D PFAM: Shikimate kinase; COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: sli:Slin_2313 shikimate kinase; PFAM: Shikimate kinase; SPTR: Shikimate kinase; shikimate kinase 2957700..2958233 Cyclobacterium marinum DSM 745 11036828 YP_004774500.1 CDS Cycma_2530 NC_015914.1 2958216 2959685 R PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); InterPro IPR005017; KEGG: psn:Pedsa_0414 membrane protein involved in aromatic hydrocarbon degradation; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: uncharacterized protein; aromatic hydrocarbon degradation membrane protein complement(2958216..2959685) Cyclobacterium marinum DSM 745 11036829 YP_004774501.1 CDS Cycma_2531 NC_015914.1 2959960 2961300 R KEGG: sli:Slin_2311 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2959960..2961300) Cyclobacterium marinum DSM 745 11036830 YP_004774502.1 CDS Cycma_2532 NC_015914.1 2961433 2962914 D PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I; COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; InterPro IPR004499:IPR002314:IPR004154:IPR016061; KEGG: dfe:Dfer_0217 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II, C-terminal; Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; prolyl-tRNA synthetase 2961433..2962914 Cyclobacterium marinum DSM 745 11036831 YP_004774503.1 CDS Cycma_2533 NC_015914.1 2963255 2963716 D PFAM: NfeD-like; InterPro IPR002810; KEGG: mtt:Ftrac_3712 hypothetical protein; PFAM: Nodulation efficiency, NfeD; SPTR: Nodulation efficiency protein D (NfeD); hypothetical protein 2963255..2963716 Cyclobacterium marinum DSM 745 11036832 YP_004774504.1 CDS Cycma_2534 NC_015914.1 2963720 2964733 D PFAM: SigmaW regulon antibacterial; COGs: COG4864 conserved hypothetical protein; HAMAP: UPF0365 protein; KEGG: mtt:Ftrac_3711 hypothetical protein; SPTR: UPF0365 protein ALPR1_16009; hypothetical protein 2963720..2964733 Cyclobacterium marinum DSM 745 11036833 YP_004774505.1 CDS Cycma_2535 NC_015914.1 2964745 2966328 R InterPro IPR011647; KEGG: amr:AM1_0592 lipoprotein; PFAM: KWG Leptospira; SPTR: uncharacterized protein; KWG repeat-containing protein complement(2964745..2966328) Cyclobacterium marinum DSM 745 11036834 YP_004774506.1 CDS Cycma_2536 NC_015914.1 2966441 2967724 R PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343:IPR015895:IPR006151:IPR015896; KEGG: mtt:Ftrac_2957 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(2966441..2967724) Cyclobacterium marinum DSM 745 11036835 YP_004774507.1 CDS Cycma_2537 NC_015914.1 2967908 2968618 D KEGG: aas:Aasi_0664 hypothetical protein; SPTR: ComEA protein-related protein; hypothetical protein 2967908..2968618 Cyclobacterium marinum DSM 745 11036836 YP_004774508.1 CDS Cycma_2538 NC_015914.1 2968640 2969155 D KEGG: fjo:Fjoh_2919 hypothetical protein; SPTR: Type I restriction enzyme R protein; hypothetical protein 2968640..2969155 Cyclobacterium marinum DSM 745 11036837 YP_004774509.1 CDS Cycma_2539 NC_015914.1 2969173 2969961 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: mtt:Ftrac_2840 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; SPTR: Transcriptional regulator; Crp/Fnr family transcriptional regulator 2969173..2969961 Cyclobacterium marinum DSM 745 11036838 YP_004774510.1 CDS Cycma_2540 NC_015914.1 2970006 2970695 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_11601 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein complement(2970006..2970695) Cyclobacterium marinum DSM 745 11036839 YP_004774511.1 CDS Cycma_2541 NC_015914.1 2970790 2971506 R KEGG: cao:Celal_3094 tat (twin-arginine translocation) pathway signal sequence domain protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; tat (twin-arginine translocation) pathway signal sequence domain-containing protein complement(2970790..2971506) Cyclobacterium marinum DSM 745 11036840 YP_004774512.1 CDS Cycma_2542 NC_015914.1 2971512 2973251 R PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR002938; KEGG: zpr:ZPR_3190 oxidoreductase, GMC family protein; PFAM: Monooxygenase, FAD-binding; SPTR: GMC oxidoreductase; monooxygenase FAD-binding protein complement(2971512..2973251) Cyclobacterium marinum DSM 745 11036841 YP_004774513.1 CDS Cycma_2543 NC_015914.1 2973357 2974046 R PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; SPTR: Arylesterase; G-D-S-L family lipolytic protein complement(2973357..2974046) Cyclobacterium marinum DSM 745 11036842 YP_004774514.1 CDS Cycma_2544 NC_015914.1 2974097 2974816 D PFAM: ABC transporter; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2284 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter 2974097..2974816 Cyclobacterium marinum DSM 745 11036843 YP_004774515.1 CDS Cycma_2545 NC_015914.1 2974809 2977328 D PFAM: Predicted permease; COGs: COG3127 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component; InterPro IPR003838; KEGG: sli:Slin_6498 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: permease domain protein; hypothetical protein 2974809..2977328 Cyclobacterium marinum DSM 745 11036844 YP_004774516.1 CDS Cycma_2546 NC_015914.1 2977413 2977862 D PFAM: MarR family; InterPro IPR000835; KEGG: mtt:Ftrac_0208 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator; regulatory protein MarR 2977413..2977862 Cyclobacterium marinum DSM 745 11036845 YP_004774517.1 CDS Cycma_2547 NC_015914.1 2978088 2978798 D PFAM: Protein of unknown function (DUF541); COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: uncharacterized protein; hypothetical protein 2978088..2978798 Cyclobacterium marinum DSM 745 11036846 YP_004774518.1 CDS Cycma_2548 NC_015914.1 2978802 2979173 R KEGG: fbc:FB2170_04025 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2978802..2979173) Cyclobacterium marinum DSM 745 11036847 YP_004774519.1 CDS Cycma_2549 NC_015914.1 2979462 2980145 D PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: cpi:Cpin_0539 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; hypothetical protein 2979462..2980145 Cyclobacterium marinum DSM 745 11036848 YP_004774520.1 CDS Cycma_2550 NC_015914.1 2980142 2980957 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150:IPR006379:IPR013200; KEGG: mtt:Ftrac_1660 cof-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Cof protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase complement(2980142..2980957) Cyclobacterium marinum DSM 745 11036849 YP_004774521.1 CDS Cycma_2551 NC_015914.1 2980988 2982325 R PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR004558:IPR007197:IPR010723; KEGG: wvi:Weevi_1359 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; oxygen-independent coproporphyrinogen III oxidase complement(2980988..2982325) Cyclobacterium marinum DSM 745 11036850 YP_004774522.1 CDS Cycma_2552 NC_015914.1 2982448 2983569 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR008141:IPR007886:IPR007698; KEGG: mtt:Ftrac_3618 L-alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; SPTR: Alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; alanine dehydrogenase complement(2982448..2983569) Cyclobacterium marinum DSM 745 11036851 YP_004774523.1 CDS Cycma_2553 NC_015914.1 2983921 2986341 D PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: mtt:Ftrac_3619 transketolase domain-containing protein; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SPTR: Transketolase; transketolase domain-containing protein 2983921..2986341 Cyclobacterium marinum DSM 745 11036852 YP_004774524.1 CDS Cycma_2554 NC_015914.1 2986464 2987135 R KEGG: mtt:Ftrac_0976 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2986464..2987135) Cyclobacterium marinum DSM 745 11036853 YP_004774525.1 CDS Cycma_2555 NC_015914.1 2987213 2988208 D PFAM: Acyl-protein synthetase, LuxE; KEGG: mtt:Ftrac_0975 acyl-protein synthetase, LuxE; SPTR: uncharacterized protein; acyl-protein synthetase LuxE 2987213..2988208 Cyclobacterium marinum DSM 745 11036854 YP_004774526.1 CDS Cycma_2556 NC_015914.1 2988262 2988378 D hypothetical protein 2988262..2988378 Cyclobacterium marinum DSM 745 11036855 YP_004774527.1 CDS Cycma_2557 NC_015914.1 2988394 2989551 R PFAM: Response regulator receiver domain; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078; KEGG: mtt:Ftrac_0050 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Sigma-54 dependent DNA-binding response regulator CrdA; two component, sigma-54 specific, transcriptional regulator complement(2988394..2989551) Cyclobacterium marinum DSM 745 11036856 YP_004774528.1 CDS Cycma_2558 NC_015914.1 2990557 2991126 D PFAM: Protein of unknown function (DUF3109); KEGG: mtt:Ftrac_0122 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 2990557..2991126 Cyclobacterium marinum DSM 745 11036858 YP_004774529.1 CDS Cycma_2559 NC_015914.1 2991320 2992627 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: mtt:Ftrac_0570 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine1- carboxyvinyltransferase complement(2991320..2992627) Cyclobacterium marinum DSM 745 11036859 YP_004774530.1 CDS Cycma_2560 NC_015914.1 2992627 2993301 R KEGG: mtt:Ftrac_0569 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(2992627..2993301) Cyclobacterium marinum DSM 745 11036860 YP_004774531.1 CDS Cycma_2561 NC_015914.1 2993397 2995643 R PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: mtt:Ftrac_0837 UvrD/rep helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase PcrA; UvrD/REP helicase complement(2993397..2995643) Cyclobacterium marinum DSM 745 11037590 YP_004774532.1 CDS Cycma_2562 NC_015914.1 2995849 2996790 R PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: ran:Riean_0349 lipid a biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lauroyl/myristoyl acyltransferase; lipid A biosynthesis acyltransferase complement(2995849..2996790) Cyclobacterium marinum DSM 745 11037591 YP_004774533.1 CDS Cycma_2563 NC_015914.1 2996809 2997399 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_5546 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor RpoE1; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2996809..2997399 Cyclobacterium marinum DSM 745 11037592 YP_004774534.1 CDS Cycma_2564 NC_015914.1 2997423 2997695 D TIGRFAM: mycothiol system anti-sigma-R factor; anti-sigma factor, TIGR02949 family; KEGG: sli:Slin_5547 hypothetical protein; SPTR: anti-sigma factor; hypothetical protein 2997423..2997695 Cyclobacterium marinum DSM 745 11037593 YP_004774535.1 CDS Cycma_2565 NC_015914.1 2997701 2998273 D PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR017665:IPR008145:IPR008144; KEGG: sli:Slin_5548 guanylate kinase; PFAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; guanylate kinase 2997701..2998273 Cyclobacterium marinum DSM 745 11037594 YP_004774536.1 CDS Cycma_2566 NC_015914.1 2998279 2998845 D PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: nicotinate-nucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820; KEGG: mtt:Ftrac_1821 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: Cytidylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; nicotinate-nucleotide adenylyltransferase 2998279..2998845 Cyclobacterium marinum DSM 745 11037595 YP_004774537.1 CDS Cycma_2567 NC_015914.1 2999060 3000415 R KEGG: fbc:FB2170_08129 phosphoesterase, PA-phosphatase related protein; SPTR: phosphoesterase, PA-phosphatase related protein; phosphoesterase, PA-phosphatase-like protein complement(2999060..3000415) Cyclobacterium marinum DSM 745 11037596 YP_004774538.1 CDS Cycma_2568 NC_015914.1 3000451 3001809 R PFAM: PAP2 superfamily; KEGG: dfe:Dfer_4739 vanadium-dependent haloperoxidase; SPTR: Vanadium-dependent haloperoxidase; vanadium-dependent haloperoxidase complement(3000451..3001809) Cyclobacterium marinum DSM 745 11037597 YP_004774539.1 CDS Cycma_2569 NC_015914.1 3001814 3005146 R PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR011519:IPR013517; KEGG: dfe:Dfer_4738 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein complement(3001814..3005146) Cyclobacterium marinum DSM 745 11037598 YP_004774540.1 CDS Cycma_2570 NC_015914.1 3005393 3007252 R PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein complement(3005393..3007252) Cyclobacterium marinum DSM 745 11037599 YP_004774541.1 CDS Cycma_2571 NC_015914.1 3007273 3010449 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein; TonB-dependent receptor plug complement(3007273..3010449) Cyclobacterium marinum DSM 745 11037600 YP_004774542.1 CDS Cycma_2572 NC_015914.1 3011337 3011897 R PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR015998:IPR002661; KEGG: mtt:Ftrac_3015 ribosome recycling factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; ribosome-recycling factor complement(3011337..3011897) Cyclobacterium marinum DSM 745 11037601 YP_004774543.1 CDS Cycma_2573 NC_015914.1 3011906 3012616 R PFAM: Amino acid kinase; TIGRFAM: uridylate kinase; COGs: COG0528 Uridylate kinase; InterPro IPR015963:IPR001048; KEGG: mtt:Ftrac_3016 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: UMP kinase; TIGRFAM: Uridylate kinase, bacteria; uridylate kinase complement(3011906..3012616) Cyclobacterium marinum DSM 745 11037602 YP_004774544.1 CDS Cycma_2574 NC_015914.1 3013268 3015886 D PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: dfe:Dfer_4878 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 3013268..3015886 Cyclobacterium marinum DSM 745 11037603 YP_004774545.1 CDS Cycma_2575 NC_015914.1 3016515 3017702 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: mtt:Ftrac_3018 translation elongation factor 1a (ef-1a/ef-tu); PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; translation elongation factor Tu 3016515..3017702 Cyclobacterium marinum DSM 745 11037607 YP_004774546.1 CDS Cycma_2576 NC_015914.1 3018013 3018201 D PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; InterPro IPR005807:IPR001901; KEGG: aas:Aasi_1402 hypothetical protein; PFAM: Protein secE/sec61-gamma protein; SPTR: Preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; preprotein translocase subunit SecE 3018013..3018201 Cyclobacterium marinum DSM 745 11037609 YP_004774547.1 CDS Cycma_2577 NC_015914.1 3018219 3018776 D PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR005824:IPR001062; KEGG: mtt:Ftrac_3020 transcription antitermination protein NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG; NusG antitermination factor 3018219..3018776 Cyclobacterium marinum DSM 745 11037610 YP_004774548.1 CDS Cycma_2578 NC_015914.1 3018780 3019223 D PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; COGs: COG0080 Ribosomal protein L11; InterPro IPR000911:IPR006519:IPR020784:IPR020783; KEGG: dfe:Dfer_3453 50S ribosomal protein L11; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; 50S ribosomal protein L11 3018780..3019223 Cyclobacterium marinum DSM 745 11037611 YP_004774549.1 CDS Cycma_2579 NC_015914.1 3019234 3019932 D PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: mtt:Ftrac_3022 LSU ribosomal protein l1p; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; 50S ribosomal protein L1 3019234..3019932 Cyclobacterium marinum DSM 745 11037612 YP_004774550.1 CDS Cycma_2580 NC_015914.1 3019936 3020478 D PFAM: Ribosomal protein L10; COGs: COG0244 Ribosomal protein L10; HAMAP: 50S ribosomal protein L10; InterPro IPR001790; KEGG: dfe:Dfer_3451 ribosomal protein L10; PFAM: Ribosomal protein L10; SPTR: 50S ribosomal protein L10; 50S ribosomal protein L10 3019936..3020478 Cyclobacterium marinum DSM 745 11037613 YP_004774551.1 CDS Cycma_2581 NC_015914.1 3020528 3020908 D PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: fbc:FB2170_16186 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 3020528..3020908 Cyclobacterium marinum DSM 745 11037614 YP_004774552.1 CDS Cycma_2582 NC_015914.1 3021066 3024941 D PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: mtt:Ftrac_3025 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; DNA-directed RNA polymerase subunit beta 3021066..3024941 Cyclobacterium marinum DSM 745 11037615 YP_004774553.1 CDS Cycma_2583 NC_015914.1 3024990 3029300 D PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta'; InterProIPR006592:IPR012754:IPR007080:IPR000722:IPR 007066:IPR007083:IPR007081; KEGG: chu:CHU_3168 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; DNA-directed RNA polymerase subunit beta' 3024990..3029300 Cyclobacterium marinum DSM 745 11037616 YP_004774554.1 CDS Cycma_2584 NC_015914.1 3029371 3029700 D PFAM: Protein of unknown function (DUF3467); KEGG: mtt:Ftrac_3027 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3029371..3029700 Cyclobacterium marinum DSM 745 11037617 YP_004774555.1 CDS Cycma_2585 NC_015914.1 3029851 3030234 D PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; COGs: COG0048 Ribosomal protein S12; InterPro IPR005679:IPR006032; KEGG: lby:Lbys_1936 ssu ribosomal protein s12p; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; 30S ribosomal protein S12 3029851..3030234 Cyclobacterium marinum DSM 745 11037618 YP_004774556.1 CDS Cycma_2586 NC_015914.1 3030257 3030724 D PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; COGs: COG0049 Ribosomal protein S7; InterPro IPR005717:IPR000235; KEGG: mtt:Ftrac_3029 SSU ribosomal protein s7p; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; 30S ribosomal protein S7 3030257..3030724 Cyclobacterium marinum DSM 745 11037619 YP_004774557.1 CDS Cycma_2587 NC_015914.1 3030731 3032878 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640; KEGG: aas:Aasi_0125 elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; translation elongation factor G 3030731..3032878 Cyclobacterium marinum DSM 745 11037620 YP_004774558.1 CDS Cycma_2588 NC_015914.1 3032890 3033195 D PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; COGs: COG0051 Ribosomal protein S10; HAMAP: 30S ribosomal protein S10; InterPro IPR005731:IPR001848; KEGG: mtt:Ftrac_3031 SSU ribosomal protein s10p; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10, bacterial; 30S ribosomal protein S10 3032890..3033195 Cyclobacterium marinum DSM 745 11037621 YP_004774559.1 CDS Cycma_2589 NC_015914.1 3033377 3034075 D PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; COGs: COG0087 Ribosomal protein L3; InterPro IPR019927:IPR000597; KEGG: sli:Slin_5787 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; 50S ribosomal protein L3 3033377..3034075 Cyclobacterium marinum DSM 745 11037622 YP_004774560.1 CDS Cycma_2590 NC_015914.1 3034080 3034709 D PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: psn:Pedsa_2147 LSU ribosomal protein L4P; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; 50S ribosomal protein L4 3034080..3034709 Cyclobacterium marinum DSM 745 11037623 YP_004774561.1 CDS Cycma_2591 NC_015914.1 3034714 3035001 D PFAM: Ribosomal protein L23; COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: chu:CHU_3160 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; 50S ribosomal protein L25 3034714..3035001 Cyclobacterium marinum DSM 745 11037624 YP_004774562.1 CDS Cycma_2592 NC_015914.1 3035015 3035839 D PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; COGs: COG0090 Ribosomal protein L2; InterPro IPR005880:IPR002171; KEGG: lby:Lbys_1827 lsu ribosomal protein l2p; PFAM: Ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; 50S ribosomal protein L2 3035015..3035839 Cyclobacterium marinum DSM 745 11037625 YP_004774563.1 CDS Cycma_2593 NC_015914.1 3035842 3036120 D PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: mtt:Ftrac_3036 SSU ribosomal protein s19p; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; 30S ribosomal protein S19 3035842..3036120 Cyclobacterium marinum DSM 745 11037626 YP_004774564.1 CDS Cycma_2594 NC_015914.1 3036123 3036512 D PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR001063; KEGG: mtt:Ftrac_3037 LSU ribosomal protein l22p; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; 50S ribosomal protein L22 3036123..3036512 Cyclobacterium marinum DSM 745 11037627 YP_004774565.1 CDS Cycma_2595 NC_015914.1 3036516 3037253 D PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; COGs: COG0092 Ribosomal protein S3; InterProIPR004087:IPR005704:IPR008282:IPR004044:IPR 001351; KEGG: chu:CHU_3156 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; 30S ribosomal protein S3 3036516..3037253 Cyclobacterium marinum DSM 745 11037628 YP_004774566.1 CDS Cycma_2596 NC_015914.1 3037274 3037696 D PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114:IPR016180; KEGG: mtt:Ftrac_3039 LSU ribosomal protein l16p; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; 50S ribosomal protein L16 3037274..3037696 Cyclobacterium marinum DSM 745 11037629 YP_004774567.1 CDS Cycma_2597 NC_015914.1 3037701 3037895 D PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR001854; KEGG: chu:CHU_3154 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: Ribosomal protein L29; 50S ribosomal protein L29 3037701..3037895 Cyclobacterium marinum DSM 745 11037630 YP_004774568.1 CDS Cycma_2598 NC_015914.1 3037904 3038167 D PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; COGs: COG0186 Ribosomal protein S17; InterPro IPR019984:IPR000266; KEGG: mtt:Ftrac_3041 SSU ribosomal protein s17p; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; 30S ribosomal protein S17 3037904..3038167 Cyclobacterium marinum DSM 745 11037631 YP_004774569.1 CDS Cycma_2599 NC_015914.1 3038171 3038539 D PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR000218; KEGG: dfe:Dfer_4353 ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; 50S ribosomal protein L14 3038171..3038539 Cyclobacterium marinum DSM 745 11037632 YP_004774570.1 CDS Cycma_2600 NC_015914.1 3038542 3038886 D PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; COGs: COG0198 Ribosomal protein L24; InterPro IPR005824:IPR003256; KEGG: chu:CHU_3151 50S ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; 50S ribosomal protein L24 3038542..3038886 Cyclobacterium marinum DSM 745 11037633 YP_004774571.1 CDS Cycma_2601 NC_015914.1 3038879 3039439 D PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: mtt:Ftrac_3044 LSU ribosomal protein l5p; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; 50S ribosomal protein L5 3038879..3039439 Cyclobacterium marinum DSM 745 11037634 YP_004774572.1 CDS Cycma_2602 NC_015914.1 3039442 3039711 D PFAM: Ribosomal protein S14p/S29e; COGs: COG0199 Ribosomal protein S14; HAMAP: 30S ribosomal protein S14; InterPro IPR001209; KEGG: mtt:Ftrac_3045 SSU ribosomal protein s14p; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14; 30S ribosomal protein S14 3039442..3039711 Cyclobacterium marinum DSM 745 11037635 YP_004774573.1 CDS Cycma_2603 NC_015914.1 3039795 3040190 D PFAM: Ribosomal protein S8; COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: lby:Lbys_1816 ssu ribosomal protein s8p; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; 30S ribosomal protein S8 3039795..3040190 Cyclobacterium marinum DSM 745 11037636 YP_004774574.1 CDS Cycma_2604 NC_015914.1 3040200 3040757 D PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906:IPR020040; KEGG: dfe:Dfer_4358 ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; 50S ribosomal protein L6 3040200..3040757 Cyclobacterium marinum DSM 745 11037637 YP_004774575.1 CDS Cycma_2605 NC_015914.1 3040765 3041115 D PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: chu:CHU_3146 50S ribosomal protein L18P; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; 50S ribosomal protein L18 3040765..3041115 Cyclobacterium marinum DSM 745 11037638 YP_004774576.1 CDS Cycma_2606 NC_015914.1 3041121 3041639 D PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; COGs: COG0098 Ribosomal protein S5; InterPro IPR005712:IPR013810:IPR005324; KEGG: mtt:Ftrac_3049 SSU ribosomal protein s5p; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; 30S ribosomal protein S5 3041121..3041639 Cyclobacterium marinum DSM 745 11037639 YP_004774577.1 CDS Cycma_2607 NC_015914.1 3041644 3041823 D PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517; KEGG: dfe:Dfer_4361 ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e, conserved region; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; 50S ribosomal protein L30 3041644..3041823 Cyclobacterium marinum DSM 745 11037640 YP_004774578.1 CDS Cycma_2608 NC_015914.1 3041879 3042325 D PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; COGs: COG0200 Ribosomal protein L15; InterPro IPR005749:IPR001196; KEGG: mtt:Ftrac_3051 LSU ribosomal protein l15p; PFAM: Ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; 50S ribosomal protein L15 3041879..3042325 Cyclobacterium marinum DSM 745 11037641 YP_004774579.1 CDS Cycma_2609 NC_015914.1 3042329 3043645 D PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: mtt:Ftrac_3052 protein translocase subunit SecY/sec61 alpha; PFAM: SecY protein; SPTR: Preprotein translocase, SecY subunit; TIGRFAM: SecY protein; preprotein translocase subunit SecY 3042329..3043645 Cyclobacterium marinum DSM 745 11037642 YP_004774580.1 CDS Cycma_2610 NC_015914.1 3043648 3044421 D PFAM: Metallopeptidase M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467:IPR000994; KEGG: chu:CHU_3141 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase 3043648..3044421 Cyclobacterium marinum DSM 745 11037643 YP_004774581.1 CDS Cycma_2611 NC_015914.1 3044424 3044642 D PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR004368:IPR006196; KEGG: mtt:Ftrac_3053 bacterial translation initiation factor 1 (bif-1); PFAM: S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; translation initiation factor IF-1 3044424..3044642 Cyclobacterium marinum DSM 745 11037644 YP_004774582.1 CDS Cycma_2612 NC_015914.1 3044689 3044805 D PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: phe:Phep_0625 50S ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; manually curated; 50S ribosomal protein L36 3044689..3044805 Cyclobacterium marinum DSM 745 11037645 YP_004774583.1 CDS Cycma_2613 NC_015914.1 3044811 3045188 D PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; COGs: COG0099 Ribosomal protein S13; InterPro IPR019980:IPR001892; KEGG: lby:Lbys_1806 ssu ribosomal protein s13p; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; 30S ribosomal protein S13 3044811..3045188 Cyclobacterium marinum DSM 745 11037646 YP_004774584.1 CDS Cycma_2614 NC_015914.1 3045204 3045602 D PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; COGs: COG0100 Ribosomal protein S11; InterPro IPR019981:IPR001971; KEGG: mtt:Ftrac_3056 SSU ribosomal protein s11p; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; 30S ribosomal protein S11 3045204..3045602 Cyclobacterium marinum DSM 745 11037647 YP_004774585.1 CDS Cycma_2615 NC_015914.1 3045620 3046225 D PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942:IPR005709:IPR001912; KEGG: mtt:Ftrac_3057 SSU ribosomal protein s4p; PFAM: Ribosomal protein S4; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; 30S ribosomal protein S4 3045620..3046225 Cyclobacterium marinum DSM 745 11037648 YP_004774586.1 CDS Cycma_2616 NC_015914.1 3046258 3047247 D PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773:IPR011263:IPR011261:IPR011262:IPR 011260; KEGG: mtt:Ftrac_3058 DNA-directed RNA polymerase subunit alpha; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; DNA-directed RNA polymerase subunit alpha 3046258..3047247 Cyclobacterium marinum DSM 745 11037649 YP_004774587.1 CDS Cycma_2617 NC_015914.1 3047254 3047814 D PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG0203 Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; InterPro IPR000456; KEGG: mtt:Ftrac_3059 LSU ribosomal protein l17p; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; 50S ribosomal protein L17 3047254..3047814 Cyclobacterium marinum DSM 745 11037650 YP_004774588.1 CDS Cycma_2618 NC_015914.1 3047948 3049039 D PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: chu:CHU_3134 carbamoyl phosphate synthase small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl phosphate synthase, small subunit, N-terminal; SPTR: Carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 3047948..3049039 Cyclobacterium marinum DSM 745 11037651 YP_004774589.1 CDS Cycma_2619 NC_015914.1 3049061 3050338 D PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: lby:Lbys_0613 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; SPTR: Enolase; TIGRFAM: Enolase; enolase 3049061..3050338 Cyclobacterium marinum DSM 745 11037652 YP_004774590.1 CDS Cycma_2620 NC_015914.1 3050654 3050941 D PFAM: Septum formation initiator; KEGG: mtt:Ftrac_3062 hypothetical protein; SPTR: septum formation initiator-related protein; hypothetical protein 3050654..3050941 Cyclobacterium marinum DSM 745 11037653 YP_004774591.1 CDS Cycma_2621 NC_015914.1 3050922 3051491 D KEGG: mtt:Ftrac_3063 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3050922..3051491 Cyclobacterium marinum DSM 745 11037654 YP_004774592.1 CDS Cycma_2622 NC_015914.1 3051507 3052343 D TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: lby:Lbys_0477 serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; serine O-acetyltransferase 3051507..3052343 Cyclobacterium marinum DSM 745 11037655 YP_004774593.1 CDS Cycma_2623 NC_015914.1 3052355 3053233 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; COGs: COG0031 Cysteine synthase; InterPro IPR005858:IPR005856:IPR001926; KEGG: mtt:Ftrac_0041 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; cysteine synthase 3052355..3053233 Cyclobacterium marinum DSM 745 11037656 YP_004774594.1 CDS Cycma_2624 NC_015914.1 3053436 3054653 D hypothetical protein 3053436..3054653 Cyclobacterium marinum DSM 745 11037657 YP_004774595.1 CDS Cycma_2625 NC_015914.1 3054722 3055912 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: sli:Slin_6603 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Ser/Thr protein phosphatase; metallophosphoesterase complement(3054722..3055912) Cyclobacterium marinum DSM 745 11037658 YP_004774596.1 CDS Cycma_2626 NC_015914.1 3056351 3057382 D InterPro IPR006311:IPR012307; KEGG: fbc:FB2170_03970 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Tat (Twin-arginine translocation) pathway signal sequence containing protein; xylose isomerase domain-containing protein 3056351..3057382 Cyclobacterium marinum DSM 745 11037659 YP_004774597.1 CDS Cycma_2627 NC_015914.1 3057475 3057849 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mtt:Ftrac_3075 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein; glyoxalase/bleomycin resistance protein/dioxygenase 3057475..3057849 Cyclobacterium marinum DSM 745 11037660 YP_004774598.1 CDS Cycma_2628 NC_015914.1 3057871 3058830 R PFAM: HTH domain; COGs: COG2378 transcriptional regulator protein; InterPro IPR013196; KEGG: fjo:Fjoh_0788 helix-turn-helix, type 11 domain-containing protein; SPTR: transcriptional regulator; helix-turn-helix, type 11 domain-containing protein complement(3057871..3058830) Cyclobacterium marinum DSM 745 11037661 YP_004774599.1 CDS Cycma_2629 NC_015914.1 3058855 3059466 D PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: fjo:Fjoh_0790 DinB family protein; PFAM: DinB; SPTR: DinB family protein; DinB family protein 3058855..3059466 Cyclobacterium marinum DSM 745 11037662 YP_004774600.1 CDS Cycma_2630 NC_015914.1 3059686 3061407 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase; InterPro IPR002313:IPR004365:IPR004364; KEGG: phe:Phep_1559 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; lysyl-tRNA synthetase complement(3059686..3061407) Cyclobacterium marinum DSM 745 11037663 YP_004774601.1 CDS Cycma_2631 NC_015914.1 3061421 3062611 R PFAM: Proline dehydrogenase; InterPro IPR002872; KEGG: mtt:Ftrac_1256 proline dehydrogenase; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; proline dehydrogenase complement(3061421..3062611) Cyclobacterium marinum DSM 745 11037664 YP_004774602.1 CDS Cycma_2632 NC_015914.1 3062828 3063892 D PFAM: Inosine-uridine preferring nucleoside hydrolase; KEGG: dfe:Dfer_1840 inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3062828..3063892 Cyclobacterium marinum DSM 745 11037665 YP_004774603.1 CDS Cycma_2633 NC_015914.1 3063889 3065247 D SPTR: uncharacterized protein; hypothetical protein 3063889..3065247 Cyclobacterium marinum DSM 745 11037666 YP_004774604.1 CDS Cycma_2634 NC_015914.1 3065658 3066764 D PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR020822; KEGG: mtt:Ftrac_1264 3-deoxy-7-phosphoheptulonate synthase; PFAM: Chorismate mutase, type II; DAHP synthetase I/KDSA; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; chorismate mutase 3065658..3066764 Cyclobacterium marinum DSM 745 11037667 YP_004774605.1 CDS Cycma_2635 NC_015914.1 3066994 3068031 D PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase; InterPro IPR002658; KEGG: dfe:Dfer_3640 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; SPTR: 3-dehydroquinate synthase; 3-dehydroquinate synthase 3066994..3068031 Cyclobacterium marinum DSM 745 11037668 YP_004774606.1 CDS Cycma_2636 NC_015914.1 3068091 3069320 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; InterPro IPR006264:IPR001986; KEGG: sli:Slin_2931 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 3068091..3069320 Cyclobacterium marinum DSM 745 11037669 YP_004774607.1 CDS Cycma_2637 NC_015914.1 3069433 3070248 D PFAM: Prephenate dehydratase; ACT domain; COGs: COG0077 Prephenate dehydratase; InterPro IPR001086:IPR002912; KEGG: Prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; SPTR: Prephenate dehydratase; prephenate dehydratase 3069433..3070248 Cyclobacterium marinum DSM 745 11037670 YP_004774608.1 CDS Cycma_2638 NC_015914.1 3070248 3071399 D PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fjo:Fjoh_0516 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, classes I and II; class I and II aminotransferase 3070248..3071399 Cyclobacterium marinum DSM 745 11037671 YP_004774609.1 CDS Cycma_2639 NC_015914.1 3071405 3072253 D PFAM: Prephenate dehydrogenase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: zpr:ZPR_3525 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; prephenate dehydrogenase 3071405..3072253 Cyclobacterium marinum DSM 745 11037672 YP_004774610.1 CDS Cycma_2640 NC_015914.1 3072311 3073525 D PFAM: Amidinotransferase; COGs: COG2235 Arginine deiminase; InterPro IPR003198; KEGG: ttm:Tthe_0085 arginine deiminase; PFAM: Amidinotransferase; SPTR: Arginine deiminase; amidinotransferase 3072311..3073525 Cyclobacterium marinum DSM 745 11037673 YP_004774611.1 CDS Cycma_2641 NC_015914.1 3073551 3076283 R KEGG: mtt:Ftrac_0086 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3073551..3076283) Cyclobacterium marinum DSM 745 11037674 YP_004774612.1 CDS Cycma_2642 NC_015914.1 3076383 3077183 D PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: mtt:Ftrac_0087 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 3076383..3077183 Cyclobacterium marinum DSM 745 11037675 YP_004774613.1 CDS Cycma_2643 NC_015914.1 3077122 3077262 D hypothetical protein 3077122..3077262 Cyclobacterium marinum DSM 745 11037676 YP_004774614.1 CDS Cycma_2644 NC_015914.1 3077297 3078145 D COGs: COG2912 conserved hypothetical protein; KEGG: mtt:Ftrac_0090 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3077297..3078145 Cyclobacterium marinum DSM 745 11037677 YP_004774615.1 CDS Cycma_2645 NC_015914.1 3078142 3078723 R PFAM: AhpC/TSA family; KEGG: chu:CHU_0757 thiol-disulfide isomerase/thioredoxin; SPTR: antioxidant, AhpC/TSA family; hypothetical protein complement(3078142..3078723) Cyclobacterium marinum DSM 745 11037678 YP_004774616.1 CDS Cycma_2646 NC_015914.1 3078756 3079385 R PFAM: 4'-phosphopantetheinyl transferase superfamily; COGs: COG2091 Phosphopantetheinyl transferase; KEGG: dfe:Dfer_2892 4'-phosphopantetheinyl transferase; SPTR: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(3078756..3079385) Cyclobacterium marinum DSM 745 11037679 YP_004774617.1 CDS Cycma_2647 NC_015914.1 3079429 3080343 D PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR019781; KEGG: chu:CHU_0759 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD domain-containing protein; hypothetical protein 3079429..3080343 Cyclobacterium marinum DSM 745 11037680 YP_004774618.1 CDS Cycma_2648 NC_015914.1 3080377 3081219 D PFAM: DivIVA protein; TIGRFAM: DivIVA domain; InterPro IPR019933:IPR007793; KEGG: mtt:Ftrac_0093 diviva domain; PFAM: DivIVA; SPTR: DivIVA domain; TIGRFAM: DivIVA domain; DivIVA domain-containing protein 3080377..3081219 Cyclobacterium marinum DSM 745 11037681 YP_004774619.1 CDS Cycma_2649 NC_015914.1 3081219 3081584 D PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157:IPR006156; KEGG: dfe:Dfer_2889 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; SPTR: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; dihydroneopterin aldolase 3081219..3081584 Cyclobacterium marinum DSM 745 11037682 YP_004774620.1 CDS Cycma_2650 NC_015914.1 3081598 3082059 D KEGG: shg:Sph21_0210 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3081598..3082059 Cyclobacterium marinum DSM 745 11037683 YP_004774621.1 CDS Cycma_2651 NC_015914.1 3082098 3082415 R PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092:IPR000361; KEGG: rmr:Rmar_1342 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: HesB/YadR/YfhF family protein; TIGRFAM: FeS cluster insertion; iron-sulfur cluster assembly accessory protein complement(3082098..3082415) Cyclobacterium marinum DSM 745 11037684 YP_004774622.1 CDS Cycma_2652 NC_015914.1 3082528 3083049 D KEGG: mtt:Ftrac_0993 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3082528..3083049 Cyclobacterium marinum DSM 745 11037685 YP_004774623.1 CDS Cycma_2653 NC_015914.1 3083076 3083492 D PFAM: Protein of unknown function (DUF1232); InterPro IPR010652; KEGG: cpb:Cphamn1_2537 hypothetical protein; PFAM: Protein of unknown function DUF1232; SPTR: uncharacterized protein; hypothetical protein 3083076..3083492 Cyclobacterium marinum DSM 745 11037686 YP_004774624.1 CDS Cycma_2654 NC_015914.1 3083489 3084211 D KEGG: lic:LIC11344 hypothetical protein; SPTR: NAD dependent epimerase/dehydratase; hypothetical protein 3083489..3084211 Cyclobacterium marinum DSM 745 11037687 YP_004774625.1 CDS Cycma_2655 NC_015914.1 3084208 3084660 D PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: bfr:BF0097 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 3084208..3084660 Cyclobacterium marinum DSM 745 11037688 YP_004774626.1 CDS Cycma_2656 NC_015914.1 3084689 3086251 D PFAM: ABC transporter; COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003593:IPR003439; KEGG: cpi:Cpin_0162 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: molybdenum transport ATP-binding protein; ABC transporter 3084689..3086251 Cyclobacterium marinum DSM 745 11037689 YP_004774627.1 CDS Cycma_2657 NC_015914.1 3086258 3086587 D PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: mtt:Ftrac_1026 MazG nucleotide pyrophosphohydrolase; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase; nucleotide pyrophosphohydrolase 3086258..3086587 Cyclobacterium marinum DSM 745 11037690 YP_004774628.1 CDS Cycma_2658 NC_015914.1 3086620 3087414 R PFAM: MOSC N-terminal beta barrel domain; MOSC domain; COGs: COG3217 Uncharacterized Fe-S protein; InterPro IPR005303:IPR005302; KEGG: dfe:Dfer_3013 MOSC domain containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; SPTR: MOSC domain protein; MOSC domain-containing protein complement(3086620..3087414) Cyclobacterium marinum DSM 745 11037691 YP_004774629.1 CDS Cycma_2659 NC_015914.1 3087610 3089529 D PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: mtt:Ftrac_1865 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein DnaK; TIGRFAM: Chaperone DnaK; molecular chaperone DnaK 3087610..3089529 Cyclobacterium marinum DSM 745 11037692 YP_004774630.1 CDS Cycma_2660 NC_015914.1 3089545 3089688 R hypothetical protein complement(3089545..3089688) Cyclobacterium marinum DSM 745 11037693 YP_004774631.1 CDS Cycma_2661 NC_015914.1 3089793 3090167 D PFAM: Chaperonin 10 Kd subunit; InterPro IPR020818; KEGG: shg:Sph21_4573 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SPTR: Chaperonin GroS; chaperonin Cpn10 3089793..3090167 Cyclobacterium marinum DSM 745 11037694 YP_004774632.1 CDS Cycma_2662 NC_015914.1 3090524 3090976 D hypothetical protein 3090524..3090976 Cyclobacterium marinum DSM 745 11037695 YP_004774633.1 CDS Cycma_2663 NC_015914.1 3091025 3093130 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001610:IPR000014:IPR003594:IPR013655:IPR 013656; KEGG: lil:LA_1860 histidine kinase sensor protein; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold-4; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 3091025..3093130 Cyclobacterium marinum DSM 745 11037696 YP_004774634.1 CDS Cycma_2664 NC_015914.1 3093105 3093197 R hypothetical protein complement(3093105..3093197) Cyclobacterium marinum DSM 745 11037697 YP_004774635.1 CDS Cycma_2665 NC_015914.1 3093227 3094396 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3093227..3094396) Cyclobacterium marinum DSM 745 11037698 YP_004774636.1 CDS Cycma_2666 NC_015914.1 3094514 3095812 R PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: shg:Sph21_3223 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; ammonium transporter complement(3094514..3095812) Cyclobacterium marinum DSM 745 11037699 YP_004774637.1 CDS Cycma_2667 NC_015914.1 3096310 3097278 R PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: sli:Slin_5386 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(3096310..3097278) Cyclobacterium marinum DSM 745 11037700 YP_004774638.1 CDS Cycma_2668 NC_015914.1 3097345 3098001 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR006439:IPR005834; KEGG: lby:Lbys_1526 had-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Glycoprotease/hydrolase, beta-phosphoglucomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily hydrolase complement(3097345..3098001) Cyclobacterium marinum DSM 745 11037701 YP_004774639.1 CDS Cycma_2669 NC_015914.1 3098004 3099287 R PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR010164:IPR005814; KEGG: mtt:Ftrac_2019 ornithine aminotransferase; PFAM: Aminotransferase class-III; SPTR: Ornithine aminotransferase; TIGRFAM: Ornithine aminotransferase; ornithine aminotransferase complement(3098004..3099287) Cyclobacterium marinum DSM 745 11037702 YP_004774640.1 CDS Cycma_2670 NC_015914.1 3099509 3099751 D PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: mtt:Ftrac_2018 LSU ribosomal protein l28p; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; 50S ribosomal protein L28 3099509..3099751 Cyclobacterium marinum DSM 745 11037703 YP_004774641.1 CDS Cycma_2671 NC_015914.1 3099786 3099968 D PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: phe:Phep_3522 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; 50S ribosomal protein L33 3099786..3099968 Cyclobacterium marinum DSM 745 11037704 YP_004774642.1 CDS Cycma_2672 NC_015914.1 3100000 3100152 D KEGG: dfe:Dfer_3608 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3100000..3100152 Cyclobacterium marinum DSM 745 11037705 YP_004774643.1 CDS Cycma_2673 NC_015914.1 3100242 3101198 D PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; COGs: COG0552 Signal recognition particle GTPase; InterPro IPR003593:IPR004390:IPR013822:IPR000897; KEGG: mtt:Ftrac_2015 signal recognition particle-docking protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY; signal recognition particle-docking protein FtsY 3100242..3101198 Cyclobacterium marinum DSM 745 11037706 YP_004774644.1 CDS Cycma_2674 NC_015914.1 3101458 3104958 D PFAM: Bacterial alpha-L-rhamnosidase; Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917:IPR008902; KEGG: sulfatase; PFAM: Sulfatase; Bacterial alpha-L-rhamnosidase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); sulfatase 3101458..3104958 Cyclobacterium marinum DSM 745 11037707 YP_004774645.1 CDS Cycma_2675 NC_015914.1 3105106 3105996 D PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: zpr:ZPR_2290 CDF family cation efflux protein; PFAM: Cation efflux protein; SPTR: CDF family cation efflux protein; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter 3105106..3105996 Cyclobacterium marinum DSM 745 11037708 YP_004774646.1 CDS Cycma_2676 NC_015914.1 3106398 3107285 D PFAM: Dienelactone hydrolase; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: sli:Slin_1487 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase; dienelactone hydrolase 3106398..3107285 Cyclobacterium marinum DSM 745 11037709 YP_004774647.1 CDS Cycma_2677 NC_015914.1 3107401 3108750 D PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: sli:Slin_6133 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase, M28A family; peptidase M28 3107401..3108750 Cyclobacterium marinum DSM 745 11037710 YP_004774648.1 CDS Cycma_2678 NC_015914.1 3108785 3110341 R KEGG: lch:Lcho_2482 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3108785..3110341) Cyclobacterium marinum DSM 745 11037711 YP_004774649.1 CDS Cycma_2679 NC_015914.1 3110334 3111203 R KEGG: lch:Lcho_2483 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3110334..3111203) Cyclobacterium marinum DSM 745 11037712 YP_004774650.1 CDS Cycma_2680 NC_015914.1 3111265 3111483 R hypothetical protein complement(3111265..3111483) Cyclobacterium marinum DSM 745 11037713 YP_004774651.1 CDS Cycma_2681 NC_015914.1 3111533 3111814 D PFAM: YCII-related domain; InterPro IPR005545; KEGG: mtt:Ftrac_1111 YCII-related protein; PFAM: YCII-related; SPTR: YCII-related protein; hypothetical protein 3111533..3111814 Cyclobacterium marinum DSM 745 11037714 YP_004774652.1 CDS Cycma_2682 NC_015914.1 3112021 3112929 D KEGG: phe:Phep_1054 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3112021..3112929 Cyclobacterium marinum DSM 745 11037715 YP_004774653.1 CDS Cycma_2683 NC_015914.1 3113320 3114288 D PFAM: Trehalose utilisation; KEGG: caa:Caka_1507 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3113320..3114288 Cyclobacterium marinum DSM 745 11037716 YP_004774654.1 CDS Cycma_2684 NC_015914.1 3114469 3115983 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03385 choline sulfatase; PFAM: Sulfatase; SPTR: Choline sulfatase; sulfatase 3114469..3115983 Cyclobacterium marinum DSM 745 11037717 YP_004774655.1 CDS Cycma_2685 NC_015914.1 3115973 3117685 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: gfo:GFO_1698 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 3115973..3117685 Cyclobacterium marinum DSM 745 11037718 YP_004774656.1 CDS Cycma_2686 NC_015914.1 3117746 3118762 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014182:IPR013154:IPR013149; KEGG: chu:CHU_1033 NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Zinc-containing alcohol dehydrogenase superfamily protein; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; zinc-binding alcohol dehydrogenase 3117746..3118762 Cyclobacterium marinum DSM 745 11037719 YP_004774657.1 CDS Cycma_2687 NC_015914.1 3119242 3120231 D COGs: COG0385 Na+-dependent transporter; KEGG: chu:CHU_0673 lipoprotein transmembrane protein; SPTR: Possible lipoprotein transmembrane protein; lipoprotein transmembrane protein 3119242..3120231 Cyclobacterium marinum DSM 745 11037720 YP_004774658.1 CDS Cycma_2688 NC_015914.1 3120361 3121161 R PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: mtt:Ftrac_1525 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: Membrane protein; TIGRFAM: Protein of unknown function DUF165; hypothetical protein complement(3120361..3121161) Cyclobacterium marinum DSM 745 11037721 YP_004774659.1 CDS Cycma_2689 NC_015914.1 3121164 3122078 R PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR013471; KEGG: mtt:Ftrac_1526 RNAse Z; SPTR: Ribonuclease Z; ribonuclease Z complement(3121164..3122078) Cyclobacterium marinum DSM 745 11037722 YP_004774660.1 CDS Cycma_2690 NC_015914.1 3122092 3122475 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: chu:CHU_1913 anti-anti-sigma regulatory factor; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-anti-sigma regulatory factor; TIGRFAM: Anti-sigma factor antagonist; anti-anti-sigma factor complement(3122092..3122475) Cyclobacterium marinum DSM 745 11037723 YP_004774661.1 CDS Cycma_2691 NC_015914.1 3122598 3123533 R PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro IPR001636; KEGG: chu:CHU_1912 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(3122598..3123533) Cyclobacterium marinum DSM 745 11037724 YP_004774662.1 CDS Cycma_2692 NC_015914.1 3123667 3124467 R PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: mtt:Ftrac_1201 MORN variant repeat-containing protein; SPTR: phophatidylinositol-4-phosphate 5-kinase; MORN repeat-containing protein complement(3123667..3124467) Cyclobacterium marinum DSM 745 11037725 YP_004774663.1 CDS Cycma_2693 NC_015914.1 3124490 3125689 R PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: mtt:Ftrac_1202 acetyl-CoA acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; acetyl-CoA acetyltransferase complement(3124490..3125689) Cyclobacterium marinum DSM 745 11037726 YP_004774664.1 CDS Cycma_2694 NC_015914.1 3125704 3126339 R KEGG: fsu:Fisuc_1659 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3125704..3126339) Cyclobacterium marinum DSM 745 11037727 YP_004774665.1 CDS Cycma_2695 NC_015914.1 3126323 3126976 R InterPro IPR019734; KEGG: sli:Slin_2668 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3126323..3126976) Cyclobacterium marinum DSM 745 11037728 YP_004774666.1 CDS Cycma_2696 NC_015914.1 3127000 3127965 R PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: mtt:Ftrac_1205 von willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatB protein; von Willebrand factor A complement(3127000..3127965) Cyclobacterium marinum DSM 745 11037729 YP_004774667.1 CDS Cycma_2697 NC_015914.1 3128405 3130819 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_1846 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; TonB-dependent receptor plug 3128405..3130819 Cyclobacterium marinum DSM 745 11037730 YP_004774668.1 CDS Cycma_2698 NC_015914.1 3130823 3131659 D KEGG: mtt:Ftrac_1845 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3130823..3131659 Cyclobacterium marinum DSM 745 11037731 YP_004774669.1 CDS Cycma_2699 NC_015914.1 3131730 3132566 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: mtt:Ftrac_2294 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3131730..3132566) Cyclobacterium marinum DSM 745 11037732 YP_004774670.1 CDS Cycma_2700 NC_015914.1 3132850 3133671 D PFAM: Acyltransferase; COGs: COG3176 hemolysin; InterPro IPR002123; KEGG: lby:Lbys_2965 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase; phospholipid/glycerol acyltransferase 3132850..3133671 Cyclobacterium marinum DSM 745 11037733 YP_004774671.1 CDS Cycma_2701 NC_015914.1 3133677 3134630 D KEGG: lby:Lbys_2966 hemolysin A; SPTR: Hemolysin; hemolysin A 3133677..3134630 Cyclobacterium marinum DSM 745 11037734 YP_004774672.1 CDS Cycma_2702 NC_015914.1 3134661 3135695 D PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: rba:RB5820 L-fucose dehydrogenase; PFAM: Aldo/keto reductase; SPTR: Probable L-fucose dehydrogenase; aldo/keto reductase 3134661..3135695 Cyclobacterium marinum DSM 745 11037735 YP_004774673.1 CDS Cycma_2703 NC_015914.1 3135720 3137018 D PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease; COGs: COG0738 Fucose permease; InterPro IPR005275:IPR011701; KEGG: etr:ETAE_0291 L-fucose permease; PFAM: Major facilitator superfamily MFS-1; SPTR: L-fucose:H+ symporter permease; TIGRFAM: L-fucose permease; L-fucose transporter 3135720..3137018 Cyclobacterium marinum DSM 745 11037736 YP_004774674.1 CDS Cycma_2704 NC_015914.1 3137257 3138609 D PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329 transposase; SPTR: transposase; transposase 3137257..3138609 Cyclobacterium marinum DSM 745 11037737 YP_004774675.1 CDS Cycma_2705 NC_015914.1 3138686 3138934 D hypothetical protein 3138686..3138934 Cyclobacterium marinum DSM 745 11037738 YP_004774676.1 CDS Cycma_2706 NC_015914.1 3138950 3140377 R PFAM: Glucuronate isomerase; COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: fbc:FB2170_10646 uronate isomerase; PFAM: Uronate isomerase; SPTR: Uronate isomerase; uronate isomerase complement(3138950..3140377) Cyclobacterium marinum DSM 745 11037739 YP_004774677.1 CDS Cycma_2707 NC_015914.1 3140617 3141513 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sus:Acid_1577 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3140617..3141513 Cyclobacterium marinum DSM 745 11037740 YP_004774678.1 CDS Cycma_2708 NC_015914.1 3141640 3143025 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: phe:Phep_2202 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein complement(3141640..3143025) Cyclobacterium marinum DSM 745 11037741 YP_004774679.1 CDS Cycma_2709 NC_015914.1 3143197 3143319 D hypothetical protein 3143197..3143319 Cyclobacterium marinum DSM 745 11037742 YP_004774680.1 CDS Cycma_2710 NC_015914.1 3143319 3143513 D hypothetical protein 3143319..3143513 Cyclobacterium marinum DSM 745 11037743 YP_004774681.1 CDS Cycma_2711 NC_015914.1 3143441 3144268 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cly:Celly_2212 UspA domain-containing protein; PFAM: UspA; SPTR: universal stress protein; UspA domain-containing protein complement(3143441..3144268) Cyclobacterium marinum DSM 745 11037744 YP_004774682.1 CDS Cycma_2712 NC_015914.1 3144434 3145030 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein complement(3144434..3145030) Cyclobacterium marinum DSM 745 11037745 YP_004774683.1 CDS Cycma_2713 NC_015914.1 3145330 3146076 R PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ROK family protein; PFAM: ROK; SPTR: Polyphosphate glucokinase; ROK family protein complement(3145330..3146076) Cyclobacterium marinum DSM 745 11037746 YP_004774684.1 CDS Cycma_2714 NC_015914.1 3146503 3147231 R SPTR: uncharacterized protein; hypothetical protein complement(3146503..3147231) Cyclobacterium marinum DSM 745 11037747 YP_004774685.1 CDS Cycma_2715 NC_015914.1 3147519 3148382 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: dfe:Dfer_2896 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; glucose-1-phosphate thymidylyltransferase 3147519..3148382 Cyclobacterium marinum DSM 745 11037748 YP_004774686.1 CDS Cycma_2716 NC_015914.1 3148565 3148924 D PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: zpr:ZPR_2906 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator; response regulator receiver 3148565..3148924 Cyclobacterium marinum DSM 745 11037749 YP_004774687.1 CDS Cycma_2717 NC_015914.1 3149077 3150609 R PFAM: Ppx/GppA phosphatase; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: gfo:GFO_3499 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(3149077..3150609) Cyclobacterium marinum DSM 745 11037750 YP_004774688.1 CDS Cycma_2718 NC_015914.1 3150606 3151334 R COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001450; KEGG: phe:Phep_3263 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; 4Fe-4S ferredoxin complement(3150606..3151334) Cyclobacterium marinum DSM 745 11037751 YP_004774689.1 CDS Cycma_2719 NC_015914.1 3151334 3153268 R PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280:IPR003953:IPR004112; KEGG: zpr:ZPR_1359 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; SPTR: Succinate dehydrogenase flavoprotein subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; succinate dehydrogenase or fumarate reductase, flavoprotein subunit complement(3151334..3153268) Cyclobacterium marinum DSM 745 11037752 YP_004774690.1 CDS Cycma_2720 NC_015914.1 3153556 3154437 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: gfo:GFO_0971 sterol desaturase; PFAM: Fatty acid hydroxylase; SPTR: uncharacterized protein; fatty acid hydroxylase 3153556..3154437 Cyclobacterium marinum DSM 745 11037753 YP_004774691.1 CDS Cycma_2721 NC_015914.1 3155074 3155574 D PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: fba:FIC_00652 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: Transcription elongation factor GreA; GreA/GreB family elongation factor 3155074..3155574 Cyclobacterium marinum DSM 745 11037754 YP_004774692.1 CDS Cycma_2722 NC_015914.1 3155636 3156676 R PFAM: Protein of unknown function (DUF3500); KEGG: sli:Slin_5988 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3155636..3156676) Cyclobacterium marinum DSM 745 11037755 YP_004774693.1 CDS Cycma_2723 NC_015914.1 3156725 3157894 R PFAM: FG-GAP repeat; InterPro IPR013517; KEGG: dfe:Dfer_4551 FG-GAP repeat protein; PFAM: FG-GAP; SPTR: uncharacterized protein; hypothetical protein complement(3156725..3157894) Cyclobacterium marinum DSM 745 11037756 YP_004774694.1 CDS Cycma_2724 NC_015914.1 3157974 3158639 R PFAM: NAD dependent epimerase/dehydratase; InterPro IPR001509; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3157974..3158639) Cyclobacterium marinum DSM 745 11037757 YP_004774695.1 CDS Cycma_2725 NC_015914.1 3158837 3159742 R PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268:IPR011270:IPR000845; KEGG: ppn:Palpr_2188 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: Nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: Purine nucleoside phosphorylase I, inosine/guanosine-specific; Inosine guanosine/xanthosine phosphorylase; purine nucleoside phosphorylase I complement(3158837..3159742) Cyclobacterium marinum DSM 745 11037758 YP_004774696.1 CDS Cycma_2726 NC_015914.1 3160134 3160658 D PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: mtt:Ftrac_3110 nadph-dependent fmn reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Flavin reductase; NADPH-dependent FMN reductase 3160134..3160658 Cyclobacterium marinum DSM 745 11037759 YP_004774697.1 CDS Cycma_2727 NC_015914.1 3160662 3162263 R PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; COGs: COG0206 Cell division GTPase; InterPro IPR000158:IPR003008:IPR018316; KEGG: mtt:Ftrac_3297 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; cell division protein FtsZ complement(3160662..3162263) Cyclobacterium marinum DSM 745 11037760 YP_004774698.1 CDS Cycma_2728 NC_015914.1 3162314 3163630 R PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR020823:IPR003494; KEGG: mtt:Ftrac_3296 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; cell division protein FtsA complement(3162314..3163630) Cyclobacterium marinum DSM 745 11037761 YP_004774699.1 CDS Cycma_2729 NC_015914.1 3163642 3164367 R KEGG: chu:CHU_2737 cell division protein; SPTR: Cell division protein; cell division protein complement(3163642..3164367) Cyclobacterium marinum DSM 745 11037762 YP_004774700.1 CDS Cycma_2730 NC_015914.1 3164396 3165796 R PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR005758:IPR000713:IPR013221:IPR004101; KEGG: mtt:Ftrac_3294 UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(3164396..3165796) Cyclobacterium marinum DSM 745 11037763 YP_004774701.1 CDS Cycma_2731 NC_015914.1 3165793 3166905 R PFAM: Glycosyltransferase 28 N-terminal domain; Glycosyltransferase 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; InterPro IPR006009:IPR004276:IPR007235; KEGG: mtt:Ftrac_3293 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(3165793..3166905) Cyclobacterium marinum DSM 745 11037764 YP_004774702.1 CDS Cycma_2732 NC_015914.1 3166910 3168079 R PFAM: Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: mtt:Ftrac_3292 cell cycle protein; PFAM: Cell cycle protein; SPTR: Cell division protein; cell cycle protein complement(3166910..3168079) Cyclobacterium marinum DSM 745 11037765 YP_004774703.1 CDS Cycma_2733 NC_015914.1 3168082 3169425 R PFAM: Mur ligase, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR005762:IPR013221:IPR004101; KEGG: sli:Slin_4750 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(3168082..3169425) Cyclobacterium marinum DSM 745 11037766 YP_004774704.1 CDS Cycma_2734 NC_015914.1 3169426 3170637 R PFAM: Glycosyl transferase 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR003524:IPR018480:IPR018481; KEGG: mtt:Ftrac_3290 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(3169426..3170637) Cyclobacterium marinum DSM 745 11037767 YP_004774705.1 CDS Cycma_2735 NC_015914.1 3170639 3172105 R PFAM: Mur ligase, catalytic domain; Mur ligase, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR005761:IPR000713:IPR013221:IPR004101; KEGG: mtt:Ftrac_3289 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; SPTR: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelateligase complement(3170639..3172105) Cyclobacterium marinum DSM 745 11037768 YP_004774706.1 CDS Cycma_2736 NC_015914.1 3172102 3174189 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005543:IPR005311:IPR001460; KEGG: chu:CHU_2746 cell division protein, penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA; SMART: PASTA; SPTR: penicillin-binding protein 2; penicillin-binding protein transpeptidase complement(3172102..3174189) Cyclobacterium marinum DSM 745 11037769 YP_004774707.1 CDS Cycma_2737 NC_015914.1 3174207 3174587 R KEGG: mtt:Ftrac_3287 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3174207..3174587) Cyclobacterium marinum DSM 745 11037770 YP_004774708.1 CDS Cycma_2738 NC_015914.1 3174590 3175495 R PFAM: MraW methylase; TIGRFAM: S-adenosyl-methyltransferase MraW; COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: mtt:Ftrac_3286 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; ribosomal RNA small subunit methyltransferase H complement(3174590..3175495) Cyclobacterium marinum DSM 745 11037771 YP_004774709.1 CDS Cycma_2739 NC_015914.1 3175488 3175937 R PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR003444:IPR020603; KEGG: mtt:Ftrac_3285 mraz protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; protein mraZ complement(3175488..3175937) Cyclobacterium marinum DSM 745 11037772 YP_004774710.1 CDS Cycma_2740 NC_015914.1 3176265 3177311 R PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mtt:Ftrac_0985 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Octaprenyl-diphosphate synthase; polyprenyl synthetase complement(3176265..3177311) Cyclobacterium marinum DSM 745 11037773 YP_004774711.1 CDS Cycma_2741 NC_015914.1 3177358 3179052 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG2937 Glycerol-3-phosphate O-acyltransferase; InterPro IPR002123; KEGG: mtt:Ftrac_3757 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: acyltransferase; phospholipid/glycerol acyltransferase 3177358..3179052 Cyclobacterium marinum DSM 745 11037774 YP_004774712.1 CDS Cycma_2742 NC_015914.1 3179024 3180091 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; InterPro IPR011128:IPR006109; KEGG: mtt:Ftrac_3756 glycerol 3-phosphate dehydrogenase (nad(p)+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; glycerol-3-phosphate dehydrogenase (NAD(P)+) 3179024..3180091 Cyclobacterium marinum DSM 745 11037775 YP_004774713.1 CDS Cycma_2743 NC_015914.1 3180269 3181078 D PFAM: Calcineurin-like phosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: rba:RB5263 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Chromosome 2 SCAF14738, whole genome shotgun sequence.; metallophosphoesterase 3180269..3181078 Cyclobacterium marinum DSM 745 11037776 YP_004774714.1 CDS Cycma_2744 NC_015914.1 3181164 3181958 D SPTR: uncharacterized protein; hypothetical protein 3181164..3181958 Cyclobacterium marinum DSM 745 11037777 YP_004774715.1 CDS Cycma_2745 NC_015914.1 3182022 3182813 R PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: kva:Kvar_3375 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase complement(3182022..3182813) Cyclobacterium marinum DSM 745 11037778 YP_004774716.1 CDS Cycma_2746 NC_015914.1 3182859 3184088 R PFAM: Peptidase M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: mtt:Ftrac_3155 STE24 endopeptidase; PFAM: Peptidase M48, Ste24p; SPTR: Ste24 endopeptidase; peptidase M48 Ste24p complement(3182859..3184088) Cyclobacterium marinum DSM 745 11037779 YP_004774717.1 CDS Cycma_2747 NC_015914.1 3184101 3185150 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_3154 membrane protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(3184101..3185150) Cyclobacterium marinum DSM 745 11037780 YP_004774718.1 CDS Cycma_2748 NC_015914.1 3185231 3190321 D KEGG: mtt:Ftrac_3153 pkd domain containing protein; SPTR: uncharacterized protein; hypothetical protein 3185231..3190321 Cyclobacterium marinum DSM 745 11037781 YP_004774719.1 CDS Cycma_2749 NC_015914.1 3190325 3191077 D PFAM: Protein of unknown function (DUF328); COGs: COG3022 conserved hypothetical protein; HAMAP: UPF0246 protein yaaA; InterPro IPR005583; KEGG: xne:XNC1_0702 hypothetical protein; PFAM: Protein of unknown function DUF328; SPTR: UPF0246 protein ALPR1_05590; hypothetical protein 3190325..3191077 Cyclobacterium marinum DSM 745 11037782 YP_004774720.1 CDS Cycma_2750 NC_015914.1 3191287 3192384 D PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: sat:SYN_02683 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 3191287..3192384 Cyclobacterium marinum DSM 745 11037783 YP_004774721.1 CDS Cycma_2751 NC_015914.1 3192412 3193167 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mtt:Ftrac_3122 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase; type 11 methyltransferase complement(3192412..3193167) Cyclobacterium marinum DSM 745 11037784 YP_004774722.1 CDS Cycma_2752 NC_015914.1 3193374 3194687 D COGs: COG1566 Multidrug resistance efflux pump; KEGG: mtt:Ftrac_3121 efflux transporter, rnd family, mfp subunit; SPTR: Efflux transporter, RND family, MFP subunit; RND family efflux transporter mfp subunit 3193374..3194687 Cyclobacterium marinum DSM 745 11037785 YP_004774723.1 CDS Cycma_2753 NC_015914.1 3194742 3196055 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: mtt:Ftrac_3120 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 3194742..3196055 Cyclobacterium marinum DSM 745 11037786 YP_004774724.1 CDS Cycma_2754 NC_015914.1 3196048 3197538 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_3119 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: exported outer membrane protein; outer membrane efflux protein 3196048..3197538 Cyclobacterium marinum DSM 745 11037787 YP_004774725.1 CDS Cycma_2755 NC_015914.1 3197772 3198224 R hypothetical protein complement(3197772..3198224) Cyclobacterium marinum DSM 745 11037788 YP_004774726.1 CDS Cycma_2756 NC_015914.1 3198350 3199867 R hypothetical protein complement(3198350..3199867) Cyclobacterium marinum DSM 745 11037789 YP_004774727.1 CDS Cycma_2757 NC_015914.1 3200211 3201662 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase; InterPro IPR004522:IPR004365:IPR004364; KEGG: mtt:Ftrac_3604 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; asparaginyl-tRNA synthetase complement(3200211..3201662) Cyclobacterium marinum DSM 745 11037790 YP_004774728.1 CDS Cycma_2758 NC_015914.1 3201840 3203294 D PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: mtt:Ftrac_3605 RNA polymerase, sigma 54 subunit, RpoN/SigL; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma factor 54; RNA polymerase sigma 54 subunit RpoN 3201840..3203294 Cyclobacterium marinum DSM 745 11037791 YP_004774729.1 CDS Cycma_2759 NC_015914.1 3203357 3203917 D PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: mtt:Ftrac_3606 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: uncharacterized protein; PA-phosphatase-like phosphoesterase 3203357..3203917 Cyclobacterium marinum DSM 745 11037792 YP_004774730.1 CDS Cycma_2760 NC_015914.1 3203980 3204714 R KEGG: mtt:Ftrac_3608 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3203980..3204714) Cyclobacterium marinum DSM 745 11037793 YP_004774731.1 CDS Cycma_2761 NC_015914.1 3210948 3211898 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: pbs:Plabr_4063 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable IolI protein; xylose isomerase domain-containing protein complement(3210948..3211898) Cyclobacterium marinum DSM 745 11037798 YP_004774732.1 CDS Cycma_2762 NC_015914.1 3212057 3212998 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: shg:Sph21_4487 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Probable glycosyl hydrolase; hypothetical protein complement(3212057..3212998) Cyclobacterium marinum DSM 745 11037799 YP_004774733.1 CDS Cycma_2763 NC_015914.1 3213599 3213844 D hypothetical protein 3213599..3213844 Cyclobacterium marinum DSM 745 11037800 YP_004774734.1 CDS Cycma_2764 NC_015914.1 3214184 3215080 D KEGG: psl:Psta_2085 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3214184..3215080 Cyclobacterium marinum DSM 745 11037801 YP_004774735.1 CDS Cycma_2765 NC_015914.1 3215125 3215697 R KEGG: cly:Celly_2858 phosphoesterase PA-phosphatase-like protein; SPTR: Phosphoesterase PA-phosphatase related protein; PA-phosphatase-like phosphoesterase complement(3215125..3215697) Cyclobacterium marinum DSM 745 11037802 YP_004774736.1 CDS Cycma_2766 NC_015914.1 3215937 3216521 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: chu:CHU_1271 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; imidazole glycerol phosphate synthase subunit HisH 3215937..3216521 Cyclobacterium marinum DSM 745 11037803 YP_004774737.1 CDS Cycma_2767 NC_015914.1 3216521 3217243 D PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; InterPro IPR006063:IPR006062; KEGG: lby:Lbys_2915 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 3216521..3217243 Cyclobacterium marinum DSM 745 11037804 YP_004774738.1 CDS Cycma_2768 NC_015914.1 3217245 3218006 D PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; InterPro IPR004651:IPR006062; KEGG: lby:Lbys_2914 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; imidazole glycerol phosphate synthase subunit HisF 3217245..3218006 Cyclobacterium marinum DSM 745 11037805 YP_004774739.1 CDS Cycma_2769 NC_015914.1 3218056 3218661 D PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Histidine biosynthesis bifunctional protein hisIE; InterPro IPR008179:IPR002496; KEGG: lby:Lbys_2393 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase; SPTR: Phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; histidine biosynthesis bifunctional protein hisIE 3218056..3218661 Cyclobacterium marinum DSM 745 11037806 YP_004774740.1 CDS Cycma_2770 NC_015914.1 3218675 3219085 D PFAM: AIG2-like family; InterPro IPR009288; KEGG: rpe:RPE_1058 hypothetical protein; PFAM: AIG2-like; SPTR: uncharacterized protein; AIG2 family protein 3218675..3219085 Cyclobacterium marinum DSM 745 11037807 YP_004774741.1 CDS Cycma_2771 NC_015914.1 3219167 3219562 D SPTR: uncharacterized protein; hypothetical protein 3219167..3219562 Cyclobacterium marinum DSM 745 11037808 YP_004774742.1 CDS Cycma_2772 NC_015914.1 3219662 3223486 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR001036:IPR005661; KEGG: mtt:Ftrac_2113 acriflavin resistance protein; PFAM: Acriflavin resistance protein; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; SPTR: Acriflavin resistance protein; acriflavin resistance protein 3219662..3223486 Cyclobacterium marinum DSM 745 11037809 YP_004774743.1 CDS Cycma_2773 NC_015914.1 3223483 3224712 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_2112 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 3223483..3224712 Cyclobacterium marinum DSM 745 11037810 YP_004774744.1 CDS Cycma_2774 NC_015914.1 3224714 3225172 D PFAM: Domain of unknown function (DUF305); InterPro IPR005183; KEGG: ote:Oter_4398 hypothetical protein; PFAM: Protein of unknown function DUF305; SPTR: uncharacterized protein; manually curated; hypothetical protein 3224714..3225172 Cyclobacterium marinum DSM 745 11037811 YP_004774745.1 CDS Cycma_2775 NC_015914.1 3225205 3226983 D PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; SPTR: metal transport-related, exported protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3225205..3226983 Cyclobacterium marinum DSM 745 11037812 YP_004774746.1 CDS Cycma_2776 NC_015914.1 3227109 3227651 D PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: mtt:Ftrac_1263 polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Polyketide cyclase/dehydrase; polyketide cyclase/dehydrase 3227109..3227651 Cyclobacterium marinum DSM 745 11037813 YP_004774747.1 CDS Cycma_2777 NC_015914.1 3227709 3228413 R PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; HAMAP: 2-phosphosulfolactate phosphatase; InterPro IPR005238; KEGG: mtt:Ftrac_1906 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; SPTR: 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase complement(3227709..3228413) Cyclobacterium marinum DSM 745 11037814 YP_004774748.1 CDS Cycma_2778 NC_015914.1 3228410 3229501 R PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR006223:IPR006222:IPR013977; KEGG: cly:Celly_0288 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein; glycine cleavage system protein T complement(3228410..3229501) Cyclobacterium marinum DSM 745 11037815 YP_004774749.1 CDS Cycma_2779 NC_015914.1 3229813 3231186 R PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(3229813..3231186) Cyclobacterium marinum DSM 745 11037816 YP_004774750.1 CDS Cycma_2780 NC_015914.1 3231198 3234266 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_4206 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(3231198..3234266) Cyclobacterium marinum DSM 745 11037817 YP_004774751.1 CDS Cycma_2781 NC_015914.1 3234720 3235046 R PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092:IPR000361; KEGG: mtt:Ftrac_1573 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; iron-sulfur cluster assembly accessory protein complement(3234720..3235046) Cyclobacterium marinum DSM 745 11037818 YP_004774752.1 CDS Cycma_2782 NC_015914.1 3235097 3235357 D hypothetical protein 3235097..3235357 Cyclobacterium marinum DSM 745 11037819 YP_004774753.1 CDS Cycma_2783 NC_015914.1 3235350 3236381 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283:IPR000728:IPR010918; KEGG: mtt:Ftrac_1576 thiamine-phosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Thiamine-phosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; thiamine-monophosphate kinase 3235350..3236381 Cyclobacterium marinum DSM 745 11037820 YP_004774754.1 CDS Cycma_2784 NC_015914.1 3236414 3236791 R KEGG: mtt:Ftrac_3094 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3236414..3236791) Cyclobacterium marinum DSM 745 11037821 YP_004774755.1 CDS Cycma_2785 NC_015914.1 3236788 3238200 R PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566:IPR002792:IPR010280; KEGG: mtt:Ftrac_0805 23S rRNA m(5)u-1939 methyltransferase; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: 23S rRNA (Uracil-5-)-methyltransferase RumA; TIGRFAM: 23S rRNA methyltransferase/RumA; TrmA family RNA methyltransferase complement(3236788..3238200) Cyclobacterium marinum DSM 745 11037822 YP_004774756.1 CDS Cycma_2787 NC_015914.1 3238801 3239907 D KEGG: bvu:BVU_0066 hypothetical protein; SPTR: exported protein; hypothetical protein 3238801..3239907 Cyclobacterium marinum DSM 745 11037824 YP_004774757.1 CDS Cycma_2788 NC_015914.1 3239914 3240411 D hypothetical protein 3239914..3240411 Cyclobacterium marinum DSM 745 11037825 YP_004774758.1 CDS Cycma_2789 NC_015914.1 3240561 3240722 R hypothetical protein complement(3240561..3240722) Cyclobacterium marinum DSM 745 11037826 YP_004774759.1 CDS Cycma_2790 NC_015914.1 3240936 3241748 D PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: psn:Pedsa_1400 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Dehydrogenase/reductase SDR family member 7B; short-chain dehydrogenase/reductase SDR 3240936..3241748 Cyclobacterium marinum DSM 745 11037827 YP_004774760.1 CDS Cycma_2791 NC_015914.1 3241748 3245749 D PFAM: Uncharacterized conserved protein (DUF2075); COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: mtt:Ftrac_2575 superfamily I DNA helicase; SPTR: Superfamily I DNA helicase; superfamily I DNA helicase 3241748..3245749 Cyclobacterium marinum DSM 745 11037828 YP_004774761.1 CDS Cycma_2792 NC_015914.1 3245851 3246348 R TIGRFAM: gliding motility-associated lipoprotein GldH; InterPro IPR020018; KEGG: chu:CHU_0291 motility protein; SPTR: Lipoprotein; TIGRFAM: Gliding motility-associated lipoprotein, GldH; gliding motility-associated lipoprotein GldH complement(3245851..3246348) Cyclobacterium marinum DSM 745 11037829 YP_004774762.1 CDS Cycma_2793 NC_015914.1 3246314 3247693 R PFAM: PSP1 C-terminal conserved region; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: mtt:Ftrac_3345 PSP1 domain protein; PFAM: PSP1, C-terminal; SPTR: Stage 0 sporulation protein YaaT; manually curated; PSP1 domain-containing protein complement(3246314..3247693) Cyclobacterium marinum DSM 745 11037830 YP_004774763.1 CDS Cycma_2794 NC_015914.1 3247739 3249034 R PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: mtt:Ftrac_3346 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase complement(3247739..3249034) Cyclobacterium marinum DSM 745 11037831 YP_004774764.1 CDS Cycma_2795 NC_015914.1 3249052 3251229 R PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR006293:IPR018329:IPR014001:IPR001650:IPR 002121:IPR011545:IPR018982; KEGG: mtt:Ftrac_3348 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; ATP-dependent DNA helicase RecQ complement(3249052..3251229) Cyclobacterium marinum DSM 745 11037832 YP_004774765.1 CDS Cycma_2796 NC_015914.1 3251328 3252296 D PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR000644:IPR001347; KEGG: chu:CHU_0298 KpsF/GutQ family sugar isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ; KpsF/GutQ family protein 3251328..3252296 Cyclobacterium marinum DSM 745 11037833 YP_004774766.1 CDS Cycma_2797 NC_015914.1 3252299 3253375 D PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: sli:Slin_5196 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Mannose-1-phosphate guanylyltransferase; nucleotidyl transferase 3252299..3253375 Cyclobacterium marinum DSM 745 11037834 YP_004774767.1 CDS Cycma_2798 NC_015914.1 3253386 3254195 R PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; COGs: COG2103 sugar phosphate isomerase; HAMAP: N-acetylmuramic acid 6-phosphate etherase; InterPro IPR005488; KEGG: dfe:Dfer_3685 N-acetylmuramic acid-6-phosphate etherase; SPTR: N-acetylmuramic acid 6-phosphate etherase; TIGRFAM: Glucokinase regulatory-like protein; N-acetylmuramic acid 6-phosphate etherase complement(3253386..3254195) Cyclobacterium marinum DSM 745 11037835 YP_004774768.1 CDS Cycma_2799 NC_015914.1 3254192 3255034 R COGs: COG2971 N-acetylglucosamine kinase; KEGG: bfs:BF0368 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3254192..3255034) Cyclobacterium marinum DSM 745 11037836 YP_004774769.1 CDS Cycma_2800 NC_015914.1 3255035 3255262 R PFAM: Cytochrome b5-like Heme/Steroid binding domain; InterPro IPR001199; KEGG: phe:Phep_3698 cytochrome b5; PFAM: Cytochrome b5; SPTR: uncharacterized protein; cytochrome b5 complement(3255035..3255262) Cyclobacterium marinum DSM 745 11037837 YP_004774770.1 CDS Cycma_2801 NC_015914.1 3255314 3256471 R PFAM: Arginase; InterPro IPR006035; KEGG: mtt:Ftrac_2821 arginase/agmatinase/formiminoglutamase; PFAM: Ureohydrolase; SPTR: Formiminoglutamase-related protein; arginase complement(3255314..3256471) Cyclobacterium marinum DSM 745 11037838 YP_004774771.1 CDS Cycma_2802 NC_015914.1 3256721 3258025 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205:IPR001041:IPR001433; KEGG: mtt:Ftrac_1690 NADH:ubiquinone oxidoreductase, subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; NADH:ubiquinone oxidoreductase subunit F complement(3256721..3258025) Cyclobacterium marinum DSM 745 11037839 YP_004774772.1 CDS Cycma_2803 NC_015914.1 3258150 3258992 R PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; InterPro IPR000438:IPR000022; KEGG: mtt:Ftrac_1693 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta complement(3258150..3258992) Cyclobacterium marinum DSM 745 11037840 YP_004774773.1 CDS Cycma_2804 NC_015914.1 3259096 3260151 R PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: shg:Sph21_0356 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(3259096..3260151) Cyclobacterium marinum DSM 745 11037841 YP_004774774.1 CDS Cycma_2805 NC_015914.1 3260307 3261941 D PFAM: Carbon starvation protein CstA; COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: mtt:Ftrac_2374 carbon starvation protein CstA; PFAM: Carbon starvation protein CstA; SPTR: Carbon starvation protein A; carbon starvation protein CstA 3260307..3261941 Cyclobacterium marinum DSM 745 11037842 YP_004774775.1 CDS Cycma_2806 NC_015914.1 3262015 3262599 R KEGG: mtt:Ftrac_1015 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3262015..3262599) Cyclobacterium marinum DSM 745 11037843 YP_004774776.1 CDS Cycma_2807 NC_015914.1 3263018 3263812 D KEGG: rbi:RB2501_07210 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3263018..3263812 Cyclobacterium marinum DSM 745 11037844 YP_004774777.1 CDS Cycma_2808 NC_015914.1 3263923 3264177 R SPTR: uncharacterized protein; hypothetical protein complement(3263923..3264177) Cyclobacterium marinum DSM 745 11037845 YP_004774778.1 CDS Cycma_2809 NC_015914.1 3264372 3267191 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR006275:IPR005481:IPR005479:IPR005480; KEGG: mtt:Ftrac_1723 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; carbamoyl-phosphate synthase large subunit complement(3264372..3267191) Cyclobacterium marinum DSM 745 11037846 YP_004774779.1 CDS Cycma_2810 NC_015914.1 3267692 3268135 D hypothetical protein 3267692..3268135 Cyclobacterium marinum DSM 745 11037847 YP_004774780.1 CDS Cycma_2811 NC_015914.1 3268172 3268825 D hypothetical protein 3268172..3268825 Cyclobacterium marinum DSM 745 11037848 YP_004774781.1 CDS Cycma_2812 NC_015914.1 3269312 3269929 D KEGG: ttu:TERTU_2611 hypothetical protein; SPTR: Glutamate--tRNA ligase; hypothetical protein 3269312..3269929 Cyclobacterium marinum DSM 745 11037849 YP_004774782.1 CDS Cycma_2813 NC_015914.1 3269933 3270880 R PFAM: Xylose isomerase-like TIM barrel; InterPro IPR012307; KEGG: gfo:GFO_1146 TIM barrel domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Protein containing xylose isomerase-like TIM barrel domain; xylose isomerase domain-containing protein complement(3269933..3270880) Cyclobacterium marinum DSM 745 11037850 YP_004774783.1 CDS Cycma_2814 NC_015914.1 3270959 3271624 R PFAM: Orthopoxvirus protein of unknown function (DUF830); InterPro IPR010529; KEGG: smt:Smal_3805 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3270959..3271624) Cyclobacterium marinum DSM 745 11037851 YP_004774784.1 CDS Cycma_2815 NC_015914.1 3271621 3271908 R SPTR: uncharacterized protein; hypothetical protein complement(3271621..3271908) Cyclobacterium marinum DSM 745 11037852 YP_004774785.1 CDS Cycma_2816 NC_015914.1 3271905 3273560 R PFAM: PHP domain; COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR003583:IPR003141:IPR004013; KEGG: mtt:Ftrac_0797 php domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; SPTR: PHP domain protein; PHP domain-containing protein complement(3271905..3273560) Cyclobacterium marinum DSM 745 11037853 YP_004774786.1 CDS Cycma_2817 NC_015914.1 3273927 3275516 D KEGG: mtt:Ftrac_0798 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3273927..3275516 Cyclobacterium marinum DSM 745 11037854 YP_004774787.1 CDS Cycma_2818 NC_015914.1 3275549 3276118 D PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: mtt:Ftrac_0799 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR; phosphoribosyltransferase 3275549..3276118 Cyclobacterium marinum DSM 745 11037855 YP_004774788.1 CDS Cycma_2819 NC_015914.1 3276121 3277044 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase; InterPro IPR002082:IPR006132:IPR006131; KEGG: sli:Slin_0344 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; aspartate carbamoyltransferase 3276121..3277044 Cyclobacterium marinum DSM 745 11037856 YP_004774789.1 CDS Cycma_2820 NC_015914.1 3277103 3278470 D PFAM: CBS domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase; COGs: COG0031 Cysteine synthase; InterPro IPR000644:IPR001926; KEGG: mtt:Ftrac_0803 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Cysteine synthase; pyridoxal-5'-phosphate-dependent protein beta subunit 3277103..3278470 Cyclobacterium marinum DSM 745 11037857 YP_004774790.1 CDS Cycma_2821 NC_015914.1 3278506 3279141 D KEGG: cpb:Cphamn1_2098 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3278506..3279141 Cyclobacterium marinum DSM 745 11037858 YP_004774791.1 CDS Cycma_2822 NC_015914.1 3279484 3282036 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: gfo:GFO_3052 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SPTR: Sensor histidine kinase/response regulator; histidine kinase 3279484..3282036 Cyclobacterium marinum DSM 745 11037859 YP_004774792.1 CDS Cycma_2823 NC_015914.1 3282033 3283400 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: shg:Sph21_3147 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Sigma-54 dependent DNA-binding response regulator; Fis family transcriptional regulator complement(3282033..3283400) Cyclobacterium marinum DSM 745 11037860 YP_004774793.1 CDS Cycma_2824 NC_015914.1 3283499 3283873 R hypothetical protein complement(3283499..3283873) Cyclobacterium marinum DSM 745 11037861 YP_004774794.1 CDS Cycma_2825 NC_015914.1 3283887 3284078 D hypothetical protein 3283887..3284078 Cyclobacterium marinum DSM 745 11037862 YP_004774795.1 CDS Cycma_2826 NC_015914.1 3284173 3284988 D PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391:IPR015942; KEGG: dfe:Dfer_3460 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase; glutamate racemase 3284173..3284988 Cyclobacterium marinum DSM 745 11037863 YP_004774796.1 CDS Cycma_2827 NC_015914.1 3285133 3287019 D PFAM: Glutamine amidotransferases class-II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: sli:Slin_5971 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; SPTR: amidophosphoribosyltransferase; glutamine amidotransferase 3285133..3287019 Cyclobacterium marinum DSM 745 11037864 YP_004774797.1 CDS Cycma_2828 NC_015914.1 3287032 3288084 D PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: mtt:Ftrac_1155 aminopeptidase; PFAM: Peptidase M42; SPTR: M42 glutamyl aminopeptidase; peptidase M42 family protein 3287032..3288084 Cyclobacterium marinum DSM 745 11037865 YP_004774798.1 CDS Cycma_2829 NC_015914.1 3288251 3288667 R KEGG: mtt:Ftrac_2823 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3288251..3288667) Cyclobacterium marinum DSM 745 11037866 YP_004774799.1 CDS Cycma_2830 NC_015914.1 3288687 3289292 R PFAM: Protein of unknown function, DUF479; COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: fbc:FB2170_12051 hypothetical protein; PFAM: Acyl carrier protein phosphodiesterase; SPTR: Acyl carrier protein phosphodiesterase; ACP phosphodieterase complement(3288687..3289292) Cyclobacterium marinum DSM 745 11037867 YP_004774800.1 CDS Cycma_2831 NC_015914.1 3289369 3291294 D TIGRFAM: DNA helicase, COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR003593; KEGG: sli:Slin_3380 ATPase AAA; SMART: ATPase, AAA+ type, core; SPTR: DNA-binding protein SMUBP-2; ATPase AAA 3289369..3291294 Cyclobacterium marinum DSM 745 11037868 YP_004774801.1 CDS Cycma_2832 NC_015914.1 3291304 3291843 R KEGG: pdi:BDI_2512 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3291304..3291843) Cyclobacterium marinum DSM 745 11037869 YP_004774802.1 CDS Cycma_2833 NC_015914.1 3291855 3292454 R KEGG: gfo:GFO_2225 secreted protein; SPTR: Secreted protein; hypothetical protein complement(3291855..3292454) Cyclobacterium marinum DSM 745 11037870 YP_004774803.1 CDS Cycma_2834 NC_015914.1 3292593 3294386 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein lepA; InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842; KEGG: chu:CHU_1717 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor 4; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; GTP-binding protein LepA 3292593..3294386 Cyclobacterium marinum DSM 745 11037871 YP_004774804.1 CDS Cycma_2835 NC_015914.1 3294472 3295371 D PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672:IPR020630:IPR020631; KEGG: sli:Slin_1575 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; SPTR: Bifunctional protein FolD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD 3294472..3295371 Cyclobacterium marinum DSM 745 11037872 YP_004774805.1 CDS Cycma_2836 NC_015914.1 3295426 3296055 D PFAM: Radical SAM superfamily; COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: mtt:Ftrac_2877 radical sam domain protein; PFAM: Radical SAM; SPTR: Radical activating enzyme; radical SAM domain-containing protein 3295426..3296055 Cyclobacterium marinum DSM 745 11037873 YP_004774806.1 CDS Cycma_2837 NC_015914.1 3296062 3297981 D PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: dfe:Dfer_0087 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: outer membrane protein, OmpA family; OmpA/MotB domain-containing protein 3296062..3297981 Cyclobacterium marinum DSM 745 11037874 YP_004774807.1 CDS Cycma_2838 NC_015914.1 3298036 3301113 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: srm:SRM_02406 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 3298036..3301113 Cyclobacterium marinum DSM 745 11037875 YP_004774808.1 CDS Cycma_2839 NC_015914.1 3301121 3302563 D PFAM: SusD family; InterPro IPR012944; KEGG: srm:SRM_02405 outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD; SPTR: outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein 3301121..3302563 Cyclobacterium marinum DSM 745 11037876 YP_004774809.1 CDS Cycma_2840 NC_015914.1 3302563 3303387 D KEGG: shg:Sph21_1774 hypothetical protein; hypothetical protein 3302563..3303387 Cyclobacterium marinum DSM 745 11037877 YP_004774810.1 CDS Cycma_2841 NC_015914.1 3303629 3307075 D PFAM: Subtilase; InterPro IPR000209; KEGG: sli:Slin_5991 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: MAM domain protein; peptidase S8 and S53 subtilisin kexin sedolisin 3303629..3307075 Cyclobacterium marinum DSM 745 11037878 YP_004774811.1 CDS Cycma_2842 NC_015914.1 3307229 3308641 R KEGG: sli:Slin_3697 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3307229..3308641) Cyclobacterium marinum DSM 745 11037879 YP_004774812.1 CDS Cycma_2843 NC_015914.1 3309068 3310222 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; transposase IS4 family protein 3309068..3310222 Cyclobacterium marinum DSM 745 11037880 YP_004774813.1 CDS Cycma_2844 NC_015914.1 3310255 3311037 R PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); hypothetical protein complement(3310255..3311037) Cyclobacterium marinum DSM 745 11037881 YP_004774814.1 CDS Cycma_2845 NC_015914.1 3311758 3312177 D PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: mtt:Ftrac_3564 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl tetrahydrobiopterin synthase; hypothetical protein 3311758..3312177 Cyclobacterium marinum DSM 745 11037882 YP_004774815.1 CDS Cycma_2846 NC_015914.1 3312207 3313313 D PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: mtt:Ftrac_3472 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19; SPTR: Lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19; lipid-A-disaccharide synthase 3312207..3313313 Cyclobacterium marinum DSM 745 11037883 YP_004774816.1 CDS Cycma_2847 NC_015914.1 3313310 3314533 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR004487:IPR003593:IPR010603:IPR013093:IPR 019489; KEGG: mtt:Ftrac_1139 ATP-dependent clp protease ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: Clp protease, ATP-binding subunit ClpX; sigma 54 interacting domain-containing protein complement(3313310..3314533) Cyclobacterium marinum DSM 745 11037884 YP_004774817.1 CDS Cycma_2848 NC_015914.1 3314541 3315212 R PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: ATP-dependent Clp protease proteolytic subunit; InterPro IPR001907; KEGG: mtt:Ftrac_1138 ATP-dependent clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; SPTR: ATP-dependent Clp protease proteolytic subunit; ATP-dependent Clp protease proteolytic subunit complement(3314541..3315212) Cyclobacterium marinum DSM 745 11037885 YP_004774818.1 CDS Cycma_2849 NC_015914.1 3315296 3316624 R PFAM: Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215:IPR008881; KEGG: mtt:Ftrac_1137 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor; trigger factor complement(3315296..3316624) Cyclobacterium marinum DSM 745 11037886 YP_004774819.1 CDS Cycma_2850 NC_015914.1 3317029 3319248 D PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR004811:IPR003607:IPR006674:IPR007685:IPR 004095:IPR002912; KEGG: mtt:Ftrac_1136 (p)ppGpp synthetase I, spot/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT protein; (p)ppGpp synthetase I SpoT/RelA 3317029..3319248 Cyclobacterium marinum DSM 745 11037888 YP_004774820.1 CDS Cycma_2851 NC_015914.1 3319307 3319795 D PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: chu:CHU_1703 ferric uptake regulator protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator protein; Fur family ferric uptake regulator 3319307..3319795 Cyclobacterium marinum DSM 745 11037889 YP_004774821.1 CDS Cycma_2852 NC_015914.1 3319806 3320150 D PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: mtt:Ftrac_1134 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; anti-anti-sigma factor 3319806..3320150 Cyclobacterium marinum DSM 745 11037890 YP_004774822.1 CDS Cycma_2853 NC_015914.1 3320272 3321537 D PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: mtt:Ftrac_1133 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; adenylosuccinate synthetase 3320272..3321537 Cyclobacterium marinum DSM 745 11037891 YP_004774823.1 CDS Cycma_2854 NC_015914.1 3322048 3324369 D PFAM: PKD domain; InterPro IPR000601:IPR001220; KEGG: msv:Mesil_2801 conserved repeat domain protein; PFAM: PKD; Legume lectin, beta chain; SMART: PKD; SPTR: Cell surface protein; PKD domain-containing protein 3322048..3324369 Cyclobacterium marinum DSM 745 11037892 YP_004774824.1 CDS Cycma_2855 NC_015914.1 3324369 3325394 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: sli:Slin_5231 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 3324369..3325394 Cyclobacterium marinum DSM 745 11037893 YP_004774825.1 CDS Cycma_2856 NC_015914.1 3331284 3332228 R KEGG: gau:GAU_1088 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3331284..3332228) Cyclobacterium marinum DSM 745 11037897 YP_004774826.1 CDS Cycma_2857 NC_015914.1 3332501 3332794 D PFAM: Protein of unknown function (DUF2752); KEGG: psn:Pedsa_3315 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3332501..3332794 Cyclobacterium marinum DSM 745 11037898 YP_004774827.1 CDS Cycma_2858 NC_015914.1 3332779 3333177 D PFAM: TM2 domain; InterPro IPR007829; KEGG: psn:Pedsa_3314 TM2 domain containing protein; SPTR: TM2 domain protein; TM2 domain-containing protein 3332779..3333177 Cyclobacterium marinum DSM 745 11037899 YP_004774828.1 CDS Cycma_2859 NC_015914.1 3333170 3334120 D KEGG: psm:PSM_A3082 lipoprotein, SPTR: uncharacterized protein; hypothetical protein 3333170..3334120 Cyclobacterium marinum DSM 745 11037900 YP_004774829.1 CDS Cycma_2860 NC_015914.1 3334672 3334869 R PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: chu:CHU_2346 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding protein family; cold-shock DNA-binding domain-containing protein complement(3334672..3334869) Cyclobacterium marinum DSM 745 11037901 YP_004774830.1 CDS Cycma_2861 NC_015914.1 3335029 3336066 R PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type; COGs: COG2502 Asparagine synthetase A; HAMAP: Aspartate--ammonia ligase; InterPro IPR004618; KEGG: psn:Pedsa_1836 aspartate-ammonia ligase; PFAM: Aspartate--ammonia ligase; SPTR: Aspartate-ammonia ligase; TIGRFAM: Aspartate--ammonia ligase; aspartate--ammonia ligase complement(3335029..3336066) Cyclobacterium marinum DSM 745 11037902 YP_004774831.1 CDS Cycma_2862 NC_015914.1 3336170 3337297 R PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019405; KEGG: cpi:Cpin_0750 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394; SPTR: 6-phosphogluconolactonase; hypothetical protein complement(3336170..3337297) Cyclobacterium marinum DSM 745 11037903 YP_004774832.1 CDS Cycma_2863 NC_015914.1 3337311 3337706 R PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: gfo:GFO_3559 Na(+)/H(+) antiporter subunit G; PFAM: Na+/H+ antiporter subunit; SPTR: uncharacterized protein; TIGRFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(3337311..3337706) Cyclobacterium marinum DSM 745 11037904 YP_004774833.1 CDS Cycma_2864 NC_015914.1 3337699 3337974 R PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); InterPro IPR007208; KEGG: gfo:GFO_3558 monovalent cation/H+ antiporter subunit F; PFAM: Multiple resistance and pH regulation protein F; SPTR: Monovalent cation/proton antiporter, MrpF/PhaF family protein; multiple resistance and pH regulation protein F complement(3337699..3337974) Cyclobacterium marinum DSM 745 11037905 YP_004774834.1 CDS Cycma_2865 NC_015914.1 3337971 3338450 R PFAM: Na+/H+ ion antiporter subunit; COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: gfo:GFO_3557 monovalent cation/H+ antiporter subunit E; PFAM: cation antiporter; SPTR: Na+/H+ ion antiporter family protein; cation antiporter complement(3337971..3338450) Cyclobacterium marinum DSM 745 11037906 YP_004774835.1 CDS Cycma_2866 NC_015914.1 3338463 3339971 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: gfo:GFO_3556 Na(+)/H(+) antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; SPTR: Na(+)/H(+) antiporter subunit D; NADH/ubiquinone/plastoquinone complement(3338463..3339971) Cyclobacterium marinum DSM 745 11037907 YP_004774836.1 CDS Cycma_2867 NC_015914.1 3339968 3340321 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: zpr:ZPR_4508 monovalent cation/H+ antiporter subunit C; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; SPTR: monovalent cation/H+ antiporter subunit C; NADH-ubiquinone oxidoreductase subunit 4L complement(3339968..3340321) Cyclobacterium marinum DSM 745 11037908 YP_004774837.1 CDS Cycma_2868 NC_015914.1 3340323 3340733 R PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: zpr:ZPR_4509 Na(+)/H(+) antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Na(+)/H(+) antiporter subunit B; Na+/H+ antiporter MnhB subunit-like protein complement(3340323..3340733) Cyclobacterium marinum DSM 745 11037909 YP_004774838.1 CDS Cycma_2869 NC_015914.1 3340736 3343042 R PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001516:IPR001750; KEGG: gfo:GFO_3553 monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; SPTR: Na(+)/H(+) antiporter subunit A; NADH/ubiquinone/plastoquinone complement(3340736..3343042) Cyclobacterium marinum DSM 745 11037910 YP_004774839.1 CDS Cycma_2870 NC_015914.1 3343286 3345838 D PFAM: Phosphoenolpyruvate carboxylase; COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR001449; KEGG: mtt:Ftrac_3278 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; SPTR: uncharacterized protein; phosphoenolpyruvate carboxylase 3343286..3345838 Cyclobacterium marinum DSM 745 11037911 YP_004774840.1 CDS Cycma_2871 NC_015914.1 3346096 3346929 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: cly:Celly_2906 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; fatty acid hydroxylase 3346096..3346929 Cyclobacterium marinum DSM 745 11037912 YP_004774841.1 CDS Cycma_2873 NC_015914.1 3347562 3348212 D PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: cao:Celal_3582 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; alkyl hydroperoxide reductase 3347562..3348212 Cyclobacterium marinum DSM 745 11037914 YP_004774842.1 CDS Cycma_2874 NC_015914.1 3348372 3348650 D KEGG: ran:Riean_1827 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3348372..3348650 Cyclobacterium marinum DSM 745 11037915 YP_004774843.1 CDS Cycma_2875 NC_015914.1 3348650 3349063 D PFAM: PIN domain; InterPro IPR002716; KEGG: ran:Riean_1828 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein; twitching motility protein PilT 3348650..3349063 Cyclobacterium marinum DSM 745 11037916 YP_004774844.1 CDS Cycma_2876 NC_015914.1 3349207 3349623 D hypothetical protein 3349207..3349623 Cyclobacterium marinum DSM 745 11037917 YP_004774845.1 CDS Cycma_2877 NC_015914.1 3349700 3351862 R PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase; COGs: COG1505 Serine protease of the peptidase S9A; InterPro IPR004106:IPR001375; KEGG: cat:CA2559_02385 prolyl endopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Prolyl endopeptidase; peptidase S9A prolyl oligopeptidase domain-containing protein beta-propeller complement(3349700..3351862) Cyclobacterium marinum DSM 745 11037918 YP_004774846.1 CDS Cycma_2878 NC_015914.1 3352098 3353147 D PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro IPR014940; KEGG: pth:PTH_2363 alpha/beta fold family hydrolase; PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; SPTR: Palmitoyl-CoA hydrolase; BAAT/Acyl-CoA thioester hydrolase 3352098..3353147 Cyclobacterium marinum DSM 745 11037919 YP_004774847.1 CDS Cycma_2879 NC_015914.1 3353353 3353622 D PFAM: Protein of unknown function (DUF2805); TIGRFAM: TIGR03643 family protein; InterPro IPR019882; KEGG: cao:Celal_3494 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03643; hypothetical protein 3353353..3353622 Cyclobacterium marinum DSM 745 11037920 YP_004774848.1 CDS Cycma_2880 NC_015914.1 3353619 3354710 D PFAM: FAD binding domain of DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: cly:Celly_0728 DNA photolyase FAD-binding protein; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: Deoxyribodipyrimidine photolyase; manually curated; DNA photolyase FAD-binding protein 3353619..3354710 Cyclobacterium marinum DSM 745 11037921 YP_004774849.1 CDS Cycma_2881 NC_015914.1 3354707 3354850 D PFAM: Uncharacterized protein conserved in bacteria (DUF2256); InterPro IPR017136; KEGG: cly:Celly_0726 hypothetical protein; PFAM: Uncharacterised conserved protein UCP037205; SPTR: uncharacterized protein; manually curated; hypothetical protein 3354707..3354850 Cyclobacterium marinum DSM 745 11037922 YP_004774850.1 CDS Cycma_2882 NC_015914.1 3354837 3356327 D PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; COGs: COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; InterPro IPR007357:IPR005101; KEGG: cly:Celly_0725 deoxyribodipyrimidine photolyase-like protein; PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: Photolyase; deoxyribodipyrimidine photolyase-like protein 3354837..3356327 Cyclobacterium marinum DSM 745 11037923 YP_004774851.1 CDS Cycma_2883 NC_015914.1 3356479 3356658 D hypothetical protein 3356479..3356658 Cyclobacterium marinum DSM 745 11037924 YP_004774852.1 CDS Cycma_2885 NC_015914.1 3360025 3360333 D hypothetical protein 3360025..3360333 Cyclobacterium marinum DSM 745 11037926 YP_004774853.1 CDS Cycma_2886 NC_015914.1 3360634 3361494 D PFAM: Prolyl oligopeptidase; Carboxylesterase; COGs: COG0657 Esterase/lipase; InterPro IPR002018; KEGG: Carboxylesterase type B; PFAM: Carboxylesterase, type B; SPTR: Carboxylesterase type B; carboxylesterase type B 3360634..3361494 Cyclobacterium marinum DSM 745 11037927 YP_004774854.1 CDS Cycma_2887 NC_015914.1 3361623 3362759 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase complement(3361623..3362759) Cyclobacterium marinum DSM 745 11037928 YP_004774855.1 CDS Cycma_2888 NC_015914.1 3363211 3364518 D PFAM: Subtilase; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: mno:Mnod_8803 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 3363211..3364518 Cyclobacterium marinum DSM 745 11037929 YP_004774856.1 CDS Cycma_2889 NC_015914.1 3364530 3364757 D hypothetical protein 3364530..3364757 Cyclobacterium marinum DSM 745 11037930 YP_004774857.1 CDS Cycma_2890 NC_015914.1 3364859 3365704 R PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fjo:Fjoh_2128 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel protein; mechanosensitive ion channel protein MscS complement(3364859..3365704) Cyclobacterium marinum DSM 745 11037931 YP_004774858.1 CDS Cycma_2891 NC_015914.1 3366140 3367429 D PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: phe:Phep_2806 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: uncharacterized protein; hypothetical protein 3366140..3367429 Cyclobacterium marinum DSM 745 11037932 YP_004774859.1 CDS Cycma_2892 NC_015914.1 3367474 3368598 D PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family; InterPro IPR012669; KEGG: fjo:Fjoh_4248 pectate lyase; PFAM: Pectic acid lyase; SPTR: Pectate lyase; TIGRFAM: Pectic acid lyase; pectate lyase 3367474..3368598 Cyclobacterium marinum DSM 745 11037933 YP_004774860.1 CDS Cycma_2893 NC_015914.1 3368750 3370135 D KEGG: rba:RB5312 pectate lyase; SPTR: Pectate lyase; pectate lyase 3368750..3370135 Cyclobacterium marinum DSM 745 11037934 YP_004774861.1 CDS Cycma_2894 NC_015914.1 3370139 3372211 D PFAM: glycosyl hydrolase of unknown function (DUF1680); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: shg:Sph21_2347 protein of unknown function DUF1680; PFAM: Protein of unknown function DUF1680; SPTR: uncharacterized protein; hypothetical protein 3370139..3372211 Cyclobacterium marinum DSM 745 11037935 YP_004774862.1 CDS Cycma_2895 NC_015914.1 3372378 3373040 D KEGG: rbi:RB2501_03935 chitinase; SPTR: Chitinase; chitinase 3372378..3373040 Cyclobacterium marinum DSM 745 11037936 YP_004774863.1 CDS Cycma_2896 NC_015914.1 3373053 3373793 R KEGG: gfo:GFO_1926 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3373053..3373793) Cyclobacterium marinum DSM 745 11037937 YP_004774864.1 CDS Cycma_2897 NC_015914.1 3374349 3375872 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1509 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulphatase A; sulfatase 3374349..3375872 Cyclobacterium marinum DSM 745 11037938 YP_004774865.1 CDS Cycma_2898 NC_015914.1 3376039 3376644 R KEGG: cdf:CD0640 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3376039..3376644) Cyclobacterium marinum DSM 745 11037939 YP_004774866.1 CDS Cycma_2899 NC_015914.1 3376741 3378840 R KEGG: pbs:Plabr_3546 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3376741..3378840) Cyclobacterium marinum DSM 745 11037940 YP_004774867.1 CDS Cycma_2900 NC_015914.1 3378881 3380428 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psn:Pedsa_1812 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase complement(3378881..3380428) Cyclobacterium marinum DSM 745 11037941 YP_004774868.1 CDS Cycma_2901 NC_015914.1 3380425 3381915 R PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_6635 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(3380425..3381915) Cyclobacterium marinum DSM 745 11037942 YP_004774869.1 CDS Cycma_2902 NC_015914.1 3381935 3385099 R PFAM: TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2273 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(3381935..3385099) Cyclobacterium marinum DSM 745 11037943 YP_004774870.1 CDS Cycma_2903 NC_015914.1 3385558 3386721 D KEGG: shg:Sph21_1826 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3385558..3386721 Cyclobacterium marinum DSM 745 11037944 YP_004774871.1 CDS Cycma_2904 NC_015914.1 3387368 3388630 D TIGRFAM: DNA modification/repair radical SAM protein; COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR007197; KEGG: cly:Celly_2902 radical SAM domain-containing protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; radical SAM domain-containing protein 3387368..3388630 Cyclobacterium marinum DSM 745 11037945 YP_004774872.1 CDS Cycma_2905 NC_015914.1 3388631 3389404 D TIGRFAM: probable DNA metabolism protein; KEGG: cly:Celly_2901 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3388631..3389404 Cyclobacterium marinum DSM 745 11037946 YP_004774873.1 CDS Cycma_2906 NC_015914.1 3390118 3390699 D SPTR: uncharacterized protein; hypothetical protein 3390118..3390699 Cyclobacterium marinum DSM 745 11037947 YP_004774874.1 CDS Cycma_2907 NC_015914.1 3390932 3391486 R hypothetical protein complement(3390932..3391486) Cyclobacterium marinum DSM 745 11037948 YP_004774875.1 CDS Cycma_2908 NC_015914.1 3391999 3392418 D KEGG: cly:Celly_1505 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3391999..3392418 Cyclobacterium marinum DSM 745 11037949 YP_004774876.1 CDS Cycma_2909 NC_015914.1 3392607 3392972 D hypothetical protein 3392607..3392972 Cyclobacterium marinum DSM 745 11037950 YP_004774877.1 CDS Cycma_2910 NC_015914.1 3393520 3394011 D PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: cpy:Cphy_3594 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3393520..3394011 Cyclobacterium marinum DSM 745 11037951 YP_004774878.1 CDS Cycma_2911 NC_015914.1 3393995 3394321 D SPTR: uncharacterized protein; hypothetical protein 3393995..3394321 Cyclobacterium marinum DSM 745 11037952 YP_004774879.1 CDS Cycma_2912 NC_015914.1 3394430 3395131 D KEGG: lby:Lbys_1904 peptidase M56 blar1; SPTR: TonB-dependent receptor; hypothetical protein 3394430..3395131 Cyclobacterium marinum DSM 745 11037953 YP_004774880.1 CDS Cycma_2913 NC_015914.1 3395696 3395905 D hypothetical protein 3395696..3395905 Cyclobacterium marinum DSM 745 11037954 YP_004774881.1 CDS Cycma_2914 NC_015914.1 3395994 3396689 D SPTR: uncharacterized protein; hypothetical protein 3395994..3396689 Cyclobacterium marinum DSM 745 11037955 YP_004774882.1 CDS Cycma_2916 NC_015914.1 3398313 3399269 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: mtt:Ftrac_1705 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: ribonuclease BN; TIGRFAM: Ribonuclease BN; ribonuclease BN complement(3398313..3399269) Cyclobacterium marinum DSM 745 11037958 YP_004774883.1 CDS Cycma_2917 NC_015914.1 3399266 3399682 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; InterPro IPR006684:IPR006683; KEGG: psn:Pedsa_1080 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase complement(3399266..3399682) Cyclobacterium marinum DSM 745 11037959 YP_004774884.1 CDS Cycma_2918 NC_015914.1 3399683 3400732 R PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: mtt:Ftrac_1707 aminodeoxychorismate lyase; PFAM: Uncharacterised protein family YceG-like; SPTR: Aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; aminodeoxychorismate lyase complement(3399683..3400732) Cyclobacterium marinum DSM 745 11037960 YP_004774885.1 CDS Cycma_2919 NC_015914.1 3400953 3401582 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: psn:Pedsa_0384 SUA5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 3400953..3401582 Cyclobacterium marinum DSM 745 11037961 YP_004774886.1 CDS Cycma_2920 NC_015914.1 3401646 3402275 D PFAM: WbqC-like protein family; InterPro IPR014985; KEGG: mtt:Ftrac_1709 wbqc-like family protein; PFAM: WbqC-like protein family; SPTR: uncharacterized protein; WbqC-like family protein 3401646..3402275 Cyclobacterium marinum DSM 745 11037962 YP_004774887.1 CDS Cycma_2921 NC_015914.1 3402366 3404891 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489; KEGG: chu:CHU_1079 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Negative regulator of genetic competence ClpC/MecB; ATPase AAA 3402366..3404891 Cyclobacterium marinum DSM 745 11037963 YP_004774888.1 CDS Cycma_2922 NC_015914.1 3405096 3406025 D KEGG: cpi:Cpin_1731 hypothetical protein; SPTR: integral membrane protein; hypothetical protein 3405096..3406025 Cyclobacterium marinum DSM 745 11037964 YP_004774889.1 CDS Cycma_2923 NC_015914.1 3406218 3407564 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: sli:Slin_0603 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 3406218..3407564 Cyclobacterium marinum DSM 745 11037965 YP_004774890.1 CDS Cycma_2924 NC_015914.1 3407596 3408888 D KEGG: sli:Slin_0601 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3407596..3408888 Cyclobacterium marinum DSM 745 11037966 YP_004774891.1 CDS Cycma_2925 NC_015914.1 3408929 3411211 R PFAM: Glycosyl hydrolase 92; TIGRFAM: alpha-1,2-mannosidase, COGs: COG3537 alpha-1 2-mannosidase; InterPro IPR005887:IPR012939; KEGG: fjo:Fjoh_3125 alpha-1,2-mannosidase; PFAM: Glycosyl hydrolase 92; SPTR: alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase; alpha-1,2-mannosidase complement(3408929..3411211) Cyclobacterium marinum DSM 745 11037967 YP_004774892.1 CDS Cycma_2926 NC_015914.1 3411220 3412239 R PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR001509; KEGG: lby:Lbys_1312 udp-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(3411220..3412239) Cyclobacterium marinum DSM 745 11037968 YP_004774893.1 CDS Cycma_2927 NC_015914.1 3412643 3412837 D PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: sli:Slin_0097 ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; 30S ribosomal protein S21 3412643..3412837 Cyclobacterium marinum DSM 745 11037969 YP_004774894.1 CDS Cycma_2928 NC_015914.1 3412895 3413779 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: chu:CHU_3398 integrase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 1; tyrosine recombinase XerC 3412895..3413779 Cyclobacterium marinum DSM 745 11037970 YP_004774895.1 CDS Cycma_2929 NC_015914.1 3413811 3414116 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; InterPro IPR003489; KEGG: mtt:Ftrac_2412 sigma 54 modulation protein/ribosomal protein s30ea; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: Site-specific recombinase, phage integrase/ribosomal subunit interface protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; ribosomal subunit interface protein 3413811..3414116 Cyclobacterium marinum DSM 745 11037971 YP_004774896.1 CDS Cycma_2930 NC_015914.1 3414175 3415827 R PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: dte:Dester_0127 glycosyl transferase 39; PFAM: Glycosyl transferase, family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase; glycosyl transferase family protein complement(3414175..3415827) Cyclobacterium marinum DSM 745 11037972 YP_004774897.1 CDS Cycma_2931 NC_015914.1 3416118 3417212 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: sli:Slin_2554 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Glucose-fructose oxidoreductase; oxidoreductase domain-containing protein complement(3416118..3417212) Cyclobacterium marinum DSM 745 11037973 YP_004774898.1 CDS Cycma_2932 NC_015914.1 3417540 3418493 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: nis:NIS_1112 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glyoxalase; family 2 glycosyl transferase 3417540..3418493 Cyclobacterium marinum DSM 745 11037974 YP_004774899.1 CDS Cycma_2933 NC_015914.1 3418474 3419322 D PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: nis:NIS_1113 hypothetical protein; SPTR: Membrane protein; hypothetical protein 3418474..3419322 Cyclobacterium marinum DSM 745 11037975 YP_004774900.1 CDS Cycma_2934 NC_015914.1 3419506 3420201 R SPTR: uncharacterized protein; hypothetical protein complement(3419506..3420201) Cyclobacterium marinum DSM 745 11037976 YP_004774901.1 CDS Cycma_2935 NC_015914.1 3420423 3421253 R PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; COGs: COG0264 Translation elongation factor Ts; HAMAP: Elongation factor Ts; InterPro IPR001816:IPR000449:IPR014039; KEGG: mtt:Ftrac_3365 translation elongation factor ts (ef-ts); PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; elongation factor Ts complement(3420423..3421253) Cyclobacterium marinum DSM 745 11037977 YP_004774902.1 CDS Cycma_2936 NC_015914.1 3421362 3422123 R PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865; KEGG: chu:CHU_3037 30S ribosomal subunit protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; 30S ribosomal protein S2 complement(3421362..3422123) Cyclobacterium marinum DSM 745 11037978 YP_004774903.1 CDS Cycma_2937 NC_015914.1 3422168 3422554 R PFAM: Ribosomal protein S9/S16; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: lby:Lbys_2853 ssu ribosomal protein s9p; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; 30S ribosomal protein S9 complement(3422168..3422554) Cyclobacterium marinum DSM 745 11037979 YP_004774904.1 CDS Cycma_2938 NC_015914.1 3422567 3423010 R PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; COGs: COG0102 Ribosomal protein L13; InterPro IPR005823:IPR005822; KEGG: sli:Slin_4741 ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; 50S ribosomal protein L13 complement(3422567..3423010) Cyclobacterium marinum DSM 745 11037980 YP_004774905.1 CDS Cycma_2939 NC_015914.1 3423400 3423798 R PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: fjo:Fjoh_2193 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: GreA/GreB family elongation factor; GreA/GreB family elongation factor complement(3423400..3423798) Cyclobacterium marinum DSM 745 11037981 YP_004774906.1 CDS Cycma_2940 NC_015914.1 3424519 3425808 D KEGG: dfe:Dfer_3262 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3424519..3425808 Cyclobacterium marinum DSM 745 11037982 YP_004774907.1 CDS Cycma_2941 NC_015914.1 3425875 3427116 D PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: cao:Celal_2821 natural resistance-associated macrophage protein; SPTR: uncharacterized protein; natural resistance-associated macrophage protein 3425875..3427116 Cyclobacterium marinum DSM 745 11037983 YP_004774908.1 CDS Cycma_2942 NC_015914.1 3427249 3428475 D PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase 3427249..3428475 Cyclobacterium marinum DSM 745 11037984 YP_004774909.1 CDS Cycma_2943 NC_015914.1 3428769 3430121 D PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329 transposase; SPTR: transposase; transposase 3428769..3430121 Cyclobacterium marinum DSM 745 11037985 YP_004774910.1 CDS Cycma_2944 NC_015914.1 3430374 3431873 R PFAM: C4-dicarboxylate anaerobic carrier; COGs: COG1288 membrane protein; InterPro IPR018385; KEGG: cao:Celal_1607 C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic carrier-like; SPTR: C4-dicarboxylate anaerobic carrier; C4-dicarboxylate anaerobic carrier-like protein complement(3430374..3431873) Cyclobacterium marinum DSM 745 11037986 YP_004774911.1 CDS Cycma_2945 NC_015914.1 3431870 3432238 R PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: lbf:LBF_3228 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; hypothetical protein complement(3431870..3432238) Cyclobacterium marinum DSM 745 11037987 YP_004774912.1 CDS Cycma_2947 NC_015914.1 3432840 3433286 R KEGG: psl:Psta_1669 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3432840..3433286) Cyclobacterium marinum DSM 745 11037989 YP_004774913.1 CDS Cycma_2948 NC_015914.1 3433339 3433488 D hypothetical protein 3433339..3433488 Cyclobacterium marinum DSM 745 11037990 YP_004774914.1 CDS Cycma_2949 NC_015914.1 3433497 3435878 R KEGG: extracellular metal-dependent peptidase; SPTR: uncharacterized protein; extracellular metal-dependent peptidase complement(3433497..3435878) Cyclobacterium marinum DSM 745 11037991 YP_004774915.1 CDS Cycma_2950 NC_015914.1 3436247 3437191 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: Soluble epoxide hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Soluble epoxide hydrolase; alpha/beta hydrolase complement(3436247..3437191) Cyclobacterium marinum DSM 745 11037992 YP_004774916.1 CDS Cycma_2954 NC_015914.1 3438971 3442012 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1488 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 3438971..3442012 Cyclobacterium marinum DSM 745 11037996 YP_004774917.1 CDS Cycma_2955 NC_015914.1 3442044 3443735 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1487 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 3442044..3443735 Cyclobacterium marinum DSM 745 11037997 YP_004774918.1 CDS Cycma_2956 NC_015914.1 3443828 3445258 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: phe:Phep_0775 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 3443828..3445258 Cyclobacterium marinum DSM 745 11037998 YP_004774919.1 CDS Cycma_2957 NC_015914.1 3445288 3447360 D PFAM: Acetyl xylan esterase (AXE1); COGs: COG0412 Dienelactone hydrolase; InterPro IPR008391; KEGG: shg:Sph21_0373 acetyl xylan esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl xylan esterase superfamily protein; acetyl xylan esterase 3445288..3447360 Cyclobacterium marinum DSM 745 11037999 YP_004774920.1 CDS Cycma_2958 NC_015914.1 3447400 3448743 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683:IPR004104; KEGG: lby:Lbys_1950 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold domain protein; oxidoreductase domain-containing protein 3447400..3448743 Cyclobacterium marinum DSM 745 11038000 YP_004774921.1 CDS Cycma_2959 NC_015914.1 3448802 3450148 D PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR006311:IPR008257; KEGG: tro:trd_1717 glutamine amidotransferase, class II/dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: uncharacterized protein; peptidase M19 3448802..3450148 Cyclobacterium marinum DSM 745 11038001 YP_004774922.1 CDS Cycma_2960 NC_015914.1 3450301 3451047 D PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: phe:Phep_0774 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine/galactosamine-6-phosphate isomerase; glucosamine/galactosamine-6-phosphate isomerase 3450301..3451047 Cyclobacterium marinum DSM 745 11038002 YP_004774923.1 CDS Cycma_2961 NC_015914.1 3451179 3452216 R PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: shg:Sph21_0370 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator complement(3451179..3452216) Cyclobacterium marinum DSM 745 11038003 YP_004774924.1 CDS Cycma_2962 NC_015914.1 3452942 3453637 D PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: dfe:Dfer_5734 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3452942..3453637 Cyclobacterium marinum DSM 745 11038004 YP_004774925.1 CDS Cycma_2963 NC_015914.1 3453783 3454817 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: sli:Slin_3389 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 3453783..3454817 Cyclobacterium marinum DSM 745 11038005 YP_004774926.1 CDS Cycma_2964 NC_015914.1 3455066 3458500 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910; KEGG: sli:Slin_3960 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 3455066..3458500 Cyclobacterium marinum DSM 745 11038006 YP_004774927.1 CDS Cycma_2965 NC_015914.1 3458551 3460128 D KEGG: shg:Sph21_2957 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3458551..3460128 Cyclobacterium marinum DSM 745 11038007 YP_004774928.1 CDS Cycma_2966 NC_015914.1 3460422 3462269 D PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR005674:IPR000383:IPR013736; KEGG: dfe:Dfer_2454 X-Pro dipeptidyl-peptidase domain protein; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15; SPTR: X-Pro dipeptidyl-peptidase domain protein; TIGRFAM: CocE/NonD hydrolase; hydrolase 3460422..3462269 Cyclobacterium marinum DSM 745 11038008 YP_004774929.1 CDS Cycma_2967 NC_015914.1 3462514 3463065 D PFAM: Endoribonuclease L-PSP; COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: fbc:FB2170_04510 transcription regulator; PFAM: Endoribonuclease L-PSP; SPTR: Transcription regulator; endoribonuclease L-PSP 3462514..3463065 Cyclobacterium marinum DSM 745 11038009 YP_004774930.1 CDS Cycma_2968 NC_015914.1 3463109 3464248 D PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; bile acid:sodium symporter 3463109..3464248 Cyclobacterium marinum DSM 745 11038010 YP_004774931.1 CDS Cycma_2969 NC_015914.1 3464360 3466159 D PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: sti:Sthe_1347 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltranspeptidase; TIGRFAM: Gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3464360..3466159 Cyclobacterium marinum DSM 745 11038011 YP_004774932.1 CDS Cycma_2970 NC_015914.1 3466311 3467672 D InterPro IPR006311; KEGG: sus:Acid_6156 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3466311..3467672 Cyclobacterium marinum DSM 745 11038012 YP_004774933.1 CDS Cycma_2971 NC_015914.1 3468105 3469802 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_09500 sulfatase; PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); sulfatase 3468105..3469802 Cyclobacterium marinum DSM 745 11038013 YP_004774934.1 CDS Cycma_2972 NC_015914.1 3469832 3470086 D hypothetical protein 3469832..3470086 Cyclobacterium marinum DSM 745 11038014 YP_004774935.1 CDS Cycma_2973 NC_015914.1 3470268 3470648 D PFAM: Protein of unknown function (DUF1696); InterPro IPR012544; KEGG: cpi:Cpin_2100 hypothetical protein; PFAM: Protein of unknown function DUF1696; SPTR: uncharacterized protein; hypothetical protein 3470268..3470648 Cyclobacterium marinum DSM 745 11038015 YP_004774936.1 CDS Cycma_2974 NC_015914.1 3470750 3472201 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4312 cerebroside-sulfatase; PFAM: Sulfatase; SPTR: Arylsulphatase A; sulfatase 3470750..3472201 Cyclobacterium marinum DSM 745 11038016 YP_004774937.1 CDS Cycma_2975 NC_015914.1 3472454 3474541 D PFAM: esterase; InterPro IPR000801; KEGG: dfe:Dfer_1714 esterase; PFAM: esterase; SPTR: esterase; esterase 3472454..3474541 Cyclobacterium marinum DSM 745 11038017 YP_004774938.1 CDS Cycma_2976 NC_015914.1 3474754 3478236 D TIGRFAM: YD repeat (two copies); InterPro IPR006530; KEGG: phe:Phep_1097 YD repeat-containing protein; SPTR: YD repeat protein; TIGRFAM: YD repeat; hypothetical protein 3474754..3478236 Cyclobacterium marinum DSM 745 11038018 YP_004774939.1 CDS Cycma_2977 NC_015914.1 3478248 3478706 D hypothetical protein 3478248..3478706 Cyclobacterium marinum DSM 745 11038019 YP_004774940.1 CDS Cycma_2978 NC_015914.1 3478703 3483265 D TIGRFAM: RHS repeat-associated core domain; InterPro IPR006530; KEGG: cpi:Cpin_7099 hypothetical protein; SPTR: YD repeat protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat; RHS repeat-associated core domain-containing protein 3478703..3483265 Cyclobacterium marinum DSM 745 11038020 YP_004774941.1 CDS Cycma_2979 NC_015914.1 3483258 3483962 D hypothetical protein 3483258..3483962 Cyclobacterium marinum DSM 745 11038021 YP_004774942.1 CDS Cycma_2980 NC_015914.1 3484377 3485108 R PFAM: IstB-like ATP binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: plt:Plut_1831 ATPase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: ATPase; IstB domain-containing protein ATP-binding protein complement(3484377..3485108) Cyclobacterium marinum DSM 745 11038022 YP_004774943.1 CDS Cycma_2982 NC_015914.1 3486948 3487316 D hypothetical protein 3486948..3487316 Cyclobacterium marinum DSM 745 11038024 YP_004774944.1 CDS Cycma_2983 NC_015914.1 3487328 3487717 D hypothetical protein 3487328..3487717 Cyclobacterium marinum DSM 745 11038025 YP_004774945.1 CDS Cycma_2984 NC_015914.1 3488186 3488671 D hypothetical protein 3488186..3488671 Cyclobacterium marinum DSM 745 11038026 YP_004774946.1 CDS Cycma_2985 NC_015914.1 3488634 3489140 D hypothetical protein 3488634..3489140 Cyclobacterium marinum DSM 745 11038027 YP_004774947.1 CDS Cycma_2986 NC_015914.1 3489137 3489544 D hypothetical protein 3489137..3489544 Cyclobacterium marinum DSM 745 11038028 YP_004774948.1 CDS Cycma_2988 NC_015914.1 3490022 3490372 D hypothetical protein 3490022..3490372 Cyclobacterium marinum DSM 745 11038030 YP_004774949.1 CDS Cycma_2989 NC_015914.1 3490845 3492131 R KEGG: psn:Pedsa_0287 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3490845..3492131) Cyclobacterium marinum DSM 745 11038031 YP_004774950.1 CDS Cycma_2990 NC_015914.1 3492220 3492507 R hypothetical protein complement(3492220..3492507) Cyclobacterium marinum DSM 745 11038032 YP_004774951.1 CDS Cycma_2991 NC_015914.1 3493292 3494578 R KEGG: zpr:ZPR_2242 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3493292..3494578) Cyclobacterium marinum DSM 745 11038033 YP_004774952.1 CDS Cycma_2992 NC_015914.1 3495017 3495265 D PFAM: addiction module component; TIGRFAM: addiction module component, TIGR02574 family; InterPro IPR013406; PFAM: Addiction module component, CHP02574; addiction module family protein 3495017..3495265 Cyclobacterium marinum DSM 745 11038034 YP_004774953.1 CDS Cycma_2993 NC_015914.1 3495262 3495549 D PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: gsu:GSU0055 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: uncharacterized protein; plasmid stabilization system 3495262..3495549 Cyclobacterium marinum DSM 745 11038035 YP_004774954.1 CDS Cycma_2994 NC_015914.1 3496412 3498931 D PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: cly:Celly_2415 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat family protein; hypothetical protein 3496412..3498931 Cyclobacterium marinum DSM 745 11038036 YP_004774955.1 CDS Cycma_2996 NC_015914.1 3499688 3499816 R hypothetical protein complement(3499688..3499816) Cyclobacterium marinum DSM 745 11038038 YP_004774956.1 CDS Cycma_2997 NC_015914.1 3500010 3503126 D PFAM: GAF domain; PAS fold; TIGRFAM: PAS domain S-box; InterProIPR000014:IPR001610:IPR003018:IPR013655:IPR 013767; KEGG: cts:Ctha_0021 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; GAF; PAS fold; SMART: GAF; PAS; PAC motif; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS sensor protein 3500010..3503126 Cyclobacterium marinum DSM 745 11038039 YP_004774957.1 CDS Cycma_2998 NC_015914.1 3503312 3503566 R KEGG: fbc:FB2170_16316 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3503312..3503566) Cyclobacterium marinum DSM 745 11038040 YP_004774958.1 CDS Cycma_2999 NC_015914.1 3503665 3505011 R COGs: COG0786 Na+/glutamate symporter; InterPro IPR004445; KEGG: tel:tlr1046 hypothetical protein; PFAM: Sodium/glutamate symporter; SPTR: Tlr1046 protein; sodium/glutamate symporter complement(3503665..3505011) Cyclobacterium marinum DSM 745 11038041 YP_004774959.1 CDS Cycma_3000 NC_015914.1 3505519 3506391 R PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; KEGG: cpi:Cpin_5554 xylanase; SPTR: Xylanase; xylanase complement(3505519..3506391) Cyclobacterium marinum DSM 745 11038042 YP_004774960.1 CDS Cycma_3001 NC_015914.1 3506746 3509247 R PFAM: Protein of unknown function (DUF2569); InterPro IPR002931:IPR019690; KEGG: zpr:ZPR_3638 transglutaminase-like enzyme; PFAM: Protein of unknown function DUF2569; Transglutaminase-like; SPTR: uncharacterized protein; hypothetical protein complement(3506746..3509247) Cyclobacterium marinum DSM 745 11038043 YP_004774961.1 CDS Cycma_3002 NC_015914.1 3509515 3509931 R KEGG: ppn:Palpr_1379 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3509515..3509931) Cyclobacterium marinum DSM 745 11038044 YP_004774962.1 CDS Cycma_3003 NC_015914.1 3510223 3511620 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216 arylsulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfate sulfatase (GALNS); sulfatase 3510223..3511620 Cyclobacterium marinum DSM 745 11038045 YP_004774963.1 CDS Cycma_3004 NC_015914.1 3511621 3511731 D hypothetical protein 3511621..3511731 Cyclobacterium marinum DSM 745 11038046 YP_004774964.1 CDS Cycma_3005 NC_015914.1 3511827 3512006 D KEGG: sus:Acid_2744 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 3511827..3512006 Cyclobacterium marinum DSM 745 11038047 YP_004774965.1 CDS Cycma_3006 NC_015914.1 3512007 3513443 R PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cly:Celly_0750 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter; Na+/solute symporter complement(3512007..3513443) Cyclobacterium marinum DSM 745 11038048 YP_004774966.1 CDS Cycma_3007 NC_015914.1 3513559 3516576 D PFAM: Glycosyl hydrolase 3 N terminal domain; Beta-lactamase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: zpr:ZPR_4696 beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; SPTR: Beta-N-acetylglucosaminidase; glycoside hydrolase 3513559..3516576 Cyclobacterium marinum DSM 745 11038049 YP_004774967.1 CDS Cycma_3008 NC_015914.1 3516766 3517173 R PFAM: Response regulator receiver domain; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789; KEGG: zpr:ZPR_1891 response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator; response regulator receiver protein complement(3516766..3517173) Cyclobacterium marinum DSM 745 11038050 YP_004774968.1 CDS Cycma_3009 NC_015914.1 3517624 3518046 D PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: rba:RB5657 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SPTR: uncharacterized protein; stress responsive alpha-beta barrel domain-containing protein 3517624..3518046 Cyclobacterium marinum DSM 745 11038051 YP_004774969.1 CDS Cycma_3010 NC_015914.1 3518178 3518471 R PFAM: Domain of unknown function DUF77; COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: cpi:Cpin_3718 hypothetical protein; PFAM: Protein of unknown function DUF77; SPTR: uncharacterized protein; hypothetical protein complement(3518178..3518471) Cyclobacterium marinum DSM 745 11038052 YP_004774970.1 CDS Cycma_3011 NC_015914.1 3518476 3519036 R PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: mtt:Ftrac_0555 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(3518476..3519036) Cyclobacterium marinum DSM 745 11038053 YP_004774971.1 CDS Cycma_3012 NC_015914.1 3519317 3519907 R PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; HAMAP: Ribosomal protein L25; InterPro IPR001021; KEGG: sli:Slin_2924 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25; 50S ribosomal protein L25 complement(3519317..3519907) Cyclobacterium marinum DSM 745 11038054 YP_004774972.1 CDS Cycma_3013 NC_015914.1 3519937 3520863 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: dfe:Dfer_0421 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; ribose-phosphate pyrophosphokinase complement(3519937..3520863) Cyclobacterium marinum DSM 745 11038055 YP_004774973.1 CDS Cycma_3014 NC_015914.1 3520990 3524988 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003018:IPR001610:IPR003661:IPR 003594:IPR001789:IPR013767:IPR013656:IPR013655; KEGG: sli:Slin_0621 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; PAS fold-4; GAF; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; PAS; PAC motif; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; multi-sensor hybrid histidine kinase complement(3520990..3524988) Cyclobacterium marinum DSM 745 11038056 YP_004774974.1 CDS Cycma_3015 NC_015914.1 3525487 3526290 D PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: dfe:Dfer_2702 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein 3525487..3526290 Cyclobacterium marinum DSM 745 11038057 YP_004774975.1 CDS Cycma_3016 NC_015914.1 3526508 3527470 D PFAM: Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR011583:IPR001223; KEGG: fjo:Fjoh_4175 glycoside hydrolase; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II; SPTR: Chitinase; glycoside hydrolase 3526508..3527470 Cyclobacterium marinum DSM 745 11038058 YP_004774976.1 CDS Cycma_3017 NC_015914.1 3527501 3528445 D PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3527501..3528445 Cyclobacterium marinum DSM 745 11038059 YP_004774977.1 CDS Cycma_3018 NC_015914.1 3528451 3528879 D PFAM: NUDIX domain; InterPro IPR000086; KEGG: lic:LIC20067 MutT-like protein; PFAM: NUDIX hydrolase domain; SPTR: Protein containing NUDIX hydrolase, core domain; NUDIX hydrolase 3528451..3528879 Cyclobacterium marinum DSM 745 11038060 YP_004774978.1 CDS Cycma_3019 NC_015914.1 3529235 3530533 D PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR006311:IPR000192; KEGG: dfe:Dfer_3047 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aminotransferase class V; class V aminotransferase 3529235..3530533 Cyclobacterium marinum DSM 745 11038061 YP_004774979.1 CDS Cycma_3020 NC_015914.1 3530886 3532772 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003661:IPR003594; KEGG: mtt:Ftrac_0126 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide repeat; SPTR: sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; ATP-binding protein 3530886..3532772 Cyclobacterium marinum DSM 745 11038062 YP_004774980.1 CDS Cycma_3021 NC_015914.1 3532918 3534135 R PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: fba:FIC_00447 4-hydroxybutyrate coenzyme A transferase; PFAM: Acetyl-CoA hydrolase/transferase; SPTR: 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase complement(3532918..3534135) Cyclobacterium marinum DSM 745 11038063 YP_004774981.1 CDS Cycma_3022 NC_015914.1 3534631 3535047 D PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: mtt:Ftrac_3406 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; OsmC family protein 3534631..3535047 Cyclobacterium marinum DSM 745 11038064 YP_004774982.1 CDS Cycma_3023 NC_015914.1 3535044 3535283 D KEGG: mtt:Ftrac_0956 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3535044..3535283 Cyclobacterium marinum DSM 745 11038065 YP_004774983.1 CDS Cycma_3024 NC_015914.1 3535600 3535803 D hypothetical protein 3535600..3535803 Cyclobacterium marinum DSM 745 11038066 YP_004774984.1 CDS Cycma_3025 NC_015914.1 3535892 3538792 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003661:IPR003594:IPR001789:IPR 013767:IPR013656; KEGG: signal transduction histidine-protein kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; PAS fold-4; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; SPTR: Sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS; multi-sensor hybrid histidine kinase 3535892..3538792 Cyclobacterium marinum DSM 745 11038067 YP_004774985.1 CDS Cycma_3026 NC_015914.1 3538785 3540050 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: mtt:Ftrac_0524 catalytic domain-containing protein of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; hypothetical protein complement(3538785..3540050) Cyclobacterium marinum DSM 745 11038068 YP_004774986.1 CDS Cycma_3027 NC_015914.1 3540135 3541394 R PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR020817:IPR008136:IPR001453; KEGG: mtt:Ftrac_0526 competence/damage-inducible protein CinA; PFAM: CinA, C-terminal; Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; Molybdenum cofactor synthesis; CinA, C-terminal; competence/damage-inducible protein CinA complement(3540135..3541394) Cyclobacterium marinum DSM 745 11038069 YP_004774987.1 CDS Cycma_3028 NC_015914.1 3541487 3541990 R PFAM: Dihydrofolate reductase; COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796; KEGG: cly:Celly_1950 dihydrofolate reductase region; PFAM: Dihydrofolate reductase region; SPTR: Dihydrofolate reductase; dihydrofolate reductase subunit complement(3541487..3541990) Cyclobacterium marinum DSM 745 11038070 YP_004774988.1 CDS Cycma_3029 NC_015914.1 3542016 3542975 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3542016..3542975) Cyclobacterium marinum DSM 745 11038071 YP_004774989.1 CDS Cycma_3030 NC_015914.1 3543057 3543980 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_3220 UspA domain-containing protein; PFAM: UspA; SPTR: universal stress protein; UspA domain-containing protein complement(3543057..3543980) Cyclobacterium marinum DSM 745 11038072 YP_004774990.1 CDS Cycma_3031 NC_015914.1 3544453 3546345 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; D-3-phosphoglycerate dehydrogenase; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912; KEGG: zpr:ZPR_2876 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; SPTR: D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(3544453..3546345) Cyclobacterium marinum DSM 745 11038073 YP_004774991.1 CDS Cycma_3032 NC_015914.1 3546605 3546808 D KEGG: chu:CHU_1801 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3546605..3546808 Cyclobacterium marinum DSM 745 11038074 YP_004774992.1 CDS Cycma_3033 NC_015914.1 3546820 3547215 D KEGG: psn:Pedsa_3817 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3546820..3547215 Cyclobacterium marinum DSM 745 11038075 YP_004774993.1 CDS Cycma_3034 NC_015914.1 3547332 3548006 D PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: fbc:FB2170_07659 hypothetical protein; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: transcriptional regulator, TetR family; TetR family transcriptional regulator 3547332..3548006 Cyclobacterium marinum DSM 745 11038076 YP_004774994.1 CDS Cycma_3035 NC_015914.1 3548003 3549718 D PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR003439; KEGG: fps:FP0422 ABC transporter permease/ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Toxin secretion ABC transporter ATP-binding protein; ABC transporter 3548003..3549718 Cyclobacterium marinum DSM 745 11038077 YP_004774995.1 CDS Cycma_3036 NC_015914.1 3549723 3551078 D COGs: COG1566 Multidrug resistance efflux pump; KEGG: cao:Celal_1044 biotin/lipoyl attachment domain-containing protein; SPTR: HlyD family secretion protein; biotin/lipoyl attachment domain-containing protein 3549723..3551078 Cyclobacterium marinum DSM 745 11038078 YP_004774996.1 CDS Cycma_3037 NC_015914.1 3551075 3552475 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: rbi:RB2501_08275 outer membrane efflux protein; SPTR: outer membrane efflux protein; outer membrane efflux protein 3551075..3552475 Cyclobacterium marinum DSM 745 11038079 YP_004774997.1 CDS Cycma_3038 NC_015914.1 3552472 3553512 D PFAM: Uncharacterized conserved protein (DUF2183); COGs: COG4850 conserved hypothetical protein; InterPro IPR019236; KEGG: mtt:Ftrac_2155 hypothetical protein; PFAM: Protein of unknown function DUF2183; SPTR: uncharacterized protein; hypothetical protein 3552472..3553512 Cyclobacterium marinum DSM 745 11038080 YP_004774998.1 CDS Cycma_3039 NC_015914.1 3553645 3554019 R PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: cly:Celly_0215 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator; response regulator receiver complement(3553645..3554019) Cyclobacterium marinum DSM 745 11038081 YP_004774999.1 CDS Cycma_3040 NC_015914.1 3554388 3556016 R PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: 60 kDa chaperonin; InterPro IPR001844:IPR002423; KEGG: chu:CHU_1828 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; molecular chaperone GroEL complement(3554388..3556016) Cyclobacterium marinum DSM 745 11038082 YP_004775000.1 CDS Cycma_3041 NC_015914.1 3556069 3556347 R PFAM: Chaperonin 10 Kd subunit; COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10, subgroup; InterPro IPR001476:IPR020818; KEGG: aas:Aasi_0309 hypothetical protein; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; molecular chaperone GroES complement(3556069..3556347) Cyclobacterium marinum DSM 745 11038083 YP_004775001.1 CDS Cycma_3042 NC_015914.1 3556577 3557290 D KEGG: cpi:Cpin_2333 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3556577..3557290 Cyclobacterium marinum DSM 745 11038084 YP_004775002.1 CDS Cycma_3043 NC_015914.1 3557341 3558330 R PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: zpr:ZPR_2830 sterol desaturase-related protein; PFAM: Fatty acid hydroxylase; SPTR: C-5 sterol desaturase (Sterol-C5-desaturase); fatty acid hydroxylase complement(3557341..3558330) Cyclobacterium marinum DSM 745 11038085 YP_004775003.1 CDS Cycma_3044 NC_015914.1 3558490 3558858 R PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; InterPro IPR004692; KEGG: mtt:Ftrac_0761 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(3558490..3558858) Cyclobacterium marinum DSM 745 11038086 YP_004775004.1 CDS Cycma_3045 NC_015914.1 3558874 3559716 R KEGG: mtt:Ftrac_0760 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3558874..3559716) Cyclobacterium marinum DSM 745 11038087 YP_004775005.1 CDS Cycma_3046 NC_015914.1 3559757 3560290 R KEGG: mtt:Ftrac_0759 hypothetical protein; SPTR: Lipoprotein; manually curated; hypothetical protein complement(3559757..3560290) Cyclobacterium marinum DSM 745 11038088 YP_004775006.1 CDS Cycma_3047 NC_015914.1 3560277 3561590 R PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593:IPR002078:IPR002197; KEGG: chu:CHU_1822 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Sigma-54-dependent transcriptional regulator; Fis family transcriptional regulator complement(3560277..3561590) Cyclobacterium marinum DSM 745 11038089 YP_004775007.1 CDS Cycma_3048 NC_015914.1 3561605 3563065 R PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR005839:IPR006463:IPR006638:IPR013848:IPR 007197:IPR002792; KEGG: mtt:Ftrac_0757 tRNA-i(6)a37 thiotransferase enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-I(6)A37 thiotransferase enzyme MiaB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase complement(3561605..3563065) Cyclobacterium marinum DSM 745 11038090 YP_004775008.1 CDS Cycma_3049 NC_015914.1 3563360 3564871 D PFAM: Catalase; Catalase-related immune-responsive; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: Catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; SPTR: Catalase; catalase related subgroup domain-containing protein 3563360..3564871 Cyclobacterium marinum DSM 745 11038091 YP_004775009.1 CDS Cycma_3050 NC_015914.1 3564979 3569997 D PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: zpr:ZPR_2082 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: uncharacterized protein; hypothetical protein 3564979..3569997 Cyclobacterium marinum DSM 745 11038092 YP_004775010.1 CDS Cycma_3051 NC_015914.1 3570047 3572320 D PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: gfo:GFO_1564 hypothetical protein; PFAM: Bacterial surface antigen (D15); SPTR: Outer membrane protein; surface antigen (D15) 3570047..3572320 Cyclobacterium marinum DSM 745 11038093 YP_004775011.1 CDS Cycma_3052 NC_015914.1 3572317 3572511 R hypothetical protein complement(3572317..3572511) Cyclobacterium marinum DSM 745 11038094 YP_004775012.1 CDS Cycma_3053 NC_015914.1 3572939 3574015 R PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126; KEGG: gfo:GFO_3388 DNA polymerase IV 2; PFAM: DNA-repair protein, UmuC-like; SPTR: DNA polymerase IV 1; DNA polymerase IV complement(3572939..3574015) Cyclobacterium marinum DSM 745 11038095 YP_004775013.1 CDS Cycma_3054 NC_015914.1 3574024 3575373 R PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_1884 glutamate dehydrogenase (nadp); PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glutamate dehydrogenase (NADP); Glu/Leu/Phe/Val dehydrogenase complement(3574024..3575373) Cyclobacterium marinum DSM 745 11038096 YP_004775014.1 CDS Cycma_3055 NC_015914.1 3575374 3576654 R PFAM: chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: mtt:Ftrac_0756 chorismate binding protein; PFAM: Chorismate binding, C-terminal; SPTR: Para-aminobenzoate synthase, component I; chorismate binding domain-containing protein complement(3575374..3576654) Cyclobacterium marinum DSM 745 11038097 YP_004775015.1 CDS Cycma_3056 NC_015914.1 3576738 3577460 R PFAM: YceI-like domain; InterPro IPR007372; KEGG: mtt:Ftrac_0755 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YCE I like family protein; hypothetical protein complement(3576738..3577460) Cyclobacterium marinum DSM 745 11038098 YP_004775016.1 CDS Cycma_3057 NC_015914.1 3577955 3578470 D COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: cly:Celly_1903 hexapeptide transferase; SPTR: Hexapeptide transferase; hexapeptide transferase 3577955..3578470 Cyclobacterium marinum DSM 745 11038099 YP_004775017.1 CDS Cycma_3058 NC_015914.1 3578472 3580199 R PFAM: Isocitrate dehydrogenase kinase/phosphatase (AceK); COGs: COG4579 Isocitrate dehydrogenase kinase/phosphatase; HAMAP: Isocitrate dehydrogenase kinasephosphatase; InterPro IPR010452; KEGG: isocitrate dehydrogenase kinase/phosphatase; PFAM: Isocitrate dehydrogenase kinasephosphatase; SPTR: [isocitrate dehydrogenase (NADP(+))] kinase; isocitrate dehydrogenase kinase/phosphatase complement(3578472..3580199) Cyclobacterium marinum DSM 745 11038100 YP_004775018.1 CDS Cycma_3059 NC_015914.1 3580418 3581017 D PFAM: NUDIX domain; InterPro IPR000086; KEGG: ppn:Palpr_1834 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX family hydrolase; NUDIX hydrolase 3580418..3581017 Cyclobacterium marinum DSM 745 11038101 YP_004775019.1 CDS Cycma_3060 NC_015914.1 3581040 3582308 D PFAM: Protein of unknown function (DUF819); COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: mtt:Ftrac_2985 hypothetical protein; PFAM: Protein of unknown function DUF819; SPTR: Membrane protein; hypothetical protein 3581040..3582308 Cyclobacterium marinum DSM 745 11038102 YP_004775020.1 CDS Cycma_3061 NC_015914.1 3582311 3582559 D PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; SPTR: NAD-reducing hydrogenase, alpha subunit; manually curated; hypothetical protein 3582311..3582559 Cyclobacterium marinum DSM 745 11038103 YP_004775021.1 CDS Cycma_3062 NC_015914.1 3582823 3586776 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655:IPR003661:IPR003594:IPR001789:IPR 000014:IPR001610; KEGG: dfe:Dfer_2525 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; SPTR: sensory box histidine kinase/response regulator; TIGRFAM: PAS; PAS/PAC sensor hybrid histidine kinase 3582823..3586776 Cyclobacterium marinum DSM 745 11038104 YP_004775022.1 CDS Cycma_3063 NC_015914.1 3586855 3588162 D SPTR: uncharacterized protein; hypothetical protein 3586855..3588162 Cyclobacterium marinum DSM 745 11038105 YP_004775023.1 CDS Cycma_3064 NC_015914.1 3588613 3589656 D PFAM: Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: dfe:Dfer_2804 methionine synthase; PFAM: Homocysteine S-methyltransferase; SPTR: Methionine synthase; homocysteine S-methyltransferase 3588613..3589656 Cyclobacterium marinum DSM 745 11038106 YP_004775024.1 CDS Cycma_3065 NC_015914.1 3589661 3592375 D PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR000489:IPR003759:IPR006158:IPR004223:IPR 011822; KEGG: chu:CHU_1434 methionine synthase; PFAM: Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; SPTR: Methionine synthase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 3589661..3592375 Cyclobacterium marinum DSM 745 11038107 YP_004775025.1 CDS Cycma_3066 NC_015914.1 3592470 3593423 D PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171:IPR004620; KEGG: mtt:Ftrac_3624 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 3592470..3593423 Cyclobacterium marinum DSM 745 11038108 YP_004775026.1 CDS Cycma_3067 NC_015914.1 3593552 3594016 D SPTR: uncharacterized protein; hypothetical protein 3593552..3594016 Cyclobacterium marinum DSM 745 11038109 YP_004775027.1 CDS Cycma_3068 NC_015914.1 3594013 3595437 D PFAM: HD domain; Poly A polymerase head domain; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674; KEGG: mtt:Ftrac_3402 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: PolyA polymerase; polynucleotide adenylyltransferase 3594013..3595437 Cyclobacterium marinum DSM 745 11038110 YP_004775028.1 CDS Cycma_3069 NC_015914.1 3595434 3596165 D PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: mtt:Ftrac_3403 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: uncharacterized protein; hypothetical protein 3595434..3596165 Cyclobacterium marinum DSM 745 11038111 YP_004775029.1 CDS Cycma_3070 NC_015914.1 3596864 3598111 D TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; KEGG: chu:CHU_1793 dihydroorotase; SPTR: Dihydroorotase (DHOase); dihydroorotase 3596864..3598111 Cyclobacterium marinum DSM 745 11038112 YP_004775030.1 CDS Cycma_3071 NC_015914.1 3598104 3598619 D KEGG: dfe:Dfer_4468 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3598104..3598619 Cyclobacterium marinum DSM 745 11038113 YP_004775031.1 CDS Cycma_3072 NC_015914.1 3598631 3599182 D KEGG: mtt:Ftrac_1792 membrane protein; SPTR: uncharacterized protein; hypothetical protein 3598631..3599182 Cyclobacterium marinum DSM 745 11038114 YP_004775032.1 CDS Cycma_3073 NC_015914.1 3599190 3600152 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3008 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; family 2 glycosyl transferase 3599190..3600152 Cyclobacterium marinum DSM 745 11038115 YP_004775033.1 CDS Cycma_3074 NC_015914.1 3600152 3601096 D PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3007 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; family 2 glycosyl transferase 3600152..3601096 Cyclobacterium marinum DSM 745 11038116 YP_004775034.1 CDS Cycma_3075 NC_015914.1 3601393 3601701 D KEGG: bfo:BRAFLDRAFT_137021 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3601393..3601701 Cyclobacterium marinum DSM 745 11038117 YP_004775035.1 CDS Cycma_3076 NC_015914.1 3601714 3602025 D KEGG: bfo:BRAFLDRAFT_137021 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3601714..3602025 Cyclobacterium marinum DSM 745 11038118 YP_004775036.1 CDS Cycma_3077 NC_015914.1 3602038 3602259 D hypothetical protein 3602038..3602259 Cyclobacterium marinum DSM 745 11038119 YP_004775037.1 CDS Cycma_3078 NC_015914.1 3602758 3603492 D PFAM: Polysaccharide biosynthesis/export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: fps:FP1299 polysaccharide exporter; PFAM: Polysaccharide export protein; SPTR: polysaccharide export protein, BexD/CtrA/VexA family; polysaccharide export protein 3602758..3603492 Cyclobacterium marinum DSM 745 11038120 YP_004775038.1 CDS Cycma_3079 NC_015914.1 3603500 3605929 D PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856:IPR005702; KEGG: mtt:Ftrac_0603 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; SPTR: tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; capsular exopolysaccharide family protein 3603500..3605929 Cyclobacterium marinum DSM 745 11038121 YP_004775039.1 CDS Cycma_3080 NC_015914.1 3606673 3607971 D PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732:IPR014026:IPR014027:IPR017476; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 3606673..3607971 Cyclobacterium marinum DSM 745 11038122 YP_004775040.1 CDS Cycma_3081 NC_015914.1 3608068 3609504 D PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: fba:FIC_00335 lipopolysaccharide biosynthesis protein WzxC; PFAM: Polysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein wzxC; polysaccharide biosynthesis protein 3608068..3609504 Cyclobacterium marinum DSM 745 11038123 YP_004775041.1 CDS Cycma_3082 NC_015914.1 3609504 3610586 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fba:FIC_00336 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 3609504..3610586 Cyclobacterium marinum DSM 745 11038124 YP_004775042.1 CDS Cycma_3083 NC_015914.1 3611124 3612020 D PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: bth:BT_2882 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; family 2 glycosyl transferase 3611124..3612020 Cyclobacterium marinum DSM 745 11038125 YP_004775043.1 CDS Cycma_3084 NC_015914.1 3612088 3613140 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3612088..3613140 Cyclobacterium marinum DSM 745 11038126 YP_004775044.1 CDS Cycma_3085 NC_015914.1 3613400 3614425 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3613400..3614425 Cyclobacterium marinum DSM 745 11038127 YP_004775045.1 CDS Cycma_3086 NC_015914.1 3614771 3616210 D PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: shg:Sph21_2014 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: lipopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3614771..3616210 Cyclobacterium marinum DSM 745 11038128 YP_004775046.1 CDS Cycma_3087 NC_015914.1 3616484 3617533 D PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: shg:Sph21_2015 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; nitroreductase 3616484..3617533 Cyclobacterium marinum DSM 745 11038129 YP_004775047.1 CDS Cycma_3088 NC_015914.1 3617535 3618671 D PFAM: Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; KEGG: shg:Sph21_2016 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3617535..3618671 Cyclobacterium marinum DSM 745 11038130 YP_004775048.1 CDS Cycma_3089 NC_015914.1 3618668 3619549 D PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: shg:Sph21_2017 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: RfbQ; family 2 glycosyl transferase 3618668..3619549 Cyclobacterium marinum DSM 745 11038131 YP_004775049.1 CDS Cycma_3090 NC_015914.1 3619546 3620658 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: aeh:Mlg_2365 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; group 1 glycosyl transferase 3619546..3620658 Cyclobacterium marinum DSM 745 11038132 YP_004775050.1 CDS Cycma_3091 NC_015914.1 3620785 3621996 D PFAM: O-Antigen ligase; KEGG: plt:Plut_1854 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3620785..3621996 Cyclobacterium marinum DSM 745 11038133 YP_004775051.1 CDS Cycma_3092 NC_015914.1 3621989 3623086 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfs:BF1021 glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 3621989..3623086 Cyclobacterium marinum DSM 745 11038134 YP_004775052.1 CDS Cycma_3093 NC_015914.1 3623088 3623636 D COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: cly:Celly_2632 acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR: acetyltransferase; transferase hexapeptide repeat containing protein 3623088..3623636 Cyclobacterium marinum DSM 745 11038135 YP_004775053.1 CDS Cycma_3094 NC_015914.1 3623649 3624626 D PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: amu:Amuc_2097 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; nitroreductase 3623649..3624626 Cyclobacterium marinum DSM 745 11038136 YP_004775054.1 CDS Cycma_3095 NC_015914.1 3624629 3625789 D PFAM: Polysaccharide pyruvyl transferase; KEGG: dba:Dbac_2549 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3624629..3625789 Cyclobacterium marinum DSM 745 11038137 YP_004775055.1 CDS Cycma_3096 NC_015914.1 3625779 3626321 D COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: dba:Dbac_2547 acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR: acetyltransferase; transferase hexapeptide repeat containing protein 3625779..3626321 Cyclobacterium marinum DSM 745 11038138 YP_004775056.1 CDS Cycma_3097 NC_015914.1 3626342 3627250 D PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: bsa:Bacsa_2765 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 3626342..3627250 Cyclobacterium marinum DSM 745 11038139 YP_004775057.1 CDS Cycma_3098 NC_015914.1 3627444 3628070 D PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: mtt:Ftrac_3275 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Membrane protein; hypothetical protein 3627444..3628070 Cyclobacterium marinum DSM 745 11038140 YP_004775058.1 CDS Cycma_3099 NC_015914.1 3628085 3628843 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bhl:Bache_2165 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 3628085..3628843 Cyclobacterium marinum DSM 745 11038141 YP_004775059.1 CDS Cycma_3100 NC_015914.1 3628929 3629870 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fjo:Fjoh_0337 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3628929..3629870 Cyclobacterium marinum DSM 745 11038142 YP_004775060.1 CDS Cycma_3101 NC_015914.1 3630110 3631066 D PFAM: Glycosyl transferase 4; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: shg:Sph21_1832 glycosyl transferase 4; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyltransferase; glycosyl transferase family protein 3630110..3631066 Cyclobacterium marinum DSM 745 11038143 YP_004775061.1 CDS Cycma_3102 NC_015914.1 3631274 3632440 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ran:Riean_0739 DegT/DnrJ/eryc1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: General glycosylation pathway protein; DegT/DnrJ/EryC1/StrS aminotransferase 3631274..3632440 Cyclobacterium marinum DSM 745 11038144 YP_004775062.1 CDS Cycma_3103 NC_015914.1 3632451 3633041 D PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: swd:Swoo_1664 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase; sugar transferase 3632451..3633041 Cyclobacterium marinum DSM 745 11038145 YP_004775063.1 CDS Cycma_3104 NC_015914.1 3633067 3633645 D TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451:IPR020019; KEGG: mtt:Ftrac_0566 sugar O-acyltransferase, sialic acid O-acetyltransferase neud family; SPTR: uncharacterized protein; TIGRFAM: Sialic acid O-acyltransferase, NeuD; sugar O-acyltransferase 3633067..3633645 Cyclobacterium marinum DSM 745 11038146 YP_004775064.1 CDS Cycma_3105 NC_015914.1 3634231 3636150 D PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: shg:Sph21_1834 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 3634231..3636150 Cyclobacterium marinum DSM 745 11038147 YP_004775065.1 CDS Cycma_3106 NC_015914.1 3637130 3639067 D PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: mtt:Ftrac_3480 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Cap5D protein; polysaccharide biosynthesis protein CapD 3637130..3639067 Cyclobacterium marinum DSM 745 11038148 YP_004775066.1 CDS Cycma_3107 NC_015914.1 3639308 3640714 D PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: dfe:Dfer_3790 anthranilate synthase; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; SPTR: Anthranilate synthase component I; chorismate binding domain-containing protein 3639308..3640714 Cyclobacterium marinum DSM 745 11038149 YP_004775067.1 CDS Cycma_3108 NC_015914.1 3640737 3641318 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991:IPR006221; KEGG: mtt:Ftrac_1043 anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Anthranilate synthase component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 3640737..3641318 Cyclobacterium marinum DSM 745 11038150 YP_004775068.1 CDS Cycma_3109 NC_015914.1 3641318 3642328 D PFAM: Glycosyl transferase, a/b domain; Glycosyl transferase, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: rbi:RB2501_02205 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase; anthranilate phosphoribosyltransferase 3641318..3642328 Cyclobacterium marinum DSM 745 11038151 YP_004775069.1 CDS Cycma_3110 NC_015914.1 3642331 3643152 D PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: psn:Pedsa_2854 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 3642331..3643152 Cyclobacterium marinum DSM 745 11038152 YP_004775070.1 CDS Cycma_3111 NC_015914.1 3643149 3643823 D PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: cpi:Cpin_1826 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; manually curated; N-(5'-phosphoribosyl)anthranilate isomerase 3643149..3643823 Cyclobacterium marinum DSM 745 11038153 YP_004775071.1 CDS Cycma_3112 NC_015914.1 3643810 3644988 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain; InterPro IPR001926:IPR006654; KEGG: gfo:GFO_2673 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Tryptophan synthase beta chain; TIGRFAM: Tryptophan synthase, beta chain; tryptophan synthase subunit beta 3643810..3644988 Cyclobacterium marinum DSM 745 11038154 YP_004775072.1 CDS Cycma_3113 NC_015914.1 3644994 3645767 D PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; COGs: COG0159 Tryptophan synthase alpha chain; HAMAP: Tryptophan synthase, alpha chain; InterPro IPR002028; KEGG: dfe:Dfer_3798 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit alpha 3644994..3645767 Cyclobacterium marinum DSM 745 11038155 YP_004775073.1 CDS Cycma_3114 NC_015914.1 3645764 3646783 D PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006268; KEGG: mtt:Ftrac_1037 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; phospho-2-dehydro-3-deoxyheptonate aldolase 3645764..3646783 Cyclobacterium marinum DSM 745 11038156 YP_004775074.1 CDS Cycma_3115 NC_015914.1 3648020 3648481 R COGs: COG4270 membrane protein; KEGG: cly:Celly_0974 membrane protein; SPTR: Membrane protein; hypothetical protein complement(3648020..3648481) Cyclobacterium marinum DSM 745 11038157 YP_004775075.1 CDS Cycma_3116 NC_015914.1 3648533 3649099 R PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: zpr:ZPR_0736 hypothetical protein; PFAM: Cyclic nucleotide-binding; SPTR: Protein containing cyclic nucleotide-binding domain; cyclic nucleotide-binding protein complement(3648533..3649099) Cyclobacterium marinum DSM 745 11038158 YP_004775076.1 CDS Cycma_3117 NC_015914.1 3649445 3650221 D PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form; COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: mtt:Ftrac_1424 phenylalanine 4-hydroxylase; PFAM: Aromatic amino acid hydroxylase, C-terminal; SPTR: Phenylalanine-4-hydroxylase; Aromatic amino acid hydroxylase domain-containing protein 3649445..3650221 Cyclobacterium marinum DSM 745 11038159 YP_004775077.1 CDS Cycma_3118 NC_015914.1 3650289 3651881 D PFAM: Domain of unknown function (DUF303); Calcineurin-like phosphoesterase; InterPro IPR005181:IPR004843; KEGG: agr:AGROH133_04636 metallophosphoesterase; PFAM: Protein of unknown function DUF303, acetylesterase ; Metallophosphoesterase; SPTR: Metallophosphoesterase; hypothetical protein 3650289..3651881 Cyclobacterium marinum DSM 745 11038160 YP_004775078.1 CDS Cycma_3119 NC_015914.1 3651978 3652490 D SPTR: uncharacterized protein; hypothetical protein 3651978..3652490 Cyclobacterium marinum DSM 745 11038161 YP_004775079.1 CDS Cycma_3120 NC_015914.1 3652494 3654398 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594:IPR013506:IPR006171:IPR001241; KEGG: mtt:Ftrac_0643 DNA topoisomerase type IIA subunit b region 2 domain protein; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA topoisomerase IV, B subunit; DNA topoisomerase type IIA subunit B domain-containing protein 3652494..3654398 Cyclobacterium marinum DSM 745 11038162 YP_004775080.1 CDS Cycma_3121 NC_015914.1 3654552 3657146 D PFAM: DNA gyrase/topoisomerase IV, subunit A; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: mtt:Ftrac_0640 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA topoisomerase 4 subunit A; DNA gyrase/topoisomerase IV subunit A 3654552..3657146 Cyclobacterium marinum DSM 745 11038163 YP_004775081.1 CDS Cycma_3122 NC_015914.1 3657158 3657850 D PFAM: SpoU rRNA Methylase; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: ter:Tery_2249 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: tRNA guanosine-2'-O-methyltransferase; tRNA/rRNA methyltransferase SpoU 3657158..3657850 Cyclobacterium marinum DSM 745 11038164 YP_004775082.1 CDS Cycma_3123 NC_015914.1 3657944 3658360 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3657944..3658360) Cyclobacterium marinum DSM 745 11038165 YP_004775083.1 CDS Cycma_3124 NC_015914.1 3658916 3660871 D PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR004095:IPR012947:IPR002314:IPR004154:IPR 002320; KEGG: mtt:Ftrac_0510 ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SPTR: Threonine--tRNA ligase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; threonyl-tRNA synthetase 3658916..3660871 Cyclobacterium marinum DSM 745 11038166 YP_004775084.1 CDS Cycma_3125 NC_015914.1 3660957 3661508 D PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; COGs: COG0290 Translation initiation factor 3 (IF-3); HAMAP: Translation initiation factor IF-3; InterPro IPR019814:IPR019815:IPR001288; KEGG: mtt:Ftrac_0509 bacterial translation initiation factor 3 (bif-3); PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; translation initiation factor IF-3 3660957..3661508 Cyclobacterium marinum DSM 745 11038167 YP_004775085.1 CDS Cycma_3126 NC_015914.1 3661531 3661725 D PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; HAMAP: Ribosomal protein L35; InterPro IPR001706; KEGG: mtt:Ftrac_0508 LSU ribosomal protein l35p; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; 50S ribosomal protein L35 3661531..3661725 Cyclobacterium marinum DSM 745 11038168 YP_004775086.1 CDS Cycma_3127 NC_015914.1 3661821 3662165 D PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: wvi:Weevi_1268 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; 50S ribosomal protein L20 3661821..3662165 Cyclobacterium marinum DSM 745 11038169 YP_004775087.1 CDS Cycma_3128 NC_015914.1 3662897 3663301 D KEGG: mtt:Ftrac_0683 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3662897..3663301 Cyclobacterium marinum DSM 745 11038171 YP_004775088.1 CDS Cycma_3129 NC_015914.1 3663527 3665356 D PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: mtt:Ftrac_0213 permease yjgp/yjgq family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Membrane protein; YjgP/YjgQ family permease 3663527..3665356 Cyclobacterium marinum DSM 745 11038172 YP_004775089.1 CDS Cycma_3130 NC_015914.1 3665420 3665695 D PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589:IPR005290; KEGG: mtt:Ftrac_0214 SSU ribosomal protein s15p; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; 30S ribosomal protein S15 3665420..3665695 Cyclobacterium marinum DSM 745 11038173 YP_004775090.1 CDS Cycma_3131 NC_015914.1 3665797 3667932 D PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease, domain 1; 3' exoribonuclease, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087; KEGG: chu:CHU_1786 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 3665797..3667932 Cyclobacterium marinum DSM 745 11038174 YP_004775091.1 CDS Cycma_3132 NC_015914.1 3668033 3668896 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284; KEGG: mtt:Ftrac_0216 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit 3668033..3668896 Cyclobacterium marinum DSM 745 11038175 YP_004775092.1 CDS Cycma_3133 NC_015914.1 3669052 3669990 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR005982; KEGG: lby:Lbys_1281 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin-disulfide reductase; TIGRFAM: Thioredoxin reductase; thioredoxin reductase 3669052..3669990 Cyclobacterium marinum DSM 745 11038176 YP_004775093.1 CDS Cycma_3134 NC_015914.1 3670003 3671034 D PFAM: Peptidase M23; LysM domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR018392:IPR002482; KEGG: chu:CHU_1777 M24/M37 family peptidase; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidase, M23/M37 family; peptidase M23 3670003..3671034 Cyclobacterium marinum DSM 745 11038177 YP_004775094.1 CDS Cycma_3135 NC_015914.1 3671064 3671780 D PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: bacillithiol biosynthesis deacetylase BshB1; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: mtt:Ftrac_0218 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: GlcNAc-PI de-N-acetylase; LmbE family protein 3671064..3671780 Cyclobacterium marinum DSM 745 11038178 YP_004775095.1 CDS Cycma_3136 NC_015914.1 3671826 3671954 D hypothetical protein 3671826..3671954 Cyclobacterium marinum DSM 745 11038179 YP_004775096.1 CDS Cycma_3137 NC_015914.1 3672078 3672716 R PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; COGs: COG0259 Pyridoxamine-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; InterPro IPR000659:IPR011576:IPR019576; KEGG: bte:BTH_I0717 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase complement(3672078..3672716) Cyclobacterium marinum DSM 745 11038180 YP_004775097.1 CDS Cycma_3138 NC_015914.1 3672815 3673384 D PFAM: Uncharacterized ACR, COG1678; COGs: COG1678 transcriptional regulator protein; InterPro IPR003774; KEGG: mtt:Ftrac_0222 hypothetical protein; PFAM: Protein of unknown function DUF179; SPTR: transcriptional regulator; hypothetical protein 3672815..3673384 Cyclobacterium marinum DSM 745 11038181 YP_004775098.1 CDS Cycma_3139 NC_015914.1 3673444 3675477 D PFAM: Domain of Unknown Function (DUF349); InterPro IPR007139; KEGG: mtt:Ftrac_0223 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: uncharacterized protein; hypothetical protein 3673444..3675477 Cyclobacterium marinum DSM 745 11038182 YP_004775099.1 CDS Cycma_3140 NC_015914.1 3676058 3676540 D KEGG: hypothetical protein; hypothetical protein 3676058..3676540 Cyclobacterium marinum DSM 745 11038184 YP_004775100.1 CDS Cycma_3141 NC_015914.1 3676773 3676988 R hypothetical protein complement(3676773..3676988) Cyclobacterium marinum DSM 745 11038185 YP_004775101.1 CDS Cycma_3142 NC_015914.1 3676981 3677265 R KEGG: bhl:Bache_0306 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3676981..3677265) Cyclobacterium marinum DSM 745 11038186 YP_004775102.1 CDS Cycma_3143 NC_015914.1 3677322 3678494 R KEGG: pgi:PG0870 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3677322..3678494) Cyclobacterium marinum DSM 745 11038187 YP_004775103.1 CDS Cycma_3144 NC_015914.1 3678457 3678666 R hypothetical protein complement(3678457..3678666) Cyclobacterium marinum DSM 745 11038188 YP_004775104.1 CDS Cycma_3145 NC_015914.1 3678690 3680192 R PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain; COGs: COG3378 ATPase; InterPro IPR014818:IPR006500; KEGG: sli:Slin_3095 P4 family phage/plasmid primase; PFAM: Phage/plasmid primase, P4, C-terminal; SPTR: Phage/plasmid primase, P4 family; TIGRFAM: DNA primase, phage/plasmid; phage/plasmid primase, P4 family complement(3678690..3680192) Cyclobacterium marinum DSM 745 11038189 YP_004775105.1 CDS Cycma_3146 NC_015914.1 3680402 3680752 R TIGRFAM: DNA binding domain, excisionase; InterPro IPR000551; KEGG: bsa:Bacsa_0523 DNA binding domain-containing protein, excisionase; PFAM: HTH transcriptional regulator, MerR; SPTR: DNA binding domain protein, excisionase; regulatory protein MerR complement(3680402..3680752) Cyclobacterium marinum DSM 745 11038190 YP_004775106.1 CDS Cycma_3147 NC_015914.1 3680862 3681908 R KEGG: cpb:Cphamn1_0677 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3680862..3681908) Cyclobacterium marinum DSM 745 11038191 YP_004775107.1 CDS Cycma_3148 NC_015914.1 3681967 3683259 R PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_03935 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; integrase complement(3681967..3683259) Cyclobacterium marinum DSM 745 11038192 YP_004775108.1 CDS Cycma_3149 NC_015914.1 3683378 3683665 R hypothetical protein complement(3683378..3683665) Cyclobacterium marinum DSM 745 11038193 YP_004775109.1 CDS Cycma_3150 NC_015914.1 3683751 3683858 D hypothetical protein 3683751..3683858 Cyclobacterium marinum DSM 745 11038194 YP_004775110.1 CDS Cycma_3151 NC_015914.1 3684124 3685410 D KEGG: rba:RB3006 sialidase; SPTR: Probable sialidase; sialidase 3684124..3685410 Cyclobacterium marinum DSM 745 11038195 YP_004775111.1 CDS Cycma_3152 NC_015914.1 3685694 3685792 R hypothetical protein complement(3685694..3685792) Cyclobacterium marinum DSM 745 11038196 YP_004775112.1 CDS Cycma_3153 NC_015914.1 3685840 3687933 R PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789:IPR018060; KEGG: fjo:Fjoh_3120 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Helix-turn-helix, AraC domain; SPTR: uncharacterized protein; integral membrane