-- dump date   	20140619_055056
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004772017.1	PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR013317:IPR013159:IPR003593:IPR001957; KEGG: mtt:Ftrac_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein DnaA; TIGRFAM: Chromosomal replication control, initiator DnaA
YP_004772018.1	KEGG: psn:Pedsa_2905 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004772019.1	PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: mtt:Ftrac_3379 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: Transmembrane protein
YP_004772020.1	PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: mtt:Ftrac_3378 electron transport protein sco1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: SCO1/SenC family protein
YP_004772021.1	PFAM: Cytochrome c; InterPro IPR003088; KEGG: mtt:Ftrac_3377 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I
YP_004772022.1	KEGG: psn:Pedsa_1450 hypothetical protein; SPTR:  uncharacterized protein
YP_004772023.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004772024.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mms:mma_3208 ABC-type transport system, permease component; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  permease
YP_004772025.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: lby:Lbys_3320 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system, ATP-binding protein
YP_004772026.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR001789:IPR003661:IPR003594; KEGG: cyc:PCC7424_1114 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Sensor histidine kinase
YP_004772027.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR000014; KEGG: srm:SRM_00549 sensory histidine protein kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: PAS domain-containing protein; TIGRFAM: PAS
YP_004772029.1	PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR003781:IPR005811:IPR005810; KEGG: mtt:Ftrac_1148 succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit
YP_004772030.1	PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Protein of unknown function (DUF1587); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585); InterProIPR013036:IPR013043:IPR013042:IPR013039:IPR 011478; KEGG: ipa:Isop_0343 hypothetical protein; PFAM: Protein of unknown function DUF1592; Protein of unknown function DUF1587; Protein of unknown function DUF1595; Protein of unknown function DUF1588; Protein of unknown function DUF1585; SPTR:  uncharacterized protein
YP_004772031.1	PFAM: Protein of unknown function (DUF1552); InterPro IPR011447:IPR006311; KEGG: ipa:Isop_0342 hypothetical protein; PFAM: Protein of unknown function DUF1552; SPTR:  uncharacterized protein
YP_004772032.1	PFAM: Planctomycete cytochrome C; InterPro IPR011429; KEGG: fbc:FB2170_08779 hypothetical protein; PFAM: Cytochrome C, Planctomycete; SPTR:  uncharacterized protein
YP_004772033.1	PFAM: PhoPQ-activated pathogenicity-related protein; COGs: COG4287 PhoPQ-activated pathogenicity-related protein; InterPro IPR009199; KEGG: sus:Acid_2416 PhoPQ-activated pathogenicity-related protein; PFAM: PhoPQ-activated pathogenicity-related protein, PqaA type; SPTR: Autocrine proliferation repressor
YP_004772034.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterProIPR019551:IPR002372:IPR019556:IPR003088:IPR 018391; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; Cytochrome c, class I; SPTR: Cytochrome c subfamily
YP_004772035.1	PFAM: Phosphoglycerate mutase; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: sua:Saut_0659  phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase domain protein
YP_004772036.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: mtt:Ftrac_0810 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase
YP_004772037.1	PFAM: MatE; TIGRFAM:  efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mtt:Ftrac_1152 mate efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: Multidrug resistance protein; TIGRFAM: Multi antimicrobial extrusion protein MatE
YP_004772038.1	PFAM: NUDIX domain; InterPro IPR000086; KEGG: mtt:Ftrac_0076 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase
YP_004772039.1	PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: dfe:Dfer_3786 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family
YP_004772040.1	KEGG: mtt:Ftrac_2413 hypothetical protein; SPTR:  uncharacterized protein
YP_004772041.1	COGs: COG4091 homoserine dehydrogenase; KEGG: rmr:Rmar_1155 oxidoreductase domain-containing protein; SPTR: Oxidoreductase domain protein
YP_004772042.1	PFAM: Protein of unknown function (DUF2723); KEGG: mtt:Ftrac_2129 hypothetical protein; SPTR: Membrane protein
YP_004772043.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mtt:Ftrac_2286 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Probable 3-demethylubiquinone-9 3-O-methyltransferase
YP_004772044.1	KEGG: dfe:Dfer_2660 hypothetical protein; SPTR:  uncharacterized protein
YP_004772045.1	PFAM: SpoU rRNA Methylase; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: mtt:Ftrac_2133 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: TrmH family RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3
YP_004772046.1	PFAM: RmuC family; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: ran:Riean_1384 hypothetical protein; PFAM: RmuC; SPTR: RmuC domain protein
YP_004772047.1	KEGG: dfe:Dfer_4245 hypothetical protein; SPTR:  uncharacterized protein
YP_004772048.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: dfe:Dfer_1887 signal peptide; SPTR: Signal peptide
YP_004772049.1	PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: dfe:Dfer_1888 peptidase M19 renal dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Peptidase M19 renal dipeptidase
YP_004772050.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175:IPR006056; KEGG: dfe:Dfer_1892 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: YjgF-like protein
YP_004772051.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dfe:Dfer_1898 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004772052.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dfe:Dfer_1893 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004772053.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; KEGG: dfe:Dfer_1894 oxidoreductase domain protein; SPTR: Oxidoreductase domain protein
YP_004772054.1	PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: dfe:Dfer_1895 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase
YP_004772055.1	PFAM: HpcH/HpaI aldolase/citrate lyase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: dfe:Dfer_1896 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: HpcH/HpaI aldolase
YP_004772056.1	PFAM: Oxidoreductase FAD-binding domain; Siderophore-interacting protein; COGs: COG2375 Siderophore-interacting protein; InterPro IPR007037; KEGG: chu:CHU_1980 siderophore-interacting protein; PFAM: Siderophore-interacting protein; SPTR: Siderophore-interacting protein
YP_004772057.1	PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: rbi:RB2501_12137 hypothetical protein; SPTR:  uncharacterized protein
YP_004772058.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: chu:CHU_0628 flavoprotein; PFAM: HI0933-like protein; SPTR: Flavoprotein; TIGRFAM: HI0933-like protein
YP_004772059.1	PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: sli:Slin_0609 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR:  uncharacterized protein
YP_004772060.1	PFAM: Glycosyl hydrolase 67 N-terminus; KEGG: sli:Slin_6579 hypothetical protein; SPTR:  uncharacterized protein
YP_004772061.1	PFAM: Beta-galactosidase; KEGG: hch:HCH_01403 hypothetical protein; SPTR:  uncharacterized protein
YP_004772062.1	PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: cly:Celly_1285 sodium:dicarboxylate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Serine/threonine transporter
YP_004772063.1	PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; COGs: COG0376 Catalase (peroxidase I); HAMAP: Catalase-peroxidase haem; InterPro IPR002016:IPR000763; KEGG: fbc:FB2170_07215 catalase-peroxidase; PFAM: Haem peroxidase, plant/fungal/bacterial; SPTR: Catalase-peroxidase; TIGRFAM: Catalase-peroxidase haem
YP_004772064.1	PFAM: BlaR1 peptidase M56; Surface antigen variable number repeat; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR008756:IPR010827; KEGG: cat:CA2559_07981 TonB; PFAM: Surface antigen variable number; Peptidase M56, BlaR1; SPTR: TonB
YP_004772065.1	PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: phe:Phep_0214 penicillinase repressor; PFAM: Penicillinase repressor; SPTR:  transcriptional regulator
YP_004772066.1	InterPro IPR006626
YP_004772068.1	KEGG: eli:ELI_11025 hypothetical protein; SPTR:  integral membrane protein
YP_004772069.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; InterPro IPR000005:IPR018060; KEGG: aba:Acid345_1425 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family protein
YP_004772070.1	KEGG: chu:CHU_3611 hypothetical protein; SPTR:  uncharacterized protein
YP_004772071.1	PFAM: Helix-turn-helix; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004772072.1	KEGG: cao:Celal_3595 hypothetical protein; SPTR:  uncharacterized protein
YP_004772073.1	KEGG: gfo:GFO_2425 hypothetical protein; SPTR:  uncharacterized protein
YP_004772074.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: slg:SLGD_02237 phage tail fiber; PFAM: Lipase, GDSL; SPTR:  uncharacterized protein
YP_004772075.1	PFAM: Pectate lyase; COGs: COG3866 Pectate lyase; InterPro IPR002022; KEGG: S-layer domain-containing protein; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; SPTR: Cell wall/surface repeat protein
YP_004772076.1	KEGG: psn:Pedsa_0941 hypothetical protein; SPTR:  uncharacterized protein
YP_004772077.1	KEGG: psn:Pedsa_0942 hypothetical protein; SPTR:  uncharacterized protein
YP_004772078.1	KEGG: psn:Pedsa_0943 hypothetical protein; SPTR:  uncharacterized protein
YP_004772079.1	KEGG: psn:Pedsa_0944 hypothetical protein; SPTR:  uncharacterized protein
YP_004772081.1	PFAM: Peptidase M15; InterPro IPR013230; KEGG: rbi:RB2501_01256 hypothetical protein; PFAM: Peptidase M15A, C-terminal; SPTR:  uncharacterized protein
YP_004772082.1	PFAM: Holin family; KEGG: psn:Pedsa_0946 hypothetical protein; SPTR:  uncharacterized protein
YP_004772083.1	KEGG: osp:Odosp_0803 hypothetical protein; SPTR: Predicted protein
YP_004772084.1	KEGG: osp:Odosp_0804 hypothetical protein; SPTR: Predicted protein
YP_004772085.1	PFAM:  transcription regulator (DUF1323); KEGG: osp:Odosp_0805 hypothetical protein; SPTR:  uncharacterized protein
YP_004772086.1	KEGG: osp:Odosp_0806 hypothetical protein; SPTR:  uncharacterized protein
YP_004772087.1	PFAM: Protein of unknown function (DUF1320); KEGG: osp:Odosp_0807 hypothetical protein; SPTR: Predicted protein
YP_004772088.1	PFAM: Protein of unknown function (DUF935); Phage Mu protein F like protein; TIGRFAM: phage  head morphogenesis protein, SPP1 gp7 family; COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279:IPR006528; KEGG: osp:Odosp_0808 phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage  head morphogenesis protein, SPP1 gp7; Protein of unknown function DUF935; SPTR: Predicted protein; TIGRFAM: Phage  head morphogenesis protein, SPP1 gp7
YP_004772089.1	PFAM: Phage virion morphogenesis family; KEGG: psn:Pedsa_0954 hypothetical protein; SPTR:  uncharacterized protein
YP_004772090.1	KEGG: psn:Pedsa_0955 hypothetical protein; SPTR:  uncharacterized protein
YP_004772091.1	KEGG: cpi:Cpin_0278 hypothetical protein; SPTR:  uncharacterized protein
YP_004772094.1	SPTR:  uncharacterized protein
YP_004772097.1	KEGG: mpo:Mpop_2745 hypothetical protein; SPTR:  uncharacterized protein
YP_004772100.1	KEGG: bbl:BLBBGE_301 hypothetical protein; SPTR:  uncharacterized protein
YP_004772101.1	KEGG: osp:Odosp_0820 hypothetical protein; SPTR:  uncharacterized protein
YP_004772103.1	PFAM: Protein of unknown function (DUF3164); KEGG: psn:Pedsa_0970 hypothetical protein; SPTR:  uncharacterized protein
YP_004772107.1	KEGG: wvi:Weevi_0139 hypothetical protein; SPTR:  uncharacterized protein
YP_004772108.1	KEGG: osp:Odosp_0824 hypothetical protein; SPTR:  uncharacterized protein
YP_004772110.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: ran:Riean_0339 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SPTR:  uncharacterized protein
YP_004772112.1	KEGG: dfe:Dfer_3218 hypothetical protein; SPTR:  uncharacterized protein
YP_004772113.1	KEGG: slp:Slip_0781 PHP domain protein; SPTR: PHP domain protein
YP_004772114.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR002018; KEGG: psl:Psta_2974 alpha/beta hydrolase fold-3 domain-containing protein; PFAM: Carboxylesterase, type B; SPTR: Alpha/beta hydrolase fold-3 domain protein
YP_004772115.1	PFAM: FG-GAP repeat; InterPro IPR013517; KEGG: pbs:Plabr_4234 FG-GAP repeat protein; PFAM: FG-GAP; SPTR:  uncharacterized protein
YP_004772116.1	COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: pdi:BDI_1341  transmembrane protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR:  transmembrane protein
YP_004772117.1	KEGG: pbs:Plabr_4678 sialidase; SPTR: Probable sialidase
YP_004772118.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: gfo:GFO_1136 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide binding-regulatory protein
YP_004772119.1	PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: gfo:GFO_1139 pirin family protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin family protein
YP_004772120.1	KEGG: bfs:BF0044 hypothetical protein; SPTR:  uncharacterized protein
YP_004772122.1	KEGG: pdi:BDI_3448 hypothetical protein; SPTR:  uncharacterized protein
YP_004772123.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR001450; KEGG: glutamate synthase (NADPH); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S binding domain protein
YP_004772124.1	PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752:IPR002880; KEGG: gpb:HDN1F_09550 2-ketoglutarate: nadp oxidoreductase, alpha subunit; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; SPTR: 2-ketoglutarate: nadp oxidoreductase, alpha subunit; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit
YP_004772125.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: gpb:HDN1F_09560 2-ketoglutarate: NADP oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: 2-ketoglutarate: NADP oxidoreductase, beta subunit
YP_004772127.1	PFAM: IS66 Orf2 like protein; InterPro IPR008878; KEGG: zpr:ZPR_3984 transposase orf1, IS66 family protein; PFAM: Transposase (), IS66 Orf2 like; SPTR: Transposase orf1, IS66 family protein
YP_004772128.1	PFAM: Transposase IS66 family; COGs: COG3436 Transposase and inactivated derivatives; InterPro IPR004291; KEGG: shg:Sph21_5072 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase
YP_004772129.1	PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126; KEGG: rbi:RB2501_04560 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; SPTR: DNA polymerase IV 2
YP_004772130.1	PFAM: Helix-turn-helix; InterPro IPR001387:IPR019759; KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator
YP_004772132.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fri:FraEuI1c_5545 methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004772133.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: lby:Lbys_1078 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Transcriptional regulator, MarR family/acetyltransferase, GNAT family protein
YP_004772134.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: phe:Phep_0424 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70
YP_004772135.1	KEGG: cpi:Cpin_4989 hypothetical protein; SPTR:  uncharacterized protein
YP_004772136.1	PFAM: Aldose 1-epimerase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: lcb:LCABL_16300 galactose mutarotase related enzyme; PFAM: Aldose 1-epimerase; SPTR: Galactose mutarotase related enzyme
YP_004772137.1	PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: mtt:Ftrac_1356 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004772138.1	KEGG: sli:Slin_4282 hypothetical protein; SPTR:  uncharacterized protein
YP_004772139.1	PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743; KEGG: chu:CHU_2218 hypothetical protein; PFAM: Protein of unknown function DUF57; SPTR:  CRISPR-associated protein Cas6
YP_004772140.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; small GTP-binding protein domain; COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013029:IPR004396; KEGG: chu:CHU_2219 GTP-dependent nucleic acid-binding protein EngD; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092
YP_004772141.1	PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: mtt:Ftrac_2891 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR:  uncharacterized protein
YP_004772142.1	PFAM: Protein of unknown function (DUF3276); InterPro IPR006628; KEGG: chu:CHU_2220 hypothetical protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR:  uncharacterized protein
YP_004772143.1	InterPro IPR001450; KEGG: mtt:Ftrac_1095 ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Ferredoxin
YP_004772144.1	PFAM: Acyl-CoA reductase (LuxC); InterPro IPR008670; KEGG: mtt:Ftrac_1123 acyl-CoA reductase; PFAM: Acyl-CoA reductase; SPTR:  uncharacterized protein
YP_004772145.1	PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: mtt:Ftrac_0396 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR:  uncharacterized protein
YP_004772146.1	PFAM: CsbD-like; InterPro IPR008462; KEGG: shg:Sph21_2143 CsbD family protein; PFAM: CsbD-like; SPTR: CsbD family protein
YP_004772147.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: dfe:Dfer_1891 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; SPTR: 3-hydroxyacyl-CoA dehydrogenase NAD-binding
YP_004772148.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814; KEGG: dfe:Dfer_1890 aminotransferase class-III; PFAM: Aminotransferase class-III; SPTR: Aminotransferase class-III
YP_004772149.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: dfe:Dfer_1889 3-hydroxyacyl-CoA dehydrogenase domain protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal; 3-hydroxyacyl-CoA dehydrogenase, NAD binding; SPTR: 3-hydroxyacyl-CoA dehydrogenase domain protein
YP_004772150.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: dfe:Dfer_1903 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase
YP_004772151.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: spq:SPAB_02414 hypothetical protein; PFAM: Sodium/solute symporter; SPTR:  uncharacterized protein
YP_004772152.1	PFAM: Amidohydrolase; Aminotransferase class-III; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR006992:IPR005814; KEGG: sua:Saut_0133 aminotransferase class-III; PFAM: Aminotransferase class-III; Amidohydrolase 2; SPTR: Aminotransferase class-III
YP_004772153.1	PFAM: DinB family; InterPro IPR007837; KEGG: cly:Celly_0984 DinB family protein; PFAM: DinB; SPTR: DinB family protein
YP_004772154.1	KEGG: psl:Psta_0403 hypothetical protein; SPTR:  uncharacterized protein
YP_004772155.1	InterPro IPR006626; KEGG: psl:Psta_2307 hypothetical protein; SPTR:  uncharacterized protein
YP_004772156.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR004155:IPR003088:IPR013428:IPR013427; KEGG: rba:RB6185 L-sorbosone dehydrogenase; PFAM: Cytochrome c, class I; PBS lyase HEAT-like repeat; SPTR:  uncharacterized protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004772158.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: bth:BT_2172 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: SusC homolog
YP_004772161.1	KEGG: phe:Phep_0336 hypothetical protein; SPTR:  uncharacterized protein
YP_004772162.1	PFAM: Copper binding proteins, plastocyanin/azurin family; InterPro IPR000923; KEGG: phe:Phep_0335 blue (type 1) copper domain-containing protein; PFAM: Blue (type 1) copper domain; SPTR: Blue (Type 1) copper domain protein
YP_004772163.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2085 N-acetylgalactosamine-4-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfate sulfatase (GALNS)
YP_004772164.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0338 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR:  uncharacterized protein
YP_004772165.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0340 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR:  uncharacterized protein
YP_004772166.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: phe:Phep_0352 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Glutamine--scyllo-inositol transaminase
YP_004772167.1	KEGG: phe:Phep_0340 amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004772168.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0338 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004772169.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_2856 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004772170.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_2857 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004772171.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004772172.1	SPTR:  uncharacterized protein
YP_004772173.1	SPTR:  uncharacterized protein
YP_004772174.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4184 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004772175.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_0632 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004772176.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: sli:Slin_2839 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004772177.1	KEGG: shg:Sph21_2739 hypothetical protein; SPTR:  uncharacterized protein
YP_004772178.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR006311; KEGG: dfe:Dfer_1406 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR:  Tat (Twin-arginine translocation) pathway signal sequence containing protein
YP_004772179.1	KEGG: pbs:Plabr_1908 hypothetical protein; SPTR:  uncharacterized protein
YP_004772180.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR:  uncharacterized protein
YP_004772181.1	InterPro IPR006311; KEGG: ttr:Tter_2682 hypothetical protein; SPTR:  uncharacterized protein
YP_004772182.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: rba:RB12544 hypothetical protein; SPTR:  uncharacterized protein
YP_004772183.1	PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR010168; KEGG: lby:Lbys_1236 carboxypeptidase ss1; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase, M20D family; TIGRFAM: Peptidase M20D, amidohydrolase
YP_004772184.1	KEGG: phe:Phep_1693 cytochrome c class I; SPTR: Cytochrome c family protein
YP_004772185.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: dfe:Dfer_1886 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004772186.1	PFAM: BNR/Asp-box repeat; KEGG: dfe:Dfer_1899 hypothetical protein; SPTR:  uncharacterized protein
YP_004772187.1	KEGG: dfe:Dfer_1902 signal peptide; SPTR: Signal peptide
YP_004772188.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0172 N-sulfoglucosamine sulfohydrolase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004772189.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1904 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004772190.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1905 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004772191.1	KEGG: pmt:PMT0105 hypothetical protein; SPTR:  uncharacterized protein
YP_004772192.1	KEGG: pmt:PMT0105 hypothetical protein; SPTR:  uncharacterized protein
YP_004772193.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: dfe:Dfer_4314 transcriptional regulator, LuxR family; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma-70
YP_004772194.1	PFAM:  carbohydrate binding domain; Glycosyl hydrolase 20, catalytic domain; Glycosyl hydrolase 20, domain 2; Chitobiase/beta-hexosaminidase C-terminal domain; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR004866:IPR015882:IPR015883:IPR004867; KEGG: sli:Slin_6586 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Carbohydrate-binding, chitobiase/hexosaminidase-type, N-terminal; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, C-terminal; SPTR: Beta-N-acetylhexosaminidase
YP_004772195.1	PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: sli:Slin_6587 heparan-alpha-glucosaminide N-acetyltransferase; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Heparan-alpha-glucosaminide N-acetyltransferase
YP_004772196.1	KEGG: gym:GYMC10_3038 hypothetical protein; SPTR:  uncharacterized protein
YP_004772197.1	KEGG: fjo:Fjoh_4705 hypothetical protein; SPTR:  uncharacterized protein
YP_004772198.1	KEGG: mtt:Ftrac_2248 hypothetical protein; SPTR:  uncharacterized protein
YP_004772199.1	PFAM: Thymidine kinase; COGs: COG1435 Thymidine kinase; HAMAP: Thymidine kinase, subgroup; InterPro IPR001267:IPR020634; KEGG: mtt:Ftrac_2246 thymidine kinase; PFAM: Thymidine kinase; SPTR: Thymidine kinase; manually curated
YP_004772200.1	PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; COGs: COG1381 Recombinational DNA repair protein (RecF pathway); HAMAP: DNA repair protein recO; InterPro IPR003717; KEGG: lby:Lbys_2025 DNA repair protein RecO; PFAM: Recombination protein O, RecO; SPTR: DNA repair protein recO; TIGRFAM: Recombination protein O, RecO
YP_004772201.1	KEGG: zpr:ZPR_3184 hypothetical protein; SPTR:  uncharacterized protein
YP_004772202.1	PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3491 Isopenicillin N synthase and related dioxygenase; InterPro IPR005123; KEGG: dfe:Dfer_2706 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase
YP_004772203.1	PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; COGs: COG2059 Chromate transport protein ChrA; InterPro IPR003370:IPR014047; KEGG: sli:Slin_1603 chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter region; SPTR: Chromate transporter, permease component; TIGRFAM: Chromate transporter
YP_004772204.1	KEGG: mtt:Ftrac_2706 hypothetical protein; SPTR:  uncharacterized protein
YP_004772205.1	PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bhl:Bache_3007 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family
YP_004772206.1	PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; InterPro IPR001486; KEGG: gfo:GFO_1394 globin family protein; PFAM: Globin, truncated bacterial-like; SPTR: Bacterial-like globin family protein
YP_004772207.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fjo:Fjoh_2411 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2
YP_004772208.1	KEGG: gfo:GFO_1402 hypothetical protein; SPTR:  uncharacterized protein
YP_004772209.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: cat:CA2559_09348 probable hydrolytic enzyme; PFAM: Alpha/beta hydrolase fold-1; SPTR: Probable hydrolytic enzyme
YP_004772210.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834:IPR006402:IPR006439; KEGG: vex:VEA_000391 2-deoxyglucose-6-phosphate hydrolase YniC; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1
YP_004772212.1	KEGG: psn:Pedsa_0379 hypothetical protein; SPTR:  uncharacterized protein
YP_004772213.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase
YP_004772214.1	PFAM: Uracil DNA glycosylase superfamily; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: fbc:FB2170_06375 hypothetical protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase
YP_004772215.1	SPTR:  uncharacterized protein
YP_004772216.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family
YP_004772217.1	KEGG: dfe:Dfer_5762 hypothetical protein; SPTR:  uncharacterized protein
YP_004772218.1	PFAM: Phage integrase; InterPro IPR002104; KEGG: psn:Pedsa_0861 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase
YP_004772222.1	KEGG: ppn:Palpr_3000 exonuclease RNAse t and DNA polymerase III; SPTR: Exonuclease RNase T and DNA polymerase III
YP_004772223.1	PFAM: Serine dehydrogenasease; InterPro IPR002825; KEGG: apb:SAR116_0947 hypothetical protein; PFAM: Protein of unknown function DUF114; SPTR: Periplasmic serine protease (ClpP class)-like protein
YP_004772226.1	PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region; InterPro IPR010090; KEGG: shg:Sph21_3463 phage tail tape measure protein, TP901 family; SPTR: Phage tail tape measure protein, TP901 family; TIGRFAM: Phage tail tape measure protein TP901, core region
YP_004772228.1	InterPro IPR006626; KEGG: bgf:BC1003_2955 filamentous hemagglutinin family outer membrane protein; SPTR: All8078 protein
YP_004772232.1	PFAM: Pectate lyase; COGs: COG3866 Pectate lyase; InterPro IPR002022; KEGG: S-layer domain-containing protein; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; SPTR: Cell wall/surface repeat protein
YP_004772240.1	KEGG: shg:Sph21_3465 hypothetical protein
YP_004772243.1	PFAM: Phage lysozyme; COGs: COG3772 Phage-related lysozyme (muraminidase); InterPro IPR002196; KEGG: ipo:Ilyop_2031 lysozyme; PFAM: Glycoside hydrolase, family 24; SPTR: Lysozyme
YP_004772247.1	KEGG: shg:Sph21_3471 hypothetical protein; SPTR:  uncharacterized protein
YP_004772249.1	KEGG: pru:PRU_0944 hypothetical protein; SPTR:  uncharacterized protein
YP_004772252.1	KEGG: bfs:BF2315 hypothetical protein; SPTR:  uncharacterized protein
YP_004772254.1	KEGG: lby:Lbys_1053 hypothetical protein; SPTR:  uncharacterized protein
YP_004772258.1	PFAM: Protein of unknown function (DUF2466); COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: bvu:BVU_3185 DNA repair protein; PFAM: DNA repair, RadC-like; SPTR:  uncharacterized protein
YP_004772263.1	PFAM: Carbohydrate binding domain; InterPro IPR003610; KEGG: shg:Sph21_3480 hypothetical protein; PFAM: Carbohydrate-binding domain, family 5/12
YP_004772264.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907; KEGG: shg:Sph21_3481 peptidase S14 ClpP; PFAM: Peptidase S14, ClpP; SPTR: ATP-dependent Clp protease proteolytic subunit
YP_004772270.1	PFAM: Exonuclease; KEGG: sei:SPC_1272 endodeoxyribonuclease; SPTR:  uncharacterized protein
YP_004772271.1	PFAM: Rad17 cell cycle checkpoint protein
YP_004772279.1	PFAM: C-5 cytosine-specific DNA methylase; COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: pjd:Pjdr2_1600 C-5 cytosine-specific DNA methylase; PFAM: DNA methylase, C-5 cytosine-specific; SPTR: C-5 cytosine-specific DNA methylase
YP_004772280.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; COGs: COG0207 Thymidylate synthase; InterPro IPR000398; KEGG: mga:MGA_0699 thymidylate synthase; PFAM: Thymidylate synthase, C-terminal; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase, C-terminal
YP_004772281.1	KEGG: psn:Pedsa_0890 hypothetical protein; SPTR:  uncharacterized protein
YP_004772284.1	PFAM: DNA methylase; SNF2 family N-terminal domain; InterPro IPR002941; KEGG: ssm:Spirs_2515 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein
YP_004772287.1	KEGG: aav:Aave_1738 hypothetical protein; SPTR:  uncharacterized protein
YP_004772288.1	KEGG: shg:Sph21_3499 hypothetical protein; SPTR: Metal dependent phosphohydrolase
YP_004772296.1	PFAM: Helix-turn-helix; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004772297.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: psn:Pedsa_2404 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004772299.1	COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: phe:Phep_2874 ABC transporter permease; SPTR: ABC transporter permease
YP_004772300.1	PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cpi:Cpin_2549 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related
YP_004772301.1	PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase; COGs: COG1470 membrane protein; InterPro IPR010317; KEGG: cpi:Cpin_2550 hypothetical protein; PFAM: Protein of unknown function DUF916, cell surface SPTR:  uncharacterized protein
YP_004772302.1	PFAM: LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_12311 hypothetical protein; PFAM: LytTr DNA-binding region; SPTR:  uncharacterized protein
YP_004772303.1	KEGG: fbc:FB2170_01826 hypothetical protein; SPTR:  uncharacterized protein
YP_004772304.1	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR:  uncharacterized protein
YP_004772305.1	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR:  uncharacterized protein
YP_004772306.1	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR:  uncharacterized protein
YP_004772308.1	KEGG: shg:Sph21_0613 hypothetical protein; SPTR:  uncharacterized protein
YP_004772309.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: amu:Amuc_1707 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR:  metalloenzyme family protein
YP_004772310.1	KEGG: cse:Cseg_3202 hypothetical protein; SPTR:  LPS biosynthesis related membrane protein
YP_004772311.1	PFAM: Cupin domain; Helix-turn-helix; InterPro IPR001387:IPR013096; KEGG: shg:Sph21_0215 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR:  toxin-antitoxin system, antitoxin component, Xre family
YP_004772312.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM:  phosphonate catabolism associated alcohol dehydrogenase; COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR013154:IPR013149; KEGG: rba:RB5856 alcohol dehydrogenase, zinc-containing; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-containing
YP_004772313.1	PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR017741; KEGG: rba:RB5861 oxidase; PFAM: FAD dependent oxidoreductase; SPTR:  uncharacterized protein; TIGRFAM: FAD-dependent oxidoreductase, HpnW
YP_004772314.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: rba:RB5862 phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Probable phosphatase; TIGRFAM: phosphonatase-like hydrolase
YP_004772315.1	KEGG: sli:Slin_2097 hypothetical protein; SPTR:  uncharacterized protein
YP_004772316.1	PFAM: Acyltransferase; InterPro IPR002123; KEGG: fjo:Fjoh_1279 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase
YP_004772317.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_07880  secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004772318.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: cpi:Cpin_1059 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004772320.1	PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; COGs: COG0176 Transaldolase; HAMAP: transaldolase; InterPro IPR001585:IPR004731; KEGG: mtt:Ftrac_1407 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase C
YP_004772321.1	KEGG: mtt:Ftrac_1408 hypothetical protein; SPTR:  uncharacterized protein
YP_004772322.1	PFAM: ABC transporter; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_1409 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Cell-division ATP-binding protein
YP_004772323.1	KEGG: zpr:ZPR_4140 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004772324.1	SPTR:  uncharacterized protein
YP_004772325.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: ran:Riean_0865 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase oxidoreductase
YP_004772326.1	SPTR:  uncharacterized protein
YP_004772327.1	PFAM: Succinylglutamate desuccinylase / Aspartoacylase; COGs: COG3608 deacylase; InterPro IPR007036; KEGG: mtt:Ftrac_0333 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase
YP_004772328.1	PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR006094:IPR011601:IPR003170; KEGG: dfe:Dfer_3956 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004772329.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: mtt:Ftrac_0923 cmp/dcmp deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine/deoxycytidylate deaminase
YP_004772330.1	PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: cao:Celal_1181 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator
YP_004772333.1	PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109:IPR005279; KEGG: mtt:Ftrac_0196 amino acid/peptide transporter; PFAM: Oligopeptide transporter; SPTR: Di-/tripeptide transporter; TIGRFAM: Amino acid/peptide transporter
YP_004772334.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: ppn:Palpr_0780 peptidyL-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004772335.1	PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: Na+ dependent nucleoside transporter domain-containing protein; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; SPTR: Nucleoside transporter, NupC family
YP_004772336.1	PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729:IPR001943; KEGG: mtt:Ftrac_3401 hypothetical protein; PFAM: Protein of unknown function DUF151; UvrB/UvrC protein; SPTR: UvrB/UvrC protein
YP_004772337.1	PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: mtt:Ftrac_3400 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit
YP_004772338.1	PFAM: Electron transfer flavoprotein domain; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: mtt:Ftrac_3399 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, beta subunit
YP_004772339.1	KEGG: mtt:Ftrac_3398 hypothetical protein; SPTR:  uncharacterized protein
YP_004772340.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR007692; KEGG: mtt:Ftrac_0118 primary replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SPTR: Replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type
YP_004772341.1	PFAM: Exonuclease; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR013520; KEGG: mtt:Ftrac_0120 exonuclease RNAse t and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: Exonuclease
YP_004772342.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: sli:Slin_1326 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase
YP_004772343.1	PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789:IPR000014; KEGG: mtt:Ftrac_2272 pas/pac sensor protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR:  PAS/PAC sensor protein; TIGRFAM: PAS
YP_004772344.1	PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: mtt:Ftrac_2273 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein
YP_004772345.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003594; KEGG: mac:MA1270 sensory transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Sensory transduction histidine kinase
YP_004772346.1	PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fbc:FB2170_09421 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004772347.1	PFAM: MatE; TIGRFAM:  efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mtt:Ftrac_0636 mate efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE
YP_004772348.1	PFAM:  nucleotidyltransferase substrate binding domain; CBS domain; nucleotidyltransferase DUF294; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644:IPR005105:IPR018821; KEGG: psn:Pedsa_1073  CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase ; Cystathionine beta-synthase, core; Domain of unknown function DUF294, nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core; SPTR:  CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
YP_004772349.1	PFAM: Aconitase C-terminal domain; Aconitase (aconitate hydratase); TIGRFAM: aconitate hydratase 1; COGs: COG1048 Aconitase A; InterPro IPR001030:IPR000573:IPR006249; KEGG: gfo:GFO_1390 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: Aconitate hydratase 1; TIGRFAM: Aconitase/iron regulatory protein 2
YP_004772350.1	PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: phe:Phep_0795 mammalian cell entry related domain-containing protein; PFAM: Mammalian cell entry related; SPTR: ABC transporter, permease component
YP_004772351.1	PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593:IPR003439; KEGG: psn:Pedsa_2788 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004772352.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sli:Slin_1812 hypothetical protein; PFAM: Protein of unknown function DUF140; SPTR:  ABC transporter, permease
YP_004772353.1	PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: chu:CHU_3216 two-component response regulator, CheY-like; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR:  uncharacterized protein
YP_004772354.1	PFAM: Exodeoxyribonuclease V, gamma subunit; KEGG: pdi:BDI_1187 hypothetical protein; SPTR:  uncharacterized protein
YP_004772355.1	PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: pdi:BDI_2571 ATP-dependent helicase; PFAM: DNA helicase, UvrD/REP type; SPTR:  UvrD/REP helicase domain protein
YP_004772356.1	PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Membrane protein
YP_004772357.1	PFAM: CBS domain; COGs: COG0517 FOG: CBS domain; InterPro IPR000644; KEGG: mtt:Ftrac_2573 cbs domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: PolyA polymerase
YP_004772358.1	PFAM: CutC family; COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: pon:100444760 copper homeostasis protein cutC homolog; PFAM: CutC; SPTR: Copper homeostasis protein CutC
YP_004772359.1	PFAM: Asparaginase; COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: saz:Sama_0299 asparaginase; PFAM: Peptidase T2, asparaginase 2; SPTR:N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginas e
YP_004772360.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: zpr:ZPR_4698 ROK family transcriptional repressor protein; PFAM: ROK; SPTR:  glucokinase
YP_004772361.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: ppn:Palpr_2723 glucosamine/galactosamine-6-phosphate isomerase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR:  glucosamine-6-phosphate isomerase 2
YP_004772362.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: bfr:BF1751 transcriptional regulator; PFAM: ROK; SPTR: ROK family protein
YP_004772363.1	PFAM: PAP2 superfamily; KEGG: hypothetical protein; SPTR:  phosphoesterase, PA-phosphatase related protein
YP_004772364.1	PFAM: Protein of unknown function (DUF1349); COGs: COG3506 conserved hypothetical protein; InterPro IPR009784; KEGG: cpi:Cpin_1749 hypothetical protein; PFAM: Protein of unknown function DUF1349; SPTR:  uncharacterized protein
YP_004772365.1	KEGG: zpr:ZPR_1636 aminotransferase class IV family protein; SPTR: Aminotransferase class IV family protein
YP_004772366.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: zpr:ZPR_1637 aminotransferase, class IV superfamily; PFAM: Aminotransferase, class IV; SPTR: Aminotransferase, class IV superfamily
YP_004772367.1	PFAM: Kelch motif; InterPro IPR006652; KEGG: dfe:Dfer_4451 kelch repeat-containing protein; PFAM: Kelch repeat type 1; SPTR: Kelch repeat-containing protein
YP_004772369.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR004450; KEGG: chu:CHU_0075 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Threonine synthase; TIGRFAM: Threonine synthase
YP_004772370.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase; COGs: COG0083 Homoserine kinase; HAMAP: Homoserine kinase; InterPro IPR006204:IPR013750:IPR000870; KEGG: chu:CHU_0074 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: Homoserine kinase; TIGRFAM: Homoserine kinase
YP_004772371.1	PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; COGs: COG0527 Aspartokinase; InterProIPR001048:IPR002912:IPR005106:IPR001342:IPR 001341; KEGG: chu:CHU_0073 bifunctional aspartokinase I/homoserine dehydrogenase I; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding; SPTR: Aspartokinase I/homoserine dehydrogenase, threonine-sensitive; TIGRFAM: Aspartate kinase region
YP_004772372.1	PFAM: Protein of unknown function (DUF2807); KEGG: mtt:Ftrac_2798 hypothetical protein; SPTR:  uncharacterized protein
YP_004772373.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: mtt:Ftrac_2838 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR:  oxidoreductase, short chain dehydrogenase/reductase
YP_004772374.1	PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: shg:Sph21_3444 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Transporter, small conductance mechanosensitive ion channel (MscS) family
YP_004772375.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: cao:Celal_1010 methylated-DNA/protein-cysteinemethyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004772376.1	PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: Undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Capsular polysaccharide biosynthesis protein
YP_004772377.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: mtt:Ftrac_2951 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Sodium:solute symporter family protein
YP_004772378.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; InterPro IPR003769; KEGG: chu:CHU_1046 hypothetical protein; PFAM: Adaptor protein ClpS, core; SPTR: ATP-dependent Clp protease adaptor protein ClpS
YP_004772379.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: Recombination protein recR; InterPro IPR006154:IPR015967:IPR000093; KEGG: chu:CHU_1045 recombination protein RecR; SMART: Toprim domain, subgroup; SPTR: Recombination protein recR; TIGRFAM: RecR protein
YP_004772380.1	KEGG: vcn:VOLCADRAFT_88866 hypothetical protein; SPTR:  uncharacterized protein
YP_004772381.1	KEGG: psn:Pedsa_2377 hypothetical protein; SPTR:  uncharacterized protein
YP_004772382.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR006638:IPR013848:IPR007197:IPR002792:IPR 005839:IPR005840; KEGG: mtt:Ftrac_1929 SSU ribosomal protein s12p methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase
YP_004772383.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254:IPR005744; KEGG: mtt:Ftrac_0863 channel protein, hemolysin III family; PFAM: Hly-III related; SPTR: Channel protein, hemolysin III family; TIGRFAM: HylII
YP_004772384.1	PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: mtt:Ftrac_2587 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR:  uncharacterized protein
YP_004772385.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433; KEGG: mtt:Ftrac_2837 oxidoreductase fad/nad(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; SPTR:  flavodoxin reductase
YP_004772386.1	KEGG: psl:Psta_1030 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004772387.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: gfo:GFO_2628 carboxylesterase; SPTR: Esterase/lipase/thioesterase
YP_004772388.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fba:FIC_01942 4-keto.6-deoxy-N-acetyl-D-hexosaminyl-(lipid carrier) aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: 4-keto.6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase
YP_004772389.1	PFAM: Phosphoglucose isomerase; COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: vex:VEA_002341 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase
YP_004772390.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Tetratricopeptide repeat; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003594:IPR001440:IPR013105; KEGG: cao:Celal_4238 histidine kinase; PFAM: ATP-binding region, ATPase-like; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: ATP-binding region, ATPase-like; Tetratricopeptide repeat; SPTR: Histidine kinase
YP_004772391.1	KEGG: rbi:RB2501_00566 hypothetical protein; SPTR:  uncharacterized protein
YP_004772392.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR019900; KEGG: bth:BT_2813 sodium-dependent multivitamin transporter; PFAM: Sodium/solute symporter; SPTR: Sodium-dependent multivitamin transporter; TIGRFAM: Sodium/solute symporter, subgroup
YP_004772393.1	PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220; KEGG: bth:BT_2814 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase
YP_004772394.1	PFAM: BNR/Asp-box repeat; COGs: COG4692 neuraminidase (sialidase); KEGG: lby:Lbys_1885 hypothetical protein; SPTR:  uncharacterized protein
YP_004772395.1	PFAM: L-fucose isomerase, C-terminal domain; InterPro IPR012889; KEGG: psn:Pedsa_1485 L-fucose isomerase 2 domain protein; PFAM: L-fucose isomerase, N-terminal-2; SPTR: L-fucose isomerase 2 domain protein
YP_004772396.1	KEGG: pbs:Plabr_3930 FG-GAP repeat protein; SPTR:  uncharacterized protein
YP_004772397.1	PFAM: BNR/Asp-box repeat; Glycosyl hydrolases family 43; KEGG: rba:RB5143 hypothetical protein; SPTR:  uncharacterized protein
YP_004772398.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: dfe:Dfer_3162 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004772399.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004772400.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: rbi:RB2501_09095  dehydrogenase-like protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase
YP_004772401.1	PFAM: Uncharacterized conserved protein (DUF2132); COGs: COG4628 conserved hypothetical protein; InterPro IPR018668; KEGG: cat:CA2559_03420 hypothetical protein; PFAM: Protein of unknown function DUF2132; SPTR:  uncharacterized protein
YP_004772402.1	KEGG: shg:Sph21_0206 metal-dependent hydrolase; SPTR:  uncharacterized protein
YP_004772404.1	PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: dsy:DSY0022 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR:  uncharacterized protein
YP_004772407.1	KEGG: osp:Odosp_0933 hypothetical protein; SPTR:  uncharacterized protein
YP_004772408.1	PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: sua:Saut_1329 amino acid permease-associated region; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease-associated region
YP_004772409.1	KEGG: Thioredoxin domain-containing protein; SPTR: Thioredoxin (TrxA)
YP_004772410.1	PFAM: Helicase conserved C-terminal domain; UvrD/REP helicase; Viral (Superfamily 1) RNA helicase; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR014001:IPR001650:IPR011545:IPR000212:IPR 018329; KEGG: dsy:DSY0682 hypothetical protein; PFAM: DNA/RNA helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA helicase, UvrD/REP type; SMART: DNA/RNA helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal
YP_004772411.1	KEGG: pbs:Plabr_3895 hypothetical protein; SPTR:  uncharacterized protein
YP_004772412.1	PFAM: YhhN-like protein; InterPro IPR012506; KEGG: fbc:FB2170_12086 hypothetical protein; PFAM: YhhN-like; SPTR:  uncharacterized protein
YP_004772413.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: swd:Swoo_1191 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR:  uncharacterized protein
YP_004772414.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; InterPro IPR018060:IPR000005; KEGG: swd:Swoo_1190 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR:  uncharacterized protein
YP_004772415.1	KEGG: psn:Pedsa_1227 hypothetical protein; SPTR:  uncharacterized protein
YP_004772416.1	PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865:IPR000994; KEGG: mtt:Ftrac_3610 peptidase M24; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; SPTR: Xaa-Pro aminopeptidase
YP_004772417.1	KEGG: pat:Patl_3588 hypothetical protein; SPTR:  uncharacterized protein
YP_004772418.1	PFAM: Amidohydrolase; KEGG: phe:Phep_0340 amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004772419.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: phe:Phep_0338 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004772420.1	PFAM: Heparinase II/III-like protein; KEGG: phe:Phep_2409 heparinase II/III family protein; SPTR: Heparinase II/III family protein
YP_004772421.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: dfe:Dfer_4491 hypothetical protein; SPTR:  uncharacterized protein
YP_004772422.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: sli:Slin_0602 hypothetical protein; SPTR:  uncharacterized protein
YP_004772423.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1389 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004772424.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1390 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004772426.1	KEGG: cpi:Cpin_2490 hypothetical protein; SPTR:  uncharacterized protein
YP_004772427.1	PFAM: Protein of unknown function (DUF2442); InterPro IPR018841; KEGG: mtt:Ftrac_3780 hypothetical protein; PFAM: Protein of unknown function DUF2442; SPTR:  uncharacterized protein
YP_004772428.1	PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: psn:Pedsa_1010 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR: Membrane protein
YP_004772430.1	PFAM: Mannose-6-phosphate isomerase; KEGG: phe:Phep_3485 hypothetical protein; SPTR: ATP phosphoribosyltransferase
YP_004772431.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: shg:Sph21_0724 ROK family protein; PFAM: ROK; SPTR:  ROK family member transcriptional repressor
YP_004772432.1	KEGG: mtt:Ftrac_0883 outer membrane lipoprotein P61; SPTR:  uncharacterized protein
YP_004772433.1	PFAM: PspC domain; KEGG: sli:Slin_6388 hypothetical protein; SPTR:  uncharacterized protein
YP_004772434.1	PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mtt:Ftrac_1517 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family
YP_004772435.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; COGs: COG0718 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: mtt:Ftrac_1516 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein ALPR1_06800; TIGRFAM: Uncharacterised protein family UPF0133
YP_004772436.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR002314:IPR004154:IPR015807; KEGG: lby:Lbys_0603 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; manually curated
YP_004772437.1	KEGG: mtt:Ftrac_0857 hypothetical protein
YP_004772438.1	TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: wvi:Weevi_1546 phosphodiesterase, MJ0936 family; PFAM: Metallophosphoesterase; SPTR: Phosphoesterase,  subfamily; TIGRFAM: Uncharacterised protein family UPF0025
YP_004772439.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR005476; KEGG: lby:Lbys_1402 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: Pyruvate dehydrogenase complex, E1 component, beta subunit
YP_004772440.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; COGs: COG0541 Signal recognition particle GTPase; InterProIPR003593:IPR013822:IPR000897:IPR004125:IPR 004780; KEGG: mtt:Ftrac_0395 signal recognition particle subunit ffh/SRP54 (SRP54); PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP
YP_004772442.1	PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: ran:Riean_0183 hypothetical protein; PFAM: Protein of unknown function DUF11; SPTR:  uncharacterized protein; TIGRFAM: Protein of unknown function DUF11
YP_004772443.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: phe:Phep_0108 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004772444.1	PFAM: Sulfate transporter family; STAS domain; TIGRFAM: anti-anti-sigma factor; high affinity sulphate transporter 1; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645:IPR001902; KEGG: rbi:RB2501_07240 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter; TIGRFAM: Sulphate anion transporter
YP_004772445.1	PFAM: NAD dependent epimerase/dehydratase; KEGG: cao:Celal_4039 hypothetical protein; SPTR:  uncharacterized protein
YP_004772446.1	InterPro IPR018580; KEGG: mtt:Ftrac_3796 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Membrane protein
YP_004772447.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abi:Aboo_0277 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR:  uncharacterized protein
YP_004772448.1	PFAM: Vibrio cholerae RfbT protein; TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: smt:Smal_3172 FkbM family methyltransferase; SPTR: Methyltransferase FkbM family; TIGRFAM: Methyltransferase FkbM
YP_004772449.1	PFAM: PKD domain; InterPro IPR000601; KEGG: cao:Celal_1478 hypothetical protein; PFAM: PKD; SMART: PKD; SPTR: Lipoprotein
YP_004772450.1	PFAM: Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: chu:CHU_2768 membrane export protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein
YP_004772451.1	KEGG: fbc:FB2170_06740 hypothetical protein; SPTR:  uncharacterized protein
YP_004772453.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_1324 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004772454.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804:IPR014273; KEGG: tra:Trad_1633 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; SPTR: Isocitrate dehydrogenase; TIGRFAM: Isocitrate dehydrogenase bacteria
YP_004772455.1	PFAM: Enoyl-CoA hydratase/isomerase; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: mtt:Ftrac_3324 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: 3-hydroxybutyryl-CoA dehydratase
YP_004772456.1	KEGG: aas:Aasi_0804 hypothetical protein; SPTR: Polysaccharide biosynthesis protein
YP_004772457.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); COGs: COG0756 dUTPase; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; InterPro IPR008180:IPR008181; KEGG: mtt:Ftrac_3326 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1
YP_004772458.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440:IPR013105; KEGG: dfe:Dfer_3772 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR:  uncharacterized protein
YP_004772459.1	KEGG: dfe:Dfer_3773 hypothetical protein; SPTR:  uncharacterized protein
YP_004772460.1	PFAM: Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_3330 peptidase M23; PFAM: Peptidase M23; SPTR:  M23 peptidase domain protein
YP_004772461.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; COGs: COG1826 Sec-independent protein secretion pathway components; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR003369:IPR006312; KEGG: chu:CHU_0024 sec-independent protein translocase; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase tatA/E homolog; TIGRFAM: Twin-arginine translocation protein TatA/E
YP_004772462.1	PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; InterPro IPR000120:IPR004412; KEGG: mtt:Ftrac_3332 aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit A; PFAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit
YP_004772463.1	PFAM: Transglycosylase SLT domain; LysM domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR002482:IPR008258:IPR018392; KEGG: mtt:Ftrac_3333 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Membrane-bound lytic murein transglycosylase D
YP_004772464.1	KEGG: mtt:Ftrac_3334 hypothetical protein; SPTR:  uncharacterized protein
YP_004772465.1	PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: chu:CHU_0027 malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SPTR: NADP-dependent malic enzyme
YP_004772466.1	PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; InterPro IPR003583:IPR013849:IPR011114:IPR000085; KEGG: chu:CHU_0028 Holliday junction DNA helicase; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA
YP_004772467.1	KEGG: mtt:Ftrac_3337 gliding motility-related protein; SPTR: Gliding motility-related protein
YP_004772468.1	PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR002930:IPR017453; KEGG: cat:CA2559_01205 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup
YP_004772469.1	PFAM: VanZ like family; InterPro IPR006976; KEGG: lby:Lbys_3167 VanZ family protein; PFAM: VanZ like protein; SPTR: VanZ like family protein
YP_004772470.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: mtt:Ftrac_3340 outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; SPTR:  TonB protein; TIGRFAM: TonB, C-terminal
YP_004772471.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2237); COGs: COG3651 conserved hypothetical protein; InterPro IPR018714; KEGG: mms:mma_0567 hypothetical protein; PFAM: Protein of unknown function DUF2237; SPTR:  uncharacterized protein
YP_004772472.1	PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: vcn:VOLCADRAFT_74606 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR:  uncharacterized protein
YP_004772473.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR006148; KEGG: sli:Slin_6212 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: N-acetylglucosamine-6-phosphate deacetylase
YP_004772474.1	PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: psn:Pedsa_0686 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR:  sodium-coupled permease
YP_004772475.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: psn:Pedsa_1789 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein
YP_004772478.1	PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: dfe:Dfer_4494 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family
YP_004772479.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase; InterPro IPR004360:IPR019883; KEGG: cat:CA2559_09323 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; TIGRFAM: Lactoylglutathione lyase
YP_004772480.1	PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cao:Celal_0732 transcriptional regulator, hxlr family; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator, HxlR family
YP_004772481.1	PFAM: DsrE/DsrF-like family; InterPro IPR014865; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004772482.1	PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ote:Oter_1907 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase
YP_004772483.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: btk:BT9727_0681 hypothetical protein; SPTR: Alkaline ceramidase domain protein
YP_004772484.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR003088:IPR013428:IPR013427; KEGG: membrane-bound dehydrogenase domain-containing protein; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004772485.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814; KEGG: dfe:Dfer_5257 aminotransferase class-III; PFAM: Aminotransferase class-III; SPTR: Aminotransferase class-III
YP_004772486.1	KEGG: dfe:Dfer_2647 hypothetical protein; SPTR:  uncharacterized protein
YP_004772487.1	PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase
YP_004772488.1	PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: chu:CHU_0138 hypothetical protein; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR:  YicC protein; TIGRFAM: Conserved hypothetical protein CHP00255
YP_004772489.1	PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: mtt:Ftrac_1741 WD40-like beta propeller containing protein; PFAM: WD40-like Beta Propeller; SPTR:  uncharacterized protein
YP_004772490.1	PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: mtt:Ftrac_1740 fad dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glycine/D-amino acid oxidase (Deaminating)
YP_004772491.1	PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dfe:Dfer_5067 beta-lactamase domain protein; SPTR: Metallo-beta-lactamase
YP_004772492.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: shg:Sph21_4020 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol-serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_004772493.1	PFAM: Peptidase C25; KEGG: mtt:Ftrac_1737 hypothetical protein; SPTR:  uncharacterized protein
YP_004772494.1	KEGG: mtt:Ftrac_1736 hypothetical protein; SPTR:  uncharacterized protein
YP_004772495.1	PFAM: Peptidase M16 inactive domain; COGs: COG0612 Zn-dependent peptidase; InterPro IPR007863; KEGG: shg:Sph21_3675 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; SPTR:  zinc protease
YP_004772496.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_0084 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2 protein
YP_004772497.1	PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: ppn:Palpr_0468 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Thymidylate synthase
YP_004772498.1	PFAM: 3'-5' exonuclease; COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: ppn:Palpr_2743 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: 3'-5' exonuclease domain protein
YP_004772499.1	PFAM: Protein of unknown function (DUF962); COGs: COG4539 membrane protein; InterPro IPR009305; KEGG: mtt:Ftrac_0080 hypothetical protein; SPTR: Membrane protein; manually curated
YP_004772500.1	PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG4651 Kef-type K+ transport system predicted NAD-binding component; InterPro IPR006153:IPR003148:IPR006037; KEGG: mtt:Ftrac_2162 kef-type potassium/proton antiporter, cpa2 family; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Kef-type potassium/proton antiporter, CPA2 family
YP_004772501.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; InterPro IPR003699; KEGG: mtt:Ftrac_2977 S-adenosylmethionine--tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1; TIGRFAM: Queuosine biosynthesis protein
YP_004772502.1	PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2978 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, ATP-binding protein
YP_004772503.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR003593:IPR013765; KEGG: mtt:Ftrac_3374 RecA protein; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein RecA; TIGRFAM: DNA recombination and repair protein RecA
YP_004772504.1	PFAM: Protein of unknown function (DUF3108); KEGG: dfe:Dfer_0003 hypothetical protein; SPTR:  uncharacterized protein
YP_004772505.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: mtt:Ftrac_3371 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator YycF
YP_004772506.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: mtt:Ftrac_3370 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Sensory box histidine kinase PhoR
YP_004772507.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: dfe:Dfer_3759 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase
YP_004772508.1	KEGG: bvu:BVU_0765 hypothetical protein; SPTR:  uncharacterized protein
YP_004772509.1	KEGG: bfs:BF3552 hypothetical protein; SPTR:  uncharacterized protein
YP_004772510.1	KEGG: dfe:Dfer_0096 hypothetical protein; SPTR:  uncharacterized protein
YP_004772511.1	PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: mtt:Ftrac_0959 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Methylamine utilization protein MauG
YP_004772512.1	KEGG: mtt:Ftrac_0958 hypothetical protein; SPTR:  uncharacterized protein
YP_004772513.1	KEGG: cao:Celal_3163 hypothetical protein; SPTR:  uncharacterized protein
YP_004772517.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_3571 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: Peptidase, M16 family
YP_004772518.1	PFAM: O-methyltransferase; COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: mtt:Ftrac_3570 O-methyltransferase 3; PFAM: O-methyltransferase, family 3; SPTR: O-methyltransferase
YP_004772519.1	PFAM: Transglycosylase SLT domain; LysM domain; InterPro IPR002482:IPR008258:IPR018392; KEGG: mtt:Ftrac_3569 peptidoglycan-binding lysin domain; PFAM: Peptidoglycan-binding lysin domain; Lytic transglycosylase-like, catalytic; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Glycoside hydrolase 23
YP_004772520.1	PFAM: Protein of unknown function (DUF3078); KEGG: mtt:Ftrac_3567 hypothetical protein; SPTR:  uncharacterized protein
YP_004772521.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: dfe:Dfer_0576 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase
YP_004772523.1	KEGG: mtt:Ftrac_1886 hypothetical protein; SPTR:  uncharacterized protein
YP_004772524.1	PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_1887 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004772525.1	PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; COGs: COG2041 Sulfite oxidase; InterPro IPR000572:IPR005066:IPR006311; KEGG: cly:Celly_3002 sulfite oxidase; PFAM: Oxidoreductase, molybdopterin binding; Moybdenum cofactor oxidoreductase, dimerisation; SPTR: Sulfite oxidase
YP_004772526.1	KEGG: cly:Celly_3001 monoheme cytochrome c; SPTR: Monoheme cytochrome c
YP_004772527.1	PFAM: Protein of unknown function (DUF3748); KEGG: dfe:Dfer_4309 hypothetical protein; SPTR:  uncharacterized protein
YP_004772528.1	PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: shg:Sph21_2866 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31; SPTR: Glycoside hydrolase 31
YP_004772529.1	KEGG: sli:Slin_0135 hypothetical protein; SPTR:  uncharacterized protein
YP_004772530.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795:IPR004161:IPR000640:IPR005225:IPR 006298; KEGG: lby:Lbys_2768 gtp-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA/BipA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein
YP_004772531.1	PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023:IPR012828; KEGG: lby:Lbys_1517 6-phosphofructokinase; PFAM: Phosphofructokinase; SPTR: 6-phosphofructokinase 1; TIGRFAM: 6-phosphofructokinase
YP_004772532.1	SPTR:  uncharacterized protein
YP_004772533.1	PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; InterPro IPR002627:IPR018022; KEGG: mtt:Ftrac_0829 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase
YP_004772534.1	PFAM: Response regulator receiver domain; Hpt domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789:IPR008207; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: Signal transduction response regulator, receiver region; SPTR: Sensor histidine kinase/response regulator fusion protein
YP_004772535.1	PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: chu:CHU_2785 sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: CAI-1 autoinducer sensor kinase/phosphatase CqsS (Cholerae quorum-sensing sensor)
YP_004772536.1	KEGG: mtt:Ftrac_0832 hypothetical protein; SPTR:  uncharacterized protein
YP_004772537.1	PFAM: Metallo-beta-lactamase superfamily; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: mtt:Ftrac_0833 metal-dependent hydrolase; SPTR: Metal-dependent hydrolase
YP_004772538.1	PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: mtt:Ftrac_0834 hypothetical protein; PFAM: Protein of unknown function DUF814; Fibronectin-binding A, N-terminal; SPTR:  RNA-binding protein
YP_004772539.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015794:IPR001697; KEGG: mtt:Ftrac_1175 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase
YP_004772540.1	KEGG: psn:Pedsa_2758 hypothetical protein; SPTR:  uncharacterized protein
YP_004772541.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR006163:IPR003231; KEGG: mtt:Ftrac_1173 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP)
YP_004772542.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031:IPR017568; KEGG: mtt:Ftrac_1172 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_004772543.1	PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR000999:IPR001159:IPR011907; KEGG: mtt:Ftrac_1171 RNAse III; PFAM: Ribonuclease III; Double-stranded RNA binding; SMART: Ribonuclease III; Double-stranded RNA binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial
YP_004772544.1	PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; COGs: COG0171 NAD synthase; InterPro IPR003010:IPR003694; KEGG: mtt:Ftrac_1170 nad+ synthetase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR:  glutamine-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthase
YP_004772545.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: mtt:Ftrac_1169 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase
YP_004772546.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: dds:Ddes_1968 protein of unknown function DUF37; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein ALPR1_15124; TIGRFAM: Protein of unknown function DUF37; manually curated
YP_004772547.1	PFAM: Surface antigen variable number repeat; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: mtt:Ftrac_1167 surface antigen variable number repeat-containing protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR:  outer membrane protein
YP_004772548.1	KEGG: mtt:Ftrac_1165 hypothetical protein; SPTR:  uncharacterized protein
YP_004772549.1	KEGG: mtt:Ftrac_1164 hypothetical protein; SPTR:  uncharacterized protein
YP_004772550.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; COGs: COG1970 Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: tgr:Tgr7_2042 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel
YP_004772551.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase; COGs: COG1770 Protease II; InterPro IPR004106:IPR001375; KEGG: zpr:ZPR_2342 S9 family peptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Oligopeptidase B
YP_004772552.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: cpf:CPF_1021 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: DNA-binding protein
YP_004772554.1	KEGG: wvi:Weevi_0140 hypothetical protein; SPTR:  uncharacterized protein
YP_004772555.1	KEGG: dal:Dalk_3577 B transposition protein domain protein; SPTR:  uncharacterized protein
YP_004772557.1	manually curated
YP_004772559.1	KEGG: osp:Odosp_0820 hypothetical protein; SPTR: ATP-dependent serine protease
YP_004772561.1	PFAM: Protein of unknown function (DUF3164); KEGG: osp:Odosp_0814 hypothetical protein; SPTR:  uncharacterized protein
YP_004772566.1	KEGG: bpi:BPLAN_340 hypothetical protein; SPTR:  uncharacterized protein
YP_004772571.1	KEGG: bcu:BCAH820_4400 hypothetical protein; SPTR:  uncharacterized protein
YP_004772572.1	KEGG: mpo:Mpop_2745 hypothetical protein; SPTR:  uncharacterized protein
YP_004772577.1	PFAM: Phage virion morphogenesis family; KEGG: psn:Pedsa_0954 hypothetical protein; SPTR:  uncharacterized protein
YP_004772578.1	PFAM: Phage Mu protein F like protein; KEGG: wvi:Weevi_0123 phage head morphogenesis protein, SPP1 gp7 family; SPTR: Predicted protein
YP_004772579.1	PFAM: Protein of unknown function (DUF935); COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: osp:Odosp_0808 phage head morphogenesis protein, SPP1 gp7 family; PFAM: Protein of unknown function DUF935; SPTR: Predicted protein
YP_004772580.1	PFAM: Carbohydrate binding domain; InterPro IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR: Glycosyl hydrolase 98  carbohydrate binding module
YP_004772581.1	KEGG: psn:Pedsa_0950 phage uncharacterized protein; SPTR: Phage uncharacterized protein
YP_004772582.1	PFAM:  ATPase subunit of terminase (gpP-like); KEGG: psn:Pedsa_0949 hypothetical protein; SPTR:  uncharacterized protein
YP_004772583.1	KEGG: osp:Odosp_0804 hypothetical protein; SPTR:  phage prohead protease, HK97 family
YP_004772584.1	KEGG: osp:Odosp_0803 hypothetical protein; SPTR: Predicted protein
YP_004772586.1	PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847); COGs: COG3926  secretion activating protein; InterPro IPR008565:IPR018537; KEGG: ttu:TERTU_3990 N-acetylmuramidase; PFAM: Peptidoglycan binding domain; Protein of unknown function DUF847; SPTR:  uncharacterized protein
YP_004772589.1	KEGG: wvi:Weevi_0252 hypothetical protein; SPTR:  uncharacterized protein
YP_004772596.1	KEGG: pdi:BDI_3448 hypothetical protein; SPTR:  uncharacterized protein
YP_004772597.1	PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404); COGs: COG2308 conserved hypothetical protein; InterPro IPR007297:IPR007302; KEGG: cao:Celal_3919 hypothetical protein; PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; SPTR: UDP-N-acetylmuramate dehydrogenase
YP_004772598.1	PFAM: Bacterial domain of unknown function (DUF403); COGs: COG2307 conserved hypothetical protein; InterPro IPR007296; KEGG: cts:Ctha_2388 hypothetical protein; PFAM: Protein of unknown function DUF403, bacteria; SPTR:  uncharacterized protein
YP_004772599.1	PFAM: Proteasome subunit; COGs: COG3484 proteasome-type protease; InterPro IPR001353; KEGG: cts:Ctha_2387 proteasome-type protease; PFAM: Proteasome, subunit alpha/beta; SPTR: Proteasome-type protease
YP_004772600.1	PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931:IPR013589; KEGG: cyj:Cyan7822_1273 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; Bacterial transglutaminase-like, N-terminal; SMART: Transglutaminase-like; SPTR: Transglutaminase domain protein
YP_004772601.1	PFAM: Calcineurin-like phosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: gfo:GFO_0142 metallophosphoesterase domain-containing protein; PFAM: Metallophosphoesterase; SPTR:  uncharacterized protein
YP_004772602.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_3517 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR:  cation efflux system
YP_004772603.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_3518 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR:  cation efflux system protein; TIGRFAM: Secretion protein HlyD
YP_004772604.1	PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: ppd:Ppro_2208 sulphate transporter; PFAM: Sulphate transporter; SPTR: Sulphate transporter
YP_004772605.1	COGs: COG2367 Beta-lactamase class A; KEGG: sli:Slin_5194 beta-lactamase; SPTR:  beta-lactamase
YP_004772606.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR001898; KEGG: pmu:PM1585 hypothetical protein; PFAM: Divalent ion symporter; SPTR:  uncharacterized protein; TIGRFAM: Sodium/sulphate symporter