sensor hybrid histidine kinase complement(3685840..3687933) Cyclobacterium marinum DSM 745 11038197 YP_004775113.1 CDS Cycma_3154 NC_015914.1 3688239 3689135 D PFAM: Phage Tail Collar Domain; InterPro IPR011083; KEGG: Tail Collar domain-containing protein; PFAM: Phage Tail Collar; SPTR: phage protein; Tail Collar domain-containing protein 3688239..3689135 Cyclobacterium marinum DSM 745 11038198 YP_004775114.1 CDS Cycma_3155 NC_015914.1 3689146 3697761 D InterPro IPR012680; KEGG: Fibronectin type III domain-containing protein; PFAM: Laminin G, subdomain 2; SPTR: Fibronectin type III domain protein; laminin G sub domain 2 3689146..3697761 Cyclobacterium marinum DSM 745 11038199 YP_004775115.1 CDS Cycma_3156 NC_015914.1 3697765 3698685 D KEGG: Fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; hypothetical protein 3697765..3698685 Cyclobacterium marinum DSM 745 11038200 YP_004775116.1 CDS Cycma_3157 NC_015914.1 3698689 3699099 D hypothetical protein 3698689..3699099 Cyclobacterium marinum DSM 745 11038201 YP_004775117.1 CDS Cycma_3158 NC_015914.1 3699356 3700642 D PFAM: Glycosyl hydrolases family 28; KEGG: dfe:Dfer_0681 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3699356..3700642 Cyclobacterium marinum DSM 745 11038202 YP_004775118.1 CDS Cycma_3159 NC_015914.1 3700650 3700793 D hypothetical protein 3700650..3700793 Cyclobacterium marinum DSM 745 11038203 YP_004775119.1 CDS Cycma_3160 NC_015914.1 3700878 3702206 D PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: scl:sce6459 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: amidohydrolase; amidohydrolase 3700878..3702206 Cyclobacterium marinum DSM 745 11038204 YP_004775120.1 CDS Cycma_3161 NC_015914.1 3702277 3702966 R PFAM: SNARE associated Golgi protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: zpr:ZPR_2562 SNARE associated Golgi protein-like protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-like protein; hypothetical protein complement(3702277..3702966) Cyclobacterium marinum DSM 745 11038205 YP_004775121.1 CDS Cycma_3162 NC_015914.1 3703093 3703668 R PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: fjo:Fjoh_0182 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein; pentapeptide repeat-containing protein complement(3703093..3703668) Cyclobacterium marinum DSM 745 11038206 YP_004775122.1 CDS Cycma_3163 NC_015914.1 3703896 3703997 D hypothetical protein 3703896..3703997 Cyclobacterium marinum DSM 745 11038207 YP_004775123.1 CDS Cycma_3164 NC_015914.1 3705007 3705537 D hypothetical protein 3705007..3705537 Cyclobacterium marinum DSM 745 11038208 YP_004775124.1 CDS Cycma_3165 NC_015914.1 3705744 3707198 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: cpi:Cpin_5361 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: Outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(3705744..3707198) Cyclobacterium marinum DSM 745 11038209 YP_004775125.1 CDS Cycma_3166 NC_015914.1 3707255 3710425 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: bvu:BVU_3592 cation/multidrug efflux pump; PFAM: Acriflavin resistance protein; SPTR: HAE1 efflux family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3707255..3710425) Cyclobacterium marinum DSM 745 11038210 YP_004775126.1 CDS Cycma_3167 NC_015914.1 3710445 3711668 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bvu:BVU_3591 multidrug resistance protein MexA; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(3710445..3711668) Cyclobacterium marinum DSM 745 11038211 YP_004775127.1 CDS Cycma_3168 NC_015914.1 3712455 3714029 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR001734:IPR019900; KEGG: cao:Celal_0453 sss sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(3712455..3714029) Cyclobacterium marinum DSM 745 11038212 YP_004775128.1 CDS Cycma_3169 NC_015914.1 3714100 3714981 R PFAM: Family of unknown function (DUF706); InterPro IPR007828; KEGG: cao:Celal_0454 inositol oxygenase; PFAM: Protein of unknown function DUF706; SPTR: Inositol oxygenase; hypothetical protein complement(3714100..3714981) Cyclobacterium marinum DSM 745 11038213 YP_004775129.1 CDS Cycma_3170 NC_015914.1 3715426 3717105 R PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; InterPro IPR004433:IPR012001; KEGG: mtt:Ftrac_3778 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; SPTR:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexe ne-1-carboxylatesynthase; TIGRFAM: Menaquinone biosynthesis protein MenD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(3715426..3717105) Cyclobacterium marinum DSM 745 11038214 YP_004775130.1 CDS Cycma_3171 NC_015914.1 3717108 3718316 R PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; COGs: COG1169 Isochorismate synthase; InterPro IPR015890; KEGG: mtt:Ftrac_1129 chorismate binding protein; PFAM: Chorismate binding, C-terminal; SPTR: isochorismate synthase; chorismate binding domain-containing protein complement(3717108..3718316) Cyclobacterium marinum DSM 745 11038215 YP_004775131.1 CDS Cycma_3172 NC_015914.1 3718322 3718741 R PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: mtt:Ftrac_1128 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase; TIGRFAM: Phenylacetic acid degradation-related protein; phenylacetic acid degradation-like protein complement(3718322..3718741) Cyclobacterium marinum DSM 745 11038216 YP_004775132.1 CDS Cycma_3173 NC_015914.1 3718795 3719418 D PFAM: Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: mtt:Ftrac_1127 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: phosphoglycerate mutase; phosphoglycerate mutase 3718795..3719418 Cyclobacterium marinum DSM 745 11038217 YP_004775133.1 CDS Cycma_3174 NC_015914.1 3719413 3719823 R SPTR: uncharacterized protein; hypothetical protein complement(3719413..3719823) Cyclobacterium marinum DSM 745 11038218 YP_004775134.1 CDS Cycma_3175 NC_015914.1 3719923 3720690 R PFAM: zinc ribbon domain; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: mtt:Ftrac_3578 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: zinc ribbon domain protein; hypothetical protein complement(3719923..3720690) Cyclobacterium marinum DSM 745 11038219 YP_004775135.1 CDS Cycma_3176 NC_015914.1 3720694 3721794 R PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: dfe:Dfer_5147 protein of unknown function DUF34; PFAM: NGG1p interacting factor 3, NIF3; SPTR: NIF3-related protein; TIGRFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 complement(3720694..3721794) Cyclobacterium marinum DSM 745 11038220 YP_004775136.1 CDS Cycma_3177 NC_015914.1 3721839 3722909 D PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: cpi:Cpin_3670 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 3721839..3722909 Cyclobacterium marinum DSM 745 11038221 YP_004775137.1 CDS Cycma_3178 NC_015914.1 3722890 3724848 D KEGG: mtt:Ftrac_3581 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3722890..3724848 Cyclobacterium marinum DSM 745 11038222 YP_004775138.1 CDS Cycma_3179 NC_015914.1 3724858 3725469 D PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; InterPro IPR010386; KEGG: mtt:Ftrac_3582 tRNA-hydroxylase; PFAM: tRNA--hydroxylase; SPTR: tRNA-(MS[2]IO[6]A)-hydroxylase; tRNA-hydroxylase 3724858..3725469 Cyclobacterium marinum DSM 745 11038223 YP_004775139.1 CDS Cycma_3180 NC_015914.1 3725699 3726943 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: mtt:Ftrac_3664 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, permease; hypothetical protein 3725699..3726943 Cyclobacterium marinum DSM 745 11038224 YP_004775140.1 CDS Cycma_3181 NC_015914.1 3726955 3728643 D PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: psn:Pedsa_0688 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; Glucose-methanol-choline oxidoreductase, N-terminal; SPTR: Oxidoreductase, GMC family; FAD dependent oxidoreductase 3726955..3728643 Cyclobacterium marinum DSM 745 11038225 YP_004775141.1 CDS Cycma_3182 NC_015914.1 3728782 3730371 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01931 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 3728782..3730371 Cyclobacterium marinum DSM 745 11038226 YP_004775142.1 CDS Cycma_3183 NC_015914.1 3730649 3730831 D hypothetical protein 3730649..3730831 Cyclobacterium marinum DSM 745 11038227 YP_004775143.1 CDS Cycma_3184 NC_015914.1 3731031 3732830 D COGs: COG5616 integral membrane protein; InterPro IPR001440:IPR019734:IPR018060; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Transcriptional regulator, AraC family; hypothetical protein 3731031..3732830 Cyclobacterium marinum DSM 745 11038228 YP_004775144.1 CDS Cycma_3185 NC_015914.1 3732929 3733573 D COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: ppn:Palpr_0909 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein; transferase hexapeptide repeat containing protein 3732929..3733573 Cyclobacterium marinum DSM 745 11038229 YP_004775145.1 CDS Cycma_3186 NC_015914.1 3733910 3736309 D PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 3733910..3736309 Cyclobacterium marinum DSM 745 11038230 YP_004775146.1 CDS Cycma_3187 NC_015914.1 3736336 3737280 D KEGG: lby:Lbys_2735 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3736336..3737280 Cyclobacterium marinum DSM 745 11038231 YP_004775147.1 CDS Cycma_3188 NC_015914.1 3737396 3738196 R PFAM: Response regulator receiver domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789; KEGG: mtt:Ftrac_0265 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; response regulator receiver protein complement(3737396..3738196) Cyclobacterium marinum DSM 745 11038232 YP_004775148.1 CDS Cycma_3189 NC_015914.1 3738749 3743911 D PFAM: BNR/Asp-box repeat; KEGG: chu:CHU_1335 endoglucanase-like protein; SPTR: Outer membrane protein; hypothetical protein 3738749..3743911 Cyclobacterium marinum DSM 745 11038233 YP_004775149.1 CDS Cycma_3190 NC_015914.1 3743978 3744394 D hypothetical protein 3743978..3744394 Cyclobacterium marinum DSM 745 11038234 YP_004775150.1 CDS Cycma_3191 NC_015914.1 3744956 3747610 D KEGG: ttr:Tter_1124 transcriptional regulator, XRE family; SPTR: Diguanylate cyclase; hypothetical protein 3744956..3747610 Cyclobacterium marinum DSM 745 11038235 YP_004775151.1 CDS Cycma_3192 NC_015914.1 3747603 3748208 D KEGG: pbs:Plabr_3103 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3747603..3748208 Cyclobacterium marinum DSM 745 11038236 YP_004775152.1 CDS Cycma_3193 NC_015914.1 3748310 3750214 R PFAM: Histidine kinase; COGs: COG3920 Signal transduction histidine kinase; InterPro IPR001440:IPR003594:IPR019734; KEGG: mtt:Ftrac_0266 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Tetratricopeptide TPR-1; SPTR: Serine/threonine protein kinases; signal transduction histidine kinase complement(3748310..3750214) Cyclobacterium marinum DSM 745 11038237 YP_004775153.1 CDS Cycma_3194 NC_015914.1 3750439 3750606 D hypothetical protein 3750439..3750606 Cyclobacterium marinum DSM 745 11034357 YP_004775154.1 CDS Cycma_3195 NC_015914.1 3750566 3750721 R hypothetical protein complement(3750566..3750721) Cyclobacterium marinum DSM 745 11034358 YP_004775155.1 CDS Cycma_3196 NC_015914.1 3751120 3752724 D hypothetical protein 3751120..3752724 Cyclobacterium marinum DSM 745 11034359 YP_004775156.1 CDS Cycma_3197 NC_015914.1 3752959 3753870 D PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611:IPR011877; KEGG: cyc:PCC7424_3869 ribokinase; PFAM: Carbohydrate/purine kinase; SPTR: Ribokinase; TIGRFAM: Ribokinase, bacterial; ribokinase 3752959..3753870 Cyclobacterium marinum DSM 745 11034360 YP_004775157.1 CDS Cycma_3198 NC_015914.1 3753917 3754918 D PFAM: Inosine-uridine preferring nucleoside hydrolase; COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: bpb:bpr_I0724 inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3753917..3754918 Cyclobacterium marinum DSM 745 11034361 YP_004775158.1 CDS Cycma_3199 NC_015914.1 3755009 3756007 D PFAM: Fatty acid elongase 3-ketoacyl-CoA synthase 1; KEGG: integral membrane protein; sugar permease; SPTR: Sugar transport family protein; integral membrane protein 3755009..3756007 Cyclobacterium marinum DSM 745 11034362 YP_004775159.1 CDS Cycma_3200 NC_015914.1 3756119 3756475 R InterPro IPR005560; KEGG: gfo:GFO_2936 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3756119..3756475) Cyclobacterium marinum DSM 745 11034363 YP_004775160.1 CDS Cycma_3201 NC_015914.1 3756507 3757355 R COGs: COG2367 Beta-lactamase class A; KEGG: ttm:Tthe_2446 beta-lactamase; SPTR: Beta-lactamase; beta-lactamase complement(3756507..3757355) Cyclobacterium marinum DSM 745 11034364 YP_004775161.1 CDS Cycma_3202 NC_015914.1 3757368 3758912 R PFAM: AbgT transporter family; TIGRFAM: p-Aminobenzoyl-glutamate transporter family; COGs: COG2978 p-aminobenzoyl-glutamate transporter; InterPro IPR004697; KEGG: saz:Sama_3423 transporter; PFAM: AbgT transporter; SPTR: Transporter; manually curated; AbgT transporter complement(3757368..3758912) Cyclobacterium marinum DSM 745 11034365 YP_004775162.1 CDS Cycma_3203 NC_015914.1 3759077 3759910 R PFAM: Rhodanese-like domain; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fjo:Fjoh_2623 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; rhodanese-like protein complement(3759077..3759910) Cyclobacterium marinum DSM 745 11034366 YP_004775163.1 CDS Cycma_3204 NC_015914.1 3760006 3760752 R PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR011284; KEGG: mtt:Ftrac_3320 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase complement(3760006..3760752) Cyclobacterium marinum DSM 745 11034367 YP_004775164.1 CDS Cycma_3205 NC_015914.1 3760971 3762368 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099:IPR006258; KEGG: mtt:Ftrac_3319 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 3760971..3762368 Cyclobacterium marinum DSM 745 11034368 YP_004775165.1 CDS Cycma_3206 NC_015914.1 3762422 3762955 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR007630:IPR014284; KEGG: mtt:Ftrac_3318 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-E factor heat shock and oxidative stress; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3762422..3762955 Cyclobacterium marinum DSM 745 11034369 YP_004775166.1 CDS Cycma_3207 NC_015914.1 3762955 3763797 D PFAM: Anti-sigma-K factor rskA; InterPro IPR018764; KEGG: mtt:Ftrac_3317 anti-sigma K factor rska; PFAM: Anti-sigma K factor RskA; SPTR: uncharacterized protein; anti-sigma-K factor RskA 3762955..3763797 Cyclobacterium marinum DSM 745 11034370 YP_004775167.1 CDS Cycma_3208 NC_015914.1 3764026 3764484 D PFAM: Protein of unknown function (DUF2721); KEGG: psn:Pedsa_1226 hypothetical protein; SPTR: Cellulose-binding protein II; hypothetical protein 3764026..3764484 Cyclobacterium marinum DSM 745 11034371 YP_004775168.1 CDS Cycma_3209 NC_015914.1 3764481 3765515 D PFAM: Beta-eliminating lyase; COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: dfe:Dfer_4745 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; SPTR: Low-specificity L-threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 3764481..3765515 Cyclobacterium marinum DSM 745 11034372 YP_004775169.1 CDS Cycma_3210 NC_015914.1 3765558 3766820 D PFAM: MgsA AAA+ ATPase C terminal; ATPase associated with various cellular activities (AAA); COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: cpi:Cpin_0165 ATPase AAA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family; ATPase AAA 3765558..3766820 Cyclobacterium marinum DSM 745 11034373 YP_004775170.1 CDS Cycma_3211 NC_015914.1 3766826 3767269 R SPTR: outer membrane insertion C-signal; hypothetical protein complement(3766826..3767269) Cyclobacterium marinum DSM 745 11034374 YP_004775171.1 CDS Cycma_3212 NC_015914.1 3767384 3767956 D PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: mtt:Ftrac_0879 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol-disulfide oxidoreductase ResA; alkyl hydroperoxide reductase 3767384..3767956 Cyclobacterium marinum DSM 745 11034375 YP_004775172.1 CDS Cycma_3213 NC_015914.1 3768006 3768116 R hypothetical protein complement(3768006..3768116) Cyclobacterium marinum DSM 745 11034376 YP_004775173.1 CDS Cycma_3214 NC_015914.1 3768117 3769268 R TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_10626 cation efflux system protein; SPTR: Cation efflux system protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(3768117..3769268) Cyclobacterium marinum DSM 745 11034377 YP_004775174.1 CDS Cycma_3215 NC_015914.1 3769283 3773617 R PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR001036:IPR004763; KEGG: fbc:FB2170_10631 transport-related membrane protein; PFAM: Acriflavin resistance protein; SPTR: transport-related membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(3769283..3773617) Cyclobacterium marinum DSM 745 11034378 YP_004775175.1 CDS Cycma_3216 NC_015914.1 3773817 3775166 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: fjo:Fjoh_2879 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Periplasmic sensor signal transduction histidine kinase; histidine kinase complement(3773817..3775166) Cyclobacterium marinum DSM 745 11034379 YP_004775176.1 CDS Cycma_3217 NC_015914.1 3775205 3775873 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: zpr:ZPR_1917 two component transcriptional regulator winged helix family protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator; winged helix family two component transcriptional regulator complement(3775205..3775873) Cyclobacterium marinum DSM 745 11034380 YP_004775177.1 CDS Cycma_3218 NC_015914.1 3776319 3776990 R PFAM: Methyltransferase domain; KEGG: npu:Npun_R4833 methyltransferase type 11; SPTR: uncharacterized protein; type 11 methyltransferase complement(3776319..3776990) Cyclobacterium marinum DSM 745 11034381 YP_004775178.1 CDS Cycma_3219 NC_015914.1 3777582 3778832 R TIGRFAM: gamma-glutamyl phosphate reductase; COGs: COG0014 Gamma-glutamyl phosphate reductase; HAMAP: Glutamate-5-semialdehyde dehydrogenase; InterPro IPR012134:IPR000965; KEGG: cts:Ctha_1455 gamma-glutamyl phosphate reductase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; gamma-glutamyl phosphate reductase complement(3777582..3778832) Cyclobacterium marinum DSM 745 11034382 YP_004775179.1 CDS Cycma_3220 NC_015914.1 3778862 3779947 R PFAM: Amino acid kinase; PUA domain; TIGRFAM: glutamate 5-kinase; COGs: COG0263 Glutamate 5-kinase; HAMAP: Glutamate 5-kinase; InterPro IPR001048:IPR002478:IPR005715; KEGG: ppn:Palpr_1703 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; SPTR: Glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase, ProB-related; glutamate 5-kinase complement(3778862..3779947) Cyclobacterium marinum DSM 745 11034383 YP_004775180.1 CDS Cycma_3221 NC_015914.1 3780286 3781644 D PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: mtt:Ftrac_3788 amino acid carrier protein; PFAM: Sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein 3780286..3781644 Cyclobacterium marinum DSM 745 11034384 YP_004775181.1 CDS Cycma_3222 NC_015914.1 3781641 3782747 D PFAM: Glycerate kinase; TIGRFAM: glycerate kinase; COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: shg:Sph21_4632 glycerate kinase; PFAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: Glycerate kinase; glycerate kinase 3781641..3782747 Cyclobacterium marinum DSM 745 11034385 YP_004775182.1 CDS Cycma_3223 NC_015914.1 3782936 3784966 D KEGG: cts:Ctha_0375 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3782936..3784966 Cyclobacterium marinum DSM 745 11034386 YP_004775183.1 CDS Cycma_3224 NC_015914.1 3785392 3788031 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: cli:Clim_1083 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase 3785392..3788031 Cyclobacterium marinum DSM 745 11034387 YP_004775184.1 CDS Cycma_3225 NC_015914.1 3788092 3788412 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; InterPro IPR001041; KEGG: sli:Slin_3269 ferredoxin; PFAM: Ferredoxin; SPTR: Ferredoxin, 2Fe-2S; ferredoxin complement(3788092..3788412) Cyclobacterium marinum DSM 745 11034388 YP_004775185.1 CDS Cycma_3226 NC_015914.1 3788428 3789432 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase; InterPro IPR013027; KEGG: sli:Slin_3270 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase; ferredoxin-NADP reductase complement(3788428..3789432) Cyclobacterium marinum DSM 745 11034389 YP_004775186.1 CDS Cycma_3227 NC_015914.1 3789527 3789961 R PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: shg:Sph21_2970 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; MarR family transcriptional regulator complement(3789527..3789961) Cyclobacterium marinum DSM 745 11034390 YP_004775187.1 CDS Cycma_3228 NC_015914.1 3790130 3790915 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: rbi:RB2501_09760 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3790130..3790915 Cyclobacterium marinum DSM 745 11034391 YP_004775188.1 CDS Cycma_3229 NC_015914.1 3790910 3791890 R PFAM: Cytochrome c; KEGG: phe:Phep_2958 cytochrome c family protein; SPTR: Cytochrome c-related protein; cytochrome c family protein complement(3790910..3791890) Cyclobacterium marinum DSM 745 11034392 YP_004775189.1 CDS Cycma_3230 NC_015914.1 3792020 3793036 R PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: cte:CT0412 iron(III) ABC transporter, ATP-binding protein, PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Iron compound ABC transporter, ATP-binding protein; ABC transporter complement(3792020..3793036) Cyclobacterium marinum DSM 745 11034393 YP_004775190.1 CDS Cycma_3231 NC_015914.1 3793048 3794070 R PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cly:Celly_0155 ABC-type transporter, integral membrane subunit; PFAM: Bacterial transport system permease; SPTR: Iron compound ABC transporter, permease; ABC transporter permease complement(3793048..3794070) Cyclobacterium marinum DSM 745 11034394 YP_004775191.1 CDS Cycma_3232 NC_015914.1 3794075 3795208 R PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; KEGG: periplasmic binding protein; SPTR: iron(III) ABC transporter, periplasmic iron-binding protein; periplasmic binding protein complement(3794075..3795208) Cyclobacterium marinum DSM 745 11034395 YP_004775192.1 CDS Cycma_3233 NC_015914.1 3795713 3797599 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_3390 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 3795713..3797599 Cyclobacterium marinum DSM 745 11034396 YP_004775193.1 CDS Cycma_3234 NC_015914.1 3797596 3798639 D KEGG: cat:CA2559_12503 surface layer protein; SPTR: uncharacterized protein; hypothetical protein 3797596..3798639 Cyclobacterium marinum DSM 745 11034397 YP_004775194.1 CDS Cycma_3235 NC_015914.1 3798976 3799572 R KEGG: dfe:Dfer_3662 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3798976..3799572) Cyclobacterium marinum DSM 745 11034398 YP_004775195.1 CDS Cycma_3236 NC_015914.1 3799576 3800853 R KEGG: sli:Slin_5493 hypothetical protein; SPTR: LVIVD repeat superfamily; hypothetical protein complement(3799576..3800853) Cyclobacterium marinum DSM 745 11034399 YP_004775196.1 CDS Cycma_3237 NC_015914.1 3800991 3801407 R PFAM: Nucleotidyltransferase substrate binding protein like; InterPro IPR010235; KEGG: mtt:Ftrac_1260 nucleotidyltransferase substrate binding protein, hi0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; SPTR: toxin-antitoxin system, antitoxin component; nucleotidyltransferase substrate binding protein complement(3800991..3801407) Cyclobacterium marinum DSM 745 11034400 YP_004775197.1 CDS Cycma_3238 NC_015914.1 3801479 3802054 R PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: mtt:Ftrac_3235 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC complement(3801479..3802054) Cyclobacterium marinum DSM 745 11034401 YP_004775198.1 CDS Cycma_3239 NC_015914.1 3802093 3803211 D PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_0629 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; family 2 glycosyl transferase 3802093..3803211 Cyclobacterium marinum DSM 745 11034402 YP_004775199.1 CDS Cycma_3240 NC_015914.1 3803255 3803506 D KEGG: mtt:Ftrac_0628 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3803255..3803506 Cyclobacterium marinum DSM 745 11034403 YP_004775200.1 CDS Cycma_3241 NC_015914.1 3803508 3804725 D PFAM: Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: mtt:Ftrac_0623 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Sigma factor regulation protein; Ser/Thr phosphatase 3803508..3804725 Cyclobacterium marinum DSM 745 11034404 YP_004775201.1 CDS Cycma_3242 NC_015914.1 3804727 3805353 D PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: phe:Phep_0661 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; polysaccharide deacetylase 3804727..3805353 Cyclobacterium marinum DSM 745 11034405 YP_004775202.1 CDS Cycma_3243 NC_015914.1 3805357 3806457 D PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: chu:CHU_2174 polysaccharide-forming b-glycosyltransferase-like protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 3805357..3806457 Cyclobacterium marinum DSM 745 11034406 YP_004775203.1 CDS Cycma_3244 NC_015914.1 3806454 3807236 D PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Deoxyribonuclease, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; TatD family hydrolase 3806454..3807236 Cyclobacterium marinum DSM 745 11034407 YP_004775204.1 CDS Cycma_3245 NC_015914.1 3807226 3808302 D PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034:IPR006033; KEGG: mtt:Ftrac_0619 asparaginase; PFAM: Asparaginase/glutaminase; SPTR: L-asparaginase; TIGRFAM: L-asparaginase, type I; type I L-asparaginase 3807226..3808302 Cyclobacterium marinum DSM 745 11034408 YP_004775205.1 CDS Cycma_3246 NC_015914.1 3809345 3809626 D hypothetical protein 3809345..3809626 Cyclobacterium marinum DSM 745 11034410 YP_004775206.1 CDS Cycma_3247 NC_015914.1 3809711 3810946 D PFAM: Virulence-associated protein E; COGs: COG5545 P-loop ATPase and inactivated derivatives; InterPro IPR007936; KEGG: fps:FP0491 hypothetical protein; PFAM: Virulence-associated E; SPTR: uncharacterized protein; virulence-associated E family protein 3809711..3810946 Cyclobacterium marinum DSM 745 11034411 YP_004775207.1 CDS Cycma_3248 NC_015914.1 3811156 3812031 D KEGG: bfs:BF3283 transposon-related/mobilisation protein; SPTR: uncharacterized protein; transposon-related/mobilization protein 3811156..3812031 Cyclobacterium marinum DSM 745 11034412 YP_004775208.1 CDS Cycma_3249 NC_015914.1 3812625 3813188 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: phe:Phep_1791 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3812625..3813188 Cyclobacterium marinum DSM 745 11034413 YP_004775209.1 CDS Cycma_3250 NC_015914.1 3813195 3814115 D PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: chu:CHU_1181 response regulator, positive activator of UhpT transcription; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family; LuxR family transcriptional regulator 3813195..3814115 Cyclobacterium marinum DSM 745 11034414 YP_004775210.1 CDS Cycma_3251 NC_015914.1 3814329 3815444 D hypothetical protein 3814329..3815444 Cyclobacterium marinum DSM 745 11034415 YP_004775211.1 CDS Cycma_3252 NC_015914.1 3815444 3816217 D hypothetical protein 3815444..3816217 Cyclobacterium marinum DSM 745 11034416 YP_004775212.1 CDS Cycma_3253 NC_015914.1 3816235 3816822 D KEGG: chu:CHU_3210 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3816235..3816822 Cyclobacterium marinum DSM 745 11034417 YP_004775213.1 CDS Cycma_3254 NC_015914.1 3816819 3821747 D KEGG: chu:CHU_3209 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3816819..3821747 Cyclobacterium marinum DSM 745 11034418 YP_004775214.1 CDS Cycma_3255 NC_015914.1 3821762 3825220 D PFAM: Leucine Rich Repeat; PKD domain; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR001611:IPR000601:IPR003591; KEGG: tps:THAPSDRAFT_262217 hypothetical protein; PFAM: PKD; Leucine-rich repeat; SPTR: Disease resistance protein; PKD domain-containing protein 3821762..3825220 Cyclobacterium marinum DSM 745 11034419 YP_004775215.1 CDS Cycma_3256 NC_015914.1 3825271 3834558 D PFAM: Leucine Rich Repeat; Fibronectin type III domain; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR003961:IPR001611:IPR006530:IPR003591; KEGG: cpi:Cpin_4789 hypothetical protein; PFAM: Fibronectin, type III; Leucine-rich repeat; YD repeat; SMART: Fibronectin, type III; Leucine-rich repeat, typical subtype; SPTR: YD repeat protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat; RHS repeat-associated core domain-containing protein 3825271..3834558 Cyclobacterium marinum DSM 745 11034420 YP_004775216.1 CDS Cycma_3257 NC_015914.1 3834560 3834757 D hypothetical protein 3834560..3834757 Cyclobacterium marinum DSM 745 11034421 YP_004775217.1 CDS Cycma_3258 NC_015914.1 3834812 3835099 D hypothetical protein 3834812..3835099 Cyclobacterium marinum DSM 745 11034422 YP_004775218.1 CDS Cycma_3260 NC_015914.1 3836724 3837104 D hypothetical protein 3836724..3837104 Cyclobacterium marinum DSM 745 11034424 YP_004775219.1 CDS Cycma_3263 NC_015914.1 3838448 3838828 D PFAM: Bacterial mobilisation protein (MobC); Ribbon-helix-helix protein, copG family; SPTR: Mobilization protein; hypothetical protein 3838448..3838828 Cyclobacterium marinum DSM 745 11034427 YP_004775220.1 CDS Cycma_3264 NC_015914.1 3838828 3840330 D PFAM: Relaxase/Mobilisation nuclease domain; InterPro IPR005094; KEGG: bsa:Bacsa_3688 relaxase/mobilization nuclease; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR: uncharacterized protein; Relaxase/mobilization nuclease 3838828..3840330 Cyclobacterium marinum DSM 745 11034428 YP_004775221.1 CDS Cycma_3265 NC_015914.1 3840343 3840987 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; KEGG: bfs:pBF9343.15 ParA-related protein; SPTR: uncharacterized protein; ParA-like protein 3840343..3840987 Cyclobacterium marinum DSM 745 11034429 YP_004775222.1 CDS Cycma_3266 NC_015914.1 3840996 3841316 D hypothetical protein 3840996..3841316 Cyclobacterium marinum DSM 745 11034430 YP_004775223.1 CDS Cycma_3267 NC_015914.1 3841318 3841662 D hypothetical protein 3841318..3841662 Cyclobacterium marinum DSM 745 11034431 YP_004775224.1 CDS Cycma_3268 NC_015914.1 3841664 3841984 D KEGG: bfs:pBF9343.47c plasmid transfer protein; SPTR: uncharacterized protein; plasmid transfer protein 3841664..3841984 Cyclobacterium marinum DSM 745 11034432 YP_004775225.1 CDS Cycma_3269 NC_015914.1 3842039 3842344 D KEGG: bfs:pBF9343.47c plasmid transfer protein; SPTR: Conserved transmembrane protein found in conjugate transposon TraE; plasmid transfer protein 3842039..3842344 Cyclobacterium marinum DSM 745 11034433 YP_004775226.1 CDS Cycma_3270 NC_015914.1 3842344 3842619 D KEGG: bfr:BFp0009 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3842344..3842619 Cyclobacterium marinum DSM 745 11034434 YP_004775227.1 CDS Cycma_3271 NC_015914.1 3842627 3845125 D PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: bfr:BF2797 hypothetical protein; SPTR: uncharacterized protein; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; conjugation system ATPase, TraG family 3842627..3845125 Cyclobacterium marinum DSM 745 11034435 YP_004775228.1 CDS Cycma_3272 NC_015914.1 3845137 3845796 D KEGG: bfr:BFp0011 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3845137..3845796 Cyclobacterium marinum DSM 745 11034436 YP_004775229.1 CDS Cycma_3273 NC_015914.1 3845800 3846447 D KEGG: bfs:pBF9343.44c plasmid transfer protein; SPTR: uncharacterized protein; hypothetical protein 3845800..3846447 Cyclobacterium marinum DSM 745 11034437 YP_004775230.1 CDS Cycma_3274 NC_015914.1 3846444 3847103 D SPTR: uncharacterized protein; hypothetical protein 3846444..3847103 Cyclobacterium marinum DSM 745 11034438 YP_004775231.1 CDS Cycma_3275 NC_015914.1 3847100 3847900 D SPTR: uncharacterized protein; hypothetical protein 3847100..3847900 Cyclobacterium marinum DSM 745 11034439 YP_004775232.1 CDS Cycma_3276 NC_015914.1 3847897 3849069 D KEGG: bfs:pBF9343.42c plasmid transfer protein; SPTR: TraJ family protein conjugative transposon; plasmid transfer protein 3847897..3849069 Cyclobacterium marinum DSM 745 11034440 YP_004775233.1 CDS Cycma_3277 NC_015914.1 3849081 3849692 D TIGRFAM: Bacteroides conjugative transposon TraK protein; KEGG: bsa:Bacsa_3656 conjugative transposon TraK protein; SPTR: plasmid transfer protein; TIGRFAM: Bacteroides conjugative transposon TraK protein; conjugative transposon TraK protein 3849081..3849692 Cyclobacterium marinum DSM 745 11034441 YP_004775234.1 CDS Cycma_3278 NC_015914.1 3849670 3850110 D SPTR: uncharacterized protein; hypothetical protein 3849670..3850110 Cyclobacterium marinum DSM 745 11034442 YP_004775235.1 CDS Cycma_3279 NC_015914.1 3850100 3851305 D PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein; KEGG: bsa:Bacsa_3658 conjugative transposon TraM protein; SPTR: Conserved protein found in conjugate transposon TraM; TIGRFAM: Bacteroides conjugative transposon TraM protein; conjugative transposon TraM protein 3850100..3851305 Cyclobacterium marinum DSM 745 11034443 YP_004775236.1 CDS Cycma_3280 NC_015914.1 3851310 3852152 D TIGRFAM: Bacteroides conjugative transposon TraN protein; KEGG: bsa:Bacsa_3439 conjugative transposon TraN protein; SPTR: Bacteroides conjugative transposon TraN protein; TIGRFAM: Bacteroides conjugative transposon TraN protein; conjugative transposon TraN protein 3851310..3852152 Cyclobacterium marinum DSM 745 11034444 YP_004775237.1 CDS Cycma_3281 NC_015914.1 3852419 3854401 D PFAM: Type IV secretion-system coupling protein DNA-binding domain; KEGG: bsa:Bacsa_3678 plasmid transfer protein; SPTR: plasmid transfer protein; plasmid transfer protein 3852419..3854401 Cyclobacterium marinum DSM 745 11034445 YP_004775238.1 CDS Cycma_3282 NC_015914.1 3854433 3854612 D hypothetical protein 3854433..3854612 Cyclobacterium marinum DSM 745 11034446 YP_004775239.1 CDS Cycma_3283 NC_015914.1 3854602 3855651 D PFAM: Domain of unknown function (DUF1738); COGs: COG4227 Antirestriction protein; InterPro IPR013610; KEGG: adn:Alide_4424 hypothetical protein; PFAM: Domain of unknown function DUF1738; SPTR: uncharacterized protein; hypothetical protein 3854602..3855651 Cyclobacterium marinum DSM 745 11034447 YP_004775240.1 CDS Cycma_3284 NC_015914.1 3855651 3856562 D KEGG: bsa:Bacsa_3668 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3855651..3856562 Cyclobacterium marinum DSM 745 11034448 YP_004775241.1 CDS Cycma_3285 NC_015914.1 3856537 3857187 D SPTR: uncharacterized protein; hypothetical protein 3856537..3857187 Cyclobacterium marinum DSM 745 11034449 YP_004775242.1 CDS Cycma_3286 NC_015914.1 3857301 3857792 D hypothetical protein 3857301..3857792 Cyclobacterium marinum DSM 745 11034450 YP_004775243.1 CDS Cycma_3287 NC_015914.1 3857870 3858832 R SPTR: uncharacterized protein; hypothetical protein complement(3857870..3858832) Cyclobacterium marinum DSM 745 11034451 YP_004775244.1 CDS Cycma_3288 NC_015914.1 3860349 3861002 D PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: sli:Slin_0523 DNA repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; DNA repair protein RadC 3860349..3861002 Cyclobacterium marinum DSM 745 11034452 YP_004775245.1 CDS Cycma_3289 NC_015914.1 3861082 3861423 R hypothetical protein complement(3861082..3861423) Cyclobacterium marinum DSM 745 11034453 YP_004775246.1 CDS Cycma_3290 NC_015914.1 3861645 3861872 D KEGG: shg:Sph21_1217 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3861645..3861872 Cyclobacterium marinum DSM 745 11034454 YP_004775247.1 CDS Cycma_3291 NC_015914.1 3862198 3863094 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pdi:BDI_3256 transposase; PFAM: Transposase, IS4-like; SPTR: ISPg3, transposase; transposase IS4 family protein complement(3862198..3863094) Cyclobacterium marinum DSM 745 11034455 YP_004775248.1 CDS Cycma_3293 NC_015914.1 3864318 3866210 D KEGG: hypothetical protein; SPTR: GUN4 domain protein; hypothetical protein 3864318..3866210 Cyclobacterium marinum DSM 745 11034457 YP_004775249.1 CDS Cycma_3294 NC_015914.1 3866207 3867535 D PFAM: Archaeal ATPase; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3866207..3867535 Cyclobacterium marinum DSM 745 11034458 YP_004775250.1 CDS Cycma_3295 NC_015914.1 3868379 3868753 R hypothetical protein complement(3868379..3868753) Cyclobacterium marinum DSM 745 11034459 YP_004775251.1 CDS Cycma_3296 NC_015914.1 3868934 3869161 D KEGG: shg:Sph21_1217 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3868934..3869161 Cyclobacterium marinum DSM 745 11034460 YP_004775252.1 CDS Cycma_3297 NC_015914.1 3869460 3869756 D hypothetical protein 3869460..3869756 Cyclobacterium marinum DSM 745 11034461 YP_004775253.1 CDS Cycma_3298 NC_015914.1 3869930 3870340 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3869930..3870340 Cyclobacterium marinum DSM 745 11034462 YP_004775254.1 CDS Cycma_3299 NC_015914.1 3870318 3870761 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3870318..3870761 Cyclobacterium marinum DSM 745 11034463 YP_004775255.1 CDS Cycma_3300 NC_015914.1 3870764 3871231 D PFAM: Preprotein translocase subunit SecB; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3870764..3871231 Cyclobacterium marinum DSM 745 11034464 YP_004775256.1 CDS Cycma_3301 NC_015914.1 3871815 3873383 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR004546; KEGG: sua:Saut_1346 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; SPTR: Type I restriction-modification system, M subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; type I restriction-modification system, M subunit 3871815..3873383 Cyclobacterium marinum DSM 745 11034465 YP_004775257.1 CDS Cycma_3302 NC_015914.1 3873387 3874640 D PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: hse:Hsero_4560 type I site-specific deoxyribonuclease specificity subunit; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I restriction enzyme, S subunit; restriction modification system DNA specificity domain-containing protein 3873387..3874640 Cyclobacterium marinum DSM 745 11034466 YP_004775258.1 CDS Cycma_3303 NC_015914.1 3874640 3874828 D hypothetical protein 3874640..3874828 Cyclobacterium marinum DSM 745 11034467 YP_004775259.1 CDS Cycma_3304 NC_015914.1 3874825 3875775 D PFAM: Abi-like protein; COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: chu:CHU_3671 hypothetical protein; PFAM: Abortive infection bacteriophage resistance related; SPTR: uncharacterized protein; Abi family protein 3874825..3875775 Cyclobacterium marinum DSM 745 11034468 YP_004775260.1 CDS Cycma_3305 NC_015914.1 3875772 3878636 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR007409:IPR006935:IPR014001:IPR004473; KEGG: dfe:Dfer_5242 type I site-specific deoxyribonuclease, HsdR family; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: Type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; HsdR family type I site-specific deoxyribonuclease 3875772..3878636 Cyclobacterium marinum DSM 745 11034469 YP_004775261.1 CDS Cycma_3306 NC_015914.1 3878886 3878996 D hypothetical protein 3878886..3878996 Cyclobacterium marinum DSM 745 11034470 YP_004775262.1 CDS Cycma_3307 NC_015914.1 3879083 3880585 D PFAM: KAP family P-loop domain; InterPro IPR011646; KEGG: fba:FIC_00908 hypothetical protein; PFAM: KAP P-loop; SPTR: uncharacterized protein; KAP P-loop domain-containing protein 3879083..3880585 Cyclobacterium marinum DSM 745 11034471 YP_004775263.1 CDS Cycma_3308 NC_015914.1 3880887 3880997 R hypothetical protein complement(3880887..3880997) Cyclobacterium marinum DSM 745 11034472 YP_004775264.1 CDS Cycma_3309 NC_015914.1 3881038 3881712 D PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: bsu:BSU20490 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: uncharacterized protein; hypothetical protein 3881038..3881712 Cyclobacterium marinum DSM 745 11034473 YP_004775265.1 CDS Cycma_3310 NC_015914.1 3882140 3882397 D hypothetical protein 3882140..3882397 Cyclobacterium marinum DSM 745 11034474 YP_004775266.1 CDS Cycma_3311 NC_015914.1 3882443 3882586 R hypothetical protein complement(3882443..3882586) Cyclobacterium marinum DSM 745 11034475 YP_004775267.1 CDS Cycma_3312 NC_015914.1 3882604 3883467 R KEGG: bid:Bind_1439 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3882604..3883467) Cyclobacterium marinum DSM 745 11034476 YP_004775268.1 CDS Cycma_3313 NC_015914.1 3883851 3884012 R hypothetical protein complement(3883851..3884012) Cyclobacterium marinum DSM 745 11034477 YP_004775269.1 CDS Cycma_3314 NC_015914.1 3884314 3884571 D hypothetical protein 3884314..3884571 Cyclobacterium marinum DSM 745 11034478 YP_004775270.1 CDS Cycma_3315 NC_015914.1 3884864 3885859 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 3884864..3885859 Cyclobacterium marinum DSM 745 11034479 YP_004775271.1 CDS Cycma_3316 NC_015914.1 3886125 3886256 D hypothetical protein 3886125..3886256 Cyclobacterium marinum DSM 745 11034480 YP_004775272.1 CDS Cycma_3317 NC_015914.1 3886484 3886924 R SPTR: uncharacterized protein; hypothetical protein complement(3886484..3886924) Cyclobacterium marinum DSM 745 11034481 YP_004775273.1 CDS Cycma_3318 NC_015914.1 3886896 3888065 R KEGG: sli:Slin_4859 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3886896..3888065) Cyclobacterium marinum DSM 745 11034482 YP_004775274.1 CDS Cycma_3319 NC_015914.1 3888062 3888829 R KEGG: amt:Amet_0199 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3888062..3888829) Cyclobacterium marinum DSM 745 11034483 YP_004775275.1 CDS Cycma_3320 NC_015914.1 3888835 3889062 R PFAM: Uncharacterized protein conserved in bacteria (DUF2188); KEGG: maq:Maqu_1259 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3888835..3889062) Cyclobacterium marinum DSM 745 11034484 YP_004775276.1 CDS Cycma_3321 NC_015914.1 3889307 3890362 D PFAM: Helix-turn-helix; Domain of unknown function (DUF955); COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359; KEGG: psn:Pedsa_1879 protein of unknown function DUF955; PFAM: Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; hypothetical protein 3889307..3890362 Cyclobacterium marinum DSM 745 11034485 YP_004775277.1 CDS Cycma_3322 NC_015914.1 3890362 3890868 D KEGG: psn:Pedsa_1878 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3890362..3890868 Cyclobacterium marinum DSM 745 11034486 YP_004775278.1 CDS Cycma_3323 NC_015914.1 3891252 3891350 R hypothetical protein complement(3891252..3891350) Cyclobacterium marinum DSM 745 11034487 YP_004775279.1 CDS Cycma_3325 NC_015914.1 3892958 3893896 R KEGG: bhl:Bache_1421 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3892958..3893896) Cyclobacterium marinum DSM 745 11034489 YP_004775280.1 CDS Cycma_3326 NC_015914.1 3894180 3894845 D PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: shg:Sph21_2466 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; TetR family transcriptional regulator 3894180..3894845 Cyclobacterium marinum DSM 745 11034490 YP_004775281.1 CDS Cycma_3327 NC_015914.1 3895530 3898343 D PFAM: TonB dependent receptor; InterPro IPR000531; KEGG: dfe:Dfer_2379 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor 3895530..3898343 Cyclobacterium marinum DSM 745 11034491 YP_004775282.1 CDS Cycma_3328 NC_015914.1 3898613 3899356 D PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: dfe:Dfer_2378 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: uncharacterized protein; hypothetical protein 3898613..3899356 Cyclobacterium marinum DSM 745 11034492 YP_004775283.1 CDS Cycma_3329 NC_015914.1 3900095 3900817 D PFAM: 4'-phosphopantetheinyl transferase superfamily; COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: bte:BTH_II1676 4-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: 4-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 3900095..3900817 Cyclobacterium marinum DSM 745 11034493 YP_004775284.1 CDS Cycma_3330 NC_015914.1 3901373 3901630 D hypothetical protein 3901373..3901630 Cyclobacterium marinum DSM 745 11034494 YP_004775285.1 CDS Cycma_3331 NC_015914.1 3901867 3902106 D hypothetical protein 3901867..3902106 Cyclobacterium marinum DSM 745 11034495 YP_004775286.1 CDS Cycma_3332 NC_015914.1 3902185 3902412 R hypothetical protein complement(3902185..3902412) Cyclobacterium marinum DSM 745 11034496 YP_004775287.1 CDS Cycma_3333 NC_015914.1 3902598 3903473 R hypothetical protein complement(3902598..3903473) Cyclobacterium marinum DSM 745 11034497 YP_004775288.1 CDS Cycma_3334 NC_015914.1 3903491 3904810 R PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: pgi:PG0838 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Site-specific recombinase, phage integrase; integrase complement(3903491..3904810) Cyclobacterium marinum DSM 745 11034498 YP_004775289.1 CDS Cycma_3335 NC_015914.1 3905597 3905845 D hypothetical protein 3905597..3905845 Cyclobacterium marinum DSM 745 11034499 YP_004775290.1 CDS Cycma_3336 NC_015914.1 3905946 3906368 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; KEGG: bth:BT_3673 TonB; SPTR: TonB; hypothetical protein 3905946..3906368 Cyclobacterium marinum DSM 745 11034500 YP_004775291.1 CDS Cycma_3337 NC_015914.1 3906798 3907166 D hypothetical protein 3906798..3907166 Cyclobacterium marinum DSM 745 11034501 YP_004775292.1 CDS Cycma_3338 NC_015914.1 3907420 3908592 R PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: sli:Slin_1591 glucose/sorbosone dehydrogenase; SPTR: Protein up-regulated by thyroid hormone- PQQ-dependent glucose dehydrogenase; glucose/sorbosone dehydrogenase complement(3907420..3908592) Cyclobacterium marinum DSM 745 11034502 YP_004775293.1 CDS Cycma_3339 NC_015914.1 3908832 3909743 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mab:MAB_4696c methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase; type 11 methyltransferase complement(3908832..3909743) Cyclobacterium marinum DSM 745 11034503 YP_004775294.1 CDS Cycma_3340 NC_015914.1 3910591 3911406 D PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: mtt:Ftrac_0618 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 3910591..3911406 Cyclobacterium marinum DSM 745 11034504 YP_004775295.1 CDS Cycma_3341 NC_015914.1 3911466 3911795 D KEGG: mtt:Ftrac_0617 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3911466..3911795 Cyclobacterium marinum DSM 745 11034505 YP_004775296.1 CDS Cycma_3342 NC_015914.1 3911797 3912435 D PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: mtt:Ftrac_0616 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Membrane protein; biopolymer transport protein ExbD/TolR 3911797..3912435 Cyclobacterium marinum DSM 745 11034506 YP_004775297.1 CDS Cycma_3343 NC_015914.1 3912437 3912898 D PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: mtt:Ftrac_0615 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Membrane protein; biopolymer transport protein ExbD/TolR 3912437..3912898 Cyclobacterium marinum DSM 745 11034507 YP_004775298.1 CDS Cycma_3344 NC_015914.1 3913120 3914607 D PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: mtt:Ftrac_1341 rhodanese domain protein; SPTR: Metallo-beta-lactamase superfamily protein; rhodanese domain-containing protein 3913120..3914607 Cyclobacterium marinum DSM 745 11034508 YP_004775299.1 CDS Cycma_3345 NC_015914.1 3914819 3915400 D PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: dfe:Dfer_3116 protein of unknown function DUF395 YeeE/YedE; PFAM: Protein of unknown function DUF395, YeeE/YedE; SPTR: YeeE/YedE family protein; hypothetical protein 3914819..3915400 Cyclobacterium marinum DSM 745 11034509 YP_004775300.1 CDS Cycma_3346 NC_015914.1 3915427 3915918 D PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: lby:Lbys_0966 hypothetical protein; PFAM: Protein of unknown function DUF395, YeeE/YedE; SPTR: Transporter component; hypothetical protein 3915427..3915918 Cyclobacterium marinum DSM 745 11034510 YP_004775301.1 CDS Cycma_3347 NC_015914.1 3916153 3919713 R PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395:IPR011890; KEGG: mtt:Ftrac_0067 chromosome segregation protein smc; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: SMC family protein; TIGRFAM: Chromosome segregation protein SMC; chromosome segregation protein SMC complement(3916153..3919713) Cyclobacterium marinum DSM 745 11034511 YP_004775302.1 CDS Cycma_3348 NC_015914.1 3920211 3920672 D PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: tte:TTE0840 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: uncharacterized protein; hypothetical protein 3920211..3920672 Cyclobacterium marinum DSM 745 11034512 YP_004775303.1 CDS Cycma_3349 NC_015914.1 3920800 3921333 R PFAM: AhpC/TSA family; KEGG: abi:Aboo_0883 peroxiredoxin; SPTR: Probable peroxiredoxin 1; hypothetical protein complement(3920800..3921333) Cyclobacterium marinum DSM 745 11034513 YP_004775304.1 CDS Cycma_3350 NC_015914.1 3921623 3922129 D KEGG: mtt:Ftrac_0070 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3921623..3922129 Cyclobacterium marinum DSM 745 11034514 YP_004775305.1 CDS Cycma_3351 NC_015914.1 3922179 3923375 D PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: phe:Phep_1689 natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; SPTR: Natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 3922179..3923375 Cyclobacterium marinum DSM 745 11034515 YP_004775306.1 CDS Cycma_3352 NC_015914.1 3923458 3924474 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: phe:Phep_1690 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3923458..3924474 Cyclobacterium marinum DSM 745 11034516 YP_004775307.1 CDS Cycma_3353 NC_015914.1 3924485 3925546 D KEGG: gym:GYMC10_0510 dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 3924485..3925546 Cyclobacterium marinum DSM 745 11034517 YP_004775308.1 CDS Cycma_3354 NC_015914.1 3925551 3927308 R PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal; KEGG: bth:BT_3608 hypothetical protein; SPTR: Sialidase; hypothetical protein complement(3925551..3927308) Cyclobacterium marinum DSM 745 11034518 YP_004775309.1 CDS Cycma_3355 NC_015914.1 3927507 3929642 D KEGG: shg:Sph21_0105 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 3927507..3929642 Cyclobacterium marinum DSM 745 11034519 YP_004775310.1 CDS Cycma_3356 NC_015914.1 3929892 3930602 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: sli:Slin_0438 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein complement(3929892..3930602) Cyclobacterium marinum DSM 745 11034520 YP_004775311.1 CDS Cycma_3357 NC_015914.1 3930627 3932015 R PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: sli:Slin_0602 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3930627..3932015) Cyclobacterium marinum DSM 745 11034521 YP_004775312.1 CDS Cycma_3358 NC_015914.1 3932043 3932717 R PFAM: Trehalose utilisation; KEGG: psl:Psta_2160 NHL repeat containing protein; SPTR: uncharacterized protein; NHL repeat containing protein complement(3932043..3932717) Cyclobacterium marinum DSM 745 11034522 YP_004775313.1 CDS Cycma_3359 NC_015914.1 3932723 3934108 R KEGG: ach:Achl_0457 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3932723..3934108) Cyclobacterium marinum DSM 745 11034523 YP_004775314.1 CDS Cycma_3360 NC_015914.1 3934242 3935561 R PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR006638:IPR005839:IPR 006467; KEGG: mtt:Ftrac_0063 MiaB-like tRNA modifying enzyme; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; MiaB-like tRNA modifying protein complement(3934242..3935561) Cyclobacterium marinum DSM 745 11034524 YP_004775315.1 CDS Cycma_3361 NC_015914.1 3935662 3935778 D hypothetical protein 3935662..3935778 Cyclobacterium marinum DSM 745 11034525 YP_004775316.1 CDS Cycma_3362 NC_015914.1 3935795 3937957 D PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: mtt:Ftrac_0061 glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic region; SPTR: Glutamine synthetase; glutamine synthetase 3935795..3937957 Cyclobacterium marinum DSM 745 11034526 YP_004775317.1 CDS Cycma_3363 NC_015914.1 3938094 3938564 R hypothetical protein complement(3938094..3938564) Cyclobacterium marinum DSM 745 11034527 YP_004775318.1 CDS Cycma_3364 NC_015914.1 3938664 3939671 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: gfo:GFO_1709 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Zinc-type alcohol dehydrogenase; molecular chaperone GroES complement(3938664..3939671) Cyclobacterium marinum DSM 745 11034528 YP_004775319.1 CDS Cycma_3365 NC_015914.1 3939793 3941763 R KEGG: transglutaminase domain-containing protein; SPTR: uncharacterized protein; hypothetical protein complement(3939793..3941763) Cyclobacterium marinum DSM 745 11034529 YP_004775320.1 CDS Cycma_3366 NC_015914.1 3941768 3943594 R PFAM: Transglutaminase-like superfamily; KEGG: cpi:Cpin_4000 transglutaminase domain protein; SPTR: uncharacterized protein; hypothetical protein complement(3941768..3943594) Cyclobacterium marinum DSM 745 11034530 YP_004775321.1 CDS Cycma_3367 NC_015914.1 3943944 3944960 D PFAM: Malate/L-lactate dehydrogenase; COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: psn:Pedsa_2698 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; SPTR: 2,3-diketo-L-gulonate reductase; malate/L-lactate dehydrogenase 3943944..3944960 Cyclobacterium marinum DSM 745 11034531 YP_004775322.1 CDS Cycma_3368 NC_015914.1 3945148 3948006 R PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain; InterPro IPR013737:IPR008902; KEGG: sli:Slin_1249 alpha-L-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; SPTR: Alpha-L-rhamnosidase; alpha-L-rhamnosidase complement(3945148..3948006) Cyclobacterium marinum DSM 745 11034532 YP_004775323.1 CDS Cycma_3369 NC_015914.1 3948128 3949633 R PFAM: Pyruvate kinase, barrel domain; COGs: COG0469 Pyruvate kinase; InterPro IPR015793; KEGG: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; SPTR: Pyruvate kinase; pyruvate kinase barrel complement(3948128..3949633) Cyclobacterium marinum DSM 745 11034533 YP_004775324.1 CDS Cycma_3370 NC_015914.1 3949805 3951187 R PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: shg:Sph21_3587 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Metallo-beta-lactamase; rhodanese-like protein complement(3949805..3951187) Cyclobacterium marinum DSM 745 11034534 YP_004775325.1 CDS Cycma_3371 NC_015914.1 3951775 3951996 D PFAM: FeoA domain; InterPro IPR007167; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: Ferrous iron transport protein B; FeoA family protein 3951775..3951996 Cyclobacterium marinum DSM 745 11034535 YP_004775326.1 CDS Cycma_3372 NC_015914.1 3952000 3954111 D PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR003373:IPR002917:IPR011619:IPR 011642:IPR011640; KEGG: shg:Sph21_2200 ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; ferrous iron transport protein B 3952000..3954111 Cyclobacterium marinum DSM 745 11034536 YP_004775327.1 CDS Cycma_3373 NC_015914.1 3954285 3955763 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: zpr:ZPR_4344 multidrug resistance protein, FusA/NodT family protein; PFAM: Outer membrane efflux protein; SPTR: Multidrug resistance protein, FusA/NodT family protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(3954285..3955763) Cyclobacterium marinum DSM 745 11034537 YP_004775328.1 CDS Cycma_3374 NC_015914.1 3955777 3958932 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: lby:Lbys_1748 transporter, hydrophobe/amphiphile efflux-1 (hae1) family; PFAM: Acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3955777..3958932) Cyclobacterium marinum DSM 745 11034538 YP_004775329.1 CDS Cycma_3375 NC_015914.1 3958978 3960123 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: lby:Lbys_1747 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(3958978..3960123) Cyclobacterium marinum DSM 745 11034539 YP_004775330.1 CDS Cycma_3376 NC_015914.1 3960791 3962443 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3960791..3962443) Cyclobacterium marinum DSM 745 11034540 YP_004775331.1 CDS Cycma_3377 NC_015914.1 3962926 3963582 R KEGG: zpr:ZPR_1596 hypothetical protein; SPTR: Membrane protein; hypothetical protein complement(3962926..3963582) Cyclobacterium marinum DSM 745 11034541 YP_004775332.1 CDS Cycma_3378 NC_015914.1 3963584 3964099 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: cpi:Cpin_0328 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(3963584..3964099) Cyclobacterium marinum DSM 745 11034542 YP_004775333.1 CDS Cycma_3379 NC_015914.1 3964399 3965403 R PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR016048; KEGG: phe:Phep_2368 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Bacterial luciferase; TIGRFAM: Luciferase oxidoreductase, group 1; luciferase oxidoreductase, group 1 complement(3964399..3965403) Cyclobacterium marinum DSM 745 11034543 YP_004775334.1 CDS Cycma_3380 NC_015914.1 3965645 3966736 R PFAM: NADH:flavin oxidoreductase / NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: mtt:Ftrac_1385 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; SPTR: NADH-dependent flavin oxidoreductase, Oye family; NADH:flavin oxidoreductase complement(3965645..3966736) Cyclobacterium marinum DSM 745 11034544 YP_004775335.1 CDS Cycma_3381 NC_015914.1 3967131 3970823 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918; KEGG: osp:Odosp_0565 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; SPTR: Phosphoribosylformylglycinamidine synthase; AIR synthase-like protein domain-containing protein complement(3967131..3970823) Cyclobacterium marinum DSM 745 11034545 YP_004775336.1 CDS Cycma_3382 NC_015914.1 3971169 3971774 D PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: mtt:Ftrac_0547 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: transcriptional regulator, TetR family; TetR family transcriptional regulator 3971169..3971774 Cyclobacterium marinum DSM 745 11034546 YP_004775337.1 CDS Cycma_3383 NC_015914.1 3971847 3973073 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: shg:Sph21_0683 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase domain protein; transposase IS4 family protein complement(3971847..3973073) Cyclobacterium marinum DSM 745 11034547 YP_004775338.1 CDS Cycma_3384 NC_015914.1 3973234 3974580 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_0546 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane protein; outer membrane efflux protein 3973234..3974580 Cyclobacterium marinum DSM 745 11034548 YP_004775339.1 CDS Cycma_3385 NC_015914.1 3974595 3975734 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: mtt:Ftrac_0545 efflux transporter, rnd family, mfp subunit; PFAM: Biotin/lipoyl attachment; SPTR: Cation efflux system protein/acriflavin resistance protein B family protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3974595..3975734 Cyclobacterium marinum DSM 745 11034549 YP_004775340.1 CDS Cycma_3386 NC_015914.1 3975742 3979149 D PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_0544 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Cation/multidrug efflux pump; acriflavin resistance protein 3975742..3979149 Cyclobacterium marinum DSM 745 11034550 YP_004775341.1 CDS Cycma_3387 NC_015914.1 3979246 3979953 R PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: fjo:Fjoh_1120 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; SPTR: L-ribulose-5-phosphate 4-epimerase; class II aldolase/adducin family protein complement(3979246..3979953) Cyclobacterium marinum DSM 745 11034551 YP_004775342.1 CDS Cycma_3388 NC_015914.1 3980186 3981661 D PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; COGs: COG2160 L-arabinose isomerase; HAMAP: L-arabinose isomerase; InterPro IPR003762; KEGG: cpi:Cpin_3996 L-arabinose isomerase; PFAM: L-arabinose isomerase; SPTR: L-arabinose isomerase; L-arabinose isomerase 3980186..3981661 Cyclobacterium marinum DSM 745 11034552 YP_004775343.1 CDS Cycma_3389 NC_015914.1 3981891 3982715 R InterPro IPR006016; KEGG: ran:Riean_0358 hypothetical protein; PFAM: UspA; SPTR: uncharacterized protein; UspA domain-containing protein complement(3981891..3982715) Cyclobacterium marinum DSM 745 11034553 YP_004775344.1 CDS Cycma_3390 NC_015914.1 3982943 3983272 R PFAM: High potential iron-sulfur protein; KEGG: phe:Phep_0333 hypothetical protein; SPTR: High-potential iron-sulfur protein; hypothetical protein complement(3982943..3983272) Cyclobacterium marinum DSM 745 11034554 YP_004775345.1 CDS Cycma_3391 NC_015914.1 3983352 3985265 R TIGRFAM: membrane-bound dehydrogenase domain; InterPro IPR013428; KEGG: phe:Phep_0332 membrane-bound dehydrogenase domain-containing protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; membrane-bound dehydrogenase domain-containing protein complement(3983352..3985265) Cyclobacterium marinum DSM 745 11034555 YP_004775346.1 CDS Cycma_3392 NC_015914.1 3985390 3987789 R PFAM: Dienelactone hydrolase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR008391; KEGG: phe:Phep_0353 signal peptide; PFAM: Acetyl xylan esterase; SPTR: Signal peptide; acetyl xylan esterase complement(3985390..3987789) Cyclobacterium marinum DSM 745 11034556 YP_004775347.1 CDS Cycma_3393 NC_015914.1 3988278 3990497 D PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; InterPro IPR004131; KEGG: mtt:Ftrac_0768 v-type h(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; SPTR: K(+)-stimulated pyrophosphate-energized sodium pump; TIGRFAM: Inorganic H+ pyrophosphatase; pyrophosphate-energized proton pump 3988278..3990497 Cyclobacterium marinum DSM 745 11034557 YP_004775348.1 CDS Cycma_3394 NC_015914.1 3990875 3991882 D PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: phe:Phep_1245 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 3990875..3991882 Cyclobacterium marinum DSM 745 11034558 YP_004775349.1 CDS Cycma_3395 NC_015914.1 3991939 3992292 R PFAM: Hpt domain; KEGG: sli:Slin_3142 multi-sensor hybrid histidine kinase; SPTR: Multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(3991939..3992292) Cyclobacterium marinum DSM 745 11034559 YP_004775350.1 CDS Cycma_3396 NC_015914.1 3992441 3994705 D PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641:IPR018974:IPR003029; KEGG: mtt:Ftrac_0657 tex-like protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SPTR: S1 RNA binding domain protein; Tex-like protein 3992441..3994705 Cyclobacterium marinum DSM 745 11034560 YP_004775351.1 CDS Cycma_3397 NC_015914.1 3994868 3995125 D hypothetical protein 3994868..3995125 Cyclobacterium marinum DSM 745 11034561 YP_004775352.1 CDS Cycma_3398 NC_015914.1 3995122 3995895 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: mtt:Ftrac_3516 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3995122..3995895 Cyclobacterium marinum DSM 745 11034562 YP_004775353.1 CDS Cycma_3399 NC_015914.1 3995908 3996669 R KEGG: dfe:Dfer_1214 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3995908..3996669) Cyclobacterium marinum DSM 745 11034563 YP_004775354.1 CDS Cycma_3400 NC_015914.1 3996827 3997447 D PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3751 proline hydroxylase; InterPro IPR006620:IPR005123; KEGG: ppf:Pput_5066 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 3996827..3997447 Cyclobacterium marinum DSM 745 11034564 YP_004775355.1 CDS Cycma_3401 NC_015914.1 3997461 3997880 R KEGG: drt:Dret_0940 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(3997461..3997880) Cyclobacterium marinum DSM 745 11034565 YP_004775356.1 CDS Cycma_3402 NC_015914.1 3998021 4000081 R PFAM: Anticodon-binding domain; tRNA synthetases class I (M); tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR002304:IPR004495:IPR015413:IPR002547; KEGG: cly:Celly_1732 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; methionyl-tRNA synthetase complement(3998021..4000081) Cyclobacterium marinum DSM 745 11034566 YP_004775357.1 CDS Cycma_3403 NC_015914.1 4000255 4001589 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03955 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A; sulfatase complement(4000255..4001589) Cyclobacterium marinum DSM 745 11034567 YP_004775358.1 CDS Cycma_3404 NC_015914.1 4001821 4003401 D PFAM: Glycosyl hydrolase 20, catalytic domain; Glycosyl hydrolase 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: shg:Sph21_0646 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like; SPTR: Beta-N-acetylhexosaminidase; glycoside hydrolase 4001821..4003401 Cyclobacterium marinum DSM 745 11034568 YP_004775359.1 CDS Cycma_3405 NC_015914.1 4003449 4004750 R PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_04350 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: uncharacterized protein; beta-lactamase complement(4003449..4004750) Cyclobacterium marinum DSM 745 11034569 YP_004775360.1 CDS Cycma_3406 NC_015914.1 4004855 4004965 D hypothetical protein 4004855..4004965 Cyclobacterium marinum DSM 745 11034570 YP_004775361.1 CDS Cycma_3407 NC_015914.1 4005007 4006050 D PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: psn:Pedsa_0760 cation diffusion facilitator family transporter; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter 4005007..4006050 Cyclobacterium marinum DSM 745 11034571 YP_004775362.1 CDS Cycma_3408 NC_015914.1 4006531 4008561 R PFAM: Peptidase M3; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: mtt:Ftrac_2370 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; SPTR: Peptidyl-dipeptidase Dcp; peptidase M3A and M3B thimet/oligopeptidase F complement(4006531..4008561) Cyclobacterium marinum DSM 745 11034572 YP_004775363.1 CDS Cycma_3409 NC_015914.1 4008607 4009140 D KEGG: bcx:BCA_2807 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4008607..4009140 Cyclobacterium marinum DSM 745 11034573 YP_004775364.1 CDS Cycma_3410 NC_015914.1 4009174 4009542 D PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; thioredoxin 4009174..4009542 Cyclobacterium marinum DSM 745 11034574 YP_004775365.1 CDS Cycma_3411 NC_015914.1 4009559 4010038 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4009559..4010038) Cyclobacterium marinum DSM 745 11034575 YP_004775366.1 CDS Cycma_3412 NC_015914.1 4010527 4011327 D PFAM: Peptidase M48; COGs: COG4783 Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: mtt:Ftrac_0977 peptidase M48 ste24p; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family; peptidase M48 Ste24p 4010527..4011327 Cyclobacterium marinum DSM 745 11034576 YP_004775367.1 CDS Cycma_3413 NC_015914.1 4011375 4013789 R PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: mtt:Ftrac_0737 glycoside hydrolase 31; PFAM: Glycoside hydrolase, family 31; SPTR: Glycoside hydrolase 31; glycoside hydrolase complement(4011375..4013789) Cyclobacterium marinum DSM 745 11034577 YP_004775368.1 CDS Cycma_3414 NC_015914.1 4013988 4014347 R hypothetical protein complement(4013988..4014347) Cyclobacterium marinum DSM 745 11034578 YP_004775369.1 CDS Cycma_3415 NC_015914.1 4014632 4016500 R PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: mtt:Ftrac_0568 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Zn-dependent aminopeptidase; peptidase M1 membrane alanine aminopeptidase complement(4014632..4016500) Cyclobacterium marinum DSM 745 11034579 YP_004775370.1 CDS Cycma_3416 NC_015914.1 4016537 4016668 D hypothetical protein 4016537..4016668 Cyclobacterium marinum DSM 745 11034580 YP_004775371.1 CDS Cycma_3417 NC_015914.1 4016706 4018982 D PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: mtt:Ftrac_1001 hypothetical protein; SPTR: Membrane protein; hypothetical protein 4016706..4018982 Cyclobacterium marinum DSM 745 11034581 YP_004775372.1 CDS Cycma_3418 NC_015914.1 4018957 4020012 R PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: chu:CHU_3419 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein complement(4018957..4020012) Cyclobacterium marinum DSM 745 11034582 YP_004775373.1 CDS Cycma_3419 NC_015914.1 4020331 4020900 D PFAM: Protein of unknown function (DUF2911); KEGG: fbc:FB2170_12391 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4020331..4020900 Cyclobacterium marinum DSM 745 11034583 YP_004775374.1 CDS Cycma_3420 NC_015914.1 4020897 4023305 D PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: mtt:Ftrac_1055 peptidase S45 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; SPTR: penicillin G acylase; peptidase S45 penicillin amidase 4020897..4023305 Cyclobacterium marinum DSM 745 11034584 YP_004775375.1 CDS Cycma_3421 NC_015914.1 4023307 4023669 D KEGG: mtt:Ftrac_1054 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4023307..4023669 Cyclobacterium marinum DSM 745 11034585 YP_004775376.1 CDS Cycma_3422 NC_015914.1 4023960 4026134 D PFAM: Trehalose-phosphatase; Glycosyltransferase 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: mtt:Ftrac_2520 trehalose 6-phosphatase; trehalose 6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; SPTR: Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase 4023960..4026134 Cyclobacterium marinum DSM 745 11034586 YP_004775377.1 CDS Cycma_3423 NC_015914.1 4026695 4027408 R PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: shg:Sph21_1028 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; NUDIX hydrolase complement(4026695..4027408) Cyclobacterium marinum DSM 745 11034587 YP_004775378.1 CDS Cycma_3424 NC_015914.1 4028716 4031979 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR000627:IPR012910:IPR000531; KEGG: dfe:Dfer_1683 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Intradiol ring-cleavage dioxygenase, C-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 4028716..4031979 Cyclobacterium marinum DSM 745 11034588 YP_004775379.1 CDS Cycma_3425 NC_015914.1 4032001 4033776 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1684 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4032001..4033776 Cyclobacterium marinum DSM 745 11034589 YP_004775380.1 CDS Cycma_3426 NC_015914.1 4034169 4036034 D PFAM: Heparinase II/III-like protein; KEGG: heparinase II/III family protein; SPTR: uncharacterized protein; heparinase II/III family protein 4034169..4036034 Cyclobacterium marinum DSM 745 11034590 YP_004775381.1 CDS Cycma_3427 NC_015914.1 4036031 4038232 D PFAM: Polysaccharide lyase 8, N terminal alpha-helical domain; Polysaccharide lyase 8, super-sandwich domain; Polysaccharide lyase 8, C-terminal beta-sandwich domain; InterPro IPR012970:IPR003159:IPR004103; KEGG: phe:Phep_0786 polysaccharide lyase 8; PFAM: Polysaccharide lyase 8, central domain; Polysaccharide lyase 8, N-terminal alpha-helical; Polysaccharide lyase 8, C-terminal; SPTR: uncharacterized protein; polysaccharide lyase 8 4036031..4038232 Cyclobacterium marinum DSM 745 11034591 YP_004775382.1 CDS Cycma_3428 NC_015914.1 4038303 4039715 D KEGG: scb:SCAB_0601 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4038303..4039715 Cyclobacterium marinum DSM 745 11034592 YP_004775383.1 CDS Cycma_3429 NC_015914.1 4039883 4042018 D PFAM: Heparinase II/III-like protein; hypothetical protein 4039883..4042018 Cyclobacterium marinum DSM 745 11034593 YP_004775384.1 CDS Cycma_3430 NC_015914.1 4042039 4043991 D PFAM: Heparinase II/III-like protein; KEGG: sli:Slin_2452 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4042039..4043991 Cyclobacterium marinum DSM 745 11034594 YP_004775385.1 CDS Cycma_3431 NC_015914.1 4045059 4045976 D COGs: COG3586 conserved hypothetical protein; KEGG: ter:Tery_3514 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4045059..4045976 Cyclobacterium marinum DSM 745 11034595 YP_004775386.1 CDS Cycma_3432 NC_015914.1 4046369 4047733 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; InterPro IPR003346; KEGG: hypothetical protein; PFAM: Transposase, IS116/IS110/IS902; SPTR: uncharacterized protein; transposase IS116/IS110/IS902 family protein 4046369..4047733 Cyclobacterium marinum DSM 745 11034596 YP_004775387.1 CDS Cycma_3433 NC_015914.1 4047780 4048745 D KEGG: cat:CA2559_00310 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4047780..4048745 Cyclobacterium marinum DSM 745 11034597 YP_004775388.1 CDS Cycma_3434 NC_015914.1 4048873 4050342 D InterPro IPR004843; KEGG: npu:Npun_BR095 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: uncharacterized protein; metallophosphoesterase 4048873..4050342 Cyclobacterium marinum DSM 745 11034598 YP_004775389.1 CDS Cycma_3435 NC_015914.1 4050339 4052666 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0326 Molecular chaperone HSP90 family; KEGG: zin:ZICARI_068 heat shock protein HSP90; SPTR: Chaperone protein htpG; hypothetical protein 4050339..4052666 Cyclobacterium marinum DSM 745 11034599 YP_004775390.1 CDS Cycma_3436 NC_015914.1 4052769 4053467 D hypothetical protein 4052769..4053467 Cyclobacterium marinum DSM 745 11034600 YP_004775391.1 CDS Cycma_3437 NC_015914.1 4053553 4053981 D KEGG: fbc:FB2170_11041 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4053553..4053981 Cyclobacterium marinum DSM 745 11034601 YP_004775392.1 CDS Cycma_3438 NC_015914.1 4054159 4054683 D hypothetical protein 4054159..4054683 Cyclobacterium marinum DSM 745 11034602 YP_004775393.1 CDS Cycma_3439 NC_015914.1 4054652 4054954 D hypothetical protein 4054652..4054954 Cyclobacterium marinum DSM 745 11034603 YP_004775394.1 CDS Cycma_3440 NC_015914.1 4054958 4055305 D PFAM: IS66 Orf2 like protein; InterPro IPR008878; KEGG: zpr:ZPR_3984 transposase orf1, IS66 family protein; PFAM: Transposase (), IS66 Orf2 like; SPTR: Transposase orf1, IS66 family protein; IS66 Orf2 family protein 4054958..4055305 Cyclobacterium marinum DSM 745 11034604 YP_004775395.1 CDS Cycma_3441 NC_015914.1 4055381 4056901 D PFAM: Transposase IS66 family; COGs: COG3436 Transposase and inactivated derivatives; InterPro IPR004291; KEGG: shg:Sph21_5072 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase; transposase IS66 4055381..4056901 Cyclobacterium marinum DSM 745 11034605 YP_004775396.1 CDS Cycma_3442 NC_015914.1 4056984 4057199 D hypothetical protein 4056984..4057199 Cyclobacterium marinum DSM 745 11034606 YP_004775397.1 CDS Cycma_3443 NC_015914.1 4057597 4057839 D SPTR: uncharacterized protein; hypothetical protein 4057597..4057839 Cyclobacterium marinum DSM 745 11034607 YP_004775398.1 CDS Cycma_3446 NC_015914.1 4059221 4059352 D hypothetical protein 4059221..4059352 Cyclobacterium marinum DSM 745 11034609 YP_004775399.1 CDS Cycma_3447 NC_015914.1 4059931 4060326 D KEGG: dfe:Dfer_0503 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4059931..4060326 Cyclobacterium marinum DSM 745 11034610 YP_004775400.1 CDS Cycma_3448 NC_015914.1 4061405 4062925 D PFAM: Transposase DDE domain; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: osp:Odosp_3612 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; transposase IS4 family protein 4061405..4062925 Cyclobacterium marinum DSM 745 11034611 YP_004775401.1 CDS Cycma_3449 NC_015914.1 4063068 4063313 D hypothetical protein 4063068..4063313 Cyclobacterium marinum DSM 745 11034612 YP_004775402.1 CDS Cycma_3451 NC_015914.1 4063881 4064432 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: chu:CHU_3507 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: uncharacterized protein; helix-turn-helix domain-containing protein 4063881..4064432 Cyclobacterium marinum DSM 745 11034614 YP_004775403.1 CDS Cycma_3452 NC_015914.1 4064824 4064955 D hypothetical protein 4064824..4064955 Cyclobacterium marinum DSM 745 11034615 YP_004775404.1 CDS Cycma_3453 NC_015914.1 4065252 4067057 D PFAM: Tetratricopeptide repeat; COGs: COG5616 integral membrane protein; InterPro IPR019734:IPR018060:IPR001440; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Transcriptional regulator, AraC family; hypothetical protein 4065252..4067057 Cyclobacterium marinum DSM 745 11034616 YP_004775405.1 CDS Cycma_3454 NC_015914.1 4067459 4069057 D PFAM: SEC-C motif; Protein of unknown function (DUF1186); InterPro IPR004027; KEGG: zpr:ZPR_0299 hypothetical protein; PFAM: SEC-C motif; SPTR: uncharacterized protein; SEC-C motif domain-containing protein 4067459..4069057 Cyclobacterium marinum DSM 745 11034617 YP_004775406.1 CDS Cycma_3455 NC_015914.1 4069409 4071202 D TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR006626; KEGG: ote:Oter_2913 hypothetical protein; SPTR: secreted protein; hypothetical protein 4069409..4071202 Cyclobacterium marinum DSM 745 11034618 YP_004775407.1 CDS Cycma_3456 NC_015914.1 4072324 4073262 D KEGG: bja:bll0863 hypothetical protein; SPTR: Bll0863 protein; hypothetical protein 4072324..4073262 Cyclobacterium marinum DSM 745 11034619 YP_004775408.1 CDS Cycma_3457 NC_015914.1 4073643 4074254 D KEGG: aha:AHA_2030 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4073643..4074254 Cyclobacterium marinum DSM 745 11034620 YP_004775409.1 CDS Cycma_3458 NC_015914.1 4074789 4075220 D PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: gfo:GFO_0923 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: uncharacterized protein; hypothetical protein 4074789..4075220 Cyclobacterium marinum DSM 745 11034621 YP_004775410.1 CDS Cycma_3459 NC_015914.1 4075223 4075579 D PFAM: Helix-turn-helix; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: gfo:GFO_0922 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Predicted transcription regulator containing helix turn helix domain; XRE family transcriptional regulator 4075223..4075579 Cyclobacterium marinum DSM 745 11034622 YP_004775411.1 CDS Cycma_3460 NC_015914.1 4076195 4076986 R PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0496 acid phosphatase; HAMAP: Multifunctional protein surE; InterPro IPR002828; KEGG: mtt:Ftrac_0928 stationary-phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; bifunctional 5'-3'-nucleotidase/exopolyphosphatase SurE complement(4076195..4076986) Cyclobacterium marinum DSM 745 11034623 YP_004775412.1 CDS Cycma_3461 NC_015914.1 4076986 4077639 R KEGG: mtt:Ftrac_0929 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4076986..4077639) Cyclobacterium marinum DSM 745 11034624 YP_004775413.1 CDS Cycma_3462 NC_015914.1 4077724 4078941 R PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: GTP cyclohydrolase-2; InterPro IPR000422:IPR000926; KEGG: mtt:Ftrac_0930 GTP cyclohydrolase II; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis protein ribBA; TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II; GTP cyclohydrolase-2 complement(4077724..4078941) Cyclobacterium marinum DSM 745 11034625 YP_004775414.1 CDS Cycma_3463 NC_015914.1 4079020 4080957 R PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; COGs: COG0358 DNA primase; InterProIPR006295:IPR002694:IPR006154:IPR013264:IPR 006171; KEGG: mtt:Ftrac_0931 DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG; DNA primase complement(4079020..4080957) Cyclobacterium marinum DSM 745 11034626 YP_004775415.1 CDS Cycma_3464 NC_015914.1 4081355 4082452 D PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; Anion-transporting ATPase; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR002744:IPR019591; KEGG: mtt:Ftrac_0932 ATPase-like, para/MinD; PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; SPTR: ATP-binding protein, Mrp/Nbp35 family; ParA/MinD ATPase-like protein 4081355..4082452 Cyclobacterium marinum DSM 745 11034627 YP_004775416.1 CDS Cycma_3465 NC_015914.1 4082458 4082706 D PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: mtt:Ftrac_0933 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: NifU domain protein; nitrogen-fixing NifU domain-containing protein 4082458..4082706 Cyclobacterium marinum DSM 745 11034628 YP_004775417.1 CDS Cycma_3466 NC_015914.1 4082722 4085742 D PFAM: Pregnancy-associated plasma protein-A; KEGG: mtt:Ftrac_0934 hypothetical protein; SPTR: Ulilysin; hypothetical protein 4082722..4085742 Cyclobacterium marinum DSM 745 11034629 YP_004775418.1 CDS Cycma_3467 NC_015914.1 4085890 4086663 D PFAM: PASTA domain; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: mtt:Ftrac_0936 PASTA domain containing protein; PFAM: PASTA; SMART: PASTA; SPTR: uncharacterized protein; PASTA domain-containing protein 4085890..4086663 Cyclobacterium marinum DSM 745 11034630 YP_004775419.1 CDS Cycma_3468 NC_015914.1 4086664 4088487 D KEGG: mtt:Ftrac_0937 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4086664..4088487 Cyclobacterium marinum DSM 745 11034631 YP_004775420.1 CDS Cycma_3469 NC_015914.1 4088494 4088799 D PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: dfe:Dfer_2923 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Type IV pilus assembly protein PilM; rhodanese-like protein 4088494..4088799 Cyclobacterium marinum DSM 745 11034632 YP_004775421.1 CDS Cycma_3470 NC_015914.1 4088813 4089925 R PFAM: Peptidase M50; InterPro IPR008915; KEGG: mtt:Ftrac_1435 peptidase M50; PFAM: Peptidase M50; SPTR: Peptidase, M50 (S2P protease) family; peptidase M50 complement(4088813..4089925) Cyclobacterium marinum DSM 745 11034633 YP_004775422.1 CDS Cycma_3471 NC_015914.1 4089918 4090547 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006402:IPR005834; KEGG: dfe:Dfer_5618 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD superfamily hydrolase complement(4089918..4090547) Cyclobacterium marinum DSM 745 11034634 YP_004775423.1 CDS Cycma_3472 NC_015914.1 4091293 4093071 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_3216 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase complement(4091293..4093071) Cyclobacterium marinum DSM 745 11034636 YP_004775424.1 CDS Cycma_3473 NC_015914.1 4093834 4095318 D PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: dfe:Dfer_5089 carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: YjeF family protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; hypothetical protein 4093834..4095318 Cyclobacterium marinum DSM 745 11034637 YP_004775425.1 CDS Cycma_3474 NC_015914.1 4095331 4095912 R PFAM: Ribonuclease HII; COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: mtt:Ftrac_1360 RNAse HII; PFAM: Ribonuclease HII/HIII; SPTR: Ribonuclease HII; ribonuclease HII/HIII complement(4095331..4095912) Cyclobacterium marinum DSM 745 11034638 YP_004775426.1 CDS Cycma_3475 NC_015914.1 4095887 4098559 R PFAM: Mannosyl oligosaccharide glucosidase; KEGG: chu:CHU_2813 glucosidase; SPTR: uncharacterized protein; glucosidase complement(4095887..4098559) Cyclobacterium marinum DSM 745 11034639 YP_004775427.1 CDS Cycma_3476 NC_015914.1 4098831 4099946 R PFAM: Glycosyltransferase 28 C-terminal domain; TIGRFAM: conserved hypothetical protein; KEGG: dfe:Dfer_3660 glycosyltransferase; SPTR: uncharacterized protein; glycosyltransferase complement(4098831..4099946) Cyclobacterium marinum DSM 745 11034640 YP_004775428.1 CDS Cycma_3477 NC_015914.1 4099955 4100767 R PFAM: Calcineurin-like phosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: mtt:Ftrac_1844 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Ser/Thr protein phosphatase; metallophosphoesterase complement(4099955..4100767) Cyclobacterium marinum DSM 745 11034641 YP_004775429.1 CDS Cycma_3478 NC_015914.1 4100933 4102276 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594; KEGG: mtt:Ftrac_1848 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Two-component system sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4100933..4102276) Cyclobacterium marinum DSM 745 11034642 YP_004775430.1 CDS Cycma_3479 NC_015914.1 4102266 4103645 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: mtt:Ftrac_1849 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Sigma-54 dependent DNA-binding response regulator SasR; Fis family transcriptional regulator complement(4102266..4103645) Cyclobacterium marinum DSM 745 11034643 YP_004775431.1 CDS Cycma_3480 NC_015914.1 4103846 4104274 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: mtt:Ftrac_1850 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 4103846..4104274 Cyclobacterium marinum DSM 745 11034644 YP_004775432.1 CDS Cycma_3481 NC_015914.1 4104330 4104764 R KEGG: mtt:Ftrac_2177 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4104330..4104764) Cyclobacterium marinum DSM 745 11034645 YP_004775433.1 CDS Cycma_3482 NC_015914.1 4104916 4105755 R KEGG: chu:CHU_0616 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4104916..4105755) Cyclobacterium marinum DSM 745 11034646 YP_004775434.1 CDS Cycma_3483 NC_015914.1 4105730 4106554 R PFAM: Calcineurin-like phosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: mtt:Ftrac_2176 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: UDP-2,3-diacylglucosamine hydrolase; metallophosphoesterase complement(4105730..4106554) Cyclobacterium marinum DSM 745 11034647 YP_004775435.1 CDS Cycma_3484 NC_015914.1 4106688 4108724 R PFAM: Peptidase M41; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR003593:IPR011546:IPR003959:IPR 000642; KEGG: mtt:Ftrac_1834 membrane protease FtsH catalytic subunit; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent zinc metalloprotease FtsH; TIGRFAM: Peptidase M41, FtsH; ATP-dependent metalloprotease FtsH complement(4106688..4108724) Cyclobacterium marinum DSM 745 11034648 YP_004775436.1 CDS Cycma_3485 NC_015914.1 4108793 4109146 R PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: sli:Slin_3002 iojap-like protein; PFAM: Iojap-related protein; SPTR: Iojap-like protein; TIGRFAM: Iojap-related protein; iojap family protein complement(4108793..4109146) Cyclobacterium marinum DSM 745 11034649 YP_004775437.1 CDS Cycma_3486 NC_015914.1 4109248 4110009 D PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143; KEGG: dfe:Dfer_5042 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Biotin-[acetyl-CoA-carboxylase] ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 4109248..4110009 Cyclobacterium marinum DSM 745 11034650 YP_004775438.1 CDS Cycma_3487 NC_015914.1 4110076 4111395 D PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0499 S-adenosylhomocysteine hydrolase; HAMAP: Adenosylhomocysteinase; InterPro IPR000043:IPR015878; KEGG: fbc:FB2170_07534 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; SPTR: Adenosylhomocysteinase; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; adenosylhomocysteinase 4110076..4111395 Cyclobacterium marinum DSM 745 11034651 YP_004775439.1 CDS Cycma_3488 NC_015914.1 4111758 4112147 D PFAM: DoxX; InterPro IPR011637; KEGG: cpi:Cpin_4093 DoxX family protein; PFAM: DoxX; SPTR: DoxX family protein; DoxX family protein 4111758..4112147 Cyclobacterium marinum DSM 745 11034652 YP_004775440.1 CDS Cycma_3489 NC_015914.1 4112158 4112823 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808:IPR000595; KEGG: cly:Celly_3270 Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp family; Crp/Fnr family transcriptional regulator 4112158..4112823 Cyclobacterium marinum DSM 745 11034653 YP_004775441.1 CDS Cycma_3490 NC_015914.1 4112990 4117099 D PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR001789:IPR018060:IPR 011110:IPR011123:IPR000005; KEGG: cpi:Cpin_5544 histidine kinase; PFAM: ATP-binding region, ATPase-like; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Helix-turn-helix, AraC type; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Helix-turn-helix, AraC domain; SPTR: Histidine kinase; histidine kinase 4112990..4117099 Cyclobacterium marinum DSM 745 11034654 YP_004775442.1 CDS Cycma_3491 NC_015914.1 4117089 4119158 D PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: fbc:FB2170_02090 lipoprotein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase 1; coagulation factor 5/8 type domain-containing protein 4117089..4119158 Cyclobacterium marinum DSM 745 11034655 YP_004775443.1 CDS Cycma_3492 NC_015914.1 4119286 4119450 D PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: psm:PSM_A0584 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: UPF0391 membrane protein ADG881_936; hypothetical protein 4119286..4119450 Cyclobacterium marinum DSM 745 11034656 YP_004775444.1 CDS Cycma_3493 NC_015914.1 4119662 4120048 R PFAM: Protein of unknown function (DUF3037); KEGG: fjo:Fjoh_2565 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4119662..4120048) Cyclobacterium marinum DSM 745 11034657 YP_004775445.1 CDS Cycma_3494 NC_015914.1 4120023 4120817 R KEGG: wvi:Weevi_0005 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4120023..4120817) Cyclobacterium marinum DSM 745 11034658 YP_004775446.1 CDS Cycma_3495 NC_015914.1 4121004 4121633 D PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: psn:Pedsa_0209 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SPTR: transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 4121004..4121633 Cyclobacterium marinum DSM 745 11034659 YP_004775447.1 CDS Cycma_3496 NC_015914.1 4121952 4123325 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: psn:Pedsa_0208 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 4121952..4123325 Cyclobacterium marinum DSM 745 11034660 YP_004775448.1 CDS Cycma_3497 NC_015914.1 4123346 4124302 D PFAM: HlyD family secretion protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089; KEGG: secretion protein HlyD family protein; PFAM: Biotin/lipoyl attachment; SPTR: ABC superfamily ATP binding cassette transporter membrane protein; biotin/lipoyl attachment domain-containing protein 4123346..4124302 Cyclobacterium marinum DSM 745 11034661 YP_004775449.1 CDS Cycma_3498 NC_015914.1 4124309 4125469 D PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: fps:FP0294 ABC transporter permease; PFAM: ABC-2 type transporter; SPTR: ABC superfamily ATP binding cassette transporter permease; ABC transporter 4124309..4125469 Cyclobacterium marinum DSM 745 11034662 YP_004775450.1 CDS Cycma_3499 NC_015914.1 4125530 4127584 R PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: npu:Npun_R3418 peptidase S45, penicillin amidase; PFAM: Peptidase S45, penicillin amidase; SPTR: Peptidase S45, penicillin amidase; peptidase S45 penicillin amidase complement(4125530..4127584) Cyclobacterium marinum DSM 745 11034663 YP_004775451.1 CDS Cycma_3500 NC_015914.1 4127665 4128492 R PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; COGs: COG3384 conserved hypothetical protein; InterPro IPR004183; KEGG: fjo:Fjoh_3243 extradiol ring-cleavage dioxygenase III subunit B; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; SPTR: uncharacterized protein; extradiol ring-cleavage dioxygenase class III protein subunit B complement(4127665..4128492) Cyclobacterium marinum DSM 745 11034664 YP_004775452.1 CDS Cycma_3501 NC_015914.1 4128896 4129093 R KEGG: phe:Phep_1520 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4128896..4129093) Cyclobacterium marinum DSM 745 11034665 YP_004775453.1 CDS Cycma_3502 NC_015914.1 4129083 4129922 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: phe:Phep_1519 type 11 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; type 11 methyltransferase complement(4129083..4129922) Cyclobacterium marinum DSM 745 11034666 YP_004775454.1 CDS Cycma_3503 NC_015914.1 4130469 4131077 R PFAM: Protein of unknown function (DUF975); COGs: COG5523 integral membrane protein; InterPro IPR010380; KEGG: pjd:Pjdr2_0672 protein of unknown function DUF975; PFAM: Protein of unknown function DUF975; SPTR: uncharacterized protein; hypothetical protein complement(4130469..4131077) Cyclobacterium marinum DSM 745 11034667 YP_004775455.1 CDS Cycma_3504 NC_015914.1 4131571 4131966 R PFAM: Protein of unknown function (DUF559); COGs: COG2852 conserved hypothetical protein; InterPro IPR007569; KEGG: mtt:Ftrac_0387 hypothetical protein; PFAM: Protein of unknown function DUF559; SPTR: DNA methylase; hypothetical protein complement(4131571..4131966) Cyclobacterium marinum DSM 745 11034668 YP_004775456.1 CDS Cycma_3505 NC_015914.1 4132076 4133248 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgi:PG1658 ISPg4, transposase; PFAM: Transposase, IS4-like; SPTR: ISPg4, transposase; transposase IS4 family protein 4132076..4133248 Cyclobacterium marinum DSM 745 11034669 YP_004775457.1 CDS Cycma_3506 NC_015914.1 4133895 4135034 D KEGG: bfs:BF3552 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4133895..4135034 Cyclobacterium marinum DSM 745 11034670 YP_004775458.1 CDS Cycma_3507 NC_015914.1 4135269 4136297 R PFAM: alpha/beta hydrolase fold; InterPro IPR000073; KEGG: dfe:Dfer_3650 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: hydrolase, alpha/beta fold family; alpha/beta hydrolase complement(4135269..4136297) Cyclobacterium marinum DSM 745 11034671 YP_004775459.1 CDS Cycma_3508 NC_015914.1 4136302 4137102 R PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR004455; KEGG: cpi:Cpin_0657 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(4136302..4137102) Cyclobacterium marinum DSM 745 11034672 YP_004775460.1 CDS Cycma_3509 NC_015914.1 4137173 4138843 R PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: cly:Celly_2536 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Peptidase M1 membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase complement(4137173..4138843) Cyclobacterium marinum DSM 745 11034673 YP_004775461.1 CDS Cycma_3510 NC_015914.1 4138858 4139619 R PFAM: Creatinine amidohydrolase; COGs: COG1402 Uncharacterized protein amidase; InterPro IPR003785; KEGG: fbc:FB2170_16431 hypothetical protein; PFAM: Creatininase; SPTR: amidase; creatininase complement(4138858..4139619) Cyclobacterium marinum DSM 745 11034674 YP_004775462.1 CDS Cycma_3511 NC_015914.1 4139776 4140627 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: shg:Sph21_0626 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4139776..4140627 Cyclobacterium marinum DSM 745 11034675 YP_004775463.1 CDS Cycma_3512 NC_015914.1 4140670 4142040 R PFAM: Amidohydrolase; InterPro IPR006680; KEGG: rbi:RB2501_00486 amidohydrolase enzyme; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase enzyme; amidohydrolase complement(4140670..4142040) Cyclobacterium marinum DSM 745 11034676 YP_004775464.1 CDS Cycma_3513 NC_015914.1 4142084 4143061 R PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014189:IPR013154:IPR013149; KEGG: mtt:Ftrac_2305 nad(p)h quinone oxidoreductase, pig3 family; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: Quinone oxidoreductase , PIG3; NAD(P)H quinone oxidoreductase complement(4142084..4143061) Cyclobacterium marinum DSM 745 11034677 YP_004775465.1 CDS Cycma_3514 NC_015914.1 4143065 4143865 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cts:Ctha_0244 UspA domain-containing protein; PFAM: UspA; SPTR: universal stress protein; UspA domain-containing protein complement(4143065..4143865) Cyclobacterium marinum DSM 745 11034678 YP_004775466.1 CDS Cycma_3515 NC_015914.1 4143968 4144483 D PFAM: Thioesterase superfamily; Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; KEGG: sli:Slin_1854 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4143968..4144483 Cyclobacterium marinum DSM 745 11034679 YP_004775467.1 CDS Cycma_3516 NC_015914.1 4144614 4145552 R hypothetical protein complement(4144614..4145552) Cyclobacterium marinum DSM 745 11034680 YP_004775468.1 CDS Cycma_3517 NC_015914.1 4146164 4148176 R PFAM: Prolyl oligopeptidase; KEGG: pbs:Plabr_2183 acetyl xylan esterase; SPTR: uncharacterized protein; acetyl xylan esterase complement(4146164..4148176) Cyclobacterium marinum DSM 745 11034681 YP_004775469.1 CDS Cycma_3518 NC_015914.1 4148449 4149279 D PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: dfe:Dfer_4437 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 4148449..4149279 Cyclobacterium marinum DSM 745 11034682 YP_004775470.1 CDS Cycma_3519 NC_015914.1 4149309 4150634 R PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR005580; KEGG: fba:FIC_00865 ATP-independent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-independent RNA helicase; DEAD/DEAH box helicase complement(4149309..4150634) Cyclobacterium marinum DSM 745 11034683 YP_004775471.1 CDS Cycma_3520 NC_015914.1 4150777 4151358 R KEGG: sli:Slin_3472 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein complement(4150777..4151358) Cyclobacterium marinum DSM 745 11034684 YP_004775472.1 CDS Cycma_3521 NC_015914.1 4151726 4153387 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; COGs: COG1069 Ribulose kinase; InterPro IPR018484:IPR018485; KEGG: gfo:GFO_0697 ribulokinase; PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal; SPTR: Ribulokinase; carbohydrate kinase complement(4151726..4153387) Cyclobacterium marinum DSM 745 11034685 YP_004775473.1 CDS Cycma_3522 NC_015914.1 4153595 4154104 R hypothetical protein complement(4153595..4154104) Cyclobacterium marinum DSM 745 11034686 YP_004775474.1 CDS Cycma_3523 NC_015914.1 4154648 4155151 R KEGG: hypothetical protein; hypothetical protein complement(4154648..4155151) Cyclobacterium marinum DSM 745 11034687 YP_004775475.1 CDS Cycma_3524 NC_015914.1 4155583 4155936 R hypothetical protein complement(4155583..4155936) Cyclobacterium marinum DSM 745 11034688 YP_004775476.1 CDS Cycma_3525 NC_015914.1 4156323 4156496 R hypothetical protein complement(4156323..4156496) Cyclobacterium marinum DSM 745 11034689 YP_004775477.1 CDS Cycma_3526 NC_015914.1 4156778 4159186 D PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_1978 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: uncharacterized protein; hypothetical protein 4156778..4159186 Cyclobacterium marinum DSM 745 11034690 YP_004775478.1 CDS Cycma_3527 NC_015914.1 4159190 4160647 D PFAM: Protein of unknown function (DUF1501); InterPro IPR006311:IPR010869; KEGG: sli:Slin_0960 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: Twin-arginine translocation pathway signal; hypothetical protein 4159190..4160647 Cyclobacterium marinum DSM 745 11034691 YP_004775479.1 CDS Cycma_3528 NC_015914.1 4160775 4161731 D PFAM: Aldo/keto reductase; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: abo:ABO_2414 aldehyde reductase; PFAM: Aldo/keto reductase; SPTR: Aldehyde reductase; manually curated; aldo/keto reductase 4160775..4161731 Cyclobacterium marinum DSM 745 11034692 YP_004775480.1 CDS Cycma_3529 NC_015914.1 4161764 4162720 D PFAM: Aldo/keto reductase; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: srm:SRM_01456 aldehyde reductase; PFAM: Aldo/keto reductase; SPTR: Alcohol dehydrogenase; aldo/keto reductase 4161764..4162720 Cyclobacterium marinum DSM 745 11034693 YP_004775481.1 CDS Cycma_3530 NC_015914.1 4163180 4163284 D hypothetical protein 4163180..4163284 Cyclobacterium marinum DSM 745 11034694 YP_004775482.1 CDS Cycma_3531 NC_015914.1 4163289 4163726 D PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: mtt:Ftrac_2273 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; response regulator receiver protein 4163289..4163726 Cyclobacterium marinum DSM 745 11034695 YP_004775483.1 CDS Cycma_3532 NC_015914.1 4163860 4165335 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03975 arylsulfatase A; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 4163860..4165335 Cyclobacterium marinum DSM 745 11034696 YP_004775484.1 CDS Cycma_3533 NC_015914.1 4165473 4166891 D PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_2236 glu/leu/phe/val dehydrogenase dimerization region; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase dimerization region; Glu/Leu/Phe/Val dehydrogenase 4165473..4166891 Cyclobacterium marinum DSM 745 11034697 YP_004775485.1 CDS Cycma_3534 NC_015914.1 4167068 4167307 D hypothetical protein 4167068..4167307 Cyclobacterium marinum DSM 745 11034698 YP_004775486.1 CDS Cycma_3535 NC_015914.1 4167219 4168091 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: shg:Sph21_3958 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Gallidermin/nisin family lantibiotic; hypothetical protein complement(4167219..4168091) Cyclobacterium marinum DSM 745 11034699 YP_004775487.1 CDS Cycma_3536 NC_015914.1 4168120 4169205 R SPTR: uncharacterized protein; hypothetical protein complement(4168120..4169205) Cyclobacterium marinum DSM 745 11034700 YP_004775488.1 CDS Cycma_3537 NC_015914.1 4169394 4170806 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: shg:Sph21_0211 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: dehydrogenase; oxidoreductase domain-containing protein 4169394..4170806 Cyclobacterium marinum DSM 745 11034701 YP_004775489.1 CDS Cycma_3538 NC_015914.1 4170984 4172579 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pdi:BDI_3965 arylsulfatase precursor; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 4170984..4172579 Cyclobacterium marinum DSM 745 11034702 YP_004775490.1 CDS Cycma_3539 NC_015914.1 4172585 4173751 R KEGG: dfe:Dfer_4537 FG-GAP repeat-containing protein; SPTR: FG-GAP repeat-containing protein; hypothetical protein complement(4172585..4173751) Cyclobacterium marinum DSM 745 11034703 YP_004775491.1 CDS Cycma_3540 NC_015914.1 4173753 4176839 R PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428:IPR013427:IPR003088; KEGG: ipa:Isop_1996 membrane-bound dehydrogenase domain-containing protein; PFAM: Cytochrome c, class I; SPTR: L-sorbosone dehydrogenase; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein complement(4173753..4176839) Cyclobacterium marinum DSM 745 11034704 YP_004775492.1 CDS Cycma_3541 NC_015914.1 4177030 4177218 R KEGG: fjo:Fjoh_4522 hypothetical protein; hypothetical protein complement(4177030..4177218) Cyclobacterium marinum DSM 745 11034705 YP_004775493.1 CDS Cycma_3542 NC_015914.1 4177543 4178253 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein complement(4177543..4178253) Cyclobacterium marinum DSM 745 11034706 YP_004775494.1 CDS Cycma_3543 NC_015914.1 4178372 4179943 R KEGG: mtt:Ftrac_3577 cytoplasmic protein; SPTR: Hypothetical cytosolic protein; hypothetical protein complement(4178372..4179943) Cyclobacterium marinum DSM 745 11034707 YP_004775495.1 CDS Cycma_3544 NC_015914.1 4180082 4181419 R KEGG: fjo:Fjoh_2321 OmpA/MotB domain-containing protein; SPTR: uncharacterized protein; hypothetical protein complement(4180082..4181419) Cyclobacterium marinum DSM 745 11034708 YP_004775496.1 CDS Cycma_3545 NC_015914.1 4181563 4182351 D hypothetical protein 4181563..4182351 Cyclobacterium marinum DSM 745 11034709 YP_004775497.1 CDS Cycma_3546 NC_015914.1 4182345 4183358 D PFAM: Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: mtt:Ftrac_2159 peptidase S41; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: Peptidase S41; peptidase S41 4182345..4183358 Cyclobacterium marinum DSM 745 11034710 YP_004775498.1 CDS Cycma_3547 NC_015914.1 4183369 4186344 R PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013428:IPR013427:IPR003088; KEGG: pbs:Plabr_3734 membrane-bound dehydrogenase domain protein; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein complement(4183369..4186344) Cyclobacterium marinum DSM 745 11034711 YP_004775499.1 CDS Cycma_3548 NC_015914.1 4186424 4188010 R InterPro IPR006311; KEGG: psl:Psta_2338 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4186424..4188010) Cyclobacterium marinum DSM 745 11034712 YP_004775500.1 CDS Cycma_3549 NC_015914.1 4188499 4189365 D PFAM: N-acetyltransferase; COGs: COG2162 Arylamine N-acetyltransferase; InterPro IPR001447; KEGG: shg:Sph21_4060 arylamine N-acetyltransferase; PFAM: N-acetyltransferase; SPTR: Arylamine N-acetyltransferase; N-acetyltransferase 4188499..4189365 Cyclobacterium marinum DSM 745 11034713 YP_004775501.1 CDS Cycma_3550 NC_015914.1 4189478 4189723 R hypothetical protein complement(4189478..4189723) Cyclobacterium marinum DSM 745 11034714 YP_004775502.1 CDS Cycma_3551 NC_015914.1 4190757 4192088 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: pdi:BDI_2047 NADH-dependent dyhydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; oxidoreductase domain-containing protein 4190757..4192088 Cyclobacterium marinum DSM 745 11034715 YP_004775503.1 CDS Cycma_3552 NC_015914.1 4192715 4193851 R KEGG: bth:BT_3593 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4192715..4193851) Cyclobacterium marinum DSM 745 11034716 YP_004775504.1 CDS Cycma_3553 NC_015914.1 4194312 4197701 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 4194312..4197701 Cyclobacterium marinum DSM 745 11034717 YP_004775505.1 CDS Cycma_3554 NC_015914.1 4197731 4199314 D KEGG: lby:Lbys_2804 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4197731..4199314 Cyclobacterium marinum DSM 745 11034718 YP_004775506.1 CDS Cycma_3555 NC_015914.1 4199465 4200880 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4057 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: Twin-arginine translocation pathway signal; sulfatase complement(4199465..4200880) Cyclobacterium marinum DSM 745 11034719 YP_004775507.1 CDS Cycma_3556 NC_015914.1 4201050 4202606 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03325 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A; sulfatase 4201050..4202606 Cyclobacterium marinum DSM 745 11034720 YP_004775508.1 CDS Cycma_3557 NC_015914.1 4202656 4204008 D PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: dfe:Dfer_2125 protein of unknown function DUF1593; PFAM: Protein of unknown function DUF1593; SPTR: uncharacterized protein; hypothetical protein 4202656..4204008 Cyclobacterium marinum DSM 745 11034721 YP_004775509.1 CDS Cycma_3558 NC_015914.1 4204131 4206116 D PFAM: Heparinase II/III-like protein; KEGG: bhl:Bache_0095 heparinase II/III family protein; SPTR: uncharacterized protein; heparinase II/III family protein 4204131..4206116 Cyclobacterium marinum DSM 745 11034722 YP_004775510.1 CDS Cycma_3559 NC_015914.1 4206325 4208205 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3463 sulfatase; PFAM: Sulfatase; SPTR: Probable sulfatase AtsG; sulfatase 4206325..4208205 Cyclobacterium marinum DSM 745 11034723 YP_004775511.1 CDS Cycma_3560 NC_015914.1 4208278 4210053 D PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: mtt:Ftrac_1602 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter; Na+/solute symporter 4208278..4210053 Cyclobacterium marinum DSM 745 11034724 YP_004775512.1 CDS Cycma_3561 NC_015914.1 4210820 4213171 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_1561 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 4210820..4213171 Cyclobacterium marinum DSM 745 11034725 YP_004775513.1 CDS Cycma_3562 NC_015914.1 4213177 4214103 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4213177..4214103 Cyclobacterium marinum DSM 745 11034726 YP_004775514.1 CDS Cycma_3563 NC_015914.1 4214353 4214967 R KEGG: zpr:ZPR_0790 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4214353..4214967) Cyclobacterium marinum DSM 745 11034727 YP_004775515.1 CDS Cycma_3564 NC_015914.1 4215173 4216852 D PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: mtt:Ftrac_0905 amp-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase/ligase 4215173..4216852 Cyclobacterium marinum DSM 745 11034728 YP_004775516.1 CDS Cycma_3565 NC_015914.1 4216849 4217424 R PFAM: Maltose acetyltransferase; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: zpr:ZPR_0801 maltose O-acetyltransferase; SPTR: Maltose O-acetyltransferase; maltose O-acetyltransferase complement(4216849..4217424) Cyclobacterium marinum DSM 745 11034729 YP_004775517.1 CDS Cycma_3566 NC_015914.1 4217428 4217976 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4217428..4217976) Cyclobacterium marinum DSM 745 11034730 YP_004775518.1 CDS Cycma_3567 NC_015914.1 4218144 4219511 D PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR006055:IPR000305:IPR013520; KEGG: mtt:Ftrac_0002 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III subunit epsilon 4218144..4219511 Cyclobacterium marinum DSM 745 11034731 YP_004775519.1 CDS Cycma_3568 NC_015914.1 4219551 4220570 D PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: gfo:GFO_1691 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase; aldo/keto reductase 4219551..4220570 Cyclobacterium marinum DSM 745 11034732 YP_004775520.1 CDS Cycma_3569 NC_015914.1 4220741 4221538 D KEGG: fbc:FB2170_14168 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4220741..4221538 Cyclobacterium marinum DSM 745 11034733 YP_004775521.1 CDS Cycma_3570 NC_015914.1 4221711 4222334 R SPTR: uncharacterized protein; hypothetical protein complement(4221711..4222334) Cyclobacterium marinum DSM 745 11034734 YP_004775522.1 CDS Cycma_3571 NC_015914.1 4222382 4223080 R PFAM: Sir2 family; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent deacetylase; InterPro IPR003000; KEGG: chu:CHU_2345 NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: NAD-dependent deacetylase; NAD-dependent deacetylase complement(4222382..4223080) Cyclobacterium marinum DSM 745 11034735 YP_004775523.1 CDS Cycma_3572 NC_015914.1 4223094 4225064 R PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: swp:swp_3739 OmpA protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: outer membrane protein; OmpA/MotB domain-containing protein complement(4223094..4225064) Cyclobacterium marinum DSM 745 11034736 YP_004775524.1 CDS Cycma_3573 NC_015914.1 4225071 4226228 R SPTR: uncharacterized protein; hypothetical protein complement(4225071..4226228) Cyclobacterium marinum DSM 745 11034737 YP_004775525.1 CDS Cycma_3574 NC_015914.1 4226702 4230109 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR004155:IPR010496; KEGG: phe:Phep_2672 hypothetical protein; PFAM: Protein of unknown function DUF1080; PBS lyase HEAT-like repeat; SPTR: uncharacterized protein; hypothetical protein complement(4226702..4230109) Cyclobacterium marinum DSM 745 11034738 YP_004775526.1 CDS Cycma_3575 NC_015914.1 4230138 4231403 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: dfe:Dfer_2975 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(4230138..4231403) Cyclobacterium marinum DSM 745 11034739 YP_004775527.1 CDS Cycma_3576 NC_015914.1 4231573 4231806 D hypothetical protein 4231573..4231806 Cyclobacterium marinum DSM 745 11034740 YP_004775528.1 CDS Cycma_3577 NC_015914.1 4231799 4232059 D PFAM: Rho termination factor, N-terminal domain; KEGG: fjo:Fjoh_3369 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4231799..4232059 Cyclobacterium marinum DSM 745 11034741 YP_004775529.1 CDS Cycma_3578 NC_015914.1 4232144 4232404 R hypothetical protein complement(4232144..4232404) Cyclobacterium marinum DSM 745 11034742 YP_004775530.1 CDS Cycma_3579 NC_015914.1 4232779 4235130 R PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR006154:IPR003601:IPR003602:IPR 006171:IPR013497; KEGG: mtt:Ftrac_3551 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type; DNA topoisomerase I complement(4232779..4235130) Cyclobacterium marinum DSM 745 11034743 YP_004775531.1 CDS Cycma_3580 NC_015914.1 4235183 4235278 R hypothetical protein complement(4235183..4235278) Cyclobacterium marinum DSM 745 11034744 YP_004775532.1 CDS Cycma_3581 NC_015914.1 4235300 4235776 D PFAM: Phosphoglycerate mutase; TIGRFAM: phosphohistidine phosphatase SixA; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: psn:Pedsa_2108 phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SPTR: phosphohistidine phosphatase SixA; phosphohistidine phosphatase SixA 4235300..4235776 Cyclobacterium marinum DSM 745 11034745 YP_004775533.1 CDS Cycma_3582 NC_015914.1 4235821 4236894 D PFAM: Arginase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase; InterPro IPR006035; KEGG: mtt:Ftrac_3549 arginase/agmatinase/formiminoglutamase; PFAM: Ureohydrolase; SPTR: Arginase/agmatinase/formiminoglutamase; arginase 4235821..4236894 Cyclobacterium marinum DSM 745 11034746 YP_004775534.1 CDS Cycma_3583 NC_015914.1 4237065 4238459 D PFAM: MatE; TIGRFAM: efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mtt:Ftrac_3283 mate efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; manually curated; MATE efflux family protein 4237065..4238459 Cyclobacterium marinum DSM 745 11034747 YP_004775535.1 CDS Cycma_3584 NC_015914.1 4238986 4240941 R KEGG: maq:Maqu_3469 hypothetical protein; SPTR: Probable secreted protein; hypothetical protein complement(4238986..4240941) Cyclobacterium marinum DSM 745 11034748 YP_004775536.1 CDS Cycma_3585 NC_015914.1 4241521 4241805 R PFAM: Trm112p-like protein; InterPro IPR005651; KEGG: ran:Riean_0485 hypothetical protein; PFAM: Protein of unknown function DUF343; SPTR: uncharacterized protein; hypothetical protein complement(4241521..4241805) Cyclobacterium marinum DSM 745 11034749 YP_004775537.1 CDS Cycma_3586 NC_015914.1 4241802 4242449 R PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: ran:Riean_0486 thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine monophosphate synthase; thiamine monophosphate synthase complement(4241802..4242449) Cyclobacterium marinum DSM 745 11034750 YP_004775538.1 CDS Cycma_3587 NC_015914.1 4242446 4243498 R PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728:IPR010918; KEGG: ran:Riean_0487 air synthase related protein domain protein; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; SPTR: Hydrogenase maturation factor; AIR synthase-like protein domain-containing protein complement(4242446..4243498) Cyclobacterium marinum DSM 745 11034751 YP_004775539.1 CDS Cycma_3588 NC_015914.1 4243499 4244221 R PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ran:Riean_0488 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase; type 11 methyltransferase complement(4243499..4244221) Cyclobacterium marinum DSM 745 11034752 YP_004775540.1 CDS Cycma_3590 NC_015914.1 4248015 4249364 R hypothetical protein complement(4248015..4249364) Cyclobacterium marinum DSM 745 11034754 YP_004775541.1 CDS Cycma_3591 NC_015914.1 4249558 4250514 R KEGG: chu:CHU_2246 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4249558..4250514) Cyclobacterium marinum DSM 745 11034755 YP_004775542.1 CDS Cycma_3592 NC_015914.1 4250507 4251916 R TIGRFAM: Dyp-type peroxidase; COGs: COG2837 iron-dependent peroxidase; KEGG: chu:CHU_2248 peroxidase; SPTR: Peroxidase; peroxidase complement(4250507..4251916) Cyclobacterium marinum DSM 745 11034756 YP_004775543.1 CDS Cycma_3593 NC_015914.1 4251921 4253246 R KEGG: chu:CHU_2247 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4251921..4253246) Cyclobacterium marinum DSM 745 11034757 YP_004775544.1 CDS Cycma_3594 NC_015914.1 4253834 4255708 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_2520 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 4253834..4255708 Cyclobacterium marinum DSM 745 11034758 YP_004775545.1 CDS Cycma_3596 NC_015914.1 4256781 4257953 D PFAM: transposase; InterPro IPR007069; KEGG: tjr:TherJR_1461 transposase; PFAM: Transposase, IS801/IS1294; SPTR: transposase; transposase 4256781..4257953 Cyclobacterium marinum DSM 745 11034760 YP_004775546.1 CDS Cycma_3597 NC_015914.1 4258262 4258837 D hypothetical protein 4258262..4258837 Cyclobacterium marinum DSM 745 11034761 YP_004775547.1 CDS Cycma_3598 NC_015914.1 4259490 4260752 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR: uncharacterized protein; RNA-directed DNA polymerase 4259490..4260752 Cyclobacterium marinum DSM 745 11034762 YP_004775548.1 CDS Cycma_3600 NC_015914.1 4261796 4262968 D PFAM: transposase; InterPro IPR007069; KEGG: tjr:TherJR_1461 transposase; PFAM: Transposase, IS801/IS1294; SPTR: transposase; transposase 4261796..4262968 Cyclobacterium marinum DSM 745 11034764 YP_004775549.1 CDS Cycma_3601 NC_015914.1 4263281 4263988 D SPTR: uncharacterized protein; hypothetical protein 4263281..4263988 Cyclobacterium marinum DSM 745 11034765 YP_004775550.1 CDS Cycma_3602 NC_015914.1 4264126 4264740 D hypothetical protein 4264126..4264740 Cyclobacterium marinum DSM 745 11034766 YP_004775551.1 CDS Cycma_3603 NC_015914.1 4265401 4266663 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR: uncharacterized protein; manually curated; RNA-directed DNA polymerase 4265401..4266663 Cyclobacterium marinum DSM 745 11034767 YP_004775552.1 CDS Cycma_3604 NC_015914.1 4266779 4267771 D KEGG: esi:Exig_2764 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4266779..4267771 Cyclobacterium marinum DSM 745 11034768 YP_004775553.1 CDS Cycma_3605 NC_015914.1 4267836 4268621 D KEGG: fba:FIC_00622 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4267836..4268621 Cyclobacterium marinum DSM 745 11034769 YP_004775554.1 CDS Cycma_3606 NC_015914.1 4268706 4269224 D hypothetical protein 4268706..4269224 Cyclobacterium marinum DSM 745 11034770 YP_004775555.1 CDS Cycma_3607 NC_015914.1 4269849 4270094 D hypothetical protein 4269849..4270094 Cyclobacterium marinum DSM 745 11034771 YP_004775556.1 CDS Cycma_3608 NC_015914.1 4270091 4270711 D KEGG: cly:Celly_1483 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4270091..4270711 Cyclobacterium marinum DSM 745 11034772 YP_004775557.1 CDS Cycma_3609 NC_015914.1 4271208 4271540 D hypothetical protein 4271208..4271540 Cyclobacterium marinum DSM 745 11034773 YP_004775558.1 CDS Cycma_3610 NC_015914.1 4271850 4272881 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sde:Sde_0435 5,10-methylenetetrahydrofolate reductase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 4271850..4272881 Cyclobacterium marinum DSM 745 11034774 YP_004775559.1 CDS Cycma_3611 NC_015914.1 4273377 4274516 D PFAM: Domain of unknown function (DUF1083); PKD domain; InterPro IPR000601; KEGG: sus:Acid_3986 PKD domain-containing protein; PFAM: PKD; SMART: PKD; SPTR: PKD domain containing protein; PKD domain-containing protein 4273377..4274516 Cyclobacterium marinum DSM 745 11034775 YP_004775560.1 CDS Cycma_3612 NC_015914.1 4274558 4277293 D PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain; InterPro IPR013737:IPR008902; KEGG: alpha-L-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; SPTR: Alpha-rhamnosidase; alpha-L-rhamnosidase 4274558..4277293 Cyclobacterium marinum DSM 745 11034776 YP_004775561.1 CDS Cycma_3613 NC_015914.1 4277441 4278049 D PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: phe:Phep_2669 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 4277441..4278049 Cyclobacterium marinum DSM 745 11034777 YP_004775562.1 CDS Cycma_3614 NC_015914.1 4278176 4279180 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_1919 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR 4278176..4279180 Cyclobacterium marinum DSM 745 11034778 YP_004775563.1 CDS Cycma_3615 NC_015914.1 4279318 4282761 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1274 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 4279318..4282761 Cyclobacterium marinum DSM 745 11034779 YP_004775564.1 CDS Cycma_3616 NC_015914.1 4282774 4284156 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_0773 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4282774..4284156 Cyclobacterium marinum DSM 745 11034780 YP_004775565.1 CDS Cycma_3617 NC_015914.1 4284354 4286138 D KEGG: rca:Rcas_2444 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4284354..4286138 Cyclobacterium marinum DSM 745 11034781 YP_004775566.1 CDS Cycma_3618 NC_015914.1 4286365 4288269 D KEGG: htu:Htur_4781 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4286365..4288269 Cyclobacterium marinum DSM 745 11034782 YP_004775567.1 CDS Cycma_3619 NC_015914.1 4290619 4291191 R hypothetical protein complement(4290619..4291191) Cyclobacterium marinum DSM 745 11034783 YP_004775568.1 CDS Cycma_3620 NC_015914.1 4291257 4291781 R PFAM: alpha/beta hydrolase fold; hypothetical protein complement(4291257..4291781) Cyclobacterium marinum DSM 745 11034784 YP_004775569.1 CDS Cycma_3621 NC_015914.1 4291778 4292863 R KEGG: pdi:BDI_3448 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4291778..4292863) Cyclobacterium marinum DSM 745 11034785 YP_004775570.1 CDS Cycma_3622 NC_015914.1 4293313 4294401 R KEGG: rmr:Rmar_2068 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4293313..4294401) Cyclobacterium marinum DSM 745 11034786 YP_004775571.1 CDS Cycma_3623 NC_015914.1 4294465 4294686 R hypothetical protein complement(4294465..4294686) Cyclobacterium marinum DSM 745 11034787 YP_004775572.1 CDS Cycma_3624 NC_015914.1 4294886 4295785 R PFAM: Sulfotransferase domain; KEGG: aar:Acear_2160 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4294886..4295785) Cyclobacterium marinum DSM 745 11034788 YP_004775573.1 CDS Cycma_3625 NC_015914.1 4295763 4296122 R PFAM: LytTr DNA-binding domain; InterPro IPR007492; PFAM: LytTr DNA-binding region; LytTr DNA-binding protein complement(4295763..4296122) Cyclobacterium marinum DSM 745 11034789 YP_004775574.1 CDS Cycma_3627 NC_015914.1 4297584 4298363 R TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: gme:Gmet_2335 methyltransferase FkbM; SPTR: Methyltransferase FkbM; TIGRFAM: Methyltransferase FkbM; FkbM family methyltransferase complement(4297584..4298363) Cyclobacterium marinum DSM 745 11034791 YP_004775575.1 CDS Cycma_3628 NC_015914.1 4298348 4299130 R KEGG: pdi:BDI_0151 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4298348..4299130) Cyclobacterium marinum DSM 745 11034792 YP_004775576.1 CDS Cycma_3629 NC_015914.1 4299123 4300187 R PFAM: Lanthionine synthetase C-like protein; InterPro IPR007822; KEGG: pdi:BDI_0152 hypothetical protein; PFAM: Lanthionine synthetase C-like; SPTR: Predicted protein; lanthionine synthetase C family protein complement(4299123..4300187) Cyclobacterium marinum DSM 745 11034793 YP_004775577.1 CDS Cycma_3631 NC_015914.1 4300985 4302052 R KEGG: rmr:Rmar_2068 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4300985..4302052) Cyclobacterium marinum DSM 745 11034795 YP_004775578.1 CDS Cycma_3632 NC_015914.1 4302224 4302445 R hypothetical protein complement(4302224..4302445) Cyclobacterium marinum DSM 745 11034796 YP_004775579.1 CDS Cycma_3633 NC_015914.1 4302657 4303811 R KEGG: sli:Slin_4441 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4302657..4303811) Cyclobacterium marinum DSM 745 11034797 YP_004775580.1 CDS Cycma_3634 NC_015914.1 4303820 4304065 R hypothetical protein complement(4303820..4304065) Cyclobacterium marinum DSM 745 11034798 YP_004775581.1 CDS Cycma_3635 NC_015914.1 4304377 4304736 D hypothetical protein 4304377..4304736 Cyclobacterium marinum DSM 745 11034799 YP_004775582.1 CDS Cycma_3636 NC_015914.1 4304806 4304925 D hypothetical protein 4304806..4304925 Cyclobacterium marinum DSM 745 11034800 YP_004775583.1 CDS Cycma_3637 NC_015914.1 4304993 4306009 R PFAM: Kelch motif; InterPro IPR006652; KEGG: lil:LA_1759 hypothetical protein; PFAM: Kelch repeat type 1; SPTR: uncharacterized protein; Kelch repeat type 1-containing protein complement(4304993..4306009) Cyclobacterium marinum DSM 745 11034801 YP_004775584.1 CDS Cycma_3638 NC_015914.1 4306019 4306828 R PFAM: Trehalose utilisation; KEGG: sli:Slin_1261 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4306019..4306828) Cyclobacterium marinum DSM 745 11034802 YP_004775585.1 CDS Cycma_3639 NC_015914.1 4307266 4307652 D hypothetical protein 4307266..4307652 Cyclobacterium marinum DSM 745 11034803 YP_004775586.1 CDS Cycma_3640 NC_015914.1 4308283 4308441 D hypothetical protein 4308283..4308441 Cyclobacterium marinum DSM 745 11034804 YP_004775587.1 CDS Cycma_3641 NC_015914.1 4309314 4310726 R hypothetical protein complement(4309314..4310726) Cyclobacterium marinum DSM 745 11034805 YP_004775588.1 CDS Cycma_3642 NC_015914.1 4311181 4313790 D PFAM: PhoD-like phosphatase; KEGG: psl:Psta_3961 twin-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 4311181..4313790 Cyclobacterium marinum DSM 745 11034806 YP_004775589.1 CDS Cycma_3643 NC_015914.1 4313858 4315393 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_14578 sulfatase; PFAM: Sulfatase; SPTR: sulfatase; sulfatase 4313858..4315393 Cyclobacterium marinum DSM 745 11034807 YP_004775590.1 CDS Cycma_3644 NC_015914.1 4315601 4317946 D PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_1978 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: Xanthan lyase; hypothetical protein 4315601..4317946 Cyclobacterium marinum DSM 745 11034808 YP_004775591.1 CDS Cycma_3645 NC_015914.1 4318375 4318521 R hypothetical protein complement(4318375..4318521) Cyclobacterium marinum DSM 745 11034809 YP_004775592.1 CDS Cycma_3646 NC_015914.1 4318727 4321903 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_2316 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: outer membrane protein probably involved in nutrient binding; TonB-dependent receptor 4318727..4321903 Cyclobacterium marinum DSM 745 11034810 YP_004775593.1 CDS Cycma_3647 NC_015914.1 4321908 4323470 D PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_2322 hypothetical protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 4321908..4323470 Cyclobacterium marinum DSM 745 11034811 YP_004775594.1 CDS Cycma_3649 NC_015914.1 4324954 4326315 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1509 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 4324954..4326315 Cyclobacterium marinum DSM 745 11034813 YP_004775595.1 CDS Cycma_3650 NC_015914.1 4326341 4327705 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2744 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase; sulfatase 4326341..4327705 Cyclobacterium marinum DSM 745 11034814 YP_004775596.1 CDS Cycma_3651 NC_015914.1 4327743 4329188 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0659 cerebroside-sulfatase; PFAM: Sulfatase; SPTR: Cerebroside-sulfatase; sulfatase 4327743..4329188 Cyclobacterium marinum DSM 745 11034815 YP_004775597.1 CDS Cycma_3653 NC_015914.1 4331198 4331446 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4331198..4331446) Cyclobacterium marinum DSM 745 11034817 YP_004775598.1 CDS Cycma_3654 NC_015914.1 4332157 4335255 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_3123 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 4332157..4335255 Cyclobacterium marinum DSM 745 11034818 YP_004775599.1 CDS Cycma_3655 NC_015914.1 4335264 4336697 D PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_3124 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4335264..4336697 Cyclobacterium marinum DSM 745 11034819 YP_004775600.1 CDS Cycma_3656 NC_015914.1 4336697 4337098 D hypothetical protein 4336697..4337098 Cyclobacterium marinum DSM 745 11034820 YP_004775601.1 CDS Cycma_3657 NC_015914.1 4337169 4340666 R PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013519:IPR011519:IPR013517; KEGG: cao:Celal_0458 aspic/unbv domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein complement(4337169..4340666) Cyclobacterium marinum DSM 745 11034821 YP_004775602.1 CDS Cycma_3658 NC_015914.1 4340850 4342181 D PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: rmr:Rmar_0511 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 4340850..4342181 Cyclobacterium marinum DSM 745 11034822 YP_004775603.1 CDS Cycma_3659 NC_015914.1 4342607 4343449 D InterPro IPR012307; KEGG: sli:Slin_2651 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4342607..4343449 Cyclobacterium marinum DSM 745 11034823 YP_004775604.1 CDS Cycma_3660 NC_015914.1 4343690 4346575 D PFAM: Cytochrome c; InterPro IPR003088; KEGG: dfe:Dfer_5289 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I; cytochrome c class I 4343690..4346575 Cyclobacterium marinum DSM 745 11034824 YP_004775605.1 CDS Cycma_3661 NC_015914.1 4346817 4347722 D PFAM: Isochorismatase; KEGG: rba:RB1599 signal peptide; SPTR: uncharacterized protein; hypothetical protein 4346817..4347722 Cyclobacterium marinum DSM 745 11034825 YP_004775606.1 CDS Cycma_3662 NC_015914.1 4347792 4349189 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3894 sulfatase; PFAM: Sulfatase; SPTR: uncharacterized protein; sulfatase complement(4347792..4349189) Cyclobacterium marinum DSM 745 11034826 YP_004775607.1 CDS Cycma_3663 NC_015914.1 4349361 4350767 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sus:Acid_1241 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase complement(4349361..4350767) Cyclobacterium marinum DSM 745 11034827 YP_004775608.1 CDS Cycma_3664 NC_015914.1 4351107 4352636 R PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_0809 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein complement(4351107..4352636) Cyclobacterium marinum DSM 745 11034828 YP_004775609.1 CDS Cycma_3665 NC_015914.1 4352655 4356026 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2292 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug complement(4352655..4356026) Cyclobacterium marinum DSM 745 11034829 YP_004775610.1 CDS Cycma_3666 NC_015914.1 4356335 4357840 R PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_1676 hypothetical protein; PFAM: RagB/SusD; SPTR: Outer membrane protein; RagB/SusD domain-containing protein complement(4356335..4357840) Cyclobacterium marinum DSM 745 11034830 YP_004775611.1 CDS Cycma_3667 NC_015914.1 4357852 4361232 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_1677 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(4357852..4361232) Cyclobacterium marinum DSM 745 11034831 YP_004775612.1 CDS Cycma_3668 NC_015914.1 4361380 4362438 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: dfe:Dfer_4707 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR complement(4361380..4362438) Cyclobacterium marinum DSM 745 11034832 YP_004775613.1 CDS Cycma_3669 NC_015914.1 4362567 4363166 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: phe:Phep_0060 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(4362567..4363166) Cyclobacterium marinum DSM 745 11034833 YP_004775614.1 CDS Cycma_3670 NC_015914.1 4363908 4364705 R PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: mtt:Ftrac_1980 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Beta-propeller domain of methanol dehydrogenase type protein; hypothetical protein complement(4363908..4364705) Cyclobacterium marinum DSM 745 11034834 YP_004775615.1 CDS Cycma_3671 NC_015914.1 4364712 4365146 R PFAM: Domain of unknown function (DUF477); COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: mtt:Ftrac_2203 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: uncharacterized protein; hypothetical protein complement(4364712..4365146) Cyclobacterium marinum DSM 745 11034835 YP_004775616.1 CDS Cycma_3672 NC_015914.1 4365159 4365749 R PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: dfe:Dfer_4336 LemA family protein; PFAM: LemA; SPTR: LemA protein; LemA family protein complement(4365159..4365749) Cyclobacterium marinum DSM 745 11034836 YP_004775617.1 CDS Cycma_3673 NC_015914.1 4366546 4367868 D KEGG: pdi:BDI_3423 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4366546..4367868 Cyclobacterium marinum DSM 745 11034837 YP_004775618.1 CDS Cycma_3674 NC_015914.1 4368636 4369856 R KEGG: rec:RHECIAT_CH0003299 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4368636..4369856) Cyclobacterium marinum DSM 745 11034838 YP_004775619.1 CDS Cycma_3675 NC_015914.1 4370008 4370988 R KEGG: shn:Shewana3_3703 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4370008..4370988) Cyclobacterium marinum DSM 745 11034839 YP_004775620.1 CDS Cycma_3676 NC_015914.1 4371281 4372303 R PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: nde:NIDE3513 NADPH-dependent oxidoreductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase; aldo/keto reductase complement(4371281..4372303) Cyclobacterium marinum DSM 745 11034840 YP_004775621.1 CDS Cycma_3677 NC_015914.1 4372315 4374162 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: ppn:Palpr_2815 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; TonB-dependent receptor plug complement(4372315..4374162) Cyclobacterium marinum DSM 745 11034841 YP_004775622.1 CDS Cycma_3678 NC_015914.1 4374152 4374589 R PFAM: Phosphoribosyl transferase domain; COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: tra:Trad_0659 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; phosphoribosyltransferase complement(4374152..4374589) Cyclobacterium marinum DSM 745 11034842 YP_004775623.1 CDS Cycma_3679 NC_015914.1 4374635 4375171 R KEGG: tra:Trad_0662 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4374635..4375171) Cyclobacterium marinum DSM 745 11034843 YP_004775624.1 CDS Cycma_3680 NC_015914.1 4375945 4376556 D COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: fba:FIC_00360 acetyltransferase; SPTR: acetyltransferase; acetyltransferase 4375945..4376556 Cyclobacterium marinum DSM 745 11034844 YP_004775625.1 CDS Cycma_3681 NC_015914.1 4377038 4377946 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: cly:Celly_0938 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alkyl hydroperoxide reductase, F52a subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4377038..4377946 Cyclobacterium marinum DSM 745 11034845 YP_004775626.1 CDS Cycma_3682 NC_015914.1 4378054 4378869 D PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: svo:SVI_0853 ROK family protein; PFAM: ROK; SPTR: ROK family protein; ROK family protein 4378054..4378869 Cyclobacterium marinum DSM 745 11034846 YP_004775627.1 CDS Cycma_3683 NC_015914.1 4378973 4381393 R PFAM: 7TM diverse intracellular signalling; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011622:IPR011623:IPR003661:IPR003594:IPR 001789; KEGG: pmy:Pmen_3766 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Signal transduction histidine kinase-like protein; ATP-binding protein complement(4378973..4381393) Cyclobacterium marinum DSM 745 11034847 YP_004775628.1 CDS Cycma_3684 NC_015914.1 4381769 4384183 R PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011622:IPR011623:IPR003661:IPR003594:IPR 001789; KEGG: integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Signal transduction histidine kinase-like protein; ATP-binding protein complement(4381769..4384183) Cyclobacterium marinum DSM 745 11034848 YP_004775629.1 CDS Cycma_3685 NC_015914.1 4384282 4384482 D hypothetical protein 4384282..4384482 Cyclobacterium marinum DSM 745 11034849 YP_004775630.1 CDS Cycma_3686 NC_015914.1 4384541 4384726 D hypothetical protein 4384541..4384726 Cyclobacterium marinum DSM 745 11034850 YP_004775631.1 CDS Cycma_3687 NC_015914.1 4385178 4386047 R PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase accessory protein FdhD; COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; HAMAP: Protein fdhD; InterPro IPR003786; KEGG: protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD; SPTR: Protein FdhD homolog; TIGRFAM: Formate dehydrogenase, subunit FdhD; protein fdhD complement(4385178..4386047) Cyclobacterium marinum DSM 745 11034851 YP_004775632.1 CDS Cycma_3688 NC_015914.1 4386031 4388316 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: cpi:Cpin_4072 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(4386031..4388316) Cyclobacterium marinum DSM 745 11034852 YP_004775633.1 CDS Cycma_3689 NC_015914.1 4388377 4388490 R hypothetical protein complement(4388377..4388490) Cyclobacterium marinum DSM 745 11034853 YP_004775634.1 CDS Cycma_3691 NC_015914.1 4390093 4391589 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 4390093..4391589 Cyclobacterium marinum DSM 745 11034855 YP_004775635.1 CDS Cycma_3692 NC_015914.1 4391591 4393735 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterPro IPR019551:IPR019556:IPR002372:IPR018391; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme, N-terminal; PQQ-dependent enzyme, C-terminal; Pyrrolo-quinoline quinone repeat; SPTR: PQQ enzyme repeat; PQQ-dependent enzyme 4391591..4393735 Cyclobacterium marinum DSM 745 11034856 YP_004775636.1 CDS Cycma_3693 NC_015914.1 4393818 4395380 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: ipa:Isop_1913 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; metallophosphoesterase complement(4393818..4395380) Cyclobacterium marinum DSM 745 11034857 YP_004775637.1 CDS Cycma_3694 NC_015914.1 4395386 4395541 D hypothetical protein 4395386..4395541 Cyclobacterium marinum DSM 745 11034858 YP_004775638.1 CDS Cycma_3695 NC_015914.1 4395610 4398078 R PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; COGs: COG1643 HrpA-like helicase; InterProIPR001650:IPR007502:IPR013689:IPR010225:IPR 014001; KEGG: chu:CHU_3110 ATP-dependent helicase; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent helicase HrpB; TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; ATP-dependent helicase HrpB complement(4395610..4398078) Cyclobacterium marinum DSM 745 11034859 YP_004775639.1 CDS Cycma_3696 NC_015914.1 4398232 4398741 R PFAM: Protein of unknown function (DUF2911); KEGG: sli:Slin_2860 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4398232..4398741) Cyclobacterium marinum DSM 745 11034860 YP_004775640.1 CDS Cycma_3697 NC_015914.1 4398945 4400090 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: dfe:Dfer_5057 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold domain protein; oxidoreductase domain-containing protein complement(4398945..4400090) Cyclobacterium marinum DSM 745 11034861 YP_004775641.1 CDS Cycma_3698 NC_015914.1 4400432 4400959 D KEGG: aco:Amico_1736 transcriptional regulator, PaaX family; SPTR: transcription regulator; PaaX family transcriptional regulator 4400432..4400959 Cyclobacterium marinum DSM 745 11034862 YP_004775642.1 CDS Cycma_3699 NC_015914.1 4400934 4401881 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: chu:CHU_2999 b-glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; family 2 glycosyl transferase 4400934..4401881 Cyclobacterium marinum DSM 745 11034863 YP_004775643.1 CDS Cycma_3700 NC_015914.1 4401883 4402614 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: atm:ANT_20150 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: acetyltransferase; N-acetyltransferase GCN5 4401883..4402614 Cyclobacterium marinum DSM 745 11034864 YP_004775644.1 CDS Cycma_3701 NC_015914.1 4402642 4403604 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4402642..4403604 Cyclobacterium marinum DSM 745 11034865 YP_004775645.1 CDS Cycma_3702 NC_015914.1 4403609 4404529 D KEGG: mar:MAE_36240 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4403609..4404529 Cyclobacterium marinum DSM 745 11034866 YP_004775646.1 CDS Cycma_3703 NC_015914.1 4404533 4405771 D KEGG: ppy:PPE_01146 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4404533..4405771 Cyclobacterium marinum DSM 745 11034867 YP_004775647.1 CDS Cycma_3704 NC_015914.1 4405794 4407587 D PFAM: ABC transporter; ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_2029 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; ABC transporter 4405794..4407587 Cyclobacterium marinum DSM 745 11034868 YP_004775648.1 CDS Cycma_3705 NC_015914.1 4407645 4408319 D KEGG: cyp:PCC8801_2393 hypothetical protein; SPTR: TPR repeat-containing protein; hypothetical protein 4407645..4408319 Cyclobacterium marinum DSM 745 11034869 YP_004775649.1 CDS Cycma_3706 NC_015914.1 4408327 4408947 D TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: bth:BT_2943 hexapeptide transferase; SPTR: Pilin glycosylation protein PglB; hexapeptide transferase 4408327..4408947 Cyclobacterium marinum DSM 745 11034870 YP_004775650.1 CDS Cycma_3707 NC_015914.1 4408944 4409828 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ava:Ava_2389 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 4408944..4409828 Cyclobacterium marinum DSM 745 11034871 YP_004775651.1 CDS Cycma_3708 NC_015914.1 4409846 4410766 D PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: mtt:Ftrac_0590 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 4409846..4410766 Cyclobacterium marinum DSM 745 11034872 YP_004775652.1 CDS Cycma_3709 NC_015914.1 4410769 4411569 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fjo:Fjoh_0314 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Candidate beta-glycosyltransferase; Glycosyltransferase 2; family 2 glycosyl transferase 4410769..4411569 Cyclobacterium marinum DSM 745 11034873 YP_004775653.1 CDS Cycma_3710 NC_015914.1 4411569 4412684 D PFAM: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase); KEGG: she:Shewmr4_1323 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4411569..4412684 Cyclobacterium marinum DSM 745 11034874 YP_004775654.1 CDS Cycma_3711 NC_015914.1 4412681 4413814 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abo:ABO_0919 glycosyl transferase, PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 4412681..4413814 Cyclobacterium marinum DSM 745 11034875 YP_004775655.1 CDS Cycma_3712 NC_015914.1 4413801 4414919 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abo:ABO_0920 glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 4413801..4414919 Cyclobacterium marinum DSM 745 11034876 YP_004775656.1 CDS Cycma_3713 NC_015914.1 4414931 4416166 D KEGG: gfo:GFO_2000 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4414931..4416166 Cyclobacterium marinum DSM 745 11034877 YP_004775657.1 CDS Cycma_3714 NC_015914.1 4416188 4417264 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: par:Psyc_0667 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Similar to Glycosyl transferases group 1; group 1 glycosyl transferase 4416188..4417264 Cyclobacterium marinum DSM 745 11034878 YP_004775658.1 CDS Cycma_3715 NC_015914.1 4417306 4418499 D KEGG: avn:Avin_30010 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4417306..4418499 Cyclobacterium marinum DSM 745 11034879 YP_004775659.1 CDS Cycma_3716 NC_015914.1 4418504 4419670 D KEGG: gfo:GFO_2000 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4418504..4419670 Cyclobacterium marinum DSM 745 11034880 YP_004775660.1 CDS Cycma_3717 NC_015914.1 4419667 4420635 D PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: gfo:GFO_1999 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; polysaccharide deacetylase 4419667..4420635 Cyclobacterium marinum DSM 745 11034881 YP_004775661.1 CDS Cycma_3718 NC_015914.1 4420861 4421160 D KEGG: phe:Phep_0899 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4420861..4421160 Cyclobacterium marinum DSM 745 11034882 YP_004775662.1 CDS Cycma_3719 NC_015914.1 4421246 4421608 D PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase; COGs: COG1803 Methylglyoxal synthase; HAMAP: Methylglyoxal synthase; InterPro IPR011607:IPR004363; KEGG: mtt:Ftrac_0851 methylglyoxal synthase; PFAM: MGS-like; SPTR: Methylglyoxal synthase; TIGRFAM: Methylglyoxal synthase; methylglyoxal synthase 4421246..4421608 Cyclobacterium marinum DSM 745 11034883 YP_004775663.1 CDS Cycma_3720 NC_015914.1 4421634 4422626 D PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023:IPR012828; KEGG: mtt:Ftrac_3083 6-phosphofructokinase; PFAM: Phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase 4421634..4422626 Cyclobacterium marinum DSM 745 11034884 YP_004775664.1 CDS Cycma_3721 NC_015914.1 4422861 4424327 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341; KEGG: dfe:Dfer_1106 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; mandelate racemase 4422861..4424327 Cyclobacterium marinum DSM 745 11034885 YP_004775665.1 CDS Cycma_3722 NC_015914.1 4424442 4424810 D PFAM: Membrane protein of unknown function; InterPro IPR007165; KEGG: gem:GM21_2032 membrane protein of unknown function; PFAM: Membrane protein of unknown function; SPTR: Membrane protein; hypothetical protein 4424442..4424810 Cyclobacterium marinum DSM 745 11034886 YP_004775666.1 CDS Cycma_3723 NC_015914.1 4425109 4425669 D KEGG: mtt:Ftrac_0747 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4425109..4425669 Cyclobacterium marinum DSM 745 11034887 YP_004775667.1 CDS Cycma_3724 NC_015914.1 4426051 4426953 D PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mtt:Ftrac_0746 histone deacetylase; PFAM: Histone deacetylase superfamily; SPTR: Histone deacetylase; histone deacetylase superfamily protein 4426051..4426953 Cyclobacterium marinum DSM 745 11034888 YP_004775668.1 CDS Cycma_3725 NC_015914.1 4427123 4427746 D PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: mtt:Ftrac_0744 outer membrane chaperone skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: uncharacterized protein; outer membrane chaperone Skp 4427123..4427746 Cyclobacterium marinum DSM 745 11034889 YP_004775669.1 CDS Cycma_3726 NC_015914.1 4427901 4428872 D PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase; COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: gau:GAU_2131 deoxyhypusine synthase-like protein; PFAM: Deoxyhypusine synthase; SPTR: Deoxyhypusine synthase; deoxyhypusine synthase 4427901..4428872 Cyclobacterium marinum DSM 745 11034890 YP_004775670.1 CDS Cycma_3727 NC_015914.1 4428883 4430292 D PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: mtt:Ftrac_0146 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4428883..4430292 Cyclobacterium marinum DSM 745 11034891 YP_004775671.1 CDS Cycma_3728 NC_015914.1 4430410 4432920 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1582 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor; TonB-dependent receptor plug complement(4430410..4432920) Cyclobacterium marinum DSM 745 11034892 YP_004775672.1 CDS Cycma_3729 NC_015914.1 4433214 4434287 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: sli:Slin_0331 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signaling protein without kinase domain protein; signal transduction histidine kinase 4433214..4434287 Cyclobacterium marinum DSM 745 11034893 YP_004775673.1 CDS Cycma_3730 NC_015914.1 4434284 4435009 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: phe:Phep_3124 LytTr DNA-binding subunit; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver domain protein; LytTR family two component transcriptional regulator 4434284..4435009 Cyclobacterium marinum DSM 745 11034894 YP_004775674.1 CDS Cycma_3731 NC_015914.1 4435186 4436259 R PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; Peptide methionine sulfoxide reductase msrB; InterPro IPR002569:IPR002579; KEGG: vfi:VF_A0005 peptide-methionine (S)-S-oxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; SPTR: Peptide methionine sulfoxide reductase MsrA/msrB; TIGRFAM: Methionine sulphoxide reductase B; Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase complement(4435186..4436259) Cyclobacterium marinum DSM 745 11034895 YP_004775675.1 CDS Cycma_3732 NC_015914.1 4436700 4437143 D KEGG: tva:TVAG_216960 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein; hypothetical protein 4436700..4437143 Cyclobacterium marinum DSM 745 11034896 YP_004775676.1 CDS Cycma_3733 NC_015914.1 4437546 4439096 D PFAM: BNR/Asp-box repeat; KEGG: bhl:Bache_2784 sialidase; SPTR: BNR/Asp-box repeat protein; hypothetical protein 4437546..4439096 Cyclobacterium marinum DSM 745 11034897 YP_004775677.1 CDS Cycma_3734 NC_015914.1 4439324 4440397 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655:IPR003661:IPR003594:IPR000014; KEGG: mtt:Ftrac_2914 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; PAS; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 4439324..4440397 Cyclobacterium marinum DSM 745 11034898 YP_004775678.1 CDS Cycma_3735 NC_015914.1 4440567 4441904 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: mtt:Ftrac_3597 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4440567..4441904 Cyclobacterium marinum DSM 745 11034899 YP_004775679.1 CDS Cycma_3736 NC_015914.1 4441910 4443454 D COGs: COG0348 Polyferredoxin; InterPro IPR001450; KEGG: mtt:Ftrac_3598 hypothetical protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S binding domain protein; 4Fe-4S ferredoxin 4441910..4443454 Cyclobacterium marinum DSM 745 11034900 YP_004775680.1 CDS Cycma_3737 NC_015914.1 4443457 4444923 D PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3361 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 4443457..4444923 Cyclobacterium marinum DSM 745 11034901 YP_004775681.1 CDS Cycma_3738 NC_015914.1 4444982 4445662 D PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: mtt:Ftrac_3360 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; family 2 glycosyl transferase 4444982..4445662 Cyclobacterium marinum DSM 745 11034902 YP_004775682.1 CDS Cycma_3739 NC_015914.1 4445831 4446712 D KEGG: mtt:Ftrac_1593 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4445831..4446712 Cyclobacterium marinum DSM 745 11034903 YP_004775683.1 CDS Cycma_3740 NC_015914.1 4446725 4448047 D KEGG: mtt:Ftrac_3362 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4446725..4448047 Cyclobacterium marinum DSM 745 11034904 YP_004775684.1 CDS Cycma_3741 NC_015914.1 4448180 4448857 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: cly:Celly_0732 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(4448180..4448857) Cyclobacterium marinum DSM 745 11034905 YP_004775685.1 CDS Cycma_3742 NC_015914.1 4448875 4450692 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: shg:Sph21_3745 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Multi-sensor signal transduction histidine kinase; signal transduction histidine kinase complement(4448875..4450692) Cyclobacterium marinum DSM 745 11034906 YP_004775686.1 CDS Cycma_3743 NC_015914.1 4450908 4451291 R PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941:IPR012748; KEGG: cly:Celly_0741 nitrite reductase (NAD(P)H) small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Nitrite reductase (NAD(P)H), small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; nitrite reductase (NAD(P)H) small subunit complement(4450908..4451291) Cyclobacterium marinum DSM 745 11034907 YP_004775687.1 CDS Cycma_3744 NC_015914.1 4451341 4453836 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR013027:IPR007419:IPR005117:IPR006067:IPR 012744; KEGG: shg:Sph21_3748 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region; SPTR: Nitrite reductase (NAD(P)H), large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; nitrite reductase (NAD(P)H) large subunit complement(4451341..4453836) Cyclobacterium marinum DSM 745 11034908 YP_004775688.1 CDS Cycma_3745 NC_015914.1 4453993 4454757 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878:IPR006366; KEGG: fjo:Fjoh_1505 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; uroporphyrin-III C-methyltransferase 4453993..4454757 Cyclobacterium marinum DSM 745 11034909 YP_004775689.1 CDS Cycma_3746 NC_015914.1 4455103 4456533 R PFAM: Rubredoxin; InterPro IPR004039; KEGG: cao:Celal_1353 rubredoxin-type fe(cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; rubredoxin-type Fe(Cys)4 protein complement(4455103..4456533) Cyclobacterium marinum DSM 745 11034910 YP_004775690.1 CDS Cycma_3747 NC_015914.1 4456754 4460275 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006657:IPR013027:IPR 007419; KEGG: nitrate reductase., nitrite reductase (NAD(P)H); PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; SPTR: Nitrate reductase, Nitrite reductase (NAD(P)H); molybdopterin oxidoreductase complement(4456754..4460275) Cyclobacterium marinum DSM 745 11034911 YP_004775691.1 CDS Cycma_3748 NC_015914.1 4460420 4461778 R PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: lbf:LBF_2686 nitrate/nitrite transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: nitrite extrusion protein 1 NarK,MFS superfamily; major facilitator superfamily protein complement(4460420..4461778) Cyclobacterium marinum DSM 745 11034912 YP_004775692.1 CDS Cycma_3749 NC_015914.1 4462040 4462171 R hypothetical protein complement(4462040..4462171) Cyclobacterium marinum DSM 745 11034913 YP_004775693.1 CDS Cycma_3750 NC_015914.1 4462687 4463493 D KEGG: zpr:ZPR_3092 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4462687..4463493 Cyclobacterium marinum DSM 745 11034914 YP_004775694.1 CDS Cycma_3751 NC_015914.1 4463514 4464470 D PFAM: Patatin-like phospholipase; COGs: COG4667 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: zpr:ZPR_1206 patatin-like phospholipase; PFAM: Patatin; SPTR: Serine protease; patatin 4463514..4464470 Cyclobacterium marinum DSM 745 11034915 YP_004775695.1 CDS Cycma_3752 NC_015914.1 4464454 4465149 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: pbs:Plabr_4562 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; G-D-S-L family lipolytic protein 4464454..4465149 Cyclobacterium marinum DSM 745 11034916 YP_004775696.1 CDS Cycma_3753 NC_015914.1 4465340 4466332 D PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sta:STHERM_c04250 hypothetical protein; PFAM: Aldo/keto reductase; SPTR: uncharacterized protein; aldo/keto reductase 4465340..4466332 Cyclobacterium marinum DSM 745 11034917 YP_004775697.1 CDS Cycma_3754 NC_015914.1 4466965 4468440 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2092 Iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase; sulfatase 4466965..4468440 Cyclobacterium marinum DSM 745 11034918 YP_004775698.1 CDS Cycma_3755 NC_015914.1 4468452 4469891 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cps:CPS_2368 N-acetylglucosamine-6-sulfatase; PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); sulfatase 4468452..4469891 Cyclobacterium marinum DSM 745 11034919 YP_004775699.1 CDS Cycma_3756 NC_015914.1 4469893 4471284 D KEGG: rba:RB7871 signal peptide; SPTR: uncharacterized protein; hypothetical protein 4469893..4471284 Cyclobacterium marinum DSM 745 11034920 YP_004775700.1 CDS Cycma_3757 NC_015914.1 4471374 4471976 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: dfe:Dfer_1793 transcriptional regulator, LuxR family; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 4471374..4471976 Cyclobacterium marinum DSM 745 11034921 YP_004775701.1 CDS Cycma_3758 NC_015914.1 4472266 4473372 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cpi:Cpin_1889 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR 4472266..4473372 Cyclobacterium marinum DSM 745 11034922 YP_004775702.1 CDS Cycma_3759 NC_015914.1 4473512 4476907 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_0502 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; TonB-dependent receptor plug 4473512..4476907 Cyclobacterium marinum DSM 745 11034923 YP_004775703.1 CDS Cycma_3760 NC_015914.1 4476928 4478337 D KEGG: pdi:BDI_0499 hypothetical protein; SPTR: Lipoprotein; hypothetical protein 4476928..4478337 Cyclobacterium marinum DSM 745 11034924 YP_004775704.1 CDS Cycma_3761 NC_015914.1 4478306 4479889 D KEGG: rba:RB940 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4478306..4479889 Cyclobacterium marinum DSM 745 11034925 YP_004775705.1 CDS Cycma_3762 NC_015914.1 4480105 4483032 R PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterProIPR001258:IPR003088:IPR013428:IPR013427:IPR 004155; KEGG: dfe:Dfer_3707 membrane-bound dehydrogenase domain protein; PFAM: Cytochrome c, class I; NHL repeat; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein complement(4480105..4483032) Cyclobacterium marinum DSM 745 11034926 YP_004775706.1 CDS Cycma_3763 NC_015914.1 4483391 4484797 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: sus:Acid_3331 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase- NAD-employing oxidoreductase of the GFO family protein; oxidoreductase domain-containing protein 4483391..4484797 Cyclobacterium marinum DSM 745 11034927 YP_004775707.1 CDS Cycma_3764 NC_015914.1 4484961 4486022 D PFAM: Uncharacterized protein conserved in bacteria (DUF2248); COGs: COG4307 conserved hypothetical protein; InterPro IPR011201; KEGG: gbe:GbCGDNIH1_1418 cytoplasmic protein; PFAM: Uncharacterised conserved protein UCP012641; SPTR: uncharacterized protein; hypothetical protein 4484961..4486022 Cyclobacterium marinum DSM 745 11034928 YP_004775708.1 CDS Cycma_3765 NC_015914.1 4486153 4487592 D PFAM: Glycosyl hydrolases family 39; KEGG: gpb:HDN1F_14410 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4486153..4487592 Cyclobacterium marinum DSM 745 11034929 YP_004775709.1 CDS Cycma_3766 NC_015914.1 4487842 4489260 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: phe:Phep_0775 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(4487842..4489260) Cyclobacterium marinum DSM 745 11034930 YP_004775710.1 CDS Cycma_3767 NC_015914.1 4489601 4491610 R PFAM: HI0933-like protein; InterPro IPR004792; KEGG: psl:Psta_0465 xanthan lyase; PFAM: HI0933-like protein; SPTR: uncharacterized protein; hypothetical protein complement(4489601..4491610) Cyclobacterium marinum DSM 745 11034931 YP_004775711.1 CDS Cycma_3768 NC_015914.1 4491675 4492940 R KEGG: sde:Sde_2315 hypothetical protein; SPTR: Probable cycloinulo-oligosaccharide fructanotransferase; hypothetical protein complement(4491675..4492940) Cyclobacterium marinum DSM 745 11034932 YP_004775712.1 CDS Cycma_3769 NC_015914.1 4493367 4494956 D KEGG: rba:RB9442 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4493367..4494956 Cyclobacterium marinum DSM 745 11034933 YP_004775713.1 CDS Cycma_3770 NC_015914.1 4495062 4496600 D PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4495062..4496600 Cyclobacterium marinum DSM 745 11034934 YP_004775714.1 CDS Cycma_3771 NC_015914.1 4496650 4498122 D PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4496650..4498122 Cyclobacterium marinum DSM 745 11034935 YP_004775715.1 CDS Cycma_3772 NC_015914.1 4498147 4499646 D PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4498147..4499646 Cyclobacterium marinum DSM 745 11034936 YP_004775716.1 CDS Cycma_3773 NC_015914.1 4499697 4502723 D PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013428:IPR013427; KEGG: membrane-bound dehydrogenase domain-containing protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein 4499697..4502723 Cyclobacterium marinum DSM 745 11034937 YP_004775717.1 CDS Cycma_3774 NC_015914.1 4502761 4503609 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: dfe:Dfer_3436 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4502761..4503609 Cyclobacterium marinum DSM 745 11034938 YP_004775718.1 CDS Cycma_3775 NC_015914.1 4503635 4504549 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307:IPR006311; KEGG: cly:Celly_1669 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable glyoxylate-induced protein; xylose isomerase domain-containing protein 4503635..4504549 Cyclobacterium marinum DSM 745 11034939 YP_004775719.1 CDS Cycma_3776 NC_015914.1 4504563 4506053 D PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: rba:RB7871 signal peptide; SPTR: uncharacterized protein; hypothetical protein 4504563..4506053 Cyclobacterium marinum DSM 745 11034940 YP_004775720.1 CDS Cycma_3777 NC_015914.1 4506578 4507060 D hypothetical protein 4506578..4507060 Cyclobacterium marinum DSM 745 11034941 YP_004775721.1 CDS Cycma_3778 NC_015914.1 4507473 4508279 R hypothetical protein complement(4507473..4508279) Cyclobacterium marinum DSM 745 11034942 YP_004775722.1 CDS Cycma_3779 NC_015914.1 4508532 4509479 R PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sus:Acid_6536 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(4508532..4509479) Cyclobacterium marinum DSM 745 11034943 YP_004775723.1 CDS Cycma_3780 NC_015914.1 4510135 4512900 D KEGG: dfe:Dfer_5762 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4510135..4512900 Cyclobacterium marinum DSM 745 11034944 YP_004775724.1 CDS Cycma_3781 NC_015914.1 4512999 4514147 R KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4512999..4514147) Cyclobacterium marinum DSM 745 11034945 YP_004775725.1 CDS Cycma_3782 NC_015914.1 4514808 4516835 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR013655:IPR003661:IPR003594:IPR 000014:IPR001610; KEGG: chu:CHU_1899 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold-3; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 4514808..4516835 Cyclobacterium marinum DSM 745 11034946 YP_004775726.1 CDS Cycma_3783 NC_015914.1 4517061 4517774 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_0295 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein 4517061..4517774 Cyclobacterium marinum DSM 745 11034947 YP_004775727.1 CDS Cycma_3784 NC_015914.1 4518044 4518664 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 4518044..4518664 Cyclobacterium marinum DSM 745 11034948 YP_004775728.1 CDS Cycma_3785 NC_015914.1 4518804 4519913 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cly:Celly_2996 anti-FecI sigma factor FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR 4518804..4519913 Cyclobacterium marinum DSM 745 11034949 YP_004775729.1 CDS Cycma_3786 NC_015914.1 4520072 4523386 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_0357 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-linked outer membrane receptor protein; TonB-dependent receptor plug 4520072..4523386 Cyclobacterium marinum DSM 745 11034950 YP_004775730.1 CDS Cycma_3787 NC_015914.1 4523421 4525079 D PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_2495 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: outer membrane protein; RagB/SusD domain-containing protein 4523421..4525079 Cyclobacterium marinum DSM 745 11034951 YP_004775731.1 CDS Cycma_3788 NC_015914.1 4525173 4526504 D KEGG: aex:Astex_2206 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4525173..4526504 Cyclobacterium marinum DSM 745 11034952 YP_004775732.1 CDS Cycma_3789 NC_015914.1 4526501 4529662 D PFAM: FAD binding domain; InterPro IPR004792; KEGG: gym:GYMC10_3240 FAD dependent oxidoreductase; PFAM: HI0933-like protein; SPTR: dihydrolipoamide dehydrogenase CdlD; hypothetical protein 4526501..4529662 Cyclobacterium marinum DSM 745 11034953 YP_004775733.1 CDS Cycma_3790 NC_015914.1 4529687 4530766 D KEGG: shg:Sph21_4330 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4529687..4530766 Cyclobacterium marinum DSM 745 11034954 YP_004775734.1 CDS Cycma_3791 NC_015914.1 4531097 4531363 D hypothetical protein 4531097..4531363 Cyclobacterium marinum DSM 745 11034955 YP_004775735.1 CDS Cycma_3793 NC_015914.1 4533778 4535130 R PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329 transposase; SPTR: transposase; transposase complement(4533778..4535130) Cyclobacterium marinum DSM 745 11034957 YP_004775736.1 CDS Cycma_3794 NC_015914.1 4536914 4538371 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1779 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4536914..4538371 Cyclobacterium marinum DSM 745 11034958 YP_004775737.1 CDS Cycma_3795 NC_015914.1 4538869 4540548 D PFAM: D-aminoacylase, C-terminal region; Amidohydrolase; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680:IPR012855; KEGG: N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 1; SPTR: N-acyl-D-amino-acid deacylase; D-aminoacylase domain-containing protein 4538869..4540548 Cyclobacterium marinum DSM 745 11034959 YP_004775738.1 CDS Cycma_3796 NC_015914.1 4540565 4541359 D PFAM: Domain of unknown function (DUF1961); SPTR: uncharacterized protein; hypothetical protein 4540565..4541359 Cyclobacterium marinum DSM 745 11034960 YP_004775739.1 CDS Cycma_3797 NC_015914.1 4541479 4542945 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3210 Iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase; sulfatase 4541479..4542945 Cyclobacterium marinum DSM 745 11034961 YP_004775740.1 CDS Cycma_3798 NC_015914.1 4543520 4544098 D PFAM: YceI-like domain; InterPro IPR007372; KEGG: zpr:ZPR_0535 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Secreted protein; hypothetical protein 4543520..4544098 Cyclobacterium marinum DSM 745 11034962 YP_004775741.1 CDS Cycma_3799 NC_015914.1 4544118 4545404 D KEGG: rbi:RB2501_13524 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4544118..4545404 Cyclobacterium marinum DSM 745 11034963 YP_004775742.1 CDS Cycma_3800 NC_015914.1 4545424 4545951 D KEGG: fjo:Fjoh_1778 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4545424..4545951 Cyclobacterium marinum DSM 745 11034964 YP_004775743.1 CDS Cycma_3801 NC_015914.1 4546134 4547183 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4546134..4547183 Cyclobacterium marinum DSM 745 11034965 YP_004775744.1 CDS Cycma_3802 NC_015914.1 4547422 4549776 D InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 4547422..4549776 Cyclobacterium marinum DSM 745 11034966 YP_004775745.1 CDS Cycma_3803 NC_015914.1 4549883 4551142 R KEGG: plm:Plim_3272 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4549883..4551142) Cyclobacterium marinum DSM 745 11034967 YP_004775746.1 CDS Cycma_3804 NC_015914.1 4551219 4554083 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_0556 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: Peptidase M16 domain protein; peptidase M16 domain-containing protein 4551219..4554083 Cyclobacterium marinum DSM 745 11034968 YP_004775747.1 CDS Cycma_3805 NC_015914.1 4554140 4555297 D PFAM: BNR/Asp-box repeat; COGs: COG4409 Neuraminidase (sialidase); KEGG: plm:Plim_3447 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; glycosyl hydrolase family protein 4554140..4555297 Cyclobacterium marinum DSM 745 11034969 YP_004775748.1 CDS Cycma_3806 NC_015914.1 4555450 4556688 R PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019405; KEGG: dfe:Dfer_2435 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394; SPTR: 6-phosphogluconolactonase; hypothetical protein complement(4555450..4556688) Cyclobacterium marinum DSM 745 11034970 YP_004775749.1 CDS Cycma_3807 NC_015914.1 4557002 4558843 R PFAM: Alkaline phosphatase; COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: cly:Celly_2445 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; alkaline phosphatase complement(4557002..4558843) Cyclobacterium marinum DSM 745 11034971 YP_004775750.1 CDS Cycma_3808 NC_015914.1 4559091 4559369 D KEGG: chu:CHU_3552 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4559091..4559369 Cyclobacterium marinum DSM 745 11034972 YP_004775751.1 CDS Cycma_3809 NC_015914.1 4559435 4560157 D PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: mtt:Ftrac_0336 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4559435..4560157 Cyclobacterium marinum DSM 745 11034973 YP_004775752.1 CDS Cycma_3810 NC_015914.1 4560559 4561569 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: phe:Phep_1694 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 4560559..4561569 Cyclobacterium marinum DSM 745 11034974 YP_004775753.1 CDS Cycma_3811 NC_015914.1 4561582 4562925 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: psn:Pedsa_0739 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 4561582..4562925 Cyclobacterium marinum DSM 745 11034975 YP_004775754.1 CDS Cycma_3812 NC_015914.1 4563005 4564471 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: psn:Pedsa_0686 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: sodium-coupled permease; Na+/solute symporter 4563005..4564471 Cyclobacterium marinum DSM 745 11034976 YP_004775755.1 CDS Cycma_3813 NC_015914.1 4564607 4565446 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: zpr:ZPR_3488 xylose isomerase-like protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase-like protein; xylose isomerase domain-containing protein complement(4564607..4565446) Cyclobacterium marinum DSM 745 11034977 YP_004775756.1 CDS Cycma_3814 NC_015914.1 4565653 4566444 D PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: cpi:Cpin_2244 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 4565653..4566444 Cyclobacterium marinum DSM 745 11034978 YP_004775757.1 CDS Cycma_3815 NC_015914.1 4566441 4567859 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_00645 aryl-sulphate sulphohydrolase; PFAM: Sulfatase; SPTR: Arylsulfatase A; sulfatase complement(4566441..4567859) Cyclobacterium marinum DSM 745 11034979 YP_004775758.1 CDS Cycma_3816 NC_015914.1 4568171 4569298 D KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4568171..4569298 Cyclobacterium marinum DSM 745 11034980 YP_004775759.1 CDS Cycma_3817 NC_015914.1 4569754 4570767 R PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: osp:Odosp_3506 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; LacI family transcriptional regulator complement(4569754..4570767) Cyclobacterium marinum DSM 745 11034981 YP_004775760.1 CDS Cycma_3818 NC_015914.1 4571040 4574090 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_4333 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent Receptor Plug domain-containing protein; TonB-dependent receptor plug 4571040..4574090 Cyclobacterium marinum DSM 745 11034982 YP_004775761.1 CDS Cycma_3819 NC_015914.1 4574103 4575791 D PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_4332 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 4574103..4575791 Cyclobacterium marinum DSM 745 11034983 YP_004775762.1 CDS Cycma_3820 NC_015914.1 4575905 4577299 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cps:CPS_2368 N-acetylglucosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylglucosamine-6-sulfatase; sulfatase 4575905..4577299 Cyclobacterium marinum DSM 745 11034984 YP_004775763.1 CDS Cycma_3821 NC_015914.1 4577327 4579816 D KEGG: dfe:Dfer_1848 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4577327..4579816 Cyclobacterium marinum DSM 745 11034985 YP_004775764.1 CDS Cycma_3822 NC_015914.1 4579855 4580937 D KEGG: dfe:Dfer_2604 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4579855..4580937 Cyclobacterium marinum DSM 745 11034986 YP_004775765.1 CDS Cycma_3823 NC_015914.1 4580949 4582775 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR002218; KEGG: dfe:Dfer_2605 pyridine nucleotide-disulphide oxidoreductase; PFAM: Glucose-inhibited division protein A-related; SPTR: pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A 4580949..4582775 Cyclobacterium marinum DSM 745 11034987 YP_004775766.1 CDS Cycma_3824 NC_015914.1 4582790 4584232 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB2377 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase; sulfatase 4582790..4584232 Cyclobacterium marinum DSM 745 11034988 YP_004775767.1 CDS Cycma_3825 NC_015914.1 4584370 4586040 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: sodium solute transporter superfamily protein; PFAM: Sodium/solute symporter; SPTR: uncharacterized protein; Na+/solute symporter 4584370..4586040 Cyclobacterium marinum DSM 745 11034989 YP_004775768.1 CDS Cycma_3826 NC_015914.1 4586065 4588350 D PFAM: FAD binding domain; InterPro IPR003953; KEGG: shg:Sph21_1996 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: uncharacterized protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 4586065..4588350 Cyclobacterium marinum DSM 745 11034990 YP_004775769.1 CDS Cycma_3827 NC_015914.1 4588347 4590668 D PFAM: F5/8 type C domain; InterPro IPR000421; KEGG: shg:Sph21_1993 hypothetical protein; PFAM: Coagulation factor 5/8 type, C-terminal; SPTR: uncharacterized protein; coagulation factor 5/8 type domain-containing protein 4588347..4590668 Cyclobacterium marinum DSM 745 11034991 YP_004775770.1 CDS Cycma_3828 NC_015914.1 4590913 4592136 D PFAM: Alginate lyase; KEGG: sli:Slin_0557 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4590913..4592136 Cyclobacterium marinum DSM 745 11034992 YP_004775771.1 CDS Cycma_3829 NC_015914.1 4592787 4593503 D SPTR: uncharacterized protein; hypothetical protein 4592787..4593503 Cyclobacterium marinum DSM 745 11034993 YP_004775772.1 CDS Cycma_3830 NC_015914.1 4594090 4595295 D PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003018:IPR003661:IPR003594; KEGG: dfe:Dfer_1089 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; SPTR: GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 4594090..4595295 Cyclobacterium marinum DSM 745 11034994 YP_004775773.1 CDS Cycma_3831 NC_015914.1 4595455 4596069 R PFAM: Protein of unknown function (DUF2911); KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4595455..4596069) Cyclobacterium marinum DSM 745 11034995 YP_004775774.1 CDS Cycma_3832 NC_015914.1 4596729 4597967 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013656:IPR003661:IPR003594:IPR000014; KEGG: chu:CHU_1899 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 4596729..4597967 Cyclobacterium marinum DSM 745 11034996 YP_004775775.1 CDS Cycma_3833 NC_015914.1 4598035 4598799 D PFAM: Metallopeptidase M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR002467; KEGG: cly:Celly_0358 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; SPTR: Methionine aminopeptidase, type I; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase 4598035..4598799 Cyclobacterium marinum DSM 745 11034997 YP_004775776.1 CDS Cycma_3834 NC_015914.1 4598903 4599883 D PFAM: Glycosyl hydrolases family 43; SPTR: uncharacterized protein; hypothetical protein 4598903..4599883 Cyclobacterium marinum DSM 745 11034998 YP_004775777.1 CDS Cycma_3835 NC_015914.1 4599937 4600704 D PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: sli:Slin_1486 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 4599937..4600704 Cyclobacterium marinum DSM 745 11034999 YP_004775778.1 CDS Cycma_3836 NC_015914.1 4601299 4601583 D PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: Rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein; rhodanese-like protein 4601299..4601583 Cyclobacterium marinum DSM 745 11035000 YP_004775779.1 CDS Cycma_3837 NC_015914.1 4601588 4601902 D PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: Rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein; rhodanese-like protein 4601588..4601902 Cyclobacterium marinum DSM 745 11035001 YP_004775780.1 CDS Cycma_3838 NC_015914.1 4601928 4602404 D PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: Ferritin Dps family protein; PFAM: Ferritin/Dps protein; SPTR: DNA-binding protein; DPS family protein; ferritin 4601928..4602404 Cyclobacterium marinum DSM 745 11035002 YP_004775781.1 CDS Cycma_3839 NC_015914.1 4602782 4603534 D PFAM: Aminoglycoside 3-N-acetyltransferase; COGs: COG2746 Aminoglycoside N3'-acetyltransferase; InterPro IPR003679; KEGG: eel:EUBELI_20580 aminoglycoside N3-acetyltransferase; PFAM: Aminoglycoside 3-N-acetyltransferase; SPTR: uncharacterized protein; aminoglycoside 3-N-acetyltransferase 4602782..4603534 Cyclobacterium marinum DSM 745 11035003 YP_004775782.1 CDS Cycma_3840 NC_015914.1 4603535 4606819 R PFAM: WD40-like Beta Propeller Repeat; Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR011659:IPR002469:IPR006680; KEGG: fbc:FB2170_14083 hypothetical protein; PFAM: Amidohydrolase 1; Peptidase S9B, dipeptidylpeptidase IV N-terminal; WD40-like Beta Propeller; SPTR: uncharacterized protein; amidohydrolase complement(4603535..4606819) Cyclobacterium marinum DSM 745 11035004 YP_004775783.1 CDS Cycma_3841 NC_015914.1 4606919 4608328 D COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: hoh:Hoch_1862 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4606919..4608328 Cyclobacterium marinum DSM 745 11035727 YP_004775784.1 CDS Cycma_3842 NC_015914.1 4608617 4609975 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: sli:Slin_1843 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Dehydrogenase; oxidoreductase