YP_004772608.1	PFAM: Fic/DOC family; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: ssm:Spirs_0418 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Filamentation induced by cAMP protein Fic
YP_004772610.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG4951 conserved hypothetical protein; InterPro IPR014001:IPR002755:IPR006935; KEGG: smb:smi_0394 DNA or RNA helicases of superfamily II; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA primase, small subunit; SMART: DEAD-like helicase, N-terminal; SPTR: Type III restriction enzyme, res subunit:DEAD/DEAH box helicase
YP_004772613.1	PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329  transposase; SPTR:  transposase
YP_004772614.1	InterPro IPR006626; KEGG: fbc:FB2170_01552 hypothetical protein; SPTR:  uncharacterized protein
YP_004772615.1	PFAM: AIG2-like family; InterPro IPR009288; KEGG: dre:406278 gamma-glutamyl cyclotransferase; PFAM: AIG2-like; SPTR: Uncharacterized protein
YP_004772618.1	PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: sli:Slin_1052 YdjC family protein; PFAM: YdjC-like protein; SPTR: YdjC-like protein
YP_004772619.1	KEGG: ses:SARI_03986 hypothetical protein; SPTR:  uncharacterized protein
YP_004772621.1	KEGG: npu:Npun_R1178 hypothetical protein; SPTR:  uncharacterized protein
YP_004772624.1	PFAM: RimK-like ATP-grasp domain; Acetyltransferase (GNAT) family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR000182:IPR013651; KEGG: dsa:Desal_2904 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ATP-grasp fold, RimK-type; SPTR: GCN5-related N-acetyltransferase
YP_004772625.1	KEGG: sna:Snas_5935 hypothetical protein; SPTR:  uncharacterized protein
YP_004772629.1	PFAM: Cobalamin-independent synthase, Catalytic domain; COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR002629; KEGG: dat:HRM2_34760 MetE; PFAM: Methionine synthase, vitamin-B12 independent; SPTR: MetE
YP_004772630.1	KEGG: fjo:Fjoh_4072 hypothetical protein; SPTR: Hypothetical lipoprotein
YP_004772631.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_4071 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004772632.1	KEGG: cts:Ctha_0375 hypothetical protein; SPTR:  uncharacterized protein
YP_004772633.1	KEGG: rbi:RB2501_03395 hypothetical protein; SPTR:  uncharacterized protein
YP_004772634.1	PFAM: SpoU rRNA Methylase; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: sli:Slin_0993 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: RNA methyltransferase, TrmH family
YP_004772635.1	PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: mtt:Ftrac_1558 surface antigen (d15); PFAM: Bacterial surface antigen (D15); SPTR: Outer membrane protein
YP_004772636.1	PFAM: Coproporphyrinogen III oxidase; COGs: COG0408 Coproporphyrinogen III oxidase; InterPro IPR001260; KEGG: sli:Slin_2294 coproporphyrinogen oxidase; PFAM: Coproporphyrinogen III oxidase; SPTR: Coproporphyrinogen III oxidase, aerobic
YP_004772637.1	PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: mtt:Ftrac_1489 phosphoesterase pa-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Membrane-associated phospholipid phosphatase
YP_004772638.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: dfe:Dfer_2926 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein
YP_004772639.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; InterPro IPR000682; KEGG: mtt:Ftrac_1423 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004772640.1	PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: mtt:Ftrac_3096 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase domain protein
YP_004772641.1	KEGG: phe:Phep_0491 hypothetical protein; SPTR:  uncharacterized protein
YP_004772642.1	TIGRFAM: integral membrane protein; KEGG: bcl:ABC3955 hypothetical protein; SPTR: Hypothetical Membrane Spanning Protein
YP_004772643.1	KEGG: mtt:Ftrac_1843 hypothetical protein; SPTR:  uncharacterized protein
YP_004772644.1	PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: mtt:Ftrac_2175 ferritin dps family protein; PFAM: Ferritin/Dps protein; SPTR: Ferritin Dps family protein
YP_004772645.1	InterPro IPR001611; KEGG: mtt:Ftrac_0519 hypothetical protein; SPTR:  uncharacterized protein
YP_004772646.1	KEGG: mtt:Ftrac_0520 hypothetical protein; SPTR:  uncharacterized protein
YP_004772647.1	KEGG: mtt:Ftrac_0521 hypothetical protein; SPTR:  uncharacterized protein
YP_004772648.1	KEGG: mtt:Ftrac_0522 hypothetical protein; SPTR: Histone-lysine N-methyltransferase pr-Set7
YP_004772649.1	PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: mtt:Ftrac_2913 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Cytochrome c biogenesis protein
YP_004772650.1	PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; InterPro IPR004413:IPR006075:IPR006107:IPR018027; KEGG: chu:CHU_1447 aspartyl/glutamyl-tRNA amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit
YP_004772651.1	PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR002318:IPR018164:IPR012947:IPR003156; KEGG: mtt:Ftrac_2911 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SPTR: Alanine--tRNA ligase; TIGRFAM: Alanyl-tRNA synthetase, class IIc
YP_004772652.1	PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_2910 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23
YP_004772653.1	InterPro IPR000551; KEGG: mtt:Ftrac_2908 transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator
YP_004772654.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: sli:Slin_2383 DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; SPTR:  DNA processing protein DprA; TIGRFAM: DNA recombination-mediator protein A
YP_004772655.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004772656.1	PFAM: Peptidase M23; Bacterial SH3 domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: sli:Slin_6234 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23
YP_004772657.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693  intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: psn:Pedsa_3443 intracellular protease, PfpI family; PFAM: ThiJ/PfpI; SPTR: Intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI
YP_004772658.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: mtt:Ftrac_1425 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain
YP_004772659.1	PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated  ABC transporter substrate-binding component GldG; InterPro IPR019863:IPR019196; KEGG: aas:Aasi_0220 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding-associated  ABC transporter substrate-binding component GldG; TIGRFAM: Gliding-associated  ABC transporter substrate-binding GldG
YP_004772660.1	TIGRFAM: gliding motility-associated ABC transporter permease GldF; InterPro IPR019860; KEGG: dfe:Dfer_4470 ABC transporter permease; gliding motility-associated protein; SPTR: Gliding motility-associated ABC transporter permease GldF; TIGRFAM: Gliding motility-associated ABC transporter permease GldF
YP_004772661.1	PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR019864:IPR003593:IPR003439; KEGG: mtt:Ftrac_1432 protein involved in gliding motility glda; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Gliding motility-associated ABC transporter ATP-binding subunit GldA; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA
YP_004772662.1	PFAM: Phosphoglycerate kinase; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: dfe:Dfer_2700 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase
YP_004772663.1	PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009  translation factor (SUA5); InterPro IPR004388:IPR006070:IPR005145; KEGG: Sua5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5; SPTR: Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC
YP_004772664.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_3527 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR:  tetratricopeptide TPR_2
YP_004772665.1	PFAM: NUDIX domain; InterPro IPR000086; KEGG: xac:XAC1843 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase, NUDIX family
YP_004772666.1	KEGG: mtt:Ftrac_2258 hypothetical protein; SPTR:  uncharacterized protein
YP_004772667.1	PFAM: Helicase conserved C-terminal domain; Iron dependent repressor, N-terminal DNA binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR018329:IPR014001:IPR001650:IPR011545; KEGG: mtt:Ftrac_1364 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, N-terminal
YP_004772668.1	PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: mtt:Ftrac_1367 ComEC/rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR:  ComEC/Rec2 family protein; TIGRFAM: ComEC/Rec2-related protein
YP_004772669.1	KEGG: gfo:GFO_3403 secreted protein; SPTR: Secreted protein
YP_004772670.1	PFAM: Acetyltransferase (GNAT) family; COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: mtt:Ftrac_1368 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase
YP_004772671.1	PFAM: PhoH-like protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: mtt:Ftrac_1369 PhoH family protein; PFAM: PhoH-like protein; SPTR: PhoH family protein
YP_004772672.1	PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: chu:CHU_2970 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR:  uncharacterized protein
YP_004772673.1	KEGG: mtt:Ftrac_1391 N-6 DNA methylase; SPTR: N-6 DNA methylase
YP_004772675.1	PFAM: Abi-like protein; COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: fps:FP0069 hypothetical protein; PFAM: Abortive infection bacteriophage resistance related; SPTR:  uncharacterized protein
YP_004772677.1	KEGG: lby:Lbys_3582 hypothetical protein; SPTR:  uncharacterized protein
YP_004772679.1	PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: rma:Rmag_0129 membrane bound O-acyl transferase, MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Membrane bound O-acyl transferase, MBOAT family protein
YP_004772680.1	PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: mtt:Ftrac_1494 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR:  uncharacterized protein
YP_004772681.1	PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM:  heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013427:IPR004155; KEGG: dfe:Dfer_0143 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Heme-binding protein; TIGRFAM:  haem-binding region
YP_004772682.1	PFAM: Phosphoadenosine phosphosulfate reductase; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: hch:HCH_04016 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase-like protein; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzyme
YP_004772683.1	PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: dfe:Dfer_1165 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR:  transport protein
YP_004772684.1	KEGG: mtt:Ftrac_1592 spheroidene monooxygenase; SPTR: Spheroidene monooxygenase; manually curated
YP_004772685.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058; KEGG: ccv:CCV52592_0507 glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs); PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR:  glutamyl-Q tRNA(Asp) synthetase
YP_004772686.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: dfe:Dfer_5258 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR:  oxidoreductase
YP_004772687.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: lby:Lbys_1767 xylose isomerase domaiN-containing protein tim barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain-containing protein TIM barrel
YP_004772688.1	PFAM: Glycosyl transferase 4; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: mtt:Ftrac_2655 hypothetical protein; PFAM: Glycosyl transferase, family 4, conserved region; SPTR:  undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase
YP_004772689.1	KEGG: shg:Sph21_1808 hypothetical protein; SPTR:  uncharacterized protein
YP_004772690.1	PFAM: Glycosyltransferase 28 C-terminal domain; COGs: COG5017 conserved hypothetical protein; InterPro IPR007235; KEGG: sse:Ssed_2976 hypothetical protein; PFAM: Glycosyl transferase, family 28, C-terminal; SPTR: WcnO
YP_004772691.1	PFAM: Oligosaccharide biosynthesis protein Alg14 like; InterPro IPR013969; KEGG: sse:Ssed_2977 hypothetical protein; PFAM: Oligosaccharide biosynthesis protein Alg14 like; SPTR: N terminus subunit of GlcA transferase
YP_004772692.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: mjl:Mjls_0960 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2
YP_004772693.1	PFAM: O-Antigen ligase; KEGG: sku:Sulku_2128 O-antigen polymerase; SPTR: O-antigen polymerase
YP_004772694.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ssm:Spirs_4256 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004772695.1	PFAM: Chain length determinant protein; InterPro IPR003856; KEGG: pdi:BDI_1145  protein involved in capsular polysaccharide biosynthesis; PFAM: Lipopolysaccharide biosynthesis; SPTR:  uncharacterized protein
YP_004772696.1	PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: shg:Sph21_2017 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase
YP_004772697.1	PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: psn:Pedsa_3227 polysaccharide export protein; PFAM: Soluble ligand binding domain; Polysaccharide export protein; SPTR:  polysaccharide biosynthesis protein
YP_004772698.1	PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368:IPR001509; KEGG: psn:Pedsa_3226 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_004772699.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: zpr:ZPR_0544 GDP-fucose synthetase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-L-fucose synthase
YP_004772700.1	PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835:IPR001538; KEGG: fjo:Fjoh_0355 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal; SPTR: ATP phosphoribosyltransferase
YP_004772701.1	PFAM: Transcription termination factor nusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645; KEGG: phe:Phep_3892 NGN domain-containing protein; PFAM: Transcription antitermination protein, NusG, N-terminal; SPTR: NusG antitermination factor
YP_004772702.1	PFAM: Glycosyl hydrolases family 15; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: psn:Pedsa_2994 glycoside hydrolase 15-related protein; PFAM: Glycoside hydrolase 15-related; SPTR: Glycosyl hydrolase, family 15
YP_004772703.1	KEGG: cly:Celly_1525 hypothetical protein; SPTR:  uncharacterized protein
YP_004772704.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: zpr:ZPR_4015 single-stranded DNA-binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding
YP_004772705.1	PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: cja:CJA_3530 Tat (twin-arginine translocation) pathway signal sequence domain protein; PFAM: Stress responsive alpha-beta barrel; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein
YP_004772706.1	PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease hslV; InterPro IPR001353; KEGG: mtt:Ftrac_0741 ATP dependent peptidase codwx, codw component; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent protease subunit HslV; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit
YP_004772707.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR006257:IPR000089:IPR004167:IPR001078; KEGG: mtt:Ftrac_0743 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: Dihydrolipoamide acetyltransferase, long form
YP_004772708.1	PFAM: alpha/beta hydrolase fold; COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: caa:Caka_2610 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase
YP_004772709.1	PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: chu:CHU_1864 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR:  uncharacterized protein
YP_004772710.1	PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: wvi:Weevi_1684 beta-lactamase; SPTR: Beta-lactamase domain protein
YP_004772711.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: sli:Slin_2458 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004772712.1	PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: O-antigen export system, permease
YP_004772713.1	PFAM: ABC transporter; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: Teichoic-acid-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein
YP_004772714.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyn:Cyan7425_1730 family 2 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004772715.1	PFAM: Methyltransferase domain; Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173:IPR013216; KEGG: met:M446_3307 glycosyl transferase; PFAM: Glycosyl transferase, family 2; Methyltransferase type 11; SPTR: Glycosyl transferase 2
YP_004772716.1	PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: sli:Slin_2459 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase
YP_004772717.1	PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: sli:Slin_2462 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004772718.1	PFAM: Exostosin family; KEGG: dat:HRM2_08030 hypothetical protein; SPTR:  uncharacterized protein
YP_004772719.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_2029 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein
YP_004772720.1	PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: ate:Athe_0062 undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_004772721.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: zpr:ZPR_1092 Ptk-like tyrosine-protein kinase; SPTR:  tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein
YP_004772722.1	KEGG: dol:Dole_1834 hypothetical protein; SPTR:  uncharacterized protein
YP_004772723.1	PFAM: Sulfotransferase domain; InterPro IPR000863; KEGG: amr:AM1_5716 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase domain-containing protein
YP_004772724.1	PFAM: Protein of unknown function (DUF354); COGs: COG1817 conserved hypothetical protein; InterPro IPR007152; KEGG: mbu:Mbur_0720 hypothetical protein; PFAM: Protein of unknown function DUF354; SPTR:  uncharacterized protein
YP_004772725.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: app:CAP2UW1_0858 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: GDP-mannose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase
YP_004772726.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_1126 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR:  uncharacterized protein
YP_004772727.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; KEGG: ppn:Palpr_1126 glycosyl transferase group 1; SPTR:  uncharacterized protein
YP_004772728.1	PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: pdi:BDI_0038 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR:  uncharacterized protein
YP_004772729.1	COGs: COG5653 Protein involved in cellulose biosynthesis (CelD)
YP_004772730.1	SPTR:  uncharacterized protein
YP_004772731.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dtu:Dtur_0587 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004772732.1	PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; Fibronectin type III domain; InterPro IPR006652:IPR003961:IPR006558:IPR008009; KEGG: rbi:RB2501_12909 ring canal kelch-like protein; PFAM: Fibronectin, type III; Ig; Kelch repeat type 1; SMART: LamG-like jellyroll fold; Kelch repeat type 1; Fibronectin, type III; SPTR: Ring canal kelch-like protein
YP_004772733.1	InterPro IPR006558; KEGG: gvi:gll4265 hypothetical protein; SMART: LamG-like jellyroll fold; SPTR:  lipoprotein
YP_004772734.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ppn:Palpr_1129 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: WfaY protein
YP_004772735.1	KEGG: gvi:gll4265 hypothetical protein; SPTR: Gll4265 protein
YP_004772736.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pdi:BDI_0033 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase 4
YP_004772737.1	PFAM: Polysaccharide pyruvyl transferase; KEGG: dfe:Dfer_0060 hypothetical protein; SPTR:  uncharacterized protein
YP_004772738.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_2029 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein
YP_004772739.1	PFAM: Bacterial Ig-like domain (group 2); Fibronectin type III domain; COGs: COG5492 Bacterial surface protein containing Ig-like domains; InterPro IPR003343:IPR003961; KEGG: dae:Dtox_1961 Ig domain-containing protein group 2 domain-containing protein; PFAM: Bacterial Ig-like, group 2; Fibronectin, type III; SMART: Bacterial Ig-like, group 2; Fibronectin, type III; SPTR: Ig domain protein group 2 domain protein
YP_004772741.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: mtt:Ftrac_0753 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 2; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH)
YP_004772742.1	SPTR:  uncharacterized protein
YP_004772743.1	PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: chu:CHU_2455 glucosyltransferase-S; SPTR:  uncharacterized protein
YP_004772744.1	KEGG: mtt:Ftrac_0750 hypothetical protein; SPTR:  uncharacterized protein
YP_004772745.1	KEGG: shg:Sph21_3033 hypothetical protein; SPTR:  uncharacterized protein
YP_004772746.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable IolI protein
YP_004772748.1	KEGG: mtt:Ftrac_3437 hypothetical protein; SPTR:  outer membrane insertion C-signal
YP_004772749.1	KEGG: chu:CHU_1567 hypothetical protein; SPTR:  uncharacterized protein
YP_004772750.1	PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: lby:Lbys_2903 transcriptional regulator, PadR family; PFAM: Transcriptional regulator PadR N-terminal-like; SPTR: Transcriptional regulator, PadR family
YP_004772751.1	PFAM: PspC domain; InterPro IPR007168; KEGG: mtt:Ftrac_1338 phage shock protein C, PspC; PFAM: PspC; SPTR: PspC domain protein
YP_004772752.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: mtt:Ftrac_1340 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Metallo-beta-lactamase
YP_004772753.1	KEGG: geo:Geob_3254 hypothetical protein; SPTR:  uncharacterized protein
YP_004772754.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: dfe:Dfer_3459 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004772755.1	SPTR:  uncharacterized protein
YP_004772756.1	KEGG: dfe:Dfer_3457 hypothetical protein; SPTR:  uncharacterized protein
YP_004772757.1	KEGG: acl:ACL_1380 hypothetical protein; SPTR:  uncharacterized protein
YP_004772758.1	SPTR:  uncharacterized protein
YP_004772759.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: mtt:Ftrac_1596 oxidoreductase fad/nad(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin; SPTR: Phenylacetate-CoA oxygenase/reductase, PaaK subunit
YP_004772760.1	KEGG: cpi:Cpin_5822 hypothetical protein; SPTR:  uncharacterized protein
YP_004772761.1	PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR000362:IPR013539; KEGG: lby:Lbys_2961 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal; Fumarate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; manually curated
YP_004772762.1	PFAM: Heparinase II/III-like protein; InterPro IPR012480; KEGG: amr:AM1_1276 hypothetical protein; PFAM: Heparinase II/III-like; SPTR:  uncharacterized protein
YP_004772763.1	SPTR:  uncharacterized protein
YP_004772764.1	KEGG: zpr:ZPR_1182 hypothetical protein; SPTR:  uncharacterized protein
YP_004772765.1	SPTR:  uncharacterized protein
YP_004772766.1	PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: gfo:GFO_2349 band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: SPFH domain / Band 7 family protein
YP_004772767.1	PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: sli:Slin_3437 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1
YP_004772768.1	PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: slt:Slit_1240 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel
YP_004772769.1	PFAM: Di-glucose binding within endoplasmic reticulum; InterPro IPR006626:IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR:  uncharacterized protein
YP_004772770.1	PFAM: Di-glucose binding within endoplasmic reticulum; InterPro IPR006626; KEGG: parallel beta-helix repeat-containing protein; SPTR: Glycosyl hydrolase 98  carbohydrate binding module; TIGRFAM: parallel beta-helix repeat containing protein
YP_004772771.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family
YP_004772772.1	PFAM: Exostosin family; KEGG: rmr:Rmar_1143 hypothetical protein; SPTR: Predicted protein
YP_004772773.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bvu:BVU_0890  glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR:  uncharacterized protein
YP_004772774.1	PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: vcj:VCD_003407 N-acetylmannosaminyltransferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; SPTR: Beta-1,4-N-acetyl-mannosaminyltransferase, ; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF
YP_004772775.1	KEGG: bvu:BVU_1546 hypothetical protein; SPTR:  uncharacterized protein
YP_004772776.1	KEGG: pth:PTH_2582 glycosyltransferase; SPTR:  glycosyltransferase
YP_004772777.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Zinc-binding dehydrogenase; COGs: COG0673 dehydrogenase and related protein; InterPro IPR013149:IPR000683; KEGG: aba:Acid345_3794 zinc-binding alcohol dehydrogenase; PFAM: Oxidoreductase, N-terminal; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase, zinc-binding protein
YP_004772778.1	KEGG: bfr:BF4506  glycosyltransferase; SPTR:  exopolysaccharide biosynthesis protein
YP_004772779.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR:  uncharacterized protein
YP_004772781.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004772782.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: group 1 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyltransferase 4
YP_004772783.1	PFAM: Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR:  LPS biosynthesis related polysaccharide transporter/flippase
YP_004772784.1	PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: shg:Sph21_1810 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; SPTR: Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein
YP_004772785.1	PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: shg:Sph21_1809 soluble ligand binding domain; PFAM: Soluble ligand binding domain; SPTR: Polysaccharide export protein
YP_004772786.1	PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: zpr:ZPR_0565 glycosyltransferase; PFAM: Bacterial sugar transferase; SPTR: Capsular polysaccharide biosynthesis protein
YP_004772788.1	PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: cat:CA2559_02960 glycosyltransferase; PFAM: Bacterial sugar transferase; SPTR:  sugar transferase
YP_004772789.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361:IPR000257; KEGG: mtt:Ftrac_1932 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE
YP_004772790.1	KEGG: fbc:FB2170_15348 hypothetical protein; SPTR:  uncharacterized protein
YP_004772791.1	KEGG: rbi:RB2501_12652 hypothetical protein; SPTR:  uncharacterized protein
YP_004772792.1	SPTR:  uncharacterized protein
YP_004772793.1	SPTR:  uncharacterized protein
YP_004772794.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: mtt:Ftrac_2126 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, permease/ATP-binding protein
YP_004772795.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: gfo:GFO_0425 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A 1; TIGRFAM: Pseudouridine synthase I, TruA
YP_004772796.1	KEGG: sli:Slin_4489 hypothetical protein; SPTR: Lipoprotein
YP_004772797.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: psn:Pedsa_1154 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine gamma-synthase
YP_004772798.1	PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: mtt:Ftrac_2564 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR:  uncharacterized protein
YP_004772799.1	PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR003593:IPR000523; KEGG: mtt:Ftrac_2624 mg chelatase, subunit chli; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Mg chelatase-like protein; TIGRFAM: Mg chelatase-related protein
YP_004772800.1	PFAM: Protein of unknown function, DUF485; SPTR:  uncharacterized protein
YP_004772801.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: mtt:Ftrac_2621 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MsbA family
YP_004772803.1	KEGG: mtt:Ftrac_2620 hypothetical protein; SPTR:  uncharacterized protein
YP_004772804.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; COGs: COG0254 Ribosomal protein L31; HAMAP: 50S ribosomal protein L31 type B; InterPro IPR002150; KEGG: aas:Aasi_0758 hypothetical protein; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31 type B; TIGRFAM: Ribosomal protein L31
YP_004772805.1	TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; InterPro IPR001451; KEGG: mtt:Ftrac_2618 transferase hexapeptide repeat containing protein; SPTR:  uncharacterized protein
YP_004772806.1	TIGRFAM: DNA polymerase III, delta' subunit; COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: chu:CHU_0491 DNA polymerase III gamma/tau subunit; SPTR: DNA polymerase III gamma/tau subunit
YP_004772807.1	PFAM: Protein of unknown function (DUF785); COGs: COG4067 conserved hypothetical protein; InterPro IPR008503; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF785; SPTR: Ribosomal protein S6 modification protein
YP_004772808.1	PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR004666:IPR013651; KEGG: mtt:Ftrac_1140 SSU ribosomal protein s6p modification protein; PFAM: ATP-grasp fold, RimK-type; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK
YP_004772809.1	PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; COGs: COG0181 Porphobilinogen deaminase; HAMAP: Porphobilinogen deaminase; InterPro IPR000860; KEGG: mtt:Ftrac_2767 hydroxymethylbilane synthase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; SPTR: Hydroxymethylbilane synthase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
YP_004772810.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: mtt:Ftrac_2768 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004772811.1	PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: mtt:Ftrac_2769 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase
YP_004772812.1	PFAM: Sodium:neurotransmitter symporter family; COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: rmr:Rmar_2112 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter
YP_004772813.1	PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: psn:Pedsa_2514 protein of unknown function DUF583; PFAM: Protein of unknown function DUF583; SPTR:  uncharacterized protein
YP_004772814.1	KEGG: osp:Odosp_0670 hypothetical protein; SPTR:  uncharacterized protein
YP_004772815.1	KEGG: mtt:Ftrac_1015 hypothetical protein; SPTR:  uncharacterized protein
YP_004772816.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: zpr:ZPR_4235 regulatory protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004772817.1	SPTR:  uncharacterized protein
YP_004772818.1	SPTR:  uncharacterized protein
YP_004772819.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_3523 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Drug efflux protein
YP_004772820.1	PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR017705:IPR006675:IPR004087:IPR003607:IPR 018111:IPR006674; KEGG: mtt:Ftrac_2866 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD region; K Homology; SPTR: KH/HDIG domain protein; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG
YP_004772821.1	PFAM: Cell division protein ZapA; KEGG: mtt:Ftrac_2867 hypothetical protein; SPTR:  uncharacterized protein
YP_004772822.1	KEGG: mtt:Ftrac_2868 hypothetical protein; SPTR:  uncharacterized protein
YP_004772823.1	PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR004532:IPR002547:IPR005146:IPR005147:IPR 005121; KEGG: sli:Slin_0287 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding region; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial
YP_004772824.1	PFAM: Protein of unknown function (DUF1684); COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: sli:Slin_0288 hypothetical protein; PFAM: Protein of unknown function DUF1684; SPTR:  secreted protein
YP_004772825.1	PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: psn:Pedsa_3781 DNA replication and repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like
YP_004772826.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: phe:Phep_0819 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20
YP_004772827.1	PFAM: S1/P1 Nuclease; KEGG: mtt:Ftrac_3091 hypothetical protein; SPTR:  uncharacterized protein
YP_004772828.1	PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: chu:CHU_0991 aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, classes I and II
YP_004772829.1	PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2855 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; TIGRFAM: ATP-binding cassette protein, ChvD family
YP_004772830.1	PFAM: Domain of Unknown Function (DUF349); InterPro IPR007139; KEGG: sli:Slin_5235 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR:  uncharacterized protein
YP_004772831.1	PFAM: Protein of unknown function (DUF2795); KEGG: dfe:Dfer_3979 hypothetical protein; SPTR:  uncharacterized protein
YP_004772832.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: cpi:Cpin_6587 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; ATP-binding region, ATPase-like; SPTR: Signal transduction histidine kinase, LytS
YP_004772833.1	PFAM: Predicted membrane protein (DUF2154); InterPro IPR016975; KEGG: mtt:Ftrac_1345 hypothetical protein; PFAM: Cell wall-active antibiotics response protein; SPTR:  uncharacterized protein
YP_004772834.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro IPR001228; KEGG: chu:CHU_3100 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_004772835.1	PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: fba:FIC_02393 Mn-dependent transcriptional regulator MntR; PFAM: Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Iron repressor protein
YP_004772836.1	PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: coc:Coch_1616 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: GufA protein
YP_004772837.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: shg:Sph21_3869 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR:  glycerate dehydrogenase
YP_004772838.1	PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: chu:CHU_0315 aminopeptidase; PFAM: Peptidase M42; SPTR: Aminopeptidase
YP_004772839.1	KEGG: pdi:BDI_3443  lipoprotein; SPTR:  uncharacterized protein
YP_004772840.1	PFAM: haloacid dehalogenase-like hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006439:IPR005834; KEGG: pgi:PG1509 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1
YP_004772841.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); InterPro IPR008775; KEGG: cpi:Cpin_4379 hypothetical protein; PFAM: Phytanoyl-CoA dioxygenase; SPTR:  uncharacterized protein
YP_004772842.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_4378 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator
YP_004772843.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gfo:GFO_2162 secreted beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Secreted beta-lactamase
YP_004772844.1	KEGG: psn:Pedsa_1463 hypothetical protein; SPTR:  uncharacterized protein
YP_004772845.1	PFAM: EthD protein; TIGRFAM: conserved hypothetical protein; InterPro IPR009799; KEGG: bts:Btus_1238 ethyl tert-butyl ether degradation EthD; PFAM: Ethyl tert-butyl ether degradation EthD; SPTR:  uncharacterized protein; TIGRFAM: Ethyl tert-butyl ether degradation EthD
YP_004772846.1	KEGG: sus:Acid_1992 beta-lactamase; SPTR: Beta-lactamase
YP_004772847.1	InterPro IPR006626; KEGG: hch:HCH_04697 hypothetical protein; SPTR: Parallel beta-helix repeat protein
YP_004772848.1	SPTR:  uncharacterized protein
YP_004772849.1	PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR:  uncharacterized protein
YP_004772851.1	PFAM: Acetyl xylan esterase (AXE1); COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR006311; KEGG: plm:Plim_1726 hypothetical protein; SPTR:  uncharacterized protein
YP_004772852.1	KEGG: fbc:FB2170_11011 hypothetical protein; SPTR:  uncharacterized protein
YP_004772853.1	KEGG: fbc:FB2170_11016 hypothetical protein; SPTR:  uncharacterized protein
YP_004772854.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_11021  RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004772855.1	KEGG: sli:Slin_0596 hypothetical protein; SPTR:  uncharacterized protein
YP_004772856.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01941 iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase
YP_004772857.1	PFAM: Protein of unknown function (DUF1006); COGs: COG3214 conserved hypothetical protein; InterPro IPR009351; KEGG: fbc:FB2170_11296 hypothetical protein; PFAM: Protein of unknown function DUF1006; SPTR:  uncharacterized protein
YP_004772859.1	PFAM: BlaR1 peptidase M56; InterPro IPR008756; KEGG: sli:Slin_3430 peptidase M56 BlaR1; PFAM: Peptidase M56, BlaR1; SPTR: Peptidase M56 BlaR1
YP_004772860.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2719 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004772861.1	KEGG: dfe:Dfer_2720 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004772862.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rbi:RB2501_09050 outer membrane protein-like protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein-like protein
YP_004772863.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: gfo:GFO_3008 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: RND family efflux transporter
YP_004772864.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_3009 HlyD family secretion protein; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD
YP_004772865.1	PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: fbc:FB2170_08719  MarR family regulatory protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR:  MarR-family regulatory protein
YP_004772866.1	PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0531 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel
YP_004772867.1	PFAM: Lipocalin-like domain; COGs: COG3040 Bacterial lipocalin; InterPro IPR013208; KEGG: ppn:Palpr_0368 lipocalin family protein; PFAM: Lipocalin-like; SPTR: Lipocalin family protein
YP_004772868.1	PFAM: Ppx/GppA phosphatase; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: mtt:Ftrac_3065 ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Exopolyphosphatase
YP_004772869.1	PFAM: Malate/L-lactate dehydrogenase; COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: cpi:Cpin_6875 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; SPTR: Malate dehydrogenase
YP_004772870.1	COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: nmr:Nmar_0572 hypothetical protein; SPTR:  uncharacterized protein
YP_004772871.1	PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: syp:SYNPCC7002_G0123 bumetanide-sensitive Na-K-Cl cotransporter; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease
YP_004772872.1	KEGG: caa:Caka_1250 hypothetical protein; SPTR:  uncharacterized protein
YP_004772873.1	PFAM: Peptidase M13; COGs: COG3590 metalloendopeptidase; InterPro IPR008753:IPR018497; KEGG: zpr:ZPR_4568 neutral endopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal; SPTR: Neutral endopeptidase
YP_004772875.1	PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: zpr:ZPR_1445 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR:  plasmid stabilization element ParE
YP_004772876.1	PFAM: Uncharacterised protein family (UPF0156); TIGRFAM:  addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: cpb:Cphamn1_1160  addiction module antidote protein, CopG/Arc/MetJ family; PFAM:  addiction module antidote protein, CC2985; SPTR:  addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM:  addiction module antidote protein, CC2985
YP_004772878.1	KEGG: par:Psyc_1264 hypothetical protein; SPTR:  uncharacterized protein
YP_004772881.1	PFAM: DinB family; KEGG: bae:BATR1942_00360 hypothetical protein; SPTR:  uncharacterized protein
YP_004772882.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR013655:IPR008207; KEGG: lbf:LBF_0692 two component response regulator sensor histidine kinase/response regulator subunits; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; Signal transduction response regulator, receiver region; SPTR:  two-component sensor protein; TIGRFAM: PAS
YP_004772883.1	PFAM: Uncharacterised protein family (UPF0156); TIGRFAM:  addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: mtt:Ftrac_1428 addiction module antidote protein, cc2985 family; PFAM:  addiction module antidote protein, CC2985; SPTR:  addiction module antidote protein, CC2985 family; TIGRFAM:  addiction module antidote protein, CC2985
YP_004772886.1	PFAM: Serpin (serine protease inhibitor); COGs: COG4826 Serine protease inhibitor; InterPro IPR000215; KEGG: proteinase inhibitor I4 serpin; PFAM: Protease inhibitor I4, serpin; SMART: Protease inhibitor I4, serpin; SPTR: Proteinase inhibitor I4 serpin
YP_004772887.1	KEGG: pdi:BDI_3448 hypothetical protein; SPTR:  uncharacterized protein
YP_004772888.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR006311:IPR013341:IPR013342; KEGG: dfe:Dfer_1010 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein
YP_004772890.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1006 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004772891.1	KEGG: dfe:Dfer_1007 hypothetical protein; SPTR:  uncharacterized protein
YP_004772892.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: dfe:Dfer_1011 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein
YP_004772893.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR006311:IPR013341:IPR013342; KEGG: sli:Slin_3948 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein
YP_004772894.1	PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; KEGG: ppn:Palpr_1213 hypothetical protein; SPTR:  uncharacterized protein
YP_004772895.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB2701 N-acetylgalactosamine 6-sulfate sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase (GALNS)
YP_004772896.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: cly:Celly_2946 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A 2; TIGRFAM: Pseudouridine synthase I, TruA
YP_004772897.1	KEGG: mtt:Ftrac_3595 hypothetical protein; SPTR:  uncharacterized protein
YP_004772898.1	SPTR:  uncharacterized protein
YP_004772899.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; COGs: COG2814 Arabinose efflux permease; InterPro IPR003663:IPR005828; KEGG: mtt:Ftrac_1568 sugar transporter; PFAM: General substrate transporter; SPTR: Arabinose-proton symporter; TIGRFAM: Sugar/inositol transporter
YP_004772900.1	PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: cpi:Cpin_0562 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: Fructokinase
YP_004772901.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004772903.1	PFAM: Alanine racemase, N-terminal domain; COGs: COG3457 amino acid racemase; InterPro IPR001608; KEGG: mtt:Ftrac_3254 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR:  amino acid racemase
YP_004772904.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: mtt:Ftrac_3253 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family
YP_004772905.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: mtt:Ftrac_3252 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR:  sodium-solute symporter
YP_004772906.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR004489:IPR001450; KEGG: mtt:Ftrac_3251 succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Fumarate reductase, iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_004772907.1	PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280:IPR003953:IPR004112; KEGG: mtt:Ftrac_3250 succinate dehydrogenase subunit A; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; SPTR: Fumarate reductase, flavoprotein subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria
YP_004772908.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; InterPro IPR011138; KEGG: mtt:Ftrac_3249 succinate dehydrogenase subunit C; SPTR: Succinate dehydrogenase subunit C; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit
YP_004772910.1	KEGG: mtt:Ftrac_3248 hypothetical protein; SPTR:  uncharacterized protein
YP_004772911.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: mtt:Ftrac_3246 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase
YP_004772912.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: chu:CHU_2468 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inediphosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_004772913.1	PFAM: Peptidase S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004634:IPR004635:IPR002142; KEGG: mtt:Ftrac_1087 signal peptide peptidase SppA, 67k type; PFAM: Peptidase S49; SPTR: Signal peptide peptidase SppA, 67K type; TIGRFAM: Peptidase S49, protease IV; Peptidase S49, SppA
YP_004772914.1	PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: sli:Slin_4762 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004772915.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: mtt:Ftrac_0821 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase, class Ia
YP_004772916.1	PFAM: Inorganic pyrophosphatase; COGs: COG0221 Inorganic pyrophosphatase; HAMAP: Inorganic pyrophosphatase; InterPro IPR008162; KEGG: chu:CHU_3108 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; SPTR: Inorganic diphosphatase
YP_004772917.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR001789:IPR003661:IPR003594; KEGG: cpi:Cpin_1315 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Two-component system response regulator
YP_004772918.1	PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661:IPR003594:IPR011623; KEGG: dfe:Dfer_2391 diverse 7TM receptor transmembrane region; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, transmembrane region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Phosphoglycerate transport protein for signal transmission
YP_004772919.1	KEGG: dfe:Dfer_2390 hypothetical protein; SPTR:  uncharacterized protein
YP_004772920.1	PFAM: ThiF family; COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594; KEGG: chu:CHU_2794 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: UBA/THIF-type NAD/FAD binding fold protein
YP_004772921.1	PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: dfe:Dfer_2388 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Hydrogenase transcriptional regulatory protein HoxA
YP_004772922.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886:IPR007698; KEGG: mtt:Ftrac_3538 alanine dehydrogenase/pnt domain protein; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; SPTR: Alanine dehydrogenase
YP_004772923.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: sli:Slin_2993 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: ATPase; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_004772924.1	PFAM: PglZ domain; Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR013973; KEGG: sli:Slin_3042 response regulator receiver protein; PFAM: PglZ domain; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator
YP_004772925.1	PFAM: HD domain; COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR003607:IPR006674; KEGG: mtt:Ftrac_3535 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HD domain protein
YP_004772926.1	PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR020573:IPR001451; KEGG: mtt:Ftrac_3534 udp-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_004772927.1	PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; UDP-3-O-acyl N-acetylglucosamine deacetylase; InterPro IPR004463:IPR010084:IPR013114; KEGG: chu:CHU_1037 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase
YP_004772928.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451; KEGG: lby:Lbys_1661 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineo-acyltransferase; SPTR:Acyl-[acyl-carrier-protein]-UDP-N-acetylglucos amineO-acyltransferase; TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase
YP_004772929.1	PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_2685 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004772930.1	SPTR:  uncharacterized protein
YP_004772931.1	KEGG: dfe:Dfer_2844 hypothetical protein; SPTR:  uncharacterized protein
YP_004772932.1	PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; COGs: COG1193 Mismatch repair ATPase (MutS family); HAMAP: MutS2 protein; InterPro IPR007696:IPR000432:IPR002625; KEGG: sli:Slin_0268 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal; SPTR: MutS2 family protein
YP_004772933.1	KEGG: chu:CHU_2652 hypothetical protein; SPTR: Lipoprotein
YP_004772934.1	PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mtt:Ftrac_0403 hypothetical protein; PFAM: Protein of unknown function DUF58; SPTR:  uncharacterized protein
YP_004772935.1	KEGG: mtt:Ftrac_0402 hypothetical protein; SPTR:  uncharacterized protein
YP_004772936.1	PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: mtt:Ftrac_0401 von willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatA protein
YP_004772938.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: rmr:Rmar_1740 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004772939.1	PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: rca:Rcas_1499 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004772940.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; COGs: COG1350 alternative tryptophan synthase beta-subunit (paralog of TrpB); HAMAP: Tryptophan synthase beta chain; InterPro IPR006316:IPR001926; KEGG: Tryptophan synthase beta chain; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Tryptophan synthase beta chain 1; TIGRFAM: Tryptophan synthase, beta chain-like
YP_004772941.1	PFAM: ASPIC and UnbV; InterPro IPR011519:IPR013517; KEGG: ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR:  ASPIC and UnbV
YP_004772942.1	PFAM: PQQ enzyme repeat; InterPro IPR002372; KEGG: fbc:FB2170_14288 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat; SPTR:  uncharacterized protein
YP_004772943.1	KEGG: cly:Celly_2340 hypothetical protein; SPTR:  uncharacterized protein
YP_004772944.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cly:Celly_2339 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004772945.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: mtt:Ftrac_1199 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: Pyridoxal phosphate enzyme, YggS family; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type
YP_004772946.1	PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: mtt:Ftrac_1200 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR:  uncharacterized protein
YP_004772947.1	PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: phe:Phep_4287 peptidase S13 D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR:  D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
YP_004772948.1	PFAM: LD-carboxypeptidase; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: psu:Psesu_1569 peptidase U61 LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR:  muramoyltetrapeptide carboxypeptidase
YP_004772949.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: gfo:GFO_2395 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; SPTR: Lipoprotein
YP_004772950.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fjo:Fjoh_3356 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004772951.1	PFAM: YqcI/YcgG family; COGs: COG3403 conserved hypothetical protein; InterPro IPR014988; KEGG: gfo:GFO_1924 hypothetical protein; PFAM: Protein of unknown function, YqcI/YcgG; SPTR:  uncharacterized protein
YP_004772952.1	PFAM: Domain of unknown function (DUF1989); COGs: COG3665 conserved hypothetical protein; InterPro IPR018959; KEGG: gfo:GFO_0003 hypothetical protein; PFAM: Domain of unknown function DUF1989; SPTR:  uncharacterized protein
YP_004772953.1	PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: mtt:Ftrac_0888 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Lipoprotein
YP_004772954.1	PFAM: Uncharacterized conserved protein (DUF2075); COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593; KEGG: mtt:Ftrac_0889 ATP-dependent exodnase (exonuclease v); SMART: ATPase, AAA+ type, core; SPTR:  helicase
YP_004772955.1	PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: sli:Slin_1463 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase
YP_004772956.1	KEGG: mtt:Ftrac_0892 hypothetical protein; SPTR:  uncharacterized protein
YP_004772957.1	KEGG: fbc:FB2170_15188 hypothetical protein; SPTR:  uncharacterized protein
YP_004772958.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004821:IPR001980:IPR004820; KEGG: mtt:Ftrac_0894 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related
YP_004772959.1	PFAM: NUDIX domain; InterPro IPR000086; KEGG: mtt:Ftrac_3481 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR:  hydrolase, NUDIX family
YP_004772960.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; COGs: COG0461 Orotate phosphoribosyltransferase; HAMAP: Orotate phosphoribosyltransferase; InterPro IPR004467:IPR000836; KEGG: mtt:Ftrac_1363 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase
YP_004772961.1	PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; InterPro IPR014127; KEGG: mtt:Ftrac_3217 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757
YP_004772962.1	SPTR:  uncharacterized protein
YP_004772963.1	PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR004548:IPR005225:IPR000795; KEGG: mtt:Ftrac_2846 bacterial peptide chain release factor 3 (brf-3); PFAM: Protein synthesis factor, GTP-binding; SPTR: Peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein
YP_004772964.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: dfe:Dfer_3776 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase
YP_004772965.1	PFAM: GumN protein; COGs: COG3735 conserved hypothetical protein; InterPro IPR010891; KEGG: sli:Slin_6313 GumN family protein; PFAM: GumN; SPTR: GumN family protein
YP_004772966.1	PFAM: SNARE associated Golgi protein; InterPro IPR015414; KEGG: lby:Lbys_2900 SNARE associated golgi proteiN-like protein; PFAM: SNARE associated Golgi protein; SPTR:  uncharacterized protein
YP_004772967.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: mtt:Ftrac_3758 cystathionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine beta-lyase
YP_004772968.1	SPTR:  uncharacterized protein
YP_004772969.1	PFAM: Smr domain; InterPro IPR002625; KEGG: dfe:Dfer_2585 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SPTR:  Smr domain protein
YP_004772970.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR002300:IPR013155; KEGG: mtt:Ftrac_1194 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class Ia; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial
YP_004772971.1	KEGG: chu:CHU_0917 hypothetical protein; SPTR:  uncharacterized protein
YP_004772972.1	PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0701 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein
YP_004772973.1	PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR000182:IPR003010; KEGG: chu:CHU_2523 carbon-nitrogen hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; GCN5-related N-acetyltransferase; SPTR: Hydrolase, carbon-nitrogen family
YP_004772974.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549:IPR005834; KEGG: tcx:Tcr_0976 phosphatase KdsC; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: 3-deoxy-manno-octulosonate-8-phosphatase; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA
YP_004772975.1	PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; InterPro IPR006269:IPR006218; KEGG: hya:HY04AAS1_1603 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase
YP_004772976.1	PFAM:  peptidoglycan binding domain; L,D-transpeptidase catalytic domain; COGs: COG2989 conserved hypothetical protein; InterPro IPR002477:IPR005490; KEGG: cli:Clim_2069 peptidoglycan-binding domain 1 protein; PFAM: YkuD domain; Peptidoglycan binding-like; SPTR:  peptidoglycan binding protein
YP_004772977.1	KEGG: paa:Paes_1896 hypothetical protein; SPTR:  secreted protein
YP_004772979.1	PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: dfe:Dfer_0467 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl tetrahydrobiopterin synthase
YP_004772980.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: mtt:Ftrac_0670 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I
YP_004772981.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_1007 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004772982.1	KEGG: mtt:Ftrac_0674 hypothetical protein; SPTR:  uncharacterized protein
YP_004772983.1	KEGG: mtt:Ftrac_0672 hypothetical protein; SPTR:  uncharacterized protein
YP_004772984.1	PFAM: Flavin reductase like domain; KEGG: fps:FP2040 hypothetical protein; SPTR:  uncharacterized protein
YP_004772985.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254; KEGG: mtt:Ftrac_3090 HtrA2 peptidase; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: HtrA protein
YP_004772986.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR013512:IPR013644; KEGG: mtt:Ftrac_2872 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004772987.1	PFAM: Peptidase M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387:IPR001478:IPR008915; KEGG: mtt:Ftrac_2871 site-2 protease; PFAM: Peptidase M50; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: RIP metalloprotease RseP; TIGRFAM: Peptidase M50,  membrane-associated zinc metallopeptidase
YP_004772988.1	PFAM: ATP-dependent protease La (LON) domain; ATPase associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269; KEGG: mtt:Ftrac_0807 ATP-dependent protease la; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La
YP_004772989.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; InterPro IPR004491:IPR003593:IPR013093:IPR019489; KEGG: mtt:Ftrac_0809 heat shock protein hslvu, atpase subunit HslU; PFAM: ATPase associated with various cellular activities, AAA-2; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: Heat shock protein HslU
YP_004772990.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274:IPR000674; KEGG: aba:Acid345_1932 isoquinoline 1-oxidoreductase; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; SPTR: Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_004772991.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: aba:Acid345_1931 (2Fe-2S)-binding protein; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding protein
YP_004772992.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: mtt:Ftrac_3199 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 1; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH)
YP_004772993.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR011768:IPR013185:IPR001059:IPR015365; KEGG: mtt:Ftrac_3200 translation elongation factor p (ef-p); PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P
YP_004772994.1	PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR000089; KEGG: mtt:Ftrac_3201 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier
YP_004772995.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR004549:IPR005481:IPR005479:IPR005482; KEGG: mtt:Ftrac_3202 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase subunit; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; manually curated
YP_004772997.1	PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_1595 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: Xanthan lyase
YP_004772998.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR010869; KEGG: dfe:Dfer_1594 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: Twin-arginine translocation pathway signal
YP_004772999.1	PFAM: Planctomycete cytochrome C; InterPro IPR011429:IPR001611; KEGG: dfe:Dfer_1976 planctomycete cytochrome c; PFAM: Cytochrome C, Planctomycete; Leucine-rich repeat; SPTR:  uncharacterized protein
YP_004773000.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated
YP_004773001.1	SPTR:  uncharacterized protein
YP_004773002.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: mtt:Ftrac_0939 branched chain amino acid aminotransferase apoenzyme; PFAM: Aminotransferase, class IV; SPTR: Branched-chain-amino-acid transaminase; TIGRFAM: Branched-chain amino acid aminotransferase II
YP_004773003.1	PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779; KEGG: ATP/cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; SPTR: ATP:corrinoid adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal
YP_004773004.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_3760 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR:  macrolide efflux ABC transporter, ATP-binding protein
YP_004773005.1	KEGG: mtt:Ftrac_3469 hypothetical protein; SPTR:  uncharacterized protein
YP_004773006.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; InterPro IPR003837; KEGG: mtt:Ftrac_3468 aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase, C subunit; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit
YP_004773007.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mtt:Ftrac_3467 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_004773008.1	PFAM: Peptidase S49; NfeD-like; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002142:IPR002810; KEGG: mtt:Ftrac_3215 hypothetical protein; PFAM: Nodulation efficiency, NfeD; Peptidase S49; SPTR: Serine protease, ClpP class
YP_004773009.1	PFAM: LysM domain; InterPro IPR002482:IPR018392; KEGG: mtt:Ftrac_3216 peptidoglycan-binding lysin domain; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding LysM
YP_004773010.1	PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: mtt:Ftrac_3196 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA
YP_004773011.1	PFAM: Uncharacterized ACR, COG1399; InterPro IPR003772; KEGG: mtt:Ftrac_3197 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR:  uncharacterized protein
YP_004773012.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; COGs: COG0333 Ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: mtt:Ftrac_3198 LSU ribosomal protein l32p; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p
YP_004773013.1	KEGG: bpi:BPLAN_568 hypothetical protein; SPTR:  uncharacterized protein
YP_004773014.1	PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: cao:Celal_3379 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; SPTR: 2-isopropylmalate synthase
YP_004773015.1	COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_04535 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase
YP_004773016.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004773017.1	PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006504:IPR006660; KEGG: mmw:Mmwyl1_1267 arsenate reductase-like protein; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; TIGRFAM: Conserved hypothetical protein, ArsC related
YP_004773018.1	InterPro IPR019734; KEGG: dfe:Dfer_1713 TPR repeat-containing protein; SPTR: TPR repeat-containing protein
YP_004773019.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; InterPro IPR004639:IPR005814; KEGG: dfe:Dfer_1148 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase
YP_004773020.1	PFAM: Receptor family ligand binding region; InterPro IPR001828; KEGG: chu:CHU_0935 hypothetical protein; PFAM: Extracellular ligand-binding receptor; SPTR:  uncharacterized protein
YP_004773021.1	PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase [glutamine-hydrolyzing]; InterPro IPR004739:IPR001674:IPR000991:IPR018318; KEGG: chu:CHU_0934 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal
YP_004773022.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase
YP_004773023.1	PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: mtt:Ftrac_3190 histidine triad (hit) protein; PFAM: Histidine triad (HIT) protein; SPTR: HIT family protein
YP_004773024.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR006359:IPR001437; KEGG: dfe:Dfer_4815 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: Transcription elongation factor greA 2; TIGRFAM: Prokaryotic transcription elongation factor GreA
YP_004773026.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: mtt:Ftrac_3193 D-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: Phosphoglycerate dehydrogenase; manually curated
YP_004773027.1	PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006669:IPR000644:IPR006668:IPR006667; KEGG: mtt:Ftrac_3194 magnesium transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region; SPTR: Magnesium transporter; TIGRFAM: Divalent cation transporter
YP_004773028.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR011530:IPR020598:IPR001737; KEGG: mtt:Ftrac_3195 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Dimethyladenosine transferase; TIGRFAM: Ribosomal RNA adenine dimethylase
YP_004773029.1	PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; COGs: COG0797 Lipoprotein; InterPro IPR012997:IPR005132; KEGG: cli:Clim_2366 rare lipoprotein A; PFAM: Rare lipoprotein A; SPTR: Rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial
YP_004773030.1	PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD; COGs: COG0420 DNA repair exonuclease; InterPro IPR004593:IPR004843; KEGG: psn:Pedsa_0559 nuclease SbcCD, D subunit; PFAM: Metallophosphoesterase; SPTR: DNA repair exonuclease; TIGRFAM: Exonuclease SbcD
YP_004773031.1	TIGRFAM: exonuclease SbcC; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: dfe:Dfer_3418 SMC domain protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR:  RecF/RecN/SMC N domain protein
YP_004773032.1	PFAM: Glycosyl hydrolase 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: osp:Odosp_0295 alpha-amylase; PFAM: Glycoside hydrolase, family 57, core; SPTR:  alpha-amylase
YP_004773033.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR013534:IPR001296; KEGG: osp:Odosp_0294 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; Starch synthase catalytic region; SPTR: Glycosyl transferase, group 1 family
YP_004773034.1	PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, COGs: COG3408 Glycogen debranching protein; InterPro IPR006451:IPR010401; KEGG: osp:Odosp_0293 glycogen debranching enzyme; PFAM: Amylo-alpha-1,6-glucosidase; SPTR: Glycogen debranching enzyme-related protein; TIGRFAM: Glycogen debranching enzyme, archaeal type
YP_004773036.1	PFAM: Amidohydrolase; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: psn:Pedsa_1710 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase
YP_004773037.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: sli:Slin_5691 DEAD/DEAH box helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR:  ATP-dependent RNA helicase
YP_004773038.1	PFAM:  esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: cly:Celly_2190 esterase; PFAM:  esterase; SPTR: Esterase
YP_004773039.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: sus:Acid_7006 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR:  uncharacterized protein
YP_004773040.1	KEGG: fjo:Fjoh_0739 hypothetical protein; SPTR:  uncharacterized protein
YP_004773041.1	KEGG: dfe:Dfer_3061 hypothetical protein; SPTR:  uncharacterized protein
YP_004773042.1	PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: mtt:Ftrac_1998 peptidase M28; PFAM: Peptidase M28; SPTR:  peptidase M28
YP_004773043.1	PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P-protein; InterPro IPR003437:IPR020580; KEGG: mtt:Ftrac_1997 glycine dehydrogenase (decarboxylating) beta subunit; glycine dehydrogenase (decarboxylating) alpha subunit; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating]; TIGRFAM: Glycine cleavage system P-protein
YP_004773044.1	PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II; COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase class II; InterPro IPR005677:IPR000362:IPR018951; KEGG: psn:Pedsa_3291 fumarase; PFAM: Fumarate lyase; Fumarase C, C-terminal; SPTR: Fumarate hydratase, class II; TIGRFAM: Fumarate hydratase, class II
YP_004773045.1	KEGG: mtt:Ftrac_2233 hypothetical protein; SPTR:  uncharacterized protein
YP_004773046.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: mtt:Ftrac_2234 endoribonuclease L-psp; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: YjgF-like protein
YP_004773047.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: dfe:Dfer_3651 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator RprY
YP_004773048.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_4094 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Sensor protein RprX
YP_004773049.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986:IPR000183; KEGG: mtt:Ftrac_2161 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase
YP_004773052.1	TIGRFAM: siroheme synthase, N-terminal domain; COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: gfo:GFO_0329 siroheme synthase; SPTR: Siroheme synthase; TIGRFAM: Sirohaem synthase, N-terminal
YP_004773053.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: fjo:Fjoh_1505 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrinogen-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal
YP_004773054.1	PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117:IPR006067; KEGG: gfo:GFO_0327 ferredoxin-sulfite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; SPTR: Sulfite reductase (NADPH)
YP_004773055.1	PFAM: Phosphoadenosine phosphosulfate reductase; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR004511:IPR011798:IPR002500; KEGG: fjo:Fjoh_1501 adenylylsulfate reductase, thioredoxin dependent; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: ATP synthase F0, A subunit; TIGRFAM: Adenylylsulphate reductase, thioredoxin dependent; Phosphoadenosine phosphosulphate reductase CysH-type
YP_004773056.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cpi:Cpin_2027 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2
YP_004773057.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594:IPR020576; KEGG: phe:Phep_0051 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SPTR: Heat shock protein HtpG
YP_004773058.1	InterPro IPR005195; KEGG: hut:Huta_2700 alpha/beta hydrolase domain-containing protein; PFAM: Glycoside hydrolase 65, central catalytic; SPTR: Alpha/beta hydrolase domain-containing protein
YP_004773059.1	PFAM: SnoaL-like polyketide cyclase; COGs: COG4922 conserved hypothetical protein; InterPro IPR009959; KEGG: cao:Celal_1891 hypothetical protein; PFAM: Protein of unknown function DUF1486; SPTR: SnoaL-like polyketide cyclase
YP_004773060.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro IPR002591; KEGG: mtt:Ftrac_3067 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR:  alkaline phosphatase, probable
YP_004773061.1	KEGG: chu:CHU_0707 hypothetical protein; SPTR:  uncharacterized protein
YP_004773062.1	PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mtt:Ftrac_1840 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Arsenical resistance operon repressor
YP_004773063.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR011951:IPR006439:IPR005834; KEGG: mtt:Ftrac_1841 had superfamily (subfamily ia) hydrolase, tigr02254; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1
YP_004773064.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: mtt:Ftrac_3126 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1
YP_004773065.1	PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; COGs: COG1621 Beta-fructosidase (levanase/invertase); InterPro IPR001362:IPR013148:IPR013189; KEGG: Fructan beta-fructosidase; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase 32, C-terminal; SMART: Glycoside hydrolase, family 32; SPTR: Levanase
YP_004773066.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: mtt:Ftrac_2651 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Sensor histidine kinase
YP_004773067.1	COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: mtt:Ftrac_2425 ABC transporter permease; SPTR:  ABC transporter, permease
YP_004773068.1	PFAM: ABC transporter; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fjo:Fjoh_5049 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004773069.1	KEGG: mtt:Ftrac_1942 hypothetical protein; SPTR:  uncharacterized protein
YP_004773070.1	PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone protein dnaJ; InterPro IPR012724:IPR001623:IPR001305:IPR002939; KEGG: mtt:Ftrac_1941 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein DnaJ; TIGRFAM: Chaperone DnaJ
YP_004773071.1	PFAM: GrpE; COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: dfe:Dfer_4974 GrpE protein; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE
YP_004773072.1	PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; COGs: COG0536 GTPase; HAMAP: GTPase obg; InterPro IPR014100:IPR006169:IPR002917; KEGG: mtt:Ftrac_1939 GTP-binding protein obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA
YP_004773073.1	PFAM: Adenylate kinase; TIGRFAM: adenylate kinases; COGs: COG0563 Adenylate kinase and related kinase; HAMAP: Adenylate kinase; InterPro IPR006259:IPR000850; KEGG: mtt:Ftrac_1938 adenylate kinase; PFAM: Adenylate kinase; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily
YP_004773074.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904:IPR000836; KEGG: bvu:BVU_1681  hypoxanthine guanine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR:  uncharacterized protein; TIGRFAM: Hypoxanthine phosphoribosyl transferase
YP_004773075.1	PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR002933; KEGG: mtt:Ftrac_1936 peptidase M20; PFAM: Peptidase M20; SPTR: Aminopeptidase, M42 family
YP_004773076.1	PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: fjo:Fjoh_3415 OmpA/MotB domain-containing protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR:  thrombospondin type 3 repeat:OmpA/MotB
YP_004773077.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: sli:Slin_5853 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase
YP_004773078.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: mtt:Ftrac_1934 Na+/ca+ antiporter, caca family; PFAM: Sodium/calcium exchanger membrane region; SPTR: K+-dependent Na+/Ca+ exchanger-like protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like
YP_004773079.1	KEGG: sli:Slin_5175 hypothetical protein; SPTR:  uncharacterized protein
YP_004773080.1	KEGG: psn:Pedsa_2602 peptidylprolyl isomerase FKBP-type; SPTR: Peptidylprolyl isomerase FKBP-type
YP_004773081.1	KEGG: psn:Pedsa_2112 hypothetical protein; SPTR:  uncharacterized protein
YP_004773082.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: psn:Pedsa_2111 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004773083.1	KEGG: sli:Slin_0445 hypothetical protein; SPTR:  uncharacterized protein
YP_004773084.1	PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; COGs: COG0320 Lipoate synthase; HAMAP: Lipoate synthase; InterPro IPR003698:IPR006638:IPR007197; KEGG: mtt:Ftrac_2810 lipoic acid synthetase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: Lipoate synthase
YP_004773085.1	KEGG: chu:CHU_3666 hypothetical protein; SPTR:  uncharacterized protein
YP_004773086.1	PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610:IPR001667:IPR003156; KEGG: mtt:Ftrac_1440 exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease
YP_004773087.1	PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_1441 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004773088.1	PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: mtt:Ftrac_1442 gh3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter family protein
YP_004773089.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: mtt:Ftrac_2796 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG,  catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial
YP_004773090.1	KEGG: mtt:Ftrac_2797 membrane or secreted protein; SPTR:  uncharacterized protein
YP_004773091.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: mtt:Ftrac_2642 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase
YP_004773092.1	PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: lby:Lbys_2866 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase
YP_004773093.1	PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: Serine racemase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Pyridoxal-phosphate dependent enzyme
YP_004773094.1	PFAM: Peptidase M23; InterPro IPR016047; KEGG: mtt:Ftrac_0459 peptidase M23; PFAM: Peptidase M23; SPTR: M23/M37 peptidase/aminotransferase, class III
YP_004773095.1	PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933; KEGG: csa:Csal_1797 peptidase M20D, amidohydrolase; PFAM: Peptidase M20; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase
YP_004773096.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821:IPR001608:IPR011079; KEGG: mtt:Ftrac_3256 alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; SPTR: Alanine racemase 1; TIGRFAM: Alanine racemase
YP_004773097.1	PFAM: META domain; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: chl:Chy400_1574 hypothetical protein; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR:  uncharacterized protein
YP_004773098.1	PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR004810:IPR002912:IPR002376; KEGG: ppn:Palpr_2909 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; SPTR: Formyltetrahydrofolate deformylase; TIGRFAM: Formyltetrahydrofolate deformylase
YP_004773099.1	PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001:IPR001650:IPR000330; KEGG: mtt:Ftrac_2608 SNF2-related protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Snf2 family protein
YP_004773100.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2607 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Membrane protein
YP_004773101.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: mtt:Ftrac_2606 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A
YP_004773102.1	KEGG: mtt:Ftrac_2605 hypothetical protein; SPTR:  uncharacterized protein
YP_004773103.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: mtt:Ftrac_2617 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B
YP_004773104.1	PFAM: Sec-independent protein translocase (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822:IPR002033; KEGG: mtt:Ftrac_3133 sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Twin arginine-targeting protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC
YP_004773105.1	PFAM: Serine hydroxymethyltransferase; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: mtt:Ftrac_3134 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; SPTR: Glycine hydroxymethyltransferase
YP_004773106.1	SPTR: UDP-glucuronosyltransferase 2B8
YP_004773107.1	PFAM: Membrane transport protein; COGs: COG0679 permease; InterPro IPR004776; KEGG: fjo:Fjoh_5018 auxin efflux carrier; PFAM: Auxin efflux carrier; SPTR:  uncharacterized protein
YP_004773108.1	PFAM: AsmA family; KEGG: chu:CHU_0135 outer membrane integrity protein; SPTR:  membrane spanning protein, required for outer membrane integrity
YP_004773109.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; COGs: COG2085 dinucleotide-binding protein; InterPro IPR004455; KEGG: sus:Acid_3142 NADP oxidoreductase, coenzyme F420-dependent; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: NADP oxidoreductase coenzyme F420-dependent superfamily
YP_004773110.1	PFAM: Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase; InterPro IPR000760; KEGG: mtt:Ftrac_2001 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol-phosphate phosphatase
YP_004773111.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR008189:IPR000878; KEGG: dfe:Dfer_4999 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Ribosomal RNA small subunit methyltransferase I; TIGRFAM: Uncharacterised protein family UPF0011
YP_004773112.1	PFAM: Pterin 4 alpha carbinolamine dehydratase; COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: mtt:Ftrac_2004 pterin-4-alpha-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; SPTR: Pterin-4-alpha-carbinolamine dehydratase
YP_004773113.1	PFAM: Protein of unknown function (DUF493); KEGG: mtt:Ftrac_2005 hypothetical protein; SPTR:  uncharacterized protein
YP_004773114.1	PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: mtt:Ftrac_2006 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR:  peptidyl-prolyl cis-trans isomerase
YP_004773115.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: mtt:Ftrac_2007 cbs domain containing protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SPTR: CBS domain protein
YP_004773116.1	SPTR:  uncharacterized protein
YP_004773117.1	PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: mtt:Ftrac_2008 hypothetical protein; PFAM: Protein of unknown function DUF1239; SPTR: Lipoprotein
YP_004773118.1	KEGG: mtt:Ftrac_2009 hypothetical protein; SPTR:  uncharacterized protein
YP_004773119.1	KEGG: mtt:Ftrac_2010 hypothetical protein; SPTR:  uncharacterized protein
YP_004773120.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG1521  transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: mtt:Ftrac_2011 transcriptional acitvator, baf family; PFAM: Bordetella pertussis Bvg accessory factor; SPTR: Type III pantothenate kinase 1; TIGRFAM: Bordetella pertussis Bvg accessory factor
YP_004773121.1	PFAM: Uncharacterised protein family (UPF0075); COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: fba:FIC_01306 anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase; SPTR: Anhydro-N-acetylmuramic acid kinase
YP_004773122.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_2013 glu/leu/phe/val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase
YP_004773123.1	PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: mtt:Ftrac_2014 transporter, uit6 family; PFAM: Divalent ion symporter; SPTR:  citrate transporter
YP_004773124.1	KEGG: lby:Lbys_0463 hypothetical protein; SPTR:  uncharacterized protein
YP_004773125.1	PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR005995:IPR011258:IPR006124; KEGG: chu:CHU_3731 phosphoglyceromutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; manually curated
YP_004773126.1	KEGG: bfs:BF1399 hypothetical protein; SPTR:  uncharacterized protein
YP_004773127.1	PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR002638; KEGG: mtt:Ftrac_2356 nicotinate-nucleotide pyrophosphorylase (carboxylating); PFAM: Quinolinate phosphoribosyl transferase; SPTR: Nicotinate-nucleotide diphosphorylase (Carboxylating); TIGRFAM: Nicotinate-nucleotide pyrophosphorylase
YP_004773128.1	PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC transporter, permease/ATP-binding protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: mtt:Ftrac_2501 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: Efflux ABC transporter, permease/ATP-binding protein
YP_004773129.1	KEGG: dfe:Dfer_3777 conserved hypothetical protein, membrane; SPTR:  uncharacterized protein
YP_004773130.1	PFAM: Amino acid kinase; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048; KEGG: cpi:Cpin_6874 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase region
YP_004773131.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: mtt:Ftrac_2508 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004773132.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_2509 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR:  uncharacterized protein
YP_004773133.1	PFAM: Bacterial protein of unknown function (DUF839); COGs: COG3211 phosphatase; InterPro IPR008557; KEGG: cse:Cseg_1676 hypothetical protein; PFAM: Protein of unknown function DUF839, bacterial; SPTR:  uncharacterized protein
YP_004773134.1	KEGG: rba:RB12464 potassium channel protein; SPTR: Similar to potassium channel protein
YP_004773135.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: fbc:FB2170_16846 hypothetical protein; PFAM: Lipase, GDSL; SPTR:  uncharacterized protein
YP_004773136.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATP synthase gamma chain; InterPro IPR000131; KEGG: chu:CHU_0184 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit
YP_004773137.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR005294:IPR004100:IPR000194:IPR000793; KEGG: sli:Slin_6523 ATP synthase F1 subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit
YP_004773138.1	PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: mtt:Ftrac_2570 ATP synthase f1, delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit delta; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit
YP_004773139.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATP synthase subunit b; InterPro IPR005864:IPR002146; KEGG: zpr:ZPR_0063 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: ATP synthase subunit b; TIGRFAM: ATPase, F0 complex, subunit B, bacterial
YP_004773140.1	PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; HAMAP: ATPase, F0 complex, subunit C; InterPro IPR005953:IPR000454:IPR002379; KEGG: sli:Slin_3215 ATP synthase F0 C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: ATP synthase subunit C; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast
YP_004773141.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATP synthase subunit a; InterPro IPR000568; KEGG: aas:Aasi_0061 ATP synthase F0 subunit A; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A
YP_004773142.1	KEGG: dfe:Dfer_5026 hypothetical protein; SPTR:  uncharacterized protein
YP_004773143.1	SPTR:  uncharacterized protein
YP_004773144.1	PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: mtt:Ftrac_2564 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR:  uncharacterized protein
YP_004773145.1	PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_2563 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23
YP_004773146.1	InterPro IPR019734; KEGG: mtt:Ftrac_2562 tetratricopeptide tpr_1 repeat-containing protein; SPTR: Gliding motility-related protein TPR repeat-containing protein; manually curated
YP_004773147.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460; KEGG: mtt:Ftrac_2561 peptidoglycan glycosyltransferase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR:  penicillin-binding protein 1A; manually curated
YP_004773148.1	PFAM: UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: UvrABC system protein C; InterPro IPR004791:IPR000305:IPR001162; KEGG: mtt:Ftrac_2560 excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC subunit C; TIGRFAM: Excinuclease ABC, C subunit
YP_004773149.1	TIGRFAM: gliding motility associated protein GldN; InterPro IPR019847; KEGG: mtt:Ftrac_2559 gliding motility associated protein gldn; SPTR: Gliding motility associated protein GldN subfamily; TIGRFAM: Gliding motility associated protein GldN
YP_004773150.1	PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: chu:CHU_0173 gliding motility-like protein; SPTR: Gliding motility-related protein; TIGRFAM: Gliding motility-associated protein GldM
YP_004773151.1	TIGRFAM: gliding motility-associated protein GldL; InterPro IPR019852; KEGG: mtt:Ftrac_2557 protein involved in gliding motility gldl; SPTR: Gliding motility-related protein; TIGRFAM: Gliding motility-associated protein, GldL
YP_004773152.1	PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK; COGs: COG1262 conserved hypothetical protein; InterPro IPR019867:IPR005532; KEGG: chu:CHU_0171 gliding motility-like protein; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldK; TIGRFAM: Gliding motility-associated lipoprotein GldK, short form
YP_004773153.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: sli:Slin_3226 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004773154.1	PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: mtt:Ftrac_2554 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Uroporphyrinogen-III synthase
YP_004773155.1	KEGG: lby:Lbys_1727 hypothetical protein; SPTR:  flippase
YP_004773156.1	PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: chu:CHU_0166 outer membrane protein; PFAM: Bacterial surface antigen (D15); SPTR:  outer membrane protein
YP_004773157.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: dfe:Dfer_4750 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR:  gluconolactonase
YP_004773158.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM:  oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR004559:IPR006638:IPR007197:IPR010723; KEGG: mtt:Ftrac_2551 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR:  oxygen-independent coproporphyrinogen III oxidase; TIGRFAM:  oxygen-independent coproporphyrinogen III oxidase
YP_004773159.1	PFAM: Protein of unknown function (DUF721); InterPro IPR007922; KEGG: dfe:Dfer_2709 protein of unknown function DUF721; PFAM: Protein of unknown function DUF721; SPTR:  uncharacterized protein
YP_004773160.1	PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: aldehyde dehydrogenase (NADP(+)); PFAM: Aldehyde dehydrogenase; SPTR: NADP-dependent fatty aldehyde dehydrogenase
YP_004773161.1	PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Dipeptidase; manually curated
YP_004773162.1	KEGG: mtt:Ftrac_2802 ATP/GTP-binding protein; SPTR:  periplasmic ATP/GTP-binding protein
YP_004773163.1	PFAM: Fatty acid desaturase; InterPro IPR005067; KEGG: acyl-(acyl-carrier-protein) desaturase; PFAM: Fatty acid desaturase, type 2; SPTR: Stearoyl-CoA 9-desaturase superfamily
YP_004773164.1	KEGG: fbc:FB2170_12831 hypothetical protein; SPTR:  uncharacterized protein
YP_004773165.1	PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR018329:IPR006293:IPR014001:IPR001650:IPR 002121:IPR011545:IPR018982; KEGG: gbm:Gbem_3690 ATP-dependent DNA helicase RecQ; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal
YP_004773166.1	KEGG: mtt:Ftrac_1357 hypothetical protein; SPTR:  uncharacterized protein
YP_004773167.1	PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho; COGs: COG1158 Transcription termination factor; InterProIPR004665:IPR011129:IPR003593:IPR011112:IPR 011113:IPR000194; KEGG: mtt:Ftrac_2790 transcription termination factor rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho
YP_004773168.1	PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: lby:Lbys_1735 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR:  permease
YP_004773169.1	KEGG: zpr:ZPR_1594 hypothetical protein; SPTR:  uncharacterized protein
YP_004773170.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: pbs:Plabr_3101 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase
YP_004773171.1	COGs: COG2378 transcriptional regulator protein; KEGG: Phytanoyl-CoA dioxygenase; SPTR:  uncharacterized protein
YP_004773172.1	PFAM: Uncharacterized protein family UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: hypothetical protein; PFAM: Uncharacterised protein family UPF0027; SPTR:  uncharacterized protein
YP_004773173.1	PFAM: Glycosyl hydrolases family 43; KEGG: beta-galactosidase I; SPTR: Beta-galactosidase I
YP_004773174.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4717 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004773175.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4718 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004773176.1	PFAM: Trehalose utilisation; KEGG: pbs:Plabr_3359 signal peptide domain-containing protein; SPTR:  uncharacterized protein
YP_004773177.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_1263 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: D-Tagatose 3-epimerase
YP_004773178.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: dfe:Dfer_3172 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773179.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sli:Slin_1265 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein
YP_004773180.1	KEGG: dat:HRM2_08410 multidrug resistance protein (efflux pump/antiporter); SPTR: Multidrug resistance protein (Efflux pump/antiporter)
YP_004773181.1	InterPro IPR013517; KEGG: dfe:Dfer_1655 FG-GAP repeat-containing protein; PFAM: FG-GAP; SPTR:  uncharacterized protein
YP_004773182.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_0979 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004773183.1	PFAM: Cupin superfamily (DUF985); COGs: COG3542 conserved hypothetical protein; InterPro IPR009327; KEGG: zpr:ZPR_1700 hypothetical protein; PFAM: Protein of unknown function DUF985; SPTR:  uncharacterized protein
YP_004773184.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3983 Iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate sulfatase
YP_004773185.1	PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic; COGs: COG1273 conserved hypothetical protein; HAMAP: DNA repair protein; InterPro IPR009187:IPR006164; KEGG: gfo:GFO_0299 Ku70/Ku80 domain-containing protein; PFAM: DNA helicase, ATP-dependent, Ku type; SMART: DNA helicase, ATP-dependent, Ku type; SPTR: Probable DNA repair protein GFO_0299; TIGRFAM: Ku, prokaryotic type
YP_004773186.1	PFAM: ATP dependent DNA ligase domain; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA polymerase LigD, polymerase domain; DNA ligase D, 3'-phosphoesterase domain; COGs: COG3285 eukaryotic-type DNA primase; InterProIPR014144:IPR014146:IPR014143:IPR014145:IPR 012310:IPR012309:IPR002755; KEGG: zpr:ZPR_3654 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; DNA primase, small subunit; SPTR: ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase region; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain
YP_004773187.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693  intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: cpi:Cpin_7251 intracellular protease, PfpI family; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI family protein; TIGRFAM: Peptidase C56, PfpI
YP_004773188.1	PFAM: Bestrophin; COGs: COG3781 membrane protein; InterPro IPR007913; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773189.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: zpr:ZPR_2068 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Membrane protein; manually curated
YP_004773190.1	PFAM: Domain of unknown function (DUF1083); InterPro IPR010502; KEGG: sur:STAUR_3356 hypothetical protein; SPTR: Conserved uncharacterized protein
YP_004773191.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein; PFAM: Lipase, GDSL; SPTR:  uncharacterized protein
YP_004773192.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cly:Celly_2950 winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
YP_004773193.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: cao:Celal_4142 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Sensory box histidine kinase
YP_004773194.1	PFAM: Spondin_N; KEGG: scl:sce6628  secreted protein; SPTR:  uncharacterized protein
YP_004773195.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003594:IPR013656:IPR 013767:IPR013655; KEGG: cly:Celly_3194 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-4; PAS fold-3; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; SPTR:  sensor histidine kinase; TIGRFAM: PAS
YP_004773196.1	PFAM: Small Multidrug Resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Quaternary ammonium compound-resistance protein SugE
YP_004773197.1	PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; KEGG: fba:FIC_01029 adenine specific DNA methyltransferase; SPTR: Adenine specific DNA methyltransferase
YP_004773200.1	KEGG: npu:Npun_R5806 hypothetical protein; SPTR:  uncharacterized protein
YP_004773202.1	COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: cpi:Cpin_5711 XRE family transcriptional regulator; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family
YP_004773203.1	PFAM: Protein of unknown function (DUF3036); KEGG: cpi:Cpin_5710 hypothetical protein; SPTR:  uncharacterized protein
YP_004773204.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: dfe:Dfer_4566 Fur family transcriptional regulator protein; SPTR: Ferric uptake regulator family protein
YP_004773205.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_3288 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  uncharacterized protein
YP_004773206.1	KEGG: fjo:Fjoh_3287 hypothetical protein; SPTR: Hypothetical lipoprotein
YP_004773208.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bth:BT_0753  anti-sigma factor; PFAM: FecR protein; SPTR:  uncharacterized protein
YP_004773209.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: bhl:Bache_0097 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004773210.1	PFAM: SusD family; InterPro IPR012944; KEGG: bhl:Bache_0096 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004773211.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cat:CA2559_00465 transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator
YP_004773212.1	KEGG: cly:Celly_1706 hypothetical protein; SPTR:  uncharacterized protein
YP_004773213.1	PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mtt:Ftrac_2633 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family
YP_004773214.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase; InterPro IPR017867; KEGG: rba:RB11147 arsenate reductase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Probable arsenate reductase
YP_004773215.1	PFAM: Cytochrome C biogenesis protein transmembrane region; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834; KEGG: lbf:LBF_3183 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR: Thiol:disulfide interchange protein DsbD (Precursor)
YP_004773216.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR004706:IPR002657; KEGG: cly:Celly_0109 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3
YP_004773217.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; InterPro IPR004843; KEGG: metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004773218.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_2652 N-acetylgalactosamine 6-sulfatase (GALNS); PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfatase (GALNS)
YP_004773219.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG5616 integral membrane protein; InterPro IPR000005:IPR019734:IPR018060; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Adenylate cyclase; Cya3
YP_004773220.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR:  quinone oxidoreductase
YP_004773221.1	InterPro IPR001611; KEGG: fbc:FB2170_11006 hypothetical protein; PFAM: Leucine-rich repeat; SPTR:  uncharacterized protein
YP_004773222.1	KEGG: zpr:ZPR_2890 hypothetical protein; SPTR:  uncharacterized protein
YP_004773223.1	PFAM: Domain of unknown function (DUF1919); COGs: COG3955 Exopolysaccharide biosynthesis protein; InterPro IPR015037; KEGG: snp:SPAP_0382  acetyl transferase; PFAM: Protein of unknown function DUF1919; SPTR:  acetyl transferase
YP_004773224.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; PFAM: Lipase, GDSL; SPTR: Ester hydrolase
YP_004773225.1	KEGG: gbe:GbCGDNIH1_1154 hypothetical protein; SPTR:  uncharacterized protein
YP_004773226.1	PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein TetR
YP_004773227.1	PFAM: Zinc-binding dehydrogenase; COGs: COG2130  NADP-dependent oxidoreductase; InterPro IPR013149; KEGG: mtt:Ftrac_2344 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; SPTR: YfmJ
YP_004773228.1	PFAM: Protein of unknown function (DUF1275); COGs: COG3619 membrane protein; InterPro IPR010699; KEGG: zpr:ZPR_1420 hypothetical protein; PFAM: Protein of unknown function DUF1275; SPTR: Hypothetical membrane protein
YP_004773229.1	PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cao:Celal_2699 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Possible Transcriptional Regulator, TetR family protein
YP_004773230.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cao:Celal_0068 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004773231.1	KEGG: cao:Celal_3915 hypothetical protein; SPTR:  uncharacterized protein
YP_004773232.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: phe:Phep_2825 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004773233.1	PFAM:  esterase; InterPro IPR000801; KEGG: dfe:Dfer_1714  esterase; PFAM:  esterase; SPTR:  esterase
YP_004773234.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: rba:RB7871 signal peptide; SPTR:  uncharacterized protein
YP_004773235.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: psn:Pedsa_1796 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family
YP_004773236.1	PFAM: SusD family; InterPro IPR012944; KEGG: psn:Pedsa_2666 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004773237.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: psn:Pedsa_2665 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004773238.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2895 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004773239.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: sli:Slin_0419 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004773240.1	PFAM: Prenyltransferase and squalene oxidase repeat; InterPro IPR001330; PFAM: Prenyltransferase/squalene oxidase
YP_004773241.1	KEGG: fjo:Fjoh_1613 hypothetical protein; SPTR:  uncharacterized protein
YP_004773242.1	KEGG: dfe:Dfer_3240 hypothetical protein; SPTR:  Tat (Twin-arginine translocation) pathway signal sequence containing protein
YP_004773243.1	SPTR:  uncharacterized protein
YP_004773244.1	PFAM: Bacterial transcription activator, effector binding domain; Uncharacterized conserved protein (DUF2174); COGs: COG4832 conserved hypothetical protein; InterPro IPR019233; KEGG: swd:Swoo_2851 hypothetical protein; PFAM: Protein of unknown function DUF2174, N-terminal; SPTR:  uncharacterized protein
YP_004773245.1	PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cao:Celal_4085 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase
YP_004773246.1	PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: gfo:GFO_1928 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Organic hydroperoxide resistance transcriptional regulator, MarR family protein
YP_004773247.1	PFAM: DoxX; KEGG: cao:Celal_3087 hypothetical protein; SPTR:  uncharacterized protein
YP_004773248.1	PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: cly:Celly_2854 electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR:  uncharacterized protein
YP_004773249.1	PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: cly:Celly_2853 MORN variant repeat-containing protein; PFAM: MORN variant; SPTR: MORN variant repeat-containing protein
YP_004773250.1	KEGG: cly:Celly_2852 hypothetical protein; SPTR:  uncharacterized protein
YP_004773251.1	KEGG: mtt:Ftrac_1241 hypothetical protein; SPTR:  uncharacterized protein
YP_004773252.1	KEGG: mtt:Ftrac_1242 hypothetical protein; SPTR:  uncharacterized protein
YP_004773253.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_1243 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004773254.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: mci:Mesci_5287 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
YP_004773255.1	KEGG: psl:Psta_0944 hypothetical protein; SPTR:  uncharacterized protein
YP_004773256.1	PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: zpr:ZPR_4290 divalent heavy-metal cations transporter; PFAM: Zinc/iron permease; SPTR: Predicted divalent heavy-metal cations transporter
YP_004773257.1	PFAM: Malate/L-lactate dehydrogenase; COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: psn:Pedsa_2198 malate dehydrogenase (NAD); PFAM: Malate/L-lactate dehydrogenase; SPTR: Malate dehydrogenase (NAD)
YP_004773258.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: sli:Slin_1177 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase
YP_004773259.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; KEGG: mtt:Ftrac_2758 transcriptional regulator, TraR/DksA family; SPTR:  RNA polymerase-binding protein DksA
YP_004773260.1	PFAM:  transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: mtt:Ftrac_2757 condensin subunit scpb; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; SPTR: Condensin subunit ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote
YP_004773261.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: dfe:Dfer_3919 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F
YP_004773262.1	PFAM: Domain of unknown function (DUF427); COGs: COG2343 conserved hypothetical protein; InterPro IPR007361; KEGG: cat:CA2559_13333 hypothetical protein; PFAM: Protein of unknown function DUF427; SPTR:  uncharacterized protein
YP_004773263.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: shg:Sph21_2569 dihydrolipoyl dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Mercuric reductase
YP_004773264.1	PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: cao:Celal_3929 globin family protein; SPTR: Globin family protein
YP_004773265.1	KEGG: gfo:GFO_1389 RmlC-like cupin family protein; SPTR: RmlC-like cupin family protein
YP_004773266.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314:IPR004154:IPR002315; KEGG: mtt:Ftrac_2543 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer
YP_004773267.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_5488 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773268.1	PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: sli:Slin_5485 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I
YP_004773269.1	PFAM: SusD family; InterPro IPR012944; KEGG: cly:Celly_2444 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain-containing protein
YP_004773270.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cly:Celly_2443 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004773271.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  TonB-dependent receptor
YP_004773272.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019; KEGG: mtt:Ftrac_2148 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; SPTR: DNA-3-methyladenine glycosylase I
YP_004773273.1	PFAM: Protein of unknown function (DUF3365); KEGG: mtt:Ftrac_2403 hypothetical protein; SPTR: Cytochrome c
YP_004773274.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR005139:IPR000352:IPR004373; KEGG: mtt:Ftrac_2406 bacterial peptide chain release factor 1 (brf-1); PFAM: Class I peptide chain release factor; Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1
YP_004773275.1	COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: hau:Haur_2022 hypothetical protein; SPTR:  glycosyl hydrolase, BNR protein
YP_004773276.1	PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR019868; KEGG: sli:Slin_5515 gliding motility-associated lipoprotein GldJ; PFAM: Sulphatase-modifying factor; SPTR: Gliding motility-associated lipoprotein GldJ; TIGRFAM: Gliding motility-associated lipoprotein GldJ-short
YP_004773277.1	PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 004576:IPR014001; KEGG: mtt:Ftrac_2144 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor
YP_004773278.1	PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; KEGG: mtt:Ftrac_2146 cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III
YP_004773279.1	PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010201; KEGG: mtt:Ftrac_0676 protease FtsH subunit HflK; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflK protein; TIGRFAM: HflK
YP_004773280.1	PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010200; KEGG: mtt:Ftrac_0675 protease FtsH subunit HflC; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflC protein; TIGRFAM: HflC
YP_004773281.1	KEGG: mtt:Ftrac_1836 hypothetical protein; SPTR:  uncharacterized protein
YP_004773282.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: mtt:Ftrac_1613 ferric uptake regulator, fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein Fur
YP_004773283.1	InterPro IPR001478; KEGG: mtt:Ftrac_1416 pdz/dhr/glgf domain protein; SMART: PDZ/DHR/GLGF; SPTR:  uncharacterized protein
YP_004773284.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655:IPR003594; KEGG: fjo:Fjoh_4936 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; SMART: ATP-binding region, ATPase-like; SPTR: Multi-sensor signal transduction histidine kinase
YP_004773285.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; HAMAP: Glucosamine-6-phosphate deaminase; InterPro IPR006148:IPR018322; KEGG: acl:ACL_0284 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine-6-phosphate deaminase; TIGRFAM: Glucosamine-6-phosphate isomerase, subgroup
YP_004773286.1	PFAM: UPF0126 domain; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: dfe:Dfer_5003 protein of unknown function UPF0126; PFAM: Uncharacterised protein family UPF0126; SPTR: YadS protein
YP_004773287.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: cpi:Cpin_4275 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR:  UbiE/COQ5 methyltransferase
YP_004773288.1	PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004773289.1	PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: sur:STAUR_6754 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: CrtW
YP_004773290.1	PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: mtt:Ftrac_1470 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1; TIGRFAM: LytB protein
YP_004773291.1	PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: sli:Slin_5959 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; SPTR: Phytoene synthase
YP_004773292.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937:IPR014105; KEGG: mtt:Ftrac_1472 phytoene desaturase; PFAM: Amine oxidase; SPTR: CrtI; TIGRFAM: Zeta-phytoene desaturase
YP_004773293.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_1473 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ORF1; TIGRFAM: RNA polymerase sigma-70
YP_004773294.1	PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: shg:Sph21_2875 peptidase M19 renal dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Membrane dipeptidase
YP_004773295.1	PFAM: Alanine racemase, N-terminal domain; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: sli:Slin_1233 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: Alanine racemase domain protein
YP_004773296.1	PFAM: Endoribonuclease L-PSP; COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: lby:Lbys_3494 endoribonuclease L-psp; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP
YP_004773297.1	PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: pdi:BDI_1331 H+/gluconate symporter and related permease; PFAM: Gluconate transporter; SPTR: Gluconate transporter, permease; TIGRFAM: Gluconate transporter
YP_004773298.1	PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mtt:Ftrac_2293 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR:  uncharacterized protein
YP_004773299.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4057 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfate sulfatase
YP_004773300.1	KEGG: cly:Celly_2894 hypothetical protein; SPTR:  uncharacterized protein
YP_004773301.1	SPTR:  uncharacterized protein
YP_004773302.1	KEGG: fbc:FB2170_00570 hypothetical protein; SPTR: Membrane protein
YP_004773303.1	PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR006935:IPR001650:IPR001943:IPR004807:IPR 014001; KEGG: mtt:Ftrac_2586 excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit
YP_004773304.1	KEGG: mtt:Ftrac_2974 hypothetical protein; SPTR:  uncharacterized protein
YP_004773305.1	PFAM: Divergent AAA domain; COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: rmr:Rmar_1271  transcriptional regulator; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase
YP_004773306.1	PFAM: RecX family; COGs: COG2137 conserved hypothetical protein; HAMAP: Regulatory protein recX; InterPro IPR003783; KEGG: mtt:Ftrac_2438 regulatory protein RecX; PFAM: Regulatory protein RecX; SPTR: Regulatory protein recX
YP_004773307.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: mtt:Ftrac_2600 triosephosphate isomerase; PFAM: Triosephosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase
YP_004773308.1	PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; COGs: COG2264 Ribosomal protein L11 methylase; HAMAP: Ribosomal protein L11 methyltransferase; InterPro IPR010456; KEGG: sli:Slin_5617 ribosomal L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; SPTR: Ribosomal protein L11 methyltransferase
YP_004773309.1	KEGG: sli:Slin_1885 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004773310.1	PFAM: Starch synthase catalytic domain; COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: mtt:Ftrac_2051 glycogen synthase (udp-glucose); PFAM: Starch synthase catalytic region; SPTR: Glycogen synthase
YP_004773311.1	PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721; KEGG: lby:Lbys_3190 pantothenate synthetase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase
YP_004773312.1	PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: chu:CHU_3834 aspartate alpha-decarboxylase; PFAM: Aspartate decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase
YP_004773313.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: mtt:Ftrac_2048 integral membrane protein; SPTR:  integral membrane protein
YP_004773314.1	PFAM:  neutral zinc metallopeptidase; COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: mtt:Ftrac_2046 peptidase membrane zinc metallopeptidase; PFAM: Peptidase, membrane zinc metallopeptidase, SPTR:  neutral zinc metallopeptidase
YP_004773315.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: cat:CA2559_06620 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-CoA dehydrogenase
YP_004773316.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005:IPR018060; KEGG: chu:CHU_3826 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004773317.1	PFAM: PcrB family; TIGRFAM: phosphoglycerol geranylgeranyltransferase; geranylgeranylglyceryl phosphate synthase; COGs: COG1646 phosphate-binding protein with TIM-barrel fold; HAMAP: Geranylgeranylglyceryl phosphate synthase; InterPro IPR008205:IPR010946; KEGG: mtt:Ftrac_2043 geranylgeranylglyceryl phosphate synthase; PFAM: Geranylgeranylglyceryl phosphate synthase-like; SPTR: Geranylgeranylglyceryl phosphate synthase; TIGRFAM: Geranylgeranylglyceryl phosphate synthase; Geranylgeranylglyceryl phosphate synthase-like
YP_004773318.1	SPTR:  uncharacterized protein
YP_004773319.1	PFAM: Protein of unknown function (DUF1469); KEGG: mtt:Ftrac_2041 hypothetical protein; SPTR:  uncharacterized protein
YP_004773320.1	PFAM: DSBA-like thioredoxin domain; COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: sli:Slin_1488 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: Dithiol-disulfide isomerase
YP_004773321.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937:IPR014105; KEGG: mtt:Ftrac_1976 phytoene desaturase; PFAM: Amine oxidase; SPTR:  phytoene dehydrogenase; TIGRFAM: Zeta-phytoene desaturase
YP_004773322.1	PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638:IPR008258; KEGG: mtt:Ftrac_1791 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein, family 3
YP_004773323.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_1899 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR:  outer membrane efflux protein; manually curated
YP_004773324.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_1898 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein
YP_004773325.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_1897 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: Cation or acridine efflux membrane fusion protein; TIGRFAM: Secretion protein HlyD
YP_004773326.1	KEGG: shg:Sph21_3438 OmpA-related protein; SPTR: OmpA-related protein
YP_004773327.1	PFAM: YhhN-like protein; COGs: COG3714 membrane protein; InterPro IPR012506; KEGG: fbc:FB2170_10414 hypothetical protein; PFAM: YhhN-like; SPTR: Membrane protein
YP_004773328.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004365:IPR004364:IPR004115:IPR004524; KEGG: mtt:Ftrac_2962 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type
YP_004773329.1	PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_1904 peptidase M23; PFAM: Peptidase M23; SPTR: M23 peptidase domain protein
YP_004773330.1	COGs: COG0438 Glycosyltransferase; KEGG: group 1 glycosyl transferase; SPTR:  uncharacterized protein
YP_004773331.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835:IPR013446; KEGG: cag:Cagg_2148 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate cytidylyltransferase; TIGRFAM: Glucose-1-phosphate cytidylyltransferase
YP_004773332.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: oca:OCAR_4620 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004773333.1	PFAM: SAF domain; Shikimate / quinate 5-dehydrogenase; COGs: COG4091 homoserine dehydrogenase; InterPro IPR013974; KEGG: ana:alr2831 hypothetical protein; PFAM: SAF domain; SPTR: Alr2831 protein
YP_004773334.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: cyn:Cyan7425_5190 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_004773335.1	PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR001509; KEGG: fma:FMG_1137 capsular polysaccharide biosynthesis protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR:  uncharacterized protein
YP_004773336.1	PFAM: Mov34/MPN/PAD-1 family; InterPro IPR000555; KEGG: hya:HY04AAS1_1236 Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family protein
YP_004773337.1	PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR003749:IPR000594:IPR007901:IPR001763; KEGG: svo:SVI_1923 molybdenum cofactor biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; ThiamineS; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; SPTR: Molybdopterin biosynthesis protein
YP_004773338.1	PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: psn:Pedsa_0181 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR:  OmpA family protein
YP_004773339.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_5273 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004773340.1	PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: fjo:Fjoh_1645 hypothetical protein; PFAM: Protein of unknown function DUF11; SPTR:  uncharacterized protein; TIGRFAM: Protein of unknown function DUF11
YP_004773341.1	KEGG: cts:Ctha_0375 hypothetical protein; SPTR:  uncharacterized protein
YP_004773343.1	PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: wvi:Weevi_0183 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; SPTR: Superoxide dismutase
YP_004773344.1	KEGG: wvi:Weevi_0184 hypothetical protein; SPTR:  uncharacterized protein
YP_004773345.1	KEGG: zpr:ZPR_0959 hydrolase-like protein; SPTR:  uncharacterized protein
YP_004773346.1	KEGG: mtt:Ftrac_0101 hypothetical protein; SPTR:  uncharacterized protein
YP_004773347.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: coc:Coch_1800 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004773348.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2317); TIGRFAM: bacillithiol biosynthesis cysteine-adding enzyme BshC; COGs: COG4365 conserved hypothetical protein; HAMAP: UPF0747 protein; InterPro IPR011199; KEGG: lby:Lbys_2704 hypothetical protein; PFAM: Uncharacterised conserved protein UCP012535; SPTR: UPF0747 protein ALPR1_04120
YP_004773349.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: shg:Sph21_0281 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004773350.1	KEGG: sli:Slin_6874 hypothetical protein; SPTR:  uncharacterized protein
YP_004773351.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_2816 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase, M16 (Pitrilysin) family
YP_004773352.1	PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; InterPro IPR003526; KEGG: mtt:Ftrac_2817 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
YP_004773353.1	PFAM: Protein of unknown function (DUF752); COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: mtt:Ftrac_2818 hypothetical protein; PFAM: Protein of unknown function DUF752; SPTR:  methyltransferase
YP_004773355.1	PFAM: FG-GAP repeat; KEGG: msv:Mesil_0837 FG-GAP repeat protein; SPTR: FG-GAP repeat protein
YP_004773356.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773357.1	PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: mtt:Ftrac_3281 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: Kinase, PfkB family
YP_004773358.1	KEGG: sli:Slin_3024 hypothetical protein; SPTR: Transmembrane protein
YP_004773359.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: cyt:cce_4457 hypothetical protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase
YP_004773360.1	KEGG: cpi:Cpin_7261 hypothetical protein; SPTR:  uncharacterized protein
YP_004773361.1	PFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: sli:Slin_0084 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; SPTR: 3-dehydroquinate synthase domain protein
YP_004773362.1	PFAM: UbiA prenyltransferase; InterPro IPR000537; KEGG: cyc:PCC7424_2286 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Prenyltransferase, UbiA family
YP_004773363.1	PFAM: TatD related DNase; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130; KEGG: cyt:cce_4838  TatD DNase-like metal-dependent hydrolase; PFAM: Deoxyribonuclease, TatD-related; SPTR: Hydrolase, TatD family
YP_004773364.1	KEGG: cyt:cce_4452 hypothetical protein; SPTR:  uncharacterized protein
YP_004773365.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: dfe:Dfer_3167 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold domain protein
YP_004773366.1	PFAM: Xylose isomerase-like TIM barrel; KEGG: sli:Slin_0969 xylose isomerase; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773367.1	KEGG: dfe:Dfer_3169 hypothetical protein; SPTR:  uncharacterized protein
YP_004773368.1	KEGG: sli:Slin_0967 hypothetical protein; SPTR:  uncharacterized protein
YP_004773369.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: sli:Slin_0966 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase
YP_004773370.1	PFAM: Cytochrome c; TIGRFAM:  heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR003088:IPR013427; KEGG: sli:Slin_0965 heme-binding protein; PFAM: Cytochrome c, class I; SPTR: Heme-binding domain-containing protein; TIGRFAM:  haem-binding region
YP_004773371.1	PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0963 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004773372.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_0962 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004773373.1	PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0956 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004773374.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_0955 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004773375.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: aas:Aasi_0930 50S ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19
YP_004773376.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR016009:IPR002649; KEGG: mtt:Ftrac_1727 tRNA (guanine37-n(1)-) methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria
YP_004773377.1	PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR002676:IPR007903:IPR011961; KEGG: dfe:Dfer_2581 16S rRNA processing protein RimM; PFAM: PRC-barrel; RimM protein; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM
YP_004773378.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: mtt:Ftrac_1729 SSU ribosomal protein s16p; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16
YP_004773379.1	KEGG: gfo:GFO_2551 hypothetical protein; SPTR:  uncharacterized protein
YP_004773380.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: zpr:ZPR_3532 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: Choline/carnitine/betaine transport; TIGRFAM: BCCT transporter
YP_004773381.1	PFAM: Universal stress protein family; InterPro IPR006016; KEGG: gfo:GFO_2553 universal stress protein family protein; PFAM: UspA; SPTR: Universal stress protein family
YP_004773385.1	PFAM: Phosphotriesterase; COGs: COG1735 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001559; KEGG: rbi:RB2501_12292 phosphotriesterase; PFAM: Aryldialkylphosphatase; SPTR: Phosphotriesterase
YP_004773386.1	KEGG: rbi:RB2501_10722 hypothetical protein; SPTR:  uncharacterized protein
YP_004773387.1	PFAM: BlaR1 peptidase M56; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: sli:Slin_5187 peptidase M56 BlaR1; PFAM: Peptidase M56, BlaR1; SPTR:  peptidase M56, BlaR1
YP_004773388.1	PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: sli:Slin_5186 CopY family transcriptional regulator; PFAM: Penicillinase repressor; SPTR:  transcriptional regulator
YP_004773389.1	PFAM: Protein of unknown function (DUF833); COGs: COG3332 conserved hypothetical protein; InterPro IPR008551; KEGG: swo:Swol_2245 hypothetical protein; PFAM: Protein of unknown function DUF833; SPTR:  uncharacterized protein
YP_004773390.1	PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase
YP_004773391.1	PFAM:  transposase; InterPro IPR007069; KEGG: tjr:TherJR_1461  transposase; PFAM: Transposase, IS801/IS1294; SPTR:  transposase
YP_004773392.1	SPTR:  uncharacterized protein
YP_004773393.1	KEGG: pct:PC1_2136 hypothetical protein; SPTR:  uncharacterized protein
YP_004773394.1	PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mtt:Ftrac_3585 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region
YP_004773395.1	PFAM: Protein of unknown function DUF86; InterPro IPR008201; KEGG: mtt:Ftrac_3586 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR:  uncharacterized protein
YP_004773396.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cpi:Cpin_4591 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase
YP_004773398.1	PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: vfi:VF_0871 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR:  uncharacterized protein
YP_004773399.1	PFAM: FR47-like protein; InterPro IPR000182; KEGG: swp:swp_2557 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family
YP_004773400.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fbc:FB2170_13081 cAMP-binding protein; PFAM: Cyclic nucleotide-binding; SPTR: cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase
YP_004773401.1	PFAM: DoxX; KEGG: gob:Gobs_2005 DoxX family protein; SPTR: DoxX family protein
YP_004773402.1	PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: chu:CHU_3130 hypothetical protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR:  uncharacterized protein
YP_004773403.1	PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: chu:CHU_0677 hypothetical protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR:  uncharacterized protein
YP_004773404.1	PFAM: Redoxin; InterPro IPR013740; KEGG: sli:Slin_2789 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004773405.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cly:Celly_1919 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR:  uncharacterized protein
YP_004773406.1	PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cly:Celly_1918 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; manually curated
YP_004773407.1	PFAM: Glycosyl Hydrolase 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: sea:SeAg_B1211 glycosyl hydrolase, family 88; PFAM: Glycosyl hydrolase, family 88; SPTR:  uncharacterized protein
YP_004773409.1	KEGG: mar:MAE_11990 hypothetical protein; SPTR:  uncharacterized protein
YP_004773410.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM:  bacillithiol system thiol disulfide oxidoreductase, YpdA family; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: lby:Lbys_2762 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase
YP_004773411.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: cat:CA2559_10963 polyphosphate kinase; PFAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_004773412.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; COGs: COG2114 Adenylate cyclase 3 (some protein contain HAMP domain); KEGG: gfo:GFO_0037 adenylate/guanylate cyclase catalytic subunit; SPTR: Membrane protein containing adenylate/guanylate cyclase catalytic domain
YP_004773413.1	PFAM: Calcineurin-like phosphoesterase; Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR004843:IPR000184; KEGG: cpi:Cpin_1411 metallophosphoesterase; PFAM: Metallophosphoesterase; Bacterial surface antigen (D15); SPTR: Metallophosphoesterase
YP_004773414.1	KEGG: cpi:Cpin_1412 hypothetical protein; SPTR:  uncharacterized protein
YP_004773415.1	PFAM: HD domain; InterPro IPR006674; KEGG: sli:Slin_2813 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Metal dependent phosphohydrolase
YP_004773417.1	PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_0318 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel
YP_004773418.1	PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: mtt:Ftrac_2759 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Membrane protein
YP_004773419.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM:  TIM-barrel protein, nifR3 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269:IPR004652; KEGG: mtt:Ftrac_2760 tRNA-U20-dihydrouridine synthase; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3
YP_004773421.1	PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: mtt:Ftrac_2761 abortive infection protein; PFAM: Abortive infection protein; SPTR: Metal-dependent membrane protease
YP_004773422.1	PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: mtt:Ftrac_2761 abortive infection protein; PFAM: Abortive infection protein; SPTR: Metal-dependent membrane protease
YP_004773423.1	KEGG: dfe:Dfer_2994 hypothetical protein; SPTR:  uncharacterized protein
YP_004773424.1	PFAM: Cytidylyltransferase; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: mtt:Ftrac_2763 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase
YP_004773425.1	PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; InterPro IPR003817:IPR004428; KEGG: mtt:Ftrac_2765 phosphatidylserine decarboxylase related protein; PFAM: Phosphatidylserine decarboxylase-related; SPTR: Phosphatidylserine decarboxylase proenzyme; TIGRFAM: Phosphatidylserine decarboxylase-related protein
YP_004773426.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: mtt:Ftrac_1349 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator, LuxR family
YP_004773427.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cpi:Cpin_6820 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR:  sensor histidine kinase
YP_004773428.1	KEGG: cpi:Cpin_6819 hypothetical protein; SPTR:  uncharacterized protein
YP_004773429.1	SPTR: Chaperone DnaK
YP_004773430.1	PFAM: Ion transport protein; InterPro IPR005821; KEGG: ddf:DEFDS_1441 potassium channel protein; PFAM: Ion transport; SPTR: Cation transporter, VIC family
YP_004773431.1	KEGG: cly:Celly_0071 hypothetical protein; SPTR:  uncharacterized protein
YP_004773432.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase
YP_004773433.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase
YP_004773434.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834:IPR006357; KEGG: rba:RB9200 N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA
YP_004773435.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: ran:Riean_1995 ribosomal large subunit pseudouridine synthase F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F
YP_004773436.1	PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127:IPR011095:IPR005905; KEGG: phe:Phep_1847 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase
YP_004773437.1	InterPro IPR001434; KEGG: wsu:WS1797 hypothetical protein; SPTR: Lipoprotein; TIGRFAM: Protein of unknown function DUF11
YP_004773438.1	PFAM: Peptide-N-glycosidase F, N terminal; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773439.1	InterPro IPR001258; KEGG: sli:Slin_5930 NHL repeat containing protein; PFAM: NHL repeat; SPTR: NHL repeat containing protein
YP_004773440.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR010869:IPR006311; KEGG: sli:Slin_0958 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR:  Tat (Twin-arginine translocation) pathway signal sequence containing protein
YP_004773441.1	PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: sli:Slin_0957 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR:  uncharacterized protein
YP_004773442.1	PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); Carbohydrate binding module (family 6); InterPro IPR011429:IPR011444:IPR005084; KEGG: dfe:Dfer_3702 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; Carbohydrate binding domain, family 6; SPTR:  uncharacterized protein
YP_004773443.1	PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; InterPro IPR010869:IPR006311; KEGG: sli:Slin_5451 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR:  uncharacterized protein
YP_004773444.1	PFAM: Amidohydrolase; InterPro IPR006992; KEGG: fbc:FB2170_01577 hypothetical protein; PFAM: Amidohydrolase 2; SPTR:  uncharacterized protein
YP_004773446.1	KEGG: pdi:BDI_2326 hypothetical protein; SPTR: Metal dependent phosphohydrolase
YP_004773447.1	PFAM: Major Facilitator Superfamily; TIGRFAM: cyanate transporter; COGs: COG2807 Cyanate permease; InterPro IPR011701; KEGG: bld:BLi04347 YycB; PFAM: Major facilitator superfamily MFS-1; SPTR: Inner membrane transport protein YeaN
YP_004773448.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2179); COGs: COG4843 conserved hypothetical protein; HAMAP: UPF0316 protein; InterPro IPR019264; KEGG: mtt:Ftrac_2187 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: UPF0316 protein ALPR1_20318
YP_004773449.1	PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); HAMAP: Monofunctional biosynthetic peptidoglycan transglycosylase; InterPro IPR001264:IPR011812; KEGG: zpr:ZPR_4618 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51; SPTR: Monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase
YP_004773450.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; COGs: COG2262 GTPase; InterPro IPR002917:IPR016496:IPR005225; KEGG: mtt:Ftrac_2681 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein
YP_004773451.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: dfe:Dfer_2965 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_004773452.1	COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR004013; KEGG: chu:CHU_0001 capsular polysaccharide biosynthesis protein; PFAM: PHP, C-terminal; SPTR:  capsular polysaccharide biosynthesis protein
YP_004773453.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: chu:CHU_0002 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR:  dihydroflavonol 4-reductase
YP_004773454.1	PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR001440:IPR019734; KEGG: mtt:Ftrac_2675 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat containing protein
YP_004773455.1	PFAM: (2R)-phospho-3-sulfolactate synthase (ComA); COGs: COG1809 conserved hypothetical protein; InterPro IPR003830; KEGG: sli:Slin_0707 phosphosulfolactate synthase; PFAM: (2R)-phospho-3-sulpholactate synthase, ComA; SPTR: Phosphosulfolactate synthase
YP_004773456.1	PFAM: Domain of unknown function (DUF368); COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: mtt:Ftrac_2673 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Integral membrane protein
YP_004773457.1	PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase; COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708:IPR006151; KEGG: cpi:Cpin_1671 shikimate dehydrogenase substrate-binding protein; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Shikimate dehydrogenase
YP_004773458.1	KEGG: cao:Celal_0787 hypothetical protein; SPTR:  uncharacterized protein
YP_004773459.1	PFAM: Squalene epoxidase; FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076; KEGG: mtt:Ftrac_2463 monooxygenase fad-binding protein; PFAM: FAD dependent oxidoreductase; SPTR:  FAD dependent oxidoreductase
YP_004773460.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_5636 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  TonB-dependent receptor
YP_004773461.1	PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: chu:CHU_3762 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase
YP_004773462.1	TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: mtt:Ftrac_1993 protein involved in gliding motility gldd; SPTR: Gliding motility-associated lipoprotein GldD; TIGRFAM: Gliding motility-associated lipoprotein, GldD
YP_004773463.1	PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mtt:Ftrac_2389 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase
YP_004773464.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_1981 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Probable TonB-dependent receptor
YP_004773465.1	KEGG: shg:Sph21_3035 twin-arginine translocation pathway signal; SPTR:  uncharacterized protein
YP_004773466.1	PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: cpi:Cpin_5079 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase
YP_004773468.1	PFAM: Signal peptidase (SPase) II; COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: mtt:Ftrac_2466 signal peptidase II; SPTR: Lipoprotein signal peptidase
YP_004773469.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR002301; KEGG: mtt:Ftrac_2465 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia
YP_004773471.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR006261:IPR003607; KEGG: mtt:Ftrac_2393 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: dGTPase; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase
YP_004773472.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: sli:Slin_6590 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT
YP_004773473.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR005330:IPR004764; KEGG: cpi:Cpin_3339 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: Acriflavin resistance protein; MHYT; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1
YP_004773474.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_4642 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004773475.1	PFAM: Domain of unknown function (DUF1083); KEGG: rmr:Rmar_2792 hypothetical protein; SPTR:  uncharacterized protein
YP_004773476.1	KEGG: cat:CA2559_03570 probable lipoprotein; SPTR:  uncharacterized protein
YP_004773477.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR002734:IPR004794; KEGG: chu:CHU_0203 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD
YP_004773478.1	COGs: COG1956 GAF domain-containing protein; KEGG: mtt:Ftrac_1491 gafa; gaf domain-containing protein; SPTR: GAF domain protein
YP_004773479.1	InterPro IPR000835; KEGG: rba:RB9350 hypothetical protein; PFAM: HTH transcriptional regulator, MarR; SPTR:  uncharacterized protein
YP_004773480.1	PFAM: Fic/DOC family; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: cao:Celal_0831 filamentation induced by camp protein fic; PFAM: Filamentation induced by cAMP/death on curing, related; SPTR: Filamentation induced by cAMP protein Fic
YP_004773481.1	KEGG: rba:RB11249 acyl-CoA thioesterase I; SPTR: O-antigen related protein
YP_004773482.1	PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003018:IPR003661:IPR003594; KEGG: GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; SPTR: Signal sensor histidine kinase (GAF domain)
YP_004773483.1	KEGG: fjo:Fjoh_3289 hypothetical protein; SPTR:  uncharacterized protein
YP_004773484.1	KEGG: hdn:Hden_3441 extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor
YP_004773485.1	KEGG: cly:Celly_1706 hypothetical protein; SPTR:  uncharacterized protein
YP_004773487.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cly:Celly_1473  Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR:  transcriptional regulator, Crp/Fnr family
YP_004773488.1	PFAM: Protein of unknown function (DUF1569); KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773489.1	KEGG: chu:CHU_2272 hypothetical protein; SPTR:  uncharacterized protein
YP_004773491.1	TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: bbk:BARBAKC583_0933 hexapeptide repeat-containing transferase; SPTR: Bacterial transferase hexapeptide repeat protein
YP_004773492.1	PFAM: ATP-grasp domain; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR003806; KEGG: reu:Reut_A2484 carbamoyl phosphate synthase-like protein; PFAM: ATP-grasp fold, DUF201-type; SPTR: Carbamoylphosphate synthase
YP_004773493.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: winged helix family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family
YP_004773494.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: lby:Lbys_2086 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase
YP_004773495.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: fjo:Fjoh_4293 outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004773496.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fjo:Fjoh_4294 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004773497.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR001036:IPR004763; KEGG: lby:Lbys_2083 heavy metal efflux pump, czca family; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA
YP_004773498.1	PFAM: Acetyltransferase (GNAT) family; COGs: COG3153 acetyltransferase; InterPro IPR000182; KEGG: psn:Pedsa_0393 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family
YP_004773499.1	PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: swp:swp_2408 dihydrofolate reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR:  uncharacterized protein
YP_004773500.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: axy:AXYL_06108 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Decarboxylase; TIGRFAM: Conserved hypothetical protein CHP00730
YP_004773501.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase rdgB; InterPro IPR002637; KEGG: osp:Odosp_2520 nucleoside-triphosphatase RdgB; PFAM: Ham1-like protein; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein
YP_004773502.1	PFAM: Phosphoribulokinase / Uridine kinase; TIGRFAM: uridine kinase; COGs: COG0572 Uridine kinase; InterPro IPR006083; KEGG: mtt:Ftrac_2535 phosphoribulokinase/uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; SPTR: Uridine kinase
YP_004773503.1	SPTR:  uncharacterized protein
YP_004773504.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335:IPR005791:IPR005665; KEGG: mtt:Ftrac_1996 protein translocase subunit SecF;protein translocase subunit SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Protein-export membrane protein SecD/protein-export membrane protein SecF; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; SecF protein
YP_004773505.1	KEGG: cpi:Cpin_6819 hypothetical protein; SPTR:  uncharacterized protein
YP_004773506.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; InterPro IPR002133; KEGG: fjo:Fjoh_1489 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase
YP_004773507.1	PFAM: Protein of unknown function (DUF1572); InterPro IPR011466; KEGG: fps:FP1585 hypothetical protein; PFAM: Protein of unknown function DUF1572; SPTR:  uncharacterized protein
YP_004773508.1	KEGG: shg:Sph21_3319 hypothetical protein; SPTR: Protein EcsC
YP_004773509.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: sli:Slin_1698 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR:  oxidoreductase, NAD-binding Rossmann fold protein
YP_004773510.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773511.1	KEGG: gfo:GFO_3122 membrane or secreted protein; SPTR:  uncharacterized protein
YP_004773512.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773513.1	PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: integral membrane sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Signal transduction histidine kinase-like protein
YP_004773514.1	PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: psn:Pedsa_3661 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR:  transcriptional regulator
YP_004773515.1	PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR008756:IPR006260; KEGG: bsa:Bacsa_3301 TonB family protein; PFAM: Peptidase M56, BlaR1; SPTR: TonB protein; TIGRFAM: TonB, C-terminal
YP_004773516.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); KEGG: cao:Celal_0578 alpha/beta hydrolase fold protein; SPTR:  uncharacterized protein
YP_004773517.1	PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bba:Bd2163 sugar transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar efflux transporter
YP_004773518.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR014001; KEGG: mtt:Ftrac_2268 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein
YP_004773519.1	PFAM: ABC transporter; COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: zpr:ZPR_2985 molybdenum transport atp-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Molybdenum transport atp-binding protein
YP_004773520.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease; COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515:IPR011867; KEGG: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Molybdate ABC transporter, permease; TIGRFAM: Molybdate ABC transporter, permease
YP_004773521.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950; KEGG: glo:Glov_0450 molybdenum ABC transporter, periplasmic molybdate-binding protein; SPTR: Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein
YP_004773522.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase
YP_004773523.1	PFAM: MepB protein; COGs: COG4815 conserved hypothetical protein; InterPro IPR011235; KEGG: mtt:Ftrac_3073 hypothetical protein; PFAM: Uncharacterised conserved protein UCP032285; SPTR:  uncharacterized protein
YP_004773524.1	KEGG: cao:Celal_1430 hypothetical protein; SPTR:  uncharacterized protein
YP_004773525.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: fbc:FB2170_14028 RB13-6 antigen; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: RB13-6 antigen
YP_004773526.1	KEGG: mbu:Mbur_1061 hypothetical protein; SPTR:  uncharacterized protein
YP_004773527.1	PFAM: Domain of Unknown Function (DUF1206); InterPro IPR009597; KEGG: cat:CA2559_10228 hypothetical protein; PFAM: Protein of unknown function DUF1206; SPTR:  uncharacterized protein
YP_004773528.1	PFAM: DSBA-like thioredoxin domain; COGs: COG2761 dithiol-disulfide isomerase involved in polyketide biosynthesis; InterPro IPR001853; KEGG: gfo:GFO_0822 DsbA thioredoxin oxdioreductase-polyketide synthase; PFAM: DSBA oxidoreductase; SPTR: DSBA thioredoxin oxdioreductase-possible polyketide synthase
YP_004773529.1	TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; KEGG: cat:CA2559_12088 hypothetical protein; SPTR:  uncharacterized protein
YP_004773530.1	PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein
YP_004773531.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: rba:RB2403 D-mannonate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; SPTR: Mannitol dehydrogenase domain protein
YP_004773532.1	COGs: COG1457 Purine-cytosine permease and related protein; KEGG: transmembrane prediction; SPTR:  uncharacterized protein
YP_004773533.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773534.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sna:Snas_5301 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004773537.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_09296 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004773538.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: fbc:FB2170_09286 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase
YP_004773539.1	PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: zpr:ZPR_0713 NmrA family protein; SPTR: NmrA family protein
YP_004773540.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cts:Ctha_2427 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein
YP_004773541.1	PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR001387:IPR013430; KEGG: gfo:GFO_1993 plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; SPTR: Plasmid maintenance system antidote protein; TIGRFAM: Addiction module antidote protein, HigA
YP_004773542.1	PFAM: Plasmid maintenance system killer protein; COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: chu:CHU_0643 hypothetical protein; PFAM: Plasmid maintenance system killer; SPTR:  uncharacterized protein
YP_004773543.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773544.1	KEGG: fbc:FB2170_11041 hypothetical protein; SPTR:  uncharacterized protein
YP_004773545.1	PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_03435 polyketide synthesis domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Polyketide synthesis domain protein
YP_004773546.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR001509; KEGG: geb:GM18_2351 short-chain dehydrogenase/reductase SDR; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004773548.1	PFAM: IS66 Orf2 like protein; InterPro IPR008878; KEGG: zpr:ZPR_3984 transposase orf1, IS66 family protein; PFAM: Transposase (), IS66 Orf2 like; SPTR: Transposase orf1, IS66 family protein
YP_004773549.1	PFAM: Transposase IS66 family; COGs: COG3436 Transposase and inactivated derivatives; InterPro IPR004291; KEGG: shg:Sph21_5072 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase
YP_004773550.1	KEGG: rbi:RB2501_03440 AraC family transcriptional regulator; SPTR: Transcriptional regulator, AraC family protein
YP_004773552.1	KEGG: fjo:Fjoh_1092 hypothetical protein; SPTR:  uncharacterized protein
YP_004773553.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); SPTR: Reverse transcriptase
YP_004773555.1	PFAM: Protein of unknown function (DUF1016); COGs: COG4804 conserved hypothetical protein; InterPro IPR009362; KEGG: fsu:Fisuc_1719 protein of unknown function DUF1016; PFAM: Protein of unknown function DUF1016; SPTR: Uncharacterized protein yhcG
YP_004773556.1	KEGG: bsn:BSn5_09010 hypothetical protein; SPTR:  uncharacterized protein
YP_004773558.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR:  uncharacterized protein
YP_004773559.1	KEGG: ypz:YPZ3_0996 hypothetical protein; SPTR:  uncharacterized protein
YP_004773561.1	KEGG: fba:FIC_00637 hypothetical protein; SPTR:  uncharacterized protein
YP_004773562.1	PFAM:  transposase; InterPro IPR007069; KEGG: bph:Bphy_7618  transposase; PFAM: Transposase, IS801/IS1294; SPTR:  transposase; manually curated
YP_004773563.1	KEGG: dfe:Dfer_5762 hypothetical protein; SPTR:  uncharacterized protein
YP_004773564.1	PFAM: Protein of unknown function (DUF2847); TIGRFAM: bacillithiol system protein YtxJ; KEGG: mtt:Ftrac_2813 hypothetical protein; SPTR: General stress protein
YP_004773565.1	KEGG: glo:Glov_2797 hypothetical protein; SPTR:  uncharacterized protein
YP_004773566.1	PFAM: Exonuclease; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR013520:IPR006055; KEGG: cli:Clim_1265 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III PolC-type (PolIII)
YP_004773567.1	PFAM:  nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; nucleotidyltransferase DUF294; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: cli:Clim_1266  CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase ; Cyclic nucleotide-binding; Cystathionine beta-synthase, core; Domain of unknown function DUF294,  nucleotidyltransferase substrate-binding; SMART: Cyclic nucleotide-binding; Cystathionine beta-synthase, core; SPTR: CBS domain protein
YP_004773568.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873:IPR011904; KEGG: mtt:Ftrac_1923 acetyl-coenzyme a synthetase; PFAM: AMP-dependent synthetase/ligase; SPTR: Acetate--CoA ligase; TIGRFAM: Acetate--CoA ligase
YP_004773569.1	PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; transporter, SSS family; COGs: COG4147 symporter; InterPro IPR001734:IPR019899:IPR019900; KEGG: cts:Ctha_1886 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Transporter, solute:sodium symporter (SSS) family; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; Sodium/solute symporter, subgroup
YP_004773570.1	TIGRFAM:  solute:sodium symporter small subunit; COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: cpc:Cpar_1645 hypothetical protein; SPTR: Lipoprotein; TIGRFAM: Probable solute:sodium symporter, small subunit
YP_004773571.1	TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: cpi:Cpin_0719 NAD metabolism ATPase/kinase-like protein; SPTR: ATPase/kinase involved in NAD metabolism-like protein
YP_004773572.1	PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: gfo:GFO_3059 nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Nicotinamide mononucleotide transporter PnuC; TIGRFAM: Nicotinamide mononucleotide transporter PnuC
YP_004773573.1	PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR002938; KEGG: cpi:Cpin_0819 glucose-methanol-choline oxidoreductase; PFAM: Monooxygenase, FAD-binding; SPTR: GMC oxidoreductase
YP_004773574.1	PFAM: Dehydratase; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR000581; KEGG: dfe:Dfer_4563 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; SPTR: Dihydroxy-acid dehydratase
YP_004773575.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_1831 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase
YP_004773576.1	InterPro IPR011462; KEGG: zpr:ZPR_4196 hypothetical protein; SPTR:  uncharacterized protein
YP_004773577.1	PFAM: Glycosyl hydrolases family 43; InterPro IPR013148; KEGG: rba:RB13146 xylosidase/arabinosidase; PFAM: Glycosyl hydrolases family 32, N-terminal; SPTR: Glycoside hydrolase, family 43
YP_004773578.1	KEGG: cao:Celal_1430 hypothetical protein; SPTR:  uncharacterized protein
YP_004773579.1	KEGG: plm:Plim_1880 PEBP family protein; SPTR:  uncharacterized protein
YP_004773580.1	KEGG: bsn:BSn5_09010 hypothetical protein; SPTR:  uncharacterized protein
YP_004773582.1	PFAM: Beta-lactamase; Domain of unknown function (DUF3471); COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase
YP_004773583.1	KEGG: cpi:Cpin_3480 hypothetical protein; SPTR:  uncharacterized protein
YP_004773584.1	PFAM: Phage derived protein Gp49-like (DUF891); TIGRFAM:  addiction module killer protein; COGs: COG3657 conserved hypothetical protein; InterPro IPR009241:IPR014056; KEGG: cao:Celal_1444 addiction module killer protein; PFAM: Protein of unknown function DUF891; SPTR: Addiction module killer protein; TIGRFAM: Addiction module killer protein, HI1419
YP_004773585.1	TIGRFAM: probable addiction module antidote protein; COGs: COG3636 transcriptional regulator protein; InterPro IPR014057; KEGG: cao:Celal_1445 addiction module antidote protein; SPTR: Addiction module antidote protein; TIGRFAM: Addiction module antidote protein, HI1420
YP_004773589.1	KEGG: mbr:MONBRDRAFT_33744 hypothetical protein; SPTR:  uncharacterized protein
YP_004773590.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02110  secreted sulfatase YdeN; PFAM: Sulfatase; SPTR:  secreted sulfatase ydeN
YP_004773591.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: vap:Vapar_5784 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family protein
YP_004773592.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; KEGG: sli:Slin_1417 esterase/lipase; SPTR: Esterase/lipase
YP_004773593.1	PFAM: Class II Aldolase and Adducin N-terminal domain; short chain dehydrogenase; TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; COGs: COG3347 conserved hypothetical protein; InterPro IPR001303:IPR002198:IPR013454; KEGG: dfe:Dfer_4610 short chain dehydrogenase; PFAM: Class II aldolase/adducin, N-terminal; Short-chain dehydrogenase/reductase SDR; SPTR: Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
YP_004773594.1	TIGRFAM: L-rhamnose catabolism isomerase, Pseudomonas stutzeri subtype; COGs: COG4952 sugar isomerase; InterPro IPR012307; KEGG: sli:Slin_1804 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773595.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: zpr:ZPR_1551 carbohydrate kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; SPTR: Carbohydrate kinase
YP_004773596.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; KEGG: fbc:FB2170_14733  xylanase; SPTR:  uncharacterized protein
YP_004773597.1	KEGG: ipa:Isop_0067 hypothetical protein; SPTR:  uncharacterized protein
YP_004773598.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: zpr:ZPR_0899 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR:  uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047
YP_004773599.1	PFAM: Domain of unknown function (DUF336); COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: nit:NAL212_0634 hypothetical protein; PFAM: Protein of unknown function DUF336; SPTR:  uncharacterized protein
YP_004773600.1	PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: sli:Slin_4804 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase class I and II
YP_004773601.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773602.1	COGs: COG3021 conserved hypothetical protein; KEGG: gfo:GFO_1978 hypothetical protein; SPTR:  uncharacterized protein
YP_004773603.1	PFAM: PIF1 helicase; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593; KEGG: 5'-3' DNA helicase; SMART: ATPase, AAA+ type, core; SPTR: 5'-3' DNA helicase
YP_004773604.1	PFAM: PA14 domain; KEGG: mtt:Ftrac_3617 hypothetical protein; SPTR: Conserved repeat domain protein
YP_004773605.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439:IPR004602; KEGG: mtt:Ftrac_1878 excinuclease ABC, A subunit; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit
YP_004773606.1	PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: mtt:Ftrac_0596 membrane bound O-acyl transferase MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Alginate O-acetylation protein
YP_004773608.1	PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: phe:Phep_1133 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Serine/threonine-protein kinase Pkn1
YP_004773609.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: psn:Pedsa_1444 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004773610.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307:IPR006311; KEGG: shg:Sph21_3452 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004773611.1	KEGG: mtt:Ftrac_2357 hypothetical protein; SPTR:  uncharacterized protein
YP_004773612.1	SPTR:  uncharacterized protein
YP_004773613.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dfe:Dfer_4566 Fur family transcriptional regulator protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, FUR family
YP_004773614.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cly:Celly_1274 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter
YP_004773615.1	PFAM: Phosphotransferase enzyme family; InterPro IPR002575; KEGG: coc:Coch_1518 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR:  mucin-desulfating sulfatase
YP_004773616.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; COGs: COG1200 RecG-like helicase; InterProIPR004365:IPR011545:IPR001650:IPR014001:IPR 004609; KEGG: mtt:Ftrac_1994 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG
YP_004773617.1	PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: zpr:ZPR_4528 OmpA/MotB family outer hypothetical protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB family outer membrane protein
YP_004773618.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR006145:IPR000748; KEGG: cpi:Cpin_0677 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F
YP_004773619.1	PFAM: ATPase associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: mtt:Ftrac_2805 atpase associated with various cellular activities aaa_3; PFAM: ATPase associated with various cellular activities, AAA-3; SPTR: ATPase, MoxR family
YP_004773620.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: mtt:Ftrac_2549 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Sensor histidine kinase
YP_004773621.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: mtt:Ftrac_2550 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator
YP_004773622.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; Hypothetical protein Yopt; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cao:Celal_3405 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator
YP_004773623.1	PFAM: PhoH-like protein; COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714:IPR006596; KEGG: mtt:Ftrac_1289 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; SPTR: PhoH family protein
YP_004773624.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; InterPro IPR019229; KEGG: shg:Sph21_5165 hypothetical protein; PFAM: Protein of unknown function DUF2166; SPTR:  uncharacterized protein
YP_004773625.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cao:Celal_1275 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR:  AraC family transcriptional regulatory protein
YP_004773626.1	PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system
YP_004773628.1	PFAM: Prolyl oligopeptidase; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: shg:Sph21_2473 dipeptidyl-peptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Dipeptidyl peptidase IV (DPP IV) N-terminal region domain protein
YP_004773629.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gfo:GFO_2162 secreted beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Secreted beta-lactamase
YP_004773630.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG1521  transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: sli:Slin_6393 Baf family transcriptional regulator; PFAM: Bordetella pertussis Bvg accessory factor; SPTR: Type III pantothenate kinase 2; TIGRFAM: Bordetella pertussis Bvg accessory factor
YP_004773631.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: lby:Lbys_1327 diamine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family
YP_004773632.1	COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: mtt:Ftrac_3307 hypothetical protein; SPTR: von Willebrand factor, type A
YP_004773633.1	COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sli:Slin_0326 Mg-chelatase subunit ChlI-like protein; SPTR:  magnesium chelatase
YP_004773634.1	PFAM: Protein of unknown function (DUF2892); KEGG: mtt:Ftrac_2337 hypothetical protein; SPTR:  uncharacterized protein
YP_004773635.1	PFAM: Prolyl oligopeptidase; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR:  alpha/beta hydrolase
YP_004773636.1	PFAM: DinB family; InterPro IPR007837; KEGG: cpi:Cpin_4454 DinB family protein; PFAM: DinB; SPTR:  uncharacterized protein
YP_004773637.1	PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: mtt:Ftrac_3363 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Thiosulfate sulfurtransferase GlpE
YP_004773638.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR006328:IPR006388; KEGG: gfo:GFO_3460 L-2-haloacid dehalogenase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: L-2-haloacid dehalogenase; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2
YP_004773639.1	PFAM: Protein of unknown function, DUF547; InterPro IPR006869; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF547; SPTR:  uncharacterized protein
YP_004773640.1	KEGG: fps:FP0701 hypothetical protein; SPTR:  uncharacterized protein
YP_004773641.1	PFAM: RimK-like ATP-grasp domain; KEGG: sli:Slin_2496 hypothetical protein; SPTR:  uncharacterized protein
YP_004773642.1	KEGG: shg:Sph21_3228 outer membrane protein; SPTR: Outer membrane protein, OMP85 family
YP_004773643.1	PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: chu:CHU_0382 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR:  uncharacterized protein
YP_004773644.1	KEGG: sli:Slin_2530 hypothetical protein; SPTR:  uncharacterized protein
YP_004773645.1	PFAM: NADPH-dependent FMN reductase; COGs: COG0655 Multimeric flavodoxin WrbA; KEGG: mtt:Ftrac_3396 hypothetical protein; SPTR:  uncharacterized protein
YP_004773646.1	KEGG: shg:Sph21_4181 hypothetical protein; SPTR:  uncharacterized protein
YP_004773647.1	PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02943 family; RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR014284; KEGG: chu:CHU_3097 ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004773648.1	PFAM: META domain; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: phe:Phep_0514 hypothetical protein; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: Lipoprotein
YP_004773649.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: phe:Phep_2313 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004773650.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: chu:CHU_3642 alpha/beta fold family hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase
YP_004773651.1	PFAM: Cellulase (glycosyl hydrolase 5); COGs: COG2730 Endoglucanase; InterPro IPR001547:IPR006311; KEGG: dfe:Dfer_0289 glycoside hydrolase 5; PFAM: Glycoside hydrolase, family 5; SPTR: Endoglucanase
YP_004773652.1	PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005475:IPR005476:IPR005477; KEGG: mtt:Ftrac_1461 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase
YP_004773654.1	PFAM: ScpA/B protein; COGs: COG1354 conserved hypothetical protein; HAMAP: Segregation and condensation protein A; InterPro IPR003768; KEGG: mtt:Ftrac_1460 condensin subunit scpa; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; SPTR: ScpA/B protein
YP_004773655.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: mtt:Ftrac_1459 hypothetical protein; SPTR: Membrane protein
YP_004773656.1	KEGG: sli:Slin_6336 hypothetical protein; SPTR:  uncharacterized protein
YP_004773657.1	PFAM: Nucleoside diphosphate kinase; COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: sli:Slin_6029 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; SMART: Nucleoside diphosphate kinase, core; SPTR: Nucleoside diphosphate kinase
YP_004773658.1	PFAM: DHHA1 domain; DHH family; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: mtt:Ftrac_2530 phosphoesterase RecJ domain protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Dhh family/dhha1 domain protein
YP_004773659.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004773660.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004773661.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mtt:Ftrac_2531 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004773662.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR000644:IPR005990; KEGG: mtt:Ftrac_2373 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase
YP_004773663.1	KEGG: rba:RB343 hypothetical protein; SPTR:  uncharacterized protein
YP_004773664.1	PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: bba:Bd1101  sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: tRNA/rRNA cytosine-C5-methylase (Sun family protein)
YP_004773666.1	KEGG: wvi:Weevi_0876 hypothetical protein; SPTR:  magnesium citrate secondary transporter
YP_004773667.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family  methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556:IPR019874; KEGG: mtt:Ftrac_1493 protein-(glutamine-n5) methyltransferase, release factor-specific; PFAM: Methyltransferase small; SPTR: Protein-(Glutamine-N5) methyltransferase, release factor-specific; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK
YP_004773668.1	KEGG: psn:Pedsa_3110 thiamine pyrophosphokinase; SPTR:  uncharacterized protein
YP_004773669.1	PFAM: 3-hydroxyanthranilic acid dioxygenase; TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase; InterPro IPR010329; KEGG: chu:CHU_3382 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase; SPTR: 3-hydroxyanthranilate 3,4-dioxygenase; TIGRFAM: 3-hydroxyanthranilic acid dioxygenase
YP_004773670.1	PFAM: Aminotransferase class-V; TIGRFAM: kynureninase; COGs: COG3844 Kynureninase; InterPro IPR010111; KEGG: mtt:Ftrac_2835 kynureninase; SPTR: Kynureninase; TIGRFAM: Kynureninase
YP_004773671.1	PFAM: FAD binding domain; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR002938; KEGG: mtt:Ftrac_2836 kynurenine 3-monooxygenase; PFAM: Monooxygenase, FAD-binding; SPTR: Kynurenine 3-monooxygenase
YP_004773672.1	COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: abm:ABSDF2692  D-cysteine desulfhydrase (DcyD); SPTR:  D-cysteine desulfhydrase
YP_004773673.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR006145:IPR006225; KEGG: mtt:Ftrac_1448 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD
YP_004773674.1	KEGG: mtt:Ftrac_0812 hypothetical protein; SPTR:  uncharacterized protein
YP_004773675.1	SPTR:  uncharacterized protein
YP_004773677.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; InterPro IPR004188:IPR002319:IPR004529; KEGG: mtt:Ftrac_2390 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit
YP_004773678.1	TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: mtt:Ftrac_1827 methyltransferase fkbm family; SPTR:  methyltransferase FkbM; TIGRFAM: Methyltransferase FkbM
YP_004773679.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ppd:Ppro_1420 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR:  uncharacterized protein
YP_004773681.1	PFAM: Protein of unknown function (DUF3244); SPTR:  uncharacterized protein
YP_004773682.1	PFAM: AhpC/TSA family; KEGG: chu:CHU_1975 thioredoxin-like protein; SPTR: Thioredoxin-like protein
YP_004773683.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rbi:RB2501_13164 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar phosphate isomerase/epimerase
YP_004773685.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR013221:IPR001608:IPR011079:IPR000821; KEGG: dfe:Dfer_4988  bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; Mur ligase, central; SPTR: Mur ligase domain protein/alanine racemase; TIGRFAM: Alanine racemase
YP_004773686.1	KEGG: mxa:MXAN_2242  lipoprotein; SPTR:  uncharacterized protein
YP_004773687.1	KEGG: shg:Sph21_1807 hypothetical protein; SPTR:  uncharacterized protein
YP_004773688.1	PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: shg:Sph21_3273 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase, M20/M25/M40 family
YP_004773689.1	KEGG: mtt:Ftrac_2476 hypothetical protein; SPTR:  uncharacterized protein
YP_004773690.1	KEGG: shg:Sph21_1479 hypothetical protein; SPTR:  uncharacterized protein
YP_004773691.1	PFAM: Thioredoxin; InterPro IPR013766; KEGG: cly:Celly_3028 thioredoxin domain-containing protein; PFAM: Thioredoxin domain; SPTR: Thioredoxin
YP_004773692.1	PFAM: Protein of unknown function DUF84; TIGRFAM: inosine/xanthosine triphosphatase; COGs: COG1986 conserved hypothetical protein; HAMAP: Protein of unknown function DUF84; InterPro IPR002786; KEGG: mtt:Ftrac_3465 hypothetical protein; PFAM: Protein of unknown function DUF84; SPTR: UPF0244 protein ALPR1_01780; TIGRFAM: Protein of unknown function DUF84
YP_004773693.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: psn:Pedsa_3830 protein of unknown function DUF28; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein ALPR1_01785; TIGRFAM: Protein of unknown function DUF28
YP_004773695.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: lby:Lbys_2555 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase
YP_004773696.1	KEGG: lby:Lbys_2662 hypothetical protein; SPTR:  uncharacterized protein
YP_004773697.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cat:CA2559_05025 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR:  L-aspartate oxidase
YP_004773698.1	PFAM: Bacterial transcription activator, effector binding domain; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: fjo:Fjoh_2178 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SPTR: Transcription activator, effector binding
YP_004773699.1	SPTR:  uncharacterized protein
YP_004773701.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: shg:Sph21_0181 PepSY-associated TM helix domain protein; PFAM: PepSY-associated TM helix; SPTR: Iron uptake protein
YP_004773702.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; KEGG: ppn:Palpr_2095 TonB family protein; SPTR: TonB family protein
YP_004773703.1	PFAM: ABC transporter; TOBE domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439; KEGG: mtt:Ftrac_1666 ABC transporter related protein; PFAM: ABC transporter-like; SPTR: ABC transporter related protein
YP_004773704.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: osp:Odosp_2271 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Redox-sensitive transcriptional activator OxyR
YP_004773705.1	PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: mtt:Ftrac_2603 peptidase M20; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase, M20/M25/M40 family
YP_004773706.1	PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR003834; KEGG: mtt:Ftrac_2502 protein-disulfide reductase; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR:  thiol:disulfide interchange protein DsbD
YP_004773707.1	PFAM: HPP family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: cpi:Cpin_6723 HPP family protein; PFAM: HPP; SPTR: HPP family protein; manually curated
YP_004773708.1	PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: mtt:Ftrac_2597 ferrochelatase; PFAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase
YP_004773709.1	PFAM: HD domain; TIGRFAM: phosphonate degradation operons associated HDIG domain protein; uncharacterized domain HDIG; COGs: COG4341 HD phosphohydrolase; InterPro IPR006674:IPR017670:IPR006675; KEGG: pfl:PFL_5886 HDIG domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Phosphonate degradation operons associated HDIG domain protein; TIGRFAM: Phosphonate degradation operon associated HDIG domain; HDIG
YP_004773710.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR005834:IPR006439; KEGG: dfe:Dfer_3095 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Possible phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1
YP_004773711.1	KEGG: cse:Cseg_3202 hypothetical protein; SPTR:  uncharacterized protein
YP_004773713.1	PFAM: NnrU protein; COGs: COG2020  protein-S-isoprenylcysteine methyltransferase; KEGG: mtt:Ftrac_2288 isoprenylcysteine carboxyl methyltransferase; SPTR:  uncharacterized protein
YP_004773714.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; COGs: COG0274 Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase; InterPro IPR002915:IPR011343; KEGG: mtt:Ftrac_1415 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase
YP_004773715.1	PFAM: Na+/Pi-cotransporter; COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841; KEGG: mtt:Ftrac_1748 Na+/picotransporter; PFAM: Na/Pi-cotransporter; SPTR: Sodium-dependent phosphate transporter 2C
YP_004773716.1	KEGG: mtt:Ftrac_1749 hypothetical protein; SPTR:  uncharacterized protein
YP_004773717.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: chu:CHU_0109 cytosine/adenosine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine/deoxycytidylate deaminase
YP_004773718.1	PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: chu:CHU_0108 superoxide dismutase, manganese; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; SPTR: Superoxide dismutase
YP_004773719.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_3089 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  TonB-dependent receptor
YP_004773720.1	PFAM: MaoC like domain; COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: ppn:Palpr_1388 enoyL-CoA hydratase; PFAM: MaoC-like dehydratase; SPTR: MaoC domain protein
YP_004773721.1	KEGG: phe:Phep_1861 hypothetical protein; SPTR: Chaperone protein ClpB
YP_004773722.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; TIGRFAM: tyrosine recombinase XerD; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: chu:CHU_2702 site-specific recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 2
YP_004773723.1	PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; COGs: COG0757 3-dehydroquinate dehydratase II; HAMAP: Dehydroquinase, class II; InterPro IPR001874; KEGG: cpi:Cpin_2345 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase, class II; SPTR: 3-dehydroquinate dehydratase, type II; TIGRFAM: Dehydroquinase, class II
YP_004773724.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: sli:Slin_2434 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aspartate aminotransferase
YP_004773725.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: sli:Slin_2433 multiple antibiotic resistance (MarC)-related protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR:  multiple antibiotic resistance protein MarC
YP_004773726.1	PFAM: PRC-barrel domain; InterPro IPR007903; KEGG: mem:Memar_0929 PRC-barrel domain-containing protein; PFAM: PRC-barrel; SPTR:  uncharacterized protein
YP_004773728.1	PFAM: Carboxymuconolactone decarboxylase; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR003779:IPR004675; KEGG: cao:Celal_1273 alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core
YP_004773729.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR002109:IPR013027; KEGG: bcl:ABC3038 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004773730.1	PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: cao:Celal_3012 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004773732.1	PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: gfo:GFO_0304 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR: Secreted protein containing DUF302
YP_004773733.1	PFAM: NIPSNAP; InterPro IPR012577; KEGG: sli:Slin_4035 NIPSNAP family containing protein; PFAM: NIPSNAP; SPTR: NIPSNAP family containing protein
YP_004773734.1	PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein
YP_004773735.1	PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR003029:IPR019307:IPR004659; KEGG: mtt:Ftrac_2594 ribonuclease, rne/rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; SPTR: Ribonuclease G; TIGRFAM: Ribonuclease E/G
YP_004773736.1	KEGG: tde:TDE1911 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004773737.1	PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR019734; KEGG: mtt:Ftrac_2593 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR2; SPTR:  uncharacterized protein
YP_004773738.1	PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: mtt:Ftrac_2592 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: DNA-binding protein HU
YP_004773739.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265:IPR003651:IPR005760; KEGG: psn:Pedsa_3127 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; SPTR: A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form
YP_004773740.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: dfe:Dfer_4439 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding
YP_004773741.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170:IPR019862; KEGG: mtt:Ftrac_2589 gliding motility-associated protein glde; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; TIGRFAM: Gliding motility-associated protein GldE
YP_004773742.1	PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: mtt:Ftrac_2525 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; SPTR: Ferredoxin-dependent glutamate synthase 1
YP_004773743.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: mtt:Ftrac_2524 glutamate synthase (NADH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Glutamate synthase, NADH/NADPH small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1
YP_004773744.1	KEGG: ppn:Palpr_0655 hypothetical protein; SPTR:  uncharacterized protein
YP_004773745.1	PFAM: Lipase (class 3); lysophospholipase; OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: cly:Celly_3134 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein
YP_004773746.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: cao:Celal_3514 peptide methionine sulfoxide reductase MsrA; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Peptide methionine sulfoxide reductase MsrA 3; TIGRFAM: Peptide methionine sulphoxide reductase MsrA
YP_004773747.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR003661:IPR003594:IPR000014:IPR 001610; KEGG: lic:LIC12087 histidine kinase sensor protein; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS
YP_004773748.1	PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fps:FP0890 small-conductance mechanosensitive ionchannel MscS1; PFAM: Mechanosensitive ion channel MscS; SPTR: Transmembrane ion channel
YP_004773749.1	PFAM: Protein of unknown function (DUF1706); COGs: COG4283 conserved hypothetical protein; InterPro IPR012550; KEGG: mtt:Ftrac_2925 hypothetical protein; PFAM: Protein of unknown function DUF1706; SPTR:  uncharacterized protein
YP_004773750.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: sun:SUN_1218 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR:  uncharacterized protein
YP_004773752.1	PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: fbc:FB2170_11576 hypothetical protein; SPTR:  uncharacterized protein
YP_004773753.1	PFAM: Protein of unknown function (DUF3127); KEGG: chu:CHU_3583 hypothetical protein; SPTR:  uncharacterized protein
YP_004773754.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: mtt:Ftrac_2582 5-(carboxyamino)imidazole ribonucleotide mutase; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_004773755.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR003135:IPR005875; KEGG: chu:CHU_3733 phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; SPTR: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit
YP_004773756.1	KEGG: cpi:Cpin_0628 hypothetical protein; SPTR:  uncharacterized protein
YP_004773757.1	PFAM: MutS domain V; COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: mtt:Ftrac_2147 DNA mismatch repair protein MutS domain protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; SPTR:  MutS domain protein
YP_004773758.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: cao:Celal_2817 PepSY-associated tm helix domain protein; PFAM: PepSY-associated TM helix; SPTR: PepSY-associated TM helix domain protein
YP_004773759.1	KEGG: cao:Celal_2816 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004773760.1	KEGG: fjo:Fjoh_1254 hypothetical protein; SPTR:  uncharacterized protein
YP_004773761.1	KEGG: dfe:Dfer_1309 hypothetical protein; SPTR:  uncharacterized protein
YP_004773762.1	KEGG: chu:CHU_1839 hypothetical protein; SPTR:  uncharacterized protein
YP_004773763.1	KEGG: zpr:ZPR_1606 hypothetical protein; SPTR:  uncharacterized protein
YP_004773764.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1428 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004773765.1	PFAM: Peptidase propeptide and YPEB domain; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005075:IPR005625; KEGG: PepSY-associated TM helix domain-containing protein; PFAM: Peptidase M4, propeptide, PepSY; PepSY-associated TM helix; SPTR:  iron-regulated transmembrane protein
YP_004773766.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010105; KEGG: gfo:GFO_2191 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_004773767.1	KEGG: fjo:Fjoh_1783 hypothetical protein; SPTR:  uncharacterized protein
YP_004773768.1	PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_3562 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel
YP_004773769.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mtt:Ftrac_2239 methyltransferase type 12; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase
YP_004773770.1	PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain; COGs: COG3424 naringenin-chalcone synthase; InterPro IPR001099:IPR012328; KEGG: psn:Pedsa_1773 chalcone and stilbene synthase domain protein; PFAM: Chalcone/stilbene synthase, N-terminal; Chalcone/stilbene synthase, C-terminal; SPTR:  chalcone synthase (Naringenin-chalcone synthase)
YP_004773771.1	PFAM: UbiA prenyltransferase; InterPro IPR000537; KEGG: dol:Dole_2097 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Prenyltransferase, UbiA family
YP_004773772.1	PFAM: Cytochrome c; Trehalose utilisation; PKD domain; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR000601:IPR003088; KEGG: cpi:Cpin_7275 PKD domain containing protein; PFAM: PKD; Cytochrome c, class I; SMART: PKD; SPTR: Transcriptional regulator, Crp/Fnr family
YP_004773773.1	PFAM: Lycopene cyclase; TIGRFAM: lycopene cyclase; InterPro IPR008671; KEGG: cao:Celal_1771 lycopene beta and epsilon cyclase; PFAM: Lycopene beta/epsilon cyclase; SPTR: Lycopene cyclase
YP_004773774.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: psn:Pedsa_3413 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; SPTR: D-lactate dehydrogenase
YP_004773775.1	KEGG: paa:Paes_1930 hypothetical protein; SPTR:  uncharacterized protein
YP_004773776.1	PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: sli:Slin_1455 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase
YP_004773777.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: Protein translocase subunit secA; InterPro IPR011115:IPR011130:IPR011116:IPR000185; KEGG: mtt:Ftrac_1758 protein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein
YP_004773778.1	KEGG: mtt:Ftrac_1757 sporulation domain-containing protein; SPTR:  uncharacterized protein
YP_004773779.1	PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR010168; KEGG: chu:CHU_0130 N-acyl-L-amino acid amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase, M20D family; TIGRFAM: Peptidase M20D, amidohydrolase
YP_004773780.1	PFAM: S1/P1 Nuclease; InterPro IPR003154; KEGG: shg:Sph21_1546 S1/P1 nuclease; PFAM: S1/P1 nuclease; SPTR: S1/P1 nuclease
YP_004773781.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: shg:Sph21_1137 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Competence protein F-related protein
YP_004773782.1	KEGG: mtt:Ftrac_2383 hypothetical protein; SPTR:  uncharacterized protein
YP_004773783.1	PFAM: Endonuclease/Exonuclease/phosphatase; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: mtt:Ftrac_2382 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth
YP_004773784.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro IPR003594; KEGG: mtt:Ftrac_2380 ATPase ATP-binding protein; PFAM: ATP-binding region, ATPase-like; SPTR: Anti-sigma regulatory factor
YP_004773785.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054; InterPro IPR002036; KEGG: lby:Lbys_1166 hypothetical protein; PFAM: Uncharacterised protein family UPF0054; SPTR: Probable rRNA maturation factor; TIGRFAM: Uncharacterised protein family UPF0054; manually curated
YP_004773786.1	PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR002218:IPR004416; KEGG: chu:CHU_3502 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TIGRFAM: Glucose-inhibited division protein A
YP_004773787.1	PFAM: Methyltransferase domain; COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013217; KEGG: mtt:Ftrac_2377 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11
YP_004773788.1	KEGG: dfe:Dfer_3804 hypothetical protein; SPTR: Lipoprotein
YP_004773789.1	PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: mtt:Ftrac_1687 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family
YP_004773790.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: chu:CHU_3591 multifunctional 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase
YP_004773791.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: mtt:Ftrac_1684 acetyl-CoA acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004773792.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: mtt:Ftrac_1683 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; SPTR: Acyl-CoA dehydrogenase
YP_004773793.1	KEGG: zpr:ZPR_3644 metal-dependent hydrolase; SPTR:  metal-dependent hydrolase
YP_004773794.1	KEGG: dfe:Dfer_2215 hypothetical protein; SPTR:  uncharacterized protein
YP_004773796.1	PFAM: Peptide methionine sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: dfe:Dfer_0925 methionine sulfoxide reductase A; PFAM: Peptide methionine sulphoxide reductase MsrA; SPTR: Methionine sulfoxide reductase A
YP_004773797.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; SPTR: Methionine-R-sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B
YP_004773798.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR000383:IPR013736; KEGG: fbc:FB2170_10211 x-prolyl-dipeptidyl aminopeptidase; SPTR: X-prolyl-dipeptidyl aminopeptidase
YP_004773799.1	PFAM: Redoxin; InterPro IPR013740; KEGG: sgo:SGO_1177 thioredoxin family protein; PFAM: Redoxin; SPTR: Thioredoxin family protein
YP_004773801.1	PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: dfe:Dfer_1372 sigma-70 factor; SPTR: Sigma-70 factor
YP_004773802.1	PFAM: D-ala-D-ala dipeptidase; COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755; KEGG: dfe:Dfer_2827 peptidase M15D VanX D-ala-D-ala dipeptidase; PFAM: Peptidase M15D, vanX D-ala-D-ala dipeptidase; SPTR: D-Ala-D-Ala dipeptidase
YP_004773803.1	PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: cao:Celal_1238 serine 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Serine 3-dehydrogenase
YP_004773804.1	KEGG: mtt:Ftrac_2975 port-related protein; SPTR: PorT-related protein
YP_004773805.1	PFAM: ubiE/COQ5 methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: mtt:Ftrac_2976 demethylmenaquinone methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase
YP_004773806.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR002917:IPR019987; KEGG: cpi:Cpin_7093 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC
YP_004773807.1	KEGG: mtt:Ftrac_3298 hypothetical protein; SPTR:  uncharacterized protein
YP_004773808.1	SPTR:  uncharacterized protein
YP_004773809.1	PFAM: Fructose-1-6-bisphosphatase; COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase; InterPro IPR000146; KEGG: mtt:Ftrac_2848 D-fructose 1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase
YP_004773810.1	PFAM: Amino acid kinase; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048; KEGG: psn:Pedsa_0917 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase
YP_004773811.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: pme:NATL1_20411 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine-phosphatase
YP_004773812.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: chu:CHU_2723 ferric uptake regulation protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein
YP_004773813.1	PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: mtt:Ftrac_1506 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004773814.1	PFAM: GAF domain; PAS fold; InterPro IPR003018:IPR013655; KEGG: zpr:ZPR_1017 two-component system sensor histidine kinase; PFAM: GAF; PAS fold-3; SPTR: Two-component system sensor histidine kinase
YP_004773815.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR008250:IPR005834:IPR006404:IPR006416:IPR 001757; KEGG: cadmium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Cation-transporting ATPase, P-type, zinc-transporting ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004773816.1	PFAM: Pyridoxamine 5'-phosphate oxidase; InterPro IPR011576; KEGG: fbc:FB2170_15881 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein
YP_004773817.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR006311; KEGG: rmr:Rmar_1743 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2
YP_004773818.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1607 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004773819.1	PFAM: Uncharacterised ACR, YkgG family COG1556; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: psl:Psta_3385 hypothetical protein; PFAM: Protein of unknown function DUF162; SPTR:  uncharacterized protein
YP_004773820.1	PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741; KEGG: dfe:Dfer_5745 protein of unknown function DUF162; PFAM: Protein of unknown function DUF162; SPTR:  iron-sulfur cluster binding protein
YP_004773821.1	PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: phe:Phep_2946 hypothetical protein; PFAM: Cysteine-rich region, CCG; SPTR: Oxidoreductase, iron-sulphur binding subunit
YP_004773822.1	KEGG: osp:Odosp_2226 hypothetical protein; SPTR:  uncharacterized protein
YP_004773823.1	KEGG: ppn:Palpr_1566 hypothetical protein; SPTR:  uncharacterized protein
YP_004773824.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: mtt:Ftrac_2792 uroporphyrin-III c/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Tetrapyrrole methylase
YP_004773825.1	PFAM: Protein of unknown function (DUF2905); KEGG: gbm:Gbem_3356 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004773827.1	PFAM: Transposase IS200 like; InterPro IPR002686; KEGG: sli:Slin_4541 transposase IS200-like protein; PFAM: Transposase IS200-like; SPTR: Transposase IS200-like protein
YP_004773828.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: mtt:Ftrac_1787 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase
YP_004773829.1	PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: mtt:Ftrac_1784 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ
YP_004773830.1	PFAM: Yqey-like protein; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: dfe:Dfer_4729 hypothetical protein; SPTR: YqeY family protein
YP_004773831.1	PFAM: Colicin V production protein; InterPro IPR003825; KEGG: mtt:Ftrac_1782 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein
YP_004773832.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991:IPR006221; KEGG: sli:Slin_0655 glutamine amidotransferase; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Anthranilate synthase component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase
YP_004773833.1	InterPro IPR000644; KEGG: mtt:Ftrac_1779 cbs domain containing protein; PFAM: Cystathionine beta-synthase, core; SPTR: CBS domain-containing protein
YP_004773834.1	PFAM: ATP-NAD kinase; COGs: COG0061 sugar kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; InterPro IPR002504; KEGG: chu:CHU_3408 inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase
YP_004773835.1	KEGG: mtt:Ftrac_1776 hypothetical protein; SPTR:  uncharacterized protein
YP_004773836.1	PFAM:  undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP: Undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: sli:Slin_4433 undecaprenyl diphosphate synthase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; SPTR: Di-trans,poly-cis-decaprenylcistransferase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like
YP_004773837.1	PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: mtt:Ftrac_1774 outer membrane protein assembly complex, yaet protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR:  outer membrane protein
YP_004773838.1	PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: mtt:Ftrac_1773 outer membrane chaperone skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, OmpH family
YP_004773839.1	PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: mtt:Ftrac_1772 outer membrane chaperone skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, OmpH family
YP_004773841.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: fbc:FB2170_11436 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004773842.1	SPTR:  uncharacterized protein
YP_004773843.1	InterPro IPR002711:IPR003615; KEGG: HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: Probable restriction endonuclease
YP_004773844.1	PFAM: RNase H; COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: chu:CHU_2706 ribonuclease HI; PFAM: Ribonuclease H; SPTR: Ribonuclease HI
YP_004773845.1	PFAM: Methyltransferase small domain; TIGRFAM: methyltransferase, FkbM family; COGs: COG4123 O-methyltransferase; InterPro IPR007848; KEGG: pha:PSHAa0511 SAM-dependent methyltransferase(YfiC); PFAM: Methyltransferase small; SPTR: SmtA protein
YP_004773846.1	PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: bvu:BVU_0133 glycoside hydrolase; PFAM: Glycoside hydrolase 97; SPTR: Glycoside hydrolase 97 protein
YP_004773847.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sli:Slin_4249 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004773848.1	PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine dehydratase, iron-sulfur-dependent, beta subunit; COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130:IPR004644; KEGG: ran:Riean_1690 L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; SPTR: L-serine dehydratase 1; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form
YP_004773849.1	KEGG: nit:NAL212_2265 hypothetical protein; SPTR: Glucose-6-phosphate 1-dehydrogenase
YP_004773850.1	PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR001440:IPR019734; KEGG: cts:Ctha_1368 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein
YP_004773851.1	PFAM: Protein of unknown function (DUF2442); InterPro IPR018841; KEGG: nhl:Nhal_0244 hypothetical protein; PFAM: Protein of unknown function DUF2442; SPTR:  uncharacterized protein
YP_004773852.1	KEGG: mar:MAE_17860 hypothetical protein; SPTR:  uncharacterized protein
YP_004773853.1	PFAM: DNA alkylation repair enzyme; COGs: COG4912 DNA alkylation repair protein; KEGG: det:DET0581 hypothetical protein; SPTR:  uncharacterized protein
YP_004773854.1	PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: gfo:GFO_2757 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR:  uncharacterized protein
YP_004773855.1	KEGG: gfo:GFO_2755 hypothetical protein; SPTR:  uncharacterized protein
YP_004773856.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_2756 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004773857.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; COGs: COG0295 Cytidine deaminase; InterPro IPR002125; KEGG: cat:CA2559_05460 cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase
YP_004773858.1	PFAM: Phospholipase/Carboxylesterase; InterPro IPR003140; KEGG: mtt:Ftrac_3743 phospholipase/carboxylesterase; PFAM: Phospholipase/carboxylesterase; SPTR:  esterase/lipase
YP_004773859.1	PFAM: Polysaccharide pyruvyl transferase; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: sli:Slin_5831 3-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase, glycosyltransferase 30 protein
YP_004773860.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; COGs: COG1162 GTPase; HAMAP: ribosome biogenesis GTPase RsgA; InterPro IPR004881; KEGG: mtt:Ftrac_3140 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; SPTR:  ribosome biogenesis GTPase RsgA; TIGRFAM: GTPase EngC
YP_004773861.1	PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: dfe:Dfer_4675 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase/pyrimidine operon attenuation protein
YP_004773862.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: mtt:Ftrac_3555 ketopantoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; manually curated
YP_004773863.1	PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: mtt:Ftrac_3556 isocitrate dehydrogenase, nADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type
YP_004773864.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: psn:Pedsa_3792 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase
YP_004773865.1	PFAM: Cytochrome c; COGs: COG4654 Cytochrome c551/c552; InterPro IPR003088; KEGG: cpi:Cpin_7278 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c family protein
YP_004773866.1	PFAM: AP endonuclease 2 C terminus; Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: cpi:Cpin_7279 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: IolE protein
YP_004773867.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: psn:Pedsa_3789 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family
YP_004773868.1	PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; InterPro IPR004740; KEGG: psn:Pedsa_3793  nucleoside permease; PFAM: Nucleoside:H+ symporter; SPTR:  nucleoside permease; manually curated
YP_004773869.1	PFAM: FAD binding domain; GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: FAD dependent oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family
YP_004773870.1	KEGG: shg:Sph21_3640 twin-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal; manually curated
YP_004773871.1	KEGG: shg:Sph21_4771 hypothetical protein; SPTR:  uncharacterized protein
YP_004773872.1	PFAM: Bacterial SH3 domain; InterPro IPR010466:IPR003646; KEGG: chu:CHU_2804 hypothetical protein; PFAM: Protein of unknown function DUF1058; SMART: Bacterial SH3-like region; SPTR:  uncharacterized protein
YP_004773873.1	PFAM: SusD family; InterPro IPR012944; KEGG: gau:GAU_2998  outer membrane protein; PFAM: RagB/SusD; SPTR:  outer membrane protein
YP_004773874.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1920 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein
YP_004773875.1	PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011444; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1549; SPTR:  uncharacterized protein
YP_004773876.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR010869:IPR006311; KEGG: cly:Celly_0452 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR:  uncharacterized protein
YP_004773879.1	PFAM: Predicted membrane protein (DUF2254); COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: cyc:PCC7424_1901 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR:  uncharacterized protein
YP_004773880.1	KEGG: mtt:Ftrac_3138 hypothetical protein; SPTR:  uncharacterized protein
YP_004773881.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: mtt:Ftrac_1261 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004773882.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: NADPH:quinone reductase
YP_004773883.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608:IPR006311; KEGG: llo:LLO_2703 alanine racemase; PFAM: Alanine racemase, N-terminal; SPTR: Low-specificity threonine aldolase
YP_004773884.1	PFAM: Sodium/hydrogen exchanger family; InterPro IPR006153; KEGG: lby:Lbys_1407 sodium/proton antiporter, cpa1 family; PFAM: Cation/H+ exchanger; SPTR: Na(+)/H(+) exchanger family protein
YP_004773885.1	SPTR:  uncharacterized protein
YP_004773886.1	TIGRFAM: conserved hypothetical protein; InterPro IPR011935; KEGG: zpr:ZPR_2072 hypothetical protein; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02231
YP_004773887.1	PFAM: Acetyl xylan esterase (AXE1); BAAT / Acyl-CoA thioester hydrolase C terminal; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: mbr:MONBRDRAFT_27421 hypothetical protein; SPTR: Predicted protein
YP_004773888.1	PFAM: Endoribonuclease L-PSP; COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: phe:Phep_0334 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP
YP_004773889.1	KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR:  uncharacterized protein
YP_004773890.1	KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR:  uncharacterized protein
YP_004773891.1	PFAM:  addiction module component; TIGRFAM:  addiction module component, TIGR02574 family; InterPro IPR013406; PFAM: Addiction module component, CHP02574
YP_004773892.1	PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: dfe:Dfer_3423 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system
YP_004773893.1	KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR:  uncharacterized protein
YP_004773895.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: Steryl-sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004773896.1	PFAM: PHP domain; InterPro IPR004013; KEGG: fbc:FB2170_06425 hypothetical protein; PFAM: PHP, C-terminal; SPTR:  uncharacterized protein
YP_004773897.1	PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; InterPro IPR019052; KEGG: gfo:GFO_3029 hypothetical protein; PFAM: Protein of unknown function DUF2383; SPTR:  uncharacterized protein
YP_004773898.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: shg:Sph21_0520 processing peptidase; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase, M16B family
YP_004773899.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: shg:Sph21_0519 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase M16
YP_004773900.1	PFAM: M61 glycyl aminopeptidase; COGs: COG3975 protease with the C-terminal PDZ domain; InterPro IPR007963; KEGG: dfe:Dfer_4157 peptidase M61 domain protein; PFAM: Peptidase M61; SPTR:  protease
YP_004773901.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34
YP_004773902.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: mtt:Ftrac_1677 ribonuclease P protein component; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P
YP_004773903.1	PFAM: Peptidase S41; TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR005151:IPR001478:IPR004447; KEGG: chu:CHU_0098 C-terminal processing peptidase-3; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl protease; TIGRFAM: Peptidase S41A, C-terminal protease
YP_004773904.1	PFAM: Glycoprotease; TIGRFAM: universal bacterial protein YeaZ; COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905; KEGG: mtt:Ftrac_1674 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Glycoprotease; TIGRFAM: universal protein YeaZ
YP_004773905.1	PFAM: Protein of unknown function (DUF2480); InterPro IPR018914; KEGG: cao:Celal_1619 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR:  uncharacterized protein
YP_004773906.1	PFAM: Domain of unknown function (DUF1961); SPTR:  uncharacterized protein
YP_004773907.1	PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: ppp:PHYPADRAFT_201214 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: Predicted protein
YP_004773908.1	PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: heat shock protein Hsp20; PFAM: Heat shock protein Hsp20; SPTR: HSP20-like chaperone
YP_004773911.1	TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; InterPro IPR006311
YP_004773912.1	PFAM: Amidohydrolase; InterPro IPR006992; KEGG: cak:Caul_0314 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004773914.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: hel:HELO_1150 TRAP transporter large transmembrane protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP-type transport system permease large protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit
YP_004773915.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: bcl:ABC4045 TRAP-type transport system permease small protein; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component
YP_004773916.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: hel:HELO_1148 TRAP transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit
YP_004773917.1	KEGG: mtt:Ftrac_2139 hypothetical protein; SPTR:  uncharacterized protein
YP_004773918.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR012280:IPR005986; KEGG: mtt:Ftrac_2138 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial
YP_004773919.1	KEGG: dfe:Dfer_4993 hypothetical protein; SPTR:  uncharacterized protein
YP_004773920.1	PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR006847:IPR000795:IPR004161:IPR000178:IPR 005225; KEGG: mtt:Ftrac_2449 bacterial translation initiation factor 2 (bif-2); PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein
YP_004773921.1	PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA; COGs: COG0195 Transcription elongation factor; InterPro IPR013735:IPR010213; KEGG: mtt:Ftrac_2448 NusA antitermination factor; PFAM: Transcription factor NusA, N-terminal; SPTR: Transcription termination factor NusA; TIGRFAM: Transcription termination factor NusA
YP_004773922.1	PFAM: Uncharacterised BCR, YhbC family COG0779; HAMAP: Uncharacterised protein family UPF0090, bacteria; InterPro IPR003728:IPR020790; KEGG: mtt:Ftrac_2447 hypothetical protein; PFAM: Uncharacterised protein family UPF0090; SPTR: Ribosome maturation factor rimP
YP_004773923.1	PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803:IPR015273:IPR002308; KEGG: chu:CHU_3418 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; SPTR: Cysteine--tRNA ligase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia
YP_004773924.1	PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: mtt:Ftrac_2480 peptidase M28; PFAM: Peptidase M28; SPTR: Glutamine cyclotransferase-related protein
YP_004773925.1	PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; COGs: COG0153 Galactokinase; InterPro IPR019539:IPR006204:IPR013750:IPR000705; KEGG: cao:Celal_0463 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; SPTR: Galactokinase; TIGRFAM: Galactokinase
YP_004773926.1	KEGG: sdn:Sden_0879 hypothetical protein; SPTR:  uncharacterized protein
YP_004773928.1	KEGG: sbn:Sbal195_1991 hypothetical protein; SPTR:  uncharacterized protein
YP_004773930.1	PFAM: Preprotein translocase subunit SecB; KEGG: ppn:Palpr_0882 protein export chaperone SecB; SPTR: Protein export chaperone SecB
YP_004773932.1	KEGG: csc:Csac_0615 hypothetical protein; SPTR:  uncharacterized protein
YP_004773933.1	PFAM: Phage derived protein Gp49-like (DUF891); InterPro IPR009241; KEGG: cao:Celal_3303 hypothetical protein; PFAM: Protein of unknown function DUF891; SPTR:  uncharacterized protein
YP_004773934.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: wvi:Weevi_0144 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein
YP_004773937.1	PFAM: LytTr DNA-binding domain; InterPro IPR007492; KEGG: fbc:FB2170_11076  two-component response regulator; PFAM: LytTr DNA-binding region; SPTR:  two-component response regulator
YP_004773938.1	PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: mtt:Ftrac_1248 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein
YP_004773939.1	KEGG: mtt:Ftrac_0600 hypothetical protein; SPTR:  uncharacterized protein
YP_004773940.1	PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: mtt:Ftrac_0599 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Hypothetical plasmid-stabilisation protein
YP_004773941.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773942.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773943.1	InterPro IPR001258; KEGG: gfo:GFO_0830 hypothetical protein; PFAM: NHL repeat; SPTR:  uncharacterized protein
YP_004773944.1	PFAM: Helix-turn-helix; RDD family; InterPro IPR001387:IPR010432; KEGG: ppn:Palpr_2307 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; RDD; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein
YP_004773946.1	KEGG: cat:CA2559_03690 hypothetical protein; SPTR:  uncharacterized protein
YP_004773947.1	PFAM: OsmC-like protein; InterPro IPR003718; KEGG: cao:Celal_0708 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR:  uncharacterized protein
YP_004773949.1	PFAM: Domain of unknown function (DUF303); InterPro IPR005181; KEGG: cpi:Cpin_1583 sialate O-acetylesterase; PFAM: Protein of unknown function DUF303, acetylesterase SPTR: Sialic acid-specific 9-O-acetylesterase
YP_004773950.1	PFAM: Aminotransferase class-V; TIGRFAM: 2-aminoethylphosphonate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase; COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192:IPR012703:IPR017688; KEGG: pjd:Pjdr2_4350 2-aminoethylphosphonate/pyruvate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: 2-aminoethylphosphonate--pyruvate transaminase; TIGRFAM: 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate aminotransferase
YP_004773951.1	PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase; COGs: COG4301 conserved hypothetical protein; InterPro IPR019257:IPR017804; KEGG: shg:Sph21_2565 protein of unknown function DUF2260; PFAM: Protein of unknown function DUF2260; SPTR:  uncharacterized protein; TIGRFAM: Methyltransferase-like
YP_004773952.1	PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR017806; KEGG: cly:Celly_3135 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03440
YP_004773953.1	PFAM: Endoribonuclease L-PSP; COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: fbc:FB2170_04510 transcription regulator; PFAM: Endoribonuclease L-PSP; SPTR: Transcription regulator
YP_004773954.1	PFAM: Aminotransferase class-V; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR000192:IPR006311; KEGG: dfe:Dfer_0481 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein
YP_004773955.1	COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: dfe:Dfer_3349 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase
YP_004773956.1	PFAM: Amidohydrolase; COGs: COG3964 amidohydrolase; InterPro IPR013108:IPR006680; KEGG: dfe:Dfer_3350 dihydroorotase; PFAM: Amidohydrolase 1; Amidohydrolase 3; SPTR: Amidohydrolase
YP_004773957.1	PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: cao:Celal_2821 natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; SPTR: Natural resistance-associated macrophage protein
YP_004773958.1	PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: dfe:Dfer_3348 cytochrome c class I; SPTR: Cytochrome c class I
YP_004773960.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: phe:Phep_0328 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004773961.1	KEGG: dfe:Dfer_4978 hypothetical protein; SPTR:  uncharacterized protein
YP_004773962.1	PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: FG-GAP repeat protein
YP_004773963.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Sodium/bile acid symporter family protein
YP_004773964.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter
YP_004773965.1	PFAM: Endoribonuclease L-PSP; COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: shg:Sph21_2959 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP
YP_004773966.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: sli:Slin_3982 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: SMP-30/Gluconolaconase/LRE domain protein
YP_004773967.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR013656:IPR003661:IPR003594:IPR 000014:IPR001610; KEGG: mtt:Ftrac_0032 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004773968.1	PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789:IPR000014; KEGG: cao:Celal_1933 pas/pac sensor protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; PAS; SPTR:  PAS/PAC sensor protein; TIGRFAM: PAS
YP_004773969.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ppn:Palpr_1148 tdp-4-KetO-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Lipopolysaccharide biosynthesis protein
YP_004773970.1	PFAM: Protein of unknown function (DUF502); COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: aas:Aasi_0164 hypothetical protein; PFAM: Protein of unknown function DUF502; SPTR: Membrane protein
YP_004773971.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR003667:IPR010967; KEGG: mtt:Ftrac_1550 NADH:ubiquinone oxidoreductase, subunit E; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit
YP_004773972.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR003667:IPR011292; KEGG: mtt:Ftrac_1551 NADH:ubiquinone oxidoreductase, subunit D; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit
YP_004773973.1	PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR007329:IPR010204; KEGG: mtt:Ftrac_1552 NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit
YP_004773974.1	PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR004338:IPR010966; KEGG: mtt:Ftrac_1553 NADH:ubiquinone oxidoreductase, subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit
YP_004773975.1	PFAM: NQRA C-terminal domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; InterPro IPR008703; KEGG: mtt:Ftrac_1554 NADH:ubiquinone oxidoreductase, subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: Na-translocating NADH-quinone reductase subunit A
YP_004773976.1	PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: chu:CHU_0087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2; TIGRFAM: LytB protein
YP_004773977.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR000623:IPR011994:IPR003136; KEGG: dfe:Dfer_5748 cytidylate kinase; PFAM: Cytidylate kinase region; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase
YP_004773978.1	PFAM: Amidohydrolase; TIGRFAM: adenine deaminase; COGs: COG1001 Adenine deaminase; HAMAP: Adenine deaminase; InterPro IPR006680:IPR006679; KEGG: fps:FP1059 adenine deaminase; PFAM: Amidohydrolase 1; SPTR: Adenine deaminase; TIGRFAM: Adenine deaminase
YP_004773979.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_0345 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase
YP_004773980.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dfe:Dfer_0345 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase
YP_004773981.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004773982.1	PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824:IPR001075; KEGG: dfe:Dfer_4882 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; NIF system FeS cluster assembly, NifU, C-terminal; SPTR: NifU domain protein
YP_004773983.1	PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: aas:Aasi_1194 hypothetical protein; PFAM: Sodium:dicarboxylate symporter; SPTR: Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family
YP_004773984.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: mtt:Ftrac_2969 chorismate synthase; PFAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase
YP_004773985.1	KEGG: mtt:Ftrac_2968 hypothetical protein; SPTR:  uncharacterized protein
YP_004773986.1	KEGG: sli:Slin_5074 hypothetical protein; SPTR:  uncharacterized protein
YP_004773987.1	SPTR: Protein PXR1 (PinX1-related protein 1)
YP_004773988.1	KEGG: bfr:BF0465 hypothetical protein; SPTR:  uncharacterized protein
YP_004773989.1	PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: dfe:Dfer_4068 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Drug resistance ATPase-1
YP_004773990.1	PFAM: Phosphorylase superfamily; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: mtt:Ftrac_3591 purine or other phosphorylase 1; PFAM: Nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase II
YP_004773991.1	PFAM: Rhodanese-like domain; COGs: COG1054 sulfurtransferase; HAMAP: UPF0176 protein yceA; InterPro IPR001763; KEGG: mtt:Ftrac_3590 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: UPF0176 protein ALPR1_03445
YP_004773992.1	TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451:IPR020019; KEGG: sli:Slin_5687 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; SPTR: Acetyltransferase; TIGRFAM: Sialic acid O-acyltransferase, NeuD
YP_004773993.1	PFAM: Protein of unknown function (DUF2851); KEGG: aas:Aasi_0589 hypothetical protein; SPTR:  uncharacterized protein
YP_004773994.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; COGs: COG0284 Orotidine-5'-phosphate decarboxylase; HAMAP: Orotidine 5'-phosphate decarboxylase; InterPro IPR001754:IPR011995; KEGG: mtt:Ftrac_2671 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 2, core
YP_004773995.1	PFAM: Outer membrane lipoprotein carrier protein LolA; COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: chu:CHU_2699 gliding motility-like protein; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: Outer membrane lipoprotein carrier protein LolA
YP_004773996.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: mtt:Ftrac_2669 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: FtsK/SpoIIIE family protein
YP_004773997.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; COGs: COG0167 Dihydroorotate dehydrogenase; HAMAP: Dihydroorotate dehydrogenase; InterPro IPR012135:IPR005719; KEGG: mtt:Ftrac_1484 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 2
YP_004773998.1	KEGG: protein tyrosine phosphatase; SPTR: Probable arsenate reductase
YP_004773999.1	PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family protein
YP_004774000.1	PFAM: Inner membrane protein CreD; COGs: COG4452 Inner membrane protein involved in colicin E2 resistance; InterPro IPR010364; KEGG: cpi:Cpin_0421 hypothetical protein; PFAM: Uncharacterised protein family, inner membrane CreD; SPTR: Inner membrane CreD family protein
YP_004774001.1	PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: lby:Lbys_2090 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase M28
YP_004774002.1	PFAM: Trehalose utilisation; SPTR:  uncharacterized protein
YP_004774003.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774004.1	PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; SPTR: Toxin-antitoxin system, toxin component, MazF family
YP_004774005.1	KEGG: gym:GYMC10_1676 hypothetical protein; SPTR:  uncharacterized protein
YP_004774006.1	PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: fjo:Fjoh_2187 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR:  uncharacterized protein
YP_004774007.1	PFAM: Transposase IS200 like; InterPro IPR002686; KEGG: cch:Cag_0809 transposase; PFAM: Transposase IS200-like; SPTR: Probable transposase
YP_004774008.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR006311; KEGG: glucose-fructose oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Glucose--fructose oxidoreductase (GFOR)
YP_004774009.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: GCN5-like N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR:  uncharacterized protein
YP_004774010.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: psl:Psta_0624 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dyhydrogenase
YP_004774011.1	SPTR:  uncharacterized protein
YP_004774012.1	PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: Cl-channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; SPTR:  uncharacterized protein
YP_004774013.1	PFAM: NAD dependent epimerase/dehydratase; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509:IPR013549:IPR010099; KEGG: mtt:Ftrac_2259 hypothetical protein; PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004774014.1	PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: mtt:Ftrac_1893 peptidase M14 carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Secreted protein containing N-Zinc-dependent carboxypeptidase related domain protein
YP_004774015.1	KEGG: mtt:Ftrac_1414 hypothetical protein; SPTR:  uncharacterized protein
YP_004774016.1	KEGG: cpi:Cpin_0889 hypothetical protein; SPTR:  uncharacterized protein
YP_004774017.1	PFAM: Protein of unknown function (DUF422); COGs: COG2324 membrane protein; InterPro IPR007354; KEGG: mtt:Ftrac_1977 hypothetical protein; PFAM: Protein of unknown function DUF422; SPTR:  uncharacterized protein
YP_004774018.1	PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: psn:Pedsa_2221 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Beta-carotene hydroxylase
YP_004774019.1	PFAM: MerR family regulatory protein; InterPro IPR000551; KEGG: sli:Slin_5173 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Probable transcriptional regulator, MerR family
YP_004774020.1	PFAM: Glucose / Sorbosone dehydrogenase; Cytochrome c; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: fbc:FB2170_15068 L-sorbosone dehydrogenase; PFAM: Cytochrome c, class I; SPTR: L-sorbosone dehydrogenase
YP_004774021.1	PFAM: Domain of unknown function (DUF1083); KEGG: dat:HRM2_08770 GGDEF domain protein (selenocysteine protein); SPTR: GGDEF domain protein (Selenocysteine protein)
YP_004774022.1	PFAM: Amidohydrolase; COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_04535 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase
YP_004774023.1	PFAM: Endoribonuclease L-PSP; COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: dfe:Dfer_1554 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP
YP_004774024.1	PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR006311; KEGG: dfe:Dfer_2440 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein
YP_004774025.1	PFAM: Amidohydrolase; COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: sli:Slin_3965 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase
YP_004774027.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: mtt:Ftrac_1536 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin
YP_004774028.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; Exonuclease; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR013520:IPR004013:IPR011708:IPR004365:IPR 006055:IPR003141:IPR004805; KEGG: mtt:Ftrac_3357 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Exonuclease, RNase T/DNA polymerase III; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Polymerase/histidinol phosphatase, N-terminal; Exonuclease; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit
YP_004774029.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_3216 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004774031.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0615 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004774032.1	KEGG: dfe:Dfer_0616 hypothetical protein; SPTR:  uncharacterized protein
YP_004774034.1	KEGG: dfe:Dfer_3212 hypothetical protein; SPTR:  uncharacterized protein
YP_004774035.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR000005:IPR018060; KEGG: dfe:Dfer_4330 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; Periplasmic binding protein/LacI transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004774036.1	PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: dfe:Dfer_4329 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1
YP_004774037.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: sli:Slin_6585 ROK family protein; PFAM: ROK; SPTR: ROK family protein
YP_004774038.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: pcu:pc1536 hypothetical protein; PFAM: Metallophosphoesterase; SPTR:  uncharacterized protein
YP_004774039.1	PFAM: BNR/Asp-box repeat; COGs: COG4692 neuraminidase (sialidase); KEGG: dfe:Dfer_2863 hypothetical protein; SPTR:  uncharacterized protein
YP_004774040.1	PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: dfe:Dfer_4311 YdjC family protein; PFAM: YdjC-like protein; SPTR: YdjC family protein
YP_004774041.1	PFAM: BNR/Asp-box repeat; COGs: COG4692 neuraminidase (sialidase); KEGG: neuraminidase (sialidase)-like protein; SPTR: Neuraminidase (Sialidase)-like protein
YP_004774042.1	KEGG: sli:Slin_6607 hypothetical protein; SPTR:  uncharacterized protein
YP_004774044.1	KEGG: sli:Slin_6607 hypothetical protein; SPTR:  uncharacterized protein
YP_004774045.1	PFAM: HpcH/HpaI aldolase/citrate lyase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: sli:Slin_6606 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: HpcH/HpaI aldolase
YP_004774046.1	PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; COGs: COG2103 sugar phosphate isomerase; InterPro IPR001347; KEGG: phe:Phep_3400 sugar isomerase (SIS); PFAM: Sugar isomerase (SIS); SPTR: Sugar isomerase (SIS)
YP_004774047.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: sli:Slin_5126 H+transporting two-sector ATPase delta/subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; SPTR: ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein
YP_004774048.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; COGs: COG0055 F0F1-type ATP synthase beta subunit; HAMAP: ATPase, F1 complex, beta subunit; InterProIPR004100:IPR000194:IPR000793:IPR003593:IPR 005722; KEGG: mtt:Ftrac_2649 ATP synthase f1 subcomplex beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase F1, beta subunit; TIGRFAM: ATPase, F1 complex, beta subunit
YP_004774049.1	PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: mtt:Ftrac_2275 nlp/p60 protein; PFAM: NLP/P60; SPTR: Lipoprotein
YP_004774050.1	SPTR:  uncharacterized protein
YP_004774051.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: mtt:Ftrac_1919 dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase
YP_004774052.1	KEGG: mtt:Ftrac_1918 hypothetical protein; SPTR:  uncharacterized protein
YP_004774053.1	PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: mtt:Ftrac_1917 protein translocase subunit YajC; PFAM: YajC; SPTR: Preprotein translocase, YajC subunit; TIGRFAM: YajC
YP_004774054.1	PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Lipoprotein
YP_004774055.1	KEGG: dfe:Dfer_4925 hypothetical protein; SPTR:  uncharacterized protein
YP_004774056.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; COGs: COG0781 Transcription termination factor; InterPro IPR006027:IPR011605; KEGG: mtt:Ftrac_1914 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: Antitermination factor; TIGRFAM: NusB antitermination factor
YP_004774057.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_1913 leucine dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Leucine dehydrogenase LeuDH
YP_004774058.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: sli:Slin_6331 ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, permease/ATP-binding protein, MDR family
YP_004774059.1	KEGG: dfe:Dfer_3799 hypothetical protein; SPTR:  uncharacterized protein
YP_004774060.1	KEGG: fbc:FB2170_01387 hypothetical protein; SPTR: Coagulation factor 5/8 type domain protein
YP_004774061.1	PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; KEGG: phe:Phep_4286 class I and II aminotransferase; SPTR:  uncharacterized protein
YP_004774062.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: dfe:Dfer_3890 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Chloromuconate cycloisomerase YkfB1
YP_004774063.1	PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: shg:Sph21_3888 peptidase M14 carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SPTR:  uncharacterized protein
YP_004774064.1	PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: psn:Pedsa_2158 methyltransferase type 11; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11