domain-containing protein complement(4608617..4609975) Cyclobacterium marinum DSM 745 11035728 YP_004775785.1 CDS Cycma_3843 NC_015914.1 4610023 4611189 R PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase; TIGRFAM: Mannonate dehydratase; mannonate dehydratase complement(4610023..4611189) Cyclobacterium marinum DSM 745 11035729 YP_004775786.1 CDS Cycma_3844 NC_015914.1 4611213 4612028 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: pdi:BDI_0377 D-mannonate oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Fructuronate reductase; short-chain dehydrogenase/reductase SDR complement(4611213..4612028) Cyclobacterium marinum DSM 745 11035730 YP_004775787.1 CDS Cycma_3845 NC_015914.1 4612055 4613701 R PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus; SAF domain; COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392; KEGG: cpi:Cpin_6828 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; SPTR: Altronate dehydratase; D-galactarate dehydratase/Altronate hydrolase domain-containing protein complement(4612055..4613701) Cyclobacterium marinum DSM 745 11035731 YP_004775788.1 CDS Cycma_3846 NC_015914.1 4614084 4615079 D PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: rmr:Rmar_2280 TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 4614084..4615079 Cyclobacterium marinum DSM 745 11035732 YP_004775789.1 CDS Cycma_3847 NC_015914.1 4615083 4615571 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: rbi:RB2501_03975 TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: TRAP dicarboxylate transporter, DctQ subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 4615083..4615571 Cyclobacterium marinum DSM 745 11035733 YP_004775790.1 CDS Cycma_3848 NC_015914.1 4615575 4616873 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: zpr:ZPR_2954 DctM-like transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 4615575..4616873 Cyclobacterium marinum DSM 745 11035734 YP_004775791.1 CDS Cycma_3849 NC_015914.1 4616972 4617130 R hypothetical protein complement(4616972..4617130) Cyclobacterium marinum DSM 745 11035735 YP_004775792.1 CDS Cycma_3850 NC_015914.1 4617201 4617401 R PFAM: Helix-turn-helix; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: sse:Ssed_4364 transcriptional regulator protein-like protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator protein-like protein; XRE family transcriptional regulator complement(4617201..4617401) Cyclobacterium marinum DSM 745 11035736 YP_004775793.1 CDS Cycma_3851 NC_015914.1 4617398 4617805 R KEGG: gfo:GFO_0831 membrane protein; SPTR: Membrane protein; hypothetical protein complement(4617398..4617805) Cyclobacterium marinum DSM 745 11035737 YP_004775794.1 CDS Cycma_3852 NC_015914.1 4618071 4621082 D PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: fbc:FB2170_04485 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: uncharacterized protein; hypothetical protein 4618071..4621082 Cyclobacterium marinum DSM 745 11035738 YP_004775795.1 CDS Cycma_3853 NC_015914.1 4621087 4622526 D PFAM: Protein of unknown function (DUF1501); InterPro IPR010869; KEGG: fbc:FB2170_04490 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; hypothetical protein 4621087..4622526 Cyclobacterium marinum DSM 745 11035739 YP_004775796.1 CDS Cycma_3854 NC_015914.1 4622618 4623895 D PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: aga:AgaP_AGAP000113 AGAP000113-PA; PFAM: Peptidase M14, carboxypeptidase A; SPTR: uncharacterized protein; peptidase M14 carboxypeptidase A 4622618..4623895 Cyclobacterium marinum DSM 745 11035740 YP_004775797.1 CDS Cycma_3855 NC_015914.1 4624654 4627560 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1871 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-linked outer membrane receptor protein; TonB-dependent receptor plug 4624654..4627560 Cyclobacterium marinum DSM 745 11035741 YP_004775798.1 CDS Cycma_3856 NC_015914.1 4627571 4629172 D PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_1872 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4627571..4629172 Cyclobacterium marinum DSM 745 11035742 YP_004775799.1 CDS Cycma_3857 NC_015914.1 4629352 4629759 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: cts:Ctha_1009 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 4629352..4629759 Cyclobacterium marinum DSM 745 11035743 YP_004775800.1 CDS Cycma_3858 NC_015914.1 4630533 4633640 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: bvu:BVU_0505 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 4630533..4633640 Cyclobacterium marinum DSM 745 11035744 YP_004775801.1 CDS Cycma_3859 NC_015914.1 4633658 4635214 D PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_6287 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4633658..4635214 Cyclobacterium marinum DSM 745 11035745 YP_004775802.1 CDS Cycma_3860 NC_015914.1 4635621 4636490 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: pjd:Pjdr2_6053 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 4635621..4636490 Cyclobacterium marinum DSM 745 11035746 YP_004775803.1 CDS Cycma_3862 NC_015914.1 4637414 4638910 D PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR000644; KEGG: bfs:BF3343 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; SPTR: inosine-5'-monophosphate dehydrogenase (GMP biosynthesis); IMP dehydrogenase 4637414..4638910 Cyclobacterium marinum DSM 745 11035748 YP_004775804.1 CDS Cycma_3863 NC_015914.1 4639040 4639168 R hypothetical protein complement(4639040..4639168) Cyclobacterium marinum DSM 745 11035749 YP_004775805.1 CDS Cycma_3864 NC_015914.1 4639200 4641542 D PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG5616 integral membrane protein; InterProIPR001054:IPR001440:IPR000005:IPR019734:IPR 018060; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC domain; Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide repeat; SPTR: Adenylate cyclase; Cya3; guanylate cyclase 4639200..4641542 Cyclobacterium marinum DSM 745 11035750 YP_004775806.1 CDS Cycma_3865 NC_015914.1 4641682 4642713 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: quinone oxidoreductase; alcohol dehydrogenase 4641682..4642713 Cyclobacterium marinum DSM 745 11035751 YP_004775807.1 CDS Cycma_3866 NC_015914.1 4642726 4643745 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_09476 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Beta-lactamase-related; SPTR: Serine-type D-Ala-D-Ala carboxypeptidase; beta-lactamase 4642726..4643745 Cyclobacterium marinum DSM 745 11035752 YP_004775808.1 CDS Cycma_3867 NC_015914.1 4643947 4645872 D PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: fjo:Fjoh_3805 hypothetical protein; PFAM: Glycoside hydrolase 97; SPTR: uncharacterized protein; glycoside hydrolase 4643947..4645872 Cyclobacterium marinum DSM 745 11035753 YP_004775809.1 CDS Cycma_3868 NC_015914.1 4646215 4646601 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: fjo:Fjoh_4919 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxylase; glyoxalase/bleomycin resistance protein/dioxygenase 4646215..4646601 Cyclobacterium marinum DSM 745 11035754 YP_004775810.1 CDS Cycma_3869 NC_015914.1 4646598 4647203 D COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001451; KEGG: zpr:ZPR_2553 transferase, LpxA family; SPTR: Transferase, LpxA family; transferase, LpxA family 4646598..4647203 Cyclobacterium marinum DSM 745 11035755 YP_004775811.1 CDS Cycma_3871 NC_015914.1 4648005 4648592 D PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fba:FIC_01412 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: Cyclic nucleotide-binding; SPTR: transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator 4648005..4648592 Cyclobacterium marinum DSM 745 11035757 YP_004775812.1 CDS Cycma_3872 NC_015914.1 4648684 4649403 D KEGG: ppn:Palpr_0452 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4648684..4649403 Cyclobacterium marinum DSM 745 11035758 YP_004775813.1 CDS Cycma_3873 NC_015914.1 4649408 4650175 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; fatty acid hydroxylase 4649408..4650175 Cyclobacterium marinum DSM 745 11035759 YP_004775814.1 CDS Cycma_3874 NC_015914.1 4650592 4650840 D hypothetical protein 4650592..4650840 Cyclobacterium marinum DSM 745 11035760 YP_004775815.1 CDS Cycma_3875 NC_015914.1 4650884 4651765 R PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: lby:Lbys_3373 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; bile acid:sodium symporter complement(4650884..4651765) Cyclobacterium marinum DSM 745 11035761 YP_004775816.1 CDS Cycma_3876 NC_015914.1 4651809 4653077 R PFAM: ADP-ribosylglycohydrolase; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylglycohydrolase superfamily; ADP-ribosylation/Crystallin J1 complement(4651809..4653077) Cyclobacterium marinum DSM 745 11035762 YP_004775817.1 CDS Cycma_3877 NC_015914.1 4653064 4654035 R PFAM: Phosphotransferase enzyme family; COGs: COG4857 kinase; InterPro IPR002575; KEGG: rbi:RB2501_08800 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SPTR: phosphotransferase enzyme family protein; aminoglycoside phosphotransferase complement(4653064..4654035) Cyclobacterium marinum DSM 745 11035763 YP_004775818.1 CDS Cycma_3878 NC_015914.1 4654168 4657113 D PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; SPTR: D-lactate dehydrogenase (Cytochrome); FAD linked oxidase domain-containing protein 4654168..4657113 Cyclobacterium marinum DSM 745 11035764 YP_004775819.1 CDS Cycma_3879 NC_015914.1 4657448 4658053 D PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: cpi:Cpin_1095 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 4657448..4658053 Cyclobacterium marinum DSM 745 11035765 YP_004775820.1 CDS Cycma_3880 NC_015914.1 4658316 4661423 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2262 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug 4658316..4661423 Cyclobacterium marinum DSM 745 11035766 YP_004775821.1 CDS Cycma_3881 NC_015914.1 4661437 4663146 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2261 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein 4661437..4663146 Cyclobacterium marinum DSM 745 11035767 YP_004775822.1 CDS Cycma_3882 NC_015914.1 4663157 4664839 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_0798 sulfatase; PFAM: Sulfatase; SPTR: uncharacterized protein; sulfatase 4663157..4664839 Cyclobacterium marinum DSM 745 11035768 YP_004775823.1 CDS Cycma_3883 NC_015914.1 4665768 4667297 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4665768..4667297) Cyclobacterium marinum DSM 745 11035769 YP_004775824.1 CDS Cycma_3884 NC_015914.1 4667322 4669967 R PFAM: Cytochrome c; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: sli:Slin_4672 PKD domain containing protein; PFAM: Cytochrome c, class I; SPTR: Transcriptional regulator, Crp/Fnr family; cytochrome c class I complement(4667322..4669967) Cyclobacterium marinum DSM 745 11035770 YP_004775825.1 CDS Cycma_3885 NC_015914.1 4671109 4672884 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1379 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(4671109..4672884) Cyclobacterium marinum DSM 745 11035771 YP_004775826.1 CDS Cycma_3886 NC_015914.1 4672923 4676288 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR000627:IPR012910:IPR000531; KEGG: dfe:Dfer_1380 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Intradiol ring-cleavage dioxygenase, C-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(4672923..4676288) Cyclobacterium marinum DSM 745 11035772 YP_004775827.1 CDS Cycma_3887 NC_015914.1 4676474 4677529 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cly:Celly_2996 anti-FecI sigma factor FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR complement(4676474..4677529) Cyclobacterium marinum DSM 745 11035773 YP_004775828.1 CDS Cycma_3888 NC_015914.1 4677588 4678199 R PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007630:IPR014284; KEGG: sli:Slin_3388 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 4; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(4677588..4678199) Cyclobacterium marinum DSM 745 11035774 YP_004775829.1 CDS Cycma_3889 NC_015914.1 4678679 4679773 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_0804 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR 4678679..4679773 Cyclobacterium marinum DSM 745 11035775 YP_004775830.1 CDS Cycma_3890 NC_015914.1 4679922 4683224 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0714 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 4679922..4683224 Cyclobacterium marinum DSM 745 11035776 YP_004775831.1 CDS Cycma_3891 NC_015914.1 4683266 4684714 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_0713 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 4683266..4684714 Cyclobacterium marinum DSM 745 11035777 YP_004775832.1 CDS Cycma_3892 NC_015914.1 4684853 4686223 D PFAM: FAD binding domain; InterPro IPR003953; KEGG: dfe:Dfer_0712 FAD dependent oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 4684853..4686223 Cyclobacterium marinum DSM 745 11035778 YP_004775833.1 CDS Cycma_3893 NC_015914.1 4686240 4687367 D KEGG: dfe:Dfer_0711 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4686240..4687367 Cyclobacterium marinum DSM 745 11035779 YP_004775834.1 CDS Cycma_3894 NC_015914.1 4687431 4689296 R PFAM: Heparinase II/III-like protein; KEGG: heparinase II/III family protein; SPTR: uncharacterized protein; heparinase II/III family protein complement(4687431..4689296) Cyclobacterium marinum DSM 745 11035780 YP_004775835.1 CDS Cycma_3895 NC_015914.1 4689430 4690062 R PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR: uncharacterized protein; hypothetical protein complement(4689430..4690062) Cyclobacterium marinum DSM 745 11035781 YP_004775836.1 CDS Cycma_3896 NC_015914.1 4690428 4692020 D PFAM: Aminotransferase class-V; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR000192; KEGG: sus:Acid_6148 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein; class V aminotransferase 4690428..4692020 Cyclobacterium marinum DSM 745 11035782 YP_004775837.1 CDS Cycma_3897 NC_015914.1 4692407 4695685 D PFAM: ASPIC and UnbV; InterPro IPR013517; KEGG: zpr:ZPR_2446 FG-GAP repeat-containing protein; PFAM: FG-GAP; SPTR: FG-GAP repeat-containing protein; hypothetical protein 4692407..4695685 Cyclobacterium marinum DSM 745 11035783 YP_004775838.1 CDS Cycma_3898 NC_015914.1 4695918 4697588 R PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_1899 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein complement(4695918..4697588) Cyclobacterium marinum DSM 745 11035784 YP_004775839.1 CDS Cycma_3899 NC_015914.1 4697608 4700673 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1900 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor plug complement(4697608..4700673) Cyclobacterium marinum DSM 745 11035785 YP_004775840.1 CDS Cycma_3900 NC_015914.1 4701189 4702436 D KEGG: pbs:Plabr_1908 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4701189..4702436 Cyclobacterium marinum DSM 745 11035786 YP_004775841.1 CDS Cycma_3901 NC_015914.1 4702495 4703928 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psn:Pedsa_0059 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 4702495..4703928 Cyclobacterium marinum DSM 745 11035787 YP_004775842.1 CDS Cycma_3902 NC_015914.1 4704235 4704951 D PFAM: Protein of unknown function DUF88; InterPro IPR002790; KEGG: gfo:GFO_1754 hypothetical protein; PFAM: Protein of unknown function DUF88; SPTR: Protein containing DUF88; hypothetical protein 4704235..4704951 Cyclobacterium marinum DSM 745 11035788 YP_004775843.1 CDS Cycma_3903 NC_015914.1 4704958 4706310 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003661:IPR003594; KEGG: mtt:Ftrac_0407 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(4704958..4706310) Cyclobacterium marinum DSM 745 11035789 YP_004775844.1 CDS Cycma_3904 NC_015914.1 4706571 4707848 D PFAM: Protein of unknown function (DUF445); COGs: COG2733 membrane protein; InterPro IPR007383; KEGG: lhk:LHK_03015 hypothetical protein; PFAM: Protein of unknown function DUF445, transmembrane; SPTR: DUF445 domain containing protein; hypothetical protein 4706571..4707848 Cyclobacterium marinum DSM 745 11035790 YP_004775845.1 CDS Cycma_3905 NC_015914.1 4707980 4708960 D PFAM: Endonuclease/Exonuclease/phosphatase; InterPro IPR005135; KEGG: cse:Cseg_1208 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein 4707980..4708960 Cyclobacterium marinum DSM 745 11035791 YP_004775846.1 CDS Cycma_3906 NC_015914.1 4709005 4710423 D PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: lby:Lbys_0011 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: secreted protein; rhodanese-like protein 4709005..4710423 Cyclobacterium marinum DSM 745 11035792 YP_004775847.1 CDS Cycma_3907 NC_015914.1 4710469 4712469 D PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193:IPR006047:IPR006048:IPR006589; KEGG: chu:CHU_1345 glycogen branching protein; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Candidate glycogen branching enzyme, glycoside hydrolase 13 protein; glycoside hydrolase 4710469..4712469 Cyclobacterium marinum DSM 745 11035793 YP_004775848.1 CDS Cycma_3908 NC_015914.1 4712584 4713930 D PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: rbi:RB2501_02685 potassium transporter peripheral membrane component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Trk system potassium uptake protein TrkA; TrkA-N domain-containing protein 4712584..4713930 Cyclobacterium marinum DSM 745 11035794 YP_004775849.1 CDS Cycma_3909 NC_015914.1 4713963 4715384 D PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: cao:Celal_2250 cation transporter; PFAM: Cation transporter; SPTR: Trk system potassium uptake protein TrkH; cation transporter 4713963..4715384 Cyclobacterium marinum DSM 745 11035795 YP_004775850.1 CDS Cycma_3910 NC_015914.1 4715401 4716168 D PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family; COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: mtt:Ftrac_0865 phenazine biosynthesis phzc/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis PhzC/PhzF protein 4715401..4716168 Cyclobacterium marinum DSM 745 11035796 YP_004775851.1 CDS Cycma_3911 NC_015914.1 4716471 4717295 D PFAM: Amino acid kinase; TIGRFAM: carbamate kinase; acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048:IPR004662; KEGG: mae:Maeo_0127 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; acetylglutamate kinase 4716471..4717295 Cyclobacterium marinum DSM 745 11035797 YP_004775852.1 CDS Cycma_3912 NC_015914.1 4717298 4718500 D PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR005814:IPR004636; KEGG: mfs:MFS40622_1451 acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; SPTR: Acetylornithine transaminase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; acetylornithine/succinyldiaminopimelateaminotran sferase 4717298..4718500 Cyclobacterium marinum DSM 745 11035798 YP_004775853.1 CDS Cycma_3913 NC_015914.1 4718472 4719533 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; InterPro IPR000534:IPR012280:IPR000706; KEGG: aar:Acear_1552 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase 2; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; N-acetyl-gamma-glutamyl-phosphate reductase 4718472..4719533 Cyclobacterium marinum DSM 745 11035799 YP_004775854.1 CDS Cycma_3914 NC_015914.1 4719547 4720758 D PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); HAMAP: Arginine biosynthesis protein ArgJ; InterPro IPR002813; KEGG: chy:CHY_2264 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; PFAM: Arginine biosynthesis protein ArgJ; SPTR: Glutamate N-acetyltransferase/amino-acid acetyltransferase; TIGRFAM: Arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 4719547..4720758 Cyclobacterium marinum DSM 745 11035800 YP_004775855.1 CDS Cycma_3915 NC_015914.1 4720928 4721467 R hypothetical protein complement(4720928..4721467) Cyclobacterium marinum DSM 745 11035801 YP_004775856.1 CDS Cycma_3916 NC_015914.1 4721699 4723453 D PFAM: Cytochrome c; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: dfe:Dfer_2444 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: uncharacterized protein; cytochrome c class I 4721699..4723453 Cyclobacterium marinum DSM 745 11035802 YP_004775857.1 CDS Cycma_3917 NC_015914.1 4724178 4725566 R PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: mtt:Ftrac_3244 orn/dap/arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Arginine decarboxylase, biosynthetic; Orn/DAP/Arg decarboxylase 2 complement(4724178..4725566) Cyclobacterium marinum DSM 745 11035803 YP_004775858.1 CDS Cycma_3918 NC_015914.1 4725799 4727874 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Tetratricopeptide repeat; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR001440:IPR003661:IPR003594:IPR019734; KEGG: dfe:Dfer_1606 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide repeat; SPTR: Integral membrane sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(4725799..4727874) Cyclobacterium marinum DSM 745 11035804 YP_004775859.1 CDS Cycma_3919 NC_015914.1 4728191 4728802 R PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: shg:Sph21_4749 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: uncharacterized protein; TetR family transcriptional regulator complement(4728191..4728802) Cyclobacterium marinum DSM 745 11035805 YP_004775860.1 CDS Cycma_3920 NC_015914.1 4729007 4732228 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_4748 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein; TonB-dependent receptor plug 4729007..4732228 Cyclobacterium marinum DSM 745 11035806 YP_004775861.1 CDS Cycma_3921 NC_015914.1 4732242 4734038 D PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_4747 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein 4732242..4734038 Cyclobacterium marinum DSM 745 11035807 YP_004775862.1 CDS Cycma_3922 NC_015914.1 4734135 4735364 D PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: dfe:Dfer_3392 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 4734135..4735364 Cyclobacterium marinum DSM 745 11035889 YP_004775863.1 CDS Cycma_3923 NC_015914.1 4735470 4737680 D PFAM: Domain of unknown function (DUF1083); KEGG: membrane associated hydrolase; SPTR: uncharacterized protein; membrane associated hydrolase 4735470..4737680 Cyclobacterium marinum DSM 745 11035890 YP_004775864.1 CDS Cycma_3924 NC_015914.1 4738027 4740336 R KEGG: dfe:Dfer_4312 two component regulator propeller domain protein; SPTR: Two component regulator propeller domain protein; hypothetical protein complement(4738027..4740336) Cyclobacterium marinum DSM 745 11035891 YP_004775865.1 CDS Cycma_3925 NC_015914.1 4740924 4741874 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_2943 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: transcriptional regulator; AraC family transcriptional regulator complement(4740924..4741874) Cyclobacterium marinum DSM 745 11035892 YP_004775866.1 CDS Cycma_3926 NC_015914.1 4742038 4743564 D PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: mtt:Ftrac_0952 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase; aldehyde dehydrogenase 4742038..4743564 Cyclobacterium marinum DSM 745 11035893 YP_004775867.1 CDS Cycma_3927 NC_015914.1 4743580 4744026 D PFAM: Protein of unknown function (DUF779); COGs: COG3564 conserved hypothetical protein; InterPro IPR008497; KEGG: mtt:Ftrac_0951 hypothetical protein; PFAM: Protein of unknown function DUF779; SPTR: UDP-glucose 4-epimerase; hypothetical protein 4743580..4744026 Cyclobacterium marinum DSM 745 11035894 YP_004775868.1 CDS Cycma_3928 NC_015914.1 4744078 4745874 R PFAM: Amidohydrolase; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: mtt:Ftrac_3125 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase 3; amidohydrolase complement(4744078..4745874) Cyclobacterium marinum DSM 745 11035895 YP_004775869.1 CDS Cycma_3929 NC_015914.1 4745864 4746181 R KEGG: rbi:RB2501_07715 hypothetical protein; SPTR: Antibiotic biosynthesis monooxygenase domain protein; hypothetical protein complement(4745864..4746181) Cyclobacterium marinum DSM 745 11035896 YP_004775870.1 CDS Cycma_3930 NC_015914.1 4746458 4747840 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: cytochrome bd ubiquinol oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR: cytochrome bd-I oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 4746458..4747840 Cyclobacterium marinum DSM 745 11035897 YP_004775871.1 CDS Cycma_3931 NC_015914.1 4747847 4748884 D PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: cytochrome bd-I oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 4747847..4748884 Cyclobacterium marinum DSM 745 11035898 YP_004775872.1 CDS Cycma_3932 NC_015914.1 4748996 4749907 D PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: npu:Npun_R6059 SMP-30/gluconolaconase/LRE domain-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: SMP-30/Gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE-like region-containing protein 4748996..4749907 Cyclobacterium marinum DSM 745 11035899 YP_004775873.1 CDS Cycma_3933 NC_015914.1 4749918 4751183 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: acm:AciX9_3790 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; mandelate racemase 4749918..4751183 Cyclobacterium marinum DSM 745 11035900 YP_004775874.1 CDS Cycma_3934 NC_015914.1 4751405 4752865 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216 arylsulfatase; PFAM: Sulfatase; SPTR: arylsulfatase; sulfatase 4751405..4752865 Cyclobacterium marinum DSM 745 11035901 YP_004775875.1 CDS Cycma_3935 NC_015914.1 4752893 4754482 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_05235 secreted sulfatase YdeN; PFAM: Sulfatase; SPTR: secreted sulfatase ydeN; sulfatase 4752893..4754482 Cyclobacterium marinum DSM 745 11035902 YP_004775876.1 CDS Cycma_3936 NC_015914.1 4754734 4756503 R PFAM: Citrate transporter; TrkA-C domain; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: dol:Dole_1094 TrkA domain-containing protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR: TrkA-C domain protein; TrkA-C domain-containing protein complement(4754734..4756503) Cyclobacterium marinum DSM 745 11035903 YP_004775877.1 CDS Cycma_3937 NC_015914.1 4756510 4758807 R PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090:IPR002655; KEGG: mtt:Ftrac_1371 acyl-CoA oxidase domain-containing protein; PFAM: Acyl-CoA oxidase, C-terminal; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; SPTR: Acyl-CoA oxidase domain-containing protein; acyl-CoA oxidase complement(4756510..4758807) Cyclobacterium marinum DSM 745 11035904 YP_004775878.1 CDS Cycma_3938 NC_015914.1 4759129 4760559 R PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: shg:Sph21_0204 amino acid carrier protein; PFAM: Sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein complement(4759129..4760559) Cyclobacterium marinum DSM 745 11035905 YP_004775879.1 CDS Cycma_3939 NC_015914.1 4761144 4761971 D COGs: COG2996 conserved hypothetical protein; KEGG: dfe:Dfer_5129 RNA binding S1 domain protein; SPTR: YitL protein; RNA binding S1 domain-containing protein 4761144..4761971 Cyclobacterium marinum DSM 745 11035906 YP_004775880.1 CDS Cycma_3940 NC_015914.1 4762150 4763073 D PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: lby:Lbys_2938 rok family protein; PFAM: ROK; SPTR: Glucokinase; ROK family protein 4762150..4763073 Cyclobacterium marinum DSM 745 11035907 YP_004775881.1 CDS Cycma_3941 NC_015914.1 4763063 4763455 R KEGG: sli:Slin_5550 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4763063..4763455) Cyclobacterium marinum DSM 745 11035908 YP_004775882.1 CDS Cycma_3942 NC_015914.1 4763547 4765847 R KEGG: sus:Acid_3712 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4763547..4765847) Cyclobacterium marinum DSM 745 11035909 YP_004775883.1 CDS Cycma_3943 NC_015914.1 4766130 4766702 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: shg:Sph21_3633 transcriptional regulator, TetR family; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: TetR family transcriptional regulator Member; TetR family transcriptional regulator 4766130..4766702 Cyclobacterium marinum DSM 745 11035910 YP_004775884.1 CDS Cycma_3944 NC_015914.1 4766746 4767858 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cat:CA2559_10068 secretion protein HlyD; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 4766746..4767858 Cyclobacterium marinum DSM 745 11035911 YP_004775885.1 CDS Cycma_3945 NC_015914.1 4767865 4771005 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: zpr:ZPR_0292 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family membrane transporter; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 4767865..4771005 Cyclobacterium marinum DSM 745 11035912 YP_004775886.1 CDS Cycma_3946 NC_015914.1 4771011 4772402 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: zpr:ZPR_0291 OprM-like outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: OprM-like outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 4771011..4772402 Cyclobacterium marinum DSM 745 11035913 YP_004775887.1 CDS Cycma_3947 NC_015914.1 4773006 4775378 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor complement(4773006..4775378) Cyclobacterium marinum DSM 745 11035914 YP_004775888.1 CDS Cycma_3948 NC_015914.1 4775541 4776611 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: two-component system sensor but no kinase domain; signal transduction histidine kinase 4775541..4776611 Cyclobacterium marinum DSM 745 11035915 YP_004775889.1 CDS Cycma_3949 NC_015914.1 4776613 4777317 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_05435 two-component system response regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator protein; LytTR family two component transcriptional regulator 4776613..4777317 Cyclobacterium marinum DSM 745 11035916 YP_004775890.1 CDS Cycma_3950 NC_015914.1 4777323 4778156 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: gfo:GFO_1721 secreted protein containing DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Secreted protein containing DUF1080; hypothetical protein complement(4777323..4778156) Cyclobacterium marinum DSM 745 11035917 YP_004775891.1 CDS Cycma_3951 NC_015914.1 4778196 4780430 R PFAM: Sulfate transporter family; Carbonic anhydrase; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR001765; KEGG: lbf:LBF_1643 bifunctional permease/carbonic anhydrase; PFAM: Sulphate transporter; Carbonic anhydrase; SPTR: permease, MFS superfamily; sulfate transporter; membrane protein; signal peptide; sulfate transporter complement(4778196..4780430) Cyclobacterium marinum DSM 745 11035918 YP_004775892.1 CDS Cycma_3952 NC_015914.1 4780671 4781969 D PFAM: isoform II; COGs: COG4188 dienelactone hydrolase; InterPro IPR005065; KEGG: sli:Slin_3493 dienelactone hydrolase-like protein; PFAM: Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II; SPTR: Dienelactone hydrolase-like protein; hypothetical protein 4780671..4781969 Cyclobacterium marinum DSM 745 11035919 YP_004775893.1 CDS Cycma_3953 NC_015914.1 4782020 4782538 D KEGG: bfr:BF1472 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4782020..4782538 Cyclobacterium marinum DSM 745 11035920 YP_004775894.1 CDS Cycma_3954 NC_015914.1 4783035 4784882 D PFAM: CBS domain; Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644; KEGG: cpi:Cpin_0552 chloride channel core; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Voltage-gated family Cl-channel; Cl- channel voltage-gated family protein 4783035..4784882 Cyclobacterium marinum DSM 745 11035921 YP_004775895.1 CDS Cycma_3955 NC_015914.1 4785419 4786054 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: chu:CHU_3466 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; SPTR: Antioxidant protein LsfA; alkyl hydroperoxide reductase 4785419..4786054 Cyclobacterium marinum DSM 745 11035924 YP_004775896.1 CDS Cycma_3956 NC_015914.1 4786420 4787505 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751:IPR013747; KEGG: ppn:Palpr_1842 beta-ketoacyL-AcyL-carrier-protein synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; SPTR: Beta-ketoacyl-acyl-carrier-protein synthase III; 3-oxoacyl-ACP synthase 4786420..4787505 Cyclobacterium marinum DSM 745 11035925 YP_004775897.1 CDS Cycma_3957 NC_015914.1 4787523 4788356 D PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: gfo:GFO_1704 amidohydrolase; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase; amidohydrolase 4787523..4788356 Cyclobacterium marinum DSM 745 11035926 YP_004775898.1 CDS Cycma_3958 NC_015914.1 4788372 4788701 D PFAM: Domain of unknown function (DUF718); InterPro IPR008000; KEGG: dfe:Dfer_5741 protein of unknown function DUF718; PFAM: Rhamnose mutarotase; SPTR: uncharacterized protein; hypothetical protein 4788372..4788701 Cyclobacterium marinum DSM 745 11035927 YP_004775899.1 CDS Cycma_3959 NC_015914.1 4788887 4790785 R PFAM: Receptor L domain; InterPro IPR000494; KEGG: zpr:ZPR_1515 leucine-rich protein; PFAM: EGF receptor, L domain; SPTR: uncharacterized protein; epidermal growth-factor receptor (EGFR) L domain-containing protein complement(4788887..4790785) Cyclobacterium marinum DSM 745 11035928 YP_004775900.1 CDS Cycma_3960 NC_015914.1 4790782 4792701 R PFAM: Receptor L domain; KEGG: cao:Celal_3252 epidermal growth-factor receptor (egfr) l domain protein; SPTR: Maf-like protein; hypothetical protein complement(4790782..4792701) Cyclobacterium marinum DSM 745 11035929 YP_004775901.1 CDS Cycma_3961 NC_015914.1 4792965 4793588 D PFAM: Methyltransferase domain; KEGG: lic:LIC11062 hypothetical protein; SPTR: Methyltransferase; hypothetical protein 4792965..4793588 Cyclobacterium marinum DSM 745 11035930 YP_004775902.1 CDS Cycma_3962 NC_015914.1 4793685 4795052 R PFAM: NAD(P) transhydrogenase beta subunit; COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR004003; KEGG: NAD(P)(+) transhydrogenase; PFAM: NAD(P) transhydrogenase, beta subunit; SPTR: NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase beta subunit complement(4793685..4795052) Cyclobacterium marinum DSM 745 11035931 YP_004775903.1 CDS Cycma_3963 NC_015914.1 4795058 4795375 R COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: cpi:Cpin_6490 pyridine nucleotide transhydrogenase subunit alpha; SPTR: Pyridine nucleotide transhydrogenase subunit alpha; pyridine nucleotide transhydrogenase subunit alpha complement(4795058..4795375) Cyclobacterium marinum DSM 745 11035932 YP_004775904.1 CDS Cycma_3964 NC_015914.1 4795377 4796489 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR007886:IPR007698; KEGG: cpi:Cpin_6491 NAD(P)(+) transhydrogenase (AB-specific); PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; SPTR: NAD(P)(+) transhydrogenase (AB-specific); alanine dehydrogenase complement(4795377..4796489) Cyclobacterium marinum DSM 745 11035933 YP_004775905.1 CDS Cycma_3965 NC_015914.1 4797045 4798304 D KEGG: fbc:FB2170_08859 acetyl xylan esterase; SPTR: Probable acetyl xylan esterase; acetyl xylan esterase 4797045..4798304 Cyclobacterium marinum DSM 745 11035934 YP_004775906.1 CDS Cycma_3966 NC_015914.1 4798464 4799531 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: bch:Bcen2424_6032 dihydrokaempferol 4-reductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4798464..4799531) Cyclobacterium marinum DSM 745 11035935 YP_004775907.1 CDS Cycma_3967 NC_015914.1 4799973 4800653 R InterPro IPR001236; KEGG: bwe:BcerKBAB4_0840 hypothetical protein; PFAM: Lactate/malate dehydrogenase; SPTR: uncharacterized protein; lactate/malate dehydrogenase complement(4799973..4800653) Cyclobacterium marinum DSM 745 11035936 YP_004775908.1 CDS Cycma_3968 NC_015914.1 4800660 4801577 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005:IPR018060; KEGG: cat:CA2559_10093 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(4800660..4801577) Cyclobacterium marinum DSM 745 11035937 YP_004775909.1 CDS Cycma_3969 NC_015914.1 4801733 4802689 R KEGG: nca:Noca_4903 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4801733..4802689) Cyclobacterium marinum DSM 745 11035938 YP_004775910.1 CDS Cycma_3970 NC_015914.1 4802987 4803349 R KEGG: zpr:ZPR_3965 hypothetical protein; SPTR: Membrane protein; hypothetical protein complement(4802987..4803349) Cyclobacterium marinum DSM 745 11035939 YP_004775911.1 CDS Cycma_3971 NC_015914.1 4803415 4803993 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: zpr:ZPR_3966 cyclic nucleotide-binding domain protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein; Crp/Fnr family transcriptional regulator complement(4803415..4803993) Cyclobacterium marinum DSM 745 11035940 YP_004775912.1 CDS Cycma_3972 NC_015914.1 4804162 4804581 R PFAM: Domain of unknown function (DU1801); KEGG: mtt:Ftrac_2345 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4804162..4804581) Cyclobacterium marinum DSM 745 11035941 YP_004775913.1 CDS Cycma_3973 NC_015914.1 4804592 4805056 R PFAM: Bacterial transcription activator, effector binding domain; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: cpi:Cpin_2865 transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding; SPTR: Bacterial regulatory protein, DeoR family; transcription activator effector binding protein complement(4804592..4805056) Cyclobacterium marinum DSM 745 11035942 YP_004775914.1 CDS Cycma_3974 NC_015914.1 4805090 4805821 R PFAM: HTH domain; COGs: COG2378 transcriptional regulator protein; InterPro IPR013196; KEGG: cly:Celly_2188 DeoR family transcriptional regulator; SPTR: DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(4805090..4805821) Cyclobacterium marinum DSM 745 11035943 YP_004775915.1 CDS Cycma_3975 NC_015914.1 4806012 4806911 D PFAM: neutral zinc metallopeptidase; COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: cao:Celal_0411 hypothetical protein; PFAM: Protein of unknown function, zinc metallopeptidase SPTR: uncharacterized protein; hypothetical protein 4806012..4806911 Cyclobacterium marinum DSM 745 11035944 YP_004775916.1 CDS Cycma_3976 NC_015914.1 4806991 4809210 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cao:Celal_0191 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Probable tonB-dependent receptor; TonB-dependent receptor complement(4806991..4809210) Cyclobacterium marinum DSM 745 11035945 YP_004775917.1 CDS Cycma_3977 NC_015914.1 4809508 4810458 R PFAM: Protein of unknown function (DUF890); COGs: COG3129 SAM-dependent methyltransferase; HAMAP: Ribosomal RNA large subunit methyltransferase F; InterPro IPR010286:IPR016909; KEGG: fba:FIC_01717 SAM-dependent methyltransferase; PFAM: S-adenosyl-L-methionine dependent methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase F; ribosomal RNA large subunit methyltransferase F complement(4809508..4810458) Cyclobacterium marinum DSM 745 11035946 YP_004775918.1 CDS Cycma_3978 NC_015914.1 4810462 4810920 R PFAM: SpoU rRNA Methylase; TIGRFAM: rRNA methylase, , group 2; COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: fbc:FB2170_16826 RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: tRNA (cytidine/uridine-2'-O-)-methyltransferase KAOT1_11141; tRNA/rRNA methyltransferase SpoU complement(4810462..4810920) Cyclobacterium marinum DSM 745 11035947 YP_004775919.1 CDS Cycma_3979 NC_015914.1 4811183 4811401 R SPTR: uncharacterized protein; hypothetical protein complement(4811183..4811401) Cyclobacterium marinum DSM 745 11035948 YP_004775920.1 CDS Cycma_3980 NC_015914.1 4811365 4811571 R SPTR: uncharacterized protein; hypothetical protein complement(4811365..4811571) Cyclobacterium marinum DSM 745 11035949 YP_004775921.1 CDS Cycma_3981 NC_015914.1 4811572 4811889 R PFAM: Peptidyl-tRNA hydrolase PTH2; KEGG: hch:HCH_06839 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4811572..4811889) Cyclobacterium marinum DSM 745 11035950 YP_004775922.1 CDS Cycma_3982 NC_015914.1 4812164 4812673 R PFAM: Redoxin; KEGG: mtt:Ftrac_0384 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4812164..4812673) Cyclobacterium marinum DSM 745 11035951 YP_004775923.1 CDS Cycma_3983 NC_015914.1 4812618 4813205 R SPTR: uncharacterized protein; hypothetical protein complement(4812618..4813205) Cyclobacterium marinum DSM 745 11035952 YP_004775924.1 CDS Cycma_3984 NC_015914.1 4813215 4814390 R KEGG: rba:RB10999 cycloinulo-oligosaccharide fructanotransferase; SPTR: Cycloinulo-oligosaccharide fructanotransferase; cycloinulo-oligosaccharide fructanotransferase complement(4813215..4814390) Cyclobacterium marinum DSM 745 11035953 YP_004775925.1 CDS Cycma_3985 NC_015914.1 4814520 4818281 R PFAM: Di-glucose binding within endoplasmic reticulum; Carbohydrate binding domain; InterPro IPR006626:IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR: uncharacterized protein; TIGRFAM: parallel beta-helix repeat containing protein; parallel beta-helix repeat containing protein complement(4814520..4818281) Cyclobacterium marinum DSM 745 11035954 YP_004775926.1 CDS Cycma_3986 NC_015914.1 4818504 4819304 R PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator; COGs: COG3228 conserved hypothetical protein; InterPro IPR010384; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF980; SPTR: uncharacterized protein; hypothetical protein complement(4818504..4819304) Cyclobacterium marinum DSM 745 11035955 YP_004775927.1 CDS Cycma_3987 NC_015914.1 4819367 4820191 D hypothetical protein 4819367..4820191 Cyclobacterium marinum DSM 745 11035956 YP_004775928.1 CDS Cycma_3988 NC_015914.1 4820221 4820514 R PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: lby:Lbys_0705 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C complement(4820221..4820514) Cyclobacterium marinum DSM 745 11035957 YP_004775929.1 CDS Cycma_3989 NC_015914.1 4820558 4821097 D hypothetical protein 4820558..4821097 Cyclobacterium marinum DSM 745 11035958 YP_004775930.1 CDS Cycma_3990 NC_015914.1 4821116 4821940 R PFAM: CHRD domain; InterPro IPR010895; KEGG: CHRD domain-containing protein; PFAM: CHRD; SMART: CHRD; SPTR: uncharacterized protein; CHRD domain-containing protein complement(4821116..4821940) Cyclobacterium marinum DSM 745 11035959 YP_004775931.1 CDS Cycma_3991 NC_015914.1 4822264 4822923 R KEGG: ran:Riean_0154 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4822264..4822923) Cyclobacterium marinum DSM 745 11035960 YP_004775932.1 CDS Cycma_3992 NC_015914.1 4823549 4825414 R KEGG: pjd:Pjdr2_0506 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4823549..4825414) Cyclobacterium marinum DSM 745 11035961 YP_004775933.1 CDS Cycma_3993 NC_015914.1 4825652 4826536 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: osp:Odosp_0005 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: uncharacterized protein; D12 class N6 adenine-specific DNA methyltransferase complement(4825652..4826536) Cyclobacterium marinum DSM 745 11035962 YP_004775934.1 CDS Cycma_3994 NC_015914.1 4826526 4827755 R SPTR: uncharacterized protein; hypothetical protein complement(4826526..4827755) Cyclobacterium marinum DSM 745 11035963 YP_004775935.1 CDS Cycma_3995 NC_015914.1 4828129 4829739 R PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: cja:CJA_3670 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4828129..4829739) Cyclobacterium marinum DSM 745 11035964 YP_004775936.1 CDS Cycma_3996 NC_015914.1 4829760 4829999 R KEGG: fbc:FB2170_13016 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4829760..4829999) Cyclobacterium marinum DSM 745 11035965 YP_004775937.1 CDS Cycma_3997 NC_015914.1 4829980 4830204 R hypothetical protein complement(4829980..4830204) Cyclobacterium marinum DSM 745 11035966 YP_004775938.1 CDS Cycma_3998 NC_015914.1 4831054 4832433 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR013027:IPR006076; KEGG: dfe:Dfer_0712 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4831054..4832433 Cyclobacterium marinum DSM 745 11035967 YP_004775939.1 CDS Cycma_3999 NC_015914.1 4832925 4834034 D KEGG: dfe:Dfer_0711 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4832925..4834034 Cyclobacterium marinum DSM 745 11035968 YP_004775940.1 CDS Cycma_4000 NC_015914.1 4834759 4835379 R PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; KEGG: cao:Celal_4097 MORN variant repeat-containing protein; SPTR: MORN variant repeat-containing protein; MORN repeat-containing protein complement(4834759..4835379) Cyclobacterium marinum DSM 745 11035969 YP_004775941.1 CDS Cycma_4001 NC_015914.1 4835463 4836359 R KEGG: cly:Celly_2852 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4835463..4836359) Cyclobacterium marinum DSM 745 11036051 YP_004775942.1 CDS Cycma_4002 NC_015914.1 4836638 4838170 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1548 sulfatase; PFAM: Sulfatase; SPTR: sulfatase; sulfatase complement(4836638..4838170) Cyclobacterium marinum DSM 745 11036052 YP_004775943.1 CDS Cycma_4003 NC_015914.1 4838201 4839736 R PFAM: Dienelactone hydrolase; COGs: COG0412 Dienelactone hydrolase; InterPro IPR019734:IPR013105; KEGG: fbc:FB2170_12996 beta-lactamase; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: uncharacterized protein; hypothetical protein complement(4838201..4839736) Cyclobacterium marinum DSM 745 11036053 YP_004775944.1 CDS Cycma_4004 NC_015914.1 4840337 4840996 R PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cao:Celal_3973 dihydropteridine reductase; PFAM: Nitroreductase-like; SPTR: Oxygen-insensitive NAD(P)H nitroreductase; nitroreductase complement(4840337..4840996) Cyclobacterium marinum DSM 745 11036054 YP_004775945.1 CDS Cycma_4005 NC_015914.1 4841092 4841436 D PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: fjo:Fjoh_0113 HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator; HxlR family transcriptional regulator 4841092..4841436 Cyclobacterium marinum DSM 745 11036055 YP_004775946.1 CDS Cycma_4006 NC_015914.1 4841466 4842008 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4841466..4842008) Cyclobacterium marinum DSM 745 11036056 YP_004775947.1 CDS Cycma_4007 NC_015914.1 4842062 4842598 R PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(4842062..4842598) Cyclobacterium marinum DSM 745 11036057 YP_004775948.1 CDS Cycma_4008 NC_015914.1 4842623 4843018 R PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; InterPro IPR000086; KEGG: NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: MutT/NUDIX family protein; NUDIX hydrolase complement(4842623..4843018) Cyclobacterium marinum DSM 745 11036058 YP_004775949.1 CDS Cycma_4009 NC_015914.1 4843133 4843786 R InterPro IPR001258; KEGG: dvi:Dvir_GJ18454 GJ18454 gene product from transcript GJ18454-RA; PFAM: NHL repeat; SPTR: surface layer protein; NHL repeat containing protein complement(4843133..4843786) Cyclobacterium marinum DSM 745 11036059 YP_004775950.1 CDS Cycma_4010 NC_015914.1 4843837 4844079 R hypothetical protein complement(4843837..4844079) Cyclobacterium marinum DSM 745 11036060 YP_004775951.1 CDS Cycma_4011 NC_015914.1 4844256 4844408 R hypothetical protein complement(4844256..4844408) Cyclobacterium marinum DSM 745 11036061 YP_004775952.1 CDS Cycma_4013 NC_015914.1 4846769 4847392 R KEGG: dfe:Dfer_0778 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4846769..4847392) Cyclobacterium marinum DSM 745 11036063 YP_004775953.1 CDS Cycma_4014 NC_015914.1 4847478 4848059 R PFAM: Cyclic nucleotide-binding domain; KEGG: dfe:Dfer_0777 transcriptional regulator, Crp/Fnr family; SPTR: transcriptional regulator, Crp/Fnr family; Crp/Fnr family transcriptional regulator complement(4847478..4848059) Cyclobacterium marinum DSM 745 11036064 YP_004775954.1 CDS Cycma_4015 NC_015914.1 4848240 4848689 D PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: dsy:DSY4606 hypothetical protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: uncharacterized protein; regulatory protein ArsR 4848240..4848689 Cyclobacterium marinum DSM 745 11036065 YP_004775955.1 CDS Cycma_4016 NC_015914.1 4848802 4849854 D PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: dsy:DSY4605 hypothetical protein; PFAM: Protein of unknown function DUF318, transmembrane; SPTR: uncharacterized protein; hypothetical protein 4848802..4849854 Cyclobacterium marinum DSM 745 11036066 YP_004775956.1 CDS Cycma_4017 NC_015914.1 4850332 4851384 R PFAM: CBS domain; Domain of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644; KEGG: rmr:Rmar_0830 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; SPTR: CBS domain protein; hypothetical protein complement(4850332..4851384) Cyclobacterium marinum DSM 745 11036067 YP_004775957.1 CDS Cycma_4018 NC_015914.1 4851781 4854609 D PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001:IPR001650:IPR000330; KEGG: caa:Caka_2007 SNF2-related protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: SNF2-related protein; SNF2-like protein 4851781..4854609 Cyclobacterium marinum DSM 745 11036068 YP_004775958.1 CDS Cycma_4019 NC_015914.1 4854661 4855665 D PFAM: DHH family; DHHA1 domain; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: chu:CHU_2395 hypothetical protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: uncharacterized protein; phosphoesterase RecJ domain-containing protein 4854661..4855665 Cyclobacterium marinum DSM 745 11036069 YP_004775959.1 CDS Cycma_4020 NC_015914.1 4855722 4856816 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: mev:Metev_0374 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Histidine kinase; histidine kinase complement(4855722..4856816) Cyclobacterium marinum DSM 745 11036070 YP_004775960.1 CDS Cycma_4021 NC_015914.1 4857085 4858701 R PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310:IPR012309; KEGG: dsh:Dshi_2589 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; SPTR: DNA ligase; ATP dependent DNA ligase complement(4857085..4858701) Cyclobacterium marinum DSM 745 11036071 YP_004775961.1 CDS Cycma_4022 NC_015914.1 4858698 4859714 R PFAM: Metallo-beta-lactamase superfamily; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4858698..4859714) Cyclobacterium marinum DSM 745 11036072 YP_004775962.1 CDS Cycma_4023 NC_015914.1 4860068 4861294 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: shg:Sph21_0683 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase domain protein; transposase IS4 family protein complement(4860068..4861294) Cyclobacterium marinum DSM 745 11036073 YP_004775963.1 CDS Cycma_4024 NC_015914.1 4861432 4861812 R PFAM: DoxX; InterPro IPR011637; KEGG: chu:CHU_1111 hypothetical protein; PFAM: DoxX; SPTR: uncharacterized protein; DoxX family protein complement(4861432..4861812) Cyclobacterium marinum DSM 745 11036074 YP_004775964.1 CDS Cycma_4025 NC_015914.1 4861922 4862266 D PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: chu:CHU_3624 hypothetical protein; PFAM: Helix-turn-helix, HxlR type; SPTR: uncharacterized protein; HxlR family transcriptional regulator 4861922..4862266 Cyclobacterium marinum DSM 745 11036075 YP_004775965.1 CDS Cycma_4026 NC_015914.1 4862396 4863433 R PFAM: Porphyromonas-type peptidyl-arginine deiminase; COGs: COG2957 Peptidylarginine deiminase; InterPro IPR007466; KEGG: zpr:ZPR_2018 agmatine deiminase; PFAM: Peptidyl-arginine deiminase, Porphyromonas-type; SPTR: Agmatine deiminase; porphyromonas-type peptidyl-arginine deiminase complement(4862396..4863433) Cyclobacterium marinum DSM 745 11036076 YP_004775966.1 CDS Cycma_4027 NC_015914.1 4863435 4864325 R PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: zpr:ZPR_2019 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4863435..4864325) Cyclobacterium marinum DSM 745 11036077 YP_004775967.1 CDS Cycma_4028 NC_015914.1 4864800 4866041 R KEGG: cao:Celal_2164 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4864800..4866041) Cyclobacterium marinum DSM 745 11036078 YP_004775968.1 CDS Cycma_4029 NC_015914.1 4866486 4867694 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold protein; oxidoreductase domain-containing protein complement(4866486..4867694) Cyclobacterium marinum DSM 745 11036079 YP_004775969.1 CDS Cycma_4030 NC_015914.1 4867787 4869217 R PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family; InterPro IPR012669; KEGG: pbs:Plabr_0264 pectic acid lyase; PFAM: Pectic acid lyase; SPTR: uncharacterized protein; pectic acid lyase complement(4867787..4869217) Cyclobacterium marinum DSM 745 11036080 YP_004775970.1 CDS Cycma_4031 NC_015914.1 4869408 4870439 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_3154 membrane protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(4869408..4870439) Cyclobacterium marinum DSM 745 11036081 YP_004775971.1 CDS Cycma_4032 NC_015914.1 4870436 4876156 R PFAM: PKD domain; InterPro IPR000601; KEGG: lby:Lbys_0384 hypothetical protein; PFAM: PKD; SPTR: uncharacterized protein; PKD domain-containing protein complement(4870436..4876156) Cyclobacterium marinum DSM 745 11036082 YP_004775972.1 CDS Cycma_4033 NC_015914.1 4876394 4877401 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_3154 membrane protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(4876394..4877401) Cyclobacterium marinum DSM 745 11036083 YP_004775973.1 CDS Cycma_4034 NC_015914.1 4877419 4883106 R PFAM: PKD domain; InterPro IPR000601; KEGG: lby:Lbys_0384 hypothetical protein; PFAM: PKD; SMART: PKD; SPTR: uncharacterized protein; PKD domain-containing protein complement(4877419..4883106) Cyclobacterium marinum DSM 745 11036084 YP_004775974.1 CDS Cycma_4035 NC_015914.1 4883290 4883430 D hypothetical protein 4883290..4883430 Cyclobacterium marinum DSM 745 11036085 YP_004775975.1 CDS Cycma_4036 NC_015914.1 4883512 4885356 D PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006103; KEGG: shg:Sph21_0596 glycoside hydrolase 2 sugar binding protein; PFAM: Glycoside hydrolase 2, carbohydrate-binding; Glycoside hydrolase 2, TIM barrel; SPTR: Glycosyl hydrolase, family 2; glycoside hydrolase 4883512..4885356 Cyclobacterium marinum DSM 745 11036086 YP_004775976.1 CDS Cycma_4037 NC_015914.1 4885353 4886525 D PFAM: Aldose 1-epimerase; TIGRFAM: galactose mutarotase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: cpi:Cpin_0489 aldose 1-epimerase; PFAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; aldose 1-epimerase 4885353..4886525 Cyclobacterium marinum DSM 745 11036087 YP_004775977.1 CDS Cycma_4038 NC_015914.1 4886533 4887558 D PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: rbi:RB2501_12567 gluconolactonase (precursor); PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: Gluconolactonase (Precursor); SMP-30/gluconolaconase/LRE-like region-containing protein 4886533..4887558 Cyclobacterium marinum DSM 745 11036088 YP_004775978.1 CDS Cycma_4039 NC_015914.1 4887596 4888738 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR011777; KEGG: pca:Pcar_1376 dehydrogenase, flavoprotein containing; PFAM: FAD dependent oxidoreductase; SPTR: Dehydrogenase, flavoprotein containing; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; geranylgeranyl reductase complement(4887596..4888738) Cyclobacterium marinum DSM 745 11036089 YP_004775979.1 CDS Cycma_4040 NC_015914.1 4888747 4889103 R SPTR: uncharacterized protein; hypothetical protein complement(4888747..4889103) Cyclobacterium marinum DSM 745 11036090 YP_004775980.1 CDS Cycma_4041 NC_015914.1 4889546 4890244 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; COGs: COG0269 3-hexulose-6-phosphate synthase and related protein; InterPro IPR001754; KEGG: rba:RB5319 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1); PFAM: Orotidine 5'-phosphate decarboxylase, core; SPTR: D-arabino 3-hexulose 6-phosphate formaldehyde lyase; orotidine 5'-phosphate decarboxylase 4889546..4890244 Cyclobacterium marinum DSM 745 11036091 YP_004775981.1 CDS Cycma_4042 NC_015914.1 4890267 4891292 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: rba:RB5320 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Probable zinc-type alcohol dehydrogenase; molecular chaperone GroES 4890267..4891292 Cyclobacterium marinum DSM 745 11036092 YP_004775982.1 CDS Cycma_4043 NC_015914.1 4891295 4892086 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cbc:CbuK_1138 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 4891295..4892086 Cyclobacterium marinum DSM 745 11036093 YP_004775983.1 CDS Cycma_4044 NC_015914.1 4892109 4892996 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB5321 myo-inositol catabolism protein IolH; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2; xylose isomerase domain-containing protein 4892109..4892996 Cyclobacterium marinum DSM 745 11036094 YP_004775984.1 CDS Cycma_4045 NC_015914.1 4893048 4893920 D PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: pdi:BDI_3345 regucalcin-like protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: Regucalcin (RC); SMP-30/gluconolaconase/LRE-like region-containing protein 4893048..4893920 Cyclobacterium marinum DSM 745 11036095 YP_004775985.1 CDS Cycma_4046 NC_015914.1 4894698 4895996 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_12076 dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable dehydrogenase; oxidoreductase domain-containing protein 4894698..4895996 Cyclobacterium marinum DSM 745 11036096 YP_004775986.1 CDS Cycma_4047 NC_015914.1 4896023 4896784 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: phe:Phep_1607 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein 4896023..4896784 Cyclobacterium marinum DSM 745 11036097 YP_004775987.1 CDS Cycma_4048 NC_015914.1 4896809 4897690 D PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: dfe:Dfer_1403 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 4896809..4897690 Cyclobacterium marinum DSM 745 11036098 YP_004775988.1 CDS Cycma_4049 NC_015914.1 4897708 4900821 D PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR004155:IPR013427; KEGG: plm:Plim_1436 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: haem-binding region; heme-binding protein 4897708..4900821 Cyclobacterium marinum DSM 745 11036099 YP_004775989.1 CDS Cycma_4050 NC_015914.1 4900856 4901683 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: acm:AciX9_3799 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein 4900856..4901683 Cyclobacterium marinum DSM 745 11036100 YP_004775990.1 CDS Cycma_4051 NC_015914.1 4901756 4902832 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 4901756..4902832 Cyclobacterium marinum DSM 745 11036101 YP_004775991.1 CDS Cycma_4052 NC_015914.1 4902897 4903898 D PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: sli:Slin_3957 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; SPTR: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; 3-hydroxyacyl-CoA dehydrogenase 4902897..4903898 Cyclobacterium marinum DSM 745 11036102 YP_004775992.1 CDS Cycma_4053 NC_015914.1 4903914 4904501 R PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; InterPro IPR010386; KEGG: mtt:Ftrac_0221 tRNA-hydroxylase; PFAM: tRNA--hydroxylase; SPTR: tRNA-hydroxylase; tRNA-hydroxylase complement(4903914..4904501) Cyclobacterium marinum DSM 745 11036103 YP_004775993.1 CDS Cycma_4054 NC_015914.1 4904609 4905889 D PFAM: Glycosyl transferase 2; KEGG: mtt:Ftrac_0219 glycosyl transferase 2; SPTR: uncharacterized protein; family 2 glycosyl transferase 4904609..4905889 Cyclobacterium marinum DSM 745 11036104 YP_004775994.1 CDS Cycma_4055 NC_015914.1 4905856 4907523 R KEGG: sli:Slin_0582 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4905856..4907523) Cyclobacterium marinum DSM 745 11036105 YP_004775995.1 CDS Cycma_4056 NC_015914.1 4907533 4909503 R hypothetical protein complement(4907533..4909503) Cyclobacterium marinum DSM 745 11036106 YP_004775996.1 CDS Cycma_4057 NC_015914.1 4909578 4909688 D hypothetical protein 4909578..4909688 Cyclobacterium marinum DSM 745 11036107 YP_004775997.1 CDS Cycma_4058 NC_015914.1 4909882 4912092 R KEGG: cpi:Cpin_1999 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4909882..4912092) Cyclobacterium marinum DSM 745 11036108 YP_004775998.1 CDS Cycma_4059 NC_015914.1 4912119 4913954 R PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; InterPro IPR000583:IPR001347:IPR005855; KEGG: cpi:Cpin_2000 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; SPTR: Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; glucosamine--fructose-6-phosphate aminotransferase complement(4912119..4913954) Cyclobacterium marinum DSM 745 11036109 YP_004775999.1 CDS Cycma_4060 NC_015914.1 4914251 4915639 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cpi:Cpin_2602 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase complement(4914251..4915639) Cyclobacterium marinum DSM 745 11036110 YP_004776000.1 CDS Cycma_4061 NC_015914.1 4915733 4916827 D KEGG: fbc:FB2170_06070 hydrolase lipoprotein; SPTR: hydrolase lipoprotein; hydrolase lipoprotein 4915733..4916827 Cyclobacterium marinum DSM 745 11036111 YP_004776001.1 CDS Cycma_4062 NC_015914.1 4917107 4918213 D COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: fbc:FB2170_06080 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: uncharacterized protein; hypothetical protein 4917107..4918213 Cyclobacterium marinum DSM 745 11036112 YP_004776002.1 CDS Cycma_4063 NC_015914.1 4918270 4919679 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: phe:Phep_0775 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 4918270..4919679 Cyclobacterium marinum DSM 745 11036113 YP_004776003.1 CDS Cycma_4064 NC_015914.1 4919745 4921364 R PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: bbe:BBR47_25560 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter complement(4919745..4921364) Cyclobacterium marinum DSM 745 11036114 YP_004776004.1 CDS Cycma_4065 NC_015914.1 4921446 4922666 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004812; KEGG: sli:Slin_3348 drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter complement(4921446..4922666) Cyclobacterium marinum DSM 745 11036115 YP_004776005.1 CDS Cycma_4066 NC_015914.1 4922889 4931003 D PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; PKD domain; Ig domain; InterPro IPR006652:IPR000601:IPR008009; KEGG: fbc:FB2170_10111 hypothetical protein; PFAM: PKD; Ig; Kelch repeat type 1; SMART: PKD; Kelch repeat type 1; SPTR: secreted protein; PKD domain-containing protein 4922889..4931003 Cyclobacterium marinum DSM 745 11036116 YP_004776006.1 CDS Cycma_4068 NC_015914.1 4932330 4933283 D PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837:IPR004481; KEGG: zpr:ZPR_3943 sodium/calcium exchanger protein; PFAM: Sodium/calcium exchanger membrane region; SPTR: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; CaCA family Na+/Ca+ antiporter 4932330..4933283 Cyclobacterium marinum DSM 745 11036118 YP_004776007.1 CDS Cycma_4069 NC_015914.1 4933758 4934189 D hypothetical protein 4933758..4934189 Cyclobacterium marinum DSM 745 11036119 YP_004776008.1 CDS Cycma_4070 NC_015914.1 4934329 4934874 D PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: tra:Trad_0962 bifunctional deaminase-reductase domain-containing protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Bifunctional deaminase-reductase domain protein; bifunctional deaminase-reductase domain-containing protein 4934329..4934874 Cyclobacterium marinum DSM 745 11036120 YP_004776009.1 CDS Cycma_4071 NC_015914.1 4935334 4936203 D KEGG: cph:Cpha266_2258 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4935334..4936203 Cyclobacterium marinum DSM 745 11036121 YP_004776010.1 CDS Cycma_4072 NC_015914.1 4936213 4937151 D KEGG: cph:Cpha266_2257 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4936213..4937151 Cyclobacterium marinum DSM 745 11036122 YP_004776011.1 CDS Cycma_4073 NC_015914.1 4937153 4938172 D PFAM: RES domain; InterPro IPR014914; KEGG: cph:Cpha266_2256 hypothetical protein; PFAM: RES; SPTR: uncharacterized protein; RES domain-containing protein 4937153..4938172 Cyclobacterium marinum DSM 745 11036123 YP_004776012.1 CDS Cycma_4074 NC_015914.1 4938421 4938762 D hypothetical protein 4938421..4938762 Cyclobacterium marinum DSM 745 11036124 YP_004776013.1 CDS Cycma_4075 NC_015914.1 4938990 4940279 D PFAM: MORN repeat variant; InterPro IPR011652; KEGG: chu:CHU_2455 glucosyltransferase-S; SPTR: Morn repeat-containing protein; hypothetical protein 4938990..4940279 Cyclobacterium marinum DSM 745 11036125 YP_004776014.1 CDS Cycma_4076 NC_015914.1 4940949 4942343 D PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: dal:Dalk_5030 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A; von Willebrand factor A 4940949..4942343 Cyclobacterium marinum DSM 745 11036126 YP_004776015.1 CDS Cycma_4078 NC_015914.1 4943980 4944306 D hypothetical protein 4943980..4944306 Cyclobacterium marinum DSM 745 11036128 YP_004776016.1 CDS Cycma_4079 NC_015914.1 4944536 4948126 R TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428:IPR013427; KEGG: sli:Slin_4779 dehydrogenase; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein complement(4944536..4948126) Cyclobacterium marinum DSM 745 11036129 YP_004776017.1 CDS Cycma_4080 NC_015914.1 4948127 4949302 R PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: dfe:Dfer_1374 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein complement(4948127..4949302) Cyclobacterium marinum DSM 745 11036130 YP_004776018.1 CDS Cycma_4081 NC_015914.1 4949569 4950735 D SPTR: uncharacterized protein; hypothetical protein 4949569..4950735 Cyclobacterium marinum DSM 745 11036131 YP_004776019.1 CDS Cycma_4082 NC_015914.1 4951446 4952012 D PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: mtt:Ftrac_3076 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; thioesterase 4951446..4952012 Cyclobacterium marinum DSM 745 11036213 YP_004776020.1 CDS Cycma_4083 NC_015914.1 4952015 4952725 R PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sli:Slin_3469 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase; type 11 methyltransferase complement(4952015..4952725) Cyclobacterium marinum DSM 745 11036214 YP_004776021.1 CDS Cycma_4084 NC_015914.1 4952819 4952974 D hypothetical protein 4952819..4952974 Cyclobacterium marinum DSM 745 11036215 YP_004776022.1 CDS Cycma_4085 NC_015914.1 4953133 4953492 D hypothetical protein 4953133..4953492 Cyclobacterium marinum DSM 745 11036216 YP_004776023.1 CDS Cycma_4086 NC_015914.1 4953720 4954166 D TIGRFAM: conserved hypothetical protein; InterPro IPR011944; KEGG: sus:Acid_5517 alpha/beta hydrolase domain-containing protein; SPTR: uncharacterized protein; alpha/beta hydrolase 4953720..4954166 Cyclobacterium marinum DSM 745 11036217 YP_004776024.1 CDS Cycma_4087 NC_015914.1 4954260 4954922 R PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: fba:FIC_01886 4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase; SPTR: KDPG and KHG aldolase; TIGRFAM: KDPG/KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(4954260..4954922) Cyclobacterium marinum DSM 745 11036218 YP_004776025.1 CDS Cycma_4088 NC_015914.1 4955011 4955463 R PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family; COGs: COG2731 Beta-galactosidase beta subunit; InterPro IPR004375; KEGG: fba:FIC_01887 conserved hypothetical protein 22; PFAM: Conserved hypothetical protein CHP00022; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00022; hypothetical protein complement(4955011..4955463) Cyclobacterium marinum DSM 745 11036219 YP_004776026.1 CDS Cycma_4089 NC_015914.1 4955484 4956509 R PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: tjr:TherJR_2254 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: PfkB domain protein; PfkB domain-containing protein complement(4955484..4956509) Cyclobacterium marinum DSM 745 11036220 YP_004776027.1 CDS Cycma_4090 NC_015914.1 4956807 4957595 R PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: vpr:Vpar_0391 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: polysaccharide deacetylase; polysaccharide deacetylase complement(4956807..4957595) Cyclobacterium marinum DSM 745 11036221 YP_004776028.1 CDS Cycma_4091 NC_015914.1 4957641 4958102 R PFAM: Protein of unknown function (DUF1456); COGs: COG4807 conserved hypothetical protein; InterPro IPR009921; KEGG: ppr:PBPRA2338 hypothetical protein; PFAM: Protein of unknown function DUF1456; SPTR: YehS; hypothetical protein complement(4957641..4958102) Cyclobacterium marinum DSM 745 11036222 YP_004776029.1 CDS Cycma_4092 NC_015914.1 4958220 4959014 D PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Possible ketoacyl reductase; short-chain dehydrogenase/reductase SDR 4958220..4959014 Cyclobacterium marinum DSM 745 11036223 YP_004776030.1 CDS Cycma_4093 NC_015914.1 4959008 4959874 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4959008..4959874) Cyclobacterium marinum DSM 745 11036224 YP_004776031.1 CDS Cycma_4095 NC_015914.1 4960630 4961229 R hypothetical protein complement(4960630..4961229) Cyclobacterium marinum DSM 745 11036226 YP_004776032.1 CDS Cycma_4096 NC_015914.1 4961579 4961989 R PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: mtt:Ftrac_1212 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4961579..4961989) Cyclobacterium marinum DSM 745 11036227 YP_004776033.1 CDS Cycma_4097 NC_015914.1 4962270 4962902 D PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable FMN-dependent enzyme, DR_2398 family; COGs: COG3576 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; InterPro IPR011576; KEGG: bcq:BCQ_1955 phosphohydrolase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4962270..4962902 Cyclobacterium marinum DSM 745 11036228 YP_004776034.1 CDS Cycma_4098 NC_015914.1 4962975 4963982 D InterPro IPR004843; KEGG: fbc:FB2170_02085 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: uncharacterized protein; metallophosphoesterase 4962975..4963982 Cyclobacterium marinum DSM 745 11036229 YP_004776035.1 CDS Cycma_4099 NC_015914.1 4964157 4966856 R PFAM: F5/8 type C domain; Cytochrome c; InterPro IPR000421; KEGG: rbi:RB2501_04230 hypothetical protein; PFAM: Coagulation factor 5/8 type, C-terminal; SPTR: L-sorbosone dehydrogenase; coagulation factor 5/8 type domain-containing protein complement(4964157..4966856) Cyclobacterium marinum DSM 745 11036230 YP_004776036.1 CDS Cycma_4100 NC_015914.1 4967184 4968260 D PFAM: Amidohydrolase; InterPro IPR006992; KEGG: cak:Caul_0314 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase 4967184..4968260 Cyclobacterium marinum DSM 745 11036231 YP_004776037.1 CDS Cycma_4101 NC_015914.1 4968354 4969376 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: sli:Slin_6146 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase; fatty acid hydroxylase 4968354..4969376 Cyclobacterium marinum DSM 745 11036232 YP_004776038.1 CDS Cycma_4102 NC_015914.1 4969590 4970606 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: cao:Celal_2520 L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: L-threonine 3-dehydrogenase; alcohol dehydrogenase 4969590..4970606 Cyclobacterium marinum DSM 745 11036233 YP_004776039.1 CDS Cycma_4103 NC_015914.1 4970603 4970842 R hypothetical protein complement(4970603..4970842) Cyclobacterium marinum DSM 745 11036234 YP_004776040.1 CDS Cycma_4104 NC_015914.1 4970897 4971667 D PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cly:Celly_0409 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 2-deoxy-D-gluconate 3-dehydrogenase; short-chain dehydrogenase/reductase SDR 4970897..4971667 Cyclobacterium marinum DSM 745 11036235 YP_004776041.1 CDS Cycma_4105 NC_015914.1 4972039 4972200 D hypothetical protein 4972039..4972200 Cyclobacterium marinum DSM 745 11036236 YP_004776042.1 CDS Cycma_4106 NC_015914.1 4972261 4974039 D COGs: COG5616 integral membrane protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 4972261..4974039 Cyclobacterium marinum DSM 745 11036237 YP_004776043.1 CDS Cycma_4107 NC_015914.1 4974365 4974664 D PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mtt:Ftrac_2931 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 4974365..4974664 Cyclobacterium marinum DSM 745 11036238 YP_004776044.1 CDS Cycma_4108 NC_015914.1 4974654 4974764 D KEGG: mtt:Ftrac_2930 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4974654..4974764 Cyclobacterium marinum DSM 745 11036239 YP_004776045.1 CDS Cycma_4110 NC_015914.1 4975206 4976408 D PFAM: Glycosyl hydrolases family 43; KEGG: cly:Celly_0406 glycosyl hydrolase 32 domain-containing protein; SPTR: 3,6-anhydro-alpha-L-galactosidase; glycosyl hydrolase domain-containing protein 4975206..4976408 Cyclobacterium marinum DSM 745 11036241 YP_004776046.1 CDS Cycma_4111 NC_015914.1 4976517 4977635 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG1062 Zn-dependent alcohol dehydrogenase class III; InterPro IPR013154:IPR013149; KEGG: gfo:GFO_1717 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Zinc-type alcohol dehydrogenase; molecular chaperone GroES 4976517..4977635 Cyclobacterium marinum DSM 745 11036242 YP_004776047.1 CDS Cycma_4112 NC_015914.1 4977650 4978456 D PFAM: esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: gfo:GFO_1718 acetylesterase; PFAM: esterase; SPTR: Acetylesterase; esterase 4977650..4978456 Cyclobacterium marinum DSM 745 11036243 YP_004776048.1 CDS Cycma_4113 NC_015914.1 4978477 4978869 R COGs: COG5499 transcription regulator containing HTH domain; KEGG: dal:Dalk_4292 transcription regulator with HTH domain; SPTR: transcription regulator with HTH domain; transcription regulator with HTH domain complement(4978477..4978869) Cyclobacterium marinum DSM 745 11036244 YP_004776049.1 CDS Cycma_4114 NC_015914.1 4978889 4979194 R PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: xne:XNC1_1350 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: membrane protein; hypothetical protein complement(4978889..4979194) Cyclobacterium marinum DSM 745 11036245 YP_004776050.1 CDS Cycma_4115 NC_015914.1 4979895 4980242 D KEGG: shg:Sph21_5039 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4979895..4980242 Cyclobacterium marinum DSM 745 11036246 YP_004776051.1 CDS Cycma_4116 NC_015914.1 4980546 4981388 D KEGG: zpr:ZPR_1581 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4980546..4981388 Cyclobacterium marinum DSM 745 11036247 YP_004776052.1 CDS Cycma_4117 NC_015914.1 4981425 4982513 D PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: dfe:Dfer_0101 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Cytochrome-c peroxidase; Di-heme cytochrome c peroxidase 4981425..4982513 Cyclobacterium marinum DSM 745 11036248 YP_004776053.1 CDS Cycma_4118 NC_015914.1 4982577 4983443 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_6093 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(4982577..4983443) Cyclobacterium marinum DSM 745 11036249 YP_004776054.1 CDS Cycma_4119 NC_015914.1 4983496 4983864 R KEGG: cpi:Cpin_6094 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(4983496..4983864) Cyclobacterium marinum DSM 745 11036250 YP_004776055.1 CDS Cycma_4120 NC_015914.1 4983958 4985106 R PFAM: XdhC and CoxI family; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: cpi:Cpin_4137 xanthine dehydrogenase; PFAM: XdhC- CoxI; SPTR: Xanthine dehydrogenase; XshC-Cox1-family protein complement(4983958..4985106) Cyclobacterium marinum DSM 745 11036251 YP_004776056.1 CDS Cycma_4121 NC_015914.1 4985111 4986307 R PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111:IPR020817; KEGG: molybdenum cofactor synthesis domain-containing protein; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis MoeA protein; TIGRFAM: Molybdenum cofactor synthesis; molybdenum cofactor synthesis domain-containing protein complement(4985111..4986307) Cyclobacterium marinum DSM 745 11036252 YP_004776057.1 CDS Cycma_4122 NC_015914.1 4986337 4987326 R PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR006638:IPR007197:IPR010505:IPR013483; KEGG: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A; molybdenum cofactor biosynthesis protein A complement(4986337..4987326) Cyclobacterium marinum DSM 745 11036253 YP_004776058.1 CDS Cycma_4123 NC_015914.1 4987363 4987776 R PFAM: MoaE protein; COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: fbc:FB2170_09356 molybdopterin (MPT) converting factor subunit 2; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin (MPT) converting factor, subunit 2; molybdopterin biosynthesis protein MoaE complement(4987363..4987776) Cyclobacterium marinum DSM 745 11036254 YP_004776059.1 CDS Cycma_4124 NC_015914.1 4987778 4988065 R PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; InterPro IPR003749; KEGG: zpr:ZPR_2976 hypothetical protein; PFAM: ThiamineS; SPTR: uncharacterized protein; sulfur carrier protein ThiS complement(4987778..4988065) Cyclobacterium marinum DSM 745 11036255 YP_004776060.1 CDS Cycma_4125 NC_015914.1 4988531 4989118 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: bvu:BVU_0109 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 4988531..4989118 Cyclobacterium marinum DSM 745 11036256 YP_004776061.1 CDS Cycma_4126 NC_015914.1 4989248 4990282 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_1919 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR 4989248..4990282 Cyclobacterium marinum DSM 745 11036257 YP_004776062.1 CDS Cycma_4127 NC_015914.1 4990322 4993783 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1413 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 4990322..4993783 Cyclobacterium marinum DSM 745 11036258 YP_004776063.1 CDS Cycma_4128 NC_015914.1 4993834 4995366 D KEGG: dfe:Dfer_1412 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 4993834..4995366 Cyclobacterium marinum DSM 745 11036259 YP_004776064.1 CDS Cycma_4129 NC_015914.1 4995522 4996295 D PFAM: HpcH/HpaI aldolase/citrate lyase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: sli:Slin_1071 4-hydroxy-2-oxovalerate aldolase; PFAM: HpcH/HpaI aldolase; SPTR: 4-hydroxy-2-oxovalerate aldolase; HpcH/HpaI aldolase 4995522..4996295 Cyclobacterium marinum DSM 745 11036260 YP_004776065.1 CDS Cycma_4130 NC_015914.1 4996300 4997733 D PFAM: GntP family permease; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: sli:Slin_1070 gluconate transporter; PFAM: Gluconate transporter; SPTR: Gluconate transporter; gluconate transporter 4996300..4997733 Cyclobacterium marinum DSM 745 11036261 YP_004776066.1 CDS Cycma_4131 NC_015914.1 4997754 4998914 D PFAM: D-mannonate dehydratase (UxuA); COGs: COG1312 D-mannonate dehydratase; InterPro IPR004628:IPR006311; KEGG: dfe:Dfer_1408 mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase; mannonate dehydratase 4997754..4998914 Cyclobacterium marinum DSM 745 11036262 YP_004776067.1 CDS Cycma_4132 NC_015914.1 4998976 4999851 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115:IPR006398; KEGG: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; SPTR: 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; 2-hydroxy-3-oxopropionate reductase 4998976..4999851 Cyclobacterium marinum DSM 745 11036263 YP_004776068.1 CDS Cycma_4133 NC_015914.1 4999869 5001182 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: sli:Slin_1068 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase/muconate lactonizing protein; mandelate racemase 4999869..5001182 Cyclobacterium marinum DSM 745 11036264 YP_004776069.1 CDS Cycma_4134 NC_015914.1 5001254 5002195 D PFAM: Demethylmenaquinone methyltransferase; KEGG: sli:Slin_6192 demethylmenaquinone methyltransferase-like protein; SPTR: uncharacterized protein; demethylmenaquinone methyltransferase-like protein 5001254..5002195 Cyclobacterium marinum DSM 745 11036265 YP_004776070.1 CDS Cycma_4135 NC_015914.1 5002324 5003601 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR006311; KEGG: sli:Slin_6193 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Starvation sensing protein; mandelate racemase 5002324..5003601 Cyclobacterium marinum DSM 745 11036266 YP_004776071.1 CDS Cycma_4136 NC_015914.1 5003618 5005105 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR006311; KEGG: Mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Galactonate dehydratase; mandelate racemase 5003618..5005105 Cyclobacterium marinum DSM 745 11036267 YP_004776072.1 CDS Cycma_4137 NC_015914.1 5005210 5006145 D PFAM: Demethylmenaquinone methyltransferase; COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: dfe:Dfer_1105 demethylmenaquinone methyltransferase-like protein; SPTR: Demethylmenaquinone methyltransferase-like protein; demethylmenaquinone methyltransferase-like protein 5005210..5006145 Cyclobacterium marinum DSM 745 11036268 YP_004776073.1 CDS Cycma_4138 NC_015914.1 5006558 5009131 R PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR001610:IPR013767:IPR013655; KEGG: mtt:Ftrac_0408 pas/pac sensor signal transduction histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAS; PAC motif; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS sensor protein complement(5006558..5009131) Cyclobacterium marinum DSM 745 11036269 YP_004776074.1 CDS Cycma_4139 NC_015914.1 5009180 5010676 R PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014:IPR013655:IPR013767; KEGG: fjo:Fjoh_4936 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAS; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor protein complement(5009180..5010676) Cyclobacterium marinum DSM 745 11036270 YP_004776075.1 CDS Cycma_4140 NC_015914.1 5011362 5011757 R KEGG: cpi:Cpin_1191 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5011362..5011757) Cyclobacterium marinum DSM 745 11036271 YP_004776076.1 CDS Cycma_4141 NC_015914.1 5011873 5012778 D PFAM: DnaJ C terminal region; DnaJ domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623:IPR002939; KEGG: shg:Sph21_0783 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: DnaJ family protein; molecular chaperone DnaJ 5011873..5012778 Cyclobacterium marinum DSM 745 11036272 YP_004776077.1 CDS Cycma_4142 NC_015914.1 5012771 5013067 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5012771..5013067 Cyclobacterium marinum DSM 745 11036273 YP_004776078.1 CDS Cycma_4143 NC_015914.1 5013379 5014731 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594; KEGG: fbc:FB2170_07824 two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: two-component system sensor histidine kinase; multi-sensor signal transduction histidine kinase complement(5013379..5014731) Cyclobacterium marinum DSM 745 11036275 YP_004776079.1 CDS Cycma_4144 NC_015914.1 5014731 5016095 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: cly:Celly_1175 fis family two component sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; Fis family transcriptional regulator complement(5014731..5016095) Cyclobacterium marinum DSM 745 11036276 YP_004776080.1 CDS Cycma_4145 NC_015914.1 5016300 5017646 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_07834 outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane transport/efflux protein; outer membrane efflux protein 5016300..5017646 Cyclobacterium marinum DSM 745 11036277 YP_004776081.1 CDS Cycma_4146 NC_015914.1 5017650 5018900 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_07839 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, MFP component, RND family protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 5017650..5018900 Cyclobacterium marinum DSM 745 11036278 YP_004776082.1 CDS Cycma_4147 NC_015914.1 5018968 5019663 D PFAM: ABC transporter; TIGRFAM: bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_07844 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter 5018968..5019663 Cyclobacterium marinum DSM 745 11036279 YP_004776083.1 CDS Cycma_4148 NC_015914.1 5019704 5022100 D PFAM: Predicted permease; InterPro IPR003838; KEGG: gfo:GFO_0712 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease); hypothetical protein 5019704..5022100 Cyclobacterium marinum DSM 745 11036280 YP_004776084.1 CDS Cycma_4149 NC_015914.1 5022195 5024627 D PFAM: Predicted permease; InterPro IPR003838; KEGG: fbc:FB2170_07854 ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, permease; hypothetical protein 5022195..5024627 Cyclobacterium marinum DSM 745 11036281 YP_004776085.1 CDS Cycma_4150 NC_015914.1 5024639 5027053 D PFAM: Predicted permease; InterPro IPR003838; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 5024639..5027053 Cyclobacterium marinum DSM 745 11036282 YP_004776086.1 CDS Cycma_4151 NC_015914.1 5027065 5029494 D PFAM: Predicted permease; InterPro IPR003838; KEGG: cly:Celly_1165 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 5027065..5029494 Cyclobacterium marinum DSM 745 11036283 YP_004776087.1 CDS Cycma_4152 NC_015914.1 5029665 5032031 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sli:Slin_0947 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 5029665..5032031 Cyclobacterium marinum DSM 745 11036284 YP_004776088.1 CDS Cycma_4153 NC_015914.1 5032069 5032737 D PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cly:Celly_1164 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Phosphonate-transporting ATPase; ABC transporter 5032069..5032737 Cyclobacterium marinum DSM 745 11036285 YP_004776089.1 CDS Cycma_4154 NC_015914.1 5033015 5033263 D hypothetical protein 5033015..5033263 Cyclobacterium marinum DSM 745 11036286 YP_004776090.1 CDS Cycma_4155 NC_015914.1 5033378 5034982 D PFAM: Sulfate transporter family; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: fjo:Fjoh_4764 sulphate transporter; PFAM: Sulphate transporter; SPTR: Sulphate transporter; sulfate transporter 5033378..5034982 Cyclobacterium marinum DSM 745 11036287 YP_004776091.1 CDS Cycma_4156 NC_015914.1 5035179 5035823 D PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: psn:Pedsa_2030 carbonic anhydrase; PFAM: Carbonic anhydrase; SPTR: Carbonic anhydrase; carbonic anhydrase 5035179..5035823 Cyclobacterium marinum DSM 745 11036288 YP_004776092.1 CDS Cycma_4157 NC_015914.1 5035950 5036171 R hypothetical protein complement(5035950..5036171) Cyclobacterium marinum DSM 745 11036289 YP_004776093.1 CDS Cycma_4158 NC_015914.1 5036205 5037611 R KEGG: mtt:Ftrac_2737 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5036205..5037611) Cyclobacterium marinum DSM 745 11036290 YP_004776094.1 CDS Cycma_4159 NC_015914.1 5038091 5040025 D PFAM: BNR/Asp-box repeat; KEGG: mbr:MONBRDRAFT_22941 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5038091..5040025 Cyclobacterium marinum DSM 745 11036291 YP_004776095.1 CDS Cycma_4160 NC_015914.1 5040460 5042823 D InterPro IPR006626; KEGG: fbc:FB2170_02135 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5040460..5042823 Cyclobacterium marinum DSM 745 11036292 YP_004776096.1 CDS Cycma_4161 NC_015914.1 5043383 5045374 D KEGG: cts:Ctha_0375 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5043383..5045374 Cyclobacterium marinum DSM 745 11036293 YP_004776097.1 CDS Cycma_4162 NC_015914.1 5045573 5047249 R KEGG: lby:Lbys_3377 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5045573..5047249) Cyclobacterium marinum DSM 745 11036375 YP_004776098.1 CDS Cycma_4163 NC_015914.1 5047268 5050657 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1904 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(5047268..5050657) Cyclobacterium marinum DSM 745 11036376 YP_004776099.1 CDS Cycma_4164 NC_015914.1 5051531 5053207 R KEGG: lby:Lbys_3377 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5051531..5053207) Cyclobacterium marinum DSM 745 11036377 YP_004776100.1 CDS Cycma_4165 NC_015914.1 5053226 5056600 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1904 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(5053226..5056600) Cyclobacterium marinum DSM 745 11036378 YP_004776101.1 CDS Cycma_4166 NC_015914.1 5057127 5057270 D hypothetical protein 5057127..5057270 Cyclobacterium marinum DSM 745 11036379 YP_004776102.1 CDS Cycma_4167 NC_015914.1 5057306 5058352 D PFAM: Glycosyl hydrolases family 43; KEGG: fbc:FB2170_02105 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5057306..5058352 Cyclobacterium marinum DSM 745 11036380 YP_004776103.1 CDS Cycma_4168 NC_015914.1 5058736 5060538 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ccb:Clocel_0960 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Two-component system sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 5058736..5060538 Cyclobacterium marinum DSM 745 11036381 YP_004776104.1 CDS Cycma_4169 NC_015914.1 5060660 5061427 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: ttu:TERTU_3750 glycoside hydrolase 3 domain-containing protein; PFAM: Lipase, GDSL; SPTR: Glycoside hydrolase 3 domain protein; G-D-S-L family lipolytic protein 5060660..5061427 Cyclobacterium marinum DSM 745 11036382 YP_004776105.1 CDS Cycma_4170 NC_015914.1 5061473 5062969 R PFAM: PA domain; Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: mtt:Ftrac_1481 peptidase M28; PFAM: Peptidase M28; SPTR: peptidase, M28 (Aminopeptidase S) family; peptidase M28 complement(5061473..5062969) Cyclobacterium marinum DSM 745 11036383 YP_004776106.1 CDS Cycma_4171 NC_015914.1 5062998 5063723 R PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: sfr:Sfri_1262 pseudouridylate synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; pseudouridine synthase complement(5062998..5063723) Cyclobacterium marinum DSM 745 11036384 YP_004776107.1 CDS Cycma_4172 NC_015914.1 5063725 5064939 R PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR018318:IPR004506; KEGG: zpr:ZPR_2921 tRNA methyl transferase; PFAM: tRNA methyl transferase-like; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; tRNA-specific 2-thiouridylase mnmA complement(5063725..5064939) Cyclobacterium marinum DSM 745 11036385 YP_004776108.1 CDS Cycma_4173 NC_015914.1 5065059 5066957 D PFAM: Shikimate kinase; 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase; 6-phosphogluconate dehydrogenase, decarboxylating; COGs: COG0362 6-phosphogluconate dehydrogenase; InterProIPR000623:IPR006115:IPR006114:IPR006001:IPR 006113; KEGG: chu:CHU_1404 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; Shikimate kinase; SPTR: 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; Carbohydrate kinase, thermoresistant glucokinase; 6-phosphogluconate dehydrogenase 5065059..5066957 Cyclobacterium marinum DSM 745 11036386 YP_004776109.1 CDS Cycma_4174 NC_015914.1 5066973 5067290 R InterPro IPR006311; hypothetical protein complement(5066973..5067290) Cyclobacterium marinum DSM 745 11036387 YP_004776110.1 CDS Cycma_4175 NC_015914.1 5067287 5068633 R COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: lic:LIC11509 cytoplasmic membrane protein; PFAM: PepSY-associated TM helix; SPTR: Membrane protein; PepSY-associated TM helix domain-containing protein complement(5067287..5068633) Cyclobacterium marinum DSM 745 11036388 YP_004776111.1 CDS Cycma_4176 NC_015914.1 5068652 5071108 R PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010105; KEGG: zpr:ZPR_0148 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(5068652..5071108) Cyclobacterium marinum DSM 745 11036389 YP_004776112.1 CDS Cycma_4177 NC_015914.1 5071494 5071955 D KEGG: chu:CHU_2806 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5071494..5071955 Cyclobacterium marinum DSM 745 11036390 YP_004776113.1 CDS Cycma_4178 NC_015914.1 5072030 5073391 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cpi:Cpin_0610 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 5072030..5073391 Cyclobacterium marinum DSM 745 11036391 YP_004776114.1 CDS Cycma_4179 NC_015914.1 5073431 5074480 D TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR000089:IPR006143; KEGG: shg:Sph21_1696 efflux transporter, RND family, MFP subunit; PFAM: Biotin/lipoyl attachment; SPTR: auxiliary transport protein, membrane fusion protein (MFP) family; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 5073431..5074480 Cyclobacterium marinum DSM 745 11036392 YP_004776115.1 CDS Cycma_4180 NC_015914.1 5074489 5077644 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: shg:Sph21_1695 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Efflux transporter, AcrB/AcrD/AcrF family, inner membrane component; acriflavin resistance protein 5074489..5077644 Cyclobacterium marinum DSM 745 11036393 YP_004776116.1 CDS Cycma_4181 NC_015914.1 5077737 5077976 D SPTR: uncharacterized protein; hypothetical protein 5077737..5077976 Cyclobacterium marinum DSM 745 11036394 YP_004776117.1 CDS Cycma_4182 NC_015914.1 5078204 5079874 R PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0440 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein complement(5078204..5079874) Cyclobacterium marinum DSM 745 11036395 YP_004776118.1 CDS Cycma_4183 NC_015914.1 5079899 5082919 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(5079899..5082919) Cyclobacterium marinum DSM 745 11036396 YP_004776119.1 CDS Cycma_4184 NC_015914.1 5083394 5084701 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01926 arylsulphatase A; PFAM: Sulfatase; SPTR: Arylsulphatase A; sulfatase complement(5083394..5084701) Cyclobacterium marinum DSM 745 11036397 YP_004776120.1 CDS Cycma_4185 NC_015914.1 5084745 5086931 R PFAM: Polysaccharide lyase 8, N terminal alpha-helical domain; Polysaccharide lyase 8, super-sandwich domain; Polysaccharide lyase 8, C-terminal beta-sandwich domain; InterPro IPR012970:IPR003159:IPR004103; KEGG: phe:Phep_0786 polysaccharide lyase 8; PFAM: Polysaccharide lyase 8, central domain; Polysaccharide lyase 8, N-terminal alpha-helical; Polysaccharide lyase 8, C-terminal; SPTR: uncharacterized protein; polysaccharide lyase 8 complement(5084745..5086931) Cyclobacterium marinum DSM 745 11036398 YP_004776121.1 CDS Cycma_4186 NC_015914.1 5087454 5088554 D PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: gfo:GFO_1581 membrane protein, UPF0118; PFAM: Uncharacterised protein family UPF0118; SPTR: Membrane protein, UPF0118; hypothetical protein 5087454..5088554 Cyclobacterium marinum DSM 745 11036399 YP_004776122.1 CDS Cycma_4187 NC_015914.1 5088646 5089131 D KEGG: chu:CHU_1802 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5088646..5089131 Cyclobacterium marinum DSM 745 11036400 YP_004776123.1 CDS Cycma_4188 NC_015914.1 5089070 5090695 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: YdjC family protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 5089070..5090695 Cyclobacterium marinum DSM 745 11036401 YP_004776124.1 CDS Cycma_4189 NC_015914.1 5091092 5091247 D hypothetical protein 5091092..5091247 Cyclobacterium marinum DSM 745 11036402 YP_004776125.1 CDS Cycma_4190 NC_015914.1 5091267 5091854 D PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: mtt:Ftrac_2610 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein TetR; TetR family transcriptional regulator 5091267..5091854 Cyclobacterium marinum DSM 745 11036403 YP_004776126.1 CDS Cycma_4191 NC_015914.1 5091851 5092984 D KEGG: mtt:Ftrac_2611 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5091851..5092984 Cyclobacterium marinum DSM 745 11036404 YP_004776127.1 CDS Cycma_4192 NC_015914.1 5092995 5093699 D PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2612 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 5092995..5093699 Cyclobacterium marinum DSM 745 11036405 YP_004776128.1 CDS Cycma_4193 NC_015914.1 5093696 5094853 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2613 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 5093696..5094853 Cyclobacterium marinum DSM 745 11036406 YP_004776129.1 CDS Cycma_4194 NC_015914.1 5094850 5096124 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2614 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 5094850..5096124 Cyclobacterium marinum DSM 745 11036407 YP_004776130.1 CDS Cycma_4195 NC_015914.1 5096142 5096903 D KEGG: mtt:Ftrac_2615 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5096142..5096903 Cyclobacterium marinum DSM 745 11036408 YP_004776131.1 CDS Cycma_4196 NC_015914.1 5096950 5098107 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2613 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: uncharacterized protein; hypothetical protein 5096950..5098107 Cyclobacterium marinum DSM 745 11036409 YP_004776132.1 CDS Cycma_4197 NC_015914.1 5098855 5100561 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: chu:CHU_0106 membrane-associated sensory histidine kinase-like ATPase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Membrane-associated sensory histidine kinase-like ATPase; integral membrane sensor signal transduction histidine kinase 5098855..5100561 Cyclobacterium marinum DSM 745 11036410 YP_004776133.1 CDS Cycma_4198 NC_015914.1 5100554 5101186 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: chu:CHU_0105 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 5100554..5101186 Cyclobacterium marinum DSM 745 11036411 YP_004776134.1 CDS Cycma_4199 NC_015914.1 5101327 5101626 D hypothetical protein 5101327..5101626 Cyclobacterium marinum DSM 745 11036412 YP_004776135.1 CDS Cycma_4200 NC_015914.1 5102297 5103109 D PFAM: Phospholipase A1; COGs: COG2829 Outer membrane phospholipase A; KEGG: pdi:BDI_0074 outer membrane phospholipase A; SPTR: Outer membrane phospholipase A; outer membrane phospholipase A 5102297..5103109 Cyclobacterium marinum DSM 745 11036413 YP_004776136.1 CDS Cycma_4201 NC_015914.1 5103372 5104841 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: rbi:RB2501_06065 outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Probable outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 5103372..5104841 Cyclobacterium marinum DSM 745 11036414 YP_004776137.1 CDS Cycma_4202 NC_015914.1 5104838 5106001 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: hoh:Hoch_4863 efflux transporter RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 5104838..5106001 Cyclobacterium marinum DSM 745 11036415 YP_004776138.1 CDS Cycma_4203 NC_015914.1 5106012 5109122 D PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_06075 multidrug resistance protein; PFAM: Acriflavin resistance protein; SPTR: Probable multidrug resistance protein; acriflavin resistance protein 5106012..5109122 Cyclobacterium marinum DSM 745 11036416 YP_004776139.1 CDS Cycma_4204 NC_015914.1 5109688 5109984 D hypothetical protein 5109688..5109984 Cyclobacterium marinum DSM 745 11036417 YP_004776140.1 CDS Cycma_4205 NC_015914.1 5110049 5111527 D PFAM: CotH protein; COGs: COG5337 Spore coat assembly protein; InterPro IPR014867; KEGG: cao:Celal_3981 spore coat protein coth; PFAM: Spore coat protein CotH; SPTR: Spore coat protein CotH; spore coat protein CotH 5110049..5111527 Cyclobacterium marinum DSM 745 11036418 YP_004776141.1 CDS Cycma_4206 NC_015914.1 5111965 5112639 R PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: cyh:Cyan8802_2036 multiple antibiotic resistance (MarC)-related protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: Multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; multiple antibiotic resistance (MarC)-like protein complement(5111965..5112639) Cyclobacterium marinum DSM 745 11036419 YP_004776142.1 CDS Cycma_4207 NC_015914.1 5112835 5114160 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cao:Celal_4027 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane lipoprotein; outer membrane efflux protein 5112835..5114160 Cyclobacterium marinum DSM 745 11036420 YP_004776143.1 CDS Cycma_4208 NC_015914.1 5114172 5115374 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cao:Celal_4026 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 5114172..5115374 Cyclobacterium marinum DSM 745 11036421 YP_004776144.1 CDS Cycma_4209 NC_015914.1 5115381 5116124 D PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cao:Celal_4025 phosphonate-transporting atpase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding component; ABC transporter 5115381..5116124 Cyclobacterium marinum DSM 745 11036422 YP_004776145.1 CDS Cycma_4210 NC_015914.1 5116127 5117347 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cao:Celal_4024 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, permease; hypothetical protein 5116127..5117347 Cyclobacterium marinum DSM 745 11036423 YP_004776146.1 CDS Cycma_4211 NC_015914.1 5117353 5118390 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: cao:Celal_4023 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Two-component sensor histidine kinase; signal transduction histidine kinase 5117353..5118390 Cyclobacterium marinum DSM 745 11036424 YP_004776147.1 CDS Cycma_4212 NC_015914.1 5118396 5119133 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cao:Celal_4022 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component response regulator; LytTR family two component transcriptional regulator 5118396..5119133 Cyclobacterium marinum DSM 745 11036425 YP_004776148.1 CDS Cycma_4213 NC_015914.1 5119860 5120990 R PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: mtt:Ftrac_0374 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; amidohydrolase complement(5119860..5120990) Cyclobacterium marinum DSM 745 11036426 YP_004776149.1 CDS Cycma_4214 NC_015914.1 5120994 5121545 R PFAM: Protein of unknown function (DUF2911); KEGG: mtt:Ftrac_0375 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5120994..5121545) Cyclobacterium marinum DSM 745 11036427 YP_004776150.1 CDS Cycma_4215 NC_015914.1 5122552 5123778 D PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; COGs: COG0523 GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: shg:Sph21_2587 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: Cobalamin (Vitamin B12) synthesis protein, CobW; cobalamin synthesis protein P47K 5122552..5123778 Cyclobacterium marinum DSM 745 11036428 YP_004776151.1 CDS Cycma_4216 NC_015914.1 5123863 5126184 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 5123863..5126184 Cyclobacterium marinum DSM 745 11036429 YP_004776152.1 CDS Cycma_4217 NC_015914.1 5126189 5127262 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5126189..5127262 Cyclobacterium marinum DSM 745 11036430 YP_004776153.1 CDS Cycma_4218 NC_015914.1 5127325 5132031 D PFAM: CobN/Magnesium Chelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: bvu:BVU_2194 protoporphyrin IX magnesium chelatase; PFAM: CobN/magnesium chelatase; SPTR: uncharacterized protein; CobN/magnesium chelatase 5127325..5132031 Cyclobacterium marinum DSM 745 11036431 YP_004776154.1 CDS Cycma_4219 NC_015914.1 5132033 5132725 D KEGG: osp:Odosp_1422 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5132033..5132725 Cyclobacterium marinum DSM 745 11036432 YP_004776155.1 CDS Cycma_4220 NC_015914.1 5132713 5133312 D PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; KEGG: bth:BT_0492 integral membrane protein; SPTR: Integral membrane protein; hypothetical protein 5132713..5133312 Cyclobacterium marinum DSM 745 11036433 YP_004776156.1 CDS Cycma_4221 NC_015914.1 5133293 5133625 D PFAM: Uncharacterized conserved protein (DUF2149); COGs: COG4744 conserved hypothetical protein; InterPro IPR018676; KEGG: bhl:Bache_3226 hypothetical protein; PFAM: Protein of unknown function DUF2149; SPTR: uncharacterized protein; hypothetical protein 5133293..5133625 Cyclobacterium marinum DSM 745 11036434 YP_004776157.1 CDS Cycma_4222 NC_015914.1 5133995 5136217 R PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterPro IPR018391:IPR019551:IPR002372:IPR003088; KEGG: dfe:Dfer_1611 glycerol dehydrogenase (acceptor); PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; Cytochrome c, class I; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Glycerol dehydrogenase (Acceptor); PQQ-dependent enzyme complement(5133995..5136217) Cyclobacterium marinum DSM 745 11036435 YP_004776158.1 CDS Cycma_4223 NC_015914.1 5136282 5138084 R PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: dfe:Dfer_3348 cytochrome c class I; SPTR: Cytochrome c class I; cytochrome c class I complement(5136282..5138084) Cyclobacterium marinum DSM 745 11036436 YP_004776159.1 CDS Cycma_4224 NC_015914.1 5138629 5139600 D PFAM: Domain of unknown function (DUF227); InterPro IPR015897:IPR004119; KEGG: mtt:Ftrac_0370 hypothetical protein; PFAM: Protein of unknown function DUF227; SMART: CHK kinase-like; SPTR: uncharacterized protein; hypothetical protein 5138629..5139600 Cyclobacterium marinum DSM 745 11036437 YP_004776160.1 CDS Cycma_4225 NC_015914.1 5139601 5140476 D PFAM: Inositol monophosphatase; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760; KEGG: mtt:Ftrac_0371 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol monophosphatase; inositol monophosphatase 5139601..5140476 Cyclobacterium marinum DSM 745 11036438 YP_004776161.1 CDS Cycma_4226 NC_015914.1 5140673 5141857 R KEGG: dat:HRM2_21180 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5140673..5141857) Cyclobacterium marinum DSM 745 11036439 YP_004776162.1 CDS Cycma_4227 NC_015914.1 5141896 5142873 R KEGG: dat:HRM2_21190 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5141896..5142873) Cyclobacterium marinum DSM 745 11036440 YP_004776163.1 CDS Cycma_4228 NC_015914.1 5142879 5143550 R KEGG: dat:HRM2_21160 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5142879..5143550) Cyclobacterium marinum DSM 745 11036441 YP_004776164.1 CDS Cycma_4229 NC_015914.1 5143562 5144815 R KEGG: fbc:FB2170_10111 hypothetical protein; SPTR: secreted protein; hypothetical protein complement(5143562..5144815) Cyclobacterium marinum DSM 745 11036442 YP_004776165.1 CDS Cycma_4230 NC_015914.1 5145306 5146877 D PFAM: Sel1 repeat; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: oaa:100084694 hypothetical protein LOC100084694; PFAM: Sel1-like; SMART: Sel1-like; SPTR: TPR repeat protein; Sel1 domain-containing protein repeat-containing protein 5145306..5146877 Cyclobacterium marinum DSM 745 11036443 YP_004776166.1 CDS Cycma_4231 NC_015914.1 5146922 5148160 D PFAM: Prolyl oligopeptidase; COGs: COG3458 Acetyl esterase (deacetylase); KEGG: psn:Pedsa_2279 acetyl xylan esterase; SPTR: uncharacterized protein; acetyl xylan esterase 5146922..5148160 Cyclobacterium marinum DSM 745 11036444 YP_004776167.1 CDS Cycma_4232 NC_015914.1 5148413 5149489 R PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: vfi:VF_0968 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase complement(5148413..5149489) Cyclobacterium marinum DSM 745 11036445 YP_004776168.1 CDS Cycma_4233 NC_015914.1 5149806 5150918 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: bco:Bcell_3957 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: uncharacterized protein; beta-lactamase 5149806..5150918 Cyclobacterium marinum DSM 745 11036446 YP_004776169.1 CDS Cycma_4234 NC_015914.1 5150967 5151680 D PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: chu:CHU_2541 protease; PFAM: Abortive infection protein; SPTR: Protease; abortive infection protein 5150967..5151680 Cyclobacterium marinum DSM 745 11036447 YP_004776170.1 CDS Cycma_4235 NC_015914.1 5151850 5152500 D KEGG: dfe:Dfer_0778 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5151850..5152500 Cyclobacterium marinum DSM 745 11036448 YP_004776171.1 CDS Cycma_4236 NC_015914.1 5152556 5152774 D hypothetical protein 5152556..5152774 Cyclobacterium marinum DSM 745 11036449 YP_004776172.1 CDS Cycma_4237 NC_015914.1 5153033 5153230 D hypothetical protein 5153033..5153230 Cyclobacterium marinum DSM 745 11036450 YP_004776173.1 CDS Cycma_4238 NC_015914.1 5153935 5154093 D hypothetical protein 5153935..5154093 Cyclobacterium marinum DSM 745 11036451 YP_004776174.1 CDS Cycma_4239 NC_015914.1 5154137 5154259 D hypothetical protein 5154137..5154259 Cyclobacterium marinum DSM 745 11036452 YP_004776175.1 CDS Cycma_4241 NC_015914.1 5154968 5155147 D hypothetical protein 5154968..5155147 Cyclobacterium marinum DSM 745 11036454 YP_004776176.1 CDS Cycma_4242 NC_015914.1 5155128 5155547 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: mca:MCA1893 type I restriction-modification system, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Type I site-specific deoxyribonuclease, HsdR family; Restriction endonuclease, type I, EcoRI, R subunit/type III 5155128..5155547 Cyclobacterium marinum DSM 745 11036455 YP_004776177.1 CDS Cycma_4243 NC_015914.1 5155966 5157276 D PFAM: PhoD-like phosphatase; KEGG: pcu:pc1536 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5155966..5157276 Cyclobacterium marinum DSM 745 11036537 YP_004776178.1 CDS Cycma_4244 NC_015914.1 5158259 5159674 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: cpi:Cpin_7299 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 5158259..5159674 Cyclobacterium marinum DSM 745 11036538 YP_004776179.1 CDS Cycma_4245 NC_015914.1 5159706 5160365 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: phe:Phep_0588 response regulator receiver; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator; LytTR family two component transcriptional regulator 5159706..5160365 Cyclobacterium marinum DSM 745 11036539 YP_004776180.1 CDS Cycma_4246 NC_015914.1 5160454 5160744 D hypothetical protein 5160454..5160744 Cyclobacterium marinum DSM 745 11036540 YP_004776181.1 CDS Cycma_4247 NC_015914.1 5161075 5164290 R PFAM: Cytochrome c; TIGRFAM: membrane-bound dehydrogenase domain; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428; KEGG: dfe:Dfer_4984 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; membrane-bound dehydrogenase domain-containing protein complement(5161075..5164290) Cyclobacterium marinum DSM 745 11036541 YP_004776182.1 CDS Cycma_4248 NC_015914.1 5164556 5166016 D PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: zpr:ZPR_4168 sodium:sulfate symporter; PFAM: Sodium/sulphate symporter; SPTR: Anion transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter 5164556..5166016 Cyclobacterium marinum DSM 745 11036542 YP_004776183.1 CDS Cycma_4249 NC_015914.1 5166466 5167677 R InterPro IPR001440; KEGG: mtt:Ftrac_0498 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: uncharacterized protein; hypothetical protein complement(5166466..5167677) Cyclobacterium marinum DSM 745 11036543 YP_004776184.1 CDS Cycma_4250 NC_015914.1 5167711 5170263 R PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR006691:IPR005743; KEGG: mtt:Ftrac_0499 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, subunit A; DNA gyrase subunit A complement(5167711..5170263) Cyclobacterium marinum DSM 745 11036544 YP_004776185.1 CDS Cycma_4251 NC_015914.1 5170429 5171427 R KEGG: mtt:Ftrac_0500 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5170429..5171427) Cyclobacterium marinum DSM 745 11036545 YP_004776186.1 CDS Cycma_4252 NC_015914.1 5171523 5172035 R KEGG: zpr:ZPR_1634 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5171523..5172035) Cyclobacterium marinum DSM 745 11036546 YP_004776187.1 CDS Cycma_4253 NC_015914.1 5172155 5172808 R PFAM: Ribulose-phosphate 3 epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: mtt:Ftrac_0486 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(5172155..5172808) Cyclobacterium marinum DSM 745 11036547 YP_004776188.1 CDS Cycma_4254 NC_015914.1 5172878 5174503 R PFAM: Subtilase; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sli:Slin_1650 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Exported serine protease, subtilase; peptidase S8 and S53 subtilisin kexin sedolisin complement(5172878..5174503) Cyclobacterium marinum DSM 745 11036548 YP_004776189.1 CDS Cycma_4255 NC_015914.1 5174490 5175179 R KEGG: sli:Slin_1651 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5174490..5175179) Cyclobacterium marinum DSM 745 11036549 YP_004776190.1 CDS Cycma_4256 NC_015914.1 5175232 5175861 D COGs: COG0135 Phosphoribosylanthranilate isomerase; KEGG: mtt:Ftrac_0467 hypothetical protein; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; hypothetical protein 5175232..5175861 Cyclobacterium marinum DSM 745 11036550 YP_004776191.1 CDS Cycma_4257 NC_015914.1 5175858 5176523 R PFAM: methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; InterPro IPR003358; KEGG: lby:Lbys_0927 tRNA (guanine-n(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(5175858..5176523) Cyclobacterium marinum DSM 745 11036551 YP_004776192.1 CDS Cycma_4258 NC_015914.1 5176526 5177833 R PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: psn:Pedsa_1924 FolC bifunctional protein; PFAM: Mur ligase, central; SPTR: Tetrahydrofolate synthase; TIGRFAM: Folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(5176526..5177833) Cyclobacterium marinum DSM 745 11036552 YP_004776193.1 CDS Cycma_4259 NC_015914.1 5177843 5178796 R KEGG: mtt:Ftrac_0329 hypothetical protein; SPTR: TonB exported protein; hypothetical protein complement(5177843..5178796) Cyclobacterium marinum DSM 745 11036553 YP_004776194.1 CDS Cycma_4260 NC_015914.1 5178800 5179192 R PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: mtt:Ftrac_0328 outer membrane transport energization protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: ExbD/TolR family protein; biopolymer transport protein ExbD/TolR complement(5178800..5179192) Cyclobacterium marinum DSM 745 11036554 YP_004776195.1 CDS Cycma_4261 NC_015914.1 5179194 5179895 R PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: mtt:Ftrac_0327 outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel complement(5179194..5179895) Cyclobacterium marinum DSM 745 11036555 YP_004776196.1 CDS Cycma_4262 NC_015914.1 5179897 5180553 R PFAM: Sporulation related domain; InterPro IPR007730; KEGG: mtt:Ftrac_0326 sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Sporulation domain-containing protein; sporulation domain-containing protein complement(5179897..5180553) Cyclobacterium marinum DSM 745 11036556 YP_004776197.1 CDS Cycma_4263 NC_015914.1 5180595 5180771 D hypothetical protein 5180595..5180771 Cyclobacterium marinum DSM 745 11036557 YP_004776198.1 CDS Cycma_4264 NC_015914.1 5180691 5182367 R KEGG: dfe:Dfer_1051 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5180691..5182367) Cyclobacterium marinum DSM 745 11036558 YP_004776199.1 CDS Cycma_4265 NC_015914.1 5182367 5185387 R PFAM: Tetratricopeptide repeat; TIGRFAM: FimV C-terminal domain; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_0324 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: ATP synthase F1, delta subunit; hypothetical protein complement(5182367..5185387) Cyclobacterium marinum DSM 745 11036559 YP_004776200.1 CDS Cycma_4266 NC_015914.1 5185384 5186409 R PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR005790; KEGG: chu:CHU_1537 hypothetical protein; PFAM: DNA polymerase III, delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta complement(5185384..5186409) Cyclobacterium marinum DSM 745 11036560 YP_004776201.1 CDS Cycma_4267 NC_015914.1 5186531 5187238 D PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_0204 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein; hypothetical protein 5186531..5187238 Cyclobacterium marinum DSM 745 11036561 YP_004776202.1 CDS Cycma_4268 NC_015914.1 5187225 5188061 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_0145 UspA domain-containing protein; PFAM: UspA; SPTR: universal stress protein; UspA domain-containing protein complement(5187225..5188061) Cyclobacterium marinum DSM 745 11036562 YP_004776203.1 CDS Cycma_4269 NC_015914.1 5188083 5189009 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140; KEGG: gfo:GFO_0312 D-isomer-specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(5188083..5189009) Cyclobacterium marinum DSM 745 11036563 YP_004776204.1 CDS Cycma_4270 NC_015914.1 5189245 5190090 D PFAM: Protein of unknown function (DUF2911); KEGG: zpr:ZPR_2316 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5189245..5190090 Cyclobacterium marinum DSM 745 11036564 YP_004776205.1 CDS Cycma_4271 NC_015914.1 5190529 5192259 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR019900; KEGG: mtt:Ftrac_0141 sss sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: Transporter, solute:sodium symporter (SSS) family; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(5190529..5192259) Cyclobacterium marinum DSM 745 11036565 YP_004776206.1 CDS Cycma_4272 NC_015914.1 5192356 5194848 R PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: mtt:Ftrac_0206 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Lipoprotein; LmbE family protein complement(5192356..5194848) Cyclobacterium marinum DSM 745 11036566 YP_004776207.1 CDS Cycma_4273 NC_015914.1 5195116 5196060 D PFAM: Phytanoyl-CoA dioxygenase (PhyH); KEGG: sli:Slin_1668 phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 5195116..5196060 Cyclobacterium marinum DSM 745 11036567 YP_004776208.1 CDS Cycma_4274 NC_015914.1 5196073 5198250 R PFAM: Domain of unknown function (DUF1083); KEGG: sli:Slin_2536 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5196073..5198250) Cyclobacterium marinum DSM 745 11036568 YP_004776209.1 CDS Cycma_4275 NC_015914.1 5198427 5199620 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_04045 hypothetical protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: uncharacterized protein; oxidoreductase domain-containing protein complement(5198427..5199620) Cyclobacterium marinum DSM 745 11036569 YP_004776210.1 CDS Cycma_4276 NC_015914.1 5199853 5200533 D KEGG: mtt:Ftrac_0878 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5199853..5200533 Cyclobacterium marinum DSM 745 11036570 YP_004776211.1 CDS Cycma_4277 NC_015914.1 5200648 5201847 D PFAM: FAD dependent oxidoreductase; COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: lby:Lbys_3394 fad dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD-dependent oxidoreductase; FAD dependent oxidoreductase 5200648..5201847 Cyclobacterium marinum DSM 745 11036571 YP_004776212.1 CDS Cycma_4278 NC_015914.1 5202302 5202652 R PFAM: Hpt domain; SPTR: uncharacterized protein; hypothetical protein complement(5202302..5202652) Cyclobacterium marinum DSM 745 11036572 YP_004776213.1 CDS Cycma_4279 NC_015914.1 5202807 5204030 R PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: mtt:Ftrac_1079 hi0933 family protein; PFAM: HI0933-like protein; SPTR: Pyridine nucleotide-disulfide oxidoreductase; TIGRFAM: HI0933-like protein; hypothetical protein complement(5202807..5204030) Cyclobacterium marinum DSM 745 11036573 YP_004776214.1 CDS Cycma_4280 NC_015914.1 5204051 5205583 R PFAM: Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR008571; KEGG: chu:CHU_1283 hypothetical protein; PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, SPTR: uncharacterized protein; hypothetical protein complement(5204051..5205583) Cyclobacterium marinum DSM 745 11036574 YP_004776215.1 CDS Cycma_4281 NC_015914.1 5205795 5206202 R KEGG: xau:Xaut_3311 molybdenum cofactor biosynthesis protein; SPTR: uncharacterized protein; molybdenum cofactor biosynthesis protein complement(5205795..5206202) Cyclobacterium marinum DSM 745 11036575 YP_004776216.1 CDS Cycma_4282 NC_015914.1 5206235 5206687 R KEGG: chu:CHU_2630 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5206235..5206687) Cyclobacterium marinum DSM 745 11036576 YP_004776217.1 CDS Cycma_4283 NC_015914.1 5206761 5206865 R hypothetical protein complement(5206761..5206865) Cyclobacterium marinum DSM 745 11036577 YP_004776218.1 CDS Cycma_4284 NC_015914.1 5207213 5207374 D hypothetical protein 5207213..5207374 Cyclobacterium marinum DSM 745 11036578 YP_004776219.1 CDS Cycma_4285 NC_015914.1 5207377 5208126 D KEGG: mtt:Ftrac_0682 DnaJ-like chaperone; heat shock protein; SPTR: uncharacterized protein; DnaJ-like chaperone 5207377..5208126 Cyclobacterium marinum DSM 745 11036579 YP_004776220.1 CDS Cycma_4286 NC_015914.1 5209247 5209849 R PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440:IPR013105; KEGG: mtt:Ftrac_0686 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(5209247..5209849) Cyclobacterium marinum DSM 745 11036580 YP_004776221.1 CDS Cycma_4287 NC_015914.1 5209864 5210679 R TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451; KEGG: mtt:Ftrac_0688 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; SPTR: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(5209864..5210679) Cyclobacterium marinum DSM 745 11036581 YP_004776222.1 CDS Cycma_4288 NC_015914.1 5210716 5211843 D PFAM: Glycosyl transferases group 1; KEGG: mtt:Ftrac_0689 glycosyl transferase group 1; SPTR: Lps biosynthesis rfbu related protein; group 1 glycosyl transferase 5210716..5211843 Cyclobacterium marinum DSM 745 11036582 YP_004776223.1 CDS Cycma_4289 NC_015914.1 5212095 5212766 D PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167; KEGG: mtt:Ftrac_0690 iron (metal) dependent repressor, dtxr family; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor; SPTR: Iron repressor protein; DtxR family iron (metal) dependent repressor 5212095..5212766 Cyclobacterium marinum DSM 745 11036583 YP_004776224.1 CDS Cycma_4290 NC_015914.1 5212926 5213378 D PFAM: Protein of unknown function, DUF255; COGs: COG2143 Thioredoxin-related protein; InterPro IPR004879; KEGG: mtt:Ftrac_0696 thioredoxin-related protein-like protein; SPTR: Secreted protein containing DUF255; thioredoxin-like protein 5212926..5213378 Cyclobacterium marinum DSM 745 11036584 YP_004776225.1 CDS Cycma_4291 NC_015914.1 5213378 5214760 D PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: mtt:Ftrac_1499 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase trmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; tRNA modification GTPase mnmE 5213378..5214760 Cyclobacterium marinum DSM 745 11036585 YP_004776226.1 CDS Cycma_4292 NC_015914.1 5215003 5215356 D TIGRFAM: DNA binding domain, excisionase; InterPro IPR010093; KEGG: cly:Celly_3207 DNA-binding domain-containing protein, excisionase; SPTR: DNA binding domain protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; excisionase 5215003..5215356 Cyclobacterium marinum DSM 745 11036586 YP_004776227.1 CDS Cycma_4293 NC_015914.1 5215353 5216447 D PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cly:Celly_3208 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase; integrase 5215353..5216447 Cyclobacterium marinum DSM 745 11036587 YP_004776228.1 CDS Cycma_4294 NC_015914.1 5216444 5217460 D hypothetical protein 5216444..5217460 Cyclobacterium marinum DSM 745 11036588 YP_004776229.1 CDS Cycma_4295 NC_015914.1 5217692 5217991 D TIGRFAM: DNA binding domain, excisionase; InterPro IPR010093; KEGG: cly:Celly_3210 DNA-binding domain-containing protein, excisionase; SPTR: DNA binding domain protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding; excisionase 5217692..5217991 Cyclobacterium marinum DSM 745 11036589 YP_004776230.1 CDS Cycma_4296 NC_015914.1 5217988 5218284 D KEGG: cly:Celly_3211 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5217988..5218284 Cyclobacterium marinum DSM 745 11036590 YP_004776231.1 CDS Cycma_4297 NC_015914.1 5218271 5219191 D PFAM: VirE N-terminal domain; InterPro IPR014907; KEGG: cly:Celly_3212 VirE protein; PFAM: VirE N-terminal; SPTR: VirE protein; VirE protein 5218271..5219191 Cyclobacterium marinum DSM 745 11036591 YP_004776232.1 CDS Cycma_4298 NC_015914.1 5219195 5221012 D PFAM: Primase C terminal 2 (PriCT-2); InterPro IPR014819; KEGG: cly:Celly_3213 hypothetical protein; PFAM: Primase, C-terminal 2; SPTR: uncharacterized protein; primase 2 5219195..5221012 Cyclobacterium marinum DSM 745 11036592 YP_004776233.1 CDS Cycma_4299 NC_015914.1 5221132 5221422 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fps:FP0857 DNA binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: uncharacterized protein; manually curated; helix-turn-helix domain-containing protein 5221132..5221422 Cyclobacterium marinum DSM 745 11036593 YP_004776234.1 CDS Cycma_4300 NC_015914.1 5221445 5223544 D PFAM: Piwi domain; InterPro IPR003165; KEGG: cly:Celly_3216 stem cell self-renewal protein Piwi; PFAM: Stem cell self-renewal protein Piwi; SPTR: Stem cell self-renewal protein Piwi; stem cell self-renewal protein Piwi 5221445..5223544 Cyclobacterium marinum DSM 745 11036594 YP_004776235.1 CDS Cycma_4301 NC_015914.1 5223544 5223954 D PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: cat:CA2559_11678 transcription regulator; SPTR: uncharacterized protein; transcriptional regulator 5223544..5223954 Cyclobacterium marinum DSM 745 11036595 YP_004776236.1 CDS Cycma_4302 NC_015914.1 5224000 5224329 D manually curated; hypothetical protein 5224000..5224329 Cyclobacterium marinum DSM 745 11036596 YP_004776237.1 CDS Cycma_4303 NC_015914.1 5224517 5228929 D PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: mtt:Ftrac_1216 heavy metal efflux pump, czca family; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 5224517..5228929 Cyclobacterium marinum DSM 745 11036597 YP_004776238.1 CDS Cycma_4304 NC_015914.1 5228948 5230210 D TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_1187 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 5228948..5230210 Cyclobacterium marinum DSM 745 11036598 YP_004776239.1 CDS Cycma_4305 NC_015914.1 5230221 5231012 D PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_2056 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein; manually curated; cation efflux protein 5230221..5231012 Cyclobacterium marinum DSM 745 11036599 YP_004776240.1 CDS Cycma_4306 NC_015914.1 5231009 5231902 D PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_1213 cation diffusion facilitator family transporter; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter 5231009..5231902 Cyclobacterium marinum DSM 745 11036600 YP_004776241.1 CDS Cycma_4307 NC_015914.1 5232119 5232694 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2060 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: regulatory protein; AraC family transcriptional regulator 5232119..5232694 Cyclobacterium marinum DSM 745 11036601 YP_004776242.1 CDS Cycma_4308 NC_015914.1 5232780 5233517 D PFAM: Heavy-metal-associated domain; KEGG: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 5232780..5233517 Cyclobacterium marinum DSM 745 11036602 YP_004776243.1 CDS Cycma_4309 NC_015914.1 5233574 5233993 D KEGG: mtt:Ftrac_2114 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 5233574..5233993 Cyclobacterium marinum DSM 745 11036603 YP_004776244.1 CDS Cycma_4310 NC_015914.1 5234098 5237922 D PFAM: AcrB/AcrD/AcrF family; COGs: COG3696 silver efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_2113 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; acriflavin resistance protein 5234098..5237922 Cyclobacterium marinum DSM 745 11036604 YP_004776245.1 CDS Cycma_4311 NC_015914.1 5237919 5239151 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_2112 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 5237919..5239151 Cyclobacterium marinum DSM 745 11036605 YP_004776246.1 CDS Cycma_4312 NC_015914.1 5239154 5241211 D PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: mtt:Ftrac_3540 copper-translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; copper-translocating P-type ATPase 5239154..5241211 Cyclobacterium marinum DSM 745 11036606 YP_004776247.1 CDS Cycma_4313 NC_015914.1 5241213 5242991 D PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 5241213..5242991 Cyclobacterium marinum DSM 745 11036607 YP_004776248.1 CDS Cycma_4314 NC_015914.1 5243131 5243748 D PFAM: Protein of unknown function (DUF3347); KEGG: rbi:RB2501_04700 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5243131..5243748 Cyclobacterium marinum DSM 745 11036608 YP_004776249.1 CDS Cycma_4315 NC_015914.1 5243745 5244206 D KEGG: rbi:RB2501_04695 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5243745..5244206 Cyclobacterium marinum DSM 745 11036609 YP_004776250.1 CDS Cycma_4316 NC_015914.1 5244230 5245027 D PFAM: Cation efflux family; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: ran:Riean_1807 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein; cation efflux protein 5244230..5245027 Cyclobacterium marinum DSM 745 11036610 YP_004776251.1 CDS Cycma_4317 NC_015914.1 5246053 5246421 D PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mtt:Ftrac_2122 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR; regulatory protein ArsR 5246053..5246421 Cyclobacterium marinum DSM 745 11036611 YP_004776252.1 CDS Cycma_4318 NC_015914.1 5246418 5247026 D PFAM: Heavy-metal-associated domain; MerT mercuric transport protein; COGs: COG2608 Copper chaperone; InterPro IPR003457:IPR006121; KEGG: Heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: MerT-like protein containing heavy metal transport/detoxification domain; heavy metal transport/detoxification protein 5246418..5247026 Cyclobacterium marinum DSM 745 11036612 YP_004776253.1 CDS Cycma_4319 NC_015914.1 5247023 5247241 D KEGG: mtt:Ftrac_2119 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5247023..5247241 Cyclobacterium marinum DSM 745 11036613 YP_004776254.1 CDS Cycma_4320 NC_015914.1 5247229 5247936 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5247229..5247936 Cyclobacterium marinum DSM 745 11036614 YP_004776255.1 CDS Cycma_4321 NC_015914.1 5248115 5248756 D KEGG: cat:CA2559_00400 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5248115..5248756 Cyclobacterium marinum DSM 745 11036615 YP_004776256.1 CDS Cycma_4322 NC_015914.1 5249385 5249909 R PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: hoh:Hoch_3526 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; OsmC family protein complement(5249385..5249909) Cyclobacterium marinum DSM 745 11036616 YP_004776257.1 CDS Cycma_4323 NC_015914.1 5250879 5251169 D PFAM: Plasmid maintenance system killer protein; COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: hap:HAPS_0388 plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid maintenance system killer; SPTR: Plasmid maintenance system killer; manually curated; plasmid maintenance system killer protein 5250879..5251169 Cyclobacterium marinum DSM 745 11036617 YP_004776258.1 CDS Cycma_4324 NC_015914.1 5251182 5251481 D PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR013430:IPR001387; KEGG: net:Neut_2616 XRE family plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; SPTR: Plasmid maintenance system antidote protein, XRE family; TIGRFAM: Addiction module antidote protein, HigA; XRE family transcriptional regulator 5251182..5251481 Cyclobacterium marinum DSM 745 11036699 YP_004776259.1 CDS Cycma_4325 NC_015914.1 5251660 5251905 D PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: cat:CA2559_06880 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5251660..5251905 Cyclobacterium marinum DSM 745 11036700 YP_004776260.1 CDS Cycma_4326 NC_015914.1 5251902 5252174 D PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: mtt:Ftrac_3443 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system; plasmid stabilization system 5251902..5252174 Cyclobacterium marinum DSM 745 11036701 YP_004776261.1 CDS Cycma_4327 NC_015914.1 5252248 5252499 D PFAM: Phd_YefM; KEGG: pph:Ppha_1444 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5252248..5252499 Cyclobacterium marinum DSM 745 11036702 YP_004776262.1 CDS Cycma_4329 NC_015914.1 5253172 5254308 R PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: cgt:cgR_1608 hypothetical protein; PFAM: BNR repeat; SPTR: uncharacterized protein; glycosyl hydrolase family protein complement(5253172..5254308) Cyclobacterium marinum DSM 745 11036704 YP_004776263.1 CDS Cycma_4330 NC_015914.1 5254362 5256023 R KEGG: rba:RB9146 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5254362..5256023) Cyclobacterium marinum DSM 745 11036705 YP_004776264.1 CDS Cycma_4331 NC_015914.1 5256533 5257429 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR006124; KEGG: fbc:FB2170_02115 hypothetical protein; PFAM: Metalloenzyme; SPTR: Phosphodiesterase/nucleotide pyrophosphatase; metalloenzyme domain-containing protein complement(5256533..5257429) Cyclobacterium marinum DSM 745 11036706 YP_004776265.1 CDS Cycma_4332 NC_015914.1 5258035 5259192 D KEGG: phe:Phep_2377 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5258035..5259192 Cyclobacterium marinum DSM 745 11036707 YP_004776266.1 CDS Cycma_4333 NC_015914.1 5260800 5261978 R KEGG: lby:Lbys_1886 periplasmic protein; SPTR: periplasmic protein; hypothetical protein complement(5260800..5261978) Cyclobacterium marinum DSM 745 11036708 YP_004776267.1 CDS Cycma_4334 NC_015914.1 5262159 5262353 R hypothetical protein complement(5262159..5262353) Cyclobacterium marinum DSM 745 11036709 YP_004776268.1 CDS Cycma_4335 NC_015914.1 5262639 5264111 R KEGG: bfs:BF3025 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5262639..5264111) Cyclobacterium marinum DSM 745 11036710 YP_004776269.1 CDS Cycma_4336 NC_015914.1 5264144 5267620 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: bfr:BF3184 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug complement(5264144..5267620) Cyclobacterium marinum DSM 745 11036711 YP_004776270.1 CDS Cycma_4337 NC_015914.1 5267738 5268739 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_2028 anti-sigma factor; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR complement(5267738..5268739) Cyclobacterium marinum DSM 745 11036712 YP_004776271.1 CDS Cycma_4338 NC_015914.1 5269007 5269630 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: bvu:BVU_0109 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(5269007..5269630) Cyclobacterium marinum DSM 745 11036713 YP_004776272.1 CDS Cycma_4339 NC_015914.1 5270206 5270688 D PFAM: Protein of unknown function (DUF2938); KEGG: fjo:Fjoh_2644 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5270206..5270688 Cyclobacterium marinum DSM 745 11036714 YP_004776273.1 CDS Cycma_4340 NC_015914.1 5270831 5271169 D hypothetical protein 5270831..5271169 Cyclobacterium marinum DSM 745 11036715 YP_004776274.1 CDS Cycma_4341 NC_015914.1 5271357 5272031 D PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: cts:Ctha_0665 phosphoesterase PA-phosphatase-like protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase 5271357..5272031 Cyclobacterium marinum DSM 745 11036716 YP_004776275.1 CDS Cycma_4342 NC_015914.1 5272155 5273774 R COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: pmx:PERMA_0510 dolichyl-phosphate-mannose-protein mannosyltransferase; PFAM: Glycosyl transferase, family 39; SPTR: dolichyl-phosphate-mannose-protein mannosyltransferase; glycosyl transferase family protein complement(5272155..5273774) Cyclobacterium marinum DSM 745 11036717 YP_004776276.1 CDS Cycma_4343 NC_015914.1 5274098 5274889 D PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013105:IPR001440; KEGG: pmf:P9303_28721 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: uncharacterized protein; hypothetical protein 5274098..5274889 Cyclobacterium marinum DSM 745 11036718 YP_004776277.1 CDS Cycma_4344 NC_015914.1 5275490 5275684 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: gfo:GFO_1579 cold shock-like protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock-like protein; cold-shock DNA-binding domain-containing protein 5275490..5275684 Cyclobacterium marinum DSM 745 11036719 YP_004776278.1 CDS Cycma_4345 NC_015914.1 5275721 5275915 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: dfe:Dfer_4688 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 5275721..5275915 Cyclobacterium marinum DSM 745 11036720 YP_004776279.1 CDS Cycma_4346 NC_015914.1 5276207 5276605 D COGs: COG3607 lactoylglutathione lyase; InterPro IPR004360; KEGG: pjd:Pjdr2_0655 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: uncharacterized protein; glyoxalase/bleomycin resistance protein/dioxygenase 5276207..5276605 Cyclobacterium marinum DSM 745 11036721 YP_004776280.1 CDS Cycma_4347 NC_015914.1 5276633 5277010 D KEGG: zpr:ZPR_1398 hypothetical protein; SPTR: DNA-binding protein; hypothetical protein 5276633..5277010 Cyclobacterium marinum DSM 745 11036722 YP_004776281.1 CDS Cycma_4348 NC_015914.1 5277259 5278005 D PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3744 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family; family 2 glycosyl transferase 5277259..5278005 Cyclobacterium marinum DSM 745 11036723 YP_004776282.1 CDS Cycma_4349 NC_015914.1 5277992 5279212 R PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_3356 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Membrane protein; hypothetical protein complement(5277992..5279212) Cyclobacterium marinum DSM 745 11036724 YP_004776283.1 CDS Cycma_4350 NC_015914.1 5279251 5280471 D PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: pdi:BDI_3709 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: uncharacterized protein; hypothetical protein 5279251..5280471 Cyclobacterium marinum DSM 745 11036725 YP_004776284.1 CDS Cycma_4351 NC_015914.1 5280476 5281408 D PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: dfe:Dfer_4814 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 5280476..5281408 Cyclobacterium marinum DSM 745 11036726 YP_004776285.1 CDS Cycma_4352 NC_015914.1 5281596 5282144 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: dfe:Dfer_2934 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 5281596..5282144 Cyclobacterium marinum DSM 745 11036727 YP_004776286.1 CDS Cycma_4353 NC_015914.1 5282177 5282548 D SPTR: uncharacterized protein; hypothetical protein 5282177..5282548 Cyclobacterium marinum DSM 745 11036728 YP_004776287.1 CDS Cycma_4354 NC_015914.1 5282550 5283005 D KEGG: cat:CA2559_10293 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5282550..5283005 Cyclobacterium marinum DSM 745 11036729 YP_004776288.1 CDS Cycma_4355 NC_015914.1 5283303 5284631 D PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753:IPR020579; KEGG: mtt:Ftrac_3218 exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; SPTR: Exodeoxyribonuclease VII, large subunit; TIGRFAM: Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 5283303..5284631 Cyclobacterium marinum DSM 745 11036730 YP_004776289.1 CDS Cycma_4356 NC_015914.1 5284612 5284812 D PFAM: Exonuclease VII small subunit; InterPro IPR003761; KEGG: exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII, small subunit; SPTR: Exodeoxyribonuclease VII, small subunit; exonuclease VII small subunit 5284612..5284812 Cyclobacterium marinum DSM 745 11036731 YP_004776290.1 CDS Cycma_4357 NC_015914.1 5284932 5287409 D PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: DNA ligase; InterProIPR013840:IPR001357:IPR001679:IPR013839:IPR 004150:IPR004149; KEGG: zpr:ZPR_3580 DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; SMART: NAD-dependent DNA ligase, N-terminal; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; DNA ligase 5284932..5287409 Cyclobacterium marinum DSM 745 11036732 YP_004776291.1 CDS Cycma_4358 NC_015914.1 5287416 5287910 D hypothetical protein 5287416..5287910 Cyclobacterium marinum DSM 745 11036733 YP_004776292.1 CDS Cycma_4359 NC_015914.1 5287912 5288805 D PFAM: Dihydrodipicolinate synthetase; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR005263:IPR002220; KEGG: mtt:Ftrac_0816 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; dihydrodipicolinate synthase 5287912..5288805 Cyclobacterium marinum DSM 745 11036734 YP_004776293.1 CDS Cycma_4360 NC_015914.1 5288866 5289039 R PFAM: Histone H1-like protein Hc1; KEGG: chu:CHU_1311 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5288866..5289039) Cyclobacterium marinum DSM 745 11036735 YP_004776294.1 CDS Cycma_4361 NC_015914.1 5289136 5290386 R PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: mtt:Ftrac_1580 glycine C-acetyltransferase; PFAM: Aminotransferase, class I/II; SPTR: 2-amino-3-ketobutyrate CoA ligase; class I and II aminotransferase complement(5289136..5290386) Cyclobacterium marinum DSM 745 11036736 YP_004776295.1 CDS Cycma_4362 NC_015914.1 5290457 5290612 R hypothetical protein complement(5290457..5290612) Cyclobacterium marinum DSM 745 11036737 YP_004776296.1 CDS Cycma_4363 NC_015914.1 5290695 5291282 D PFAM: Maf-like protein; TIGRFAM: MAF protein; COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: osp:Odosp_0698 septum formation protein Maf; PFAM: Maf-like protein; SPTR: Maf-like protein HMPREF0648_0781; TIGRFAM: Maf-like protein; manually curated; septum formation protein Maf 5290695..5291282 Cyclobacterium marinum DSM 745 11036738 YP_004776297.1 CDS Cycma_4364 NC_015914.1 5291419 5291997 R KEGG: sli:Slin_6323 lipoprotein; SPTR: uncharacterized protein; lipoprotein complement(5291419..5291997) Cyclobacterium marinum DSM 745 11036739 YP_004776298.1 CDS Cycma_4365 NC_015914.1 5292137 5292874 D PFAM: LamB/YcsF family; COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: fbc:FB2170_12361 hypothetical protein; PFAM: LamB/YcsF; SPTR: uncharacterized protein; LamB/YcsF family protein 5292137..5292874 Cyclobacterium marinum DSM 745 11036740 YP_004776299.1 CDS Cycma_4366 NC_015914.1 5292877 5293596 D PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833; KEGG: cao:Celal_3657 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: uncharacterized protein; allophanate hydrolase subunit 1 5292877..5293596 Cyclobacterium marinum DSM 745 11036741 YP_004776300.1 CDS Cycma_4367 NC_015914.1 5293589 5294458 D PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: zpr:ZPR_2806 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR: urea carboxylase; Allophanate hydrolase subunit 2 5293589..5294458 Cyclobacterium marinum DSM 745 11036742 YP_004776301.1 CDS Cycma_4368 NC_015914.1 5294479 5295177 R PFAM: Protein of unknown function (DUF3307); KEGG: fjo:Fjoh_2211 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5294479..5295177) Cyclobacterium marinum DSM 745 11036743 YP_004776302.1 CDS Cycma_4369 NC_015914.1 5295174 5295788 R KEGG: shg:Sph21_3661 regulatory protein MarR; SPTR: uncharacterized protein; regulatory protein MarR complement(5295174..5295788) Cyclobacterium marinum DSM 745 11036744 YP_004776303.1 CDS Cycma_4370 NC_015914.1 5295881 5297596 R PFAM: L-lactate permease; TIGRFAM: L-lactate transport; COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: rca:Rcas_1588 L-lactate transport; PFAM: L-lactate permease; SPTR: L-lactate transport; TIGRFAM: L-lactate permease; L-lactate transport complement(5295881..5297596) Cyclobacterium marinum DSM 745 11036745 YP_004776304.1 CDS Cycma_4371 NC_015914.1 5297631 5299721 R PFAM: Malate synthase; TIGRFAM: malate synthase A; COGs: COG2225 Malate synthase; InterPro IPR011076; KEGG: dpr:Despr_1204 malate synthase; PFAM: Malate synthase-like, core; SPTR: Malate synthase; malate synthase complement(5297631..5299721) Cyclobacterium marinum DSM 745 11036746 YP_004776305.1 CDS Cycma_4372 NC_015914.1 5300187 5302343 R PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: sli:Slin_1104 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Isoquinoline 1-oxidoreductase, beta subunit; aldehyde oxidase complement(5300187..5302343) Cyclobacterium marinum DSM 745 11036747 YP_004776306.1 CDS Cycma_4373 NC_015914.1 5302346 5302807 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: dfe:Dfer_3446 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding domain protein; (2Fe-2S)-binding protein complement(5302346..5302807) Cyclobacterium marinum DSM 745 11036748 YP_004776307.1 CDS Cycma_4374 NC_015914.1 5303166 5303969 D KEGG: shg:Sph21_1866 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5303166..5303969 Cyclobacterium marinum DSM 745 11036749 YP_004776308.1 CDS Cycma_4375 NC_015914.1 5304007 5305731 D PFAM: Protein of unknown function (DUF3380); KEGG: paa:Paes_1872 peptidoglycan-binding domain 1 protein; SPTR: Peptidoglycan-binding domain 1 protein; hypothetical protein 5304007..5305731 Cyclobacterium marinum DSM 745 11036750 YP_004776309.1 CDS Cycma_4376 NC_015914.1 5305719 5306348 D KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5305719..5306348 Cyclobacterium marinum DSM 745 11036751 YP_004776310.1 CDS Cycma_4377 NC_015914.1 5306345 5308441 D hypothetical protein 5306345..5308441 Cyclobacterium marinum DSM 745 11036752 YP_004776311.1 CDS Cycma_4378 NC_015914.1 5308472 5310811 R PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172; KEGG: npu:Npun_F2280 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; SPTR: Glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(5308472..5310811) Cyclobacterium marinum DSM 745 11036753 YP_004776312.1 CDS Cycma_4379 NC_015914.1 5310795 5312531 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: scl:sce2632 calcineurin-like phosphoesterase; PFAM: Metallophosphoesterase; SPTR: uncharacterized protein; metallophosphoesterase complement(5310795..5312531) Cyclobacterium marinum DSM 745 11036754 YP_004776313.1 CDS Cycma_4380 NC_015914.1 5312521 5313960 R PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: npu:Npun_F2284 patatin; PFAM: Patatin; SPTR: Patatin; patatin complement(5312521..5313960) Cyclobacterium marinum DSM 745 11036755 YP_004776314.1 CDS Cycma_4381 NC_015914.1 5314035 5314448 R KEGG: sur:STAUR_6635 patatin domain-containing protein; SPTR: Patatin domain protein; patatin domain-containing protein complement(5314035..5314448) Cyclobacterium marinum DSM 745 11036756 YP_004776315.1 CDS Cycma_4382 NC_015914.1 5314441 5314938 R KEGG: lch:Lcho_1869 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5314441..5314938) Cyclobacterium marinum DSM 745 11036757 YP_004776316.1 CDS Cycma_4383 NC_015914.1 5314954 5315841 R PFAM: Acetoacetate decarboxylase (ADC); KEGG: npu:Npun_F2282 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5314954..5315841) Cyclobacterium marinum DSM 745 11036758 YP_004776317.1 CDS Cycma_4384 NC_015914.1 5315851 5316864 R KEGG: npu:Npun_F2281 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5315851..5316864) Cyclobacterium marinum DSM 745 11036759 YP_004776318.1 CDS Cycma_4385 NC_015914.1 5317435 5319948 R PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'; COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014001:IPR001650:IPR005259:IPR011545; KEGG: dfe:Dfer_3377 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Primosomal protein N`; TIGRFAM: Primosomal protein n; primosomal protein N' complement(5317435..5319948) Cyclobacterium marinum DSM 745 11036760 YP_004776319.1 CDS Cycma_4386 NC_015914.1 5319964 5322012 R PFAM: Protein of unknown function, DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: dfe:Dfer_0027 protein of unknown function DUF255; SPTR: dTMP kinase; hypothetical protein complement(5319964..5322012) Cyclobacterium marinum DSM 745 11036761 YP_004776320.1 CDS Cycma_4387 NC_015914.1 5322009 5322995 R PFAM: GSCFA family; InterPro IPR014982; KEGG: lby:Lbys_3542 gscfa domain protein; PFAM: GSCFA; SPTR: Lipoprotein; GSCFA domain-containing protein complement(5322009..5322995) Cyclobacterium marinum DSM 745 11036762 YP_004776321.1 CDS Cycma_4388 NC_015914.1 5323231 5323479 D SPTR: uncharacterized protein; hypothetical protein 5323231..5323479 Cyclobacterium marinum DSM 745 11036763 YP_004776322.1 CDS Cycma_4389 NC_015914.1 5323529 5323972 R PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020594:IPR020070:IPR020069; KEGG: lby:Lbys_3018 lsu ribosomal protein l9p; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; 50S ribosomal protein L9 complement(5323529..5323972) Cyclobacterium marinum DSM 745 11036764 YP_004776323.1 CDS Cycma_4390 NC_015914.1 5324011 5324262 R PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; COGs: COG0238 Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; InterPro IPR001648; KEGG: lby:Lbys_3019 ssu ribosomal protein s18p; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; 30S ribosomal protein S18 complement(5324011..5324262) Cyclobacterium marinum DSM 745 11036765 YP_004776324.1 CDS Cycma_4391 NC_015914.1 5324259 5324630 R PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; InterPro IPR020814:IPR000529; KEGG: mtt:Ftrac_0280 SSU ribosomal protein s6p; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; 30S ribosomal protein S6 complement(5324259..5324630) Cyclobacterium marinum DSM 745 11036766 YP_004776325.1 CDS Cycma_4392 NC_015914.1 5324710 5325633 R KEGG: mtt:Ftrac_0285 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5324710..5325633) Cyclobacterium marinum DSM 745 11036767 YP_004776326.1 CDS Cycma_4393 NC_015914.1 5326114 5326887 R PFAM: Ribosomal RNA adenine dimethylase; KEGG: dfe:Dfer_0196 O-methyltransferase-like protein; SPTR: uncharacterized protein; O-methyltransferase-like protein complement(5326114..5326887) Cyclobacterium marinum DSM 745 11036768 YP_004776327.1 CDS Cycma_4394 NC_015914.1 5326898 5327284 R PFAM: Protein of unknown function (DUF525); COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; InterPro IPR007474; KEGG: mtt:Ftrac_0288 ApaG domain protein; PFAM: ApaG; SPTR: Phosphoserine phosphatase; ApaG domain-containing protein complement(5326898..5327284) Cyclobacterium marinum DSM 745 11036769 YP_004776328.1 CDS Cycma_4395 NC_015914.1 5327357 5328019 D PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; COGs: COG0692 Uracil DNA glycosylase; HAMAP: Uracil-DNA glycosylase; InterPro IPR002043:IPR005122; KEGG: bvu:BVU_4148 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase; TIGRFAM: Uracil-DNA glycosylase; uracil-DNA glycosylase 5327357..5328019 Cyclobacterium marinum DSM 745 11036770 YP_004776329.1 CDS Cycma_4396 NC_015914.1 5328157 5329233 R PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; InterPro IPR000223:IPR019759; KEGG: dfe:Dfer_0210 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; signal peptidase I complement(5328157..5329233) Cyclobacterium marinum DSM 745 11036771 YP_004776330.1 CDS Cycma_4397 NC_015914.1 5329244 5329969 R PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR011770:IPR000846; KEGG: dfe:Dfer_0209 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; dihydrodipicolinate reductase complement(5329244..5329969) Cyclobacterium marinum DSM 745 11036772 YP_004776331.1 CDS Cycma_4398 NC_015914.1 5329971 5330558 R KEGG: bvu:BVU_1913 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5329971..5330558) Cyclobacterium marinum DSM 745 11036773 YP_004776332.1 CDS Cycma_4399 NC_015914.1 5330580 5331503 R PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: mtt:Ftrac_3754 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: SpoOJ protein; TIGRFAM: ParB-like partition protein; parB-like partition protein complement(5330580..5331503) Cyclobacterium marinum DSM 745 11036774 YP_004776333.1 CDS Cycma_4400 NC_015914.1 5331517 5332296 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: mtt:Ftrac_3755 chromosome segregation atpase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Sporulation initiation inhibitor protein Soj; cobyrinic acid ac-diamide synthase complement(5331517..5332296) Cyclobacterium marinum DSM 745 11036775 YP_004776334.1 CDS Cycma_4401 NC_015914.1 5332303 5332986 R PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; HAMAP: UPF0173 metal-dependent hydrolase; KEGG: fjo:Fjoh_2786 beta-lactamase domain-containing protein; SPTR: UPF0173 metal-dependent hydrolase M23134_04293; metal-dependent hydrolase complement(5332303..5332986) Cyclobacterium marinum DSM 745 11036776 YP_004776335.1 CDS Cycma_4402 NC_015914.1 5333474 5335294 R PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane protein oxaA; InterPro IPR019998:IPR020001:IPR001708; KEGG: mtt:Ftrac_0306 membrane protein insertase, YidC/oxa1 family; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; Membrane insertion protein, OxoA/YidC, N-terminal; membrane protein OxaA complement(5333474..5335294) Cyclobacterium marinum DSM 745 11036777 YP_004776336.1 CDS Cycma_4403 NC_015914.1 5335346 5336968 R PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: chu:CHU_2536 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; SPTR: CTP synthase; TIGRFAM: CTP synthase; CTP synthase complement(5335346..5336968) Cyclobacterium marinum DSM 745 11036778 YP_004776337.1 CDS Cycma_4404 NC_015914.1 5337160 5337996 R PFAM: Fumarylacetoacetate (FAA) hydrolase; COGs: COG3970 Fumarylacetoacetate (FAA) hydrolase; InterPro IPR002529; KEGG: sli:Slin_1198 fumarylacetoacetate hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: Fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase complement(5337160..5337996) Cyclobacterium marinum DSM 745 11036779 YP_004776338.1 CDS Cycma_4405 NC_015914.1 5337998 5338207 D hypothetical protein 5337998..5338207 Cyclobacterium marinum DSM 745 11036861 YP_004776339.1 CDS Cycma_4406 NC_015914.1 5338288 5343384 R PFAM: Di-glucose binding within endoplasmic reticulum; InterPro IPR006626:IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR: uncharacterized protein; TIGRFAM: parallel beta-helix repeat containing protein; parallel beta-helix repeat containing protein complement(5338288..5343384) Cyclobacterium marinum DSM 745 11036862 YP_004776340.1 CDS Cycma_4407 NC_015914.1 5344186 5347479 R KEGG: mxa:MXAN_1696 Ig-like domain-containing protein; SPTR: Bacterial Ig-like domain protein; hypothetical protein complement(5344186..5347479) Cyclobacterium marinum DSM 745 11036863 YP_004776341.1 CDS Cycma_4408 NC_015914.1 5348116 5352573 R PFAM: Bacterial Ig-like domain (group 1); InterPro IPR003344; KEGG: sur:STAUR_2903 bacterial ig-like domain-containing protein; PFAM: Bacterial Ig-like, group 1; SMART: Bacterial Ig-like, group 1; SPTR: Bacterial Ig-like domain protein; Ig domain-containing protein complement(5348116..5352573) Cyclobacterium marinum DSM 745 11036864 YP_004776342.1 CDS Cycma_4409 NC_015914.1 5353603 5354967 R PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: eat:EAT1b_1222 gluconate transporter; PFAM: Gluconate transporter; SPTR: Gluconate transporter; TIGRFAM: Gluconate transporter; gluconate transporter complement(5353603..5354967) Cyclobacterium marinum DSM 745 11036865 YP_004776343.1 CDS Cycma_4410 NC_015914.1 5355036 5355677 R PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: sli:Slin_3955 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase; SPTR: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: KDPG/KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(5355036..5355677) Cyclobacterium marinum DSM 745 11036866 YP_004776344.1 CDS Cycma_4411 NC_015914.1 5355646 5356635 R PFAM: 2-keto-3-deoxy-galactonokinase; COGs: COG3734 2-keto-3-deoxy-galactonokinase; InterPro IPR007729; KEGG: sli:Slin_3954 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; SPTR: 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxy-galactonokinase complement(5355646..5356635) Cyclobacterium marinum DSM 745 11036867 YP_004776345.1 CDS Cycma_4412 NC_015914.1 5356994 5358118 R PFAM: Domain of Unknown Function (DUF748); KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5356994..5358118) Cyclobacterium marinum DSM 745 11036868 YP_004776346.1 CDS Cycma_4413 NC_015914.1 5358908 5362246 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1584 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug 5358908..5362246 Cyclobacterium marinum DSM 745 11036869 YP_004776347.1 CDS Cycma_4414 NC_015914.1 5362260 5363744 D PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_0688 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 5362260..5363744 Cyclobacterium marinum DSM 745 11036870 YP_004776348.1 CDS Cycma_4415 NC_015914.1 5363760 5364263 D hypothetical protein 5363760..5364263 Cyclobacterium marinum DSM 745 11036871 YP_004776349.1 CDS Cycma_4416 NC_015914.1 5364428 5364586 D hypothetical protein 5364428..5364586 Cyclobacterium marinum DSM 745 11036872 YP_004776350.1 CDS Cycma_4417 NC_015914.1 5364662 5367220 R PFAM: Phosphoesterase; Domain of unknown function (DUF756); TIGRFAM: phospholipase C, phosphocholine-specific, Pseudomonas-type; COGs: COG3511 Phospholipase C; InterPro IPR006311:IPR017767:IPR007312:IPR008475; KEGG: shg:Sph21_0662 phospholipase C, phosphocholine-specific; PFAM: Phosphoesterase; Protein of unknown function DUF756; SPTR: Phospholipase C, phosphocholine-specific; TIGRFAM: Phospholipase C, phosphocholine-specific; Twin-arginine translocation pathway, signal sequence; phospholipase C, phosphocholine-specific complement(5364662..5367220) Cyclobacterium marinum DSM 745 11036873 YP_004776351.1 CDS Cycma_4418 NC_015914.1 5367491 5368855 R PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: shg:Sph21_0663 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase; aldehyde dehydrogenase complement(5367491..5368855) Cyclobacterium marinum DSM 745 11036874 YP_004776352.1 CDS Cycma_4419 NC_015914.1 5368858 5369601 R PFAM: Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR011697; KEGG: peptidase C26; PFAM: Peptidase C26; SPTR: Glutamine amidotransferase, class II; peptidase C26 complement(5368858..5369601) Cyclobacterium marinum DSM 745 11036875 YP_004776353.1 CDS Cycma_4420 NC_015914.1 5369605 5370753 R PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: shg:Sph21_0665 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; SPTR: 3-dehydroquinate synthase; iron-containing alcohol dehydrogenase complement(5369605..5370753) Cyclobacterium marinum DSM 745 11036876 YP_004776354.1 CDS Cycma_4421 NC_015914.1 5370799 5372163 R PFAM: Glutamine synthetase, catalytic domain; COGs: COG0174 Glutamine synthetase; InterPro IPR008146; KEGG: shg:Sph21_0666 glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic region; SPTR: L-glutamine synthetase; glutamine synthetase complement(5370799..5372163) Cyclobacterium marinum DSM 745 11036877 YP_004776355.1 CDS Cycma_4422 NC_015914.1 5372160 5373494 R PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004757:IPR004841; KEGG: ppn:Palpr_0156 ethanolamine transporter; PFAM: Amino acid permease-associated region; SPTR: Ethanolamine transporter; TIGRFAM: Ethanolamine permease; ethanolamine transporter complement(5372160..5373494) Cyclobacterium marinum DSM 745 11036878 YP_004776356.1 CDS Cycma_4423 NC_015914.1 5373973 5374590 D PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: mtt:Ftrac_2782 deoxynucleoside kinase; PFAM: Deoxynucleoside kinase; SPTR: Deoxynucleoside kinase; deoxynucleoside kinase 5373973..5374590 Cyclobacterium marinum DSM 745 11036879 YP_004776357.1 CDS Cycma_4424 NC_015914.1 5374587 5375231 R KEGG: mtt:Ftrac_3782 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5374587..5375231) Cyclobacterium marinum DSM 745 11036880 YP_004776358.1 CDS Cycma_4425 NC_015914.1 5375278 5375418 R hypothetical protein complement(5375278..5375418) Cyclobacterium marinum DSM 745 11036881 YP_004776359.1 CDS Cycma_4426 NC_015914.1 5375692 5376030 D SPTR: Two-component system sensor protein; hypothetical protein 5375692..5376030 Cyclobacterium marinum DSM 745 11036882 YP_004776360.1 CDS Cycma_4427 NC_015914.1 5376098 5377801 D PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: ppn:Palpr_1600 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; manually curated; gamma-glutamyltransferase 5376098..5377801 Cyclobacterium marinum DSM 745 11036883 YP_004776361.1 CDS Cycma_4428 NC_015914.1 5377806 5378096 R KEGG: hypothetical protein; hypothetical protein complement(5377806..5378096) Cyclobacterium marinum DSM 745 11036884 YP_004776362.1 CDS Cycma_4429 NC_015914.1 5378202 5379320 R PFAM: Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: cao:Celal_0130 peptidase S41; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: Peptidase S41; peptidase S41 complement(5378202..5379320) Cyclobacterium marinum DSM 745 11036885 YP_004776363.1 CDS Cycma_4430 NC_015914.1 5379326 5380102 R KEGG: cao:Celal_0129 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5379326..5380102) Cyclobacterium marinum DSM 745 11036886 YP_004776364.1 CDS Cycma_4431 NC_015914.1 5380495 5381928 R KEGG: phe:Phep_0353 signal peptide; SPTR: Signal peptide; hypothetical protein complement(5380495..5381928) Cyclobacterium marinum DSM 745 11036887 YP_004776365.1 CDS Cycma_4432 NC_015914.1 5382134 5383852 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2218 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein complement(5382134..5383852) Cyclobacterium marinum DSM 745 11036888 YP_004776366.1 CDS Cycma_4433 NC_015914.1 5383897 5387019 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2262 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug complement(5383897..5387019) Cyclobacterium marinum DSM 745 11036889 YP_004776367.1 CDS Cycma_4434 NC_015914.1 5387815 5389359 R KEGG: mtt:Ftrac_0372 short-chain dehydrogenase; SPTR: Short-chain dehydrogenase; short-chain dehydrogenase complement(5387815..5389359) Cyclobacterium marinum DSM 745 11036890 YP_004776368.1 CDS Cycma_4435 NC_015914.1 5389572 5390114 R KEGG: cpi:Cpin_6080 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5389572..5390114) Cyclobacterium marinum DSM 745 11036891 YP_004776369.1 CDS Cycma_4436 NC_015914.1 5390310 5391842 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0630 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase; sulfatase complement(5390310..5391842) Cyclobacterium marinum DSM 745 11036892 YP_004776370.1 CDS Cycma_4437 NC_015914.1 5392402 5393478 D KEGG: vvm:VVM_02720 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5392402..5393478 Cyclobacterium marinum DSM 745 11036893 YP_004776371.1 CDS Cycma_4438 NC_015914.1 5393803 5396667 R PFAM: TrkA-N domain; hypothetical protein complement(5393803..5396667) Cyclobacterium marinum DSM 745 11036894 YP_004776372.1 CDS Cycma_4439 NC_015914.1 5397096 5398097 D KEGG: sli:Slin_3952 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5397096..5398097 Cyclobacterium marinum DSM 745 11036895 YP_004776373.1 CDS Cycma_4440 NC_015914.1 5398124 5398543 R KEGG: shg:Sph21_1564 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5398124..5398543) Cyclobacterium marinum DSM 745 11036896 YP_004776374.1 CDS Cycma_4441 NC_015914.1 5399024 5400136 D PFAM: Protein of unknown function (DUF2652); KEGG: fbc:FB2170_04430 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5399024..5400136 Cyclobacterium marinum DSM 745 11036897 YP_004776375.1 CDS Cycma_4442 NC_015914.1 5400336 5401628 R KEGG: sus:Acid_6155 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5400336..5401628) Cyclobacterium marinum DSM 745 11036898 YP_004776376.1 CDS Cycma_4443 NC_015914.1 5401726 5402502 R PFAM: Domain of unknown function (DUF1083); KEGG: dat:HRM2_08770 GGDEF domain protein (selenocysteine protein); SPTR: GGDEF domain protein (Selenocysteine protein); diguanylate cyclase complement(5401726..5402502) Cyclobacterium marinum DSM 745 11036899 YP_004776377.1 CDS Cycma_4444 NC_015914.1 5403011 5404588 D PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: rca:Rcas_2627 MlrC domain-containing protein; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: uncharacterized protein; microcystin LR degradation protein MlrC 5403011..5404588 Cyclobacterium marinum DSM 745 11036900 YP_004776378.1 CDS Cycma_4445 NC_015914.1 5404930 5406069 R PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: fbc:FB2170_04530 transporter; PFAM: Bile acid:sodium symporter; SPTR: transporter; bile acid:sodium symporter complement(5404930..5406069) Cyclobacterium marinum DSM 745 11036901 YP_004776379.1 CDS Cycma_4446 NC_015914.1 5406372 5406800 R PFAM: Uncharacterized protein conserved in bacteria (DUF2141); InterPro IPR018673; KEGG: sli:Slin_1194 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: uncharacterized protein; hypothetical protein complement(5406372..5406800) Cyclobacterium marinum DSM 745 11036902 YP_004776380.1 CDS Cycma_4447 NC_015914.1 5406843 5408084 R KEGG: fbc:FB2170_15283 outer membrane protein; SPTR: outer membrane protein; hypothetical protein complement(5406843..5408084) Cyclobacterium marinum DSM 745 11036903 YP_004776381.1 CDS Cycma_4448 NC_015914.1 5408324 5409610 D KEGG: fjo:Fjoh_1685 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 5408324..5409610 Cyclobacterium marinum DSM 745 11036904 YP_004776382.1 CDS Cycma_4451 NC_015914.1 5410888 5411934 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: ppn:Palpr_2694 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Histidine kinase; signal transduction histidine kinase 5410888..5411934 Cyclobacterium marinum DSM 745 11036906 YP_004776383.1 CDS Cycma_4452 NC_015914.1 5411931 5412674 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: psn:Pedsa_2901 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; LytTR family two component transcriptional regulator 5411931..5412674 Cyclobacterium marinum DSM 745 11036907 YP_004776384.1 CDS Cycma_4453 NC_015914.1 5412688 5412873 D hypothetical protein 5412688..5412873 Cyclobacterium marinum DSM 745 11036908 YP_004776385.1 CDS Cycma_4454 NC_015914.1 5412996 5414084 R TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fjo:Fjoh_4286 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(5412996..5414084) Cyclobacterium marinum DSM 745 11036909 YP_004776386.1 CDS Cycma_4455 NC_015914.1 5414074 5417358 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fjo:Fjoh_4285 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; acriflavin resistance protein complement(5414074..5417358) Cyclobacterium marinum DSM 745 11036910 YP_004776387.1 CDS Cycma_4456 NC_015914.1 5417368 5418753 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fjo:Fjoh_4284 outer membrane protein-like protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein-like protein; outer membrane efflux protein complement(5417368..5418753) Cyclobacterium marinum DSM 745 11036911 YP_004776388.1 CDS Cycma_4457 NC_015914.1 5418915 5419961 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: fjo:Fjoh_4283 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; signal transduction histidine kinase 5418915..5419961 Cyclobacterium marinum DSM 745 11036912 YP_004776389.1 CDS Cycma_4458 NC_015914.1 5419948 5420649 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fjo:Fjoh_4282 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; LytTR family two component transcriptional regulator 5419948..5420649 Cyclobacterium marinum DSM 745 11036913 YP_004776390.1 CDS Cycma_4459 NC_015914.1 5420837 5421916 R KEGG: rmr:Rmar_2745 HTTM domain-containing protein; SPTR: HTTM domain protein; HTTM domain-containing protein complement(5420837..5421916) Cyclobacterium marinum DSM 745 11036914 YP_004776391.1 CDS Cycma_4460 NC_015914.1 5421900 5422475 R hypothetical protein complement(5421900..5422475) Cyclobacterium marinum DSM 745 11036915 YP_004776392.1 CDS Cycma_4461 NC_015914.1 5422514 5423932 R PFAM: Thi4 family; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR003953; KEGG: phe:Phep_2084 FAD dependent oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Monooxygenase FAD-binding; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(5422514..5423932) Cyclobacterium marinum DSM 745 11036916 YP_004776393.1 CDS Cycma_4462 NC_015914.1 5424169 5425248 R KEGG: rmr:Rmar_2745 HTTM domain-containing protein; SPTR: HTTM domain protein; hypothetical protein complement(5424169..5425248) Cyclobacterium marinum DSM 745 11036917 YP_004776394.1 CDS Cycma_4463 NC_015914.1 5425229 5425804 R hypothetical protein complement(5425229..5425804) Cyclobacterium marinum DSM 745 11036918 YP_004776395.1 CDS Cycma_4464 NC_015914.1 5425852 5427270 R PFAM: Thi4 family; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: phe:Phep_2084 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase FAD-binding; FAD dependent oxidoreductase complement(5425852..5427270) Cyclobacterium marinum DSM 745 11036919 YP_004776396.1 CDS Cycma_4465 NC_015914.1 5427513 5427695 R hypothetical protein complement(5427513..5427695) Cyclobacterium marinum DSM 745 11036920 YP_004776397.1 CDS Cycma_4466 NC_015914.1 5428087 5429220 D SPTR: uncharacterized protein; hypothetical protein 5428087..5429220 Cyclobacterium marinum DSM 745 11036921 YP_004776398.1 CDS Cycma_4467 NC_015914.1 5429217 5430350 D SPTR: uncharacterized protein; hypothetical protein 5429217..5430350 Cyclobacterium marinum DSM 745 11036922 YP_004776399.1 CDS Cycma_4468 NC_015914.1 5430432 5432702 R PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: shg:Sph21_0134 aldehyde dehydrogenase (pyrroloquinoline-quinone); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Isoquinoline 1-oxidoreductase, beta subunit; aldehyde oxidase complement(5430432..5432702) Cyclobacterium marinum DSM 745 11036923 YP_004776400.1 CDS Cycma_4469 NC_015914.1 5432715 5433173 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: Isoquinoline 1-oxidoreductase; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: isoquinoline 1-oxidoreductase, alpha subunit; (2Fe-2S)-binding protein complement(5432715..5433173) Cyclobacterium marinum DSM 745 11036924 YP_004776401.1 CDS Cycma_4470 NC_015914.1 5433281 5435521 R PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: rbi:RB2501_01021 isoquinoline 1-oxidoreductase subunit beta; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Isoquinoline 1-oxidoreductase, beta subunit; aldehyde oxidase complement(5433281..5435521) Cyclobacterium marinum DSM 745 11036925 YP_004776402.1 CDS Cycma_4471 NC_015914.1 5435607 5436245 R PFAM: Flavodoxin; KEGG: flavodoxin; SPTR: Flavodoxin; flavodoxin complement(5435607..5436245) Cyclobacterium marinum DSM 745 11036926 YP_004776403.1 CDS Cycma_4473 NC_015914.1 5436722 5437171 R KEGG: rbi:RB2501_01046 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5436722..5437171) Cyclobacterium marinum DSM 745 11036928 YP_004776404.1 CDS Cycma_4474 NC_015914.1 5437206 5437325 D hypothetical protein 5437206..5437325 Cyclobacterium marinum DSM 745 11036929 YP_004776405.1 CDS Cycma_4475 NC_015914.1 5437462 5438460 D PFAM: Histidine kinase; COGs: COG3275 regulator of cell autolysis; InterPro IPR010559; KEGG: dfe:Dfer_0763 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; signal transduction histidine kinase 5437462..5438460 Cyclobacterium marinum DSM 745 11036930 YP_004776406.1 CDS Cycma_4476 NC_015914.1 5438457 5439161 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: dfe:Dfer_0764 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family; LytTR family two component transcriptional regulator 5438457..5439161 Cyclobacterium marinum DSM 745 11036931 YP_004776407.1 CDS Cycma_4477 NC_015914.1 5439194 5440063 R PFAM: Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867; KEGG: phe:Phep_0940 transcriptional regulator domain-containing protein; PFAM: Signal transduction response regulator, C-terminal; SPTR: DNA-binding response regulator RprY; winged helix family transcriptional regulator complement(5439194..5440063) Cyclobacterium marinum DSM 745 11036932 YP_004776408.1 CDS Cycma_4478 NC_015914.1 5440189 5441247 D PFAM: Two component regulator propeller; COGs: COG3292 periplasmic ligand-binding sensor domain; InterPro IPR011110; KEGG: cpi:Cpin_3143 two component regulator propeller domain protein; PFAM: Two component regulator propeller; SPTR: Two component regulator propeller domain protein; two component regulator propeller domain-containing protein 5440189..5441247 Cyclobacterium marinum DSM 745 11036933 YP_004776409.1 CDS Cycma_4479 NC_015914.1 5441561 5441815 R PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: gfo:GFO_0929 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: uncharacterized protein; plasmid stabilization system complement(5441561..5441815) Cyclobacterium marinum DSM 745 11036934 YP_004776410.1 CDS Cycma_4480 NC_015914.1 5441848 5442045 R hypothetical protein complement(5441848..5442045) Cyclobacterium marinum DSM 745 11036935 YP_004776411.1 CDS Cycma_4481 NC_015914.1 5442318 5443061 R PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: dfe:Dfer_2378 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: uncharacterized protein; hypothetical protein complement(5442318..5443061) Cyclobacterium marinum DSM 745 11036936 YP_004776412.1 CDS Cycma_4482 NC_015914.1 5443333 5446146 R PFAM: TonB dependent receptor; InterPro IPR000531; KEGG: dfe:Dfer_2379 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor complement(5443333..5446146) Cyclobacterium marinum DSM 745 11036937 YP_004776413.1 CDS Cycma_4483 NC_015914.1 5446598 5447461 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pdi:BDI_3256 transposase; PFAM: Transposase, IS4-like; SPTR: ISPg3, transposase; transposase IS4 family protein complement(5446598..5447461) Cyclobacterium marinum DSM 745 11036938 YP_004776414.1 CDS Cycma_4484 NC_015914.1 5448762 5448986 R hypothetical protein complement(5448762..5448986) Cyclobacterium marinum DSM 745 11036939 YP_004776415.1 CDS Cycma_4485 NC_015914.1 5449196 5451499 R PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; COGs: COG0550 Topoisomerase IA; InterProIPR006154:IPR003601:IPR003602:IPR005738:IPR 006171:IPR013497; KEGG: cao:Celal_3261 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SPTR: DNA topoisomerase III; TIGRFAM: DNA topoisomerase III, bacterial-type; DNA topoisomerase III complement(5449196..5451499) Cyclobacterium marinum DSM 745 11036940 YP_004776416.1 CDS Cycma_4486 NC_015914.1 5451891 5452232 R PFAM: HicB family; COGs: COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters; InterPro IPR008651; KEGG: fjo:Fjoh_0431 HicB family protein; SPTR: HicB protein; HicB family protein complement(5451891..5452232) Cyclobacterium marinum DSM 745 11036941 YP_004776417.1 CDS Cycma_4487 NC_015914.1 5452229 5452471 R KEGG: amr:AM1_B0340 hypothetical protein; SPTR: HicA protein; hypothetical protein complement(5452229..5452471) Cyclobacterium marinum DSM 745 11038238 YP_004776418.1 CDS Cycma_4488 NC_015914.1 5452776 5453426 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; KEGG: bfs:pBF9343.15 ParA-related protein; SPTR: uncharacterized protein; ParA-like protein complement(5452776..5453426) Cyclobacterium marinum DSM 745 11038239 YP_004776419.1 CDS Cycma_4489 NC_015914.1 5453439 5454941 R PFAM: Relaxase/Mobilisation nuclease domain; InterPro IPR005094; KEGG: bsa:Bacsa_3688 relaxase/mobilization nuclease; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR: uncharacterized protein; Relaxase/mobilization nuclease complement(5453439..5454941) Cyclobacterium marinum DSM 745 11038240 YP_004776420.1 CDS Cycma_4490 NC_015914.1 5454941 5455321 R PFAM: Bacterial mobilisation protein (MobC); SPTR: Mobilization protein; hypothetical protein complement(5454941..5455321) Cyclobacterium marinum DSM 745 11038241 YP_004776421.1 CDS Cycma_4493 NC_015914.1 5456507 5457955 R PFAM: Matrixin; InterPro IPR006026:IPR001818; KEGG: bfo:BRAFLDRAFT_264495 hypothetical protein; PFAM: Peptidase M10A/M12B, matrixin/adamalysin; SMART: Peptidase, metallopeptidases; SPTR: Karilysin protease; peptidase M10A and M12B matrixin and adamalysin complement(5456507..5457955) Cyclobacterium marinum DSM 745 11038244 YP_004776422.1 CDS Cycma_4494 NC_015914.1 5457959 5458336 R hypothetical protein complement(5457959..5458336) Cyclobacterium marinum DSM 745 11038245 YP_004776423.1 CDS Cycma_4496 NC_015914.1 5459427 5462516 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR004763:IPR001036; KEGG: mtt:Ftrac_1716 heavy metal efflux pump, czca family; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(5459427..5462516) Cyclobacterium marinum DSM 745 11038247 YP_004776424.1 CDS Cycma_4497 NC_015914.1 5462529 5464040 R TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: rbi:RB2501_01101 secretion protein HlyD; PFAM: Biotin/lipoyl attachment; Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(5462529..5464040) Cyclobacterium marinum DSM 745 11038248 YP_004776425.1 CDS Cycma_4498 NC_015914.1 5464062 5464283 R KEGG: mtt:Ftrac_1719 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5464062..5464283) Cyclobacterium marinum DSM 745 11038249 YP_004776426.1 CDS Cycma_4499 NC_015914.1 5464303 5465487 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: rbi:RB2501_01111 puter membrane protein; SPTR: puter membrane protein; outer membrane protein complement(5464303..5465487) Cyclobacterium marinum DSM 745 11038250 YP_004776427.1 CDS Cycma_4500 NC_015914.1 5465564 5465980 R KEGG: rbi:RB2501_01116 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5465564..5465980) Cyclobacterium marinum DSM 745 11038251 YP_004776428.1 CDS Cycma_4501 NC_015914.1 5466650 5467993 R PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; COGs: COG3004 Na+/H+ antiporter; HAMAP: Na+/H+ antiporter NhaA; InterPro IPR004670; KEGG: gfo:GFO_1203 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA 1; TIGRFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA complement(5466650..5467993) Cyclobacterium marinum DSM 745 11038252 YP_004776429.1 CDS Cycma_4502 NC_015914.1 5467978 5468334 R PFAM: Protein of unknown function (DUF3478); KEGG: gfo:GFO_1210 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5467978..5468334) Cyclobacterium marinum DSM 745 11038253 YP_004776430.1 CDS Cycma_4503 NC_015914.1 5468347 5469663 R PFAM: Amino acid permease; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841; KEGG: gfo:GFO_1208 amino acid permease; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease; amino acid permease complement(5468347..5469663) Cyclobacterium marinum DSM 745 11038254 YP_004776431.1 CDS Cycma_4504 NC_015914.1 5469671 5470501 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_2056 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein; cation efflux protein complement(5469671..5470501) Cyclobacterium marinum DSM 745 11038255 YP_004776432.1 CDS Cycma_4505 NC_015914.1 5470446 5470901 R PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: gfo:GFO_1201 Fur family transcriptional regulator protein; PFAM: Ferric-uptake regulator; SPTR: Fur family transcriptional regulator protein; Fur family ferric uptake regulator complement(5470446..5470901) Cyclobacterium marinum DSM 745 11038256 YP_004776433.1 CDS Cycma_4506 NC_015914.1 5470926 5473439 R PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006404:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: gfo:GFO_1200 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Cadmium translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; heavy metal translocating P-type ATPase complement(5470926..5473439) Cyclobacterium marinum DSM 745 11038257 YP_004776434.1 CDS Cycma_4507 NC_015914.1 5473561 5474937 R PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; COGs: COG3004 Na+/H+ antiporter; HAMAP: Na+/H+ antiporter NhaA; InterPro IPR004670; KEGG: gfo:GFO_1203 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA 1; TIGRFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA complement(5473561..5474937) Cyclobacterium marinum DSM 745 11038258 YP_004776435.1 CDS Cycma_4508 NC_015914.1 5474922 5475278 R PFAM: Protein of unknown function (DUF3478); KEGG: zpr:ZPR_4069 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5474922..5475278) Cyclobacterium marinum DSM 745 11038259 YP_004776436.1 CDS Cycma_4510 NC_015914.1 5475491 5475919 R PFAM: MgtC family; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: gfo:GFO_1199 MgtC/SapB family transporter; PFAM: MgtC/SapB transporter; SPTR: Membrane protein, MgtC; MgtC/SapB transporter complement(5475491..5475919) Cyclobacterium marinum DSM 745 11038261 YP_004776437.1 CDS Cycma_4511 NC_015914.1 5475935 5476711 R PFAM: Bestrophin; COGs: COG3781 membrane protein; InterPro IPR007913; KEGG: gfo:GFO_1198 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5475935..5476711) Cyclobacterium marinum DSM 745 11038262 YP_004776438.1 CDS Cycma_4512 NC_015914.1 5476723 5477142 R PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: mtt:Ftrac_1212 hypothetical protein; PFAM: Ferric-uptake regulator; SPTR: uncharacterized protein; Fur family ferric uptake regulator complement(5476723..5477142) Cyclobacterium marinum DSM 745 11038263 YP_004776439.1 CDS Cycma_4513 NC_015914.1 5477139 5477675 R KEGG: zpr:ZPR_4072 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5477139..5477675) Cyclobacterium marinum DSM 745 11038264 YP_004776440.1 CDS Cycma_4514 NC_015914.1 5477678 5478445 R PFAM: Divergent AAA domain; InterPro IPR007421; KEGG: gfo:GFO_1196 divergent AAA domain-containing protein; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Membrane protein containing divergent AAA domain; ATPase AAA complement(5477678..5478445) Cyclobacterium marinum DSM 745 11038265 YP_004776441.1 CDS Cycma_4515 NC_015914.1 5478510 5478728 R PFAM: Predicted membrane protein (DUF2078); InterPro IPR018649; KEGG: zpr:ZPR_4077 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: uncharacterized protein; hypothetical protein complement(5478510..5478728) Cyclobacterium marinum DSM 745 11038266 YP_004776442.1 CDS Cycma_4516 NC_015914.1 5479124 5479465 R PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: zpr:ZPR_4080 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(5479124..5479465) Cyclobacterium marinum DSM 745 11038267 YP_004776443.1 CDS Cycma_4517 NC_015914.1 5479536 5479913 R PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: gfo:GFO_2796 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: uncharacterized protein; S23 ribosomal protein complement(5479536..5479913) Cyclobacterium marinum DSM 745 11038268 YP_004776444.1 CDS Cycma_4518 NC_015914.1 5480001 5481284 R TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_1187 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR: lipoprotein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(5480001..5481284) Cyclobacterium marinum DSM 745 11038269 YP_004776445.1 CDS Cycma_4519 NC_015914.1 5481284 5485696 R PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: gfo:GFO_1186 AcrB/AcrD/AcrF family heavy metal cation efflux protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: AcrB/AcrD/AcrF family heavy metal cation efflux protein containing OEP domains; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(5481284..5485696) Cyclobacterium marinum DSM 745 11038270 YP_004776446.1 CDS Cycma_4520 NC_015914.1 5485717 5485884 D hypothetical protein 5485717..5485884 Cyclobacterium marinum DSM 745 11038271 YP_004776447.1 CDS Cycma_4521 NC_015914.1 5486020 5486301 R KEGG: mtt:Ftrac_1217 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5486020..5486301) Cyclobacterium marinum DSM 745 11038272 YP_004776448.1 CDS Cycma_4523 NC_015914.1 5487869 5488093 D hypothetical protein 5487869..5488093 Cyclobacterium marinum DSM 745 11038274 YP_004776449.1 CDS Cycma_4524 NC_015914.1 5488123 5488284 D KEGG: gfo:GFO_1320 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5488123..5488284 Cyclobacterium marinum DSM 745 11038275 YP_004776450.1 CDS Cycma_4526 NC_015914.1 5488724 5489101 D PFAM: Bacterial regulatory protein, arsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: mtt:Ftrac_1223 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family transcriptional regulator; ArsR family transcriptional regulator 5488724..5489101 Cyclobacterium marinum DSM 745 11038277 YP_004776451.1 CDS Cycma_4527 NC_015914.1 5489098 5489724 D PFAM: Heavy-metal-associated domain; MerT mercuric transport protein; TIGRFAM: copper ion binding protein; COGs: COG2608 Copper chaperone; InterPro IPR003457:IPR006121; KEGG: mtt:Ftrac_1224 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: Probable mercuric transport protein; heavy metal transport/detoxification protein 5489098..5489724 Cyclobacterium marinum DSM 745 11038278 YP_004776452.1 CDS Cycma_4529 NC_015914.1 5490132 5491478 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: mtt:Ftrac_1225 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5490132..5491478 Cyclobacterium marinum DSM 745 11038280 YP_004776453.1 CDS Cycma_4530 NC_015914.1 5491512 5493164 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR011796:IPR006121:IPR013027:IPR004099; KEGG: zpr:ZPR_4025 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Possible mercury(II) reductase; TIGRFAM: Mercuric reductase MerA; mercuric reductase 5491512..5493164 Cyclobacterium marinum DSM 745 11038281 YP_004776454.1 CDS Cycma_4531 NC_015914.1 5493144 5493254 R hypothetical protein complement(5493144..5493254) Cyclobacterium marinum DSM 745 11038282 YP_004776455.1 CDS Cycma_4534 NC_015914.1 5495052 5495261 R PFAM: Heavy-metal-associated domain; KEGG: mtt:Ftrac_2058 protein containing heavy-metal-associated domain; SPTR: Protein containing heavy-metal-associated domain; hypothetical protein complement(5495052..5495261) Cyclobacterium marinum DSM 745 11038285 YP_004776456.1 CDS Cycma_4535 NC_015914.1 5495295 5497562 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR006121:IPR 008250:IPR005834; KEGG: mtt:Ftrac_2059 heavy metal translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; copper-translocating P-type ATPase complement(5495295..5497562) Cyclobacterium marinum DSM 745 11038286 YP_004776457.1 CDS Cycma_4536 NC_015914.1 5497702 5498274 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2060 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(5497702..5498274) Cyclobacterium marinum DSM 745 11038287 YP_004776458.1 CDS Cycma_4537 NC_015914.1 5498422 5499471 R PFAM: DeoC/LacD family aldolase; COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: mtt:Ftrac_2063 fructose-bisphosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(5498422..5499471) Cyclobacterium marinum DSM 745 11038288 YP_004776459.1 CDS Cycma_4538 NC_015914.1 5499505 5500734 R PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: mtt:Ftrac_2064 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein complement(5499505..5500734) Cyclobacterium marinum DSM 745 11038289 YP_004776460.1 CDS Cycma_4539 NC_015914.1 5500734 5502821 R PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: mtt:Ftrac_2065 copper-translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; copper-translocating P-type ATPase complement(5500734..5502821) Cyclobacterium marinum DSM 745 11038290 YP_004776461.1 CDS Cycma_4540 NC_015914.1 5502834 5503565 R PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: mtt:Ftrac_2066 hypothetical protein; PFAM: Polyphosphate kinase 2; SPTR: uncharacterized protein; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; polyphosphate:nucleotide phosphotransferase complement(5502834..5503565) Cyclobacterium marinum DSM 745 11038291 YP_004776462.1 CDS Cycma_4542 NC_015914.1 5503819 5504493 R PFAM: Rhodanese-like domain; InterPro IPR001763; KEGG: mtt:Ftrac_2100 rhodanese domain protein; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; rhodanese-like protein complement(5503819..5504493) Cyclobacterium marinum DSM 745 11038293 YP_004776463.1 CDS Cycma_4543 NC_015914.1 5504531 5505844 R PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: mtt:Ftrac_2068 amino acid/polyamine/organocation transporter, apc superfamily; PFAM: Amino acid permease-associated region; SPTR: Amino acid/polyamine/organocation transporter, APC superfamily; amino acid permease complement(5504531..5505844) Cyclobacterium marinum DSM 745 11038294 YP_004776464.1 CDS Cycma_4544 NC_015914.1 5505861 5506538 R KEGG: mtt:Ftrac_2069 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5505861..5506538) Cyclobacterium marinum DSM 745 11038295 YP_004776465.1 CDS Cycma_4545 NC_015914.1 5506531 5507427 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: mtt:Ftrac_2070 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; ribose-phosphate pyrophosphokinase complement(5506531..5507427) Cyclobacterium marinum DSM 745 11038296 YP_004776466.1 CDS Cycma_4546 NC_015914.1 5507432 5508997 R PFAM: Glycosyl transferase, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase, helical bundle domain; TIGRFAM: thymidine phosphorylase; COGs: COG0213 Thymidine phosphorylase; HAMAP: Thymidine phosphorylase related; InterPro IPR013466:IPR013102; KEGG: mtt:Ftrac_2071 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase, C-terminal; SPTR: Thymidine phosphorylase; TIGRFAM: Thymidine phosphorylase related; thymidine phosphorylase complement(5507432..5508997) Cyclobacterium marinum DSM 745 11038297 YP_004776467.1 CDS Cycma_4547 NC_015914.1 5508952 5510322 R PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: mtt:Ftrac_2072 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: RNA-metabolising metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase complement(5508952..5510322) Cyclobacterium marinum DSM 745 11038298 YP_004776468.1 CDS Cycma_4548 NC_015914.1 5510344 5511198 R PFAM: ATP cone domain; Restriction endonuclease; InterPro IPR007560; KEGG: mtt:Ftrac_2073 ATP-cone domain protein; PFAM: Restriction endonuclease, type IV-like, Mrr; SPTR: ATP-cone domain protein; restriction endonuclease complement(5510344..5511198) Cyclobacterium marinum DSM 745 11038299 YP_004776469.1 CDS Cycma_4549 NC_015914.1 5511748 5514192 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_7106 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Possible tonB-linked outer membrane receptor; TonB-dependent receptor complement(5511748..5514192) Cyclobacterium marinum DSM 745 11038300 YP_004776470.1 CDS Cycma_4550 NC_015914.1 5514301 5514696 R hypothetical protein complement(5514301..5514696) Cyclobacterium marinum DSM 745 11038301 YP_004776471.1 CDS Cycma_4552 NC_015914.1 5515600 5519178 R PFAM: domain; Domain of unknown function; 4Fe-4S binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(5515600..5519178) Cyclobacterium marinum DSM 745 11038303 YP_004776472.1 CDS Cycma_4553 NC_015914.1 5519169 5520818 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR001450; KEGG: mca:MCA0770 glutamate synthase (NADPH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5519169..5520818) Cyclobacterium marinum DSM 745 11038304 YP_004776473.1 CDS Cycma_4554 NC_015914.1 5520867 5521961 R PFAM: CBS domain; Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR000644:IPR008915; KEGG: peptidase M50; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SPTR: Peptidase M50; peptidase M50 complement(5520867..5521961) Cyclobacterium marinum DSM 745 11038305 YP_004776474.1 CDS Cycma_4555 NC_015914.1 5521958 5524315 R KEGG: chd:Calhy_0247 spermine synthase; SPTR: Spermine synthase; hypothetical protein complement(5521958..5524315) Cyclobacterium marinum DSM 745 11038306 YP_004776475.1 CDS Cycma_4556 NC_015914.1 5524296 5525297 R PFAM: Phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023; KEGG: zpr:ZPR_3404 6-phosphofructokinase; PFAM: Phosphofructokinase; SPTR: 6-phosphofructokinase 2; 6-phosphofructokinase complement(5524296..5525297) Cyclobacterium marinum DSM 745 11038307 YP_004776476.1 CDS Cycma_4557 NC_015914.1 5525374 5527932 R PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: geb:GM18_3980 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: uncharacterized protein; TIGRFAM: Alpha-glucan phosphorylase; alpha-glucan phosphorylase complement(5525374..5527932) Cyclobacterium marinum DSM 745 11038308 YP_004776477.1 CDS Cycma_4558 NC_015914.1 5527953 5528873 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: zpr:ZPR_3403 carboxylesterase (est-1); PFAM: Alpha/beta hydrolase fold-1; SPTR: Carboxylesterase (Est-1); alpha/beta hydrolase complement(5527953..5528873) Cyclobacterium marinum DSM 745 11038309 YP_004776478.1 CDS Cycma_4559 NC_015914.1 5528878 5529597 R PFAM: Protein of unknown function (DUF3347); KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; SPTR: Secretion protein HlyD; hypothetical protein complement(5528878..5529597) Cyclobacterium marinum DSM 745 11038310 YP_004776479.1 CDS Cycma_4560 NC_015914.1 5529608 5531293 R PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: chu:CHU_0959 A-glucosidase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: A-glycosidase, glycoside hydrolase 13 protein; alpha amylase complement(5529608..5531293) Cyclobacterium marinum DSM 745 11038311 YP_004776480.1 CDS Cycma_4561 NC_015914.1 5531328 5532677 R PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: rbi:RB2501_04810 proton/sodium-glutamate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Proton/sodium-glutamate symporter; sodium:dicarboxylate symporter complement(5531328..5532677) Cyclobacterium marinum DSM 745 11038312 YP_004776481.1 CDS Cycma_4563 NC_015914.1 5533068 5534096 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; HAMAP: Glyceraldehyde-3-phosphate dehydrogenase; InterPro IPR006436:IPR020828:IPR020829; KEGG: zpr:ZPR_3400 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II; glyceraldehyde-3-phosphate dehydrogenase complement(5533068..5534096) Cyclobacterium marinum DSM 745 11038314 YP_004776482.1 CDS Cycma_4565 NC_015914.1 5535294 5536322 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; HAMAP: Glyceraldehyde-3-phosphate dehydrogenase; InterPro IPR006436:IPR020828; KEGG: mtt:Ftrac_2076 glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type II; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II; glyceraldehyde-3-phosphate dehydrogenase complement(5535294..5536322) Cyclobacterium marinum DSM 745 11038316 YP_004776483.1 CDS Cycma_4566 NC_015914.1 5536426 5536986 R PFAM: Ion channel; InterPro IPR013099; KEGG: mtt:Ftrac_2077 ion transport 2 domain protein; PFAM: Ion transport 2; SPTR: Ion transport 2 domain protein; Ion transport 2 domain-containing protein complement(5536426..5536986) Cyclobacterium marinum DSM 745 11038317 YP_004776484.1 CDS Cycma_4567 NC_015914.1 5536993 5538306 R PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; COGs: COG3004 Na+/H+ antiporter; HAMAP: Na+/H+ antiporter NhaA; InterPro IPR004670; KEGG: mtt:Ftrac_2078 sodium/proton antiporter, NhaA family; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA; TIGRFAM: Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter NhaA complement(5536993..5538306) Cyclobacterium marinum DSM 745 11038318 YP_004776485.1 CDS Cycma_4568 NC_015914.1 5538303 5539631 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: zpr:ZPR_3398 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(5538303..5539631) Cyclobacterium marinum DSM 745 11038319 YP_004776486.1 CDS Cycma_4569 NC_015914.1 5539624 5540343 R KEGG: zpr:ZPR_3396 hypothetical protein; SPTR: Membrane protein; hypothetical protein complement(5539624..5540343) Cyclobacterium marinum DSM 745 11038320 YP_004776487.1 CDS Cycma_4570 NC_015914.1 5540354 5540635 R KEGG: mtt:Ftrac_2081 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5540354..5540635) Cyclobacterium marinum DSM 745 11038321 YP_004776488.1 CDS Cycma_4571 NC_015914.1 5540616 5540849 R KEGG: mtt:Ftrac_2082 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5540616..5540849) Cyclobacterium marinum DSM 745 11038322 YP_004776489.1 CDS Cycma_4572 NC_015914.1 5540861 5541346 R KEGG: mtt:Ftrac_2083 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5540861..5541346) Cyclobacterium marinum DSM 745 11038323 YP_004776490.1 CDS Cycma_4573 NC_015914.1 5541351 5542184 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_2084 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; UspA domain-containing protein complement(5541351..5542184) Cyclobacterium marinum DSM 745 11038324 YP_004776491.1 CDS Cycma_4574 NC_015914.1 5542181 5542525 R PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mtt:Ftrac_2085 nitrogen regulatory protein p-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(5542181..5542525) Cyclobacterium marinum DSM 745 11038325 YP_004776492.1 CDS Cycma_4575 NC_015914.1 5542522 5542734 R PFAM: Predicted membrane protein (DUF2078); InterPro IPR018649; KEGG: mtt:Ftrac_2086 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: uncharacterized protein; hypothetical protein complement(5542522..5542734) Cyclobacterium marinum DSM 745 11038326 YP_004776493.1 CDS Cycma_4576 NC_015914.1 5542961 5543236 R PFAM: YHS domain; InterPro IPR007029; KEGG: mtt:Ftrac_2087 yhs domain-containing protein; PFAM: YHS; SPTR: YHS domain-containing protein; hypothetical protein complement(5542961..5543236) Cyclobacterium marinum DSM 745 11038327 YP_004776494.1 CDS Cycma_4577 NC_015914.1 5543240 5543629 R PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: mtt:Ftrac_2088 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR: uncharacterized protein; hypothetical protein complement(5543240..5543629) Cyclobacterium marinum DSM 745 11038328 YP_004776495.1 CDS Cycma_4578 NC_015914.1 5543646 5543954 R KEGG: mtt:Ftrac_2089 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5543646..5543954) Cyclobacterium marinum DSM 745 11038329 YP_004776496.1 CDS Cycma_4579 NC_015914.1 5544360 5545223 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2090 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(5544360..5545223) Cyclobacterium marinum DSM 745 11038330 YP_004776497.1 CDS Cycma_4580 NC_015914.1 5545607 5546074 R KEGG: mtt:Ftrac_2091 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5545607..5546074) Cyclobacterium marinum DSM 745 11038331 YP_004776498.1 CDS Cycma_4581 NC_015914.1 5546188 5546844 R KEGG: mtt:Ftrac_2092 membrane protein; SPTR: Membrane protein; hypothetical protein complement(5546188..5546844) Cyclobacterium marinum DSM 745 11038332 YP_004776499.1 CDS Cycma_4582 NC_015914.1 5547095 5548006 R PFAM: Ion channel; InterPro IPR013099; KEGG: gfo:GFO_1177 hypothetical protein; PFAM: Ion transport 2; SPTR: uncharacterized protein; Ion transport 2 domain-containing protein complement(5547095..5548006) Cyclobacterium marinum DSM 745 11038333 YP_004776500.1 CDS Cycma_4583 NC_015914.1 5548119 5549291 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgi:PG1658 ISPg4, transposase; PFAM: Transposase, IS4-like; SPTR: ISPg4, transposase; transposase IS4 family protein 5548119..5549291 Cyclobacterium marinum DSM 745 11038334 YP_004776501.1 CDS Cycma_4584 NC_015914.1 5549421 5550941 R PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: gfo:GFO_1248 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; SPTR: Ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase complement(5549421..5550941) Cyclobacterium marinum DSM 745 11038335 YP_004776502.1 CDS Cycma_4585 NC_015914.1 5550953 5552227 R PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: mtt:Ftrac_2098 amino acid/polyamine/organocation transporter, apc superfamily; PFAM: Amino acid permease-associated region; SPTR: Amino acid/polyamine/organocation transporter, APC superfamily; amino acid permease complement(5550953..5552227) Cyclobacterium marinum DSM 745 11038336 YP_004776503.1 CDS Cycma_4586 NC_015914.1 5552256 5552723 R PFAM: Rhodanese-like domain; InterPro IPR001763; KEGG: mtt:Ftrac_2100 rhodanese domain protein; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; rhodanese-like protein complement(5552256..5552723) Cyclobacterium marinum DSM 745 11038337 YP_004776504.1 CDS Cycma_4587 NC_015914.1 5552806 5553015 R PFAM: Predicted membrane protein (DUF2078); InterPro IPR018649; KEGG: mtt:Ftrac_2099 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: uncharacterized protein; hypothetical protein complement(5552806..5553015) Cyclobacterium marinum DSM 745 11038338 YP_004776505.1 CDS Cycma_4588 NC_015914.1 5553096 5553689 R KEGG: mtt:Ftrac_2102 membrane or secreted protein; SPTR: Membrane or secreted protein; hypothetical protein complement(5553096..5553689) Cyclobacterium marinum DSM 745 11038339 YP_004776506.1 CDS Cycma_4589 NC_015914.1 5553710 5553946 R KEGG: mtt:Ftrac_2103 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5553710..5553946) Cyclobacterium marinum DSM 745 11038340 YP_004776507.1 CDS Cycma_4590 NC_015914.1 5553992 5554456 R PFAM: Domain of unknown function DUF302; InterPro IPR005180; KEGG: rbi:RB2501_04705 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR: uncharacterized protein; hypothetical protein complement(5553992..5554456) Cyclobacterium marinum DSM 745 11038341 YP_004776508.1 CDS Cycma_4591 NC_015914.1 5554484 5554852 R PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: mtt:Ftrac_2105 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR: uncharacterized protein; hypothetical protein complement(5554484..5554852) Cyclobacterium marinum DSM 745 11038342 YP_004776509.1 CDS Cycma_4592 NC_015914.1 5555009 5555572 R PFAM: Domain of unknown function (DUF305); InterPro IPR005183; KEGG: zpr:ZPR_4065 hypothetical protein; PFAM: Protein of unknown function DUF305; SPTR: Membrane protein; hypothetical protein complement(5555009..5555572) Cyclobacterium marinum DSM 745 11038343 YP_004776510.1 CDS Cycma_4593 NC_015914.1 5555632 5557959 R PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; COGs: COG2132 multicopper oxidase; InterPro IPR011707:IPR001117:IPR011706; KEGG: mtt:Ftrac_2106 multicopper oxidase type 3; PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Multicopper oxidase, type 2; SPTR: Multicopper oxidase type 3; multicopper oxidase type 3 complement(5555632..5557959) Cyclobacterium marinum DSM 745 11038344 YP_004776511.1 CDS Cycma_4594 NC_015914.1 5558188 5559360 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgi:PG1658 ISPg4, transposase; PFAM: Transposase, IS4-like; SPTR: ISPg4, transposase; transposase IS4 family protein complement(5558188..5559360) Cyclobacterium marinum DSM 745 11038345 YP_004776512.1 CDS Cycma_4595 NC_015914.1 5559466 5560044 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2107 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; manually curated; AraC family transcriptional regulator complement(5559466..5560044) Cyclobacterium marinum DSM 745 11038346 YP_004776513.1 CDS Cycma_4596 NC_015914.1 5560046 5560435 R KEGG: mtt:Ftrac_2108 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5560046..5560435) Cyclobacterium marinum DSM 745 11038347 YP_004776514.1 CDS Cycma_4597 NC_015914.1 5560525 5561040 R PFAM: Protein of unknown function (DUF3347); KEGG: mtt:Ftrac_2110 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5560525..5561040) Cyclobacterium marinum DSM 745 11038348 YP_004776515.1 CDS Cycma_4598 NC_015914.1 5561192 5562991 R PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(5561192..5562991) Cyclobacterium marinum DSM 745 11038349 YP_004776516.1 CDS Cycma_4599 NC_015914.1 5562993 5564240 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_2112 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein complement(5562993..5564240) Cyclobacterium marinum DSM 745 11038350 YP_004776517.1 CDS Cycma_4600 NC_015914.1 5564237 5568061 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 silver efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_2113 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; acriflavin resistance protein complement(5564237..5568061) Cyclobacterium marinum DSM 745 11038351 YP_004776518.1 CDS Cycma_4601 NC_015914.1 5568164 5568583 R KEGG: mtt:Ftrac_2114 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5568164..5568583) Cyclobacterium marinum DSM 745 11038352 YP_004776519.1 CDS Cycma_4602 NC_015914.1 5568580 5568729 R hypothetical protein complement(5568580..5568729) Cyclobacterium marinum DSM 745 11038353 YP_004776520.1 CDS Cycma_4603 NC_015914.1 5569057 5570328 R KEGG: mtt:Ftrac_2116 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5569057..5570328) Cyclobacterium marinum DSM 745 11038354 YP_004776521.1 CDS Cycma_4604 NC_015914.1 5570342 5570938 R PFAM: YceI-like domain; InterPro IPR007372; KEGG: zpr:ZPR_0535 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Secreted protein; hypothetical protein complement(5570342..5570938) Cyclobacterium marinum DSM 745 11038355 YP_004776522.1 CDS Cycma_4605 NC_015914.1 5571631 5572557 R PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: chu:CHU_1181 response regulator, positive activator of UhpT transcription; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(5571631..5572557) Cyclobacterium marinum DSM 745 11038356 YP_004776523.1 CDS Cycma_4606 NC_015914.1 5572564 5573127 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: phe:Phep_1791 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5572564..5573127) Cyclobacterium marinum DSM 745 11038357 YP_004776524.1 CDS Cycma_4607 NC_015914.1 5573721 5574596 R KEGG: osp:Odosp_2005 transposon-related/mobilization protein; SPTR: uncharacterized protein; transposon-related/mobilization protein complement(5573721..5574596) Cyclobacterium marinum DSM 745 11038358 YP_004776525.1 CDS Cycma_4608 NC_015914.1 5574805 5576040 R PFAM: Virulence-associated protein E; COGs: COG5545 P-loop ATPase and inactivated derivatives; InterPro IPR007936; KEGG: fps:FP0491 hypothetical protein; PFAM: Virulence-associated E; SPTR: uncharacterized protein; virulence-associated E family protein complement(5574805..5576040) Cyclobacterium marinum DSM 745 11038359 YP_004776526.1 CDS Cycma_4609 NC_015914.1 5576125 5576406 R hypothetical protein complement(5576125..5576406) Cyclobacterium marinum DSM 745 11038360 YP_004776527.1 CDS Cycma_4610 NC_015914.1 5576552 5576779 D hypothetical protein 5576552..5576779 Cyclobacterium marinum DSM 745 11038361 YP_004776528.1 CDS Cycma_4611 NC_015914.1 5577477 5578088 D PFAM: Fumarylacetoacetate (FAA) hydrolase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: mtt:Ftrac_0978 fumarylacetoacetate (faa) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: Fumarylacetoacetate hydrolase; fumarylacetoacetate (FAA) hydrolase 5577477..5578088 Cyclobacterium marinum DSM 745 11038363 YP_004776529.1 CDS Cycma_4612 NC_015914.1 5578048 5579943 D PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_0979 peptidase M23; PFAM: Peptidase M23; SPTR: peptidase; peptidase M23 5578048..5579943 Cyclobacterium marinum DSM 745 11038364 YP_004776530.1 CDS Cycma_4613 NC_015914.1 5579998 5580447 D PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: mtt:Ftrac_0980 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Bacterioferritin comigratory protein; alkyl hydroperoxide reductase 5579998..5580447 Cyclobacterium marinum DSM 745 11038365 YP_004776531.1 CDS Cycma_4614 NC_015914.1 5580458 5581309 D PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: shg:Sph21_3915 transketolase; PFAM: Transketolase, N-terminal; SPTR: Transketolase, N-subunit; transketolase domain-containing protein 5580458..5581309 Cyclobacterium marinum DSM 745 11038366 YP_004776532.1 CDS Cycma_4615 NC_015914.1 5581343 5582311 D PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: mtt:Ftrac_0983 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: Transketolase, C-subunit; transketolase central region 5581343..5582311 Cyclobacterium marinum DSM 745 11038367 YP_004776533.1 CDS Cycma_4616 NC_015914.1 5582661 5583608 D KEGG: cak:Caul_1469 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5582661..5583608 Cyclobacterium marinum DSM 745 11038368 YP_004776534.1 CDS Cycma_4617 NC_015914.1 5583713 5584048 R SPTR: uncharacterized protein; hypothetical protein complement(5583713..5584048) Cyclobacterium marinum DSM 745 11038369 YP_004776535.1 CDS Cycma_4618 NC_015914.1 5584239 5584463 D hypothetical protein 5584239..5584463 Cyclobacterium marinum DSM 745 11038370 YP_004776536.1 CDS Cycma_4619 NC_015914.1 5584444 5585160 R PFAM: Protein of unknown function (DUF1003); COGs: COG4420 membrane protein; InterPro IPR010406; KEGG: chu:CHU_1621 hypothetical protein; PFAM: Protein of unknown function DUF1003; SPTR: uncharacterized protein; hypothetical protein complement(5584444..5585160) Cyclobacterium marinum DSM 745 11038371 YP_004776537.1 CDS Cycma_4620 NC_015914.1 5585412 5586074 R hypothetical protein complement(5585412..5586074) Cyclobacterium marinum DSM 745 11038372 YP_004776538.1 CDS Cycma_4621 NC_015914.1 5586071 5586676 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5586071..5586676) Cyclobacterium marinum DSM 745 11038373 YP_004776539.1 CDS Cycma_4622 NC_015914.1 5587105 5588895 D PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR005148:IPR015945:IPR008909:IPR001278; KEGG: chu:CHU_1577 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; arginyl-tRNA synthetase 5587105..5588895 Cyclobacterium marinum DSM 745 11038374 YP_004776540.1 CDS Cycma_4623 NC_015914.1 5588898 5589512 D PFAM: Glutathione peroxidase; COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: sli:Slin_0040 peroxiredoxin; PFAM: Glutathione peroxidase; SPTR: Glutathione peroxidase; glutathione peroxidase 5588898..5589512 Cyclobacterium marinum DSM 745 11038375 YP_004776541.1 CDS Cycma_4624 NC_015914.1 5589604 5590509 D PFAM: UbiA prenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR000537:IPR004657; KEGG: dfe:Dfer_2681 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 5589604..5590509 Cyclobacterium marinum DSM 745 11038376 YP_004776542.1 CDS Cycma_4625 NC_015914.1 5590583 5591440 D PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_3238 UspA domain-containing protein; PFAM: UspA; SPTR: universal stress protein; UspA domain-containing protein 5590583..5591440 Cyclobacterium marinum DSM 745 11038377 YP_004776543.1 CDS Cycma_4626 NC_015914.1 5591452 5591808 D PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, , prokaryotic; COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: mtt:Ftrac_0168 translation initiation factor 1 (eif-1/SUI1); PFAM: Translation initiation factor SUI1; SPTR: translation initiation factor SUI1; translation initiation factor SUI1 5591452..5591808 Cyclobacterium marinum DSM 745 11038378 YP_004776544.1 CDS Cycma_4627 NC_015914.1 5592034 5593278 D PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; COGs: COG0373 Glutamyl-tRNA reductase; KEGG: dfe:Dfer_2489 glutamyl-tRNA reductase; SPTR: Glutamyl-tRNA reductase; hypothetical protein 5592034..5593278 Cyclobacterium marinum DSM 745 11038379 YP_004776545.1 CDS Cycma_4628 NC_015914.1 5593419 5594771 D PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329 transposase; SPTR: transposase; transposase 5593419..5594771 Cyclobacterium marinum DSM 745 11038380 YP_004776546.1 CDS Cycma_4629 NC_015914.1 5595593 5596453 D PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: ATP phosphoribosyltransferase; Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR013820:IPR013115:IPR020621; KEGG: mtt:Ftrac_0079 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; ATP phosphoribosyltransferase 5595593..5596453 Cyclobacterium marinum DSM 745 11038381 YP_004776547.1 CDS Cycma_4630 NC_015914.1 5596543 5597835 D PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: mtt:Ftrac_0078 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; histidinol dehydrogenase 5596543..5597835 Cyclobacterium marinum DSM 745 11038382 YP_004776548.1 CDS Cycma_4631 NC_015914.1 5597839 5598909 D PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839:IPR005861; KEGG: dfe:Dfer_1138 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 5597839..5598909 Cyclobacterium marinum DSM 745 11038383 YP_004776549.1 CDS Cycma_4632 NC_015914.1 5598922 5600022 D PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase domain; histidinol-phosphatase; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR005954:IPR006543; KEGG: lby:Lbys_0035 imidazoleglycerol-phosphate dehydratase; histidinol-phosphate phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; imidazoleglycerol-phosphate dehydratase 5598922..5600022 Cyclobacterium marinum DSM 745 11038384 YP_004776550.1 CDS Cycma_4633 NC_015914.1 5600232 5601584 R PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329 transposase; SPTR: transposase; transposase complement(5600232..5601584) Cyclobacterium marinum DSM 745 11038385 YP_004776551.1 CDS Cycma_4634 NC_015914.1 5601817 5605254 R PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR004155:IPR013427; KEGG: sli:Slin_6210 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat; SPTR: Heme-binding protein; TIGRFAM: haem-binding region; heme-binding protein complement(5601817..5605254) Cyclobacterium marinum DSM 745 11038386 YP_004776552.1 CDS Cycma_4635 NC_015914.1 5605305 5608727 R PFAM: HEAT repeat; TIGRFAM: heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR013427; KEGG: sli:Slin_6210 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Heme-binding domain-containing protein; TIGRFAM: haem-binding region; heme-binding protein complement(5605305..5608727) Cyclobacterium marinum DSM 745 11038387 YP_004776553.1 CDS Cycma_4636 NC_015914.1 5608943 5610325 R PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: N-acylglucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; SPTR: N-acylglucosamine 2-epimerase superfamily; N-acylglucosamine 2-epimerase complement(5608943..5610325) Cyclobacterium marinum DSM 745 11038388 YP_004776554.1 CDS Cycma_4637 NC_015914.1 5610557 5610913 D PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: dfe:Dfer_3380 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; CopY family transcriptional repressor 5610557..5610913 Cyclobacterium marinum DSM 745 11038389 YP_004776555.1 CDS Cycma_4638 NC_015914.1 5610917 5612263 D PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: cat:CA2559_07981 TonB; PFAM: Peptidase M56, BlaR1; SPTR: uncharacterized protein; peptidase M56 BlaR1 5610917..5612263 Cyclobacterium marinum DSM 745 11038390 YP_004776556.1 CDS Cycma_4639 NC_015914.1 5612440 5613729 D PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; InterPro IPR002305:IPR002307; KEGG: mtt:Ftrac_0320 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; tyrosyl-tRNA synthetase 5612440..5613729 Cyclobacterium marinum DSM 745 11038391 YP_004776557.1 CDS Cycma_4640 NC_015914.1 5613773 5614471 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: bcy:Bcer98_3198 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein, TetR; TetR family transcriptional regulator 5613773..5614471 Cyclobacterium marinum DSM 745 11038392 YP_004776558.1 CDS Cycma_4641 NC_015914.1 5614573 5614788 D hypothetical protein 5614573..5614788 Cyclobacterium marinum DSM 745 11038393 YP_004776559.1 CDS Cycma_4642 NC_015914.1 5615054 5615821 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: carbonyl reductase (NADPH); PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 5615054..5615821 Cyclobacterium marinum DSM 745 11038394 YP_004776560.1 CDS Cycma_4643 NC_015914.1 5616219 5617172 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: mtt:Ftrac_2469 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; TIGRFAM: Ribonuclease BN; ribonuclease BN complement(5616219..5617172) Cyclobacterium marinum DSM 745 11038395 YP_004776561.1 CDS Cycma_4644 NC_015914.1 5617601 5618158 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mtt:Ftrac_0161 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase; phospholipid/glycerol acyltransferase complement(5617601..5618158) Cyclobacterium marinum DSM 745 11038396 YP_004776562.1 CDS Cycma_4645 NC_015914.1 5618162 5618959 R PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: psn:Pedsa_2501 patatin; PFAM: Patatin; SPTR: Phospholipase; manually curated; patatin complement(5618162..5618959) Cyclobacterium marinum DSM 745 11038397 YP_004776563.1 CDS Cycma_4646 NC_015914.1 5619021 5619968 R PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR020582:IPR001095; KEGG: mtt:Ftrac_0182 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha complement(5619021..5619968) Cyclobacterium marinum DSM 745 11038398 YP_004776564.1 CDS Cycma_4647 NC_015914.1 5620057 5620710 R PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: phe:Phep_3012 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system; ABC transporter complement(5620057..5620710) Cyclobacterium marinum DSM 745 11038399 YP_004776565.1 CDS Cycma_4648 NC_015914.1 5620963 5622177 D PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; InterPro IPR013650:IPR005811:IPR005809; KEGG: mtt:Ftrac_0713 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase (ADP-forming) subunit beta 5620963..5622177 Cyclobacterium marinum DSM 745 11038400 YP_004776566.1 CDS Cycma_4649 NC_015914.1 5622741 5623160 R PFAM: Transposase; SPTR: uncharacterized protein; hypothetical protein complement(5622741..5623160) Cyclobacterium marinum DSM 745 11038402 YP_004776567.1 CDS Cycma_4650 NC_015914.1 5623695 5626133 D PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; InterPro IPR008756; KEGG: TonB family protein; PFAM: Peptidase M56, BlaR1; SPTR: uncharacterized protein; peptidase M56 BlaR1 5623695..5626133 Cyclobacterium marinum DSM 745 11038403 YP_004776568.1 CDS Cycma_4651 NC_015914.1 5626255 5627463 D KEGG: dfe:Dfer_3033 acetyl xylan esterase; SPTR: acetyl xylan esterase domain protein; acetyl xylan esterase 5626255..5627463 Cyclobacterium marinum DSM 745 11038404 YP_004776569.1 CDS Cycma_4652 NC_015914.1 5627456 5628589 D PFAM: D-mannonate dehydratase (UxuA); COGs: COG1312 D-mannonate dehydratase; InterPro IPR004628; KEGG: sli:Slin_3895 mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase; mannonate dehydratase 5627456..5628589 Cyclobacterium marinum DSM 745 11038405 YP_004776570.1 CDS Cycma_4653 NC_015914.1 5628759 5630339 D PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_1770 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5628759..5630339 Cyclobacterium marinum DSM 745 11038406 YP_004776571.1 CDS Cycma_4654 NC_015914.1 5630354 5630809 D PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: cly:Celly_1756 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; hypothetical protein 5630354..5630809 Cyclobacterium marinum DSM 745 11038407 YP_004776572.1 CDS Cycma_4655 NC_015914.1 5630861 5631865 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR020829:IPR006424; KEGG: ttu:TERTU_2710 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I complement(5630861..5631865) Cyclobacterium marinum DSM 745 11038408 YP_004776573.1 CDS Cycma_4656 NC_015914.1 5631890 5632036 R hypothetical protein complement(5631890..5632036) Cyclobacterium marinum DSM 745 11038409 YP_004776574.1 CDS Cycma_4657 NC_015914.1 5632138 5633049 D PFAM: Sodium Bile acid symporter family; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: cao:Celal_0356 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid transporter family protein; bile acid:sodium symporter 5632138..5633049 Cyclobacterium marinum DSM 745 11038410 YP_004776575.1 CDS Cycma_4658 NC_015914.1 5633030 5634049 D PFAM: Acyltransferase; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: cao:Celal_0355 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: acyltransferase; phospholipid/glycerol acyltransferase 5633030..5634049 Cyclobacterium marinum DSM 745 11038411 YP_004776576.1 CDS Cycma_4659 NC_015914.1 5634351 5634983 D PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: chu:CHU_0303 carbonate dehydratase; PFAM: Carbonic anhydrase; SPTR: Carbonic anhydrase; carbonic anhydrase 5634351..5634983 Cyclobacterium marinum DSM 745 11038412 YP_004776577.1 CDS Cycma_4660 NC_015914.1 5635075 5635485 R hypothetical protein complement(5635075..5635485) Cyclobacterium marinum DSM 745 11038413 YP_004776578.1 CDS Cycma_4661 NC_015914.1 5635933 5637453 D PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: mtt:Ftrac_1659 gh3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter 5635933..5637453 Cyclobacterium marinum DSM 745 11038414 YP_004776579.1 CDS Cycma_4662 NC_015914.1 5637667 5638935 D PFAM: Bacterial protein of unknown function (DUF894); InterPro IPR011701; KEGG: cyc:PCC7424_2024 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein 5637667..5638935 Cyclobacterium marinum DSM 745 11038415 YP_004776580.1 CDS Cycma_4663 NC_015914.1 5638932 5639717 D KEGG: zpr:ZPR_4604 hypothetical protein; SPTR: Membrane protein; hypothetical protein 5638932..5639717 Cyclobacterium marinum DSM 745 11038416 YP_004776581.1 CDS Cycma_4664 NC_015914.1 5639750 5640796 R KEGG: amr:AM1_0870 hypothetical protein; SPTR: Lipoprotein; hypothetical protein complement(5639750..5640796) Cyclobacterium marinum DSM 745 11038417 YP_004776582.1 CDS Cycma_4665 NC_015914.1 5640786 5642264 R PFAM: BCCT family transporter; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: cao:Celal_0592 BCCT transporter; PFAM: BCCT transporter; SPTR: BCCT transporter; BCCT transporter complement(5640786..5642264) Cyclobacterium marinum DSM 745 11038418 YP_004776583.1 CDS Cycma_4666 NC_015914.1 5643341 5643973 D KEGG: fba:FIC_00796 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5643341..5643973 Cyclobacterium marinum DSM 745 11038419 YP_004776584.1 CDS Cycma_4667 NC_015914.1 5645189 5646775 R PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: cpi:Cpin_6279 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: uncharacterized protein; hypothetical protein complement(5645189..5646775) Cyclobacterium marinum DSM 745 11038420 YP_004776585.1 CDS Cycma_4668 NC_015914.1 5646811 5648679 R PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: mtt:Ftrac_1802 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: uncharacterized protein; hypothetical protein complement(5646811..5648679) Cyclobacterium marinum DSM 745 11038421 YP_004776586.1 CDS Cycma_4669 NC_015914.1 5648837 5649922 R KEGG: cao:Celal_1798 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5648837..5649922) Cyclobacterium marinum DSM 745 11038422 YP_004776587.1 CDS Cycma_4670 NC_015914.1 5649946 5651487 R PFAM: SusD family; InterPro IPR012944; KEGG: cly:Celly_1278 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain-containing protein; RagB/SusD domain-containing protein complement(5649946..5651487) Cyclobacterium marinum DSM 745 11038423 YP_004776588.1 CDS Cycma_4671 NC_015914.1 5651501 5654590 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cly:Celly_1277 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(5651501..5654590) Cyclobacterium marinum DSM 745 11038424 YP_004776589.1 CDS Cycma_4672 NC_015914.1 5655063 5656952 R PFAM: 7TM diverse intracellular signalling; 7TMR-DISM extracellular 2; InterPro IPR011622:IPR011623; KEGG: mtt:Ftrac_1806 diverse 7tm receptor transmembrane region; PFAM: Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; SPTR: Diverse 7TM receptor transmembrane region; hypothetical protein complement(5655063..5656952) Cyclobacterium marinum DSM 745 11038425 YP_004776590.1 CDS Cycma_4673 NC_015914.1 5657436 5658863 R KEGG: dfe:Dfer_2260 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5657436..5658863) Cyclobacterium marinum DSM 745 11038426 YP_004776591.1 CDS Cycma_4674 NC_015914.1 5659161 5659541 R PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: zpr:ZPR_2263 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver domain-containing protein; response regulator receiver protein complement(5659161..5659541) Cyclobacterium marinum DSM 745 11038427 YP_004776592.1 CDS Cycma_4675 NC_015914.1 5659620 5659730 R hypothetical protein complement(5659620..5659730) Cyclobacterium marinum DSM 745 11038428 YP_004776593.1 CDS Cycma_4676 NC_015914.1 5660210 5661625 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; InterPro IPR006311; KEGG: sli:Slin_5368 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5660210..5661625) Cyclobacterium marinum DSM 745 11038429 YP_004776594.1 CDS Cycma_4677 NC_015914.1 5661635 5664007 R InterPro IPR003088; KEGG: fbc:FB2170_05305 large, multifunctional secreted protein; PFAM: Cytochrome c, class I; SPTR: large, multifunctional secreted protein; cytochrome c class I complement(5661635..5664007) Cyclobacterium marinum DSM 745 11038430 YP_004776595.1 CDS Cycma_4678 NC_015914.1 5664017 5665462 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_1780 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase complement(5664017..5665462) Cyclobacterium marinum DSM 745 11038431 YP_004776596.1 CDS Cycma_4679 NC_015914.1 5665462 5667012 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1706 sulfatase; PFAM: Sulfatase; SPTR: Heparan N-sulfatase; sulfatase complement(5665462..5667012) Cyclobacterium marinum DSM 745 11038432 YP_004776597.1 CDS Cycma_4680 NC_015914.1 5667050 5668165 R PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: phe:Phep_0378 non-specific serine/threonine protein kinase; PFAM: Sulphatase-modifying factor; SPTR: Non-specific serine/threonine protein kinase; sulfatase-modifying factor protein complement(5667050..5668165) Cyclobacterium marinum DSM 745 11038433 YP_004776598.1 CDS Cycma_4681 NC_015914.1 5668295 5670190 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03330 sulfatase AtsG; PFAM: Sulfatase; SPTR: Probable sulfatase atsG; sulfatase complement(5668295..5670190) Cyclobacterium marinum DSM 745 11038434 YP_004776599.1 CDS Cycma_4682 NC_015914.1 5670198 5671919 R KEGG: dfe:Dfer_2566 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5670198..5671919) Cyclobacterium marinum DSM 745 11038435 YP_004776600.1 CDS Cycma_4683 NC_015914.1 5672030 5674228 R PFAM: Radical SAM superfamily; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: fps:FP1407 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; radical SAM domain-containing protein complement(5672030..5674228) Cyclobacterium marinum DSM 745 11038436 YP_004776601.1 CDS Cycma_4684 NC_015914.1 5674271 5676964 R KEGG: mtt:Ftrac_1820 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5674271..5676964) Cyclobacterium marinum DSM 745 11038437 YP_004776602.1 CDS Cycma_4685 NC_015914.1 5677057 5678598 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02130 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A; sulfatase complement(5677057..5678598) Cyclobacterium marinum DSM 745 11038438 YP_004776603.1 CDS Cycma_4686 NC_015914.1 5678937 5680283 D PFAM: Glycosyl hydrolase 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: ote:Oter_3704 glycoside hydrolase; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Glycoside hydrolase 10; glycoside hydrolase 5678937..5680283 Cyclobacterium marinum DSM 745 11038439 YP_004776604.1 CDS Cycma_4687 NC_015914.1 5680293 5681861 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB5195 N-acetylgalactosamine 6-sulfatase (GALNS); PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase (GALNS); sulfatase complement(5680293..5681861) Cyclobacterium marinum DSM 745 11038440 YP_004776605.1 CDS Cycma_4688 NC_015914.1 5681865 5683625 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1389 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5681865..5683625) Cyclobacterium marinum DSM 745 11038441 YP_004776606.1 CDS Cycma_4689 NC_015914.1 5683656 5686838 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1390 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor complement(5683656..5686838) Cyclobacterium marinum DSM 745 11038442 YP_004776607.1 CDS Cycma_4690 NC_015914.1 5687541 5689007 R PFAM: Sulfatase; TIGRFAM: choline-sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01941 iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase; sulfatase complement(5687541..5689007) Cyclobacterium marinum DSM 745 11038443 YP_004776608.1 CDS Cycma_4691 NC_015914.1 5689017 5690450 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2085 N-acetylgalactosamine-4-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfate sulfatase (GALNS); sulfatase complement(5689017..5690450) Cyclobacterium marinum DSM 745 11038444 YP_004776609.1 CDS Cycma_4692 NC_015914.1 5690729 5692312 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4497 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5690729..5692312) Cyclobacterium marinum DSM 745 11038445 YP_004776610.1 CDS Cycma_4693 NC_015914.1 5692331 5695693 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6286 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(5692331..5695693) Cyclobacterium marinum DSM 745 11038446 YP_004776611.1 CDS Cycma_4694 NC_015914.1 5695796 5696782 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_3803 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR complement(5695796..5696782) Cyclobacterium marinum DSM 745 11038447 YP_004776612.1 CDS Cycma_4695 NC_015914.1 5696895 5697482 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: bfs:BF4271 ECF-type RNA polymerase; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(5696895..5697482) Cyclobacterium marinum DSM 745 11038448 YP_004776613.1 CDS Cycma_4696 NC_015914.1 5697560 5699023 R PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; InterPro IPR018946; KEGG: pbs:Plabr_4307 alkaline phosphatase D; PFAM: Alkaline phosphatase D-related; SPTR: Probable alkaline phosphatase D; alkaline phosphatase complement(5697560..5699023) Cyclobacterium marinum DSM 745 11038449 YP_004776614.1 CDS Cycma_4697 NC_015914.1 5699553 5701190 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1498 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5699553..5701190) Cyclobacterium marinum DSM 745 11038450 YP_004776615.1 CDS Cycma_4698 NC_015914.1 5701203 5704244 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(5701203..5704244) Cyclobacterium marinum DSM 745 11038451 YP_004776616.1 CDS Cycma_4699 NC_015914.1 5704564 5706093 R PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: rba:RB88 alkaline phosphatase D; SPTR: Probable alkaline phosphatase D [Precursor]; hypothetical protein complement(5704564..5706093) Cyclobacterium marinum DSM 745 11038452 YP_004776617.1 CDS Cycma_4700 NC_015914.1 5706115 5707596 R PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; InterPro IPR018946; KEGG: pbs:Plabr_4307 alkaline phosphatase D; PFAM: Alkaline phosphatase D-related; SPTR: Probable alkaline phosphatase D; alkaline phosphatase complement(5706115..5707596) Cyclobacterium marinum DSM 745 11038453 YP_004776618.1 CDS Cycma_4701 NC_015914.1 5707896 5709626 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2218 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein complement(5707896..5709626) Cyclobacterium marinum DSM 745 11038454 YP_004776619.1 CDS Cycma_4702 NC_015914.1 5709626 5712721 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2262 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug complement(5709626..5712721) Cyclobacterium marinum DSM 745 11038455 YP_004776620.1 CDS Cycma_4703 NC_015914.1 5713465 5715462 R PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_0908 hypothetical protein; PFAM: RagB/SusD; SPTR: uncharacterized protein; RagB/SusD domain-containing protein complement(5713465..5715462) Cyclobacterium marinum DSM 745 11038456 YP_004776621.1 CDS Cycma_4704 NC_015914.1 5715475 5718984 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: bfr:BF4448 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR: outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug complement(5715475..5718984) Cyclobacterium marinum DSM 745 11038457 YP_004776622.1 CDS Cycma_4705 NC_015914.1 5719121 5720089 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_0626 anti-sigma factor; PFAM: FecR protein; SPTR: uncharacterized protein; anti-FecI sigma factor FecR complement(5719121..5720089) Cyclobacterium marinum DSM 745 11038458 YP_004776623.1 CDS Cycma_4706 NC_015914.1 5720251 5720817 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: zpr:ZPR_0255 ECF-type RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(5720251..5720817) Cyclobacterium marinum DSM 745 11038459 YP_004776624.1 CDS Cycma_4707 NC_015914.1 5721126 5722040 R PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dbr:Deba_3117 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(5721126..5722040) Cyclobacterium marinum DSM 745 11038460 YP_004776625.1 CDS Cycma_4708 NC_015914.1 5722439 5723593 R PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: shg:Sph21_0576 mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase 2; TIGRFAM: Mannonate dehydratase; mannonate dehydratase complement(5722439..5723593) Cyclobacterium marinum DSM 745 11038461 YP_004776626.1 CDS Cycma_4709 NC_015914.1 5723613 5725034 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: dfe:Dfer_4303 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(5723613..5725034) Cyclobacterium marinum DSM 745 11038462 YP_004776627.1 CDS Cycma_4710 NC_015914.1 5725091 5725963 R PFAM: Trehalose utilisation; KEGG: sli:Slin_0069 Crp/FNR family transcriptional regulator; SPTR: Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(5725091..5725963) Cyclobacterium marinum DSM 745 11038463 YP_004776628.1 CDS Cycma_4711 NC_015914.1 5726001 5727248 R KEGG: shg:Sph21_0631 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5726001..5727248) Cyclobacterium marinum DSM 745 11038464 YP_004776629.1 CDS Cycma_4712 NC_015914.1 5727616 5728638 D PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: sli:Slin_0352 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; LacI family transcriptional regulator 5727616..5728638 Cyclobacterium marinum DSM 745 11038465 YP_004776630.1 CDS Cycma_4713 NC_015914.1 5728695 5731478 R PFAM: Prolyl oligopeptidase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR001375; KEGG: sli:Slin_0766 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Probable acylaminoacyl-peptidase; peptidase S9 prolyl oligopeptidase active site domain-containing protein complement(5728695..5731478) Cyclobacterium marinum DSM 745 11038466 YP_004776631.1 CDS Cycma_4714 NC_015914.1 5731895 5732368 D PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: sli:Slin_2721 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Regulatory protein AsnC; AsnC family transcriptional regulator 5731895..5732368 Cyclobacterium marinum DSM 745 11038467 YP_004776632.1 CDS Cycma_4715 NC_015914.1 5732622 5734067 D PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR010231; KEGG: mtt:Ftrac_0906 iron-regulated ABC transporter membrane component sufb; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; FeS assembly protein SufB 5732622..5734067 Cyclobacterium marinum DSM 745 11038468 YP_004776633.1 CDS Cycma_4716 NC_015914.1 5734080 5734841 D PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439:IPR003593:IPR010230; KEGG: chu:CHU_0977 iron-regulated ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; FeS assembly ATPase SufC 5734080..5734841 Cyclobacterium marinum DSM 745 11038469 YP_004776634.1 CDS Cycma_4717 NC_015914.1 5734867 5736174 D PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR011542; KEGG: mtt:Ftrac_0909 fes assembly protein sufd; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; FeS assembly protein SufD 5734867..5736174 Cyclobacterium marinum DSM 745 11038470 YP_004776635.1 CDS Cycma_4718 NC_015914.1 5736149 5737405 D PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192:IPR010970; KEGG: dfe:Dfer_5780 cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; SufS subfamily cysteine desulfurase 5736149..5737405 Cyclobacterium marinum DSM 745 11038471 YP_004776636.1 CDS Cycma_4719 NC_015914.1 5737405 5737836 D PFAM: Fe-S metabolism associated domain; COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: mtt:Ftrac_0911 cysteine desulfuration protein SufE; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism protein, SufE family; Fe-S metabolism associated SufE 5737405..5737836 Cyclobacterium marinum DSM 745 11038472 YP_004776637.1 CDS Cycma_4720 NC_015914.1 5737844 5738179 D PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: mtt:Ftrac_0912 fes assembly suf system protein; PFAM: Protein of unknown function DUF59; SPTR: Metal-sulfur cluster biosynthetic enzyme; hypothetical protein 5737844..5738179 Cyclobacterium marinum DSM 745 11038473 YP_004776638.1 CDS Cycma_4721 NC_015914.1 5738203 5738619 D PFAM: Protein of unknown function (DUF1094); InterPro IPR009474; KEGG: mtt:Ftrac_0913 hypothetical protein; PFAM: Uncharacterised protein family UPF0403; SPTR: uncharacterized protein; hypothetical protein 5738203..5738619 Cyclobacterium marinum DSM 745 11038474 YP_004776639.1 CDS Cycma_4722 NC_015914.1 5738915 5740201 D PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); COGs: COG0372 Citrate synthase; InterPro IPR002020:IPR010953; KEGG: mtt:Ftrac_0875 citrate synthase I; PFAM: Citrate synthase-like; SPTR: Citrate synthase; TIGRFAM: Citrate synthase, type II; citrate synthase I 5738915..5740201 Cyclobacterium marinum DSM 745 11038475 YP_004776640.1 CDS Cycma_4723 NC_015914.1 5740463 5742160 D PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR005580:IPR014001; KEGG: dfe:Dfer_0202 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH family; DEAD/DEAH box helicase 5740463..5742160 Cyclobacterium marinum DSM 745 11038476 YP_004776641.1 CDS Cycma_4724 NC_015914.1 5742441 5743079 D KEGG: rbi:RB2501_12097 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5742441..5743079 Cyclobacterium marinum DSM 745 11038477 YP_004776642.1 CDS Cycma_4725 NC_015914.1 5743118 5744047 R PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG1893 Ketopantoate reductase; InterPro IPR013332:IPR013752; KEGG: fps:FP1582 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; SPTR: 2-dehydropantoate 2-reductase; ketopantoate reductase ApbA/PanE domain-containing protein complement(5743118..5744047) Cyclobacterium marinum DSM 745 11038478 YP_004776643.1 CDS Cycma_4726 NC_015914.1 5744236 5744943 D PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: geo:Geob_2035 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; type 11 methyltransferase 5744236..5744943 Cyclobacterium marinum DSM 745 11038479 YP_004776644.1 CDS Cycma_4727 NC_015914.1 5745237 5746079 D hypothetical protein 5745237..5746079 Cyclobacterium marinum DSM 745 11038480 YP_004776645.1 CDS Cycma_4728 NC_015914.1 5746076 5746486 D hypothetical protein 5746076..5746486 Cyclobacterium marinum DSM 745 11038481 YP_004776646.1 CDS Cycma_4729 NC_015914.1 5746489 5746650 D hypothetical protein 5746489..5746650 Cyclobacterium marinum DSM 745 11038482 YP_004776647.1 CDS Cycma_4730 NC_015914.1 5746828 5748297 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: gfo:GFO_1545 oxidoreductase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; oxidoreductase domain-containing protein 5746828..5748297 Cyclobacterium marinum DSM 745 11038483 YP_004776648.1 CDS Cycma_4731 NC_015914.1 5748594 5751026 R PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013655:IPR003018:IPR013656:IPR003661:IPR 003594:IPR000014:IPR001610; KEGG: mtt:Ftrac_0408 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold-3; GAF; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; manually curated; multi-sensor signal transduction histidine kinase complement(5748594..5751026) Cyclobacterium marinum DSM 745 11038484 YP_004776649.1 CDS Cycma_4732 NC_015914.1 5751100 5756244 R PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterProIPR013655:IPR013767:IPR003018:IPR000014:IPR 001610; KEGG: mtt:Ftrac_2274 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAC motif; PAS; GAF; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor protein complement(5751100..5756244) Cyclobacterium marinum DSM 745 11038485 YP_004776650.1 CDS Cycma_4733 NC_015914.1 5756725 5757756 R PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: plm:Plim_2198 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Dehydrogenase; oxidoreductase domain-containing protein complement(5756725..5757756) Cyclobacterium marinum DSM 745 11038486 YP_004776651.1 CDS Cycma_4734 NC_015914.1 5757772 5758773 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: oih:OB3261 oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein complement(5757772..5758773) Cyclobacterium marinum DSM 745 11038487 YP_004776652.1 CDS Cycma_4735 NC_015914.1 5759374 5760651 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: tsa:AciPR4_0496 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(5759374..5760651) Cyclobacterium marinum DSM 745 11038488 YP_004776653.1 CDS Cycma_4737 NC_015914.1 5761164 5765102 D PFAM: Heparinase II/III-like protein; InterPro IPR012480:IPR006626; KEGG: psn:Pedsa_1818 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: uncharacterized protein; heparinase II/III family protein 5761164..5765102 Cyclobacterium marinum DSM 745 11038490 YP_004776654.1 CDS Cycma_4738 NC_015914.1 5765380 5766993 R PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein complement(5765380..5766993) Cyclobacterium marinum DSM 745 11038491 YP_004776655.1 CDS Cycma_4739 NC_015914.1 5767013 5770264 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(5767013..5770264) Cyclobacterium marinum DSM 745 11038492 YP_004776656.1 CDS Cycma_4740 NC_015914.1 5770345 5771337 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cly:Celly_2996 anti-FecI sigma factor FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR complement(5770345..5771337) Cyclobacterium marinum DSM 745 11038493 YP_004776657.1 CDS Cycma_4741 NC_015914.1 5771493 5772032 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: phe:Phep_1502 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(5771493..5772032) Cyclobacterium marinum DSM 745 11038494 YP_004776658.1 CDS Cycma_4742 NC_015914.1 5772515 5773336 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_2992 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 5772515..5773336 Cyclobacterium marinum DSM 745 11038495 YP_004776659.1 CDS Cycma_4743 NC_015914.1 5773415 5775874 D PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: cly:Celly_2848 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor plug 5773415..5775874 Cyclobacterium marinum DSM 745 11038496 YP_004776660.1 CDS Cycma_4744 NC_015914.1 5775902 5777380 R PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR004839; KEGG: shg:Sph21_1490 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; GntR family transcriptional regulator complement(5775902..5777380) Cyclobacterium marinum DSM 745 11038497 YP_004776661.1 CDS Cycma_4745 NC_015914.1 5777586 5778626 D PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005786; KEGG: lby:Lbys_1077 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; SPTR: Branched-chain amino acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase II; branched-chain amino acid aminotransferase 5777586..5778626 Cyclobacterium marinum DSM 745 11038498 YP_004776662.1 CDS Cycma_4746 NC_015914.1 5778732 5779148 R PFAM: RF-1 domain; COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: sli:Slin_6283 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Peptidyl-tRNA hydrolase domain protein; class I peptide chain release factor complement(5778732..5779148) Cyclobacterium marinum DSM 745 11038499 YP_004776663.1 CDS Cycma_4747 NC_015914.1 5779470 5779937 R KEGG: cao:Celal_1410 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5779470..5779937) Cyclobacterium marinum DSM 745 11038500 YP_004776664.1 CDS Cycma_4748 NC_015914.1 5780229 5781971 D PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR001140:IPR003439:IPR003593; KEGG: mtt:Ftrac_2492 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: Lipid A export ATP-binding/permease MsbA; ABC transporter 5780229..5781971 Cyclobacterium marinum DSM 745 11038501 YP_004776665.1 CDS Cycma_4749 NC_015914.1 5781968 5782060 R hypothetical protein complement(5781968..5782060) Cyclobacterium marinum DSM 745 11038502 YP_004776666.1 CDS Cycma_4750 NC_015914.1 5782118 5783359 R PFAM: Flavin containing amine oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937; KEGG: mtt:Ftrac_0516 amine oxidase; PFAM: Amine oxidase; SPTR: Amine oxidase, flavin-containing; amine oxidase complement(5782118..5783359) Cyclobacterium marinum DSM 745 11038503 YP_004776667.1 CDS Cycma_4751 NC_015914.1 5783385 5784737 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR014001; KEGG: psn:Pedsa_0406 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family; DEAD/DEAH box helicase complement(5783385..5784737) Cyclobacterium marinum DSM 745 11038504 YP_004776668.1 CDS Cycma_4752 NC_015914.1 5784749 5785093 R COGs: COG4270 membrane protein; KEGG: lbl:LBL_0554 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5784749..5785093) Cyclobacterium marinum DSM 745 11038505 YP_004776669.1 CDS Cycma_4753 NC_015914.1 5785421 5786203 R KEGG: aeh:Mlg_1762 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5785421..5786203) Cyclobacterium marinum DSM 745 11038506 YP_004776670.1 CDS Cycma_4754 NC_015914.1 5786250 5787554 R PFAM: ATPase associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: fjo:Fjoh_3168 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA superfamily ATPase; ATPase AAA complement(5786250..5787554) Cyclobacterium marinum DSM 745 11038507 YP_004776671.1 CDS Cycma_4755 NC_015914.1 5787580 5788458 R PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR001440:IPR019734; KEGG: dfe:Dfer_0662 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: uncharacterized protein; hypothetical protein complement(5787580..5788458) Cyclobacterium marinum DSM 745 11038508 YP_004776672.1 CDS Cycma_4756 NC_015914.1 5788468 5791935 R KEGG: dfe:Dfer_0663 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5788468..5791935) Cyclobacterium marinum DSM 745 11038509 YP_004776673.1 CDS Cycma_4757 NC_015914.1 5792000 5793847 R PFAM: peptidoglycan binding domain; InterPro IPR002477; KEGG: fjo:Fjoh_3165 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR: uncharacterized protein; peptidoglycan-binding domain 1 protein complement(5792000..5793847) Cyclobacterium marinum DSM 745 11038510 YP_004776674.1 CDS Cycma_4758 NC_015914.1 5793858 5795333 R KEGG: fjo:Fjoh_3161 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5793858..5795333) Cyclobacterium marinum DSM 745 11038511 YP_004776675.1 CDS Cycma_4759 NC_015914.1 5795597 5798233 R KEGG: fjo:Fjoh_3160 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5795597..5798233) Cyclobacterium marinum DSM 745 11038512 YP_004776676.1 CDS Cycma_4760 NC_015914.1 5798245 5800929 R KEGG: fjo:Fjoh_3159 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5798245..5800929) Cyclobacterium marinum DSM 745 11038513 YP_004776677.1 CDS Cycma_4761 NC_015914.1 5800933 5804124 R KEGG: fjo:Fjoh_3158 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5800933..5804124) Cyclobacterium marinum DSM 745 11038514 YP_004776678.1 CDS Cycma_4762 NC_015914.1 5804130 5804540 R PFAM: Gene 25-like lysozyme; COGs: COG3628 Phage baseplate assembly protein W; InterPro IPR007048; KEGG: fjo:Fjoh_3157 gpW/GP25 family protein; PFAM: GPW/gp25; SPTR: tail lysozyme; GPW/gp25 family protein complement(5804130..5804540) Cyclobacterium marinum DSM 745 11038515 YP_004776679.1 CDS Cycma_4763 NC_015914.1 5804555 5804848 R PFAM: PAAR motif; InterPro IPR008727; KEGG: fjo:Fjoh_3156 PaaR repeat-containing protein; PFAM: PAAR motif; SPTR: uncharacterized protein; PAAR repeat-containing protein complement(5804555..5804848) Cyclobacterium marinum DSM 745 11038516 YP_004776680.1 CDS Cycma_4764 NC_015914.1 5804856 5806577 R PFAM: Phage late control gene D protein (GPD); Phage-related baseplate assembly protein; TIGRFAM: Rhs element Vgr protein; COGs: COG3500 Phage protein D; InterPro IPR006533; KEGG: fjo:Fjoh_3155 rhs element Vgr protein; PFAM: Rhs element Vgr protein; SPTR: Rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; Rhs element Vgr protein complement(5804856..5806577) Cyclobacterium marinum DSM 745 11038517 YP_004776681.1 CDS Cycma_4765 NC_015914.1 5806587 5807285 R KEGG: fjo:Fjoh_3154 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5806587..5807285) Cyclobacterium marinum DSM 745 11038518 YP_004776682.1 CDS Cycma_4766 NC_015914.1 5807291 5807440 R SPTR: uncharacterized protein; hypothetical protein complement(5807291..5807440) Cyclobacterium marinum DSM 745 11038519 YP_004776683.1 CDS Cycma_4767 NC_015914.1 5807440 5807880 R PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein; InterPro IPR011747; KEGG: fjo:Fjoh_3152 phage tail protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein complement(5807440..5807880) Cyclobacterium marinum DSM 745 11038520 YP_004776684.1 CDS Cycma_4768 NC_015914.1 5807883 5808311 R PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein; InterPro IPR011747; KEGG: fjo:Fjoh_3151 phage tail protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; SPTR: Conserved hypothetical phage tail protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein; hypothetical protein complement(5807883..5808311) Cyclobacterium marinum DSM 745 11038521 YP_004776685.1 CDS Cycma_4769 NC_015914.1 5808346 5810319 R PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: fjo:Fjoh_3150 phage tail sheath protein fi-like protein; SPTR: Phage tail sheath protein FI-like protein; phage tail sheath protein fi-like protein complement(5808346..5810319) Cyclobacterium marinum DSM 745 11038522 YP_004776686.1 CDS Cycma_4770 NC_015914.1 5810331 5811188 R KEGG: fjo:Fjoh_3149 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5810331..5811188) Cyclobacterium marinum DSM 745 11038523 YP_004776687.1 CDS Cycma_4771 NC_015914.1 5811191 5811787 R KEGG: fjo:Fjoh_3148 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5811191..5811787) Cyclobacterium marinum DSM 745 11038524 YP_004776688.1 CDS Cycma_4772 NC_015914.1 5812452 5812568 D hypothetical protein 5812452..5812568 Cyclobacterium marinum DSM 745 11038525 YP_004776689.1 CDS Cycma_4773 NC_015914.1 5812611 5813195 D PFAM: Flavodoxin-like fold; COGs: COG2249 NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cat:CA2559_10213 probable NADP(H) oxidoreductase; PFAM: Flavodoxin-like fold; SPTR: Glutathione-regulated potassium-efflux system ancillary protein KefF; NAD(P)H dehydrogenase (quinone) 5812611..5813195 Cyclobacterium marinum DSM 745 11038526 YP_004776690.1 CDS Cycma_4774 NC_015914.1 5813200 5815074 D PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR003148:IPR004771; KEGG: chu:CHU_3068 potassium efflux system protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: K+/H+ exchanger; potassium efflux system protein 5813200..5815074 Cyclobacterium marinum DSM 745 11038527 YP_004776691.1 CDS Cycma_4775 NC_015914.1 5815223 5815333 R hypothetical protein complement(5815223..5815333) Cyclobacterium marinum DSM 745 11038528 YP_004776692.1 CDS Cycma_4776 NC_015914.1 5815359 5815682 R PFAM: Domain of unknown function (DUF74); COGs: COG0393 conserved hypothetical protein; HAMAP: UPF0145 protein ybjQ; InterPro IPR002765; KEGG: dtu:Dtur_0452 protein of unknown function DUF74; PFAM: Uncharacterised protein family UPF0145; SPTR: UPF0145 protein BBFL7_00698; hypothetical protein complement(5815359..5815682) Cyclobacterium marinum DSM 745 11038529 YP_004776693.1 CDS Cycma_4777 NC_015914.1 5815929 5816453 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: srm:SRM_00590 TonB protein; SPTR: TonB protein; TIGRFAM: TonB, C-terminal; TonB family protein complement(5815929..5816453) Cyclobacterium marinum DSM 745 11038530 YP_004776694.1 CDS Cycma_4778 NC_015914.1 5816955 5817824 R PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: fjo:Fjoh_0046 YdjC family protein; PFAM: YdjC-like protein; SPTR: YdjC family protein; hypothetical protein complement(5816955..5817824) Cyclobacterium marinum DSM 745 11038531 YP_004776695.1 CDS Cycma_4779 NC_015914.1 5818574 5818999 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: dfe:Dfer_5411 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: uncharacterized protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(5818574..5818999) Cyclobacterium marinum DSM 745 11038532 YP_004776696.1 CDS Cycma_4780 NC_015914.1 5819388 5820365 D PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818:IPR000005:IPR018060; KEGG: shg:Sph21_0213 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain; SPTR: Helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator 5819388..5820365 Cyclobacterium marinum DSM 745 11038533 YP_004776697.1 CDS Cycma_4781 NC_015914.1 5820764 5821984 D PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: phe:Phep_1224 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: uncharacterized protein; hypothetical protein 5820764..5821984 Cyclobacterium marinum DSM 745 11038534 YP_004776698.1 CDS Cycma_4782 NC_015914.1 5822121 5822828 D PFAM: Protein of unknown function (DUF541); COGs: COG2859 conserved hypothetical protein; InterPro IPR007497; KEGG: rbi:RB2501_03075 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: uncharacterized protein; hypothetical protein 5822121..5822828 Cyclobacterium marinum DSM 745 11038535 YP_004776699.1 CDS Cycma_4783 NC_015914.1 5822825 5824495 R KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5822825..5824495) Cyclobacterium marinum DSM 745 11038536 YP_004776700.1 CDS Cycma_4784 NC_015914.1 5824635 5824901 R PFAM: Protein of unknown function (DUF3253); hypothetical protein complement(5824635..5824901) Cyclobacterium marinum DSM 745 11038537 YP_004776701.1 CDS Cycma_4785 NC_015914.1 5824903 5825961 R PFAM: Radical SAM superfamily; COGs: COG1533 DNA repair photolyase; InterPro IPR007197:IPR006638; KEGG: shg:Sph21_1055 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM superfamily protein; radical SAM domain-containing protein complement(5824903..5825961) Cyclobacterium marinum DSM 745 11038538 YP_004776702.1 CDS Cycma_4786 NC_015914.1 5825999 5826544 R COGs: COG3963 Phospholipid N-methyltransferase; InterPro IPR013217; KEGG: cbe:Cbei_3305 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Ribosomal RNA adenine dimethylase phospholipid N-methyltransferase; type 12 methyltransferase complement(5825999..5826544) Cyclobacterium marinum DSM 745 11038539 YP_004776703.1 CDS Cycma_4787 NC_015914.1 5826814 5828496 D PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase; amidohydrolase 5826814..5828496 Cyclobacterium marinum DSM 745 11038540 YP_004776704.1 CDS Cycma_4788 NC_015914.1 5828489 5829859 D PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase; amidohydrolase 5828489..5829859 Cyclobacterium marinum DSM 745 11038541 YP_004776705.1 CDS Cycma_4789 NC_015914.1 5829968 5831200 D PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rmr:Rmar_2106 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: amidohydrolase; amidohydrolase 5829968..5831200 Cyclobacterium marinum DSM 745 11038542 YP_004776706.1 CDS Cycma_4790 NC_015914.1 5831270 5832430 D PFAM: NlpC/P60 family; Bacterial SH3 domain; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: cly:Celly_1309 NLP/P60 protein; PFAM: NLP/P60; SPTR: Pipeptidyl-peptidase VI; NLP/P60 protein 5831270..5832430 Cyclobacterium marinum DSM 745 11038543 YP_004776707.1 CDS Cycma_4791 NC_015914.1 5832438 5834543 D PFAM: PA domain; Peptidase M28; Transferrin receptor-like dimerisation domain; COGs: COG2234 aminopeptidase; InterPro IPR003137:IPR007484; KEGG: rbi:RB2501_14204 hypothetical protein; PFAM: Peptidase M28; Protease-associated PA; SPTR: Glutamate carboxypeptidase II; peptidase M28 5832438..5834543 Cyclobacterium marinum DSM 745 11038544 YP_004776708.1 CDS Cycma_4792 NC_015914.1 5834823 5836013 R PFAM: RNA methylase UPF0020; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR000241; KEGG: dfe:Dfer_0401 RNA methylase; PFAM: RNA methylase; SPTR: RNA methylase; RNA methylase complement(5834823..5836013) Cyclobacterium marinum DSM 745 11038545 YP_004776709.1 CDS Cycma_4793 NC_015914.1 5836072 5837274 R COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: Molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein BA; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(5836072..5837274) Cyclobacterium marinum DSM 745 11038546 YP_004776710.1 CDS Cycma_4794 NC_015914.1 5837234 5837719 R PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: molybdenum cofactor biosynthesis protein C; PFAM: Molybdopterin cofactor biosynthesis MoaC region; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C complement(5837234..5837719) Cyclobacterium marinum DSM 745 11038547 YP_004776711.1 CDS Cycma_4795 NC_015914.1 5837729 5838883 R PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: cpi:Cpin_0229 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase; class V aminotransferase complement(5837729..5838883) Cyclobacterium marinum DSM 745 11038548 YP_004776712.1 CDS Cycma_4796 NC_015914.1 5838906 5840711 R PFAM: Subtilase; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sru:SRU_0565 serine protease / subtilase peptidase; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Subtilisin Novo (E.C.); peptidase S8 and S53 subtilisin kexin sedolisin complement(5838906..5840711) Cyclobacterium marinum DSM 745 11038549 YP_004776713.1 CDS Cycma_4797 NC_015914.1 5841347 5842651 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277:IPR006235; KEGG: mtt:Ftrac_1143 O-acetylhomoserine sulfhydrolase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: O-acetylhomoserine (Thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 5841347..5842651 Cyclobacterium marinum DSM 745 11038550 YP_004776714.1 CDS Cycma_4798 NC_015914.1 5842662 5843717 D PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073:IPR006296; KEGG: lby:Lbys_3238 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Homoserine O-acetyltransferase; TIGRFAM: Homoserine O-acetyltransferase; homoserine O-acetyltransferase 5842662..5843717 Cyclobacterium marinum DSM 745 11038551 YP_004776715.1 CDS Cycma_4799 NC_015914.1 5843736 5844128 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mtt:Ftrac_1458 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5843736..5844128 Cyclobacterium marinum DSM 745 11038552 YP_004776716.1 CDS Cycma_4800 NC_015914.1 5844265 5845044 D PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: shg:Sph21_2903 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 5844265..5845044 Cyclobacterium marinum DSM 745 11038553 YP_004776717.1 CDS Cycma_4801 NC_015914.1 5845045 5846652 D PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; PA14 domain; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591:IPR011658; KEGG: dfe:Dfer_3093 PA14 domain protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; PA14; SMART: PA14; SPTR: uncharacterized protein; type I phosphodiesterase/nucleotide pyrophosphatase 5845045..5846652 Cyclobacterium marinum DSM 745 11038554 YP_004776718.1 CDS Cycma_4802 NC_015914.1 5846671 5847828 R PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR001608:IPR011079:IPR000821; KEGG: mtt:Ftrac_0653 alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; SPTR: Alanine racemase 1; TIGRFAM: Alanine racemase; alanine racemase complement(5846671..5847828) Cyclobacterium marinum DSM 745 11038555 YP_004776719.1 CDS Cycma_4803 NC_015914.1 5847822 5849816 R KEGG: mtt:Ftrac_0654 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5847822..5849816) Cyclobacterium marinum DSM 745 11038556 YP_004776720.1 CDS Cycma_4804 NC_015914.1 5849825 5851045 R KEGG: mtt:Ftrac_0655 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5849825..5851045) Cyclobacterium marinum DSM 745 11038557 YP_004776721.1 CDS Cycma_4805 NC_015914.1 5851604 5852293 D KEGG: phe:Phep_4210 hypothetical protein; SPTR: acetyltransferase; hypothetical protein 5851604..5852293 Cyclobacterium marinum DSM 745 11038558 YP_004776722.1 CDS Cycma_4806 NC_015914.1 5852350 5853555 D PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518; KEGG: mtt:Ftrac_1530 argininosuccinate synthase; PFAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; argininosuccinate synthase 5852350..5853555 Cyclobacterium marinum DSM 745 11038559 YP_004776723.1 CDS Cycma_4807 NC_015914.1 5853542 5854510 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; InterPro IPR000534:IPR012280:IPR000706; KEGG: mtt:Ftrac_1531 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase 1; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; N-acetyl-gamma-glutamyl-phosphate reductase 5853542..5854510 Cyclobacterium marinum DSM 745 11038560 YP_004776724.1 CDS Cycma_4808 NC_015914.1 5854563 5855708 D PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: wvi:Weevi_0301 acetylornithine transaminase; PFAM: Aminotransferase class-III; SPTR: Acetylornithine transaminase; class III aminotransferase 5854563..5855708 Cyclobacterium marinum DSM 745 11038561 YP_004776725.1 CDS Cycma_4809 NC_015914.1 5855716 5856657 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132:IPR006131; KEGG: mtt:Ftrac_1532 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; SPTR: Ornithine carbamoyltransferase; aspartate/ornithine carbamoyltransferase 5855716..5856657 Cyclobacterium marinum DSM 745 11038562 YP_004776726.1 CDS Cycma_4810 NC_015914.1 5856670 5857455 D PFAM: Amino acid kinase; TIGRFAM: acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048:IPR004662; KEGG: mtt:Ftrac_1533 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; acetylglutamate kinase 5856670..5857455 Cyclobacterium marinum DSM 745 11038563 YP_004776727.1 CDS Cycma_4811 NC_015914.1 5857497 5858582 D PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: mtt:Ftrac_1534 peptidase M20; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Acetylornithine deacetylase; peptidase M20 5857497..5858582 Cyclobacterium marinum DSM 745 11038564 YP_004776728.1 CDS Cycma_4812 NC_015914.1 5858579 5859907 D PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR000362:IPR009049; KEGG: mtt:Ftrac_1535 argininosuccinate lyase; PFAM: Fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; argininosuccinate lyase 5858579..5859907 Cyclobacterium marinum DSM 745 11038565 YP_004776729.1 CDS Cycma_4813 NC_015914.1 5859911 5860132 R hypothetical protein complement(5859911..5860132) Cyclobacterium marinum DSM 745 11038566 YP_004776730.1 CDS Cycma_4814 NC_015914.1 5860249 5861529 R PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mtt:Ftrac_1872 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein complement(5860249..5861529) Cyclobacterium marinum DSM 745 11038567 YP_004776731.1 CDS Cycma_4815 NC_015914.1 5861835 5862266 D KEGG: cao:Celal_1187 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5861835..5862266 Cyclobacterium marinum DSM 745 11038568 YP_004776732.1 CDS Cycma_4816 NC_015914.1 5862279 5862491 D COGs: COG3530 conserved hypothetical protein; KEGG: phe:Phep_0021 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5862279..5862491 Cyclobacterium marinum DSM 745 11038569 YP_004776733.1 CDS Cycma_4817 NC_015914.1 5862711 5864966 D PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_3022 TonB dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent receptor; TonB-dependent receptor plug 5862711..5864966 Cyclobacterium marinum DSM 745 11038570 YP_004776734.1 CDS Cycma_4818 NC_015914.1 5865060 5866016 D KEGG: zpr:ZPR_3020 hypothetical protein; hypothetical protein 5865060..5866016 Cyclobacterium marinum DSM 745 11038571 YP_004776735.1 CDS Cycma_4819 NC_015914.1 5866152 5866325 R hypothetical protein complement(5866152..5866325) Cyclobacterium marinum DSM 745 11038572 YP_004776736.1 CDS Cycma_4820 NC_015914.1 5866707 5867681 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: mtt:Ftrac_2346 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase zinc-binding domain protein; molecular chaperone GroES 5866707..5867681 Cyclobacterium marinum DSM 745 11038573 YP_004776737.1 CDS Cycma_4821 NC_015914.1 5867800 5868201 D PFAM: Domain of unknown function (DUF336); COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: fps:FP1758 hypothetical protein; PFAM: Protein of unknown function DUF336; SPTR: PduO protein; hypothetical protein 5867800..5868201 Cyclobacterium marinum DSM 745 11038574 YP_004776738.1 CDS Cycma_4822 NC_015914.1 5868285 5869163 R PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR013096:IPR000005:IPR018060; KEGG: sli:Slin_0508 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; Cupin 2, conserved barrel; SMART: Helix-turn-helix, AraC domain; SPTR: transcriptional activator MltR; AraC family transcriptional regulator complement(5868285..5869163) Cyclobacterium marinum DSM 745 11038575 YP_004776739.1 CDS Cycma_4823 NC_015914.1 5869317 5872814 D PFAM: Trehalose utilisation; Copper binding proteins, plastocyanin/azurin family; TIGRFAM: membrane-bound dehydrogenase domain; COGs: COG3828 conserved hypothetical protein; InterPro IPR009381:IPR000923:IPR013428; KEGG: dfe:Dfer_1437 membrane-bound dehydrogenase domain protein; PFAM: Blue (type 1) copper domain; Protein of unknown function DUF1037; SPTR: Probable secreted glycosyl hydrolase; TIGRFAM: membrane-bound dehydrogenase; membrane-bound dehydrogenase domain-containing protein 5869317..5872814 Cyclobacterium marinum DSM 745 11038576 YP_004776740.1 CDS Cycma_4824 NC_015914.1 5872836 5873696 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: aau:AAur_1891 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 5872836..5873696 Cyclobacterium marinum DSM 745 11038577 YP_004776741.1 CDS Cycma_4825 NC_015914.1 5873738 5874850 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: sli:Slin_0510 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: NADH-dependent oxidoreductase- glucose-fructose dependent oxidoreductase; oxidoreductase domain-containing protein 5873738..5874850 Cyclobacterium marinum DSM 745 11038578 YP_004776742.1 CDS Cycma_4826 NC_015914.1 5875141 5876610 D PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153:IPR006037; KEGG: cao:Celal_0277 potassium/proton antiporter, cpa1 family; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; SPTR: Sodium/hydrogen exchanger family/TrkA domain protein; sodium/hydrogen exchanger 5875141..5876610 Cyclobacterium marinum DSM 745 11038579 YP_004776743.1 CDS Cycma_4827 NC_015914.1 5877317 5879287 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR003661:IPR003594:IPR001610:IPR 000014; KEGG: nit:NAL212_1289 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; multi-sensor signal transduction histidine kinase 5877317..5879287 Cyclobacterium marinum DSM 745 11038580 YP_004776744.1 CDS Cycma_4828 NC_015914.1 5879280 5879684 D PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: cly:Celly_0215 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver; response regulator receiver protein 5879280..5879684 Cyclobacterium marinum DSM 745 11038581 YP_004776745.1 CDS Cycma_4829 NC_015914.1 5880166 5882184 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR003661:IPR003594:IPR001610:IPR 000014; KEGG: nit:NAL212_1289 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; multi-sensor signal transduction histidine kinase 5880166..5882184 Cyclobacterium marinum DSM 745 11038582 YP_004776746.1 CDS Cycma_4830 NC_015914.1 5882150 5882554 D PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: cly:Celly_0215 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver; response regulator receiver 5882150..5882554 Cyclobacterium marinum DSM 745 11038583 YP_004776747.1 CDS Cycma_4831 NC_015914.1 5882675 5884090 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_15673 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase; sulfatase complement(5882675..5884090) Cyclobacterium marinum DSM 745 11038584 YP_004776748.1 CDS Cycma_4832 NC_015914.1 5884277 5885929 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2268 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein complement(5884277..5885929) Cyclobacterium marinum DSM 745 11038585 YP_004776749.1 CDS Cycma_4833 NC_015914.1 5885948 5889391 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910:IPR000531; KEGG: dfe:Dfer_2267 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(5885948..5889391) Cyclobacterium marinum DSM 745 11038586 YP_004776750.1 CDS Cycma_4834 NC_015914.1 5889543 5890601 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_1774 anti-sigma factor; PFAM: FecR protein; SPTR: uncharacterized protein; anti-FecI sigma factor FecR complement(5889543..5890601) Cyclobacterium marinum DSM 745 11038587 YP_004776751.1 CDS Cycma_4835 NC_015914.1 5890883 5891503 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: phe:Phep_2251 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(5890883..5891503) Cyclobacterium marinum DSM 745 11038588 YP_004776752.1 CDS Cycma_4836 NC_015914.1 5891694 5893283 D PFAM: Uncharacterized ACR, YdiU/UPF0061 family; COGs: COG0397 conserved hypothetical protein; HAMAP: UPF0061 protein ydiU; InterPro IPR003846; KEGG: cly:Celly_3131 hypothetical protein; PFAM: Uncharacterised protein family UPF0061; SPTR: UPF0061 protein ydiU; hypothetical protein 5891694..5893283 Cyclobacterium marinum DSM 745 11038589 YP_004776753.1 CDS Cycma_4837 NC_015914.1 5893286 5893537 D KEGG: fbc:FB2170_01497 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5893286..5893537 Cyclobacterium marinum DSM 745 11038590 YP_004776754.1 CDS Cycma_4838 NC_015914.1 5893571 5893954 R PFAM: Protein of unknown function (DUF3703); KEGG: chu:CHU_0726 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5893571..5893954) Cyclobacterium marinum DSM 745 11038591 YP_004776755.1 CDS Cycma_4839 NC_015914.1 5894127 5895464 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2884 sulfatase; PFAM: Sulfatase; SPTR: Probable sulfatase atsG; sulfatase complement(5894127..5895464) Cyclobacterium marinum DSM 745 11038592 YP_004776756.1 CDS Cycma_4840 NC_015914.1 5895491 5896969 R PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_0688 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5895491..5896969) Cyclobacterium marinum DSM 745 11038593 YP_004776757.1 CDS Cycma_4841 NC_015914.1 5897015 5900476 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_0460 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: outer membrane protein; TonB-dependent receptor plug complement(5897015..5900476) Cyclobacterium marinum DSM 745 11038594 YP_004776758.1 CDS Cycma_4842 NC_015914.1 5900592 5901539 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_0626 anti-sigma factor; PFAM: FecR protein; SPTR: uncharacterized protein; anti-FecI sigma factor FecR complement(5900592..5901539) Cyclobacterium marinum DSM 745 11038595 YP_004776759.1 CDS Cycma_4843 NC_015914.1 5901669 5902235 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: phe:Phep_3382 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(5901669..5902235) Cyclobacterium marinum DSM 745 11038596 YP_004776760.1 CDS Cycma_4844 NC_015914.1 5902487 5903815 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: zpr:ZPR_3683 dehydrogenase and relate protein; PFAM: Oxidoreductase, N-terminal; SPTR: dehydrogenase and relate protein; oxidoreductase domain-containing protein complement(5902487..5903815) Cyclobacterium marinum DSM 745 11038597 YP_004776761.1 CDS Cycma_4845 NC_015914.1 5904116 5905117 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rba:RB4707 large multifunctional protein-glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: uncharacterized protein; hypothetical protein 5904116..5905117 Cyclobacterium marinum DSM 745 11038598 YP_004776762.1 CDS Cycma_4846 NC_015914.1 5905169 5906410 D PFAM: PepSY-associated TM helix; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: cpi:Cpin_0020 uncharacterized iron-regulated membrane protein; PFAM: PepSY-associated TM helix; SPTR: uncharacterized protein; PepSY-associated TM helix domain-containing protein 5905169..5906410 Cyclobacterium marinum DSM 745 11038599 YP_004776763.1 CDS Cycma_4847 NC_015914.1 5906852 5907193 D PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013987:IPR013988:IPR004624; KEGG: lby:Lbys_2347 alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SPTR: Alkylphosphonate utilization operon protein PhnA; TIGRFAM: PhnA protein; alkylphosphonate utilization protein PhnA 5906852..5907193 Cyclobacterium marinum DSM 745 11038600 YP_004776764.1 CDS Cycma_4848 NC_015914.1 5907707 5910151 D PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; COGs: COG1201 Lhr-like helicase; InterPro IPR011545:IPR001650:IPR013701:IPR014001; KEGG: mtt:Ftrac_0771 ATP dependent helicase, lhr family; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Helicase domain protein; DEAD/DEAH box helicase 5907707..5910151 Cyclobacterium marinum DSM 745 11038601 YP_004776765.1 CDS Cycma_4849 NC_015914.1 5910236 5911363 D PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR012938; KEGG: zpr:ZPR_1474 glucose/sorbosone dehydrogenase; SPTR: Glucose/sorbosone dehydrogenase; glucose/sorbosone dehydrogenase 5910236..5911363 Cyclobacterium marinum DSM 745 11038602 YP_004776766.1 CDS Cycma_4850 NC_015914.1 5911456 5913126 D PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR011533; KEGG: dba:Dbac_2822 choline dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; SPTR: Choline dehydrogenase; TIGRFAM: Choline dehydrogenase; choline dehydrogenase 5911456..5913126 Cyclobacterium marinum DSM 745 11038603 YP_004776767.1 CDS Cycma_4851 NC_015914.1 5913123 5914601 D PFAM: Aldehyde dehydrogenase; TIGRFAM: glycine betaine aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: drt:Dret_0129 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Betaine aldehyde dehydrogenase; aldehyde dehydrogenase 5913123..5914601 Cyclobacterium marinum DSM 745 11038604 YP_004776768.1 CDS Cycma_4852 NC_015914.1 5914659 5916122 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: bld:BLi03272 hypothetical protein; PFAM: Sodium/solute symporter; SPTR: Proline transporter; Na+/solute symporter 5914659..5916122 Cyclobacterium marinum DSM 745 11038605 YP_004776769.1 CDS Cycma_4853 NC_015914.1 5916140 5917111 D PFAM: Inosine-uridine preferring nucleoside hydrolase; InterPro IPR001910; KEGG: dfe:Dfer_1840 inosine/uridine-preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 5916140..5917111 Cyclobacterium marinum DSM 745 11038606 YP_004776770.1 CDS Cycma_4854 NC_015914.1 5917198 5918838 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: ant:Arnit_3065 thiamine pyrophosphate protein domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; SPTR: Thiamine pyrophosphate enzyme; thiamine pyrophosphate TPP-binding domain-containing protein 5917198..5918838 Cyclobacterium marinum DSM 745 11038607 YP_004776771.1 CDS Cycma_4855 NC_015914.1 5918835 5920232 D PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: abu:Abu_2148 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; aldehyde dehydrogenase 5918835..5920232 Cyclobacterium marinum DSM 745 11038608 YP_004776772.1 CDS Cycma_4856 NC_015914.1 5920532 5921128 D PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: gfo:GFO_0944 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; hypothetical protein 5920532..5921128 Cyclobacterium marinum DSM 745 11038609 YP_004776773.1 CDS Cycma_4857 NC_015914.1 5921439 5921981 D PFAM: Protein of unknown function (DUF1697); COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: mtt:Ftrac_1982 hypothetical protein; PFAM: Protein of unknown function DUF1697; SPTR: uncharacterized protein; hypothetical protein 5921439..5921981 Cyclobacterium marinum DSM 745 11038610 YP_004776774.1 CDS Cycma_4858 NC_015914.1 5922170 5922985 D PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: fjo:Fjoh_2198 alpha/beta hydrolase domain-containing protein; SPTR: Peptidase S9-like protein; alpha/beta hydrolase 5922170..5922985 Cyclobacterium marinum DSM 745 11038611 YP_004776775.1 CDS Cycma_4859 NC_015914.1 5923044 5923625 D PFAM: O-methyltransferase; COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: O-methyltransferase 3; PFAM: O-methyltransferase, family 3; SPTR: O-methyltransferase; O-methyltransferase 3 5923044..5923625 Cyclobacterium marinum DSM 745 11038612 YP_004776776.1 CDS Cycma_4860 NC_015914.1 5923763 5924221 D PFAM: Protein of unknown function (DUF1569); KEGG: psn:Pedsa_1903 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5923763..5924221 Cyclobacterium marinum DSM 745 11038613 YP_004776777.1 CDS Cycma_4861 NC_015914.1 5924372 5924494 D hypothetical protein 5924372..5924494 Cyclobacterium marinum DSM 745 11038614 YP_004776778.1 CDS Cycma_4862 NC_015914.1 5924523 5925035 D SPTR: uncharacterized protein; hypothetical protein 5924523..5925035 Cyclobacterium marinum DSM 745 11038615 YP_004776779.1 CDS Cycma_4863 NC_015914.1 5925190 5926074 R KEGG: pbs:Plabr_4764 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5925190..5926074) Cyclobacterium marinum DSM 745 11038616 YP_004776780.1 CDS Cycma_4864 NC_015914.1 5926409 5930236 D PFAM: Cytochrome c; Membrane bound L-sorbosone dehydrogenase; TIGRFAM: membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013428:IPR013427; KEGG: dfe:Dfer_0279 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; haem-binding region; membrane-bound dehydrogenase domain-containing protein 5926409..5930236 Cyclobacterium marinum DSM 745 11038617 YP_004776781.1 CDS Cycma_4865 NC_015914.1 5930233 5930859 R hypothetical protein complement(5930233..5930859) Cyclobacterium marinum DSM 745 11038618 YP_004776782.1 CDS Cycma_4866 NC_015914.1 5931210 5931914 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, SbcD/Mre11-related; COGs: COG1407 ICC-like phosphoesterase; InterPro IPR004843; KEGG: shg:Sph21_1110 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: phosphoesterase; metallophosphoesterase 5931210..5931914 Cyclobacterium marinum DSM 745 11038619 YP_004776783.1 CDS Cycma_4867 NC_015914.1 5931957 5932847 D PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: mtt:Ftrac_0776 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Cell division protein; hypothetical protein 5931957..5932847 Cyclobacterium marinum DSM 745 11038620 YP_004776784.1 CDS Cycma_4868 NC_015914.1 5932898 5933056 D PFAM: Protein of unknown function (DUF3098); KEGG: lby:Lbys_0062 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5932898..5933056 Cyclobacterium marinum DSM 745 11038621 YP_004776785.1 CDS Cycma_4869 NC_015914.1 5933063 5933857 D PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Undecaprenyl-diphosphatase; InterPro IPR003824; KEGG: fbc:FB2170_07684 bacitracin resistance protein; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; UDP-diphosphatase 5933063..5933857 Cyclobacterium marinum DSM 745 11038622 YP_004776786.1 CDS Cycma_4870 NC_015914.1 5933857 5934546 D PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: cpi:Cpin_1673 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; tRNA pseudouridine synthase B 5933857..5934546 Cyclobacterium marinum DSM 745 11038623 YP_004776787.1 CDS Cycma_4871 NC_015914.1 5934533 5935486 D PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0196 FAD synthase; InterPro IPR015864:IPR015865:IPR002606; KEGG: mtt:Ftrac_0781 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Riboflavin biosynthesis protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase; riboflavin biosynthesis protein RibF 5934533..5935486 Cyclobacterium marinum DSM 745 11038624 YP_004776788.1 CDS Cycma_4872 NC_015914.1 5935476 5936171 D PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165:IPR012792; KEGG: mtt:Ftrac_0782 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase; SPTR: 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; 3-oxoacid CoA-transferase subunit A 5935476..5936171 Cyclobacterium marinum DSM 745 11038625 YP_004776789.1 CDS Cycma_4873 NC_015914.1 5936184 5936852 D PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165:IPR012791; KEGG: mtt:Ftrac_0783 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; SPTR: 3-oxoadipate CoA-succinyl transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase subunit B 5936184..5936852 Cyclobacterium marinum DSM 745 11038626 YP_004776790.1 CDS Cycma_4874 NC_015914.1 5936910 5937251 D TIGRFAM: gliding motility-associated protein GldC; InterPro IPR019854; KEGG: mtt:Ftrac_0785 gliding motility-associated protein gldc; SPTR: Gliding motility-associated protein GldC; TIGRFAM: Gliding motility-associated protein, GldC; gliding motility-associated protein GldC 5936910..5937251 Cyclobacterium marinum DSM 745 11038627 YP_004776791.1 CDS Cycma_4875 NC_015914.1 5937677 5940568 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_3123 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 5937677..5940568 Cyclobacterium marinum DSM 745 11038628 YP_004776792.1 CDS Cycma_4876 NC_015914.1 5940581 5942047 D KEGG: cat:CA2559_04355 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5940581..5942047 Cyclobacterium marinum DSM 745 11038629 YP_004776793.1 CDS Cycma_4877 NC_015914.1 5942053 5942649 D COGs: COG2068 Uncharacterized MobA-related protein; KEGG: cpi:Cpin_4136 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5942053..5942649 Cyclobacterium marinum DSM 745 11038630 YP_004776794.1 CDS Cycma_4878 NC_015914.1 5942951 5943703 R PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: psn:Pedsa_1792 glucosamine/galactosamine-6-phosphate isomerase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine/galactosamine-6-phosphate isomerase; glucosamine/galactosamine-6-phosphate isomerase complement(5942951..5943703) Cyclobacterium marinum DSM 745 11038631 YP_004776795.1 CDS Cycma_4879 NC_015914.1 5944147 5945307 D COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: dfe:Dfer_3263 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: uncharacterized protein; hypothetical protein 5944147..5945307 Cyclobacterium marinum DSM 745 11038632 YP_004776796.1 CDS Cycma_4880 NC_015914.1 5945437 5945898 R PFAM: GAF domain; InterPro IPR003018; KEGG: npu:Npun_F1752 GAF sensor protein; PFAM: GAF; SPTR: GAF sensor protein; GAF domain-containing protein complement(5945437..5945898) Cyclobacterium marinum DSM 745 11038633 YP_004776797.1 CDS Cycma_4881 NC_015914.1 5946009 5946719 D PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: mtt:Ftrac_0464 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: RNA methyltransferase, RsmE family; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; ribosomal RNA small subunit methyltransferase E 5946009..5946719 Cyclobacterium marinum DSM 745 11038634 YP_004776798.1 CDS Cycma_4882 NC_015914.1 5946741 5947475 R PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR003329:IPR004528; KEGG: rbi:RB2501_12879 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(5946741..5947475) Cyclobacterium marinum DSM 745 11038635 YP_004776799.1 CDS Cycma_4883 NC_015914.1 5947663 5949525 D PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR000383:IPR013736:IPR005674; KEGG: gfo:GFO_2152 carboxylesterase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15; SPTR: Alpha-amino acid ester hydrolase; TIGRFAM: CocE/NonD hydrolase; hydrolase 5947663..5949525 Cyclobacterium marinum DSM 745 11038636 YP_004776800.1 CDS Cycma_4884 NC_015914.1 5949632 5950240 D PFAM: Ferritin-like domain; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: mtt:Ftrac_3766 ferritin dps family protein; PFAM: Ferritin/Dps protein; SPTR: Nonheme iron-containing ferritin; ferritin 5949632..5950240 Cyclobacterium marinum DSM 745 11038637 YP_004776801.1 CDS Cycma_4885 NC_015914.1 5950428 5951060 R PFAM: Isochorismatase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: Nicotinamidase; PFAM: Isochorismatase-like; SPTR: Pyrazinamidase/nicotinamidase; isochorismatase hydrolase complement(5950428..5951060) Cyclobacterium marinum DSM 745 11038638 YP_004776802.1 CDS Cycma_4886 NC_015914.1 5951050 5952531 R PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase; COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR015977:IPR006405; KEGG: dfe:Dfer_4911 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase complement(5951050..5952531) Cyclobacterium marinum DSM 745 11038639 YP_004776803.1 CDS Cycma_4887 NC_015914.1 5952594 5953439 R PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: mtt:Ftrac_3553 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Transporter, drug/metabolite exporter family; hypothetical protein complement(5952594..5953439) Cyclobacterium marinum DSM 745 11038640 YP_004776804.1 CDS Cycma_4888 NC_015914.1 5953571 5954014 D PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: mtt:Ftrac_1545 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Antioxidant, AhpC/Tsa family; alkyl hydroperoxide reductase 5953571..5954014 Cyclobacterium marinum DSM 745 11038641 YP_004776805.1 CDS Cycma_4889 NC_015914.1 5954089 5955432 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: zpr:ZPR_3683 dehydrogenase and relate protein; PFAM: Oxidoreductase, N-terminal; SPTR: oxidoreductase, NAD-binding Rossmann fold protein; oxidoreductase domain-containing protein complement(5954089..5955432) Cyclobacterium marinum DSM 745 11038642 YP_004776806.1 CDS Cycma_4890 NC_015914.1 5955461 5956222 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: lby:Lbys_3008 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: multi-domain protein; hypothetical protein complement(5955461..5956222) Cyclobacterium marinum DSM 745 11038643 YP_004776807.1 CDS Cycma_4891 NC_015914.1 5956488 5957669 D PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: sli:Slin_1636 aminotransferase class-III; PFAM: Aminotransferase class-III; SPTR: Acetylornithine transaminase; class III aminotransferase 5956488..5957669 Cyclobacterium marinum DSM 745 11038644 YP_004776808.1 CDS Cycma_4892 NC_015914.1 5957883 5958485 D KEGG: shg:Sph21_0035 hypothetical protein; SPTR: tRNA (Guanine-N(1)-)-methyltransferase; hypothetical protein 5957883..5958485 Cyclobacterium marinum DSM 745 11038645 YP_004776809.1 CDS Cycma_4893 NC_015914.1 5958482 5958997 D PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); COGs: COG4502 conserved hypothetical protein; InterPro IPR010708; KEGG: fjo:Fjoh_4859 5 nucleotidase, deoxy, cytosolic type C; SPTR: 5'(3')-deoxyribonucleotidase; 5' nucleotidase 5958482..5958997 Cyclobacterium marinum DSM 745 11038646 YP_004776810.1 CDS Cycma_4894 NC_015914.1 5959343 5959801 R PFAM: 'Cold-shock' DNA-binding domain; InterPro IPR002059:IPR011129; KEGG: sli:Slin_4054 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein; cold-shock protein complement(5959343..5959801) Cyclobacterium marinum DSM 745 11038647 YP_004776811.1 CDS Cycma_4895 NC_015914.1 5960314 5961597 D PFAM: Acetyl xylan esterase (AXE1); COGs: COG3458 Acetyl esterase (deacetylase); InterPro IPR008391; KEGG: sli:Slin_2229 acetyl xylan esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl xylan esterase; acetyl xylan esterase 5960314..5961597 Cyclobacterium marinum DSM 745 11038648 YP_004776812.1 CDS Cycma_4896 NC_015914.1 5961891 5963618 R InterPro IPR003953:IPR006311; KEGG: dfe:Dfer_4473 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: uncharacterized protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(5961891..5963618) Cyclobacterium marinum DSM 745 11038649 YP_004776813.1 CDS Cycma_4897 NC_015914.1 5963721 5964878 R PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: N-acylglucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; SPTR: N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase complement(5963721..5964878) Cyclobacterium marinum DSM 745 11038650 YP_004776814.1 CDS Cycma_4898 NC_015914.1 5964892 5966298 R PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; COGs: COG2814 Arabinose efflux permease; InterPro IPR005828:IPR003663; KEGG: bth:BT_0436 arabinose-proton symporter; PFAM: General substrate transporter; SPTR: Arabinose-proton symporter; TIGRFAM: Sugar/inositol transporter; sugar transporter complement(5964892..5966298) Cyclobacterium marinum DSM 745 11038651 YP_004776815.1 CDS Cycma_4899 NC_015914.1 5966342 5967445 R PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: sli:Slin_2020 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Chloromuconate cycloisomerase; mandelate racemase complement(5966342..5967445) Cyclobacterium marinum DSM 745 11038652 YP_004776816.1 CDS Cycma_4900 NC_015914.1 5967651 5968874 D PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; InterPro IPR003699; KEGG: dfe:Dfer_3300 queuosine biosynthesis protein; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2; TIGRFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 5967651..5968874 Cyclobacterium marinum DSM 745 11038653 YP_004776817.1 CDS Cycma_4901 NC_015914.1 5968925 5969785 D PFAM: esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: sli:Slin_1530 esterase; PFAM: esterase; SPTR: esterase; manually curated; esterase 5968925..5969785 Cyclobacterium marinum DSM 745 11038654 YP_004776818.1 CDS Cycma_4902 NC_015914.1 5969967 5971253 R KEGG: nve:NEMVE_v1g222496 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(5969967..5971253) Cyclobacterium marinum DSM 745 11038655 YP_004776819.1 CDS Cycma_4903 NC_015914.1 5971682 5972383 D KEGG: fjo:Fjoh_1439 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5971682..5972383 Cyclobacterium marinum DSM 745 11038656 YP_004776820.1 CDS Cycma_4904 NC_015914.1 5972380 5975142 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: sli:Slin_1227 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: Outer membrane protein; TonB-dependent receptor plug 5972380..5975142 Cyclobacterium marinum DSM 745 11038657 YP_004776821.1 CDS Cycma_4905 NC_015914.1 5975142 5976299 D KEGG: psn:Pedsa_2558 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 5975142..5976299 Cyclobacterium marinum DSM 745 11038658 YP_004776822.1 CDS Cycma_4906 NC_015914.1 5976331 5977932 D KEGG: pdi:BDI_1506 hypothetical protein; SPTR: uncharacterized protein; manually curated; hypothetical protein 5976331..5977932 Cyclobacterium marinum DSM 745 11038659 YP_004776823.1 CDS Cycma_4907 NC_015914.1 5977960 5979432 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sli:Slin_1250 sulfatase; PFAM: Sulfatase; SPTR: N-acetylglucosamine-6-sulfatase; sulfatase complement(5977960..5979432) Cyclobacterium marinum DSM 745 11038660 YP_004776824.1 CDS Cycma_4908 NC_015914.1 5979561 5980634 R KEGG: cpi:Cpin_6603 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(5979561..5980634) Cyclobacterium marinum DSM 745 11038661 YP_004776825.1 CDS Cycma_4909 NC_015914.1 5980947 5981597 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: cao:Celal_0301 lipolytic protein g-D-S-l family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family; G-D-S-L family lipolytic protein 5980947..5981597 Cyclobacterium marinum DSM 745 11038662 YP_004776826.1 CDS Cycma_4910 NC_015914.1 5982064 5983239 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: mtt:Ftrac_2987 cys/met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: O-succinylhomoserine sulfhydrylase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 5982064..5983239 Cyclobacterium marinum DSM 745 11038663 YP_004776827.1 CDS Cycma_4911 NC_015914.1 5983320 5984627 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mtt:Ftrac_1033 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: membrane fusion efflux protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(5983320..5984627) Cyclobacterium marinum DSM 745 11038664 YP_004776828.1 CDS Cycma_4912 NC_015914.1 5984640 5985980 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_1203 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: outer membrane efflux protein; outer membrane efflux protein complement(5984640..5985980) Cyclobacterium marinum DSM 745 11038665 YP_004776829.1 CDS Cycma_4913 NC_015914.1 5986220 5987017 D PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: sli:Slin_1202 aminotransferase class IV; PFAM: Aminotransferase, class IV; SPTR: 4-amino-4-deoxychorismate lyase; class IV aminotransferase 5986220..5987017 Cyclobacterium marinum DSM 745 11038666 YP_004776830.1 CDS Cycma_4914 NC_015914.1 5987049 5987843 R PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; COGs: COG0207 Thymidylate synthase; HAMAP: Thymidylate synthase; InterPro IPR000398; KEGG: thymidylate synthase; PFAM: Thymidylate synthase, C-terminal; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase, C-terminal; thymidylate synthase complement(5987049..5987843) Cyclobacterium marinum DSM 745 11038667 YP_004776831.1 CDS Cycma_4915 NC_015914.1 5987855 5988901 R PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: mtt:Ftrac_2490 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(5987855..5988901) Cyclobacterium marinum DSM 745 11038668 YP_004776832.1 CDS Cycma_4916 NC_015914.1 5989086 5991533 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: chu:CHU_0880 tyrosine-protein kinase; SPTR: tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; capsular exopolysaccharide family protein complement(5989086..5991533) Cyclobacterium marinum DSM 745 11038669 YP_004776833.1 CDS Cycma_4917 NC_015914.1 5991536 5992348 R PFAM: Polysaccharide biosynthesis/export protein; KEGG: cat:CA2559_07225 polysaccharide export protein, BexD/CtrA/VexA family protein; SPTR: Polysaccharide export protein; hypothetical protein complement(5991536..5992348) Cyclobacterium marinum DSM 745 11038670 YP_004776834.1 CDS Cycma_4918 NC_015914.1 5992432 5993589 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: wvi:Weevi_0953 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Capsular polysaccharide biosynthesis glycosyltransferase CapM; group 1 glycosyl transferase complement(5992432..5993589) Cyclobacterium marinum DSM 745 11038671 YP_004776835.1 CDS Cycma_4919 NC_015914.1 5994029 5994451 R PFAM: FabA-like domain; COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: chu:CHU_0969 3-hydroxydecanoyl-[acyl carrier protein] dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: 3-hydroxydecanoyl-[acyl carrier protein] dehydratase; 3-hydroxyacyl-ACP dehydratase complement(5994029..5994451) Cyclobacterium marinum DSM 745 11038672 YP_004776836.1 CDS Cycma_4920 NC_015914.1 5994790 5996565 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4950 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(5994790..5996565) Cyclobacterium marinum DSM 745 11038673 YP_004776837.1 CDS Cycma_4921 NC_015914.1 5996593 5999787 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4949 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(5996593..5999787) Cyclobacterium marinum DSM 745 11038674 YP_004776838.1 CDS Cycma_4922 NC_015914.1 5999891 5999998 R hypothetical protein complement(5999891..5999998) Cyclobacterium marinum DSM 745 11038675 YP_004776839.1 CDS Cycma_4923 NC_015914.1 6000416 6000517 D hypothetical protein 6000416..6000517 Cyclobacterium marinum DSM 745 11038676 YP_004776840.1 CDS Cycma_4924 NC_015914.1 6000818 6003352 D PFAM: Cytochrome c; InterPro IPR013428:IPR003088; KEGG: sli:Slin_3985 dehydrogenase; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase; membrane-bound dehydrogenase domain-containing protein 6000818..6003352 Cyclobacterium marinum DSM 745 11038677 YP_004776841.1 CDS Cycma_4925 NC_015914.1 6003358 6004449 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_3986 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2; xylose isomerase domain-containing protein 6003358..6004449 Cyclobacterium marinum DSM 745 11038678 YP_004776842.1 CDS Cycma_4926 NC_015914.1 6004460 6005242 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 6004460..6005242 Cyclobacterium marinum DSM 745 11038679 YP_004776843.1 CDS Cycma_4927 NC_015914.1 6005267 6006598 R PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: gluconate transporter; PFAM: Gluconate transporter; SPTR: Permease, GntP family; gluconate transporter complement(6005267..6006598) Cyclobacterium marinum DSM 745 11038680 YP_004776844.1 CDS Cycma_4928 NC_015914.1 6006712 6007284 R PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: sus:Acid_0985 peptidyl-prolyl cis-trans isomerase, cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(6006712..6007284) Cyclobacterium marinum DSM 745 11038681 YP_004776845.1 CDS Cycma_4929 NC_015914.1 6007559 6008749 D KEGG: hypothetical protein; hypothetical protein 6007559..6008749 Cyclobacterium marinum DSM 745 11038682 YP_004776846.1 CDS Cycma_4930 NC_015914.1 6009059 6009772 R COGs: COG2836 conserved hypothetical protein; KEGG: fjo:Fjoh_2541 hypothetical protein; SPTR: Membrane protein; hypothetical protein complement(6009059..6009772) Cyclobacterium marinum DSM 745 11038683 YP_004776847.1 CDS Cycma_4931 NC_015914.1 6009773 6010198 R PFAM: FixH; InterPro IPR008620; KEGG: lby:Lbys_2756 FixH family protein; PFAM: FixH; SPTR: uncharacterized protein; nitrogen fixation protein FixH complement(6009773..6010198) Cyclobacterium marinum DSM 745 11038684 YP_004776848.1 CDS Cycma_4932 NC_015914.1 6010220 6011635 R PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: mtt:Ftrac_1619 cytochrome c oxidase accessory protein ccog; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; cytochrome c oxidase accessory protein CcoG complement(6010220..6011635) Cyclobacterium marinum DSM 745 11038685 YP_004776849.1 CDS Cycma_4933 NC_015914.1 6011694 6012644 R PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; InterPro IPR003088; KEGG: mtt:Ftrac_1618 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase, Cbb3-type, subunit III; cytochrome c class I complement(6011694..6012644) Cyclobacterium marinum DSM 745 11038686 YP_004776850.1 CDS Cycma_4934 NC_015914.1 6012607 6012798 R PFAM: Cbb3-type cytochrome oxidase component FixQ; KEGG: mtt:Ftrac_1617 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6012607..6012798) Cyclobacterium marinum DSM 745 11038687 YP_004776851.1 CDS Cycma_4935 NC_015914.1 6012810 6014942 R PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: mtt:Ftrac_1616 cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, Cbb3-type, subunit I/II; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO; cytochrome c oxidase, cbb3-type subunit I complement(6012810..6014942) Cyclobacterium marinum DSM 745 11038688 YP_004776852.1 CDS Cycma_4936 NC_015914.1 6014944 6015126 R PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; InterPro IPR004714; KEGG: fps:FP1154 cytochrome cbb3 oxidase maturation protein CcoS; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: Cytochrome oxidase maturation protein, Cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein complement(6014944..6015126) Cyclobacterium marinum DSM 745 11038689 YP_004776853.1 CDS Cycma_4937 NC_015914.1 6015117 6017570 R PFAM: E1-E2 ATPase; metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834; KEGG: P-type HAD superfamily ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Cu(I)-translocating P-type ATPase; E1-E2 ATPase-associated domain-containing protein complement(6015117..6017570) Cyclobacterium marinum DSM 745 11038690 YP_004776854.1 CDS Cycma_4938 NC_015914.1 6017634 6018263 R SPTR: uncharacterized protein; hypothetical protein complement(6017634..6018263) Cyclobacterium marinum DSM 745 11038691 YP_004776855.1 CDS Cycma_4939 NC_015914.1 6018941 6022093 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1920 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: uncharacterized protein; TonB-dependent receptor plug 6018941..6022093 Cyclobacterium marinum DSM 745 11038692 YP_004776856.1 CDS Cycma_4940 NC_015914.1 6022112 6023938 D PFAM: SusD family; InterPro IPR012944; KEGG: gau:GAU_2998 outer membrane protein; PFAM: RagB/SusD; SPTR: outer membrane protein; RagB/SusD domain-containing protein 6022112..6023938 Cyclobacterium marinum DSM 745 11038693 YP_004776857.1 CDS Cycma_4942 NC_015914.1 6024328 6025170 R PFAM: Uncharacterized protein conserved in bacteria (DUF2236); KEGG: afr:AFE_1693 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6024328..6025170) Cyclobacterium marinum DSM 745 11038695 YP_004776858.1 CDS Cycma_4943 NC_015914.1 6025297 6025749 R KEGG: fbc:FB2170_17081 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6025297..6025749) Cyclobacterium marinum DSM 745 11038696 YP_004776859.1 CDS Cycma_4944 NC_015914.1 6025967 6026827 D PFAM: Protein of unknown function, DUF399; COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: tcx:Tcr_0011 hypothetical protein; PFAM: Protein of unknown function DUF399; SPTR: lipoprotein; hypothetical protein 6025967..6026827 Cyclobacterium marinum DSM 745 11038697 YP_004776860.1 CDS Cycma_4945 NC_015914.1 6026987 6027769 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: mtt:Ftrac_2915 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; helix-turn-helix domain-containing protein 6026987..6027769 Cyclobacterium marinum DSM 745 11038698 YP_004776861.1 CDS Cycma_4946 NC_015914.1 6027965 6028792 R PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dfe:Dfer_3215 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(6027965..6028792) Cyclobacterium marinum DSM 745 11038699 YP_004776862.1 CDS Cycma_4947 NC_015914.1 6028937 6030373 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; transposase IS4 family protein complement(6028937..6030373) Cyclobacterium marinum DSM 745 11038700 YP_004776863.1 CDS Cycma_4948 NC_015914.1 6030554 6031291 R KEGG: mtt:Ftrac_1951 epidermal growth-factor receptor (egfr) l domain; SPTR: uncharacterized protein; hypothetical protein complement(6030554..6031291) Cyclobacterium marinum DSM 745 11038701 YP_004776864.1 CDS Cycma_4949 NC_015914.1 6031404 6031769 R PFAM: Uncharacterized protein conserved in bacteria (DUF2200); COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: mtt:Ftrac_2029 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: uncharacterized protein; hypothetical protein complement(6031404..6031769) Cyclobacterium marinum DSM 745 11038702 YP_004776865.1 CDS Cycma_4950 NC_015914.1 6031867 6032448 R COGs: COG4430 conserved hypothetical protein; KEGG: hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6031867..6032448) Cyclobacterium marinum DSM 745 11038703 YP_004776866.1 CDS Cycma_4951 NC_015914.1 6032466 6033104 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: dma:DMR_45670 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Methyltransferase; type 11 methyltransferase complement(6032466..6033104) Cyclobacterium marinum DSM 745 11038704 YP_004776867.1 CDS Cycma_4952 NC_015914.1 6033662 6034060 R hypothetical protein complement(6033662..6034060) Cyclobacterium marinum DSM 745 11038705 YP_004776868.1 CDS Cycma_4953 NC_015914.1 6034382 6034837 R PFAM: Transposase IS200 like; KEGG: fjo:Fjoh_2186 transposase IS200-family protein; SPTR: Probable transposase; transposase IS200-family protein complement(6034382..6034837) Cyclobacterium marinum DSM 745 11038706 YP_004776869.1 CDS Cycma_4954 NC_015914.1 6034932 6035096 R hypothetical protein complement(6034932..6035096) Cyclobacterium marinum DSM 745 11038707 YP_004776870.1 CDS Cycma_4955 NC_015914.1 6035374 6036006 D hypothetical protein 6035374..6036006 Cyclobacterium marinum DSM 745 11038708 YP_004776871.1 CDS Cycma_4956 NC_015914.1 6036109 6036294 R hypothetical protein complement(6036109..6036294) Cyclobacterium marinum DSM 745 11038709 YP_004776872.1 CDS Cycma_4957 NC_015914.1 6036608 6039568 D PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR003141:IPR004805:IPR004013:IPR011708; KEGG: dfe:Dfer_4916 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 6036608..6039568 Cyclobacterium marinum DSM 745 11038710 YP_004776873.1 CDS Cycma_4958 NC_015914.1 6039725 6040867 D SPTR: uncharacterized protein; hypothetical protein 6039725..6040867 Cyclobacterium marinum DSM 745 11038711 YP_004776874.1 CDS Cycma_4959 NC_015914.1 6041114 6042115 D KEGG: caa:Caka_0611 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 6041114..6042115 Cyclobacterium marinum DSM 745 11038712 YP_004776875.1 CDS Cycma_4960 NC_015914.1 6042224 6043675 R PFAM: Planctomycete cytochrome C; KEGG: dfe:Dfer_3699 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6042224..6043675) Cyclobacterium marinum DSM 745 11038713 YP_004776876.1 CDS Cycma_4961 NC_015914.1 6043681 6045168 R PFAM: Protein of unknown function (DUF1501); InterPro IPR006311:IPR010869; KEGG: sli:Slin_5451 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: uncharacterized protein; hypothetical protein complement(6043681..6045168) Cyclobacterium marinum DSM 745 11038714 YP_004776877.1 CDS Cycma_4962 NC_015914.1 6045165 6047969 R PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: sli:Slin_4084 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: uncharacterized protein; hypothetical protein complement(6045165..6047969) Cyclobacterium marinum DSM 745 11038715 YP_004776878.1 CDS Cycma_4963 NC_015914.1 6048139 6048387 R hypothetical protein complement(6048139..6048387) Cyclobacterium marinum DSM 745 11038716 YP_004776879.1 CDS Cycma_4964 NC_015914.1 6048626 6049012 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: sde:Sde_0936 50S ribosomal protein L14; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(6048626..6049012) Cyclobacterium marinum DSM 745 11038717 YP_004776880.1 CDS Cycma_4965 NC_015914.1 6049506 6050510 D PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: aca:ACP_1955 oxidoreductase, Gfo/Idh/MocA family; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 6049506..6050510 Cyclobacterium marinum DSM 745 11038718 YP_004776881.1 CDS Cycma_4966 NC_015914.1 6050736 6052157 R PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cya:CYA_2510 solute/sodium symporter (SSS) family protein; PFAM: Sodium/solute symporter; SPTR: uncharacterized protein; Na+/solute symporter complement(6050736..6052157) Cyclobacterium marinum DSM 745 11038719 YP_004776882.1 CDS Cycma_4967 NC_015914.1 6052154 6052381 R hypothetical protein complement(6052154..6052381) Cyclobacterium marinum DSM 745 11038720 YP_004776883.1 CDS Cycma_4968 NC_015914.1 6052495 6053265 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_2838 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(6052495..6053265) Cyclobacterium marinum DSM 745 11038721 YP_004776884.1 CDS Cycma_4969 NC_015914.1 6053278 6054420 R PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: dfe:Dfer_4759 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(6053278..6054420) Cyclobacterium marinum DSM 745 11038722 YP_004776885.1 CDS Cycma_4970 NC_015914.1 6054433 6055263 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(6054433..6055263) Cyclobacterium marinum DSM 745 11038723 YP_004776886.1 CDS Cycma_4971 NC_015914.1 6055260 6056642 R PFAM: Glycosyl Hydrolase 88; InterPro IPR010905; KEGG: sli:Slin_2836 hypothetical protein; PFAM: Glycosyl hydrolase, family 88; SPTR: uncharacterized protein; glycoside hydrolase complement(6055260..6056642) Cyclobacterium marinum DSM 745 11038724 YP_004776887.1 CDS Cycma_4972 NC_015914.1 6056796 6057692 R PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dfe:Dfer_4762 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(6056796..6057692) Cyclobacterium marinum DSM 745 11038725 YP_004776888.1 CDS Cycma_4973 NC_015914.1 6058313 6059215 R PFAM: Protein of unknown function (DUF3078); KEGG: psn:Pedsa_3095 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6058313..6059215) Cyclobacterium marinum DSM 745 11038726 YP_004776889.1 CDS Cycma_4974 NC_015914.1 6059357 6059632 D PFAM: Domain of unknown function DUF; InterPro IPR003807; KEGG: mtt:Ftrac_3221 hypothetical protein; PFAM: Protein of unknown function DUF202; SPTR: Membrane protein; hypothetical protein 6059357..6059632 Cyclobacterium marinum DSM 745 11038727 YP_004776890.1 CDS Cycma_4975 NC_015914.1 6059712 6059921 D KEGG: shg:Sph21_3625 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 6059712..6059921 Cyclobacterium marinum DSM 745 11038728 YP_004776891.1 CDS Cycma_4976 NC_015914.1 6060211 6062328 R PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: mtt:Ftrac_0301 polyphosphate kinase; PFAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase complement(6060211..6062328) Cyclobacterium marinum DSM 745 11038729 YP_004776892.1 CDS Cycma_4977 NC_015914.1 6062445 6064406 R PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR001241:IPR011557:IPR013506:IPR 006171:IPR002288; KEGG: mtt:Ftrac_0291 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; DNA gyrase subunit B complement(6062445..6064406) Cyclobacterium marinum DSM 745 11038730 YP_004776893.1 CDS Cycma_4978 NC_015914.1 6064846 6065220 R KEGG: mtt:Ftrac_1186 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6064846..6065220) Cyclobacterium marinum DSM 745 11038731 YP_004776894.1 CDS Cycma_4979 NC_015914.1 6065260 6066834 R PFAM: FAD binding domain; FAD dependent oxidoreductase; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR013027:IPR006076; KEGG: sli:Slin_1023 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: Oxidoreductase, FAD-dependent; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(6065260..6066834) Cyclobacterium marinum DSM 745 11038732 YP_004776895.1 CDS Cycma_4980 NC_015914.1 6066838 6067809 R PFAM: Tryptophan 2,3-dioxygenase; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: cpi:Cpin_1013 tryptophan 2 3-dioxygenase (vermilion)-like protein; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Tryptophan 2,3-dioxygenase; tryptophan 23-dioxygenase complement(6066838..6067809) Cyclobacterium marinum DSM 745 11038733 YP_004776896.1 CDS Cycma_4981 NC_015914.1 6067978 6069039 R PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: mtt:Ftrac_0660 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: uncharacterized protein; hypothetical protein complement(6067978..6069039) Cyclobacterium marinum DSM 745 11038734 YP_004776897.1 CDS Cycma_4982 NC_015914.1 6069147 6070121 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR002305; KEGG: mtt:Ftrac_0658 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; SPTR: Tryptophan--tRNA ligase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 6069147..6070121 Cyclobacterium marinum DSM 745 11038735 YP_004776898.1 CDS Cycma_4983 NC_015914.1 6070312 6070734 R KEGG: mtt:Ftrac_0767 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6070312..6070734) Cyclobacterium marinum DSM 745 11038736 YP_004776899.1 CDS Cycma_4984 NC_015914.1 6070937 6072664 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845; KEGG: chu:CHU_0998 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; SPTR: Phosphoglucomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 6070937..6072664 Cyclobacterium marinum DSM 745 11038737 YP_004776900.1 CDS Cycma_4985 NC_015914.1 6072708 6072884 R hypothetical protein complement(6072708..6072884) Cyclobacterium marinum DSM 745 11038738 YP_004776901.1 CDS Cycma_4986 NC_015914.1 6072887 6073315 R PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: npu:Npun_BR144 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: uncharacterized protein; hypothetical protein complement(6072887..6073315) Cyclobacterium marinum DSM 745 11038739 YP_004776902.1 CDS Cycma_4987 NC_015914.1 6073312 6074373 R PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: mtt:Ftrac_0514 amp-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: O-succinylbenzoic acid--CoA ligase; AMP-dependent synthetase/ligase complement(6073312..6074373) Cyclobacterium marinum DSM 745 11038740 YP_004776903.1 CDS Cycma_4988 NC_015914.1 6074487 6075323 D PFAM: Enoyl-CoA hydratase/isomerase; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase); COGs: COG0447 Dihydroxynaphthoic acid synthase; InterPro IPR010198:IPR001753; KEGG: cao:Celal_4119 1,4-dihydroxy-2-naphthoate synthase; PFAM: Crotonase, core; SPTR: 1,4-Dihydroxy-2-naphthoate synthase; TIGRFAM: Naphthoate synthase; naphthoate synthase 6074487..6075323 Cyclobacterium marinum DSM 745 11038741 YP_004776904.1 CDS Cycma_4989 NC_015914.1 6075562 6077142 D PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; InterPro IPR001272; KEGG: rbi:RB2501_03670 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoenolpyruvate carboxykinase 6075562..6077142 Cyclobacterium marinum DSM 745 11038742 YP_004776905.1 CDS Cycma_4990 NC_015914.1 6077150 6078325 D KEGG: bfs:BF3837 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 6077150..6078325 Cyclobacterium marinum DSM 745 11038743 YP_004776906.1 CDS Cycma_4991 NC_015914.1 6078401 6079285 D PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: fbc:FB2170_01482 lipase esterase; SPTR: Lipase, esterase; hypothetical protein 6078401..6079285 Cyclobacterium marinum DSM 745 11038744 YP_004776907.1 CDS Cycma_4992 NC_015914.1 6079378 6079488 D hypothetical protein 6079378..6079488 Cyclobacterium marinum DSM 745 11038745 YP_004776908.1 CDS Cycma_4993 NC_015914.1 6079659 6080384 R PFAM: VIT family; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: mtt:Ftrac_3350 hypothetical protein; PFAM: Protein of unknown function DUF125, transmembrane; SPTR: Integral membrane protein; hypothetical protein complement(6079659..6080384) Cyclobacterium marinum DSM 745 11038746 YP_004776909.1 CDS Cycma_4994 NC_015914.1 6081851 6083980 R PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582:IPR002818; KEGG: cat:CA2559_11433 catalase HPII; PFAM: Catalase related subgroup; Catalase-related immune responsive; ThiJ/PfpI; SPTR: Catalase; catalase related subgroup domain-containing protein complement(6081851..6083980) Cyclobacterium marinum DSM 745 11038749 YP_004776910.1 CDS Cycma_4995 NC_015914.1 6084567 6085580 D PFAM: Eukaryotic DNA topoisomerase I, catalytic core; COGs: COG3569 Topoisomerase IB; KEGG: cao:Celal_0443 DNA topoisomerase; SPTR: DNA topoisomerase; DNA topoisomerase 6084567..6085580 Cyclobacterium marinum DSM 745 11038751 YP_004776911.1 CDS Cycma_4996 NC_015914.1 6085603 6086478 R PFAM: Protein of unknown function (DUF808); COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: cly:Celly_0859 hypothetical protein; PFAM: Protein of unknown function DUF808; SPTR: uncharacterized protein; hypothetical protein complement(6085603..6086478) Cyclobacterium marinum DSM 745 11038752 YP_004776912.1 CDS Cycma_4997 NC_015914.1 6086699 6086860 D PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: cao:Celal_1820 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: UPF0391 membrane protein ytjA; hypothetical protein 6086699..6086860 Cyclobacterium marinum DSM 745 11038753 YP_004776913.1 CDS Cycma_4998 NC_015914.1 6087207 6087728 D PFAM: Protein of unknown function (DUF421); COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: gfo:GFO_3637 hypothetical protein; PFAM: Protein of unknown function DUF421; SPTR: Membrane protein containing DUF421; hypothetical protein 6087207..6087728 Cyclobacterium marinum DSM 745 11038754 YP_004776914.1 CDS Cycma_4999 NC_015914.1 6087787 6088245 R PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; InterPro IPR011971:IPR019052; KEGG: cao:Celal_1821 hypothetical protein; PFAM: Protein of unknown function DUF2383; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; hypothetical protein complement(6087787..6088245) Cyclobacterium marinum DSM 745 11038755 YP_004776915.1 CDS Cycma_5000 NC_015914.1 6088721 6089875 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; transposase IS4 family protein complement(6088721..6089875) Cyclobacterium marinum DSM 745 11038756 YP_004776916.1 CDS Cycma_5001 NC_015914.1 6090182 6092716 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003661:IPR003594:IPR013656; KEGG: cao:Celal_3563 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase complement(6090182..6092716) Cyclobacterium marinum DSM 745 11038757 YP_004776917.1 CDS Cycma_5002 NC_015914.1 6092713 6092850 R hypothetical protein complement(6092713..6092850) Cyclobacterium marinum DSM 745 11038758 YP_004776918.1 CDS Cycma_5003 NC_015914.1 6092843 6093292 R PFAM: Response regulator receiver domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789; KEGG: cly:Celly_2475 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver; response regulator receiver protein complement(6092843..6093292) Cyclobacterium marinum DSM 745 11038759 YP_004776919.1 CDS Cycma_5004 NC_015914.1 6093606 6094109 R PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG3871 Uncharacterized stress protein (general stress protein 26); KEGG: pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; SPTR: uncharacterized protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(6093606..6094109) Cyclobacterium marinum DSM 745 11038760 YP_004776920.1 CDS Cycma_5005 NC_015914.1 6094279 6095307 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_4321 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator complement(6094279..6095307) Cyclobacterium marinum DSM 745 11038761 YP_004776921.1 CDS Cycma_5006 NC_015914.1 6095738 6096184 R PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: cly:Celly_2475 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver; response regulator receiver protein complement(6095738..6096184) Cyclobacterium marinum DSM 745 11038762 YP_004776922.1 CDS Cycma_5007 NC_015914.1 6096174 6096761 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cly:Celly_2476 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Possible ARAC-type regulatory protein; AraC family transcriptional regulator complement(6096174..6096761) Cyclobacterium marinum DSM 745 11038763 YP_004776923.1 CDS Cycma_5008 NC_015914.1 6097411 6097593 R KEGG: cly:Celly_1593 entericidin EcnAB; SPTR: Entericidin EcnAB; entericidin A/B complement(6097411..6097593) Cyclobacterium marinum DSM 745 11038764 YP_004776924.1 CDS Cycma_5009 NC_015914.1 6097867 6098022 R PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: cao:Celal_1820 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: UPF0391 membrane protein ytjA; hypothetical protein complement(6097867..6098022) Cyclobacterium marinum DSM 745 11038765 YP_004776925.1 CDS Cycma_5010 NC_015914.1 6098148 6099428 R PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: cat:CA2559_10028 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase; L-sorbosone dehydrogenase complement(6098148..6099428) Cyclobacterium marinum DSM 745 11038766 YP_004776926.1 CDS Cycma_5011 NC_015914.1 6099757 6101616 D PFAM: FAD binding domain; InterPro IPR003953; KEGG: psl:Psta_3017 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 6099757..6101616 Cyclobacterium marinum DSM 745 11038767 YP_004776927.1 CDS Cycma_5012 NC_015914.1 6101704 6103695 D PFAM: Prolyl oligopeptidase; KEGG: glycosyl hydrolase BNR repeat-containing protein; SPTR: O-antigen related protein; glycosyl hydrolase family protein 6101704..6103695 Cyclobacterium marinum DSM 745 11038768 YP_004776928.1 CDS Cycma_5013 NC_015914.1 6103931 6105025 D PFAM: Metalloenzyme superfamily; KEGG: ppn:Palpr_0233 sulfatase; SPTR: uncharacterized protein; sulfatase 6103931..6105025 Cyclobacterium marinum DSM 745 11038769 YP_004776929.1 CDS Cycma_5014 NC_015914.1 6105088 6105345 D KEGG: nwa:Nwat_2905 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 6105088..6105345 Cyclobacterium marinum DSM 745 11038770 YP_004776930.1 CDS Cycma_5015 NC_015914.1 6105581 6106480 D PFAM: Diacylglycerol kinase catalytic domain; COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: mtt:Ftrac_2154 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region; SPTR: Diacylglycerol kinase related protein; diacylglycerol kinase catalytic subunit 6105581..6106480 Cyclobacterium marinum DSM 745 11038771 YP_004776931.1 CDS Cycma_5016 NC_015914.1 6106856 6107293 D hypothetical protein 6106856..6107293 Cyclobacterium marinum DSM 745 11038772 YP_004776932.1 CDS Cycma_5017 NC_015914.1 6107421 6108506 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_0982 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 6107421..6108506 Cyclobacterium marinum DSM 745 11038773 YP_004776933.1 CDS Cycma_5018 NC_015914.1 6108532 6111759 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: hydrophobe/amphiphile efflux-1 (HAE1) family transporter; PFAM: Acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 6108532..6111759 Cyclobacterium marinum DSM 745 11038774 YP_004776934.1 CDS Cycma_5019 NC_015914.1 6111764 6113179 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: NodT family RND efflux system outer membrane lipoprotein; PFAM: Outer membrane efflux protein; SPTR: Similar to outer-membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 6111764..6113179 Cyclobacterium marinum DSM 745 11038775 YP_004776935.1 CDS Cycma_5020 NC_015914.1 6113527 6114924 R PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family; transposase IS4 family protein complement(6113527..6114924) Cyclobacterium marinum DSM 745 11038776 YP_004776936.1 CDS Cycma_5021 NC_015914.1 6114945 6116630 R KEGG: dfe:Dfer_3219 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6114945..6116630) Cyclobacterium marinum DSM 745 11038777 YP_004776937.1 CDS Cycma_5022 NC_015914.1 6116635 6120306 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6611 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(6116635..6120306) Cyclobacterium marinum DSM 745 11038778 YP_004776938.1 CDS Cycma_5023 NC_015914.1 6120450 6121445 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: sli:Slin_1219 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR complement(6120450..6121445) Cyclobacterium marinum DSM 745 11038779 YP_004776939.1 CDS Cycma_5024 NC_015914.1 6121491 6122156 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_6284 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(6121491..6122156) Cyclobacterium marinum DSM 745 11038780 YP_004776940.1 CDS Cycma_5025 NC_015914.1 6122184 6122282 R hypothetical protein complement(6122184..6122282) Cyclobacterium marinum DSM 745 11038781 YP_004776941.1 CDS Cycma_5026 NC_015914.1 6122607 6123122 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: osp:Odosp_2242 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: extracytoplasmic function alternative sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 6122607..6123122 Cyclobacterium marinum DSM 745 11038782 YP_004776942.1 CDS Cycma_5027 NC_015914.1 6123103 6123534 D hypothetical protein 6123103..6123534 Cyclobacterium marinum DSM 745 11038783 YP_004776943.1 CDS Cycma_5028 NC_015914.1 6123568 6124059 D SPTR: TonB; hypothetical protein 6123568..6124059 Cyclobacterium marinum DSM 745 11038784 YP_004776944.1 CDS Cycma_5029 NC_015914.1 6124485 6126053 D PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: wvi:Weevi_1697 glutamate synthase (NADPH); PFAM: Glutamate synthase, central-C; SPTR: Glutamate synthase (NADPH); ferredoxin-dependent glutamate synthase 6124485..6126053 Cyclobacterium marinum DSM 745 11038785 YP_004776945.1 CDS Cycma_5030 NC_015914.1 6126133 6127077 D PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sli:Slin_5717 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 6126133..6127077 Cyclobacterium marinum DSM 745 11038786 YP_004776946.1 CDS Cycma_5031 NC_015914.1 6127243 6127851 D PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3145 Alkylated DNA repair protein; InterPro IPR005123; KEGG: fjo:Fjoh_1572 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 6127243..6127851 Cyclobacterium marinum DSM 745 11038787 YP_004776947.1 CDS Cycma_5032 NC_015914.1 6127883 6128296 D PFAM: Protein of unknown function (DUF1200); InterPro IPR009589; KEGG: fbc:FB2170_04385 lipoprotein; PFAM: Protein of unknown function DUF1200; SPTR: Lipoprotein; hypothetical protein 6127883..6128296 Cyclobacterium marinum DSM 745 11038788 YP_004776948.1 CDS Cycma_5033 NC_015914.1 6128324 6128650 D PFAM: Small Multidrug Resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Small multidrug resistance protein; small multidrug resistance protein 6128324..6128650 Cyclobacterium marinum DSM 745 11038789 YP_004776949.1 CDS Cycma_5034 NC_015914.1 6128743 6129873 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003661:IPR003594; KEGG: hse:Hsero_2572 two component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: Two component sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase complement(6128743..6129873) Cyclobacterium marinum DSM 745 11038790 YP_004776950.1 CDS Cycma_5035 NC_015914.1 6129870 6130676 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rle:RL1000 hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: hydrolase; alpha/beta hydrolase complement(6129870..6130676) Cyclobacterium marinum DSM 745 11038791 YP_004776951.1 CDS Cycma_5036 NC_015914.1 6131167 6133191 R PFAM: Thi4 family; KEGG: dfe:Dfer_4710 xanthan lyase; SPTR: lipoprotein; xanthan lyase complement(6131167..6133191) Cyclobacterium marinum DSM 745 11038792 YP_004776952.1 CDS Cycma_5037 NC_015914.1 6133200 6134978 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4157 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase; sulfatase complement(6133200..6134978) Cyclobacterium marinum DSM 745 11038793 YP_004776953.1 CDS Cycma_5038 NC_015914.1 6135101 6136783 R KEGG: shg:Sph21_1277 hypothetical protein; SPTR: Probable secreted protein- xanthan lyase related; hypothetical protein complement(6135101..6136783) Cyclobacterium marinum DSM 745 11038794 YP_004776954.1 CDS Cycma_5039 NC_015914.1 6137122 6138834 R KEGG: fbc:FB2170_11111 xanthan lyase; SPTR: Probable xanthan lyase; xanthan lyase complement(6137122..6138834) Cyclobacterium marinum DSM 745 11038795 YP_004776955.1 CDS Cycma_5040 NC_015914.1 6138920 6140461 R PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_3913 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase A; sulfatase complement(6138920..6140461) Cyclobacterium marinum DSM 745 11038796 YP_004776956.1 CDS Cycma_5041 NC_015914.1 6140687 6140878 D hypothetical protein 6140687..6140878 Cyclobacterium marinum DSM 745 11038797 YP_004776957.1 CDS Cycma_5042 NC_015914.1 6140898 6142577 R PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_1880 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: outer membrane protein; RagB/SusD domain-containing protein complement(6140898..6142577) Cyclobacterium marinum DSM 745 11038798 YP_004776958.1 CDS Cycma_5043 NC_015914.1 6142591 6145917 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_0357 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-linked outer membrane receptor protein; TonB-dependent receptor plug complement(6142591..6145917) Cyclobacterium marinum DSM 745 11038799 YP_004776959.1 CDS Cycma_5044 NC_015914.1 6146009 6147001 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_3803 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: uncharacterized protein; anti-FecI sigma factor FecR complement(6146009..6147001) Cyclobacterium marinum DSM 745 11038800 YP_004776960.1 CDS Cycma_5045 NC_015914.1 6147148 6147735 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: phe:Phep_3791 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(6147148..6147735) Cyclobacterium marinum DSM 745 11038801 YP_004776961.1 CDS Cycma_5046 NC_015914.1 6147875 6148651 R PFAM: Cupin domain; InterPro IPR013096; KEGG: ote:Oter_3738 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin domain protein; cupin complement(6147875..6148651) Cyclobacterium marinum DSM 745 11038802 YP_004776962.1 CDS Cycma_5047 NC_015914.1 6148883 6150049 R PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: dfe:Dfer_0186 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase complement(6148883..6150049) Cyclobacterium marinum DSM 745 11038803 YP_004776963.1 CDS Cycma_5048 NC_015914.1 6150258 6154385 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003018:IPR003661:IPR003594:IPR 001789:IPR013655:IPR013656:IPR008207; KEGG: cpi:Cpin_5573 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; PAS fold-4; GAF; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; GAF; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; multi-sensor hybrid histidine kinase 6150258..6154385 Cyclobacterium marinum DSM 745 11038804 YP_004776964.1 CDS Cycma_5049 NC_015914.1 6154562 6155260 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: gfo:GFO_0843 two-component response transcriptional regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator protein; LytTR family two component transcriptional regulator complement(6154562..6155260) Cyclobacterium marinum DSM 745 11038805 YP_004776965.1 CDS Cycma_5050 NC_015914.1 6155310 6155972 R COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: chl:Chy400_1779 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein; hypothetical protein complement(6155310..6155972) Cyclobacterium marinum DSM 745 11038806 YP_004776966.1 CDS Cycma_5051 NC_015914.1 6156125 6156883 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_3857 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: uncharacterized protein; outer membrane efflux protein 6156125..6156883 Cyclobacterium marinum DSM 745 11038807 YP_004776967.1 CDS Cycma_5052 NC_015914.1 6156885 6159026 D PFAM: Chain length determinant protein; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: bth:BT_1164 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: uncharacterized protein; lipopolysaccharide biosynthesis protein 6156885..6159026 Cyclobacterium marinum DSM 745 11038808 YP_004776968.1 CDS Cycma_5053 NC_015914.1 6159045 6160472 D KEGG: sli:Slin_3860 O-antigen polymerase; SPTR: Membrane protein; O-antigen polymerase 6159045..6160472 Cyclobacterium marinum DSM 745 11038809 YP_004776969.1 CDS Cycma_5054 NC_015914.1 6160465 6161373 D PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cpi:Cpin_3709 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2; family 2 glycosyl transferase 6160465..6161373 Cyclobacterium marinum DSM 745 11038810 YP_004776970.1 CDS Cycma_5055 NC_015914.1 6161386 6162519 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pru:PRU_1436 group 1 family glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Probable mannosyltransferase B; group 1 glycosyl transferase 6161386..6162519 Cyclobacterium marinum DSM 745 11038811 YP_004776971.1 CDS Cycma_5056 NC_015914.1 6162516 6163850 D PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dfe:Dfer_0177 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 6162516..6163850 Cyclobacterium marinum DSM 745 11038812 YP_004776972.1 CDS Cycma_5057 NC_015914.1 6163865 6165091 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: phe:Phep_1964 cell wall biogenesis glycosyltransferase; SPTR: Glycosyltransferase probably involved in cell wall biogenesis; cell wall biosynthesis glycosyltransferase complement(6163865..6165091) Cyclobacterium marinum DSM 745 11038813 YP_004776973.1 CDS Cycma_5058 NC_015914.1 6165180 6166406 D KEGG: cts:Ctha_0382 group 1 glycosyl transferase; SPTR: Glycosyl transferase group 1; group 1 glycosyl transferase 6165180..6166406 Cyclobacterium marinum DSM 745 11038814 YP_004776974.1 CDS Cycma_5059 NC_015914.1 6166523 6167728 R PFAM: Bacterial sugar transferase; Response regulator receiver domain; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR001789:IPR003362; KEGG: dfe:Dfer_0162 sugar transferase; PFAM: Bacterial sugar transferase; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Sugar transferase; response regulator receiver protein complement(6166523..6167728) Cyclobacterium marinum DSM 745 11038815 YP_004776975.1 CDS Cycma_5060 NC_015914.1 6167721 6168128 R PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: dfe:Dfer_0161 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; response regulator receiver protein complement(6167721..6168128) Cyclobacterium marinum DSM 745 11038816 YP_004776976.1 CDS Cycma_5061 NC_015914.1 6168397 6169344 R PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: hhe:HH0647 nucleotide sugar dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(6168397..6169344) Cyclobacterium marinum DSM 745 11038817 YP_004776977.1 CDS Cycma_5062 NC_015914.1 6169521 6170312 D PFAM: NIPSNAP; InterPro IPR012577; KEGG: NIPSNAP family containing protein; PFAM: NIPSNAP; SPTR: Nipsnap superfamily protein; NIPSNAP family containing protein 6169521..6170312 Cyclobacterium marinum DSM 745 11038818 YP_004776978.1 CDS Cycma_5063 NC_015914.1 6170418 6171281 R PFAM: NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: gfo:GFO_1622 periplasmic substrate-binding protein; SPTR: uncharacterized protein; periplasmic substrate-binding protein complement(6170418..6171281) Cyclobacterium marinum DSM 745 11038819 YP_004776979.1 CDS Cycma_5064 NC_015914.1 6171481 6172542 D PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411:IPR000771; KEGG: lby:Lbys_3010 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; SPTR: Fructose-bisphosphate aldolase, class II; TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 6171481..6172542 Cyclobacterium marinum DSM 745 11038820 YP_004776980.1 CDS Cycma_5065 NC_015914.1 6172725 6172922 D hypothetical protein 6172725..6172922 Cyclobacterium marinum DSM 745 11038821 YP_004776981.1 CDS Cycma_5066 NC_015914.1 6173163 6173393 D hypothetical protein 6173163..6173393 Cyclobacterium marinum DSM 745 11038822 YP_004776982.1 CDS Cycma_5067 NC_015914.1 6173414 6175510 R PFAM: Acetyl xylan esterase (AXE1); COGs: COG3458 Acetyl esterase (deacetylase); KEGG: rba:RB609 xylan esterase; SPTR: uncharacterized protein; xylan esterase complement(6173414..6175510) Cyclobacterium marinum DSM 745 11038823 YP_004776983.1 CDS Cycma_5068 NC_015914.1 6175696 6176583 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_0115 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Tat (Twin-arginine translocation) pathway signal sequence containing protein; xylose isomerase domain-containing protein complement(6175696..6176583) Cyclobacterium marinum DSM 745 11038824 YP_004776984.1 CDS Cycma_5069 NC_015914.1 6176594 6177772 R KEGG: dfe:Dfer_2740 acetyl xylan esterase; SPTR: Acetyl xylan esterase; acetyl xylan esterase complement(6176594..6177772) Cyclobacterium marinum DSM 745 11038825 YP_004776985.1 CDS Cycma_5070 NC_015914.1 6177803 6179071 R KEGG: dfe:Dfer_3262 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6177803..6179071) Cyclobacterium marinum DSM 745 11038826 YP_004776986.1 CDS Cycma_5071 NC_015914.1 6179100 6180506 R KEGG: sli:Slin_0048 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6179100..6180506) Cyclobacterium marinum DSM 745 11038827 YP_004776987.1 CDS Cycma_5072 NC_015914.1 6181212 6182627 D PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: amt:Amet_0555 altronate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; SPTR: Altronate oxidoreductase; mannitol dehydrogenase 6181212..6182627 Cyclobacterium marinum DSM 745 11038828 YP_004776988.1 CDS Cycma_5073 NC_015914.1 6182889 6184202 R PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452:IPR012307:IPR001998; KEGG: cpi:Cpin_1929 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; xylose isomerase complement(6182889..6184202) Cyclobacterium marinum DSM 745 11038829 YP_004776989.1 CDS Cycma_5074 NC_015914.1 6184242 6185732 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: sli:Slin_4247 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: carbohydrate kinase; carbohydrate kinase complement(6184242..6185732) Cyclobacterium marinum DSM 745 11038830 YP_004776990.1 CDS Cycma_5075 NC_015914.1 6185753 6187396 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR019900:IPR001734; KEGG: sodium solute transporter superfamily protein; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(6185753..6187396) Cyclobacterium marinum DSM 745 11038831 YP_004776991.1 CDS Cycma_5076 NC_015914.1 6187973 6188434 D KEGG: wvi:Weevi_1683 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein 6187973..6188434 Cyclobacterium marinum DSM 745 11038832 YP_004776992.1 CDS Cycma_5077 NC_015914.1 6188660 6189343 R PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: psn:Pedsa_1973 protein of unknown function DUF2490; PFAM: Protein of unknown function DUF2490; SPTR: 3-dehydroquinate dehydratase; hypothetical protein complement(6188660..6189343) Cyclobacterium marinum DSM 745 11038833 YP_004776993.1 CDS Cycma_5078 NC_015914.1 6189343 6189918 R KEGG: psn:Pedsa_1972 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6189343..6189918) Cyclobacterium marinum DSM 745 11038834 YP_004776994.1 CDS Cycma_5079 NC_015914.1 6190261 6191850 R PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: cpi:Cpin_5236 microcystin LR degradation protein MlrC; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: MlrC protein; microcystin LR degradation protein MlrC complement(6190261..6191850) Cyclobacterium marinum DSM 745 11038835 YP_004776995.1 CDS Cycma_5080 NC_015914.1 6192184 6193254 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: wvi:Weevi_0086 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Alkaline D-peptidase and alkaline D-peptidase fusion; beta-lactamase 6192184..6193254 Cyclobacterium marinum DSM 745 11038836 YP_004776996.1 CDS Cycma_5081 NC_015914.1 6193264 6194586 R PFAM: Phosphotransferase enzyme family; ABC1 family; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: chu:CHU_0987 protein kinase; PFAM: ABC-1; SPTR: ABC1 family protein; ABC transporter complement(6193264..6194586) Cyclobacterium marinum DSM 745 11038837 YP_004776997.1 CDS Cycma_5082 NC_015914.1 6194589 6195245 R KEGG: chu:CHU_0986 hypothetical protein; SPTR: uncharacterized protein; hypothetical protein complement(6194589..6195245) Cyclobacterium marinum DSM 745 11038838 YP_004776998.1 CDS Cycma_5083 NC_015914.1 6195439 6196764 D PFAM: Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: ilo:IL0916 carboxyl-terminal protease; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: carboxyl-protease; peptidase S41 6195439..6196764 Cyclobacterium marinum DSM 745 11038839 YP_004776999.1 CDS Cycma_5084 NC_015914.1 6197344 6198858 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2115 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(6197344..6198858) Cyclobacterium marinum DSM 745 11038840 YP_004777000.1 CDS Cycma_5085 NC_015914.1 6198880 6202191 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2116 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(6198880..6202191) Cyclobacterium marinum DSM 745 11038841 YP_004777001.1 CDS Cycma_5086 NC_015914.1 6202297 6203346 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_0804 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: anti-sigma factor; anti-FecI sigma factor FecR complement(6202297..6203346) Cyclobacterium marinum DSM 745 11038842 YP_004777002.1 CDS Cycma_5087 NC_015914.1 6203479 6204090 R PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: sli:Slin_3388 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(6203479..6204090) Cyclobacterium marinum DSM 745 11038843 YP_004777003.1 CDS Cycma_5088 NC_015914.1 6204273 6205025 D PFAM: Fatty acid desaturase; COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: dfe:Dfer_0451 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase; manually curated; fatty acid desaturase 6204273..6205025 Cyclobacterium marinum DSM 745 11038844 YP_004777004.1 CDS Cycma_5089 NC_015914.1 6205336 6205701 D PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: psn:Pedsa_3661 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional regulator; CopY family transcriptional repressor 6205336..6205701 Cyclobacterium marinum DSM 745 11038845 YP_004777005.1 CDS Cycma_5090 NC_015914.1 6206014 6207417 R PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: shg:Sph21_2004 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(6206014..6207417) Cyclobacterium marinum DSM 745 11038846 YP_004777006.1 CDS Cycma_5091 NC_015914.1 6208282 6209040 R PFAM: Inositol monophosphatase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006240:IPR000760; KEGG: bvu:BVU_0420 CysQ, sulfite synthesis pathway protein; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; 3'(2'),5'-bisphosphate nucleotidase complement(6208282..6209040) Cyclobacterium marinum DSM 745 11038847 YP_004777007.1 CDS Cycma_5092 NC_015914.1 6209187 6210446 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR005225:IPR011779:IPR000795:IPR004161; KEGG: mtt:Ftrac_2437 sulfate adenylyltransferase subunit 1; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Sulfate adenylyltransferase, large subunit/adenylylsulfate kinase; TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein; sulfate adenylyltransferase large subunit complement(6209187..6210446) Cyclobacterium marinum DSM 745 11038848 YP_004777008.1 CDS Cycma_5093 NC_015914.1 6210597 6211502 R PFAM: Phosphoadenosine phosphosulfate reductase; TIGRFAM: sulfate adenylyltransferase, small subunit; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784:IPR002500; KEGG: caa:Caka_0839 sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: Sulfate adenylyltransferase, small subunit; TIGRFAM: Sulphate adenylyltransferase, small subunit; sulfate adenylyltransferase complement(6210597..6211502) Cyclobacterium marinum DSM 745 11038849 YP_004777009.1 CDS Cycma_5094 NC_015914.1 6211504 6212097 R PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); COGs: COG0529 Adenylylsulfate kinase and related kinase; HAMAP: Adenylyl-sulfate kinase; InterPro IPR002891; KEGG: pmx:PERMA_1989 adenylylsulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal; SPTR: Adenylyl-sulfate kinase; TIGRFAM: Adenylylsulphate kinase, C-terminal; adenylylsulfate kinase complement(6211504..6212097) Cyclobacterium marinum DSM 745 11038850 YP_004777010.1 CDS Cycma_5095 NC_015914.1 6212134 6213891 R PFAM: TrkA-C domain; Citrate transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: tam:Theam_0664 TrkA-C domain protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR: citrate transporter; TrkA-C domain-containing protein complement(6212134..6213891) Cyclobacterium marinum DSM 745 11038851 YP_004777011.1 CDS Cycma_5096 NC_015914.1 6214372 6215319 D InterPro IPR004843; KEGG: msv:Mesil_3324 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: uncharacterized protein; metallophosphoesterase 6214372..6215319 Cyclobacterium marinum DSM 745 11038852 YP_004777012.1 CDS Cycma_5097 NC_015914.1 6215459 6217360 D PFAM: Glycosyl hydrolase 20, catalytic domain; Glycosyl hydrolase 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: shg:Sph21_0656 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like; SPTR: Beta-N-acetylhexosaminidase; glycoside hydrolase 6215459..6217360 Cyclobacterium marinum DSM 745 11038853 YP_004777013.1 CDS Cycma_5098 NC_015914.1 6217662 6218222 R PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: abortive infection protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease; abortive infection protein complement(6217662..6218222) Cyclobacterium marinum DSM 745 11038854 YP_004777014.1 CDS Cycma_5099 NC_015914.1 6218380 6218817 R PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR019904:IPR003718; KEGG: chu:CHU_2252 osmotically inducible protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Osmotically inducible protein; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; OsmC subfamily peroxiredoxin complement(6218380..6218817) Cyclobacterium marinum DSM 745 11038855 YP_004777015.1 CDS Cycma_5100 NC_015914.1 6219013 6220887 R PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; COGs: COG1808 membrane protein; InterPro IPR013031:IPR005240; KEGG: dak:DaAHT2_2330 hypothetical protein; PFAM: Protein of unknown function DUF389; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00341; hypothetical protein complement(6219013..6220887) Cyclobacterium marinum DSM 745 11038856 YP_004777016.1 CDS Cycma_5101 NC_015914.1 6220989 6221126 R IMG reference gene:2506464831_SP; hypothetical protein complement(6220989..6221126) Cyclobacterium marinum DSM 745 11038857 Cycma_R0001 tRNA Cycma_R0001 NC_015914.1 131105 131189 D tRNA-Leu 131105..131189 Cyclobacterium marinum DSM 745 11035124 Cycma_R0002 tRNA Cycma_R0002 NC_015914.1 245979 246054 D tRNA-Gln 245979..246054 Cyclobacterium marinum DSM 745 11035208 Cycma_R0004 tRNA Cycma_R0004 NC_015914.1 360926 360999 D tRNA-Arg 360926..360999 Cyclobacterium marinum DSM 745 11035344 Cycma_R0005 tRNA Cycma_R0005 NC_015914.1 361055 361130 D tRNA-Lys 361055..361130 Cyclobacterium marinum DSM 745 11035345 Cycma_R0006 tRNA Cycma_R0006 NC_015914.1 401235 401308 D tRNA-Ala 401235..401308 Cyclobacterium marinum DSM 745 11035378 Cycma_R0008 tRNA Cycma_R0008 NC_015914.1 755786 755867 D tRNA-Leu 755786..755867 Cyclobacterium marinum DSM 745 11036972 Cycma_R0009 tRNA Cycma_R0009 NC_015914.1 1217206 1217281 R tRNA-His complement(1217206..1217281) Cyclobacterium marinum DSM 745 11037339 Cycma_R0010 tRNA Cycma_R0010 NC_015914.1 1633816 1633890 D tRNA-Arg 1633816..1633890 Cyclobacterium marinum DSM 745 11033803 Cycma_R0011 tRNA Cycma_R0011 NC_015914.1 2031194 2031271 D tRNA-Pro 2031194..2031271 Cyclobacterium marinum DSM 745 11034168 Cycma_R0012 tRNA Cycma_R0012 NC_015914.1 2191898 2191970 D tRNA-Lys 2191898..2191970 Cyclobacterium marinum DSM 745 11034318 Cycma_R0014 tRNA Cycma_R0014 NC_015914.1 2240343 2240416 D tRNA-Ile 2240343..2240416 Cyclobacterium marinum DSM 745 11034355 Cycma_R0015 tRNA Cycma_R0015 NC_015914.1 2240731 2240807 D tRNA-Ala 2240731..2240807 Cyclobacterium marinum DSM 745 11034356 Cycma_R0018 tRNA Cycma_R0018 NC_015914.1 2469395 2469470 D tRNA-Phe 2469395..2469470 Cyclobacterium marinum DSM 745 11036006 Cycma_R0019 tRNA Cycma_R0019 NC_015914.1 2538799 2538871 D tRNA-Gly 2538799..2538871 Cyclobacterium marinum DSM 745 11036147 Cycma_R0020 tRNA Cycma_R0020 NC_015914.1 2538964 2539047 D tRNA-Leu 2538964..2539047 Cyclobacterium marinum DSM 745 11036148 Cycma_R0021 tRNA Cycma_R0021 NC_015914.1 2544220 2544296 R tRNA-Pro complement(2544220..2544296) Cyclobacterium marinum DSM 745 11036153 Cycma_R0022 tRNA Cycma_R0022 NC_015914.1 2544691 2544767 D tRNA-Asn 2544691..2544767 Cyclobacterium marinum DSM 745 11036154 Cycma_R0023 tRNA Cycma_R0023 NC_015914.1 2658404 2658477 R tRNA-Cys complement(2658404..2658477) Cyclobacterium marinum DSM 745 11036333 Cycma_R0024 tRNA Cycma_R0024 NC_015914.1 2764610 2764685 R tRNA-Met complement(2764610..2764685) Cyclobacterium marinum DSM 745 11036499 Cycma_R0025 tRNA Cycma_R0025 NC_015914.1 2862175 2862252 D tRNA-Val 2862175..2862252 Cyclobacterium marinum DSM 745 11036663 Cycma_R0026 tRNA Cycma_R0026 NC_015914.1 2862303 2862380 D tRNA-Val 2862303..2862380 Cyclobacterium marinum DSM 745 11036664 Cycma_R0028 tRNA Cycma_R0028 NC_015914.1 3016045 3016130 D tRNA-Tyr 3016045..3016130 Cyclobacterium marinum DSM 745 11037604 Cycma_R0029 tRNA Cycma_R0029 NC_015914.1 3016278 3016353 D tRNA-Gly 3016278..3016353 Cyclobacterium marinum DSM 745 11037605 Cycma_R0030 tRNA Cycma_R0030 NC_015914.1 3016384 3016455 D tRNA-Thr 3016384..3016455 Cyclobacterium marinum DSM 745 11037606 Cycma_R0031 tRNA Cycma_R0031 NC_015914.1 3017817 3017890 D tRNA-Trp 3017817..3017890 Cyclobacterium marinum DSM 745 11037608 Cycma_R0032 tRNA Cycma_R0032 NC_015914.1 3204903 3204979 D tRNA-Arg 3204903..3204979 Cyclobacterium marinum DSM 745 11037794 Cycma_R0036 tRNA Cycma_R0036 NC_015914.1 3316716 3316797 R tRNA-Leu complement(3316716..3316797) Cyclobacterium marinum DSM 745 11037887 Cycma_R0040 tRNA Cycma_R0040 NC_015914.1 3398065 3398149 R tRNA-Ser complement(3398065..3398149) Cyclobacterium marinum DSM 745 11037957 Cycma_R0041 tRNA Cycma_R0041 NC_015914.1 3662730 3662803 R tRNA-Met complement(3662730..3662803) Cyclobacterium marinum DSM 745 11038170 Cycma_R0042 tRNA Cycma_R0042 NC_015914.1 3675626 3675698 D tRNA-Thr 3675626..3675698 Cyclobacterium marinum DSM 745 11038183 Cycma_R0043 tRNA Cycma_R0043 NC_015914.1 3808464 3808550 D tRNA-Ser 3808464..3808550 Cyclobacterium marinum DSM 745 11034409 Cycma_R0044 tRNA Cycma_R0044 NC_015914.1 4090737 4090813 D tRNA-Met 4090737..4090813 Cyclobacterium marinum DSM 745 11034635 Cycma_R0045 tRNA Cycma_R0045 NC_015914.1 4785016 4785090 R tRNA-Glu complement(4785016..4785090) Cyclobacterium marinum DSM 745 11035922 Cycma_R0046 tRNA Cycma_R0046 NC_015914.1 4785118 4785189 R tRNA-Glu complement(4785118..4785189) Cyclobacterium marinum DSM 745 11035923 Cycma_R0047 tRNA Cycma_R0047 NC_015914.1 5013079 5013153 R tRNA-Val complement(5013079..5013153) Cyclobacterium marinum DSM 745 11036274 Cycma_R0048 tRNA Cycma_R0048 NC_015914.1 5577040 5577128 R tRNA-Ser complement(5577040..5577128) Cyclobacterium marinum DSM 745 11038362 Cycma_R0049 tRNA Cycma_R0049 NC_015914.1 5622214 5622290 D tRNA-Arg 5622214..5622290 Cyclobacterium marinum DSM 745 11038401 Cycma_R0050 tRNA Cycma_R0050 NC_015914.1 6080810 6080883 D tRNA-Asp 6080810..6080883 Cyclobacterium marinum DSM 745 11038747 Cycma_R0051 tRNA Cycma_R0051 NC_015914.1 6081592 6081665 D tRNA-Asp 6081592..6081665 Cyclobacterium marinum DSM 745 11038748 Cycma_R0013 rRNA Cycma_R0013 NC_015914.1 2238767 2240278 D 16S ribosomal RNA 2238767..2240278 Cyclobacterium marinum DSM 745 11034354 Cycma_R0016 rRNA Cycma_R0016 NC_015914.1 2240991 2243878 D 23S ribosomal RNA 2240991..2243878 Cyclobacterium marinum DSM 745 11035646 Cycma_R0017 rRNA Cycma_R0017 NC_015914.1 2243983 2244094 D 5S ribosomal RNA 2243983..2244094 Cyclobacterium marinum DSM 745 11035647 Cycma_R0033 rRNA Cycma_R0033 NC_015914.1 3205391 3206902 D 16S ribosomal RNA 3205391..3206902 Cyclobacterium marinum DSM 745 11037795 Cycma_R0034 rRNA Cycma_R0034 NC_015914.1 3207098 3209985 D 23S ribosomal RNA 3207098..3209985 Cyclobacterium marinum DSM 745 11037796 Cycma_R0035 rRNA Cycma_R0035 NC_015914.1 3210089 3210206 D 5S ribosomal RNA 3210089..3210206 Cyclobacterium marinum DSM 745 11037797 Cycma_R0037 rRNA Cycma_R0037 NC_015914.1 3325804 3327315 D 16S ribosomal RNA 3325804..3327315 Cyclobacterium marinum DSM 745 11037894 Cycma_R0038 rRNA Cycma_R0038 NC_015914.1 3327511 3330398 D 23S ribosomal RNA 3327511..3330398 Cyclobacterium marinum DSM 745 11037895 Cycma_R0039 rRNA Cycma_R0039 NC_015914.1 3330503 3330614 D 5S ribosomal RNA 3330503..3330614 Cyclobacterium marinum DSM 745 11037896