YP_004774065.1	PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; COGs: COG1066 ATP-dependent serine protease; InterPro IPR003593:IPR004504; KEGG: dfe:Dfer_4772 DNA repair protein RadA; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA
YP_004774066.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase A; TIGRFAM: DNA polymerase I; COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR020046:IPR020047:IPR002562:IPR001098:IPR 002421:IPR008918:IPR018320; KEGG: mtt:Ftrac_3236 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1
YP_004774067.1	KEGG: phe:Phep_0416 hypothetical protein; SPTR: Seryl-tRNA synthetase
YP_004774068.1	KEGG: mtt:Ftrac_0205 hypothetical protein; SPTR:  uncharacterized protein
YP_004774070.1	SPTR:  uncharacterized protein
YP_004774071.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058:IPR004527; KEGG: mtt:Ftrac_2517 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamate--tRNA ligase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial
YP_004774072.1	KEGG: dfe:Dfer_4263 hypothetical protein; SPTR:  uncharacterized protein
YP_004774073.1	KEGG: ppn:Palpr_0374 hypothetical protein; SPTR:  uncharacterized protein
YP_004774074.1	KEGG: mtt:Ftrac_3266 tetratricopeptide tpr_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_1 repeat-containing protein
YP_004774075.1	KEGG: mtt:Ftrac_3265 hypothetical protein; SPTR:  uncharacterized protein
YP_004774076.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: mtt:Ftrac_3264 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR:  uncharacterized protein; TIGRFAM: Protein of unknown function DUF37
YP_004774077.1	KEGG: mtt:Ftrac_3263 hypothetical protein; SPTR:  uncharacterized protein
YP_004774079.1	SPTR:  uncharacterized protein
YP_004774080.1	PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR013542:IPR001450; KEGG: mtt:Ftrac_3353 hypothetical protein; PFAM: Domain of unknown function DUF1730; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR:  iron-sulfur cluster-binding protein
YP_004774081.1	PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR008824:IPR003959:IPR008823:IPR003593:IPR 004605; KEGG: mtt:Ftrac_3352 holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type
YP_004774082.1	PFAM: ApbE family; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: mtt:Ftrac_2966 ApbE family lipoprotein; PFAM: ApbE-like lipoprotein; SPTR: Thiamin biosynthesis lipoprotein ApbE
YP_004774083.1	PFAM: ZIP Zinc transporter; InterPro IPR003689; KEGG: mtt:Ftrac_2964 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: Zinc/iron permease
YP_004774084.1	PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: sul:SYO3AOP1_0689 glycosyl transferase 39; PFAM: Glycosyl transferase, family 39; SPTR: Membrane protein
YP_004774085.1	KEGG: dfe:Dfer_4325 hypothetical protein; SPTR:  uncharacterized protein
YP_004774086.1	KEGG: cao:Celal_3215 hypothetical protein; SPTR:  uncharacterized protein
YP_004774087.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase
YP_004774088.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: bth:BT_2621 hypothetical protein; PFAM: Lipase, GDSL; SPTR: Sialate O-acetylesterase
YP_004774089.1	InterPro IPR000537; KEGG: lic:LIC12672 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR:  uncharacterized protein
YP_004774090.1	PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: sli:Slin_1748 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12
YP_004774091.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: sli:Slin_4518 hypothetical protein; SPTR:  uncharacterized protein
YP_004774092.1	PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR010918; KEGG: mtt:Ftrac_2021 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; SPTR:  phosphoribosylformylglycinamidine cyclo-ligase
YP_004774093.1	PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR001440:IPR011659:IPR006665:IPR019734; KEGG: mtt:Ftrac_3322 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Tetratricopeptide TPR-1; WD40-like Beta Propeller; SMART: Tetratricopeptide repeat; SPTR: Outer membrane protein, peptidoglycan-associated lipoprotein
YP_004774094.1	KEGG: mtt:Ftrac_3321 hypothetical protein; SPTR:  uncharacterized protein
YP_004774095.1	PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: mtt:Ftrac_2753 hypothetical protein; PFAM: Cysteine-rich region, CCG; SPTR: Iron-sulfur cluster-binding protein
YP_004774096.1	COGs: COG0247 Fe-S oxidoreductase; KEGG: mtt:Ftrac_2754 oxidoreductase, fe-s subunit; SPTR:  uncharacterized protein
YP_004774097.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR:  RNA polymerase sigma-H factor; TIGRFAM: RNA polymerase sigma-70
YP_004774098.1	SPTR:  uncharacterized protein
YP_004774099.1	KEGG: cpi:Cpin_5460 hypothetical protein; SPTR:  uncharacterized protein
YP_004774100.1	SPTR:  uncharacterized protein
YP_004774101.1	PFAM: Copper/zinc superoxide dismutase (SODC); COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424; KEGG: zpr:ZPR_2436 Cu/Zn superoxide dismutase; PFAM: Superoxide dismutase, copper/zinc binding; SPTR: Superoxide dismutase [Cu-Zn]
YP_004774102.1	KEGG: fjo:Fjoh_4706 glyoxalase/bleomycin resistance protein/dioxygenase; SPTR:  uncharacterized protein
YP_004774103.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: cat:CA2559_00245 site-specific DNA-methyltransferase; PFAM: DNA methylase, C-5 cytosine-specific; SPTR: Cytosine-specific methyltransferase; TIGRFAM: DNA methylase, C-5 cytosine-specific
YP_004774104.1	KEGG: cyc:PCC7424_4761 hypothetical protein; SPTR:  uncharacterized protein
YP_004774105.1	SPTR:  uncharacterized protein
YP_004774106.1	KEGG: cat:CA2559_00250 hypothetical protein; SPTR:  uncharacterized protein
YP_004774108.1	KEGG: ran:Riean_1882 hypothetical protein; SPTR:  uncharacterized protein
YP_004774109.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: shg:Sph21_2558 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator
YP_004774110.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: shg:Sph21_2559 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Two-component sensor histidine kinase
YP_004774111.1	PFAM: Protein of unknown function (DUF2874); KEGG: shg:Sph21_2560 hypothetical protein; SPTR:  uncharacterized protein
YP_004774112.1	PFAM: Phosphate-selective porin O and P; InterPro IPR010870; KEGG: mtt:Ftrac_3113 phosphate-selective porin o and P; PFAM: Phosphate-selective porin O/P; SPTR: Phosphate-selective porin O and P
YP_004774113.1	KEGG: mpd:MCP_0932 hypothetical protein; SPTR:  uncharacterized protein
YP_004774114.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase
YP_004774115.1	PFAM: YceI-like domain; InterPro IPR007372; KEGG: cly:Celly_2528 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YceI family protein
YP_004774117.1	PFAM: Beta-galactosidase; KEGG: msv:Mesil_2394 beta-galactosidase; SPTR:  uncharacterized protein
YP_004774118.1	PFAM: TfoX N-terminal domain; KEGG: coc:Coch_0534 hypothetical protein; SPTR:  uncharacterized protein
YP_004774119.1	KEGG: sli:Slin_4939 hypothetical protein; SPTR:  uncharacterized protein
YP_004774120.1	PFAM: Bacterial alpha-L-rhamnosidase; InterPro IPR008902; KEGG: phe:Phep_0959 alpha-L-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; SPTR: Alpha-L-rhamnosidase
YP_004774121.1	PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; InterPro IPR005144:IPR013509:IPR000788:IPR013346; KEGG: mtt:Ftrac_1814 ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit
YP_004774122.1	PFAM: Ribonucleotide reductase, small chain; COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358; KEGG: aas:Aasi_0535 hypothetical protein; PFAM: Ribonucleotide reductase; SPTR: Ribonucleoside-diphosphate reductase, beta subunit
YP_004774124.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787; KEGG: mtt:Ftrac_1817 LSU ribosomal protein l21p; PFAM: Ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21
YP_004774125.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: wvi:Weevi_1116 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27
YP_004774126.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; InterPro IPR003489; KEGG: sli:Slin_1845 hypothetical protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR:  uncharacterized protein
YP_004774127.1	PFAM: Rhomboid family; InterPro IPR002610; KEGG: mtt:Ftrac_1504 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Cytoplasmic membrane protein
YP_004774128.1	PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mtt:Ftrac_1505 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase
YP_004774129.1	PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; COGs: COG0557 Exoribonuclease R; InterProIPR011129:IPR013223:IPR001900:IPR003029:IPR 011805:IPR004476; KEGG: mtt:Ftrac_1053 RNAse R; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain; SPTR: Ribonuclease R; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria
YP_004774130.1	PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; InterPro IPR019288; KEGG: dfe:Dfer_3714 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR:  uncharacterized protein
YP_004774131.1	KEGG: mtt:Ftrac_0792 hypothetical protein; SPTR:  uncharacterized protein
YP_004774132.1	PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: lipoate-protein ligase B; COGs: COG0321 Lipoate-protein ligase B; HAMAP: Octanoyltransferase; InterPro IPR000544:IPR004143; KEGG: dfe:Dfer_3712 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Octanoyltransferase; TIGRFAM: Octanoyltransferase
YP_004774133.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: sli:Slin_5877 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein ALPR1_19103; TIGRFAM: Uncharacterised protein family UPF0102
YP_004774134.1	KEGG: mtt:Ftrac_3451 hypothetical protein; SPTR:  uncharacterized protein
YP_004774135.1	PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: mtt:Ftrac_1765 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aspartate transaminase
YP_004774136.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: bfr:BF0223 hypothetical protein; PFAM: Glycosyl transferase, family 2; SPTR:  uncharacterized protein
YP_004774137.1	KEGG: cpi:Cpin_2014 outer membrane insertion C-terminal signal; SPTR:  uncharacterized protein
YP_004774138.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_3376 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004774139.1	KEGG: dfe:Dfer_3219 hypothetical protein; SPTR:  uncharacterized protein
YP_004774140.1	KEGG: mtt:Ftrac_2134 hypothetical protein; SPTR:  uncharacterized protein
YP_004774141.1	PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; COGs: COG0620 Methionine synthase II (cobalamin-independent); HAMAP:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; InterPro IPR006276:IPR013215:IPR002629; KEGG: fjo:Fjoh_1519 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase; TIGRFAM:5-methyltetrahydropteroyltriglutamate--homo cysteineS-methyltransferase
YP_004774142.1	InterPro IPR001258; KEGG: dfe:Dfer_4570 NHL repeat containing protein; PFAM: NHL repeat; SPTR: NHL repeat containing protein
YP_004774143.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR010869:IPR006311; KEGG: dfe:Dfer_2202 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR:  uncharacterized protein
YP_004774144.1	PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_2203 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR:  uncharacterized protein
YP_004774146.1	PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR011462; KEGG: zpr:ZPR_4196 hypothetical protein; SPTR: Predicted transposase
YP_004774147.1	KEGG: mtt:Ftrac_0440 hypothetical protein; SPTR:  uncharacterized protein
YP_004774148.1	KEGG: mtt:Ftrac_0440 hypothetical protein; SPTR:  uncharacterized protein
YP_004774149.1	KEGG: mtt:Ftrac_0440 hypothetical protein; SPTR:  uncharacterized protein
YP_004774150.1	KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR:  uncharacterized protein
YP_004774151.1	PFAM: Helix-turn-helix; COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: fba:FIC_01723 DNA-binding protein; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator
YP_004774152.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774153.1	PFAM: Ligand-gated ion channel; Bacterial extracellular solute-binding proteins, family 3; InterPro IPR001320:IPR001638:IPR013099; KEGG: pha:PSHAa0590 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; Ion transport 2; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Ionotropic glutamate receptor
YP_004774154.1	PFAM: SpoU rRNA Methylase; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: mtt:Ftrac_2298 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: tRNA/rRNA methyltransferase (SpoU)
YP_004774155.1	PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR007696:IPR000432:IPR005748:IPR007695:IPR 007860:IPR007861; KEGG: mtt:Ftrac_2299 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS, type 1
YP_004774156.1	PFAM: Two component regulator propeller; COGs: COG3292 periplasmic ligand-binding sensor domain; InterPro IPR011110; KEGG: sli:Slin_6607 hypothetical protein; SPTR:  uncharacterized protein
YP_004774157.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: cao:Celal_3888 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase
YP_004774159.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1700 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC subunit C; manually curated
YP_004774160.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  GIY-YIG catalytic domain protein
YP_004774161.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  GIY-YIG catalytic domain protein
YP_004774162.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  GIY-YIG catalytic domain protein
YP_004774163.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: cly:Celly_0803 excinuclease ABC subunit C domain-containing protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  GIY-YIG catalytic domain protein
YP_004774164.1	PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: fbc:FB2170_02140 hypothetical protein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR:  uncharacterized protein
YP_004774165.1	PFAM: Calcineurin-like phosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: fbc:FB2170_06300  phosphohydrolase; PFAM: Metallophosphoesterase; SPTR: Predicted phosphohydrolase
YP_004774166.1	PFAM: LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR005119; KEGG: LysR family transcriptional regulator; PFAM: LysR, substrate-binding; SPTR: Bacterial regulatory protein, LysR family
YP_004774168.1	PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: swp:swp_4142  cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR:  uncharacterized protein
YP_004774169.1	PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: cly:Celly_2854 electron transport protein SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR:  uncharacterized protein
YP_004774170.1	PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; KEGG: cly:Celly_2853 MORN variant repeat-containing protein; SPTR: Hypothetical exported 24-amino acid repeat protein
YP_004774171.1	KEGG: sli:Slin_5144 hypothetical protein; SPTR:  uncharacterized protein
YP_004774172.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774173.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774174.1	KEGG: fjo:Fjoh_3289 hypothetical protein; SPTR:  uncharacterized protein
YP_004774175.1	KEGG: cly:Celly_3043 protein containing PKD domain-containing protein; SPTR:  uncharacterized protein
YP_004774177.1	PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: gfo:GFO_3452 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR:  uncharacterized protein
YP_004774178.1	PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: fbc:FB2170_01592 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR:  uncharacterized protein
YP_004774179.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: sco:SCO2888 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004774181.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: 2,3-diaminopropionate biosynthesis protein SbnA; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: zpr:ZPR_2189 pyridoxal-phosphate dependent enzyme; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Cysteine synthase
YP_004774182.1	COGs: COG4529 conserved hypothetical protein; KEGG: zpr:ZPR_2189 pyridoxal-phosphate dependent enzyme; SPTR: Cysteine synthase
YP_004774183.1	PFAM: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: zpr:ZPR_2190 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Probable diaminopimelate decarboxylase
YP_004774184.1	KEGG: psn:Pedsa_1674 hypothetical protein; SPTR:  uncharacterized protein
YP_004774185.1	KEGG: psn:Pedsa_1673 hypothetical protein; SPTR:  uncharacterized protein
YP_004774186.1	KEGG: sbn:Sbal195_4549 hypothetical protein; SPTR: ORF182
YP_004774189.1	PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: scl:sce1370 dihydrofolate reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Riboflavin biosynthesis protein RibD
YP_004774190.1	PFAM: Staphylococcal nuclease homologue; COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021; KEGG: fba:FIC_01092 prophage LambdaCh01, nuclease domain protein; PFAM: Staphylococcal nuclease (SNase-like); SMART: Staphylococcal nuclease (SNase-like); SPTR: Prophage LambdaCh01, nuclease domain protein
YP_004774191.1	TIGRFAM: RHS repeat-associated core domain; KEGG: lby:Lbys_3290 cell wall-associated protein precursor; SPTR:  cell wall-associated protein; TIGRFAM: RHS repeat-associated core domain-containing protein
YP_004774193.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060; KEGG: fbc:FB2170_00290 transcriptional regulator; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator
YP_004774194.1	KEGG: fbc:FB2170_00295 hypothetical protein; SPTR:  uncharacterized protein
YP_004774195.1	PFAM: Domain of unknown function (DUF1772); COGs: COG5500 integral membrane protein; InterPro IPR018726; KEGG: fbc:FB2170_00300  integral-membrane protein; PFAM: Protein of unknown function DUF2266, transmembrane; SPTR: Probable integral-membrane protein
YP_004774196.1	PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: fbc:FB2170_00305 hypothetical protein; SPTR:  uncharacterized protein
YP_004774198.1	PFAM: MBOAT family; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: cly:Celly_2622 membrane bound O-acyl transferase MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Alginate O-acetylation protein
YP_004774199.1	KEGG: wvi:Weevi_0565 hypothetical protein; SPTR:  uncharacterized protein
YP_004774200.1	PFAM: DNA alkylation repair enzyme; COGs: COG4912 DNA alkylation repair protein; InterPro IPR014825; KEGG: fbc:FB2170_07649 hypothetical protein; PFAM: DNA alkylation repair enzyme; SPTR:  uncharacterized protein
YP_004774201.1	PFAM: Endonuclease/Exonuclease/phosphatase; InterPro IPR005135; KEGG: bvu:BVU_0401 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR:  uncharacterized protein
YP_004774202.1	PFAM: Formate/nitrite transporter; COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: zpr:ZPR_2292 formate/nitrite transporter; PFAM: Formate/nitrite transporter; SPTR: Formate/nitrite transporter family (FNT)
YP_004774203.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cpi:Cpin_5598 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family
YP_004774204.1	PFAM: Protein of unknown function (DUF3244); KEGG: fbc:FB2170_16051 hypothetical protein; SPTR:  uncharacterized protein
YP_004774205.1	KEGG: tva:TVAG_377900 F5/8 type C domain containing protein; SPTR: Alpha-N-acetylgalactosaminidase
YP_004774206.1	KEGG: psl:Psta_3483 hypothetical protein; SPTR:  uncharacterized protein
YP_004774208.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR013027; KEGG: pbs:Plabr_1496  xanthan lyase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR:  xanthan lyase
YP_004774209.1	InterPro IPR013517; KEGG: pbs:Plabr_4234 FG-GAP repeat protein; PFAM: FG-GAP; SPTR:  uncharacterized protein
YP_004774210.1	PFAM: Periplasmic binding protein; COGs: COG4558 ABC-type hemin transport system periplasmic component; InterPro IPR002491; KEGG: cpi:Cpin_7224 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein
YP_004774211.1	PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: alv:Alvin_1690 transport system permease; PFAM: Bacterial transport system permease; SPTR: Transport system permease
YP_004774212.1	PFAM: ABC transporter; COGs: COG4559 ABC-type hemin transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: alv:Alvin_1691 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein
YP_004774213.1	PFAM: Haemin-degrading HenS.ChuX domain; COGs: COG3720  heme degradation protein; InterPro IPR007845; KEGG: cpi:Cpin_7221 haemin-degrading protein; PFAM: Haemin-degrading; SPTR: Hemin transport protein HmuS
YP_004774214.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6535 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Colicin I receptor
YP_004774215.1	KEGG: fjo:Fjoh_0248 hypothetical protein; SPTR:  uncharacterized protein
YP_004774217.1	PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: MORN variant repeat-containing protein; PFAM: MORN variant; SPTR:  uncharacterized protein
YP_004774218.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774219.1	PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: sur:STAUR_2747 sterol desaturase; PFAM: Fatty acid hydroxylase; SPTR:  desaturase
YP_004774220.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013747; KEGG: cpi:Cpin_2173 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase
YP_004774221.1	KEGG: sur:STAUR_2746 hypothetical protein; SPTR: Conserved uncharacterized protein
YP_004774222.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM:  quinone oxidoreductase, YhdH/YhfP family; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149:IPR014188; KEGG: cpb:Cphamn1_1510 quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase, zinc-containing; TIGRFAM: Quinone oxidoreductase , YhdH/YhfP
YP_004774223.1	PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cpi:Cpin_0639 HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR:  transcriptional regulator
YP_004774224.1	PFAM: NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: psn:Pedsa_0619 male sterility domain protein; SPTR: Male sterility domain protein
YP_004774225.1	PFAM: Ion channel; KEGG: gfo:GFO_1177 hypothetical protein; SPTR:  uncharacterized protein
YP_004774226.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: hse:Hsero_3977 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR:  oxidoreductase
YP_004774227.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: reh:H16_A1557 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleoside-diphosphate-sugar epimerase
YP_004774228.1	PFAM: GntP family permease; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: dfe:Dfer_1410 gluconate transporter; PFAM: Gluconate transporter; SPTR: GntP family permease
YP_004774229.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: mtt:Ftrac_2499 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00730
YP_004774230.1	PFAM: Transglycosylase SLT domain; InterPro IPR008258; KEGG: zpr:ZPR_2042 lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Lytic murein transglycosylase
YP_004774231.1	KEGG: phe:Phep_0258 hypothetical protein; SPTR:  uncharacterized protein
YP_004774232.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439:IPR004602; KEGG: mtt:Ftrac_1714 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit
YP_004774233.1	KEGG: mtt:Ftrac_2804 hypothetical protein; SPTR:  outer membrane lipoprotein
YP_004774234.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2803 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  outer membrane protein
YP_004774235.1	KEGG: mtt:Ftrac_3129 hypothetical protein; SPTR:  uncharacterized protein
YP_004774236.1	PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR015391:IPR000297; KEGG: mtt:Ftrac_1859 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase (Survival protein)
YP_004774237.1	KEGG: mtt:Ftrac_1858 hypothetical protein; SPTR:  uncharacterized protein
YP_004774238.1	PFAM: PPIC-type PPIASE domain; COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: chu:CHU_0192 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR:  PPIC-type PPIASE domain protein
YP_004774239.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro IPR003594; KEGG: mtt:Ftrac_1856 hypothetical protein; PFAM: ATP-binding region, ATPase-like; SPTR:  anti-sigma B factor
YP_004774240.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: mtt:Ftrac_1855 anti-anti-sigma factor; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist
YP_004774241.1	PFAM: Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932:IPR010822; KEGG: mtt:Ftrac_1854 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Protein serine/threonine phosphatase
YP_004774243.1	PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR006311; KEGG: dfe:Dfer_2440 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein
YP_004774244.1	PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: sli:Slin_3912 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR:  uncharacterized protein
YP_004774245.1	PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: mtt:Ftrac_0054 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; SPTR: Deoxyribodipyrimidine photolyase
YP_004774246.1	KEGG: mtt:Ftrac_0055 hypothetical protein; SPTR:  outer membrane insertion C-signal
YP_004774247.1	PFAM: Glycoprotease; TIGRFAM:  glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: O-sialoglycoprotein endopeptidase; InterPro IPR000905:IPR017861; KEGG: dfe:Dfer_3012 metalloendopeptidase, glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM:  glycoprotease GCP; Peptidase M22, glycoprotease, subgroup
YP_004774248.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: lby:Lbys_2545 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein
YP_004774249.1	PFAM: NlpC/P60 family; KEGG: mtt:Ftrac_0059 nlp/p60 protein; SPTR:  uncharacterized protein
YP_004774250.1	PFAM: HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR003615:IPR002711; KEGG: mtt:Ftrac_0060 hnh endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein
YP_004774251.1	PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0539 Ribosomal protein S1; InterPro IPR003029; KEGG: mtt:Ftrac_0855 SSU ribosomal protein s1p; PFAM: Ribosomal protein S1, RNA binding domain; SPTR: Ribosomal protein S1
YP_004774252.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910; KEGG: lby:Lbys_1558 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004774253.1	PFAM: Protein of unknown function, DUF255; KEGG: cao:Celal_0334 hypothetical protein; SPTR:  uncharacterized protein
YP_004774254.1	PFAM: Class III cytochrome C family; Cytochrome c; InterPro IPR003088; KEGG: mtt:Ftrac_3686 quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit; PFAM: Cytochrome c, class I; SPTR:  Cytochrome c
YP_004774255.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311; KEGG: mtt:Ftrac_3687 quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; SPTR:  iron-sulfur binding oxidoreductase
YP_004774256.1	PFAM: Polysulphide reductase, NrfD; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: mtt:Ftrac_3688 quinol:cytochrome c oxidoreductase quinone-binding subunit 1; PFAM: Polysulphide reductase, NrfD; SPTR: Oxidoreductase membrane subunit, NrfD family
YP_004774257.1	PFAM: Protein of unknown function (DUF3341); KEGG: mtt:Ftrac_3689 quinol:cytochrome c oxidoreductase membrane protein; SPTR:  uncharacterized protein
YP_004774258.1	PFAM: Cytochrome c; KEGG: mtt:Ftrac_3690 cytochrome c family protein; SPTR: Cytochrome c family protein
YP_004774259.1	KEGG: mtt:Ftrac_3691 quinol:cytochrome c oxidoreductase quinone-binding subunit 2; SPTR: Membrane protein
YP_004774260.1	PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429; KEGG: mtt:Ftrac_3692 cytochrome c oxidase subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; SPTR: Heme/copper-type cytochrome/quinol oxidase, subunit 2
YP_004774261.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: mtt:Ftrac_3693 cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, subunit I
YP_004774262.1	PFAM: Cytochrome oxidase assembly protein; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: mtt:Ftrac_3694 cytochrome oxidase assembly; PFAM: Cytochrome oxidase assembly; SPTR: Cytochrome oxidase assembly protein
YP_004774263.1	PFAM: UbiA prenyltransferase; TIGRFAM: protoheme IX farnesyltransferase; COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); HAMAP: Protohaem IX farnesyltransferase; InterPro IPR006369:IPR000537; KEGG: mtt:Ftrac_3695 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase
YP_004774264.1	PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: mtt:Ftrac_3696 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III
YP_004774265.1	PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: mtt:Ftrac_3697 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase, subunit III
YP_004774266.1	KEGG: mtt:Ftrac_3698 hypothetical protein; SPTR:  uncharacterized protein
YP_004774267.1	PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: sli:Slin_5677 electron transporter SCO1/SenC; PFAM: Copper chaperone SCO1/SenC; SPTR: SCO1/SenC family protein
YP_004774268.1	PFAM: Protein of unknown function (DUF420); COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: sli:Slin_5678 hypothetical protein; PFAM: Protein of unknown function DUF420; SPTR: Membrane protein
YP_004774269.1	KEGG: mtt:Ftrac_3701 hypothetical protein; SPTR:  uncharacterized protein
YP_004774270.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003661:IPR003594:IPR003660; KEGG: sli:Slin_3020 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR:  His Kinase A (Phosphoacceptor) domain protein
YP_004774271.1	KEGG: chu:CHU_2196 hypothetical protein; SPTR:  uncharacterized protein
YP_004774272.1	PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: mtt:Ftrac_3478 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase
YP_004774273.1	PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; InterPro IPR004588; KEGG: chu:CHU_2192 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_004774274.1	KEGG: dfe:Dfer_0460 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004774275.1	PFAM: Protein of unknown function (DUF419); COGs: COG2315 conserved hypothetical protein; InterPro IPR007351; KEGG: mtt:Ftrac_0023 hypothetical protein; SPTR: Hypothetical Cytosolic Protein
YP_004774276.1	PFAM: ABC transporter; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: lby:Lbys_1593 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Spermidine/putrescine import ATP-binding protein PotA
YP_004774277.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; KEGG: dfe:Dfer_1067 peptidylprolyl isomerase (FKBP-type peptidyl-prolyl cis-trans isomerase); SPTR: Peptidyl-prolyl cis-trans isomerase SlyD, FKBP-type
YP_004774278.1	PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase; COGs: COG3254 conserved hypothetical protein; InterPro IPR008000:IPR013448; KEGG: sli:Slin_1807 L-rhamnose 1-epimerase; PFAM: Rhamnose mutarotase; SPTR: L-rhamnose 1-epimerase; TIGRFAM: L-rhamnose 1-epimerase
YP_004774279.1	PFAM: Glycosyl hydrolases family 2, sugar binding domain; InterPro IPR006104; KEGG: shg:Sph21_0466 glycoside hydrolase 2 sugar binding protein; PFAM: Glycoside hydrolase 2, carbohydrate-binding; SPTR:  uncharacterized protein
YP_004774280.1	PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: zpr:ZPR_1548 regulatory protein GntR, HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR:  transcriptional regulator
YP_004774281.1	COGs: COG1457 Purine-cytosine permease and related protein; KEGG: rmr:Rmar_0690 transmembrane prediction; SPTR:  nucleoside transport protein
YP_004774282.1	KEGG: pbs:Plabr_3136 hypothetical protein
YP_004774283.1	SPTR:  uncharacterized protein
YP_004774284.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_2180 RNA polymerase, sigma subunit, ecf family; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004774285.1	KEGG: dfe:Dfer_3626 hypothetical protein; SPTR:  uncharacterized protein
YP_004774286.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651:IPR005759; KEGG: mtt:Ftrac_2182 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SPTR: Endonuclease III; TIGRFAM: Endonuclease III/Nth
YP_004774287.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583:IPR001962; KEGG: chu:CHU_3693 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; SPTR: Asparagine synthetase B
YP_004774288.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mtt:Ftrac_2787 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: A-glycosyltransferase-related protein, glycosyltransferase 4 protein
YP_004774289.1	TIGRFAM: gliding motility-associated lipoprotein GldB; InterPro IPR019853; KEGG: aas:Aasi_0778 hypothetical protein; SPTR: Gliding motility-associated lipoprotein GldB; TIGRFAM: Gliding motility-associated lipoprotein, GldB
YP_004774290.1	PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: dfe:Dfer_1823 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Fasciclin domain protein
YP_004774291.1	PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: psn:Pedsa_3227 polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR:  capsule polysaccharide export protein
YP_004774292.1	PFAM: Chain length determinant protein; InterPro IPR003856; KEGG: psn:Pedsa_3229 lipopolysaccharide biosynthesis protein; PFAM: Lipopolysaccharide biosynthesis; SPTR:  uncharacterized protein
YP_004774293.1	PFAM: Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: dte:Dester_1359 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein
YP_004774294.1	PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mfv:Mfer_1072 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Rhamnosyl transferase
YP_004774295.1	SPTR:  uncharacterized protein
YP_004774296.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mae:Maeo_0394 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004774297.1	PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: hypothetical protein; SPTR: Galactoside O-acetyltransferase
YP_004774298.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ytcC; glucosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004774299.1	PFAM: Domain of unknown function (DUF1972); Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR015393:IPR001296; KEGG: geb:GM18_2243 hypothetical protein; PFAM: Protein of unknown function DUF1972; Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004774300.1	PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: cat:CA2559_02960 glycosyltransferase; PFAM: Bacterial sugar transferase; SPTR: Glycosyltransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_004774301.1	PFAM: Universal stress protein family; InterPro IPR006016; KEGG: mtt:Ftrac_2644 UspA domain-containing protein; PFAM: UspA; SPTR:  universal stress protein
YP_004774302.1	PFAM: 2',5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051; KEGG: mtt:Ftrac_2577 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX; SPTR:  2',5' RNA ligase
YP_004774303.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent/ligand-gated channel
YP_004774304.1	PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004774305.1	KEGG: phe:Phep_3467 hypothetical protein; SPTR:  uncharacterized protein
YP_004774306.1	KEGG: mtt:Ftrac_1744 hypothetical protein; SPTR: Membrane protein
YP_004774307.1	PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; KEGG: cpi:Cpin_1880 aminopeptidase; SPTR:  aminopeptidase
YP_004774308.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter
YP_004774309.1	PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: sgy:Sgly_1830 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II
YP_004774310.1	PFAM: Nucleotidyl transferase; KEGG: lby:Lbys_1219 hypothetical protein; SPTR: Nucleotidyltransferase
YP_004774311.1	PFAM: DoxX; InterPro IPR011637; KEGG: dfe:Dfer_3051 DoxX family protein; PFAM: DoxX; SPTR:  uncharacterized protein
YP_004774312.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA replication and repair protein recF; InterPro IPR003395:IPR001238; KEGG: mtt:Ftrac_2511 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF
YP_004774313.1	PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit; COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017:IPR017597; KEGG: lby:Lbys_2059 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase, E1 component; SPTR: Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit; TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
YP_004774314.1	KEGG: pap:PSPA7_3748 hypothetical protein; SPTR:  uncharacterized protein
YP_004774315.1	KEGG: shg:Sph21_3400 hypothetical protein; SPTR:  uncharacterized protein
YP_004774317.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: phe:Phep_1932 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004774318.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_4790 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR
YP_004774319.1	KEGG: shg:Sph21_3401 hypothetical protein; SPTR:  uncharacterized protein
YP_004774320.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: sli:Slin_4376 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; UbiC transcription regulator-associated; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family
YP_004774321.1	PFAM: Major Facilitator Superfamily; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: sli:Slin_4383 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1
YP_004774322.1	PFAM: L-arabinose isomerase; L-fucose isomerase, C-terminal domain; COGs: COG2160 L-arabinose isomerase; InterPro IPR015888; KEGG: sli:Slin_4382 L-fucose isomerase-like protein; PFAM: L-fucose isomerase-like, C-terminal; SPTR: L-fucose isomerase-like protein
YP_004774323.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: phe:Phep_2825 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004774324.1	PFAM: Glycosyl hydrolases family 2, sugar binding domain; InterPro IPR006104; KEGG: phe:Phep_3492 family 2 glycoside hydrolase; PFAM: Glycoside hydrolase 2, carbohydrate-binding; SPTR: Glycoside hydrolase 2 sugar binding
YP_004774325.1	PFAM: Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: gym:GYMC10_1006 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase
YP_004774326.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: cao:Celal_1830 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; TIGRFAM: Ribonuclease BN
YP_004774327.1	KEGG: cyh:Cyan8802_4372 hypothetical protein; SPTR:  uncharacterized protein
YP_004774328.1	PFAM: Phage integrase; InterPro IPR002104; KEGG: ppn:Palpr_1979 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase
YP_004774330.1	KEGG: ppn:Palpr_1961 hypothetical protein; SPTR: DNA binding domain protein, excisionase
YP_004774332.1	PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain; COGs: COG3378 ATPase; InterPro IPR014818:IPR006500; KEGG: sli:Slin_3095 P4 family phage/plasmid primase; PFAM: Phage/plasmid primase, P4, C-terminal; SPTR: Phage/plasmid primase, P4 family, C-terminal domain protein; TIGRFAM: DNA primase, phage/plasmid
YP_004774333.1	KEGG: sli:Slin_3094 hypothetical protein; SPTR:  uncharacterized protein
YP_004774334.1	KEGG: pkn:PKH_143120 hypothetical protein; SPTR:  uncharacterized protein
YP_004774337.1	KEGG: ran:Riean_1236 hypothetical protein; SPTR:  uncharacterized protein
YP_004774338.1	PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR005662:IPR002917:IPR004044:IPR005225; KEGG: cat:CA2559_01555  GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein
YP_004774339.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR016484:IPR002917:IPR005225; KEGG: mtt:Ftrac_1697 ribosome-associated GTPase EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein
YP_004774340.1	KEGG: gfo:GFO_1893 secreted protein
YP_004774341.1	PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: fba:FIC_01344 ribosomal RNA small subunit methyltransferase G; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G
YP_004774342.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: mtt:Ftrac_0310 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor SigW; TIGRFAM: RNA polymerase sigma-70
YP_004774343.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: sli:Slin_4080 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: B-glycosyltransferase-related protein, glycosyltransferase 2 protein
YP_004774344.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: psn:Pedsa_1842 tRNA-guanine transglycosylase; PFAM: Queuine/other tRNA-ribosyltransferase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase
YP_004774345.1	PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: mtt:Ftrac_0313 permease yjgp/yjgq family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Membrane protein
YP_004774346.1	PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: mtt:Ftrac_0314 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Membrane protein
YP_004774347.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR004424:IPR006204:IPR013750; KEGG: cpi:Cpin_3757 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_004774348.1	PFAM: Dehydratase; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR004404:IPR000581; KEGG: dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase
YP_004774349.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: rbi:RB2501_14419  acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: Acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic
YP_004774350.1	PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: wvi:Weevi_0073 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit
YP_004774351.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013116:IPR000506:IPR013023; KEGG: dfe:Dfer_3679 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase
YP_004774352.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005671; KEGG: bvu:BVU_2004 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase; TIGRFAM: Bacterial 2-isopropylmalate synthase
YP_004774353.1	PFAM: Protein of unknown function (DUF521); Aconitase (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit region; InterPro IPR004430:IPR001030; KEGG: 3-isopropylmalate dehydratase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit region
YP_004774354.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; COGs: COG0066 3-isopropylmalate dehydratase small subunit; HAMAP: 3-isopropylmalate dehydratase, small subunit region; InterPro IPR004431:IPR000573; KEGG: psn:Pedsa_2357 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit region
YP_004774355.1	PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709; KEGG: fjo:Fjoh_1305 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase
YP_004774356.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429:IPR001804; KEGG: cly:Celly_2756 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase
YP_004774357.1	COGs: COG0623 Enoyl-(acyl-carrier-protein); KEGG: mtt:Ftrac_0317 enoyl-(acyl-carrier-protein) reductase (NADH); SPTR:  enoyl-(Acyl-carrier-protein) reductase
YP_004774358.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR004604; KEGG: chu:CHU_3012 DNA repair protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN
YP_004774359.1	KEGG: mtt:Ftrac_0973 hypothetical protein; SPTR:  uncharacterized protein
YP_004774360.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: sli:Slin_1305 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; SPTR: Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
YP_004774361.1	KEGG: sli:Slin_1306 hypothetical protein; SPTR:  DNA-directed RNA polymerase, omega subunit
YP_004774362.1	TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: mtt:Ftrac_0970 outer membrane assembly lipoprotein yfio; SPTR:  TPR repeat protein; TIGRFAM: Outer membrane assembly lipoprotein YfiO
YP_004774363.1	KEGG: mtt:Ftrac_0969 hypothetical protein; SPTR:  uncharacterized protein
YP_004774364.1	InterPro IPR010664; KEGG: mtt:Ftrac_0968 hypothetical protein; PFAM: Protein of unknown function DUF1239; SPTR:  uncharacterized protein
YP_004774365.1	PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: tRNA(Ile)-lysidine synthase; InterPro IPR011063:IPR012795:IPR012796; KEGG: chu:CHU_3018 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal
YP_004774366.1	PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: mtt:Ftrac_0966 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR:  cyclic nucleotide-binding domain protein
YP_004774367.1	PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR011275:IPR001236; KEGG: chu:CHU_3020 malate dehydrogenase (NAD); PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent
YP_004774368.1	KEGG: mtt:Ftrac_3760 hypothetical protein; SPTR:  uncharacterized protein
YP_004774369.1	PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mtt:Ftrac_3759 mscs mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein
YP_004774370.1	PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: gfo:GFO_3019 short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase
YP_004774371.1	PFAM: HlyD family secretion protein; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cao:Celal_3045 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit
YP_004774372.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_14528 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Lipoprotein releasing system transmembrane protein LolC
YP_004774373.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system, ATP-binding protein
YP_004774374.1	KEGG: bfr:BF4409 hypothetical protein; SPTR:  exported protein
YP_004774376.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: mtt:Ftrac_3761 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Glucitol operon repressor
YP_004774377.1	PFAM: FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: mtt:Ftrac_3762 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Glycerol-3-phosphate dehydrogenase
YP_004774378.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR018484:IPR018485:IPR005999; KEGG: mtt:Ftrac_3763 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase
YP_004774379.1	PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: mtt:Ftrac_3764 major intrinsic protein; PFAM: Major intrinsic protein; SPTR: Major intrinsic protein
YP_004774380.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR011923; KEGG: mtt:Ftrac_2252 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA
YP_004774381.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR017790; KEGG: aas:Aasi_0246 hypothetical protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; SPTR: Penicillin-binding protein 2; TIGRFAM: Penicillin-binding protein 2
YP_004774382.1	TIGRFAM: rod shape-determining protein MreD; InterPro IPR007227; KEGG: mtt:Ftrac_2254 hypothetical protein; SPTR:  rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD
YP_004774383.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221:IPR005223; KEGG: mtt:Ftrac_2255 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype
YP_004774384.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: mtt:Ftrac_2256 cell shape determining protein, MreB/mrl family; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl
YP_004774385.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR013982:IPR011607:IPR002695; KEGG: mtt:Ftrac_2257 phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; SMART: AICARFT/IMPCHase bienzyme, formylation region; SPTR: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: AICARFT/IMPCHase bienzyme
YP_004774386.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376:IPR004607; KEGG: bth:BT_3360 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase
YP_004774387.1	KEGG: dfe:Dfer_1397 glycosyl hydrolase 32 domain protein; SPTR: Glycosyl hydrolase 32 domain protein
YP_004774388.1	PFAM: UbiA prenyltransferase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: mtt:Ftrac_2481 geranylgeranylglycerol-phosphate geranylgeranyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate-octaprenyltransferase
YP_004774389.1	PFAM: Domain of unknown function (DUF2520); Rossmann-like domain; COGs: COG5495 conserved hypothetical protein; InterPro IPR004455:IPR018931; KEGG: mtt:Ftrac_2482 hypothetical protein; PFAM: Domain of unknown function DUF2520; NADP oxidoreductase, coenzyme F420-dependent; SPTR:  uncharacterized protein
YP_004774390.1	PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: mtt:Ftrac_2483 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein
YP_004774391.1	PFAM: CcmE; KEGG: mtt:Ftrac_2484 hypothetical protein; SPTR:  uncharacterized protein
YP_004774392.1	KEGG: mtt:Ftrac_2485 hypothetical protein; SPTR:  uncharacterized protein
YP_004774393.1	PFAM: Cytochrome C assembly protein; InterPro IPR002541; KEGG: mtt:Ftrac_2486 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR:  heme exporter protein C
YP_004774394.1	PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB; COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: sli:Slin_1448 cytochrome c biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: Heme exporter protein B
YP_004774395.1	PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: dfe:Dfer_3986 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase
YP_004774396.1	PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: mtt:Ftrac_2789 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; SPTR: Serine--tRNA ligase; TIGRFAM: Seryl-tRNA synthetase, class IIa
YP_004774397.1	PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: sus:Acid_6225 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR:  uncharacterized protein
YP_004774398.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_0415 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase
YP_004774399.1	PFAM: Fumarylacetoacetate (FAA) hydrolase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: zpr:ZPR_4369 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: Fumarylacetoacetate hydrolase
YP_004774400.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: phe:Phep_3580 GntR domain-containing protein; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: GntR domain protein
YP_004774401.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: phe:Phep_3579 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor
YP_004774402.1	PFAM: SusD family; InterPro IPR012944; KEGG: phe:Phep_3578 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004774403.1	PFAM: BNR/Asp-box repeat; KEGG: phe:Phep_3583 BNR repeat-containing glycosyl hydrolase; SPTR: BNR repeat-containing glycosyl hydrolase
YP_004774404.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: cpe:CPE2321 hypothetical protein; PFAM: Lipase, GDSL; SPTR:  uncharacterized protein
YP_004774405.1	PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: phe:Phep_3577 glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR repeat; SPTR: Glycosyl hydrolase BNR repeat-containing protein
YP_004774406.1	PFAM: BNR/Asp-box repeat; KEGG: phe:Phep_3577 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein
YP_004774407.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0172 N-sulfoglucosamine sulfohydrolase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004774408.1	PFAM: BNR/Asp-box repeat; KEGG: phe:Phep_3577 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein
YP_004774409.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: phe:Phep_3582 G-D-S-L family lipolytic protein; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family
YP_004774410.1	PFAM: Uncharacterized protein conserved in archaea (DUF2119); Succinylglutamate desuccinylase / Aspartoacylase; COGs: COG3608 deacylase; InterPro IPR007036; KEGG: phe:Phep_3576 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase
YP_004774411.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: phe:Phep_3575 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004774412.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926; KEGG: phe:Phep_3574 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Threonine synthase; manually curated
YP_004774413.1	PFAM: Dihydrodipicolinate synthetase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: phe:Phep_3573 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase
YP_004774414.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: phe:Phep_3572 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP
YP_004774415.1	PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: phe:Phep_3571 microcystin LR degradation protein MlrC; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: Microcystin LR degradation protein MlrC
YP_004774416.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: phe:Phep_3570 SMP-30/gluconolaconase/LRE domain-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: SMP-30/Gluconolaconase/LRE domain protein
YP_004774417.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: bcs:BCAN_B0406 4,5,-dihydroxyphthalate dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase
YP_004774418.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR006652:IPR001734; KEGG: fbc:FB2170_03920 hypothetical protein; PFAM: Sodium/solute symporter; Kelch repeat type 1; SPTR:  uncharacterized protein; TIGRFAM: Sodium/solute symporter, subgroup
YP_004774419.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR011782:IPR001254; KEGG: mtt:Ftrac_2444 protease do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: S1C (Protease Do) subfamily peptidase MucD; TIGRFAM: Peptidase S1C, Do
YP_004774420.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  uncharacterized protein
YP_004774421.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  uncharacterized protein
YP_004774422.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  uncharacterized protein
YP_004774423.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  uncharacterized protein
YP_004774424.1	PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: mtt:Ftrac_1589 hypothetical protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR:  uncharacterized protein
YP_004774425.1	PFAM: GIY-YIG catalytic domain; KEGG: mtt:Ftrac_1589 hypothetical protein; SPTR:  uncharacterized protein
YP_004774427.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004774428.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cao:Celal_4197 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004774429.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2231 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004774430.1	PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_3918 hypothetical protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004774431.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_4498 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004774432.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01931  sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004774433.1	KEGG: psn:Pedsa_3753 GPI anchored protein; SPTR:  uncharacterized protein
YP_004774434.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: phe:Phep_2526 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  TonB-dependent receptor
YP_004774435.1	COGs: COG0308 Aminopeptidase N; KEGG: mtt:Ftrac_0558 peptidase; SPTR:  aminopeptidase
YP_004774436.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mtt:Ftrac_2750 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase
YP_004774437.1	PFAM: Peptidase S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: mtt:Ftrac_0006 C-terminal processing peptidase-3; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl protease; TIGRFAM: Peptidase S41A, C-terminal protease
YP_004774438.1	PFAM: Domain of Unknown function (DUF542); COGs: COG2846 Regulator of cell morphogenesis and NO signaling; InterPro IPR012312; KEGG: mtt:Ftrac_0007 hypothetical protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR:  uncharacterized protein
YP_004774439.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); HAMAP: Holliday junction resolvase; InterPro IPR006641:IPR005227; KEGG: dfe:Dfer_4051 Holliday junction resolvase YqgF; PFAM: Resolvase, holliday junction-type, YqgF-like; SMART: Resolvase, RNase H-like fold; SPTR:  Holliday junction resolvase; TIGRFAM: Resolvase, holliday junction-type, YqgF-like
YP_004774440.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: mtt:Ftrac_0009 peptide deformylase; PFAM: Formylmethionine deformylase; SPTR: Peptide deformylase 2; TIGRFAM: Formylmethionine deformylase
YP_004774441.1	PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: mtt:Ftrac_1583 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004774442.1	KEGG: mtt:Ftrac_1585 fg-gap repeat protein; SPTR:  uncharacterized protein
YP_004774443.1	PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR005863:IPR000713:IPR013221:IPR004101; KEGG: dfe:Dfer_4530 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
YP_004774444.1	PFAM: DinB family; KEGG: bmd:BMD_3747 hypothetical protein; SPTR:  uncharacterized protein
YP_004774445.1	PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: sde:Sde_0182 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: Cellulose-binding protein
YP_004774446.1	PFAM: MerC mercury resistance protein; KEGG: cly:Celly_2226 hypothetical protein; SPTR:  uncharacterized protein
YP_004774447.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: cly:Celly_2227 GTP cyclohydrolase 1; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I
YP_004774448.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2147); InterPro IPR019223; PFAM: Protein of unknown function DUF2147
YP_004774449.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: gfo:GFO_0051 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004774450.1	COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: sli:Slin_1840 efflux transporter RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004774451.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Efflux ABC transporter, permease
YP_004774452.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: lby:Lbys_1426 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system ATP-binding protein LolD 1
YP_004774453.1	KEGG: lby:Lbys_2616 hypothetical protein; SPTR:  uncharacterized protein
YP_004774454.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: shg:Sph21_0874 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS
YP_004774455.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: shg:Sph21_0873 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR:  two-component response regulator autolysis regulator LytR
YP_004774456.1	KEGG: ppn:Palpr_0452 hypothetical protein; SPTR:  uncharacterized protein
YP_004774458.1	KEGG: cpi:Cpin_5854 hypothetical protein; SPTR:  uncharacterized protein
YP_004774460.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: sli:Slin_3727 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Inner membrane protein YehU
YP_004774461.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: sli:Slin_3726 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator
YP_004774462.1	PFAM: Demethylmenaquinone methyltransferase; COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: pol:Bpro_2296 hypothetical protein; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; SPTR: Dimethylmenaquinone methyltransferase
YP_004774464.1	PFAM: Aconitate B N-terminal domain; Aconitase (aconitate hydratase); Aconitate hydratase 2 N-terminus; COGs: COG1049 Aconitase B; InterPro IPR015929:IPR001030; KEGG: cao:Celal_2440 aconitase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
YP_004774465.1	PFAM:  esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: ppn:Palpr_0042 esterase; PFAM:  esterase; SPTR: Esterase
YP_004774466.1	KEGG: heparinase II/III family protein; SPTR:  uncharacterized protein
YP_004774467.1	PFAM: Protein of unknown function (DUF3500); KEGG: apt:APA01_15210 hypothetical protein; SPTR:  uncharacterized protein
YP_004774468.1	KEGG: bwe:BcerKBAB4_1139 hypothetical protein; SPTR:  uncharacterized protein
YP_004774469.1	PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_0450 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase enzyme
YP_004774470.1	PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sli:Slin_4718 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase
YP_004774471.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_1253 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein
YP_004774472.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: mtt:Ftrac_1733 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase
YP_004774473.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR006255:IPR000089:IPR004167:IPR001078; KEGG: mtt:Ftrac_1732 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: Dihydrolipoyllysine-residue succinyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase
YP_004774474.1	PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603:IPR001017:IPR005475; KEGG: chu:CHU_3362 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SPTR: Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component
YP_004774476.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: cts:Ctha_1962 NAD-dependent epimerase/dehydratase; SPTR:  uncharacterized protein
YP_004774477.1	PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: chu:CHU_0011 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase
YP_004774478.1	PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mtt:Ftrac_3311 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family
YP_004774479.1	PFAM: Glycosyl hydrolase 3 N terminal domain; Beta-lactamase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: mtt:Ftrac_3312 glycoside hydrolase 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; SPTR: Glycosyl hydrolase, family 3
YP_004774480.1	KEGG: mtt:Ftrac_3313 hypothetical protein; SPTR:  uncharacterized protein
YP_004774481.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein mutL; InterPro IPR014763:IPR003594:IPR013507:IPR014790; KEGG: mtt:Ftrac_3314 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal
YP_004774482.1	PFAM: Rhomboid family; InterPro IPR002610; KEGG: mtt:Ftrac_3315 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein
YP_004774483.1	PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: mtt:Ftrac_3316 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein
YP_004774484.1	KEGG: regulatory protein TetR; SPTR: Regulatory protein TetR
YP_004774485.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383:IPR007197; KEGG: gfo:GFO_0353 radical SAM superfamily protein, UPF0063; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN
YP_004774486.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2663 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase A
YP_004774487.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR017730:IPR004176:IPR003959:IPR 013093:IPR019489; KEGG: mtt:Ftrac_3150 ATP-dependent chaperone ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent chaperone protein ClpB; TIGRFAM: Chaperonin ClpB
YP_004774488.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2404 sulfatase; PFAM: Sulfatase; SPTR: Arylsulphatase A
YP_004774489.1	PFAM: SnoaL-like polyketide cyclase; KEGG: cly:Celly_0643 hypothetical protein; SPTR:  uncharacterized protein
YP_004774490.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; COGs: COG0474 Cation transport ATPase; InterProIPR006408:IPR001757:IPR004014:IPR008250:IPR 005834:IPR006068; KEGG: P-type HAD superfamily ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; SPTR: Probable calcium-transporting ATPase; TIGRFAM: ATPase, P-type, calcium-transporting, PMCA-type; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004774491.1	PFAM: Domain of unknown function (DUF1083); KEGG: vvy:VV0542 endoxylanase precursor; SPTR:  uncharacterized protein
YP_004774492.1	PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance; KEGG: fjo:Fjoh_4206 hypothetical protein; SPTR: Hypothetical lipoprotein
YP_004774493.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mtt:Ftrac_2956 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR:  UDP-glucose 4-epimerase
YP_004774494.1	PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR011282:IPR004839; KEGG: mtt:Ftrac_3705 2-amino-3-ketobutyrate coenzyme a ligase; PFAM: Aminotransferase, class I/II; SPTR: Glycine C-acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase
YP_004774495.1	PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: mtt:Ftrac_3720 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159
YP_004774496.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489; KEGG: zpr:ZPR_0979 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase
YP_004774497.1	PFAM: Domain of Unknown Function (DUF1599); InterPro IPR011630; KEGG: mtt:Ftrac_3718 hypothetical protein; PFAM: Protein of unknown function DUF1599; SPTR:  uncharacterized protein
YP_004774498.1	PFAM: DoxX; InterPro IPR011637; KEGG: mtt:Ftrac_3717 DoxX family protein; PFAM: DoxX; SPTR: Membrane protein
YP_004774499.1	PFAM: Shikimate kinase; COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: sli:Slin_2313 shikimate kinase; PFAM: Shikimate kinase; SPTR: Shikimate kinase
YP_004774500.1	PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); InterPro IPR005017; KEGG: psn:Pedsa_0414 membrane protein involved in aromatic hydrocarbon degradation; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR:  uncharacterized protein
YP_004774501.1	KEGG: sli:Slin_2311 hypothetical protein; SPTR:  uncharacterized protein
YP_004774502.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I; COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, prokaryotic-type; InterPro IPR004499:IPR002314:IPR004154:IPR016061; KEGG: dfe:Dfer_0217 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II, C-terminal; Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, prokaryotic-type
YP_004774503.1	PFAM: NfeD-like; InterPro IPR002810; KEGG: mtt:Ftrac_3712 hypothetical protein; PFAM: Nodulation efficiency, NfeD; SPTR: Nodulation efficiency protein D (NfeD)
YP_004774504.1	PFAM: SigmaW regulon antibacterial; COGs: COG4864 conserved hypothetical protein; HAMAP: UPF0365 protein; KEGG: mtt:Ftrac_3711 hypothetical protein; SPTR: UPF0365 protein ALPR1_16009
YP_004774505.1	InterPro IPR011647; KEGG: amr:AM1_0592 lipoprotein; PFAM: KWG Leptospira; SPTR:  uncharacterized protein
YP_004774506.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343:IPR015895:IPR006151:IPR015896; KEGG: mtt:Ftrac_2957 glutamyl-tRNA reductase; PFAM: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase
YP_004774507.1	KEGG: aas:Aasi_0664 hypothetical protein; SPTR: ComEA protein-related protein
YP_004774508.1	KEGG: fjo:Fjoh_2919 hypothetical protein; SPTR: Type I restriction enzyme R protein
YP_004774509.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: mtt:Ftrac_2840 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding; SPTR: Transcriptional regulator
YP_004774510.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_11601 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004774511.1	KEGG: cao:Celal_3094 tat (twin-arginine translocation) pathway signal sequence domain protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein
YP_004774512.1	PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR002938; KEGG: zpr:ZPR_3190 oxidoreductase, GMC family protein; PFAM: Monooxygenase, FAD-binding; SPTR: GMC oxidoreductase
YP_004774513.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; SPTR: Arylesterase
YP_004774514.1	PFAM: ABC transporter; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2284 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004774515.1	PFAM: Predicted permease; COGs: COG3127 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component; InterPro IPR003838; KEGG: sli:Slin_6498 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  permease domain protein
YP_004774516.1	PFAM: MarR family; InterPro IPR000835; KEGG: mtt:Ftrac_0208 regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator
YP_004774517.1	PFAM: Protein of unknown function (DUF541); COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR:  uncharacterized protein
YP_004774518.1	KEGG: fbc:FB2170_04025 hypothetical protein; SPTR:  uncharacterized protein
YP_004774519.1	PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: cpi:Cpin_0539 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453
YP_004774520.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150:IPR006379:IPR013200; KEGG: mtt:Ftrac_1660 cof-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Cof protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB
YP_004774521.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638:IPR004558:IPR007197:IPR010723; KEGG: wvi:Weevi_1359 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN
YP_004774522.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR008141:IPR007886:IPR007698; KEGG: mtt:Ftrac_3618 L-alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; SPTR: Alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase
YP_004774523.1	PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: mtt:Ftrac_3619 transketolase domain-containing protein; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SPTR: Transketolase
YP_004774524.1	KEGG: mtt:Ftrac_0976 hypothetical protein; SPTR:  uncharacterized protein
YP_004774525.1	PFAM: Acyl-protein synthetase, LuxE; KEGG: mtt:Ftrac_0975 acyl-protein synthetase, LuxE; SPTR:  uncharacterized protein
YP_004774527.1	PFAM: Response regulator receiver domain; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078; KEGG: mtt:Ftrac_0050 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Sigma-54 dependent DNA-binding response regulator CrdA
YP_004774528.1	PFAM: Protein of unknown function (DUF3109); KEGG: mtt:Ftrac_0122 hypothetical protein; SPTR:  uncharacterized protein
YP_004774529.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: mtt:Ftrac_0570 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_004774530.1	KEGG: mtt:Ftrac_0569 hypothetical protein; SPTR:  uncharacterized protein
YP_004774531.1	PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: mtt:Ftrac_0837 UvrD/rep helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase PcrA
YP_004774532.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: ran:Riean_0349 lipid a biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lauroyl/myristoyl acyltransferase
YP_004774533.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_5546 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor RpoE1; TIGRFAM: RNA polymerase sigma-70
YP_004774534.1	TIGRFAM: mycothiol system anti-sigma-R factor; anti-sigma factor, TIGR02949 family; KEGG: sli:Slin_5547 hypothetical protein; SPTR:  anti-sigma factor
YP_004774535.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR017665:IPR008145:IPR008144; KEGG: sli:Slin_5548 guanylate kinase; PFAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group
YP_004774536.1	PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: nicotinate-nucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820; KEGG: mtt:Ftrac_1821 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: Cytidylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related
YP_004774537.1	KEGG: fbc:FB2170_08129 phosphoesterase, PA-phosphatase related protein; SPTR:  phosphoesterase, PA-phosphatase related protein
YP_004774538.1	PFAM: PAP2 superfamily; KEGG: dfe:Dfer_4739 vanadium-dependent haloperoxidase; SPTR: Vanadium-dependent haloperoxidase
YP_004774539.1	PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR011519:IPR013517; KEGG: dfe:Dfer_4738 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC/UnbV domain protein
YP_004774540.1	PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004774541.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein
YP_004774542.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR015998:IPR002661; KEGG: mtt:Ftrac_3015 ribosome recycling factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor
YP_004774543.1	PFAM: Amino acid kinase; TIGRFAM: uridylate kinase; COGs: COG0528 Uridylate kinase; InterPro IPR015963:IPR001048; KEGG: mtt:Ftrac_3016 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: UMP kinase; TIGRFAM: Uridylate kinase, bacteria
YP_004774544.1	PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: dfe:Dfer_4878 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Membrane alanine aminopeptidase
YP_004774545.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: mtt:Ftrac_3018 translation elongation factor 1a (ef-1a/ef-tu); PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein
YP_004774546.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; InterPro IPR005807:IPR001901; KEGG: aas:Aasi_1402 hypothetical protein; PFAM: Protein secE/sec61-gamma protein; SPTR: Preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex
YP_004774547.1	PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR005824:IPR001062; KEGG: mtt:Ftrac_3020 transcription antitermination protein NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG
YP_004774548.1	PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; COGs: COG0080 Ribosomal protein L11; InterPro IPR000911:IPR006519:IPR020784:IPR020783; KEGG: dfe:Dfer_3453 50S ribosomal protein L11; PFAM: Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type
YP_004774549.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: mtt:Ftrac_3022 LSU ribosomal protein l1p; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type
YP_004774550.1	PFAM: Ribosomal protein L10; COGs: COG0244 Ribosomal protein L10; HAMAP: 50S ribosomal protein L10; InterPro IPR001790; KEGG: dfe:Dfer_3451 ribosomal protein L10; PFAM: Ribosomal protein L10; SPTR: 50S ribosomal protein L10
YP_004774551.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: fbc:FB2170_16186  50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12
YP_004774552.1	PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: mtt:Ftrac_3025 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type
YP_004774553.1	PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta'; InterProIPR006592:IPR012754:IPR007080:IPR000722:IPR 007066:IPR007083:IPR007081; KEGG: chu:CHU_3168 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime
YP_004774554.1	PFAM: Protein of unknown function (DUF3467); KEGG: mtt:Ftrac_3027 hypothetical protein; SPTR:  uncharacterized protein
YP_004774555.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; COGs: COG0048 Ribosomal protein S12; InterPro IPR005679:IPR006032; KEGG: lby:Lbys_1936 ssu ribosomal protein s12p; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type
YP_004774556.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; COGs: COG0049 Ribosomal protein S7; InterPro IPR005717:IPR000235; KEGG: mtt:Ftrac_3029 SSU ribosomal protein s7p; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type
YP_004774557.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640; KEGG: aas:Aasi_0125 elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein
YP_004774558.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; COGs: COG0051 Ribosomal protein S10; HAMAP: 30S ribosomal protein S10; InterPro IPR005731:IPR001848; KEGG: mtt:Ftrac_3031 SSU ribosomal protein s10p; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10, bacterial
YP_004774559.1	PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; COGs: COG0087 Ribosomal protein L3; InterPro IPR019927:IPR000597; KEGG: sli:Slin_5787 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type
YP_004774560.1	PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: psn:Pedsa_2147 LSU ribosomal protein L4P; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4
YP_004774561.1	PFAM: Ribosomal protein L23; COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: chu:CHU_3160 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23
YP_004774562.1	PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; COGs: COG0090 Ribosomal protein L2; InterPro IPR005880:IPR002171; KEGG: lby:Lbys_1827 lsu ribosomal protein l2p; PFAM: Ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type
YP_004774563.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: mtt:Ftrac_3036 SSU ribosomal protein s19p; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type
YP_004774564.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR001063; KEGG: mtt:Ftrac_3037 LSU ribosomal protein l22p; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type
YP_004774565.1	PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; COGs: COG0092 Ribosomal protein S3; InterProIPR004087:IPR005704:IPR008282:IPR004044:IPR 001351; KEGG: chu:CHU_3156 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial
YP_004774566.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114:IPR016180; KEGG: mtt:Ftrac_3039 LSU ribosomal protein l16p; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16
YP_004774567.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR001854; KEGG: chu:CHU_3154 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: Ribosomal protein L29
YP_004774568.1	PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; COGs: COG0186 Ribosomal protein S17; InterPro IPR019984:IPR000266; KEGG: mtt:Ftrac_3041 SSU ribosomal protein s17p; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type
YP_004774569.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR000218; KEGG: dfe:Dfer_4353 ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type
YP_004774570.1	PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; COGs: COG0198 Ribosomal protein L24; InterPro IPR005824:IPR003256; KEGG: chu:CHU_3151 50S ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24
YP_004774571.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: mtt:Ftrac_3044 LSU ribosomal protein l5p; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5
YP_004774572.1	PFAM: Ribosomal protein S14p/S29e; COGs: COG0199 Ribosomal protein S14; HAMAP: 30S ribosomal protein S14; InterPro IPR001209; KEGG: mtt:Ftrac_3045 SSU ribosomal protein s14p; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14
YP_004774573.1	PFAM: Ribosomal protein S8; COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: lby:Lbys_1816 ssu ribosomal protein s8p; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8
YP_004774574.1	PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906:IPR020040; KEGG: dfe:Dfer_4358 ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type
YP_004774575.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: chu:CHU_3146 50S ribosomal protein L18P; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial
YP_004774576.1	PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; COGs: COG0098 Ribosomal protein S5; InterPro IPR005712:IPR013810:IPR005324; KEGG: mtt:Ftrac_3049 SSU ribosomal protein s5p; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type
YP_004774577.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR005996:IPR000517; KEGG: dfe:Dfer_4361 ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e, conserved region; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type
YP_004774578.1	PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; COGs: COG0200 Ribosomal protein L15; InterPro IPR005749:IPR001196; KEGG: mtt:Ftrac_3051 LSU ribosomal protein l15p; PFAM: Ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type
YP_004774579.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: mtt:Ftrac_3052 protein translocase subunit SecY/sec61 alpha; PFAM: SecY protein; SPTR: Preprotein translocase, SecY subunit; TIGRFAM: SecY protein
YP_004774580.1	PFAM: Metallopeptidase M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467:IPR000994; KEGG: chu:CHU_3141 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1
YP_004774581.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR004368:IPR006196; KEGG: mtt:Ftrac_3053 bacterial translation initiation factor 1 (bif-1); PFAM: S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1
YP_004774582.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: phe:Phep_0625 50S ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; manually curated
YP_004774583.1	PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; COGs: COG0099 Ribosomal protein S13; InterPro IPR019980:IPR001892; KEGG: lby:Lbys_1806 ssu ribosomal protein s13p; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type
YP_004774584.1	PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; COGs: COG0100 Ribosomal protein S11; InterPro IPR019981:IPR001971; KEGG: mtt:Ftrac_3056 SSU ribosomal protein s11p; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type
YP_004774585.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942:IPR005709:IPR001912; KEGG: mtt:Ftrac_3057 SSU ribosomal protein s4p; PFAM: Ribosomal protein S4; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type
YP_004774586.1	PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773:IPR011263:IPR011261:IPR011262:IPR 011260; KEGG: mtt:Ftrac_3058 DNA-directed RNA polymerase subunit alpha; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit
YP_004774587.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG0203 Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; InterPro IPR000456; KEGG: mtt:Ftrac_3059 LSU ribosomal protein l17p; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17
YP_004774588.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: chu:CHU_3134 carbamoyl phosphate synthase small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl phosphate synthase, small subunit, N-terminal; SPTR: Carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit
YP_004774589.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: lby:Lbys_0613 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; SPTR: Enolase; TIGRFAM: Enolase
YP_004774590.1	PFAM: Septum formation initiator; KEGG: mtt:Ftrac_3062 hypothetical protein; SPTR:  septum formation initiator-related protein
YP_004774591.1	KEGG: mtt:Ftrac_3063 hypothetical protein; SPTR:  uncharacterized protein
YP_004774592.1	TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: lby:Lbys_0477 serine O-acetyltransferase; SPTR: Serine O-acetyltransferase
YP_004774593.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; COGs: COG0031 Cysteine synthase; InterPro IPR005858:IPR005856:IPR001926; KEGG: mtt:Ftrac_0041 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; Cysteine synthase B
YP_004774595.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: sli:Slin_6603 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Ser/Thr protein phosphatase
YP_004774596.1	InterPro IPR006311:IPR012307; KEGG: fbc:FB2170_03970 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR:  Tat (Twin-arginine translocation) pathway signal sequence containing protein
YP_004774597.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mtt:Ftrac_3075 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
YP_004774598.1	PFAM: HTH domain; COGs: COG2378 transcriptional regulator protein; InterPro IPR013196; KEGG: fjo:Fjoh_0788 helix-turn-helix, type 11 domain-containing protein; SPTR:  transcriptional regulator
YP_004774599.1	PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: fjo:Fjoh_0790 DinB family protein; PFAM: DinB; SPTR: DinB family protein
YP_004774600.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase; InterPro IPR002313:IPR004365:IPR004364; KEGG: phe:Phep_1559 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II
YP_004774601.1	PFAM: Proline dehydrogenase; InterPro IPR002872; KEGG: mtt:Ftrac_1256 proline dehydrogenase; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase
YP_004774602.1	PFAM: Inosine-uridine preferring nucleoside hydrolase; KEGG: dfe:Dfer_1840 inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine/uridine-preferring nucleoside hydrolase
YP_004774603.1	SPTR:  uncharacterized protein
YP_004774604.1	PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR020822; KEGG: mtt:Ftrac_1264 3-deoxy-7-phosphoheptulonate synthase; PFAM: Chorismate mutase, type II; DAHP synthetase I/KDSA; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase
YP_004774605.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase; InterPro IPR002658; KEGG: dfe:Dfer_3640 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; SPTR: 3-dehydroquinate synthase
YP_004774606.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; InterPro IPR006264:IPR001986; KEGG: sli:Slin_2931 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_004774607.1	PFAM: Prephenate dehydratase; ACT domain; COGs: COG0077 Prephenate dehydratase; InterPro IPR001086:IPR002912; KEGG: Prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT; SPTR: Prephenate dehydratase
YP_004774608.1	PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fjo:Fjoh_0516 aminotransferase, class I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, classes I and II
YP_004774609.1	PFAM: Prephenate dehydrogenase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: zpr:ZPR_3525 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase
YP_004774610.1	PFAM: Amidinotransferase; COGs: COG2235 Arginine deiminase; InterPro IPR003198; KEGG: ttm:Tthe_0085 arginine deiminase; PFAM: Amidinotransferase; SPTR: Arginine deiminase
YP_004774611.1	KEGG: mtt:Ftrac_0086 hypothetical protein; SPTR:  uncharacterized protein
YP_004774612.1	PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: mtt:Ftrac_0087 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase
YP_004774614.1	COGs: COG2912 conserved hypothetical protein; KEGG: mtt:Ftrac_0090 hypothetical protein; SPTR:  uncharacterized protein
YP_004774615.1	PFAM: AhpC/TSA family; KEGG: chu:CHU_0757 thiol-disulfide isomerase/thioredoxin; SPTR:  antioxidant, AhpC/TSA family
YP_004774616.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; COGs: COG2091 Phosphopantetheinyl transferase; KEGG: dfe:Dfer_2892 4'-phosphopantetheinyl transferase; SPTR: 4'-phosphopantetheinyl transferase
YP_004774617.1	PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680:IPR019781; KEGG: chu:CHU_0759 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD domain-containing protein
YP_004774618.1	PFAM: DivIVA protein; TIGRFAM: DivIVA domain; InterPro IPR019933:IPR007793; KEGG: mtt:Ftrac_0093 diviva domain; PFAM: DivIVA; SPTR: DivIVA domain; TIGRFAM: DivIVA domain
YP_004774619.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157:IPR006156; KEGG: dfe:Dfer_2889 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; SPTR: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase
YP_004774620.1	KEGG: shg:Sph21_0210 hypothetical protein; SPTR:  uncharacterized protein
YP_004774621.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092:IPR000361; KEGG: rmr:Rmar_1342 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: HesB/YadR/YfhF family protein; TIGRFAM: FeS cluster insertion
YP_004774622.1	KEGG: mtt:Ftrac_0993 hypothetical protein; SPTR:  uncharacterized protein
YP_004774623.1	PFAM: Protein of unknown function (DUF1232); InterPro IPR010652; KEGG: cpb:Cphamn1_2537 hypothetical protein; PFAM: Protein of unknown function DUF1232; SPTR:  uncharacterized protein
YP_004774624.1	KEGG: lic:LIC11344 hypothetical protein; SPTR: NAD dependent epimerase/dehydratase
YP_004774625.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: bfr:BF0097 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004774626.1	PFAM: ABC transporter; COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003593:IPR003439; KEGG: cpi:Cpin_0162 ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR:  molybdenum transport ATP-binding protein
YP_004774627.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: mtt:Ftrac_1026 MazG nucleotide pyrophosphohydrolase; PFAM: NTP pyrophosphohydrolase MazG,  catalytic core; SPTR: MazG nucleotide pyrophosphohydrolase
YP_004774628.1	PFAM: MOSC N-terminal beta barrel domain; MOSC domain; COGs: COG3217 Uncharacterized Fe-S protein; InterPro IPR005303:IPR005302; KEGG: dfe:Dfer_3013 MOSC domain containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; SPTR: MOSC domain protein
YP_004774629.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: mtt:Ftrac_1865 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein DnaK; TIGRFAM: Chaperone DnaK
YP_004774631.1	PFAM: Chaperonin 10 Kd subunit; InterPro IPR020818; KEGG: shg:Sph21_4573 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SPTR: Chaperonin GroS
YP_004774633.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR001610:IPR000014:IPR003594:IPR013655:IPR 013656; KEGG: lil:LA_1860 histidine kinase sensor protein; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold-4; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS
YP_004774635.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774636.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: shg:Sph21_3223 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter
YP_004774637.1	PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: sli:Slin_5386 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase
YP_004774638.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR006439:IPR005834; KEGG: lby:Lbys_1526 had-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Glycoprotease/hydrolase, beta-phosphoglucomutase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1
YP_004774639.1	PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR010164:IPR005814; KEGG: mtt:Ftrac_2019 ornithine aminotransferase; PFAM: Aminotransferase class-III; SPTR: Ornithine aminotransferase; TIGRFAM: Ornithine aminotransferase
YP_004774640.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: mtt:Ftrac_2018 LSU ribosomal protein l28p; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28
YP_004774641.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: phe:Phep_3522 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33
YP_004774642.1	KEGG: dfe:Dfer_3608 hypothetical protein; SPTR:  uncharacterized protein
YP_004774643.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; COGs: COG0552 Signal recognition particle GTPase; InterPro IPR003593:IPR004390:IPR013822:IPR000897; KEGG: mtt:Ftrac_2015 signal recognition particle-docking protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY
YP_004774644.1	PFAM: Bacterial alpha-L-rhamnosidase; Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917:IPR008902; KEGG: sulfatase; PFAM: Sulfatase; Bacterial alpha-L-rhamnosidase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase)
YP_004774645.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: zpr:ZPR_2290 CDF family cation efflux protein; PFAM: Cation efflux protein; SPTR: CDF family cation efflux protein; TIGRFAM: Cation efflux protein
YP_004774646.1	PFAM: Dienelactone hydrolase; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: sli:Slin_1487 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase
YP_004774647.1	PFAM: Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: sli:Slin_6133 peptidase M28; PFAM: Peptidase M28; SPTR: Peptidase, M28A family
YP_004774648.1	KEGG: lch:Lcho_2482 hypothetical protein; SPTR:  uncharacterized protein
YP_004774649.1	KEGG: lch:Lcho_2483 hypothetical protein; SPTR:  uncharacterized protein
YP_004774651.1	PFAM: YCII-related domain; InterPro IPR005545; KEGG: mtt:Ftrac_1111 YCII-related protein; PFAM: YCII-related; SPTR: YCII-related protein
YP_004774652.1	KEGG: phe:Phep_1054 hypothetical protein; SPTR:  uncharacterized protein
YP_004774653.1	PFAM: Trehalose utilisation; KEGG: caa:Caka_1507 hypothetical protein; SPTR:  uncharacterized protein
YP_004774654.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03385 choline sulfatase; PFAM: Sulfatase; SPTR: Choline sulfatase
YP_004774655.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: gfo:GFO_1698 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004774656.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014182:IPR013154:IPR013149; KEGG: chu:CHU_1033 NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Zinc-containing alcohol dehydrogenase superfamily protein; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1
YP_004774657.1	COGs: COG0385 Na+-dependent transporter; KEGG: chu:CHU_0673 lipoprotein transmembrane protein; SPTR: Possible lipoprotein transmembrane protein
YP_004774658.1	PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: mtt:Ftrac_1525 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: Membrane protein; TIGRFAM: Protein of unknown function DUF165
YP_004774659.1	PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR013471; KEGG: mtt:Ftrac_1526 RNAse Z; SPTR: Ribonuclease Z
YP_004774660.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: chu:CHU_1913 anti-anti-sigma regulatory factor; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-anti-sigma regulatory factor; TIGRFAM: Anti-sigma factor antagonist
YP_004774661.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro IPR001636; KEGG: chu:CHU_1912 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_004774662.1	PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: mtt:Ftrac_1201 MORN variant repeat-containing protein; SPTR:  phophatidylinositol-4-phosphate 5-kinase
YP_004774663.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: mtt:Ftrac_1202 acetyl-CoA acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004774664.1	KEGG: fsu:Fisuc_1659 hypothetical protein; SPTR:  uncharacterized protein
YP_004774665.1	InterPro IPR019734; KEGG: sli:Slin_2668 hypothetical protein; SPTR:  uncharacterized protein
YP_004774666.1	PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: mtt:Ftrac_1205 von willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR:  BatB protein
YP_004774667.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_1846 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein
YP_004774668.1	KEGG: mtt:Ftrac_1845 hypothetical protein; SPTR:  uncharacterized protein
YP_004774669.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: mtt:Ftrac_2294 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004774670.1	PFAM: Acyltransferase; COGs: COG3176  hemolysin; InterPro IPR002123; KEGG: lby:Lbys_2965 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase
YP_004774671.1	KEGG: lby:Lbys_2966 hemolysin A; SPTR: Hemolysin
YP_004774672.1	PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: rba:RB5820 L-fucose dehydrogenase; PFAM: Aldo/keto reductase; SPTR: Probable L-fucose dehydrogenase
YP_004774673.1	PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease; COGs: COG0738 Fucose permease; InterPro IPR005275:IPR011701; KEGG: etr:ETAE_0291 L-fucose permease; PFAM: Major facilitator superfamily MFS-1; SPTR: L-fucose:H+ symporter permease; TIGRFAM: L-fucose permease
YP_004774674.1	PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329  transposase; SPTR:  transposase
YP_004774676.1	PFAM: Glucuronate isomerase; COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: fbc:FB2170_10646 uronate isomerase; PFAM: Uronate isomerase; SPTR: Uronate isomerase
YP_004774677.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sus:Acid_1577 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004774678.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: phe:Phep_2202 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase
YP_004774681.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cly:Celly_2212 UspA domain-containing protein; PFAM: UspA; SPTR:  universal stress protein
YP_004774682.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004774683.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ROK family protein; PFAM: ROK; SPTR: Polyphosphate glucokinase
YP_004774684.1	SPTR:  uncharacterized protein
YP_004774685.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; glucose-1-phosphate thymidylyltransferase, short form; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: dfe:Dfer_2896 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form
YP_004774686.1	PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: zpr:ZPR_2906 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator
YP_004774687.1	PFAM: Ppx/GppA phosphatase; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: gfo:GFO_3499 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Ppx/GppA phosphatase
YP_004774688.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001450; KEGG: phe:Phep_3263 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Succinate dehydrogenase/fumarate reductase iron-sulfur subunit
YP_004774689.1	PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280:IPR003953:IPR004112; KEGG: zpr:ZPR_1359 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; SPTR: Succinate dehydrogenase flavoprotein subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria
YP_004774690.1	PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: gfo:GFO_0971 sterol desaturase; PFAM: Fatty acid hydroxylase; SPTR:  uncharacterized protein
YP_004774691.1	PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: fba:FIC_00652 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: Transcription elongation factor GreA
YP_004774692.1	PFAM: Protein of unknown function (DUF3500); KEGG: sli:Slin_5988 hypothetical protein; SPTR:  uncharacterized protein
YP_004774693.1	PFAM: FG-GAP repeat; InterPro IPR013517; KEGG: dfe:Dfer_4551 FG-GAP repeat protein; PFAM: FG-GAP; SPTR:  uncharacterized protein
YP_004774694.1	PFAM: NAD dependent epimerase/dehydratase; InterPro IPR001509; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase
YP_004774695.1	PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268:IPR011270:IPR000845; KEGG: ppn:Palpr_2188 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: Nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: Purine nucleoside phosphorylase I, inosine/guanosine-specific; Inosine guanosine/xanthosine phosphorylase
YP_004774696.1	PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: mtt:Ftrac_3110 nadph-dependent fmn reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Flavin reductase
YP_004774697.1	PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; COGs: COG0206 Cell division GTPase; InterPro IPR000158:IPR003008:IPR018316; KEGG: mtt:Ftrac_3297 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal
YP_004774698.1	PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR020823:IPR003494; KEGG: mtt:Ftrac_3296 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA
YP_004774699.1	KEGG: chu:CHU_2737 cell division protein; SPTR: Cell division protein
YP_004774700.1	PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR005758:IPR000713:IPR013221:IPR004101; KEGG: mtt:Ftrac_3294 UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase
YP_004774701.1	PFAM: Glycosyltransferase 28 N-terminal domain; Glycosyltransferase 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; InterPro IPR006009:IPR004276:IPR007235; KEGG: mtt:Ftrac_3293 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG
YP_004774702.1	PFAM: Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: mtt:Ftrac_3292 cell cycle protein; PFAM: Cell cycle protein; SPTR: Cell division protein
YP_004774703.1	PFAM: Mur ligase, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR005762:IPR013221:IPR004101; KEGG: sli:Slin_4750 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase
YP_004774704.1	PFAM: Glycosyl transferase 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR003524:IPR018480:IPR018481; KEGG: mtt:Ftrac_3290 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase
YP_004774705.1	PFAM: Mur ligase, catalytic domain; Mur ligase, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR005761:IPR000713:IPR013221:IPR004101; KEGG: mtt:Ftrac_3289 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; SPTR: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase
YP_004774706.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005543:IPR005311:IPR001460; KEGG: chu:CHU_2746 cell division protein, penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA; SMART: PASTA; SPTR:  penicillin-binding protein 2
YP_004774707.1	KEGG: mtt:Ftrac_3287 hypothetical protein; SPTR:  uncharacterized protein
YP_004774708.1	PFAM: MraW methylase; TIGRFAM: S-adenosyl-methyltransferase MraW; COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: mtt:Ftrac_3286 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_004774709.1	PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR003444:IPR020603; KEGG: mtt:Ftrac_3285 mraz protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ
YP_004774710.1	PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mtt:Ftrac_0985 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Octaprenyl-diphosphate synthase
YP_004774711.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG2937 Glycerol-3-phosphate O-acyltransferase; InterPro IPR002123; KEGG: mtt:Ftrac_3757 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR:  acyltransferase
YP_004774712.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; InterPro IPR011128:IPR006109; KEGG: mtt:Ftrac_3756 glycerol 3-phosphate dehydrogenase (nad(p)+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]
YP_004774713.1	PFAM: Calcineurin-like phosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: rba:RB5263 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Chromosome 2 SCAF14738, whole genome shotgun sequence.
YP_004774714.1	SPTR:  uncharacterized protein
YP_004774715.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: kva:Kvar_3375 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR:  phytanoyl-CoA dioxygenase
YP_004774716.1	PFAM: Peptidase M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: mtt:Ftrac_3155 STE24 endopeptidase; PFAM: Peptidase M48, Ste24p; SPTR: Ste24 endopeptidase
YP_004774717.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_3154 membrane protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004774718.1	KEGG: mtt:Ftrac_3153 pkd domain containing protein; SPTR:  uncharacterized protein
YP_004774719.1	PFAM: Protein of unknown function (DUF328); COGs: COG3022 conserved hypothetical protein; HAMAP: UPF0246 protein yaaA; InterPro IPR005583; KEGG: xne:XNC1_0702 hypothetical protein; PFAM: Protein of unknown function DUF328; SPTR: UPF0246 protein ALPR1_05590
YP_004774720.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: sat:SYN_02683 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004774721.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mtt:Ftrac_3122 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase
YP_004774722.1	COGs: COG1566 Multidrug resistance efflux pump; KEGG: mtt:Ftrac_3121 efflux transporter, rnd family, mfp subunit; SPTR: Efflux transporter, RND family, MFP subunit
YP_004774723.1	PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: mtt:Ftrac_3120 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004774724.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_3119 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR:  exported outer membrane protein
YP_004774727.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase; InterPro IPR004522:IPR004365:IPR004364; KEGG: mtt:Ftrac_3604 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb
YP_004774728.1	PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: mtt:Ftrac_3605 RNA polymerase, sigma 54 subunit, RpoN/SigL; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma factor 54
YP_004774729.1	PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: mtt:Ftrac_3606 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR:  uncharacterized protein
YP_004774730.1	KEGG: mtt:Ftrac_3608 hypothetical protein; SPTR:  uncharacterized protein
YP_004774731.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311:IPR012307; KEGG: pbs:Plabr_4063 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable IolI protein
YP_004774732.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: shg:Sph21_4487 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Probable glycosyl hydrolase
YP_004774734.1	KEGG: psl:Psta_2085 hypothetical protein; SPTR:  uncharacterized protein
YP_004774735.1	KEGG: cly:Celly_2858 phosphoesterase PA-phosphatase-like protein; SPTR: Phosphoesterase PA-phosphatase related protein
YP_004774736.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: chu:CHU_1271 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H
YP_004774737.1	PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; InterPro IPR006063:IPR006062; KEGG: lby:Lbys_2915 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_004774738.1	PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; InterPro IPR004651:IPR006062; KEGG: lby:Lbys_2914 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF
YP_004774739.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Histidine biosynthesis bifunctional protein hisIE; InterPro IPR008179:IPR002496; KEGG: lby:Lbys_2393 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase; SPTR: Phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase
YP_004774740.1	PFAM: AIG2-like family; InterPro IPR009288; KEGG: rpe:RPE_1058 hypothetical protein; PFAM: AIG2-like; SPTR:  uncharacterized protein
YP_004774741.1	SPTR:  uncharacterized protein
YP_004774742.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR001036:IPR005661; KEGG: mtt:Ftrac_2113 acriflavin resistance protein; PFAM: Acriflavin resistance protein; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; SPTR: Acriflavin resistance protein
YP_004774743.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_2112 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004774744.1	PFAM: Domain of unknown function (DUF305); InterPro IPR005183; KEGG: ote:Oter_4398 hypothetical protein; PFAM: Protein of unknown function DUF305; SPTR:  uncharacterized protein; manually curated
YP_004774745.1	PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; SPTR:  metal transport-related, exported protein; TIGRFAM: Secretion protein HlyD
YP_004774746.1	PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: mtt:Ftrac_1263 polyketide cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Polyketide cyclase/dehydrase
YP_004774747.1	PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase; COGs: COG2045 Phosphosulfolactate phosphohydrolase; HAMAP: 2-phosphosulfolactate phosphatase; InterPro IPR005238; KEGG: mtt:Ftrac_1906 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; SPTR: 2-phosphosulfolactate phosphatase
YP_004774748.1	PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR006223:IPR006222:IPR013977; KEGG: cly:Celly_0288 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein
YP_004774749.1	PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004774750.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_4206 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004774751.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR016092:IPR000361; KEGG: mtt:Ftrac_1573 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion
YP_004774753.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283:IPR000728:IPR010918; KEGG: mtt:Ftrac_1576 thiamine-phosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Thiamine-phosphate kinase; TIGRFAM: Thiamine-monophosphate kinase
YP_004774754.1	KEGG: mtt:Ftrac_3094 hypothetical protein; SPTR:  uncharacterized protein
YP_004774755.1	PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566:IPR002792:IPR010280; KEGG: mtt:Ftrac_0805 23S rRNA m(5)u-1939 methyltransferase; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: 23S rRNA (Uracil-5-)-methyltransferase RumA; TIGRFAM: 23S rRNA methyltransferase/RumA
YP_004774756.1	KEGG: bvu:BVU_0066 hypothetical protein; SPTR:  exported protein
YP_004774759.1	PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: psn:Pedsa_1400 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Dehydrogenase/reductase SDR family member 7B
YP_004774760.1	PFAM: Uncharacterized conserved protein (DUF2075); COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: mtt:Ftrac_2575 superfamily I DNA helicase; SPTR: Superfamily I DNA helicase
YP_004774761.1	TIGRFAM: gliding motility-associated lipoprotein GldH; InterPro IPR020018; KEGG: chu:CHU_0291 motility protein; SPTR: Lipoprotein; TIGRFAM: Gliding motility-associated lipoprotein, GldH
YP_004774762.1	PFAM: PSP1 C-terminal conserved region; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: mtt:Ftrac_3345 PSP1 domain protein; PFAM: PSP1, C-terminal; SPTR: Stage 0 sporulation protein YaaT; manually curated
YP_004774763.1	PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: mtt:Ftrac_3346 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase
YP_004774764.1	PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR006293:IPR018329:IPR014001:IPR001650:IPR 002121:IPR011545:IPR018982; KEGG: mtt:Ftrac_3348 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal
YP_004774765.1	PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR000644:IPR001347; KEGG: chu:CHU_0298 KpsF/GutQ family sugar isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ
YP_004774766.1	PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: sli:Slin_5196 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Mannose-1-phosphate guanylyltransferase
YP_004774767.1	PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; COGs: COG2103 sugar phosphate isomerase; HAMAP: N-acetylmuramic acid 6-phosphate etherase; InterPro IPR005488; KEGG: dfe:Dfer_3685 N-acetylmuramic acid-6-phosphate etherase; SPTR: N-acetylmuramic acid 6-phosphate etherase; TIGRFAM: Glucokinase regulatory-like protein
YP_004774768.1	COGs: COG2971 N-acetylglucosamine kinase; KEGG: bfs:BF0368 hypothetical protein; SPTR:  uncharacterized protein
YP_004774769.1	PFAM: Cytochrome b5-like Heme/Steroid binding domain; InterPro IPR001199; KEGG: phe:Phep_3698 cytochrome b5; PFAM: Cytochrome b5; SPTR:  uncharacterized protein
YP_004774770.1	PFAM: Arginase; InterPro IPR006035; KEGG: mtt:Ftrac_2821 arginase/agmatinase/formiminoglutamase; PFAM: Ureohydrolase; SPTR: Formiminoglutamase-related protein
YP_004774771.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205:IPR001041:IPR001433; KEGG: mtt:Ftrac_1690 NADH:ubiquinone oxidoreductase, subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; SPTR: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit
YP_004774772.1	PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; InterPro IPR000438:IPR000022; KEGG: mtt:Ftrac_1693 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit
YP_004774773.1	PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: shg:Sph21_0356 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: MscS Mechanosensitive ion channel
YP_004774774.1	PFAM: Carbon starvation protein CstA; COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: mtt:Ftrac_2374 carbon starvation protein CstA; PFAM: Carbon starvation protein CstA; SPTR: Carbon starvation protein A
YP_004774775.1	KEGG: mtt:Ftrac_1015 hypothetical protein; SPTR:  uncharacterized protein
YP_004774776.1	KEGG: rbi:RB2501_07210 hypothetical protein; SPTR:  uncharacterized protein
YP_004774777.1	SPTR:  uncharacterized protein
YP_004774778.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR006275:IPR005481:IPR005479:IPR005480; KEGG: mtt:Ftrac_1723 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent
YP_004774781.1	KEGG: ttu:TERTU_2611 hypothetical protein; SPTR: Glutamate--tRNA ligase
YP_004774782.1	PFAM: Xylose isomerase-like TIM barrel; InterPro IPR012307; KEGG: gfo:GFO_1146 TIM barrel domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Protein containing xylose isomerase-like TIM barrel domain
YP_004774783.1	PFAM: Orthopoxvirus protein of unknown function (DUF830); InterPro IPR010529; KEGG: smt:Smal_3805 hypothetical protein; SPTR:  uncharacterized protein
YP_004774784.1	SPTR:  uncharacterized protein
YP_004774785.1	PFAM: PHP domain; COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR003583:IPR003141:IPR004013; KEGG: mtt:Ftrac_0797 php domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; SPTR: PHP domain protein
YP_004774786.1	KEGG: mtt:Ftrac_0798 hypothetical protein; SPTR:  uncharacterized protein
YP_004774787.1	PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: mtt:Ftrac_0799 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR
YP_004774788.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase; InterPro IPR002082:IPR006132:IPR006131; KEGG: sli:Slin_0344 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic
YP_004774789.1	PFAM: CBS domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase; COGs: COG0031 Cysteine synthase; InterPro IPR000644:IPR001926; KEGG: mtt:Ftrac_0803 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Cysteine synthase
YP_004774790.1	KEGG: cpb:Cphamn1_2098 hypothetical protein; SPTR:  uncharacterized protein
YP_004774791.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: gfo:GFO_3052 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SPTR: Sensor histidine kinase/response regulator
YP_004774792.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: shg:Sph21_3147 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Sigma-54 dependent DNA-binding response regulator
YP_004774795.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391:IPR015942; KEGG: dfe:Dfer_3460 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase
YP_004774796.1	PFAM: Glutamine amidotransferases class-II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: sli:Slin_5971 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; SPTR:  amidophosphoribosyltransferase
YP_004774797.1	PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: mtt:Ftrac_1155 aminopeptidase; PFAM: Peptidase M42; SPTR: M42 glutamyl aminopeptidase
YP_004774798.1	KEGG: mtt:Ftrac_2823 hypothetical protein; SPTR:  uncharacterized protein
YP_004774799.1	PFAM: Protein of unknown function, DUF479; COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: fbc:FB2170_12051 hypothetical protein; PFAM: Acyl carrier protein phosphodiesterase; SPTR: Acyl carrier protein phosphodiesterase
YP_004774800.1	TIGRFAM: DNA helicase, COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR003593; KEGG: sli:Slin_3380 ATPase AAA; SMART: ATPase, AAA+ type, core; SPTR: DNA-binding protein SMUBP-2
YP_004774801.1	KEGG: pdi:BDI_2512 hypothetical protein; SPTR:  uncharacterized protein
YP_004774802.1	KEGG: gfo:GFO_2225 secreted protein; SPTR: Secreted protein
YP_004774803.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein lepA; InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842; KEGG: chu:CHU_1717 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor 4; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein
YP_004774804.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672:IPR020630:IPR020631; KEGG: sli:Slin_1575 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; SPTR: Bifunctional protein FolD
YP_004774805.1	PFAM: Radical SAM superfamily; COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: mtt:Ftrac_2877 radical sam domain protein; PFAM: Radical SAM; SPTR: Radical activating enzyme
YP_004774806.1	PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: dfe:Dfer_0087 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR:  outer membrane protein, OmpA family
YP_004774807.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: srm:SRM_02406 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004774808.1	PFAM: SusD family; InterPro IPR012944; KEGG: srm:SRM_02405  outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004774809.1	KEGG: shg:Sph21_1774 hypothetical protein
YP_004774810.1	PFAM: Subtilase; InterPro IPR000209; KEGG: sli:Slin_5991 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: MAM domain protein
YP_004774811.1	KEGG: sli:Slin_3697 hypothetical protein; SPTR:  uncharacterized protein
YP_004774812.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family
YP_004774813.1	PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX)
YP_004774814.1	PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: mtt:Ftrac_3564 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl tetrahydrobiopterin synthase
YP_004774815.1	PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: mtt:Ftrac_3472 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19; SPTR: Lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19
YP_004774816.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR004487:IPR003593:IPR010603:IPR013093:IPR 019489; KEGG: mtt:Ftrac_1139 ATP-dependent clp protease ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: Clp protease, ATP-binding subunit ClpX
YP_004774817.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: ATP-dependent Clp protease proteolytic subunit; InterPro IPR001907; KEGG: mtt:Ftrac_1138 ATP-dependent clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; SPTR: ATP-dependent Clp protease proteolytic subunit
YP_004774818.1	PFAM: Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215:IPR008881; KEGG: mtt:Ftrac_1137 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor
YP_004774819.1	PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR004811:IPR003607:IPR006674:IPR007685:IPR 004095:IPR002912; KEGG: mtt:Ftrac_1136 (p)ppGpp synthetase I, spot/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT protein
YP_004774820.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: chu:CHU_1703 ferric uptake regulator protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator protein
YP_004774821.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR003658:IPR002645; KEGG: mtt:Ftrac_1134 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist
YP_004774822.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: mtt:Ftrac_1133 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase
YP_004774823.1	PFAM: PKD domain; InterPro IPR000601:IPR001220; KEGG: msv:Mesil_2801 conserved repeat domain protein; PFAM: PKD; Legume lectin, beta chain; SMART: PKD; SPTR: Cell surface protein
YP_004774824.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: sli:Slin_5231 hypothetical protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004774825.1	KEGG: gau:GAU_1088 hypothetical protein; SPTR:  uncharacterized protein
YP_004774826.1	PFAM: Protein of unknown function (DUF2752); KEGG: psn:Pedsa_3315 hypothetical protein; SPTR:  uncharacterized protein
YP_004774827.1	PFAM: TM2 domain; InterPro IPR007829; KEGG: psn:Pedsa_3314 TM2 domain containing protein; SPTR: TM2 domain protein
YP_004774828.1	KEGG: psm:PSM_A3082 lipoprotein, SPTR:  uncharacterized protein
YP_004774829.1	PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: chu:CHU_2346 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding protein family
YP_004774830.1	PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type; COGs: COG2502 Asparagine synthetase A; HAMAP: Aspartate--ammonia ligase; InterPro IPR004618; KEGG: psn:Pedsa_1836 aspartate-ammonia ligase; PFAM: Aspartate--ammonia ligase; SPTR: Aspartate-ammonia ligase; TIGRFAM: Aspartate--ammonia ligase
YP_004774831.1	PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019405; KEGG: cpi:Cpin_0750 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394; SPTR:  6-phosphogluconolactonase
YP_004774832.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: gfo:GFO_3559 Na(+)/H(+) antiporter subunit G; PFAM: Na+/H+ antiporter subunit; SPTR:  uncharacterized protein; TIGRFAM: Na+/H+ antiporter subunit
YP_004774833.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); InterPro IPR007208; KEGG: gfo:GFO_3558  monovalent cation/H+ antiporter subunit F; PFAM: Multiple resistance and pH regulation protein F; SPTR: Monovalent cation/proton antiporter, MrpF/PhaF family protein
YP_004774834.1	PFAM: Na+/H+ ion antiporter subunit; COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: gfo:GFO_3557  monovalent cation/H+ antiporter subunit E; PFAM: cation antiporter; SPTR: Na+/H+ ion antiporter family protein
YP_004774835.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: gfo:GFO_3556 Na(+)/H(+) antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; SPTR: Na(+)/H(+) antiporter subunit D
YP_004774836.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: zpr:ZPR_4508 monovalent cation/H+ antiporter subunit C; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; SPTR:  monovalent cation/H+ antiporter subunit C
YP_004774837.1	PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; InterPro IPR007182; KEGG: zpr:ZPR_4509 Na(+)/H(+) antiporter subunit B; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Na(+)/H(+) antiporter subunit B
YP_004774838.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001516:IPR001750; KEGG: gfo:GFO_3553  monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; SPTR: Na(+)/H(+) antiporter subunit A
YP_004774839.1	PFAM: Phosphoenolpyruvate carboxylase; COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR001449; KEGG: mtt:Ftrac_3278 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; SPTR:  uncharacterized protein
YP_004774840.1	PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: cly:Celly_2906 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase
YP_004774841.1	PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: cao:Celal_3582 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004774842.1	KEGG: ran:Riean_1827 hypothetical protein; SPTR:  uncharacterized protein
YP_004774843.1	PFAM: PIN domain; InterPro IPR002716; KEGG: ran:Riean_1828 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein
YP_004774845.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase; COGs: COG1505 Serine protease of the peptidase S9A; InterPro IPR004106:IPR001375; KEGG: cat:CA2559_02385 prolyl endopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; SPTR: Prolyl endopeptidase
YP_004774846.1	PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro IPR014940; KEGG: pth:PTH_2363 alpha/beta fold family hydrolase; PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; SPTR: Palmitoyl-CoA hydrolase
YP_004774847.1	PFAM: Protein of unknown function (DUF2805); TIGRFAM: TIGR03643 family protein; InterPro IPR019882; KEGG: cao:Celal_3494 hypothetical protein; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03643
YP_004774848.1	PFAM: FAD binding domain of DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: cly:Celly_0728 DNA photolyase FAD-binding protein; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: Deoxyribodipyrimidine photolyase; manually curated
YP_004774849.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2256); InterPro IPR017136; KEGG: cly:Celly_0726 hypothetical protein; PFAM: Uncharacterised conserved protein UCP037205; SPTR:  uncharacterized protein; manually curated
YP_004774850.1	PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; COGs: COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; InterPro IPR007357:IPR005101; KEGG: cly:Celly_0725 deoxyribodipyrimidine photolyase-like protein; PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; SPTR: Photolyase
YP_004774853.1	PFAM: Prolyl oligopeptidase; Carboxylesterase; COGs: COG0657 Esterase/lipase; InterPro IPR002018; KEGG: Carboxylesterase type B; PFAM: Carboxylesterase, type B; SPTR: Carboxylesterase type B
YP_004774854.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein
YP_004774855.1	PFAM: Subtilase; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: mno:Mnod_8803 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin
YP_004774857.1	PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fjo:Fjoh_2128 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel protein
YP_004774858.1	PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: phe:Phep_2806 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR:  uncharacterized protein
YP_004774859.1	PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family; InterPro IPR012669; KEGG: fjo:Fjoh_4248 pectate lyase; PFAM: Pectic acid lyase; SPTR: Pectate lyase; TIGRFAM: Pectic acid lyase
YP_004774860.1	KEGG: rba:RB5312 pectate lyase; SPTR: Pectate lyase
YP_004774861.1	PFAM:  glycosyl hydrolase of unknown function (DUF1680); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: shg:Sph21_2347 protein of unknown function DUF1680; PFAM: Protein of unknown function DUF1680; SPTR:  uncharacterized protein
YP_004774862.1	KEGG: rbi:RB2501_03935 chitinase; SPTR: Chitinase
YP_004774863.1	KEGG: gfo:GFO_1926 hypothetical protein; SPTR:  uncharacterized protein
YP_004774864.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1509 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulphatase A
YP_004774865.1	KEGG: cdf:CD0640 hypothetical protein; SPTR:  uncharacterized protein
YP_004774866.1	KEGG: pbs:Plabr_3546 hypothetical protein; SPTR:  uncharacterized protein
YP_004774867.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psn:Pedsa_1812 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004774868.1	PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_6635 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004774869.1	PFAM: TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2273 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004774870.1	KEGG: shg:Sph21_1826 hypothetical protein; SPTR:  uncharacterized protein
YP_004774871.1	TIGRFAM:  DNA modification/repair radical SAM protein; COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR007197; KEGG: cly:Celly_2902 radical SAM domain-containing protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein
YP_004774872.1	TIGRFAM: probable DNA metabolism protein; KEGG: cly:Celly_2901 hypothetical protein; SPTR:  uncharacterized protein
YP_004774873.1	SPTR:  uncharacterized protein
YP_004774875.1	KEGG: cly:Celly_1505 hypothetical protein; SPTR:  uncharacterized protein
YP_004774877.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: cpy:Cphy_3594 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004774878.1	SPTR:  uncharacterized protein
YP_004774879.1	KEGG: lby:Lbys_1904 peptidase M56 blar1; SPTR: TonB-dependent receptor
YP_004774881.1	SPTR:  uncharacterized protein
YP_004774882.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: mtt:Ftrac_1705 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR:  ribonuclease BN; TIGRFAM: Ribonuclease BN
YP_004774883.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; InterPro IPR006684:IPR006683; KEGG: psn:Pedsa_1080 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase
YP_004774884.1	PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: mtt:Ftrac_1707 aminodeoxychorismate lyase; PFAM: Uncharacterised protein family YceG-like; SPTR: Aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like
YP_004774885.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009  translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: psn:Pedsa_0384 SUA5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Sua5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC
YP_004774886.1	PFAM: WbqC-like protein family; InterPro IPR014985; KEGG: mtt:Ftrac_1709 wbqc-like family protein; PFAM: WbqC-like protein family; SPTR:  uncharacterized protein
YP_004774887.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase associated with various cellular activities (AAA); COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489; KEGG: chu:CHU_1079 ATP-dependent Clp protease, ATP-binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Negative regulator of genetic competence ClpC/MecB
YP_004774888.1	KEGG: cpi:Cpin_1731 hypothetical protein; SPTR:  integral membrane protein
YP_004774889.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: sli:Slin_0603 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004774890.1	KEGG: sli:Slin_0601 hypothetical protein; SPTR:  uncharacterized protein
YP_004774891.1	PFAM: Glycosyl hydrolase 92; TIGRFAM: alpha-1,2-mannosidase, COGs: COG3537  alpha-1 2-mannosidase; InterPro IPR005887:IPR012939; KEGG: fjo:Fjoh_3125  alpha-1,2-mannosidase; PFAM: Glycosyl hydrolase 92; SPTR:  alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase
YP_004774892.1	PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR001509; KEGG: lby:Lbys_1312 udp-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase
YP_004774893.1	PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: sli:Slin_0097 ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21
YP_004774894.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: chu:CHU_3398 integrase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 1
YP_004774895.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; InterPro IPR003489; KEGG: mtt:Ftrac_2412 sigma 54 modulation protein/ribosomal protein s30ea; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: Site-specific recombinase, phage integrase/ribosomal subunit interface protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004774896.1	PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: dte:Dester_0127 glycosyl transferase 39; PFAM: Glycosyl transferase, family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004774897.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: sli:Slin_2554 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Glucose-fructose oxidoreductase
YP_004774898.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: nis:NIS_1112 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glyoxalase
YP_004774899.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR005242; KEGG: nis:NIS_1113 hypothetical protein; SPTR: Membrane protein
YP_004774900.1	SPTR:  uncharacterized protein
YP_004774901.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; COGs: COG0264 Translation elongation factor Ts; HAMAP: Elongation factor Ts; InterPro IPR001816:IPR000449:IPR014039; KEGG: mtt:Ftrac_3365 translation elongation factor ts (ef-ts); PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B
YP_004774902.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0052 Ribosomal protein S2; InterPro IPR005706:IPR001865; KEGG: chu:CHU_3037 30S ribosomal subunit protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid
YP_004774903.1	PFAM: Ribosomal protein S9/S16; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: lby:Lbys_2853 ssu ribosomal protein s9p; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9
YP_004774904.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; COGs: COG0102 Ribosomal protein L13; InterPro IPR005823:IPR005822; KEGG: sli:Slin_4741 ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type
YP_004774905.1	PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: fjo:Fjoh_2193 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: GreA/GreB family elongation factor
YP_004774906.1	KEGG: dfe:Dfer_3262 hypothetical protein; SPTR:  uncharacterized protein
YP_004774907.1	PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: cao:Celal_2821 natural resistance-associated macrophage protein; SPTR:  uncharacterized protein
YP_004774908.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004774909.1	PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329  transposase; SPTR:  transposase
YP_004774910.1	PFAM: C4-dicarboxylate anaerobic carrier; COGs: COG1288 membrane protein; InterPro IPR018385; KEGG: cao:Celal_1607 C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic carrier-like; SPTR: C4-dicarboxylate anaerobic carrier
YP_004774911.1	PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: lbf:LBF_3228 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR:  uncharacterized protein
YP_004774912.1	KEGG: psl:Psta_1669 hypothetical protein; SPTR:  uncharacterized protein
YP_004774914.1	KEGG:  extracellular metal-dependent peptidase; SPTR:  uncharacterized protein
YP_004774915.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: Soluble epoxide hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Soluble epoxide hydrolase
YP_004774916.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1488 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004774917.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1487 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004774918.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: phe:Phep_0775 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004774919.1	PFAM: Acetyl xylan esterase (AXE1); COGs: COG0412 Dienelactone hydrolase; InterPro IPR008391; KEGG: shg:Sph21_0373 acetyl xylan esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl xylan esterase superfamily protein
YP_004774920.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683:IPR004104; KEGG: lby:Lbys_1950 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold domain protein
YP_004774921.1	PFAM: Membrane dipeptidase (Peptidase M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR006311:IPR008257; KEGG: tro:trd_1717 glutamine amidotransferase, class II/dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR:  uncharacterized protein
YP_004774922.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: phe:Phep_0774 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine/galactosamine-6-phosphate isomerase
YP_004774923.1	PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: shg:Sph21_0370 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Periplasmic binding protein/LacI transcriptional regulator
YP_004774924.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: dfe:Dfer_5734 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR:  ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004774925.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: sli:Slin_3389 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR
YP_004774926.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910; KEGG: sli:Slin_3960 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004774927.1	KEGG: shg:Sph21_2957 hypothetical protein; SPTR:  uncharacterized protein
YP_004774928.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR005674:IPR000383:IPR013736; KEGG: dfe:Dfer_2454 X-Pro dipeptidyl-peptidase domain protein; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15; SPTR: X-Pro dipeptidyl-peptidase domain protein; TIGRFAM: CocE/NonD hydrolase
YP_004774929.1	PFAM: Endoribonuclease L-PSP; COGs: COG0251  translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: fbc:FB2170_04510 transcription regulator; PFAM: Endoribonuclease L-PSP; SPTR: Transcription regulator
YP_004774930.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: dfe:Dfer_2456 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter
YP_004774931.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: sti:Sthe_1347 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltranspeptidase; TIGRFAM: Gamma-glutamyltranspeptidase
YP_004774932.1	InterPro IPR006311; KEGG: sus:Acid_6156 hypothetical protein; SPTR:  uncharacterized protein
YP_004774933.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_09500  sulfatase; PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase)
YP_004774935.1	PFAM: Protein of unknown function (DUF1696); InterPro IPR012544; KEGG: cpi:Cpin_2100 hypothetical protein; PFAM: Protein of unknown function DUF1696; SPTR:  uncharacterized protein
YP_004774936.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4312 cerebroside-sulfatase; PFAM: Sulfatase; SPTR: Arylsulphatase A
YP_004774937.1	PFAM:  esterase; InterPro IPR000801; KEGG: dfe:Dfer_1714  esterase; PFAM:  esterase; SPTR:  esterase
YP_004774938.1	TIGRFAM: YD repeat (two copies); InterPro IPR006530; KEGG: phe:Phep_1097 YD repeat-containing protein; SPTR: YD repeat protein; TIGRFAM: YD repeat
YP_004774940.1	TIGRFAM: RHS repeat-associated core domain; InterPro IPR006530; KEGG: cpi:Cpin_7099 hypothetical protein; SPTR: YD repeat protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat
YP_004774942.1	PFAM: IstB-like ATP binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: plt:Plut_1831 ATPase; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: ATPase
YP_004774949.1	KEGG: psn:Pedsa_0287 hypothetical protein; SPTR:  uncharacterized protein
YP_004774951.1	KEGG: zpr:ZPR_2242 hypothetical protein; SPTR:  uncharacterized protein
YP_004774952.1	PFAM:  addiction module component; TIGRFAM:  addiction module component, TIGR02574 family; InterPro IPR013406; PFAM: Addiction module component, CHP02574
YP_004774953.1	PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: gsu:GSU0055 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR:  uncharacterized protein
YP_004774954.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: cly:Celly_2415 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat family protein
YP_004774956.1	PFAM: GAF domain; PAS fold; TIGRFAM: PAS domain S-box; InterProIPR000014:IPR001610:IPR003018:IPR013655:IPR 013767; KEGG: cts:Ctha_0021 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; GAF; PAS fold; SMART: GAF; PAS; PAC motif; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004774957.1	KEGG: fbc:FB2170_16316 hypothetical protein; SPTR:  uncharacterized protein
YP_004774958.1	COGs: COG0786 Na+/glutamate symporter; InterPro IPR004445; KEGG: tel:tlr1046 hypothetical protein; PFAM: Sodium/glutamate symporter; SPTR: Tlr1046 protein
YP_004774959.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; KEGG: cpi:Cpin_5554 xylanase; SPTR: Xylanase
YP_004774960.1	PFAM: Protein of unknown function (DUF2569); InterPro IPR002931:IPR019690; KEGG: zpr:ZPR_3638 transglutaminase-like enzyme; PFAM: Protein of unknown function DUF2569; Transglutaminase-like; SPTR:  uncharacterized protein
YP_004774961.1	KEGG: ppn:Palpr_1379 hypothetical protein; SPTR:  uncharacterized protein
YP_004774962.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216  arylsulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfate sulfatase (GALNS)
YP_004774964.1	KEGG: sus:Acid_2744 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004774965.1	PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cly:Celly_0750 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter
YP_004774966.1	PFAM: Glycosyl hydrolase 3 N terminal domain; Beta-lactamase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: zpr:ZPR_4696 beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; SPTR: Beta-N-acetylglucosaminidase
YP_004774967.1	PFAM: Response regulator receiver domain; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789; KEGG: zpr:ZPR_1891 response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator
YP_004774968.1	PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: rba:RB5657 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SPTR:  uncharacterized protein
YP_004774969.1	PFAM: Domain of unknown function DUF77; COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: cpi:Cpin_3718 hypothetical protein; PFAM: Protein of unknown function DUF77; SPTR:  uncharacterized protein
YP_004774970.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: mtt:Ftrac_0555 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase
YP_004774971.1	PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; HAMAP: Ribosomal protein L25; InterPro IPR001021; KEGG: sli:Slin_2924 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25
YP_004774972.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: dfe:Dfer_0421 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase
YP_004774973.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003018:IPR001610:IPR003661:IPR 003594:IPR001789:IPR013767:IPR013656:IPR013655; KEGG: sli:Slin_0621 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; PAS fold-4; GAF; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; PAS; PAC motif; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS
YP_004774974.1	PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: dfe:Dfer_2702 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004774975.1	PFAM: Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR011583:IPR001223; KEGG: fjo:Fjoh_4175 glycoside hydrolase; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II; SPTR: Chitinase
YP_004774976.1	PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004774977.1	PFAM: NUDIX domain; InterPro IPR000086; KEGG: lic:LIC20067 MutT-like protein; PFAM: NUDIX hydrolase domain; SPTR: Protein containing NUDIX hydrolase, core domain
YP_004774978.1	PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR006311:IPR000192; KEGG: dfe:Dfer_3047 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aminotransferase class V
YP_004774979.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003661:IPR003594; KEGG: mtt:Ftrac_0126 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide repeat; SPTR:  sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB
YP_004774980.1	PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: fba:FIC_00447 4-hydroxybutyrate coenzyme A transferase; PFAM: Acetyl-CoA hydrolase/transferase; SPTR: 4-hydroxybutyrate coenzyme A transferase
YP_004774981.1	PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: mtt:Ftrac_3406 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein
YP_004774982.1	KEGG: mtt:Ftrac_0956 hypothetical protein; SPTR:  uncharacterized protein
YP_004774984.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003661:IPR003594:IPR001789:IPR 013767:IPR013656; KEGG: signal transduction histidine-protein kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; PAS fold-4; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; SPTR: Sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS
YP_004774985.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: mtt:Ftrac_0524 catalytic domain-containing protein of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase
YP_004774986.1	PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR020817:IPR008136:IPR001453; KEGG: mtt:Ftrac_0526 competence/damage-inducible protein CinA; PFAM: CinA, C-terminal; Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; Molybdenum cofactor synthesis; CinA, C-terminal
YP_004774987.1	PFAM: Dihydrofolate reductase; COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796; KEGG: cly:Celly_1950 dihydrofolate reductase region; PFAM: Dihydrofolate reductase region; SPTR: Dihydrofolate reductase
YP_004774988.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004774989.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_3220 UspA domain-containing protein; PFAM: UspA; SPTR:  universal stress protein
YP_004774990.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; D-3-phosphoglycerate dehydrogenase; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912; KEGG: zpr:ZPR_2876 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; SPTR: D-3-phosphoglycerate dehydrogenase
YP_004774991.1	KEGG: chu:CHU_1801 hypothetical protein; SPTR:  uncharacterized protein
YP_004774992.1	KEGG: psn:Pedsa_3817 hypothetical protein; SPTR:  uncharacterized protein
YP_004774993.1	PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: fbc:FB2170_07659 hypothetical protein; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR:  transcriptional regulator, TetR family
YP_004774994.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR003439; KEGG: fps:FP0422 ABC transporter permease/ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Toxin secretion ABC transporter ATP-binding protein
YP_004774995.1	COGs: COG1566 Multidrug resistance efflux pump; KEGG: cao:Celal_1044 biotin/lipoyl attachment domain-containing protein; SPTR:  HlyD family secretion protein
YP_004774996.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: rbi:RB2501_08275 outer membrane efflux protein; SPTR:  outer membrane efflux protein
YP_004774997.1	PFAM: Uncharacterized conserved protein (DUF2183); COGs: COG4850 conserved hypothetical protein; InterPro IPR019236; KEGG: mtt:Ftrac_2155 hypothetical protein; PFAM: Protein of unknown function DUF2183; SPTR:  uncharacterized protein
YP_004774998.1	PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: cly:Celly_0215 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator
YP_004774999.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: 60 kDa chaperonin; InterPro IPR001844:IPR002423; KEGG: chu:CHU_1828 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60
YP_004775000.1	PFAM: Chaperonin 10 Kd subunit; COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10, subgroup; InterPro IPR001476:IPR020818; KEGG: aas:Aasi_0309 hypothetical protein; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin
YP_004775001.1	KEGG: cpi:Cpin_2333 hypothetical protein; SPTR:  uncharacterized protein
YP_004775002.1	PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: zpr:ZPR_2830 sterol desaturase-related protein; PFAM: Fatty acid hydroxylase; SPTR: C-5 sterol desaturase (Sterol-C5-desaturase)
YP_004775003.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; InterPro IPR004692; KEGG: mtt:Ftrac_0761 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit
YP_004775004.1	KEGG: mtt:Ftrac_0760 hypothetical protein; SPTR:  uncharacterized protein
YP_004775005.1	KEGG: mtt:Ftrac_0759 hypothetical protein; SPTR: Lipoprotein; manually curated
YP_004775006.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593:IPR002078:IPR002197; KEGG: chu:CHU_1822 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Sigma-54-dependent transcriptional regulator
YP_004775007.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR005839:IPR006463:IPR006638:IPR013848:IPR 007197:IPR002792; KEGG: mtt:Ftrac_0757 tRNA-i(6)a37 thiotransferase enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-I(6)A37 thiotransferase enzyme MiaB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB
YP_004775008.1	PFAM: Catalase; Catalase-related immune-responsive; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: Catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; SPTR: Catalase
YP_004775009.1	PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: zpr:ZPR_2082 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR:  uncharacterized protein
YP_004775010.1	PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: gfo:GFO_1564 hypothetical protein; PFAM: Bacterial surface antigen (D15); SPTR: Outer membrane protein
YP_004775012.1	PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126; KEGG: gfo:GFO_3388 DNA polymerase IV 2; PFAM: DNA-repair protein, UmuC-like; SPTR: DNA polymerase IV 1
YP_004775013.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_1884 glutamate dehydrogenase (nadp); PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glutamate dehydrogenase (NADP)
YP_004775014.1	PFAM: chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: mtt:Ftrac_0756 chorismate binding protein; PFAM: Chorismate binding, C-terminal; SPTR: Para-aminobenzoate synthase, component I
YP_004775015.1	PFAM: YceI-like domain; InterPro IPR007372; KEGG: mtt:Ftrac_0755 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YCE I like family protein
YP_004775016.1	COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: cly:Celly_1903 hexapeptide transferase; SPTR: Hexapeptide transferase
YP_004775017.1	PFAM: Isocitrate dehydrogenase kinase/phosphatase (AceK); COGs: COG4579 Isocitrate dehydrogenase kinase/phosphatase; HAMAP: Isocitrate dehydrogenase kinasephosphatase; InterPro IPR010452; KEGG: isocitrate dehydrogenase kinase/phosphatase; PFAM: Isocitrate dehydrogenase kinasephosphatase; SPTR: [isocitrate dehydrogenase (NADP(+))] kinase
YP_004775018.1	PFAM: NUDIX domain; InterPro IPR000086; KEGG: ppn:Palpr_1834 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX family hydrolase
YP_004775019.1	PFAM: Protein of unknown function (DUF819); COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: mtt:Ftrac_2985 hypothetical protein; PFAM: Protein of unknown function DUF819; SPTR: Membrane protein
YP_004775020.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; SPTR: NAD-reducing hydrogenase, alpha subunit; manually curated
YP_004775021.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655:IPR003661:IPR003594:IPR001789:IPR 000014:IPR001610; KEGG: dfe:Dfer_2525 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; SPTR:  sensory box histidine kinase/response regulator; TIGRFAM: PAS
YP_004775022.1	SPTR:  uncharacterized protein
YP_004775023.1	PFAM: Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: dfe:Dfer_2804 methionine synthase; PFAM: Homocysteine S-methyltransferase; SPTR: Methionine synthase
YP_004775024.1	PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR000489:IPR003759:IPR006158:IPR004223:IPR 011822; KEGG: chu:CHU_1434 methionine synthase; PFAM: Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; SPTR: Methionine synthase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_004775025.1	PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171:IPR004620; KEGG: mtt:Ftrac_3624 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase
YP_004775026.1	SPTR:  uncharacterized protein
YP_004775027.1	PFAM: HD domain; Poly A polymerase head domain; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674; KEGG: mtt:Ftrac_3402 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: PolyA polymerase
YP_004775028.1	PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: mtt:Ftrac_3403 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR:  uncharacterized protein
YP_004775029.1	TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; KEGG: chu:CHU_1793 dihydroorotase; SPTR: Dihydroorotase (DHOase)
YP_004775030.1	KEGG: dfe:Dfer_4468 hypothetical protein; SPTR:  uncharacterized protein
YP_004775031.1	KEGG: mtt:Ftrac_1792 membrane protein; SPTR:  uncharacterized protein
YP_004775032.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3008 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family
YP_004775033.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3007 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family
YP_004775034.1	KEGG: bfo:BRAFLDRAFT_137021 hypothetical protein; SPTR:  uncharacterized protein
YP_004775035.1	KEGG: bfo:BRAFLDRAFT_137021 hypothetical protein; SPTR:  uncharacterized protein
YP_004775037.1	PFAM: Polysaccharide biosynthesis/export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: fps:FP1299 polysaccharide exporter; PFAM: Polysaccharide export protein; SPTR:  polysaccharide export protein, BexD/CtrA/VexA family
YP_004775038.1	PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856:IPR005702; KEGG: mtt:Ftrac_0603 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; SPTR:  tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein
YP_004775039.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732:IPR014026:IPR014027:IPR017476; KEGG: cte:CT0227 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase
YP_004775040.1	PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: fba:FIC_00335 lipopolysaccharide biosynthesis protein WzxC; PFAM: Polysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein wzxC
YP_004775041.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fba:FIC_00336 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004775042.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: bth:BT_2882 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase
YP_004775043.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004775044.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004775045.1	PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: shg:Sph21_2014 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR:  lipopolysaccharide biosynthesis protein
YP_004775046.1	PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: shg:Sph21_2015 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase
YP_004775047.1	PFAM: Polysaccharide pyruvyl transferase; COGs: COG2327 conserved hypothetical protein; KEGG: shg:Sph21_2016 hypothetical protein; SPTR:  uncharacterized protein
YP_004775048.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: shg:Sph21_2017 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: RfbQ
YP_004775049.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: aeh:Mlg_2365 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1
YP_004775050.1	PFAM: O-Antigen ligase; KEGG: plt:Plut_1854 hypothetical protein; SPTR:  uncharacterized protein
YP_004775051.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfs:BF1021  glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004775052.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: cly:Celly_2632  acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR:  acetyltransferase
YP_004775053.1	PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: amu:Amuc_2097 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase
YP_004775054.1	PFAM: Polysaccharide pyruvyl transferase; KEGG: dba:Dbac_2549 hypothetical protein; SPTR:  uncharacterized protein
YP_004775055.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: dba:Dbac_2547  acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR:  acetyltransferase
YP_004775056.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: bsa:Bacsa_2765 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004775057.1	PFAM: DUF218 domain; COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: mtt:Ftrac_3275 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Membrane protein
YP_004775058.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bhl:Bache_2165 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004775059.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fjo:Fjoh_0337 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004775060.1	PFAM: Glycosyl transferase 4; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: shg:Sph21_1832 glycosyl transferase 4; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyltransferase
YP_004775061.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ran:Riean_0739 DegT/DnrJ/eryc1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: General glycosylation pathway protein
YP_004775062.1	PFAM: Bacterial sugar transferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: swd:Swoo_1664 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase
YP_004775063.1	TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451:IPR020019; KEGG: mtt:Ftrac_0566 sugar O-acyltransferase, sialic acid O-acetyltransferase neud family; SPTR:  uncharacterized protein; TIGRFAM: Sialic acid O-acyltransferase, NeuD
YP_004775064.1	PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: shg:Sph21_1834 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD
YP_004775065.1	PFAM: Polysaccharide biosynthesis protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: mtt:Ftrac_3480 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Cap5D protein
YP_004775066.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: dfe:Dfer_3790 anthranilate synthase; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; SPTR: Anthranilate synthase component I
YP_004775067.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991:IPR006221; KEGG: mtt:Ftrac_1043 anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Anthranilate synthase component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase
YP_004775068.1	PFAM: Glycosyl transferase, a/b domain; Glycosyl transferase, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: rbi:RB2501_02205 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase
YP_004775069.1	PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: psn:Pedsa_2854 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase
YP_004775070.1	PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: cpi:Cpin_1826 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; manually curated
YP_004775071.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain; InterPro IPR001926:IPR006654; KEGG: gfo:GFO_2673 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; SPTR: Tryptophan synthase beta chain; TIGRFAM: Tryptophan synthase, beta chain
YP_004775072.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; COGs: COG0159 Tryptophan synthase alpha chain; HAMAP: Tryptophan synthase, alpha chain; InterPro IPR002028; KEGG: dfe:Dfer_3798 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain
YP_004775073.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006268; KEGG: mtt:Ftrac_1037 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2
YP_004775074.1	COGs: COG4270 membrane protein; KEGG: cly:Celly_0974 membrane protein; SPTR: Membrane protein
YP_004775075.1	PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: zpr:ZPR_0736 hypothetical protein; PFAM: Cyclic nucleotide-binding; SPTR: Protein containing cyclic nucleotide-binding domain
YP_004775076.1	PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form; COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: mtt:Ftrac_1424 phenylalanine 4-hydroxylase; PFAM: Aromatic amino acid hydroxylase, C-terminal; SPTR: Phenylalanine-4-hydroxylase
YP_004775077.1	PFAM: Domain of unknown function (DUF303); Calcineurin-like phosphoesterase; InterPro IPR005181:IPR004843; KEGG: agr:AGROH133_04636 metallophosphoesterase; PFAM: Protein of unknown function DUF303, acetylesterase ; Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004775078.1	SPTR:  uncharacterized protein
YP_004775079.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594:IPR013506:IPR006171:IPR001241; KEGG: mtt:Ftrac_0643 DNA topoisomerase type IIA subunit b region 2 domain protein; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR:  DNA topoisomerase IV, B subunit
YP_004775080.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: mtt:Ftrac_0640 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA topoisomerase 4 subunit A
YP_004775081.1	PFAM: SpoU rRNA Methylase; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: ter:Tery_2249 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: tRNA guanosine-2'-O-methyltransferase
YP_004775082.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775083.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR004095:IPR012947:IPR002314:IPR004154:IPR 002320; KEGG: mtt:Ftrac_0510 ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SPTR: Threonine--tRNA ligase; TIGRFAM: Threonyl-tRNA synthetase, class IIa
YP_004775084.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; COGs: COG0290 Translation initiation factor 3 (IF-3); HAMAP: Translation initiation factor IF-3; InterPro IPR019814:IPR019815:IPR001288; KEGG: mtt:Ftrac_0509 bacterial translation initiation factor 3 (bif-3); PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3
YP_004775085.1	PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; HAMAP: Ribosomal protein L35; InterPro IPR001706; KEGG: mtt:Ftrac_0508 LSU ribosomal protein l35p; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35
YP_004775086.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: wvi:Weevi_1268 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20
YP_004775087.1	KEGG: mtt:Ftrac_0683 hypothetical protein; SPTR:  uncharacterized protein
YP_004775088.1	PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: mtt:Ftrac_0213 permease yjgp/yjgq family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Membrane protein
YP_004775089.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589:IPR005290; KEGG: mtt:Ftrac_0214 SSU ribosomal protein s15p; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type
YP_004775090.1	PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease, domain 1; 3' exoribonuclease, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087; KEGG: chu:CHU_1786 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase
YP_004775091.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284; KEGG: mtt:Ftrac_0216 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70
YP_004775092.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR005982; KEGG: lby:Lbys_1281 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin-disulfide reductase; TIGRFAM: Thioredoxin reductase
YP_004775093.1	PFAM: Peptidase M23; LysM domain; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047:IPR018392:IPR002482; KEGG: chu:CHU_1777 M24/M37 family peptidase; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidase, M23/M37 family
YP_004775094.1	PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: bacillithiol biosynthesis deacetylase BshB1; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: mtt:Ftrac_0218 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: GlcNAc-PI de-N-acetylase
YP_004775096.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; COGs: COG0259 Pyridoxamine-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; InterPro IPR000659:IPR011576:IPR019576; KEGG: bte:BTH_I0717 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: Pyridoxamine 5'-phosphate oxidase
YP_004775097.1	PFAM: Uncharacterized ACR, COG1678; COGs: COG1678  transcriptional regulator protein; InterPro IPR003774; KEGG: mtt:Ftrac_0222 hypothetical protein; PFAM: Protein of unknown function DUF179; SPTR:  transcriptional regulator
YP_004775098.1	PFAM: Domain of Unknown Function (DUF349); InterPro IPR007139; KEGG: mtt:Ftrac_0223 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR:  uncharacterized protein
YP_004775099.1	KEGG: hypothetical protein
YP_004775101.1	KEGG: bhl:Bache_0306 hypothetical protein; SPTR:  uncharacterized protein
YP_004775102.1	KEGG: pgi:PG0870 hypothetical protein; SPTR:  uncharacterized protein
YP_004775104.1	PFAM: D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain; COGs: COG3378 ATPase; InterPro IPR014818:IPR006500; KEGG: sli:Slin_3095 P4 family phage/plasmid primase; PFAM: Phage/plasmid primase, P4, C-terminal; SPTR: Phage/plasmid primase, P4 family; TIGRFAM: DNA primase, phage/plasmid
YP_004775105.1	TIGRFAM: DNA binding domain, excisionase; InterPro IPR000551; KEGG: bsa:Bacsa_0523 DNA binding domain-containing protein, excisionase; PFAM: HTH transcriptional regulator, MerR; SPTR: DNA binding domain protein, excisionase
YP_004775106.1	KEGG: cpb:Cphamn1_0677 hypothetical protein; SPTR:  uncharacterized protein
YP_004775107.1	PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_03935 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase
YP_004775110.1	KEGG: rba:RB3006 sialidase; SPTR: Probable sialidase
YP_004775112.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789:IPR018060; KEGG: fjo:Fjoh_3120 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Helix-turn-helix, AraC domain; SPTR:  uncharacterized protein
YP_004775113.1	PFAM: Phage Tail Collar Domain; InterPro IPR011083; KEGG: Tail Collar domain-containing protein; PFAM: Phage Tail Collar; SPTR:  phage protein
YP_004775114.1	InterPro IPR012680; KEGG: Fibronectin type III domain-containing protein; PFAM: Laminin G, subdomain 2; SPTR: Fibronectin type III domain protein
YP_004775115.1	KEGG: Fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein
YP_004775117.1	PFAM: Glycosyl hydrolases family 28; KEGG: dfe:Dfer_0681 hypothetical protein; SPTR:  uncharacterized protein
YP_004775119.1	PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: scl:sce6459  amidohydrolase; PFAM: Amidohydrolase 1; SPTR:  amidohydrolase
YP_004775120.1	PFAM: SNARE associated Golgi protein; COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: zpr:ZPR_2562 SNARE associated Golgi protein-like protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-like protein
YP_004775121.1	PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: fjo:Fjoh_0182 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein
YP_004775124.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: cpi:Cpin_5361 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: Outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT
YP_004775125.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: bvu:BVU_3592 cation/multidrug efflux pump; PFAM: Acriflavin resistance protein; SPTR: HAE1 efflux family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1
YP_004775126.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: bvu:BVU_3591 multidrug resistance protein MexA; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004775127.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR001734:IPR019900; KEGG: cao:Celal_0453 sss sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup
YP_004775128.1	PFAM: Family of unknown function (DUF706); InterPro IPR007828; KEGG: cao:Celal_0454 inositol oxygenase; PFAM: Protein of unknown function DUF706; SPTR: Inositol oxygenase
YP_004775129.1	PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; InterPro IPR004433:IPR012001; KEGG: mtt:Ftrac_3778 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; SPTR:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexe ne-1-carboxylatesynthase; TIGRFAM: Menaquinone biosynthesis protein MenD
YP_004775130.1	PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; COGs: COG1169 Isochorismate synthase; InterPro IPR015890; KEGG: mtt:Ftrac_1129 chorismate binding protein; PFAM: Chorismate binding, C-terminal; SPTR:  isochorismate synthase
YP_004775131.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683:IPR003736; KEGG: mtt:Ftrac_1128 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase; TIGRFAM: Phenylacetic acid degradation-related protein
YP_004775132.1	PFAM: Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: mtt:Ftrac_1127 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR:  phosphoglycerate mutase
YP_004775133.1	SPTR:  uncharacterized protein
YP_004775134.1	PFAM:  zinc ribbon domain; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: mtt:Ftrac_3578 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR:  zinc ribbon domain protein
YP_004775135.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: dfe:Dfer_5147 protein of unknown function DUF34; PFAM: NGG1p interacting factor 3, NIF3; SPTR: NIF3-related protein; TIGRFAM: NGG1p interacting factor 3, NIF3
YP_004775136.1	PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: cpi:Cpin_3670 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase
YP_004775137.1	KEGG: mtt:Ftrac_3581 hypothetical protein; SPTR:  uncharacterized protein
YP_004775138.1	PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; InterPro IPR010386; KEGG: mtt:Ftrac_3582 tRNA-hydroxylase; PFAM: tRNA--hydroxylase; SPTR: tRNA-(MS[2]IO[6]A)-hydroxylase
YP_004775139.1	PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: mtt:Ftrac_3664 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  ABC transporter, permease
YP_004775140.1	PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: psn:Pedsa_0688 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; Glucose-methanol-choline oxidoreductase, N-terminal; SPTR: Oxidoreductase, GMC family
YP_004775141.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01931  sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004775143.1	COGs: COG5616 integral membrane protein; InterPro IPR001440:IPR019734:IPR018060; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Transcriptional regulator, AraC family
YP_004775144.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: ppn:Palpr_0909 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein
YP_004775145.1	PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004775146.1	KEGG: lby:Lbys_2735 hypothetical protein; SPTR:  uncharacterized protein
YP_004775147.1	PFAM: Response regulator receiver domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789; KEGG: mtt:Ftrac_0265 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family
YP_004775148.1	PFAM: BNR/Asp-box repeat; KEGG: chu:CHU_1335 endoglucanase-like protein; SPTR: Outer membrane protein
YP_004775150.1	KEGG: ttr:Tter_1124 transcriptional regulator, XRE family; SPTR: Diguanylate cyclase
YP_004775151.1	KEGG: pbs:Plabr_3103 hypothetical protein; SPTR:  uncharacterized protein
YP_004775152.1	PFAM: Histidine kinase; COGs: COG3920 Signal transduction histidine kinase; InterPro IPR001440:IPR003594:IPR019734; KEGG: mtt:Ftrac_0266 signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Tetratricopeptide TPR-1; SPTR: Serine/threonine protein kinases
YP_004775156.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611:IPR011877; KEGG: cyc:PCC7424_3869 ribokinase; PFAM: Carbohydrate/purine kinase; SPTR: Ribokinase; TIGRFAM: Ribokinase, bacterial
YP_004775157.1	PFAM: Inosine-uridine preferring nucleoside hydrolase; COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: bpb:bpr_I0724 inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine-uridine preferring nucleoside hydrolase
YP_004775158.1	PFAM: Fatty acid elongase 3-ketoacyl-CoA synthase 1; KEGG:  integral membrane protein; sugar permease; SPTR: Sugar transport family protein
YP_004775159.1	InterPro IPR005560; KEGG: gfo:GFO_2936 hypothetical protein; SPTR:  uncharacterized protein
YP_004775160.1	COGs: COG2367 Beta-lactamase class A; KEGG: ttm:Tthe_2446 beta-lactamase; SPTR: Beta-lactamase
YP_004775161.1	PFAM: AbgT  transporter family; TIGRFAM: p-Aminobenzoyl-glutamate transporter family; COGs: COG2978  p-aminobenzoyl-glutamate transporter; InterPro IPR004697; KEGG: saz:Sama_3423 transporter; PFAM: AbgT  transporter; SPTR: Transporter; manually curated
YP_004775162.1	PFAM: Rhodanese-like domain; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fjo:Fjoh_2623 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein
YP_004775163.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR011284; KEGG: mtt:Ftrac_3320 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_004775164.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099:IPR006258; KEGG: mtt:Ftrac_3319 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase
YP_004775165.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR007630:IPR014284; KEGG: mtt:Ftrac_3318 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-E factor heat shock and oxidative stress; TIGRFAM: RNA polymerase sigma-70
YP_004775166.1	PFAM: Anti-sigma-K factor rskA; InterPro IPR018764; KEGG: mtt:Ftrac_3317 anti-sigma K factor rska; PFAM: Anti-sigma K factor RskA; SPTR:  uncharacterized protein
YP_004775167.1	PFAM: Protein of unknown function (DUF2721); KEGG: psn:Pedsa_1226 hypothetical protein; SPTR: Cellulose-binding protein II
YP_004775168.1	PFAM: Beta-eliminating lyase; COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: dfe:Dfer_4745 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; SPTR: Low-specificity L-threonine aldolase
YP_004775169.1	PFAM: MgsA AAA+ ATPase C terminal; ATPase associated with various cellular activities (AAA); COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: cpi:Cpin_0165 ATPase AAA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family
YP_004775170.1	SPTR:  outer membrane insertion C-signal
YP_004775171.1	PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: mtt:Ftrac_0879 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol-disulfide oxidoreductase ResA
YP_004775173.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_10626 cation efflux system protein; SPTR: Cation efflux system protein; TIGRFAM: Secretion protein HlyD
YP_004775174.1	PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR001036:IPR004763; KEGG: fbc:FB2170_10631  transport-related membrane protein; PFAM: Acriflavin resistance protein; SPTR:  transport-related membrane protein; TIGRFAM: Heavy metal efflux pump CzcA
YP_004775175.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: fjo:Fjoh_2879 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Periplasmic sensor signal transduction histidine kinase
YP_004775176.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: zpr:ZPR_1917 two component transcriptional regulator winged helix family protein; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: DNA-binding response regulator
YP_004775177.1	PFAM: Methyltransferase domain; KEGG: npu:Npun_R4833 methyltransferase type 11; SPTR:  uncharacterized protein
YP_004775178.1	TIGRFAM: gamma-glutamyl phosphate reductase; COGs: COG0014 Gamma-glutamyl phosphate reductase; HAMAP: Glutamate-5-semialdehyde dehydrogenase; InterPro IPR012134:IPR000965; KEGG: cts:Ctha_1455 gamma-glutamyl phosphate reductase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR
YP_004775179.1	PFAM: Amino acid kinase; PUA domain; TIGRFAM: glutamate 5-kinase; COGs: COG0263 Glutamate 5-kinase; HAMAP: Glutamate 5-kinase; InterPro IPR001048:IPR002478:IPR005715; KEGG: ppn:Palpr_1703 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; SPTR: Glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase, ProB-related
YP_004775180.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: mtt:Ftrac_3788 amino acid carrier protein; PFAM: Sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: Sodium:alanine symporter
YP_004775181.1	PFAM: Glycerate kinase; TIGRFAM: glycerate kinase; COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: shg:Sph21_4632 glycerate kinase; PFAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: Glycerate kinase
YP_004775182.1	KEGG: cts:Ctha_0375 hypothetical protein; SPTR:  uncharacterized protein
YP_004775183.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: cli:Clim_1083 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase
YP_004775184.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; InterPro IPR001041; KEGG: sli:Slin_3269 ferredoxin; PFAM: Ferredoxin; SPTR: Ferredoxin, 2Fe-2S
YP_004775185.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase; InterPro IPR013027; KEGG: sli:Slin_3270 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulfide oxidoreductase
YP_004775186.1	PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: shg:Sph21_2970 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family
YP_004775187.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: rbi:RB2501_09760 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase
YP_004775188.1	PFAM: Cytochrome c; KEGG: phe:Phep_2958 cytochrome c family protein; SPTR: Cytochrome c-related protein
YP_004775189.1	PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: cte:CT0412 iron(III) ABC transporter, ATP-binding protein, PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Iron compound ABC transporter, ATP-binding protein
YP_004775190.1	PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cly:Celly_0155 ABC-type transporter, integral membrane subunit; PFAM: Bacterial transport system permease; SPTR: Iron compound ABC transporter, permease
YP_004775191.1	PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; KEGG: periplasmic binding protein; SPTR:  iron(III) ABC transporter, periplasmic iron-binding protein
YP_004775192.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_3390 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  TonB-dependent receptor
YP_004775193.1	KEGG: cat:CA2559_12503  surface layer protein; SPTR:  uncharacterized protein
YP_004775194.1	KEGG: dfe:Dfer_3662 hypothetical protein; SPTR:  uncharacterized protein
YP_004775195.1	KEGG: sli:Slin_5493 hypothetical protein; SPTR: LVIVD repeat superfamily
YP_004775196.1	PFAM: Nucleotidyltransferase substrate binding protein like; InterPro IPR010235; KEGG: mtt:Ftrac_1260 nucleotidyltransferase substrate binding protein, hi0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; SPTR:  toxin-antitoxin system, antitoxin component
YP_004775197.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: mtt:Ftrac_3235 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC
YP_004775198.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_0629 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase
YP_004775199.1	KEGG: mtt:Ftrac_0628 hypothetical protein; SPTR:  uncharacterized protein
YP_004775200.1	PFAM: Stage II sporulation protein E (SpoIIE); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: mtt:Ftrac_0623 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Sigma factor regulation protein
YP_004775201.1	PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: phe:Phep_0661 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase
YP_004775202.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: chu:CHU_2174 polysaccharide-forming b-glycosyltransferase-like protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2
YP_004775203.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Deoxyribonuclease, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote
YP_004775204.1	PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034:IPR006033; KEGG: mtt:Ftrac_0619 asparaginase; PFAM: Asparaginase/glutaminase; SPTR: L-asparaginase; TIGRFAM: L-asparaginase, type I
YP_004775206.1	PFAM: Virulence-associated protein E; COGs: COG5545 P-loop ATPase and inactivated derivatives; InterPro IPR007936; KEGG: fps:FP0491 hypothetical protein; PFAM: Virulence-associated E; SPTR:  uncharacterized protein
YP_004775207.1	KEGG: bfs:BF3283  transposon-related/mobilisation protein; SPTR:  uncharacterized protein
YP_004775208.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: phe:Phep_1791 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase
YP_004775209.1	PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: chu:CHU_1181 response regulator, positive activator of UhpT transcription; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family
YP_004775212.1	KEGG: chu:CHU_3210 hypothetical protein; SPTR:  uncharacterized protein
YP_004775213.1	KEGG: chu:CHU_3209 hypothetical protein; SPTR:  uncharacterized protein
YP_004775214.1	PFAM: Leucine Rich Repeat; PKD domain; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR001611:IPR000601:IPR003591; KEGG: tps:THAPSDRAFT_262217 hypothetical protein; PFAM: PKD; Leucine-rich repeat; SPTR: Disease resistance protein
YP_004775215.1	PFAM: Leucine Rich Repeat; Fibronectin type III domain; COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR003961:IPR001611:IPR006530:IPR003591; KEGG: cpi:Cpin_4789 hypothetical protein; PFAM: Fibronectin, type III; Leucine-rich repeat; YD repeat; SMART: Fibronectin, type III; Leucine-rich repeat, typical subtype; SPTR: YD repeat protein; TIGRFAM: RHS repeat-associated core domain-containing protein; YD repeat
YP_004775219.1	PFAM: Bacterial mobilisation protein (MobC); Ribbon-helix-helix protein, copG family; SPTR: Mobilization protein
YP_004775220.1	PFAM: Relaxase/Mobilisation nuclease domain; InterPro IPR005094; KEGG: bsa:Bacsa_3688 relaxase/mobilization nuclease; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR:  uncharacterized protein
YP_004775221.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; KEGG: bfs:pBF9343.15  ParA-related protein; SPTR:  uncharacterized protein
YP_004775224.1	KEGG: bfs:pBF9343.47c  plasmid transfer protein; SPTR:  uncharacterized protein
YP_004775225.1	KEGG: bfs:pBF9343.47c  plasmid transfer protein; SPTR: Conserved transmembrane protein found in conjugate transposon TraE
YP_004775226.1	KEGG: bfr:BFp0009 hypothetical protein; SPTR:  uncharacterized protein
YP_004775227.1	PFAM: CagE, TrbE, VirB family, component of type IV transporter system; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: bfr:BF2797 hypothetical protein; SPTR:  uncharacterized protein; TIGRFAM: Bacteroides conjugation system ATPase, TraG family
YP_004775228.1	KEGG: bfr:BFp0011 hypothetical protein; SPTR:  uncharacterized protein
YP_004775229.1	KEGG: bfs:pBF9343.44c  plasmid transfer protein; SPTR:  uncharacterized protein
YP_004775230.1	SPTR:  uncharacterized protein
YP_004775231.1	SPTR:  uncharacterized protein
YP_004775232.1	KEGG: bfs:pBF9343.42c  plasmid transfer protein; SPTR: TraJ family protein conjugative transposon
YP_004775233.1	TIGRFAM: Bacteroides conjugative transposon TraK protein; KEGG: bsa:Bacsa_3656 conjugative transposon TraK protein; SPTR:  plasmid transfer protein; TIGRFAM: Bacteroides conjugative transposon TraK protein
YP_004775234.1	SPTR:  uncharacterized protein
YP_004775235.1	PFAM: Protein of unknown function (DUF3714); TIGRFAM: Bacteroides conjugative transposon TraM protein; KEGG: bsa:Bacsa_3658 conjugative transposon TraM protein; SPTR: Conserved protein found in conjugate transposon TraM; TIGRFAM: Bacteroides conjugative transposon TraM protein
YP_004775236.1	TIGRFAM: Bacteroides conjugative transposon TraN protein; KEGG: bsa:Bacsa_3439 conjugative transposon TraN protein; SPTR: Bacteroides conjugative transposon TraN protein; TIGRFAM: Bacteroides conjugative transposon TraN protein
YP_004775237.1	PFAM: Type IV secretion-system coupling protein DNA-binding domain; KEGG: bsa:Bacsa_3678  plasmid transfer protein; SPTR:  plasmid transfer protein
YP_004775239.1	PFAM: Domain of unknown function (DUF1738); COGs: COG4227 Antirestriction protein; InterPro IPR013610; KEGG: adn:Alide_4424 hypothetical protein; PFAM: Domain of unknown function DUF1738; SPTR:  uncharacterized protein
YP_004775240.1	KEGG: bsa:Bacsa_3668 hypothetical protein; SPTR:  uncharacterized protein
YP_004775241.1	SPTR:  uncharacterized protein
YP_004775243.1	SPTR:  uncharacterized protein
YP_004775244.1	PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: sli:Slin_0523 DNA repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like
YP_004775246.1	KEGG: shg:Sph21_1217 hypothetical protein; SPTR:  uncharacterized protein
YP_004775247.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pdi:BDI_3256  transposase; PFAM: Transposase, IS4-like; SPTR: ISPg3, transposase
YP_004775248.1	KEGG: hypothetical protein; SPTR: GUN4 domain protein
YP_004775249.1	PFAM: Archaeal ATPase; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775251.1	KEGG: shg:Sph21_1217 hypothetical protein; SPTR:  uncharacterized protein
YP_004775253.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775254.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein
YP_004775255.1	PFAM: Preprotein translocase subunit SecB; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775256.1	PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR004546; KEGG: sua:Saut_1346 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; SPTR: Type I restriction-modification system, M subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit
YP_004775257.1	PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: hse:Hsero_4560 type I site-specific deoxyribonuclease specificity subunit; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Type I restriction enzyme, S subunit
YP_004775259.1	PFAM: Abi-like protein; COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: chu:CHU_3671 hypothetical protein; PFAM: Abortive infection bacteriophage resistance related; SPTR:  uncharacterized protein
YP_004775260.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type I restriction and modification enzyme - subunit R C terminal; Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR007409:IPR006935:IPR014001:IPR004473; KEGG: dfe:Dfer_5242 type I site-specific deoxyribonuclease, HsdR family; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: Type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit
YP_004775262.1	PFAM: KAP family P-loop domain; InterPro IPR011646; KEGG: fba:FIC_00908 hypothetical protein; PFAM: KAP P-loop; SPTR:  uncharacterized protein
YP_004775264.1	PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: bsu:BSU20490 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR:  uncharacterized protein
YP_004775267.1	KEGG: bid:Bind_1439 hypothetical protein; SPTR:  uncharacterized protein
YP_004775270.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase
YP_004775272.1	SPTR:  uncharacterized protein
YP_004775273.1	KEGG: sli:Slin_4859 hypothetical protein; SPTR:  uncharacterized protein
YP_004775274.1	KEGG: amt:Amet_0199 hypothetical protein; SPTR:  uncharacterized protein
YP_004775275.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2188); KEGG: maq:Maqu_1259 hypothetical protein; SPTR:  uncharacterized protein
YP_004775276.1	PFAM: Helix-turn-helix; Domain of unknown function (DUF955); COGs: COG2856 Zn peptidase; InterPro IPR001387:IPR010359; KEGG: psn:Pedsa_1879 protein of unknown function DUF955; PFAM: Protein of unknown function DUF955; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein
YP_004775277.1	KEGG: psn:Pedsa_1878 hypothetical protein; SPTR:  uncharacterized protein
YP_004775279.1	KEGG: bhl:Bache_1421 hypothetical protein; SPTR:  uncharacterized protein
YP_004775280.1	PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: shg:Sph21_2466 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family
YP_004775281.1	PFAM: TonB dependent receptor; InterPro IPR000531; KEGG: dfe:Dfer_2379 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004775282.1	PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: dfe:Dfer_2378 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR:  uncharacterized protein
YP_004775283.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: bte:BTH_II1676 4-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: 4-phosphopantetheinyl transferase
YP_004775288.1	PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: pgi:PG0838 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Site-specific recombinase, phage integrase
YP_004775290.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; KEGG: bth:BT_3673 TonB; SPTR: TonB
YP_004775292.1	PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: sli:Slin_1591 glucose/sorbosone dehydrogenase; SPTR: Protein up-regulated by thyroid hormone- PQQ-dependent glucose dehydrogenase
YP_004775293.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: mab:MAB_4696c methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase
YP_004775294.1	PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: mtt:Ftrac_0618 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family protein
YP_004775295.1	KEGG: mtt:Ftrac_0617 hypothetical protein; SPTR:  uncharacterized protein
YP_004775296.1	PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: mtt:Ftrac_0616 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Membrane protein
YP_004775297.1	PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: mtt:Ftrac_0615 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Membrane protein
YP_004775298.1	PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: mtt:Ftrac_1341 rhodanese domain protein; SPTR: Metallo-beta-lactamase superfamily protein
YP_004775299.1	PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: dfe:Dfer_3116 protein of unknown function DUF395 YeeE/YedE; PFAM: Protein of unknown function DUF395, YeeE/YedE; SPTR: YeeE/YedE family protein
YP_004775300.1	PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: lby:Lbys_0966 hypothetical protein; PFAM: Protein of unknown function DUF395, YeeE/YedE; SPTR: Transporter component
YP_004775301.1	PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395:IPR011890; KEGG: mtt:Ftrac_0067 chromosome segregation protein smc; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR:  SMC family protein; TIGRFAM: Chromosome segregation protein SMC
YP_004775302.1	PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: tte:TTE0840 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR:  uncharacterized protein
YP_004775303.1	PFAM: AhpC/TSA family; KEGG: abi:Aboo_0883 peroxiredoxin; SPTR: Probable peroxiredoxin 1
YP_004775304.1	KEGG: mtt:Ftrac_0070 hypothetical protein; SPTR:  uncharacterized protein
YP_004775305.1	PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: phe:Phep_1689 natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein; SPTR: Natural resistance-associated macrophage protein
YP_004775306.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: phe:Phep_1690 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase
YP_004775307.1	KEGG: gym:GYMC10_0510 dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase
YP_004775308.1	PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal; KEGG: bth:BT_3608 hypothetical protein; SPTR: Sialidase
YP_004775309.1	KEGG: shg:Sph21_0105 hypothetical protein; SPTR:  uncharacterized protein
YP_004775310.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: sli:Slin_0438 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004775311.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: sli:Slin_0602 hypothetical protein; SPTR:  uncharacterized protein
YP_004775312.1	PFAM: Trehalose utilisation; KEGG: psl:Psta_2160 NHL repeat containing protein; SPTR:  uncharacterized protein
YP_004775313.1	KEGG: ach:Achl_0457 hypothetical protein; SPTR:  uncharacterized protein
YP_004775314.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR006638:IPR005839:IPR 006467; KEGG: mtt:Ftrac_0063 MiaB-like tRNA modifying enzyme; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase
YP_004775316.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: mtt:Ftrac_0061 glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic region; SPTR: Glutamine synthetase
YP_004775318.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: gfo:GFO_1709 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Zinc-type alcohol dehydrogenase
YP_004775319.1	KEGG: transglutaminase domain-containing protein; SPTR:  uncharacterized protein
YP_004775320.1	PFAM: Transglutaminase-like superfamily; KEGG: cpi:Cpin_4000 transglutaminase domain protein; SPTR:  uncharacterized protein
YP_004775321.1	PFAM: Malate/L-lactate dehydrogenase; COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: psn:Pedsa_2698 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; SPTR: 2,3-diketo-L-gulonate reductase
YP_004775322.1	PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain; InterPro IPR013737:IPR008902; KEGG: sli:Slin_1249 alpha-L-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; SPTR: Alpha-L-rhamnosidase
YP_004775323.1	PFAM: Pyruvate kinase, barrel domain; COGs: COG0469 Pyruvate kinase; InterPro IPR015793; KEGG: Pyruvate kinase; PFAM: Pyruvate kinase, barrel; SPTR: Pyruvate kinase
YP_004775324.1	PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: shg:Sph21_3587 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Metallo-beta-lactamase
YP_004775325.1	PFAM: FeoA domain; InterPro IPR007167; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: Ferrous iron transport protein B
YP_004775326.1	PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR003373:IPR002917:IPR011619:IPR 011642:IPR011640; KEGG: shg:Sph21_2200 ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein
YP_004775327.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: zpr:ZPR_4344 multidrug resistance protein, FusA/NodT family protein; PFAM: Outer membrane efflux protein; SPTR: Multidrug resistance protein, FusA/NodT family protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT
YP_004775328.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: lby:Lbys_1748 transporter, hydrophobe/amphiphile efflux-1 (hae1) family; PFAM: Acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1
YP_004775329.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: lby:Lbys_1747 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004775330.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775331.1	KEGG: zpr:ZPR_1596 hypothetical protein; SPTR: Membrane protein
YP_004775332.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: cpi:Cpin_0328 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004775333.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR016048; KEGG: phe:Phep_2368 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Bacterial luciferase; TIGRFAM: Luciferase oxidoreductase, group 1
YP_004775334.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: mtt:Ftrac_1385 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; SPTR: NADH-dependent flavin oxidoreductase, Oye family
YP_004775335.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918; KEGG: osp:Odosp_0565 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; SPTR: Phosphoribosylformylglycinamidine synthase
YP_004775336.1	PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: mtt:Ftrac_0547 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR:  transcriptional regulator, TetR family
YP_004775337.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: shg:Sph21_0683 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase domain protein
YP_004775338.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_0546 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR:  outer membrane protein
YP_004775339.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: mtt:Ftrac_0545 efflux transporter, rnd family, mfp subunit; PFAM: Biotin/lipoyl attachment; SPTR: Cation efflux system protein/acriflavin resistance protein B family protein; TIGRFAM: Secretion protein HlyD
YP_004775340.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_0544 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Cation/multidrug efflux pump
YP_004775341.1	PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: fjo:Fjoh_1120 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; SPTR: L-ribulose-5-phosphate 4-epimerase
YP_004775342.1	PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; COGs: COG2160 L-arabinose isomerase; HAMAP: L-arabinose isomerase; InterPro IPR003762; KEGG: cpi:Cpin_3996 L-arabinose isomerase; PFAM: L-arabinose isomerase; SPTR: L-arabinose isomerase
YP_004775343.1	InterPro IPR006016; KEGG: ran:Riean_0358 hypothetical protein; PFAM: UspA; SPTR:  uncharacterized protein
YP_004775344.1	PFAM: High potential iron-sulfur protein; KEGG: phe:Phep_0333 hypothetical protein; SPTR: High-potential iron-sulfur protein
YP_004775345.1	TIGRFAM:  membrane-bound dehydrogenase domain; InterPro IPR013428; KEGG: phe:Phep_0332 membrane-bound dehydrogenase domain-containing protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase
YP_004775346.1	PFAM: Dienelactone hydrolase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR008391; KEGG: phe:Phep_0353 signal peptide; PFAM: Acetyl xylan esterase; SPTR: Signal peptide
YP_004775347.1	PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; InterPro IPR004131; KEGG: mtt:Ftrac_0768 v-type h(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; SPTR:  K(+)-stimulated pyrophosphate-energized sodium pump; TIGRFAM: Inorganic H+ pyrophosphatase
YP_004775348.1	PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: phe:Phep_1245 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Cell wall hydrolase/autolysin
YP_004775349.1	PFAM: Hpt domain; KEGG: sli:Slin_3142 multi-sensor hybrid histidine kinase; SPTR: Multi-sensor hybrid histidine kinase
YP_004775350.1	PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641:IPR018974:IPR003029; KEGG: mtt:Ftrac_0657 tex-like protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SPTR: S1 RNA binding domain protein
YP_004775352.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: mtt:Ftrac_3516 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein
YP_004775353.1	KEGG: dfe:Dfer_1214 hypothetical protein; SPTR:  uncharacterized protein
YP_004775354.1	PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3751 proline hydroxylase; InterPro IPR006620:IPR005123; KEGG: ppf:Pput_5066 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase
YP_004775355.1	KEGG: drt:Dret_0940 hypothetical protein; SPTR:  uncharacterized protein
YP_004775356.1	PFAM: Anticodon-binding domain; tRNA synthetases class I (M); tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR002304:IPR004495:IPR015413:IPR002547; KEGG: cly:Celly_1732 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal
YP_004775357.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03955 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A
YP_004775358.1	PFAM: Glycosyl hydrolase 20, catalytic domain; Glycosyl hydrolase 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: shg:Sph21_0646 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like; SPTR: Beta-N-acetylhexosaminidase
YP_004775359.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_04350 hypothetical protein; PFAM: Beta-lactamase-related; SPTR:  uncharacterized protein
YP_004775361.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: psn:Pedsa_0760 cation diffusion facilitator family transporter; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein
YP_004775362.1	PFAM: Peptidase M3; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: mtt:Ftrac_2370 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; SPTR: Peptidyl-dipeptidase Dcp
YP_004775363.1	KEGG: bcx:BCA_2807 hypothetical protein; SPTR:  uncharacterized protein
YP_004775364.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin
YP_004775365.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775366.1	PFAM: Peptidase M48; COGs: COG4783  Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: mtt:Ftrac_0977 peptidase M48 ste24p; PFAM: Peptidase M48, Ste24p; SPTR: Peptidase, M48 family
YP_004775367.1	PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: mtt:Ftrac_0737 glycoside hydrolase 31; PFAM: Glycoside hydrolase, family 31; SPTR: Glycoside hydrolase 31
YP_004775369.1	PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: mtt:Ftrac_0568 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR:  Zn-dependent aminopeptidase
YP_004775371.1	PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: mtt:Ftrac_1001 hypothetical protein; SPTR: Membrane protein
YP_004775372.1	PFAM: Endonuclease/Exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: chu:CHU_3419 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004775373.1	PFAM: Protein of unknown function (DUF2911); KEGG: fbc:FB2170_12391 hypothetical protein; SPTR:  uncharacterized protein
YP_004775374.1	PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: mtt:Ftrac_1055 peptidase S45 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; SPTR:  penicillin G acylase
YP_004775375.1	KEGG: mtt:Ftrac_1054 hypothetical protein; SPTR:  uncharacterized protein
YP_004775376.1	PFAM: Trehalose-phosphatase; Glycosyltransferase 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: mtt:Ftrac_2520 trehalose 6-phosphatase; trehalose 6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; SPTR: Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_004775377.1	PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: shg:Sph21_1028 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase
YP_004775378.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR000627:IPR012910:IPR000531; KEGG: dfe:Dfer_1683 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Intradiol ring-cleavage dioxygenase, C-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004775379.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1684 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775380.1	PFAM: Heparinase II/III-like protein; KEGG: heparinase II/III family protein; SPTR:  uncharacterized protein
YP_004775381.1	PFAM: Polysaccharide lyase 8, N terminal alpha-helical domain; Polysaccharide lyase 8, super-sandwich domain; Polysaccharide lyase 8, C-terminal beta-sandwich domain; InterPro IPR012970:IPR003159:IPR004103; KEGG: phe:Phep_0786 polysaccharide lyase 8; PFAM: Polysaccharide lyase 8, central domain; Polysaccharide lyase 8, N-terminal alpha-helical; Polysaccharide lyase 8, C-terminal; SPTR:  uncharacterized protein
YP_004775382.1	KEGG: scb:SCAB_0601 hypothetical protein; SPTR:  uncharacterized protein
YP_004775383.1	PFAM: Heparinase II/III-like protein
YP_004775384.1	PFAM: Heparinase II/III-like protein; KEGG: sli:Slin_2452 hypothetical protein; SPTR:  uncharacterized protein
YP_004775385.1	COGs: COG3586 conserved hypothetical protein; KEGG: ter:Tery_3514 hypothetical protein; SPTR:  uncharacterized protein
YP_004775386.1	PFAM: Transposase IS116/IS110/IS902 family; Transposase; InterPro IPR003346; KEGG: hypothetical protein; PFAM: Transposase, IS116/IS110/IS902; SPTR:  uncharacterized protein
YP_004775387.1	KEGG: cat:CA2559_00310 hypothetical protein; SPTR:  uncharacterized protein
YP_004775388.1	InterPro IPR004843; KEGG: npu:Npun_BR095 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR:  uncharacterized protein
YP_004775389.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0326 Molecular chaperone HSP90 family; KEGG: zin:ZICARI_068  heat shock protein HSP90; SPTR: Chaperone protein htpG
YP_004775391.1	KEGG: fbc:FB2170_11041 hypothetical protein; SPTR:  uncharacterized protein
YP_004775394.1	PFAM: IS66 Orf2 like protein; InterPro IPR008878; KEGG: zpr:ZPR_3984 transposase orf1, IS66 family protein; PFAM: Transposase (), IS66 Orf2 like; SPTR: Transposase orf1, IS66 family protein
YP_004775395.1	PFAM: Transposase IS66 family; COGs: COG3436 Transposase and inactivated derivatives; InterPro IPR004291; KEGG: shg:Sph21_5072 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase
YP_004775397.1	SPTR:  uncharacterized protein
YP_004775399.1	KEGG: dfe:Dfer_0503 hypothetical protein; SPTR:  uncharacterized protein
YP_004775400.1	PFAM: Transposase DDE domain; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: osp:Odosp_3612 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family
YP_004775402.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: chu:CHU_3507 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR:  uncharacterized protein
YP_004775404.1	PFAM: Tetratricopeptide repeat; COGs: COG5616 integral membrane protein; InterPro IPR019734:IPR018060:IPR001440; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Transcriptional regulator, AraC family
YP_004775405.1	PFAM: SEC-C motif; Protein of unknown function (DUF1186); InterPro IPR004027; KEGG: zpr:ZPR_0299 hypothetical protein; PFAM: SEC-C motif; SPTR:  uncharacterized protein
YP_004775406.1	TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR006626; KEGG: ote:Oter_2913 hypothetical protein; SPTR:  secreted protein
YP_004775407.1	KEGG: bja:bll0863 hypothetical protein; SPTR: Bll0863 protein
YP_004775408.1	KEGG: aha:AHA_2030 hypothetical protein; SPTR:  uncharacterized protein
YP_004775409.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: gfo:GFO_0923 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR:  uncharacterized protein
YP_004775410.1	PFAM: Helix-turn-helix; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: gfo:GFO_0922 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Predicted transcription regulator containing helix turn helix domain
YP_004775411.1	PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0496 acid phosphatase; HAMAP: Multifunctional protein surE; InterPro IPR002828; KEGG: mtt:Ftrac_0928 stationary-phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase
YP_004775412.1	KEGG: mtt:Ftrac_0929 hypothetical protein; SPTR:  uncharacterized protein
YP_004775413.1	PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: GTP cyclohydrolase-2; InterPro IPR000422:IPR000926; KEGG: mtt:Ftrac_0930 GTP cyclohydrolase II; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis protein ribBA; TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II
YP_004775414.1	PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; COGs: COG0358 DNA primase; InterProIPR006295:IPR002694:IPR006154:IPR013264:IPR 006171; KEGG: mtt:Ftrac_0931 DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG
YP_004775415.1	PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; Anion-transporting ATPase; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR002744:IPR019591; KEGG: mtt:Ftrac_0932 ATPase-like, para/MinD; PFAM: ATPase-like, ParA/MinD; Protein of unknown function DUF59; SPTR: ATP-binding protein, Mrp/Nbp35 family
YP_004775416.1	PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: mtt:Ftrac_0933 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: NifU domain protein
YP_004775417.1	PFAM: Pregnancy-associated plasma protein-A; KEGG: mtt:Ftrac_0934 hypothetical protein; SPTR: Ulilysin
YP_004775418.1	PFAM: PASTA domain; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: mtt:Ftrac_0936 PASTA domain containing protein; PFAM: PASTA; SMART: PASTA; SPTR:  uncharacterized protein
YP_004775419.1	KEGG: mtt:Ftrac_0937 hypothetical protein; SPTR:  uncharacterized protein
YP_004775420.1	PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: dfe:Dfer_2923 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Type IV pilus assembly protein PilM
YP_004775421.1	PFAM: Peptidase M50; InterPro IPR008915; KEGG: mtt:Ftrac_1435 peptidase M50; PFAM: Peptidase M50; SPTR: Peptidase, M50 (S2P protease) family
YP_004775422.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006402:IPR005834; KEGG: dfe:Dfer_5618 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3
YP_004775423.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: dfe:Dfer_3216 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004775424.1	PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: dfe:Dfer_5089 carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: YjeF family protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal
YP_004775425.1	PFAM: Ribonuclease HII; COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: mtt:Ftrac_1360 RNAse HII; PFAM: Ribonuclease HII/HIII; SPTR: Ribonuclease HII
YP_004775426.1	PFAM: Mannosyl oligosaccharide glucosidase; KEGG: chu:CHU_2813 glucosidase; SPTR:  uncharacterized protein
YP_004775427.1	PFAM: Glycosyltransferase 28 C-terminal domain; TIGRFAM: conserved hypothetical protein; KEGG: dfe:Dfer_3660  glycosyltransferase; SPTR:  uncharacterized protein
YP_004775428.1	PFAM: Calcineurin-like phosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: mtt:Ftrac_1844 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Ser/Thr protein phosphatase
YP_004775429.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594; KEGG: mtt:Ftrac_1848 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Two-component system sensor histidine kinase
YP_004775430.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: mtt:Ftrac_1849 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Sigma-54 dependent DNA-binding response regulator SasR
YP_004775431.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: mtt:Ftrac_1850 peptidylprolyl isomerase fkbp-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004775432.1	KEGG: mtt:Ftrac_2177 hypothetical protein; SPTR:  uncharacterized protein
YP_004775433.1	KEGG: chu:CHU_0616 hypothetical protein; SPTR:  uncharacterized protein
YP_004775434.1	PFAM: Calcineurin-like phosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: mtt:Ftrac_2176 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: UDP-2,3-diacylglucosamine hydrolase
YP_004775435.1	PFAM: Peptidase M41; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR003593:IPR011546:IPR003959:IPR 000642; KEGG: mtt:Ftrac_1834 membrane protease FtsH catalytic subunit; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent zinc metalloprotease FtsH; TIGRFAM: Peptidase M41, FtsH
YP_004775436.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: sli:Slin_3002 iojap-like protein; PFAM: Iojap-related protein; SPTR: Iojap-like protein; TIGRFAM: Iojap-related protein
YP_004775437.1	PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143; KEGG: dfe:Dfer_5042 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Biotin-[acetyl-CoA-carboxylase] ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase
YP_004775438.1	PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0499 S-adenosylhomocysteine hydrolase; HAMAP: Adenosylhomocysteinase; InterPro IPR000043:IPR015878; KEGG: fbc:FB2170_07534 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; SPTR: Adenosylhomocysteinase; TIGRFAM: S-adenosyl-L-homocysteine hydrolase
YP_004775439.1	PFAM: DoxX; InterPro IPR011637; KEGG: cpi:Cpin_4093 DoxX family protein; PFAM: DoxX; SPTR: DoxX family protein
YP_004775440.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808:IPR000595; KEGG: cly:Celly_3270  Crp/Fnr family transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp family
YP_004775441.1	PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR001789:IPR018060:IPR 011110:IPR011123:IPR000005; KEGG: cpi:Cpin_5544 histidine kinase; PFAM: ATP-binding region, ATPase-like; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Helix-turn-helix, AraC type; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Helix-turn-helix, AraC domain; SPTR: Histidine kinase
YP_004775442.1	PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: fbc:FB2170_02090  lipoprotein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase 1
YP_004775443.1	PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: psm:PSM_A0584 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: UPF0391 membrane protein ADG881_936
YP_004775444.1	PFAM: Protein of unknown function (DUF3037); KEGG: fjo:Fjoh_2565 hypothetical protein; SPTR:  uncharacterized protein
YP_004775445.1	KEGG: wvi:Weevi_0005 hypothetical protein; SPTR:  uncharacterized protein
YP_004775446.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: psn:Pedsa_0209  transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; SPTR:  transcriptional regulator, Crp/Fnr family
YP_004775447.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: psn:Pedsa_0208 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004775448.1	PFAM: HlyD family secretion protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089; KEGG: secretion protein HlyD family protein; PFAM: Biotin/lipoyl attachment; SPTR: ABC superfamily ATP binding cassette transporter membrane protein
YP_004775449.1	PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: fps:FP0294 ABC transporter permease; PFAM: ABC-2 type transporter; SPTR: ABC superfamily ATP binding cassette transporter permease
YP_004775450.1	PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: npu:Npun_R3418 peptidase S45, penicillin amidase; PFAM: Peptidase S45, penicillin amidase; SPTR: Peptidase S45, penicillin amidase
YP_004775451.1	PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase; COGs: COG3384 conserved hypothetical protein; InterPro IPR004183; KEGG: fjo:Fjoh_3243 extradiol ring-cleavage dioxygenase III subunit B; PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; SPTR:  uncharacterized protein
YP_004775452.1	KEGG: phe:Phep_1520 hypothetical protein; SPTR:  uncharacterized protein
YP_004775453.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: phe:Phep_1519 type 11 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11
YP_004775454.1	PFAM: Protein of unknown function (DUF975); COGs: COG5523 integral membrane protein; InterPro IPR010380; KEGG: pjd:Pjdr2_0672 protein of unknown function DUF975; PFAM: Protein of unknown function DUF975; SPTR:  uncharacterized protein
YP_004775455.1	PFAM: Protein of unknown function (DUF559); COGs: COG2852 conserved hypothetical protein; InterPro IPR007569; KEGG: mtt:Ftrac_0387 hypothetical protein; PFAM: Protein of unknown function DUF559; SPTR:  DNA methylase
YP_004775456.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgi:PG1658 ISPg4, transposase; PFAM: Transposase, IS4-like; SPTR: ISPg4, transposase
YP_004775457.1	KEGG: bfs:BF3552 hypothetical protein; SPTR:  uncharacterized protein
YP_004775458.1	PFAM: alpha/beta hydrolase fold; InterPro IPR000073; KEGG: dfe:Dfer_3650 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR:  hydrolase, alpha/beta fold family
YP_004775459.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304:IPR004455; KEGG: cpi:Cpin_0657 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase
YP_004775460.1	PFAM: Peptidase M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: cly:Celly_2536 peptidase M1 membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Peptidase M1 membrane alanine aminopeptidase
YP_004775461.1	PFAM: Creatinine amidohydrolase; COGs: COG1402 Uncharacterized protein  amidase; InterPro IPR003785; KEGG: fbc:FB2170_16431 hypothetical protein; PFAM: Creatininase; SPTR:  amidase
YP_004775462.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: shg:Sph21_0626 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004775463.1	PFAM: Amidohydrolase; InterPro IPR006680; KEGG: rbi:RB2501_00486 amidohydrolase enzyme; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase enzyme
YP_004775464.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM:  NAD(P)H quinone oxidoreductase, PIG3 family; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014189:IPR013154:IPR013149; KEGG: mtt:Ftrac_2305 nad(p)h quinone oxidoreductase, pig3 family; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: Quinone oxidoreductase , PIG3
YP_004775465.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cts:Ctha_0244 UspA domain-containing protein; PFAM: UspA; SPTR:  universal stress protein
YP_004775466.1	PFAM: Thioesterase superfamily; Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; KEGG: sli:Slin_1854 hypothetical protein; SPTR:  uncharacterized protein
YP_004775468.1	PFAM: Prolyl oligopeptidase; KEGG: pbs:Plabr_2183 acetyl xylan esterase; SPTR:  uncharacterized protein
YP_004775469.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: dfe:Dfer_4437 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase
YP_004775470.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545:IPR005580; KEGG: fba:FIC_00865  ATP-independent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR:  ATP-independent RNA helicase
YP_004775471.1	KEGG: sli:Slin_3472 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004775472.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; COGs: COG1069 Ribulose kinase; InterPro IPR018484:IPR018485; KEGG: gfo:GFO_0697 ribulokinase; PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal; SPTR: Ribulokinase
YP_004775474.1	KEGG: hypothetical protein
YP_004775477.1	PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_1978 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR:  uncharacterized protein
YP_004775478.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR006311:IPR010869; KEGG: sli:Slin_0960 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: Twin-arginine translocation pathway signal
YP_004775479.1	PFAM: Aldo/keto reductase; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: abo:ABO_2414 aldehyde reductase; PFAM: Aldo/keto reductase; SPTR: Aldehyde reductase; manually curated
YP_004775480.1	PFAM: Aldo/keto reductase; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: srm:SRM_01456 aldehyde reductase; PFAM: Aldo/keto reductase; SPTR: Alcohol dehydrogenase
YP_004775482.1	PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: mtt:Ftrac_2273 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein
YP_004775483.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03975 arylsulfatase A; PFAM: Sulfatase; SPTR: Sulfatase
YP_004775484.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: mtt:Ftrac_2236 glu/leu/phe/val dehydrogenase dimerization region; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase dimerization region
YP_004775486.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: shg:Sph21_3958 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Gallidermin/nisin family lantibiotic
YP_004775487.1	SPTR:  uncharacterized protein
YP_004775488.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: shg:Sph21_0211 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR:  dehydrogenase
YP_004775489.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pdi:BDI_3965 arylsulfatase precursor; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004775490.1	KEGG: dfe:Dfer_4537 FG-GAP repeat-containing protein; SPTR: FG-GAP repeat-containing protein
YP_004775491.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428:IPR013427:IPR003088; KEGG: ipa:Isop_1996 membrane-bound dehydrogenase domain-containing protein; PFAM: Cytochrome c, class I; SPTR: L-sorbosone dehydrogenase; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004775492.1	KEGG: fjo:Fjoh_4522 hypothetical protein
YP_004775493.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004775494.1	KEGG: mtt:Ftrac_3577 cytoplasmic protein; SPTR: Hypothetical cytosolic protein
YP_004775495.1	KEGG: fjo:Fjoh_2321 OmpA/MotB domain-containing protein; SPTR:  uncharacterized protein
YP_004775497.1	PFAM: Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: mtt:Ftrac_2159 peptidase S41; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: Peptidase S41
YP_004775498.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013428:IPR013427:IPR003088; KEGG: pbs:Plabr_3734 membrane-bound dehydrogenase domain protein; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004775499.1	InterPro IPR006311; KEGG: psl:Psta_2338 hypothetical protein; SPTR:  uncharacterized protein
YP_004775500.1	PFAM: N-acetyltransferase; COGs: COG2162 Arylamine N-acetyltransferase; InterPro IPR001447; KEGG: shg:Sph21_4060 arylamine N-acetyltransferase; PFAM: N-acetyltransferase; SPTR: Arylamine N-acetyltransferase
YP_004775502.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: pdi:BDI_2047  NADH-dependent dyhydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase
YP_004775503.1	KEGG: bth:BT_3593 hypothetical protein; SPTR:  uncharacterized protein
YP_004775504.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004775505.1	KEGG: lby:Lbys_2804 hypothetical protein; SPTR:  uncharacterized protein
YP_004775506.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4057 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: Twin-arginine translocation pathway signal
YP_004775507.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03325 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A
YP_004775508.1	PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: dfe:Dfer_2125 protein of unknown function DUF1593; PFAM: Protein of unknown function DUF1593; SPTR:  uncharacterized protein
YP_004775509.1	PFAM: Heparinase II/III-like protein; KEGG: bhl:Bache_0095 heparinase II/III family protein; SPTR:  uncharacterized protein
YP_004775510.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3463 sulfatase; PFAM: Sulfatase; SPTR: Probable sulfatase AtsG
YP_004775511.1	PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: mtt:Ftrac_1602 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter
YP_004775512.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_1561 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004775513.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775514.1	KEGG: zpr:ZPR_0790 hypothetical protein; SPTR:  uncharacterized protein
YP_004775515.1	PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: mtt:Ftrac_0905 amp-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Long-chain-fatty-acid--CoA ligase
YP_004775516.1	PFAM: Maltose acetyltransferase; COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: zpr:ZPR_0801 maltose O-acetyltransferase; SPTR: Maltose O-acetyltransferase
YP_004775517.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775518.1	PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR006055:IPR000305:IPR013520; KEGG: mtt:Ftrac_0002 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit
YP_004775519.1	PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: gfo:GFO_1691 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase
YP_004775520.1	KEGG: fbc:FB2170_14168 hypothetical protein; SPTR:  uncharacterized protein
YP_004775521.1	SPTR:  uncharacterized protein
YP_004775522.1	PFAM: Sir2 family; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent deacetylase; InterPro IPR003000; KEGG: chu:CHU_2345 NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: NAD-dependent deacetylase
YP_004775523.1	PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: swp:swp_3739 OmpA protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR:  outer membrane protein
YP_004775524.1	SPTR:  uncharacterized protein
YP_004775525.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR004155:IPR010496; KEGG: phe:Phep_2672 hypothetical protein; PFAM: Protein of unknown function DUF1080; PBS lyase HEAT-like repeat; SPTR:  uncharacterized protein
YP_004775526.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: dfe:Dfer_2975 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004775528.1	PFAM: Rho termination factor, N-terminal domain; KEGG: fjo:Fjoh_3369 hypothetical protein; SPTR:  uncharacterized protein
YP_004775530.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR006154:IPR003601:IPR003602:IPR 006171:IPR013497; KEGG: mtt:Ftrac_3551 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type
YP_004775532.1	PFAM: Phosphoglycerate mutase; TIGRFAM: phosphohistidine phosphatase SixA; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: psn:Pedsa_2108  phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SPTR:  phosphohistidine phosphatase SixA
YP_004775533.1	PFAM: Arginase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase; InterPro IPR006035; KEGG: mtt:Ftrac_3549 arginase/agmatinase/formiminoglutamase; PFAM: Ureohydrolase; SPTR: Arginase/agmatinase/formiminoglutamase
YP_004775534.1	PFAM: MatE; TIGRFAM:  efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: mtt:Ftrac_3283 mate efflux family protein; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; manually curated
YP_004775535.1	KEGG: maq:Maqu_3469 hypothetical protein; SPTR: Probable secreted protein
YP_004775536.1	PFAM: Trm112p-like protein; InterPro IPR005651; KEGG: ran:Riean_0485 hypothetical protein; PFAM: Protein of unknown function DUF343; SPTR:  uncharacterized protein
YP_004775537.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: ran:Riean_0486 thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine monophosphate synthase
YP_004775538.1	PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728:IPR010918; KEGG: ran:Riean_0487 air synthase related protein domain protein; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; SPTR: Hydrogenase maturation factor
YP_004775539.1	PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ran:Riean_0488 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase
YP_004775541.1	KEGG: chu:CHU_2246 hypothetical protein; SPTR:  uncharacterized protein
YP_004775542.1	TIGRFAM: Dyp-type peroxidase; COGs: COG2837 iron-dependent peroxidase; KEGG: chu:CHU_2248 peroxidase; SPTR: Peroxidase
YP_004775543.1	KEGG: chu:CHU_2247 hypothetical protein; SPTR:  uncharacterized protein
YP_004775544.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_2520 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004775545.1	PFAM:  transposase; InterPro IPR007069; KEGG: tjr:TherJR_1461  transposase; PFAM: Transposase, IS801/IS1294; SPTR:  transposase
YP_004775547.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR:  uncharacterized protein
YP_004775548.1	PFAM:  transposase; InterPro IPR007069; KEGG: tjr:TherJR_1461  transposase; PFAM: Transposase, IS801/IS1294; SPTR:  transposase
YP_004775549.1	SPTR:  uncharacterized protein
YP_004775551.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: zpr:ZPR_3312 reverse transcriptase; PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR:  uncharacterized protein; manually curated
YP_004775552.1	KEGG: esi:Exig_2764 hypothetical protein; SPTR:  uncharacterized protein
YP_004775553.1	KEGG: fba:FIC_00622 hypothetical protein; SPTR:  uncharacterized protein
YP_004775556.1	KEGG: cly:Celly_1483 hypothetical protein; SPTR:  uncharacterized protein
YP_004775558.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sde:Sde_0435 5,10-methylenetetrahydrofolate reductase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase
YP_004775559.1	PFAM: Domain of unknown function (DUF1083); PKD domain; InterPro IPR000601; KEGG: sus:Acid_3986 PKD domain-containing protein; PFAM: PKD; SMART: PKD; SPTR: PKD domain containing protein
YP_004775560.1	PFAM: Bacterial alpha-L-rhamnosidase; Alpha-L-rhamnosidase N-terminal domain; InterPro IPR013737:IPR008902; KEGG: alpha-L-rhamnosidase; PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; SPTR: Alpha-rhamnosidase
YP_004775561.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: phe:Phep_2669 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004775562.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_1919 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004775563.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1274 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004775564.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_0773 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775565.1	KEGG: rca:Rcas_2444 hypothetical protein; SPTR:  uncharacterized protein
YP_004775566.1	KEGG: htu:Htur_4781 hypothetical protein; SPTR:  uncharacterized protein
YP_004775568.1	PFAM: alpha/beta hydrolase fold
YP_004775569.1	KEGG: pdi:BDI_3448 hypothetical protein; SPTR:  uncharacterized protein
YP_004775570.1	KEGG: rmr:Rmar_2068 hypothetical protein; SPTR:  uncharacterized protein
YP_004775572.1	PFAM: Sulfotransferase domain; KEGG: aar:Acear_2160 hypothetical protein; SPTR:  uncharacterized protein
YP_004775573.1	PFAM: LytTr DNA-binding domain; InterPro IPR007492; PFAM: LytTr DNA-binding region
YP_004775574.1	TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: gme:Gmet_2335 methyltransferase FkbM; SPTR: Methyltransferase FkbM; TIGRFAM: Methyltransferase FkbM
YP_004775575.1	KEGG: pdi:BDI_0151 hypothetical protein; SPTR:  uncharacterized protein
YP_004775576.1	PFAM: Lanthionine synthetase C-like protein; InterPro IPR007822; KEGG: pdi:BDI_0152 hypothetical protein; PFAM: Lanthionine synthetase C-like; SPTR: Predicted protein
YP_004775577.1	KEGG: rmr:Rmar_2068 hypothetical protein; SPTR:  uncharacterized protein
YP_004775579.1	KEGG: sli:Slin_4441 hypothetical protein; SPTR:  uncharacterized protein
YP_004775583.1	PFAM: Kelch motif; InterPro IPR006652; KEGG: lil:LA_1759 hypothetical protein; PFAM: Kelch repeat type 1; SPTR:  uncharacterized protein
YP_004775584.1	PFAM: Trehalose utilisation; KEGG: sli:Slin_1261 hypothetical protein; SPTR:  uncharacterized protein
YP_004775588.1	PFAM: PhoD-like phosphatase; KEGG: psl:Psta_3961 twin-arginine translocation pathway signal; SPTR: Twin-arginine translocation pathway signal
YP_004775589.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_14578  sulfatase; PFAM: Sulfatase; SPTR:  sulfatase
YP_004775590.1	PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: dfe:Dfer_1978 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR: Xanthan lyase
YP_004775592.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_2316 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004775593.1	PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_2322 hypothetical protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004775594.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1509 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004775595.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2744 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase
YP_004775596.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0659 cerebroside-sulfatase; PFAM: Sulfatase; SPTR: Cerebroside-sulfatase
YP_004775597.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775598.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_3123 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004775599.1	PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_3124 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775601.1	PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013519:IPR011519:IPR013517; KEGG: cao:Celal_0458 aspic/unbv domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC/UnbV domain protein
YP_004775602.1	PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: rmr:Rmar_0511 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase
YP_004775603.1	InterPro IPR012307; KEGG: sli:Slin_2651 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004775604.1	PFAM: Cytochrome c; InterPro IPR003088; KEGG: dfe:Dfer_5289 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I
YP_004775605.1	PFAM: Isochorismatase; KEGG: rba:RB1599 signal peptide; SPTR:  uncharacterized protein
YP_004775606.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3894 sulfatase; PFAM: Sulfatase; SPTR:  uncharacterized protein
YP_004775607.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sus:Acid_1241 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004775608.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_0809 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004775609.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2292 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004775610.1	PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_1676 hypothetical protein; PFAM: RagB/SusD; SPTR: Outer membrane protein
YP_004775611.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_1677 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004775612.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: dfe:Dfer_4707 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004775613.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: phe:Phep_0060 sigma-70 family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR:  ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004775614.1	PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: mtt:Ftrac_1980 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Beta-propeller domain of methanol dehydrogenase type protein
YP_004775615.1	PFAM: Domain of unknown function (DUF477); COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: mtt:Ftrac_2203 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR:  uncharacterized protein
YP_004775616.1	PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: dfe:Dfer_4336 LemA family protein; PFAM: LemA; SPTR: LemA protein
YP_004775617.1	KEGG: pdi:BDI_3423 hypothetical protein; SPTR:  uncharacterized protein
YP_004775618.1	KEGG: rec:RHECIAT_CH0003299 hypothetical protein; SPTR:  uncharacterized protein
YP_004775619.1	KEGG: shn:Shewana3_3703 hypothetical protein; SPTR:  uncharacterized protein
YP_004775620.1	PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: nde:NIDE3513  NADPH-dependent oxidoreductase; PFAM: Aldo/keto reductase; SPTR: Aldo/keto reductase
YP_004775621.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: ppn:Palpr_2815 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor
YP_004775622.1	PFAM: Phosphoribosyl transferase domain; COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: tra:Trad_0659 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Phosphoribosyltransferase
YP_004775623.1	KEGG: tra:Trad_0662 hypothetical protein; SPTR:  uncharacterized protein
YP_004775624.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: fba:FIC_00360  acetyltransferase; SPTR:  acetyltransferase
YP_004775625.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: cly:Celly_0938 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alkyl hydroperoxide reductase, F52a subunit
YP_004775626.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: svo:SVI_0853 ROK family protein; PFAM: ROK; SPTR: ROK family protein
YP_004775627.1	PFAM: 7TM diverse intracellular signalling; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011622:IPR011623:IPR003661:IPR003594:IPR 001789; KEGG: pmy:Pmen_3766 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Signal transduction histidine kinase-like protein
YP_004775628.1	PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011622:IPR011623:IPR003661:IPR003594:IPR 001789; KEGG: integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Signal transduction histidine kinase-like protein
YP_004775631.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase accessory protein FdhD; COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; HAMAP: Protein fdhD; InterPro IPR003786; KEGG: protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD; SPTR: Protein FdhD homolog; TIGRFAM: Formate dehydrogenase, subunit FdhD
YP_004775632.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: cpi:Cpin_4072 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit
YP_004775634.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216  arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004775635.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterPro IPR019551:IPR019556:IPR002372:IPR018391; KEGG: ote:Oter_0062 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme, N-terminal; PQQ-dependent enzyme, C-terminal; Pyrrolo-quinoline quinone repeat; SPTR:  PQQ enzyme repeat
YP_004775636.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: ipa:Isop_1913 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase
YP_004775638.1	PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; COGs: COG1643 HrpA-like helicase; InterProIPR001650:IPR007502:IPR013689:IPR010225:IPR 014001; KEGG: chu:CHU_3110 ATP-dependent helicase; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent helicase HrpB; TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type
YP_004775639.1	PFAM: Protein of unknown function (DUF2911); KEGG: sli:Slin_2860 hypothetical protein; SPTR:  uncharacterized protein
YP_004775640.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: dfe:Dfer_5057 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold domain protein
YP_004775641.1	KEGG: aco:Amico_1736  transcriptional regulator, PaaX family; SPTR:  transcription regulator
YP_004775642.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: chu:CHU_2999 b-glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family
YP_004775643.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: atm:ANT_20150  acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR:  acetyltransferase
YP_004775644.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775645.1	KEGG: mar:MAE_36240 hypothetical protein; SPTR:  uncharacterized protein
YP_004775646.1	KEGG: ppy:PPE_01146 hypothetical protein; SPTR:  uncharacterized protein
YP_004775647.1	PFAM: ABC transporter; ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439:IPR003593; KEGG: gfo:GFO_2029 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein
YP_004775648.1	KEGG: cyp:PCC8801_2393 hypothetical protein; SPTR: TPR repeat-containing protein
YP_004775649.1	TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: bth:BT_2943  hexapeptide transferase; SPTR: Pilin glycosylation protein PglB
YP_004775650.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ava:Ava_2389 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2
YP_004775651.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: mtt:Ftrac_0590 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004775652.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fjo:Fjoh_0314 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Candidate beta-glycosyltransferase; Glycosyltransferase 2
YP_004775653.1	PFAM: 4-alpha-L-fucosyltransferase (Fuc4NAc transferase); KEGG: she:Shewmr4_1323 hypothetical protein; SPTR:  uncharacterized protein
YP_004775654.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abo:ABO_0919 glycosyl transferase, PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase
YP_004775655.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: abo:ABO_0920 glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family protein
YP_004775656.1	KEGG: gfo:GFO_2000 hypothetical protein; SPTR:  uncharacterized protein
YP_004775657.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: par:Psyc_0667 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Similar to Glycosyl transferases group 1
YP_004775658.1	KEGG: avn:Avin_30010 hypothetical protein; SPTR:  uncharacterized protein
YP_004775659.1	KEGG: gfo:GFO_2000 hypothetical protein; SPTR:  uncharacterized protein
YP_004775660.1	PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: gfo:GFO_1999 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase
YP_004775661.1	KEGG: phe:Phep_0899 hypothetical protein; SPTR:  uncharacterized protein
YP_004775662.1	PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase; COGs: COG1803 Methylglyoxal synthase; HAMAP: Methylglyoxal synthase; InterPro IPR011607:IPR004363; KEGG: mtt:Ftrac_0851 methylglyoxal synthase; PFAM: MGS-like; SPTR: Methylglyoxal synthase; TIGRFAM: Methylglyoxal synthase
YP_004775663.1	PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023:IPR012828; KEGG: mtt:Ftrac_3083 6-phosphofructokinase; PFAM: Phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase
YP_004775664.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341; KEGG: dfe:Dfer_1106 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase/muconate lactonizing protein
YP_004775665.1	PFAM: Membrane protein of unknown function; InterPro IPR007165; KEGG: gem:GM21_2032 membrane protein of unknown function; PFAM: Membrane protein of unknown function; SPTR: Membrane protein
YP_004775666.1	KEGG: mtt:Ftrac_0747 hypothetical protein; SPTR:  uncharacterized protein
YP_004775667.1	PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mtt:Ftrac_0746 histone deacetylase; PFAM: Histone deacetylase superfamily; SPTR: Histone deacetylase
YP_004775668.1	PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: mtt:Ftrac_0744 outer membrane chaperone skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SPTR:  uncharacterized protein
YP_004775669.1	PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase; COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: gau:GAU_2131 deoxyhypusine synthase-like protein; PFAM: Deoxyhypusine synthase; SPTR: Deoxyhypusine synthase
YP_004775670.1	PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: mtt:Ftrac_0146 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein
YP_004775671.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1582 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  TonB-dependent receptor
YP_004775672.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: sli:Slin_0331 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signaling protein without kinase domain protein
YP_004775673.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: phe:Phep_3124 LytTr DNA-binding subunit; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver domain protein
YP_004775674.1	PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; Peptide methionine sulfoxide reductase msrB; InterPro IPR002569:IPR002579; KEGG: vfi:VF_A0005 peptide-methionine (S)-S-oxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; SPTR: Peptide methionine sulfoxide reductase MsrA/msrB; TIGRFAM: Methionine sulphoxide reductase B; Peptide methionine sulphoxide reductase MsrA
YP_004775675.1	KEGG: tva:TVAG_216960 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein
YP_004775676.1	PFAM: BNR/Asp-box repeat; KEGG: bhl:Bache_2784 sialidase; SPTR: BNR/Asp-box repeat protein
YP_004775677.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655:IPR003661:IPR003594:IPR000014; KEGG: mtt:Ftrac_2914 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; PAS; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS
YP_004775678.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: mtt:Ftrac_3597 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR:  pyridine nucleotide-disulfide oxidoreductase
YP_004775679.1	COGs: COG0348 Polyferredoxin; InterPro IPR001450; KEGG: mtt:Ftrac_3598 hypothetical protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR:  4Fe-4S binding domain protein
YP_004775680.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3361 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2
YP_004775681.1	PFAM: Glycosyl transferase 2; InterPro IPR001173; KEGG: mtt:Ftrac_3360 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family
YP_004775682.1	KEGG: mtt:Ftrac_1593 hypothetical protein; SPTR:  uncharacterized protein
YP_004775683.1	KEGG: mtt:Ftrac_3362 hypothetical protein; SPTR:  uncharacterized protein
YP_004775684.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: cly:Celly_0732 LuxR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family
YP_004775685.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR011712:IPR003594; KEGG: shg:Sph21_3745 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Multi-sensor signal transduction histidine kinase
YP_004775686.1	PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941:IPR012748; KEGG: cly:Celly_0741 nitrite reductase (NAD(P)H) small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Nitrite reductase (NAD(P)H), small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD
YP_004775687.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR013027:IPR007419:IPR005117:IPR006067:IPR 012744; KEGG: shg:Sph21_3748 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region; SPTR: Nitrite reductase (NAD(P)H), large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB
YP_004775688.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878:IPR006366; KEGG: fjo:Fjoh_1505 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal
YP_004775689.1	PFAM: Rubredoxin; InterPro IPR004039; KEGG: cao:Celal_1353 rubredoxin-type fe(cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin
YP_004775690.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006657:IPR013027:IPR 007419; KEGG: nitrate reductase., nitrite reductase (NAD(P)H); PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; SPTR: Nitrate reductase, Nitrite reductase (NAD(P)H)
YP_004775691.1	PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: lbf:LBF_2686 nitrate/nitrite transporter; PFAM: Major facilitator superfamily MFS-1; SPTR:  nitrite extrusion protein 1 NarK,MFS superfamily
YP_004775693.1	KEGG: zpr:ZPR_3092 hypothetical protein; SPTR:  uncharacterized protein
YP_004775694.1	PFAM: Patatin-like phospholipase; COGs: COG4667 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: zpr:ZPR_1206 patatin-like phospholipase; PFAM: Patatin; SPTR: Serine protease
YP_004775695.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: pbs:Plabr_4562 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR:  uncharacterized protein
YP_004775696.1	PFAM: Aldo/keto reductase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: sta:STHERM_c04250 hypothetical protein; PFAM: Aldo/keto reductase; SPTR:  uncharacterized protein
YP_004775697.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2092 Iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase
YP_004775698.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cps:CPS_2368  N-acetylglucosamine-6-sulfatase; PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase)
YP_004775699.1	KEGG: rba:RB7871 signal peptide; SPTR:  uncharacterized protein
YP_004775700.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: dfe:Dfer_1793 transcriptional regulator, LuxR family; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70
YP_004775701.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cpi:Cpin_1889 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004775702.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_0502 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein
YP_004775703.1	KEGG: pdi:BDI_0499 hypothetical protein; SPTR: Lipoprotein
YP_004775704.1	KEGG: rba:RB940 hypothetical protein; SPTR:  uncharacterized protein
YP_004775705.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterProIPR001258:IPR003088:IPR013428:IPR013427:IPR 004155; KEGG: dfe:Dfer_3707 membrane-bound dehydrogenase domain protein; PFAM: Cytochrome c, class I; NHL repeat; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004775706.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: sus:Acid_3331 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase- NAD-employing oxidoreductase of the GFO family protein
YP_004775707.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2248); COGs: COG4307 conserved hypothetical protein; InterPro IPR011201; KEGG: gbe:GbCGDNIH1_1418  cytoplasmic protein; PFAM: Uncharacterised conserved protein UCP012641; SPTR:  uncharacterized protein
YP_004775708.1	PFAM: Glycosyl hydrolases family 39; KEGG: gpb:HDN1F_14410 hypothetical protein; SPTR:  uncharacterized protein
YP_004775709.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: phe:Phep_0775 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004775710.1	PFAM: HI0933-like protein; InterPro IPR004792; KEGG: psl:Psta_0465 xanthan lyase; PFAM: HI0933-like protein; SPTR:  uncharacterized protein
YP_004775711.1	KEGG: sde:Sde_2315 hypothetical protein; SPTR: Probable cycloinulo-oligosaccharide fructanotransferase
YP_004775712.1	KEGG: rba:RB9442 hypothetical protein; SPTR:  uncharacterized protein
YP_004775713.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR:  uncharacterized protein
YP_004775714.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR:  uncharacterized protein
YP_004775715.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_2338 hypothetical protein; SPTR:  uncharacterized protein
YP_004775716.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013428:IPR013427; KEGG: membrane-bound dehydrogenase domain-containing protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004775717.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: dfe:Dfer_3436 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004775718.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307:IPR006311; KEGG: cly:Celly_1669 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable glyoxylate-induced protein
YP_004775719.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: rba:RB7871 signal peptide; SPTR:  uncharacterized protein
YP_004775722.1	PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: sus:Acid_6536 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004775723.1	KEGG: dfe:Dfer_5762 hypothetical protein; SPTR:  uncharacterized protein
YP_004775724.1	KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR:  uncharacterized protein
YP_004775725.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR013656:IPR013655:IPR003661:IPR003594:IPR 000014:IPR001610; KEGG: chu:CHU_1899 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold-3; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS
YP_004775726.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_0295 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004775727.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70
YP_004775728.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cly:Celly_2996 anti-FecI sigma factor FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004775729.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_0357 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  TonB-linked outer membrane receptor protein
YP_004775730.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_2495 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  outer membrane protein
YP_004775731.1	KEGG: aex:Astex_2206 hypothetical protein; SPTR:  uncharacterized protein
YP_004775732.1	PFAM: FAD binding domain; InterPro IPR004792; KEGG: gym:GYMC10_3240 FAD dependent oxidoreductase; PFAM: HI0933-like protein; SPTR:  dihydrolipoamide dehydrogenase CdlD
YP_004775733.1	KEGG: shg:Sph21_4330 hypothetical protein; SPTR:  uncharacterized protein
YP_004775735.1	PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329  transposase; SPTR:  transposase
YP_004775736.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1779 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775737.1	PFAM: D-aminoacylase, C-terminal region; Amidohydrolase; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680:IPR012855; KEGG: N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 1; SPTR: N-acyl-D-amino-acid deacylase
YP_004775738.1	PFAM: Domain of unknown function (DUF1961); SPTR:  uncharacterized protein
YP_004775739.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_3210 Iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase
YP_004775740.1	PFAM: YceI-like domain; InterPro IPR007372; KEGG: zpr:ZPR_0535 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Secreted protein
YP_004775741.1	KEGG: rbi:RB2501_13524 hypothetical protein; SPTR:  uncharacterized protein
YP_004775742.1	KEGG: fjo:Fjoh_1778 hypothetical protein; SPTR:  uncharacterized protein
YP_004775743.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775744.1	InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004775745.1	KEGG: plm:Plim_3272 hypothetical protein; SPTR:  uncharacterized protein
YP_004775746.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: mtt:Ftrac_0556 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; SPTR: Peptidase M16 domain protein
YP_004775747.1	PFAM: BNR/Asp-box repeat; COGs: COG4409 Neuraminidase (sialidase); KEGG: plm:Plim_3447 glycosyl hydrolase BNR repeat-containing protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein
YP_004775748.1	PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019405; KEGG: dfe:Dfer_2435 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394; SPTR: 6-phosphogluconolactonase
YP_004775749.1	PFAM: Alkaline phosphatase; COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: cly:Celly_2445 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase
YP_004775750.1	KEGG: chu:CHU_3552 hypothetical protein; SPTR:  uncharacterized protein
YP_004775751.1	PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: mtt:Ftrac_0336 short-chain dehydrogenase/reductase sdr; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004775752.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: phe:Phep_1694 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004775753.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: psn:Pedsa_0739 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004775754.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: psn:Pedsa_0686 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR:  sodium-coupled permease
YP_004775755.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: zpr:ZPR_3488 xylose isomerase-like protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase-like protein
YP_004775756.1	PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: cpi:Cpin_2244 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase
YP_004775757.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_00645 aryl-sulphate sulphohydrolase; PFAM: Sulfatase; SPTR: Arylsulfatase A
YP_004775758.1	KEGG: mtt:Ftrac_1852 hypothetical protein; SPTR:  uncharacterized protein
YP_004775759.1	PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: osp:Odosp_3506 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family
YP_004775760.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_4333 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent Receptor Plug domain-containing protein
YP_004775761.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_4332 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004775762.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cps:CPS_2368  N-acetylglucosamine-6-sulfatase; PFAM: Sulfatase; SPTR:  N-acetylglucosamine-6-sulfatase
YP_004775763.1	KEGG: dfe:Dfer_1848 hypothetical protein; SPTR:  uncharacterized protein
YP_004775764.1	KEGG: dfe:Dfer_2604 hypothetical protein; SPTR:  uncharacterized protein
YP_004775765.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR002218; KEGG: dfe:Dfer_2605  pyridine nucleotide-disulphide oxidoreductase; PFAM: Glucose-inhibited division protein A-related; SPTR:  pyridine nucleotide-disulphide oxidoreductase
YP_004775766.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB2377 arylsulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase
YP_004775767.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: sodium solute transporter superfamily protein; PFAM: Sodium/solute symporter; SPTR:  uncharacterized protein
YP_004775768.1	PFAM: FAD binding domain; InterPro IPR003953; KEGG: shg:Sph21_1996 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR:  uncharacterized protein
YP_004775769.1	PFAM: F5/8 type C domain; InterPro IPR000421; KEGG: shg:Sph21_1993 hypothetical protein; PFAM: Coagulation factor 5/8 type, C-terminal; SPTR:  uncharacterized protein
YP_004775770.1	PFAM: Alginate lyase; KEGG: sli:Slin_0557 hypothetical protein; SPTR:  uncharacterized protein
YP_004775771.1	SPTR:  uncharacterized protein
YP_004775772.1	PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003018:IPR003661:IPR003594; KEGG: dfe:Dfer_1089 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; GAF; SPTR: GAF sensor signal transduction histidine kinase
YP_004775773.1	PFAM: Protein of unknown function (DUF2911); KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775774.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013656:IPR003661:IPR003594:IPR000014; KEGG: chu:CHU_1899 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004775775.1	PFAM: Metallopeptidase M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR002467; KEGG: cly:Celly_0358 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; SPTR: Methionine aminopeptidase, type I; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1
YP_004775776.1	PFAM: Glycosyl hydrolases family 43; SPTR:  uncharacterized protein
YP_004775777.1	PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: sli:Slin_1486 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family
YP_004775778.1	PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: Rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein
YP_004775779.1	PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: Rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein
YP_004775780.1	PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: Ferritin Dps family protein; PFAM: Ferritin/Dps protein; SPTR: DNA-binding protein; DPS family protein
YP_004775781.1	PFAM: Aminoglycoside 3-N-acetyltransferase; COGs: COG2746 Aminoglycoside N3'-acetyltransferase; InterPro IPR003679; KEGG: eel:EUBELI_20580 aminoglycoside N3-acetyltransferase; PFAM: Aminoglycoside 3-N-acetyltransferase; SPTR:  uncharacterized protein
YP_004775782.1	PFAM: WD40-like Beta Propeller Repeat; Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR011659:IPR002469:IPR006680; KEGG: fbc:FB2170_14083 hypothetical protein; PFAM: Amidohydrolase 1; Peptidase S9B, dipeptidylpeptidase IV N-terminal; WD40-like Beta Propeller; SPTR:  uncharacterized protein
YP_004775783.1	COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: hoh:Hoch_1862 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004775784.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: sli:Slin_1843 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Dehydrogenase
YP_004775785.1	PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase; TIGRFAM: Mannonate dehydratase
YP_004775786.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: pdi:BDI_0377 D-mannonate oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Fructuronate reductase
YP_004775787.1	PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus; SAF domain; COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392; KEGG: cpi:Cpin_6828 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; SPTR: Altronate dehydratase
YP_004775788.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: rmr:Rmar_2280 TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit
YP_004775789.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: rbi:RB2501_03975  TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: TRAP dicarboxylate transporter, DctQ subunit
YP_004775790.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: zpr:ZPR_2954 DctM-like transporter; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit
YP_004775792.1	PFAM: Helix-turn-helix; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: sse:Ssed_4364 transcriptional regulator protein-like protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator protein-like protein
YP_004775793.1	KEGG: gfo:GFO_0831 membrane protein; SPTR: Membrane protein
YP_004775794.1	PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: fbc:FB2170_04485 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR:  uncharacterized protein
YP_004775795.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR010869; KEGG: fbc:FB2170_04490 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR:  uncharacterized protein
YP_004775796.1	PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: aga:AgaP_AGAP000113 AGAP000113-PA; PFAM: Peptidase M14, carboxypeptidase A; SPTR:  uncharacterized protein
YP_004775797.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1871 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-linked outer membrane receptor protein
YP_004775798.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_1872 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775799.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: cts:Ctha_1009 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family
YP_004775800.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: bvu:BVU_0505 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004775801.1	PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_6287 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775802.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: pjd:Pjdr2_6053 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family
YP_004775803.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR000644; KEGG: bfs:BF3343 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; SPTR:  inosine-5'-monophosphate dehydrogenase (GMP biosynthesis)
YP_004775805.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG5616 integral membrane protein; InterProIPR001054:IPR001440:IPR000005:IPR019734:IPR 018060; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC domain; Adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide repeat; SPTR: Adenylate cyclase; Cya3
YP_004775806.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: NADPH:quinone reductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR:  quinone oxidoreductase
YP_004775807.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_09476 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Beta-lactamase-related; SPTR: Serine-type D-Ala-D-Ala carboxypeptidase
YP_004775808.1	PFAM: Glycoside hydrolase 97; InterPro IPR019563; KEGG: fjo:Fjoh_3805 hypothetical protein; PFAM: Glycoside hydrolase 97; SPTR:  uncharacterized protein
YP_004775809.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: fjo:Fjoh_4919 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxylase
YP_004775810.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001451; KEGG: zpr:ZPR_2553 transferase, LpxA family; SPTR: Transferase, LpxA family
YP_004775811.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fba:FIC_01412 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: Cyclic nucleotide-binding; SPTR:  transcriptional regulator, Crp/Fnr family
YP_004775812.1	KEGG: ppn:Palpr_0452 hypothetical protein; SPTR:  uncharacterized protein
YP_004775813.1	PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase
YP_004775815.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: lby:Lbys_3373 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter
YP_004775816.1	PFAM: ADP-ribosylglycohydrolase; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylglycohydrolase superfamily
YP_004775817.1	PFAM: Phosphotransferase enzyme family; COGs: COG4857 kinase; InterPro IPR002575; KEGG: rbi:RB2501_08800 hypothetical protein; PFAM: Aminoglycoside phosphotransferase; SPTR:  phosphotransferase enzyme family protein
YP_004775818.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; SPTR: D-lactate dehydrogenase (Cytochrome)
YP_004775819.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR013249:IPR014284; KEGG: cpi:Cpin_1095 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70
YP_004775820.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2262 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004775821.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2261 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004775822.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_0798 sulfatase; PFAM: Sulfatase; SPTR:  uncharacterized protein
YP_004775823.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775824.1	PFAM: Cytochrome c; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: sli:Slin_4672 PKD domain containing protein; PFAM: Cytochrome c, class I; SPTR: Transcriptional regulator, Crp/Fnr family
YP_004775825.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1379 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775826.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR000627:IPR012910:IPR000531; KEGG: dfe:Dfer_1380 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Intradiol ring-cleavage dioxygenase, C-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004775827.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cly:Celly_2996 anti-FecI sigma factor FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004775828.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007630:IPR014284; KEGG: sli:Slin_3388 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 4; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004775829.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_0804 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004775830.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0714 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004775831.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_0713 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004775832.1	PFAM: FAD binding domain; InterPro IPR003953; KEGG: dfe:Dfer_0712 FAD dependent oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: FAD dependent oxidoreductase
YP_004775833.1	KEGG: dfe:Dfer_0711 hypothetical protein; SPTR:  uncharacterized protein
YP_004775834.1	PFAM: Heparinase II/III-like protein; KEGG: heparinase II/III family protein; SPTR:  uncharacterized protein
YP_004775835.1	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: psn:Pedsa_2729 protein of unknown function DUF820; PFAM: Protein of unknown function DUF820; SPTR:  uncharacterized protein
YP_004775836.1	PFAM: Aminotransferase class-V; TIGRFAM: uncharacterized pyridoxal phosphate-dependent enzyme; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR000192; KEGG: sus:Acid_6148 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Selenocysteine synthase (Seryl-tRNASer selenium transferase)-like protein
YP_004775837.1	PFAM: ASPIC and UnbV; InterPro IPR013517; KEGG: zpr:ZPR_2446 FG-GAP repeat-containing protein; PFAM: FG-GAP; SPTR: FG-GAP repeat-containing protein
YP_004775838.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_1899 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004775839.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1900 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane receptor proteins, mostly Fe transport
YP_004775840.1	KEGG: pbs:Plabr_1908 hypothetical protein; SPTR:  uncharacterized protein
YP_004775841.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psn:Pedsa_0059 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004775842.1	PFAM: Protein of unknown function DUF88; InterPro IPR002790; KEGG: gfo:GFO_1754 hypothetical protein; PFAM: Protein of unknown function DUF88; SPTR: Protein containing DUF88
YP_004775843.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR003661:IPR003594; KEGG: mtt:Ftrac_0407 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase
YP_004775844.1	PFAM: Protein of unknown function (DUF445); COGs: COG2733 membrane protein; InterPro IPR007383; KEGG: lhk:LHK_03015 hypothetical protein; PFAM: Protein of unknown function DUF445, transmembrane; SPTR: DUF445 domain containing protein
YP_004775845.1	PFAM: Endonuclease/Exonuclease/phosphatase; InterPro IPR005135; KEGG: cse:Cseg_1208 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase
YP_004775846.1	PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: lby:Lbys_0011 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR:  secreted protein
YP_004775847.1	PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR004193:IPR006047:IPR006048:IPR006589; KEGG: chu:CHU_1345 glycogen branching protein; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Candidate glycogen branching enzyme, glycoside hydrolase 13 protein
YP_004775848.1	PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: rbi:RB2501_02685 potassium transporter peripheral membrane component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR:  Trk system potassium uptake protein TrkA
YP_004775849.1	PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: cao:Celal_2250 cation transporter; PFAM: Cation transporter; SPTR: Trk system potassium uptake protein TrkH
YP_004775850.1	PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family; COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: mtt:Ftrac_0865 phenazine biosynthesis phzc/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: Phenazine biosynthesis PhzC/PhzF protein
YP_004775851.1	PFAM: Amino acid kinase; TIGRFAM: carbamate kinase; acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048:IPR004662; KEGG: mae:Maeo_0127 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase
YP_004775852.1	PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR005814:IPR004636; KEGG: mfs:MFS40622_1451 acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; SPTR: Acetylornithine transaminase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase
YP_004775853.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; InterPro IPR000534:IPR012280:IPR000706; KEGG: aar:Acear_1552 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase 2; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase
YP_004775854.1	PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); HAMAP: Arginine biosynthesis protein ArgJ; InterPro IPR002813; KEGG: chy:CHY_2264 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; PFAM: Arginine biosynthesis protein ArgJ; SPTR: Glutamate N-acetyltransferase/amino-acid acetyltransferase; TIGRFAM: Arginine biosynthesis protein ArgJ
YP_004775856.1	PFAM: Cytochrome c; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: dfe:Dfer_2444 hypothetical protein; PFAM: Cytochrome c, class I; SPTR:  uncharacterized protein
YP_004775857.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: mtt:Ftrac_3244 orn/dap/arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Arginine decarboxylase, biosynthetic
YP_004775858.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Tetratricopeptide repeat; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR001440:IPR003661:IPR003594:IPR019734; KEGG: dfe:Dfer_1606 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide TPR-1; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Tetratricopeptide repeat; SPTR: Integral membrane sensor signal transduction histidine kinase
YP_004775859.1	PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: shg:Sph21_4749 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR:  uncharacterized protein
YP_004775860.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_4748 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Membrane protein
YP_004775861.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_4747 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004775862.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: dfe:Dfer_3392 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR:  type I phosphodiesterase / nucleotide pyrophosphatase
YP_004775863.1	PFAM: Domain of unknown function (DUF1083); KEGG:  membrane associated hydrolase; SPTR:  uncharacterized protein
YP_004775864.1	KEGG: dfe:Dfer_4312 two component regulator propeller domain protein; SPTR: Two component regulator propeller domain protein
YP_004775865.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_2943 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR:  transcriptional regulator
YP_004775866.1	PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: mtt:Ftrac_0952 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase
YP_004775867.1	PFAM: Protein of unknown function (DUF779); COGs: COG3564 conserved hypothetical protein; InterPro IPR008497; KEGG: mtt:Ftrac_0951 hypothetical protein; PFAM: Protein of unknown function DUF779; SPTR: UDP-glucose 4-epimerase
YP_004775868.1	PFAM: Amidohydrolase; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: mtt:Ftrac_3125 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase 3
YP_004775869.1	KEGG: rbi:RB2501_07715 hypothetical protein; SPTR: Antibiotic biosynthesis monooxygenase domain protein
YP_004775870.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: cytochrome bd ubiquinol oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR:  cytochrome bd-I oxidase subunit I
YP_004775871.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR:  cytochrome bd-I oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_004775872.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: npu:Npun_R6059 SMP-30/gluconolaconase/LRE domain-containing protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: SMP-30/Gluconolaconase/LRE domain protein
YP_004775873.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: acm:AciX9_3790 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing protein
YP_004775874.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rbi:RB2501_01216  arylsulfatase; PFAM: Sulfatase; SPTR:  arylsulfatase
YP_004775875.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_05235  secreted sulfatase YdeN; PFAM: Sulfatase; SPTR:  secreted sulfatase ydeN
YP_004775876.1	PFAM: Citrate transporter; TrkA-C domain; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: dol:Dole_1094 TrkA domain-containing protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR: TrkA-C domain protein
YP_004775877.1	PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090:IPR002655; KEGG: mtt:Ftrac_1371 acyl-CoA oxidase domain-containing protein; PFAM: Acyl-CoA oxidase, C-terminal; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; SPTR: Acyl-CoA oxidase domain-containing protein
YP_004775878.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: shg:Sph21_0204 amino acid carrier protein; PFAM: Sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: Sodium:alanine symporter
YP_004775879.1	COGs: COG2996 conserved hypothetical protein; KEGG: dfe:Dfer_5129 RNA binding S1 domain protein; SPTR: YitL protein
YP_004775880.1	PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: lby:Lbys_2938 rok family protein; PFAM: ROK; SPTR: Glucokinase
YP_004775881.1	KEGG: sli:Slin_5550 hypothetical protein; SPTR:  uncharacterized protein
YP_004775882.1	KEGG: sus:Acid_3712 hypothetical protein; SPTR:  uncharacterized protein
YP_004775883.1	PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: shg:Sph21_3633 transcriptional regulator, TetR family; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: TetR family transcriptional regulator Member
YP_004775884.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cat:CA2559_10068 secretion protein HlyD; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD
YP_004775885.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: zpr:ZPR_0292 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family membrane transporter; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1
YP_004775886.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: zpr:ZPR_0291 OprM-like outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: OprM-like outer membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT
YP_004775887.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004775888.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR:  two-component system sensor but no kinase domain
YP_004775889.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_05435 two-component system response regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator protein
YP_004775890.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: gfo:GFO_1721 secreted protein containing DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Secreted protein containing DUF1080
YP_004775891.1	PFAM: Sulfate transporter family; Carbonic anhydrase; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR001765; KEGG: lbf:LBF_1643 bifunctional permease/carbonic anhydrase; PFAM: Sulphate transporter; Carbonic anhydrase; SPTR:  permease, MFS superfamily; sulfate transporter; membrane protein; signal peptide
YP_004775892.1	PFAM: isoform II; COGs: COG4188 dienelactone hydrolase; InterPro IPR005065; KEGG: sli:Slin_3493 dienelactone hydrolase-like protein; PFAM: Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II; SPTR: Dienelactone hydrolase-like protein
YP_004775893.1	KEGG: bfr:BF1472 hypothetical protein; SPTR:  uncharacterized protein
YP_004775894.1	PFAM: CBS domain; Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644; KEGG: cpi:Cpin_0552 chloride channel core; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Voltage-gated family Cl-channel
YP_004775895.1	PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: chu:CHU_3466 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; SPTR: Antioxidant protein LsfA
YP_004775896.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751:IPR013747; KEGG: ppn:Palpr_1842 beta-ketoacyL-AcyL-carrier-protein synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; SPTR: Beta-ketoacyl-acyl-carrier-protein synthase III
YP_004775897.1	PFAM: Amidohydrolase; COGs: COG3618 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: gfo:GFO_1704 amidohydrolase; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase
YP_004775898.1	PFAM: Domain of unknown function (DUF718); InterPro IPR008000; KEGG: dfe:Dfer_5741 protein of unknown function DUF718; PFAM: Rhamnose mutarotase; SPTR:  uncharacterized protein
YP_004775899.1	PFAM: Receptor L domain; InterPro IPR000494; KEGG: zpr:ZPR_1515 leucine-rich protein; PFAM: EGF receptor, L domain; SPTR:  uncharacterized protein
YP_004775900.1	PFAM: Receptor L domain; KEGG: cao:Celal_3252 epidermal growth-factor receptor (egfr) l domain protein; SPTR: Maf-like protein
YP_004775901.1	PFAM: Methyltransferase domain; KEGG: lic:LIC11062 hypothetical protein; SPTR: Methyltransferase
YP_004775902.1	PFAM: NAD(P) transhydrogenase beta subunit; COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR004003; KEGG: NAD(P)(+) transhydrogenase; PFAM: NAD(P) transhydrogenase, beta subunit; SPTR: NAD(P) transhydrogenase subunit beta
YP_004775903.1	COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: cpi:Cpin_6490 pyridine nucleotide transhydrogenase subunit alpha; SPTR: Pyridine nucleotide transhydrogenase subunit alpha
YP_004775904.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR007886:IPR007698; KEGG: cpi:Cpin_6491 NAD(P)(+) transhydrogenase (AB-specific); PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; SPTR: NAD(P)(+) transhydrogenase (AB-specific)
YP_004775905.1	KEGG: fbc:FB2170_08859  acetyl xylan esterase; SPTR: Probable acetyl xylan esterase
YP_004775906.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: bch:Bcen2424_6032 dihydrokaempferol 4-reductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase
YP_004775907.1	InterPro IPR001236; KEGG: bwe:BcerKBAB4_0840 hypothetical protein; PFAM: Lactate/malate dehydrogenase; SPTR:  uncharacterized protein
YP_004775908.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005:IPR018060; KEGG: cat:CA2559_10093  AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004775909.1	KEGG: nca:Noca_4903 hypothetical protein; SPTR:  uncharacterized protein
YP_004775910.1	KEGG: zpr:ZPR_3965 hypothetical protein; SPTR: Membrane protein
YP_004775911.1	PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: zpr:ZPR_3966 cyclic nucleotide-binding domain protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein
YP_004775912.1	PFAM: Domain of unknown function (DU1801); KEGG: mtt:Ftrac_2345 hypothetical protein; SPTR:  uncharacterized protein
YP_004775913.1	PFAM: Bacterial transcription activator, effector binding domain; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: cpi:Cpin_2865 transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding; SPTR: Bacterial regulatory protein, DeoR family
YP_004775914.1	PFAM: HTH domain; COGs: COG2378 transcriptional regulator protein; InterPro IPR013196; KEGG: cly:Celly_2188 DeoR family transcriptional regulator; SPTR: DeoR family transcriptional regulator
YP_004775915.1	PFAM:  neutral zinc metallopeptidase; COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: cao:Celal_0411 hypothetical protein; PFAM: Protein of unknown function, zinc metallopeptidase SPTR:  uncharacterized protein
YP_004775916.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cao:Celal_0191 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Probable tonB-dependent receptor
YP_004775917.1	PFAM: Protein of unknown function (DUF890); COGs: COG3129 SAM-dependent methyltransferase; HAMAP: Ribosomal RNA large subunit methyltransferase F; InterPro IPR010286:IPR016909; KEGG: fba:FIC_01717  SAM-dependent methyltransferase; PFAM: S-adenosyl-L-methionine dependent methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase F
YP_004775918.1	PFAM: SpoU rRNA Methylase; TIGRFAM: rRNA methylase, , group 2; COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: fbc:FB2170_16826 RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR:  tRNA (cytidine/uridine-2'-O-)-methyltransferase KAOT1_11141
YP_004775919.1	SPTR:  uncharacterized protein
YP_004775920.1	SPTR:  uncharacterized protein
YP_004775921.1	PFAM: Peptidyl-tRNA hydrolase PTH2; KEGG: hch:HCH_06839 hypothetical protein; SPTR:  uncharacterized protein
YP_004775922.1	PFAM: Redoxin; KEGG: mtt:Ftrac_0384 hypothetical protein; SPTR:  uncharacterized protein
YP_004775923.1	SPTR:  uncharacterized protein
YP_004775924.1	KEGG: rba:RB10999 cycloinulo-oligosaccharide fructanotransferase; SPTR: Cycloinulo-oligosaccharide fructanotransferase
YP_004775925.1	PFAM: Di-glucose binding within endoplasmic reticulum; Carbohydrate binding domain; InterPro IPR006626:IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR:  uncharacterized protein; TIGRFAM: parallel beta-helix repeat containing protein
YP_004775926.1	PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator; COGs: COG3228 conserved hypothetical protein; InterPro IPR010384; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF980; SPTR:  uncharacterized protein
YP_004775928.1	PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: lby:Lbys_0705 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein
YP_004775930.1	PFAM: CHRD domain; InterPro IPR010895; KEGG: CHRD domain-containing protein; PFAM: CHRD; SMART: CHRD; SPTR:  uncharacterized protein
YP_004775931.1	KEGG: ran:Riean_0154 hypothetical protein; SPTR:  uncharacterized protein
YP_004775932.1	KEGG: pjd:Pjdr2_0506 hypothetical protein; SPTR:  uncharacterized protein
YP_004775933.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: osp:Odosp_0005 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR:  uncharacterized protein
YP_004775934.1	SPTR:  uncharacterized protein
YP_004775935.1	PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: cja:CJA_3670 hypothetical protein; SPTR:  uncharacterized protein
YP_004775936.1	KEGG: fbc:FB2170_13016 hypothetical protein; SPTR:  uncharacterized protein
YP_004775938.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR013027:IPR006076; KEGG: dfe:Dfer_0712 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase
YP_004775939.1	KEGG: dfe:Dfer_0711 hypothetical protein; SPTR:  uncharacterized protein
YP_004775940.1	PFAM: MORN repeat variant; COGs: COG2849 conserved hypothetical protein; KEGG: cao:Celal_4097 MORN variant repeat-containing protein; SPTR: MORN variant repeat-containing protein
YP_004775941.1	KEGG: cly:Celly_2852 hypothetical protein; SPTR:  uncharacterized protein
YP_004775942.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1548 sulfatase; PFAM: Sulfatase; SPTR:  sulfatase
YP_004775943.1	PFAM: Dienelactone hydrolase; COGs: COG0412 Dienelactone hydrolase; InterPro IPR019734:IPR013105; KEGG: fbc:FB2170_12996 beta-lactamase; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR:  uncharacterized protein
YP_004775944.1	PFAM: Nitroreductase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cao:Celal_3973 dihydropteridine reductase; PFAM: Nitroreductase-like; SPTR: Oxygen-insensitive NAD(P)H nitroreductase
YP_004775945.1	PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: fjo:Fjoh_0113 HxlR family transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator
YP_004775946.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775947.1	PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein
YP_004775948.1	PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; InterPro IPR000086; KEGG: NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: MutT/NUDIX family protein
YP_004775949.1	InterPro IPR001258; KEGG: dvi:Dvir_GJ18454 GJ18454 gene product from transcript GJ18454-RA; PFAM: NHL repeat; SPTR:  surface layer protein
YP_004775952.1	KEGG: dfe:Dfer_0778 hypothetical protein; SPTR:  uncharacterized protein
YP_004775953.1	PFAM: Cyclic nucleotide-binding domain; KEGG: dfe:Dfer_0777  transcriptional regulator, Crp/Fnr family; SPTR:  transcriptional regulator, Crp/Fnr family
YP_004775954.1	PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: dsy:DSY4606 hypothetical protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR:  uncharacterized protein
YP_004775955.1	PFAM: Predicted permease; COGs: COG0701 permease; InterPro IPR005524; KEGG: dsy:DSY4605 hypothetical protein; PFAM: Protein of unknown function DUF318, transmembrane; SPTR:  uncharacterized protein
YP_004775956.1	PFAM: CBS domain; Domain of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644; KEGG: rmr:Rmar_0830 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; SPTR: CBS domain protein
YP_004775957.1	PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001:IPR001650:IPR000330; KEGG: caa:Caka_2007 SNF2-related protein; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: SNF2-related protein
YP_004775958.1	PFAM: DHH family; DHHA1 domain; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: chu:CHU_2395 hypothetical protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR:  uncharacterized protein
YP_004775959.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: mev:Metev_0374 histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Histidine kinase
YP_004775960.1	PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310:IPR012309; KEGG: dsh:Dshi_2589 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase, central; ATP dependent DNA ligase, C-terminal; SPTR: DNA ligase
YP_004775961.1	PFAM: Metallo-beta-lactamase superfamily; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004775962.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: shg:Sph21_0683 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase domain protein
YP_004775963.1	PFAM: DoxX; InterPro IPR011637; KEGG: chu:CHU_1111 hypothetical protein; PFAM: DoxX; SPTR:  uncharacterized protein
YP_004775964.1	PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: chu:CHU_3624 hypothetical protein; PFAM: Helix-turn-helix, HxlR type; SPTR:  uncharacterized protein
YP_004775965.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; COGs: COG2957 Peptidylarginine deiminase; InterPro IPR007466; KEGG: zpr:ZPR_2018 agmatine deiminase; PFAM: Peptidyl-arginine deiminase, Porphyromonas-type; SPTR: Agmatine deiminase
YP_004775966.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: zpr:ZPR_2019 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004775967.1	KEGG: cao:Celal_2164 hypothetical protein; SPTR:  uncharacterized protein
YP_004775968.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase, NAD-binding Rossmann fold protein
YP_004775969.1	PFAM: Pectic acid lyase; TIGRFAM: pectate lyase, PelA/Pel-15E family; InterPro IPR012669; KEGG: pbs:Plabr_0264 pectic acid lyase; PFAM: Pectic acid lyase; SPTR:  uncharacterized protein
YP_004775970.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_3154 membrane protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004775971.1	PFAM: PKD domain; InterPro IPR000601; KEGG: lby:Lbys_0384 hypothetical protein; PFAM: PKD; SPTR:  uncharacterized protein
YP_004775972.1	PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific  membrane protein; InterPro IPR019861; KEGG: mtt:Ftrac_3154 membrane protein; SPTR: Bacteroidetes-specific membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes
YP_004775973.1	PFAM: PKD domain; InterPro IPR000601; KEGG: lby:Lbys_0384 hypothetical protein; PFAM: PKD; SMART: PKD; SPTR:  uncharacterized protein
YP_004775975.1	PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006103; KEGG: shg:Sph21_0596 glycoside hydrolase 2 sugar binding protein; PFAM: Glycoside hydrolase 2, carbohydrate-binding; Glycoside hydrolase 2, TIM barrel; SPTR: Glycosyl hydrolase, family 2
YP_004775976.1	PFAM: Aldose 1-epimerase; TIGRFAM: galactose mutarotase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: cpi:Cpin_0489 aldose 1-epimerase; PFAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase
YP_004775977.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: rbi:RB2501_12567 gluconolactonase (precursor); PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: Gluconolactonase (Precursor)
YP_004775978.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: geranylgeranyl reductase; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR006076:IPR011777; KEGG: pca:Pcar_1376 dehydrogenase, flavoprotein containing; PFAM: FAD dependent oxidoreductase; SPTR: Dehydrogenase, flavoprotein containing; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic
YP_004775979.1	SPTR:  uncharacterized protein
YP_004775980.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; COGs: COG0269 3-hexulose-6-phosphate synthase and related protein; InterPro IPR001754; KEGG: rba:RB5319 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hps-1); PFAM: Orotidine 5'-phosphate decarboxylase, core; SPTR: D-arabino 3-hexulose 6-phosphate formaldehyde lyase
YP_004775981.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: rba:RB5320 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Probable zinc-type alcohol dehydrogenase
YP_004775982.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cbc:CbuK_1138 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase
YP_004775983.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB5321 myo-inositol catabolism protein IolH; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2
YP_004775984.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: pdi:BDI_3345 regucalcin-like protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; SPTR: Regucalcin (RC)
YP_004775985.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_12076  dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable dehydrogenase
YP_004775986.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: phe:Phep_1607 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004775987.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: dfe:Dfer_1403 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase
YP_004775988.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR004155:IPR013427; KEGG: plm:Plim_1436 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  haem-binding region
YP_004775989.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: acm:AciX9_3799 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004775990.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004775991.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: sli:Slin_3957 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; SPTR: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
YP_004775992.1	PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; InterPro IPR010386; KEGG: mtt:Ftrac_0221 tRNA-hydroxylase; PFAM: tRNA--hydroxylase; SPTR: tRNA-hydroxylase
YP_004775993.1	PFAM: Glycosyl transferase 2; KEGG: mtt:Ftrac_0219 glycosyl transferase 2; SPTR:  uncharacterized protein
YP_004775994.1	KEGG: sli:Slin_0582 hypothetical protein; SPTR:  uncharacterized protein
YP_004775997.1	KEGG: cpi:Cpin_1999 hypothetical protein; SPTR:  uncharacterized protein
YP_004775998.1	PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; InterPro IPR000583:IPR001347:IPR005855; KEGG: cpi:Cpin_2000 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; SPTR: Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising
YP_004775999.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: cpi:Cpin_2602 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004776000.1	KEGG: fbc:FB2170_06070  hydrolase lipoprotein; SPTR:  hydrolase lipoprotein
YP_004776001.1	COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: fbc:FB2170_06080 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR:  uncharacterized protein
YP_004776002.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: phe:Phep_0775 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family
YP_004776003.1	PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: bbe:BBR47_25560 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004776004.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004812; KEGG: sli:Slin_3348 drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily
YP_004776005.1	PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; PKD domain; Ig domain; InterPro IPR006652:IPR000601:IPR008009; KEGG: fbc:FB2170_10111 hypothetical protein; PFAM: PKD; Ig; Kelch repeat type 1; SMART: PKD; Kelch repeat type 1; SPTR:  secreted protein
YP_004776006.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837:IPR004481; KEGG: zpr:ZPR_3943 sodium/calcium exchanger protein; PFAM: Sodium/calcium exchanger membrane region; SPTR: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like
YP_004776008.1	PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: tra:Trad_0962 bifunctional deaminase-reductase domain-containing protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Bifunctional deaminase-reductase domain protein
YP_004776009.1	KEGG: cph:Cpha266_2258 hypothetical protein; SPTR:  uncharacterized protein
YP_004776010.1	KEGG: cph:Cpha266_2257 hypothetical protein; SPTR:  uncharacterized protein
YP_004776011.1	PFAM: RES domain; InterPro IPR014914; KEGG: cph:Cpha266_2256 hypothetical protein; PFAM: RES; SPTR:  uncharacterized protein
YP_004776013.1	PFAM: MORN repeat variant; InterPro IPR011652; KEGG: chu:CHU_2455 glucosyltransferase-S; SPTR: Morn repeat-containing protein
YP_004776014.1	PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: dal:Dalk_5030 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A
YP_004776016.1	TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428:IPR013427; KEGG: sli:Slin_4779 dehydrogenase; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004776017.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: dfe:Dfer_1374 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family
YP_004776018.1	SPTR:  uncharacterized protein
YP_004776019.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: mtt:Ftrac_3076 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein
YP_004776020.1	PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sli:Slin_3469 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase
YP_004776023.1	TIGRFAM: conserved hypothetical protein; InterPro IPR011944; KEGG: sus:Acid_5517 alpha/beta hydrolase domain-containing protein; SPTR:  uncharacterized protein
YP_004776024.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: fba:FIC_01886 4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase; SPTR: KDPG and KHG aldolase; TIGRFAM: KDPG/KHG aldolase
YP_004776025.1	PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family; COGs: COG2731 Beta-galactosidase beta subunit; InterPro IPR004375; KEGG: fba:FIC_01887 conserved hypothetical protein 22; PFAM: Conserved hypothetical protein CHP00022; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00022
YP_004776026.1	PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: tjr:TherJR_2254 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: PfkB domain protein
YP_004776027.1	PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: vpr:Vpar_0391 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR:  polysaccharide deacetylase
YP_004776028.1	PFAM: Protein of unknown function (DUF1456); COGs: COG4807 conserved hypothetical protein; InterPro IPR009921; KEGG: ppr:PBPRA2338 hypothetical protein; PFAM: Protein of unknown function DUF1456; SPTR: YehS
YP_004776029.1	PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Possible ketoacyl reductase
YP_004776030.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004776032.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: mtt:Ftrac_1212 hypothetical protein; SPTR:  uncharacterized protein
YP_004776033.1	PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable FMN-dependent enzyme, DR_2398 family; COGs: COG3576 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; InterPro IPR011576; KEGG: bcq:BCQ_1955 phosphohydrolase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
YP_004776034.1	InterPro IPR004843; KEGG: fbc:FB2170_02085 hypothetical protein; PFAM: Metallophosphoesterase; SPTR:  uncharacterized protein
YP_004776035.1	PFAM: F5/8 type C domain; Cytochrome c; InterPro IPR000421; KEGG: rbi:RB2501_04230 hypothetical protein; PFAM: Coagulation factor 5/8 type, C-terminal; SPTR: L-sorbosone dehydrogenase
YP_004776036.1	PFAM: Amidohydrolase; InterPro IPR006992; KEGG: cak:Caul_0314 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004776037.1	PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: sli:Slin_6146 fatty acid hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Fatty acid hydroxylase
YP_004776038.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: cao:Celal_2520 L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: L-threonine 3-dehydrogenase
YP_004776040.1	PFAM: short chain dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cly:Celly_0409 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 2-deoxy-D-gluconate 3-dehydrogenase
YP_004776042.1	COGs: COG5616 integral membrane protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_1305 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776043.1	PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mtt:Ftrac_2931 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region
YP_004776044.1	KEGG: mtt:Ftrac_2930 hypothetical protein; SPTR:  uncharacterized protein
YP_004776045.1	PFAM: Glycosyl hydrolases family 43; KEGG: cly:Celly_0406 glycosyl hydrolase 32 domain-containing protein; SPTR: 3,6-anhydro-alpha-L-galactosidase
YP_004776046.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG1062 Zn-dependent alcohol dehydrogenase class III; InterPro IPR013154:IPR013149; KEGG: gfo:GFO_1717 zinc-type alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Zinc-type alcohol dehydrogenase
YP_004776047.1	PFAM:  esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: gfo:GFO_1718 acetylesterase; PFAM:  esterase; SPTR: Acetylesterase
YP_004776048.1	COGs: COG5499 transcription regulator containing HTH domain; KEGG: dal:Dalk_4292 transcription regulator with HTH domain; SPTR:  transcription regulator with HTH domain
YP_004776049.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: xne:XNC1_1350 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR:  membrane protein
YP_004776050.1	KEGG: shg:Sph21_5039 hypothetical protein; SPTR:  uncharacterized protein
YP_004776051.1	KEGG: zpr:ZPR_1581 hypothetical protein; SPTR:  uncharacterized protein
YP_004776052.1	PFAM: Di-haem cytochrome c peroxidase; COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: dfe:Dfer_0101 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; SPTR: Cytochrome-c peroxidase
YP_004776053.1	COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_6093 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776054.1	KEGG: cpi:Cpin_6094 hypothetical protein; SPTR:  uncharacterized protein
YP_004776055.1	PFAM: XdhC and CoxI family; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: cpi:Cpin_4137 xanthine dehydrogenase; PFAM: XdhC- CoxI; SPTR: Xanthine dehydrogenase
YP_004776056.1	PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111:IPR020817; KEGG: molybdenum cofactor synthesis domain-containing protein; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis MoeA protein; TIGRFAM: Molybdenum cofactor synthesis
YP_004776057.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR006638:IPR007197:IPR010505:IPR013483; KEGG: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A
YP_004776058.1	PFAM: MoaE protein; COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: fbc:FB2170_09356 molybdopterin (MPT) converting factor subunit 2; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin (MPT) converting factor, subunit 2
YP_004776059.1	PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; InterPro IPR003749; KEGG: zpr:ZPR_2976 hypothetical protein; PFAM: ThiamineS; SPTR:  uncharacterized protein
YP_004776060.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: bvu:BVU_0109 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004776061.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_1919 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004776062.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1413 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776063.1	KEGG: dfe:Dfer_1412 hypothetical protein; SPTR:  uncharacterized protein
YP_004776064.1	PFAM: HpcH/HpaI aldolase/citrate lyase; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: sli:Slin_1071 4-hydroxy-2-oxovalerate aldolase; PFAM: HpcH/HpaI aldolase; SPTR: 4-hydroxy-2-oxovalerate aldolase
YP_004776065.1	PFAM: GntP family permease; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: sli:Slin_1070 gluconate transporter; PFAM: Gluconate transporter; SPTR: Gluconate transporter
YP_004776066.1	PFAM: D-mannonate dehydratase (UxuA); COGs: COG1312 D-mannonate dehydratase; InterPro IPR004628:IPR006311; KEGG: dfe:Dfer_1408 mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase
YP_004776067.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115:IPR006398; KEGG: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; SPTR: 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_004776068.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: sli:Slin_1068 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Mandelate racemase/muconate lactonizing protein
YP_004776069.1	PFAM: Demethylmenaquinone methyltransferase; KEGG: sli:Slin_6192 demethylmenaquinone methyltransferase-like protein; SPTR:  uncharacterized protein
YP_004776070.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR006311; KEGG: sli:Slin_6193 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Starvation sensing protein
YP_004776071.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342:IPR006311; KEGG: Mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SPTR: Galactonate dehydratase
YP_004776072.1	PFAM: Demethylmenaquinone methyltransferase; COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: dfe:Dfer_1105 demethylmenaquinone methyltransferase-like protein; SPTR: Demethylmenaquinone methyltransferase-like protein
YP_004776073.1	PFAM: PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR001610:IPR013767:IPR013655; KEGG: mtt:Ftrac_0408 pas/pac sensor signal transduction histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAS; PAC motif; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004776074.1	PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014:IPR013655:IPR013767; KEGG: fjo:Fjoh_4936 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAS; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004776075.1	KEGG: cpi:Cpin_1191 hypothetical protein; SPTR:  uncharacterized protein
YP_004776076.1	PFAM: DnaJ C terminal region; DnaJ domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623:IPR002939; KEGG: shg:Sph21_0783 chaperone DnaJ domain protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: DnaJ family protein
YP_004776077.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776078.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594; KEGG: fbc:FB2170_07824  two-component system sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR:  two-component system sensor histidine kinase
YP_004776079.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: cly:Celly_1175 fis family two component sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family
YP_004776080.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_07834  outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR:  outer membrane transport/efflux protein
YP_004776081.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_07839 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, MFP component, RND family protein; TIGRFAM: Secretion protein HlyD
YP_004776082.1	PFAM: ABC transporter; TIGRFAM:  bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_07844 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein
YP_004776083.1	PFAM: Predicted permease; InterPro IPR003838; KEGG: gfo:GFO_0712 FtsX family membrane protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: FtsX family membrane protein (Predicted permease)
YP_004776084.1	PFAM: Predicted permease; InterPro IPR003838; KEGG: fbc:FB2170_07854 ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, permease
YP_004776085.1	PFAM: Predicted permease; InterPro IPR003838; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004776086.1	PFAM: Predicted permease; InterPro IPR003838; KEGG: cly:Celly_1165 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004776087.1	PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sli:Slin_0947 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004776088.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cly:Celly_1164 phosphonate-transporting ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Phosphonate-transporting ATPase
YP_004776090.1	PFAM: Sulfate transporter family; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: fjo:Fjoh_4764 sulphate transporter; PFAM: Sulphate transporter; SPTR: Sulphate transporter
YP_004776091.1	PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: psn:Pedsa_2030 carbonic anhydrase; PFAM: Carbonic anhydrase; SPTR: Carbonic anhydrase
YP_004776093.1	KEGG: mtt:Ftrac_2737 hypothetical protein; SPTR:  uncharacterized protein
YP_004776094.1	PFAM: BNR/Asp-box repeat; KEGG: mbr:MONBRDRAFT_22941 hypothetical protein; SPTR:  uncharacterized protein
YP_004776095.1	InterPro IPR006626; KEGG: fbc:FB2170_02135 hypothetical protein; SPTR:  uncharacterized protein
YP_004776096.1	KEGG: cts:Ctha_0375 hypothetical protein; SPTR:  uncharacterized protein
YP_004776097.1	KEGG: lby:Lbys_3377 hypothetical protein; SPTR:  uncharacterized protein
YP_004776098.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1904 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776099.1	KEGG: lby:Lbys_3377 hypothetical protein; SPTR:  uncharacterized protein
YP_004776100.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1904 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776102.1	PFAM: Glycosyl hydrolases family 43; KEGG: fbc:FB2170_02105 hypothetical protein; SPTR:  uncharacterized protein
YP_004776103.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ccb:Clocel_0960 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Two-component system sensor histidine kinase
YP_004776104.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: ttu:TERTU_3750 glycoside hydrolase 3 domain-containing protein; PFAM: Lipase, GDSL; SPTR: Glycoside hydrolase 3 domain protein
YP_004776105.1	PFAM: PA domain; Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: mtt:Ftrac_1481 peptidase M28; PFAM: Peptidase M28; SPTR:  peptidase, M28 (Aminopeptidase S) family
YP_004776106.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: sfr:Sfri_1262 pseudouridylate synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase
YP_004776107.1	PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR018318:IPR004506; KEGG: zpr:ZPR_2921 tRNA methyl transferase; PFAM: tRNA methyl transferase-like; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase
YP_004776108.1	PFAM: Shikimate kinase; 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase; 6-phosphogluconate dehydrogenase, decarboxylating; COGs: COG0362 6-phosphogluconate dehydrogenase; InterProIPR000623:IPR006115:IPR006114:IPR006001:IPR 006113; KEGG: chu:CHU_1404 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; Shikimate kinase; SPTR: 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; Carbohydrate kinase, thermoresistant glucokinase
YP_004776109.1	InterPro IPR006311
YP_004776110.1	COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: lic:LIC11509 cytoplasmic membrane protein; PFAM: PepSY-associated TM helix; SPTR: Membrane protein
YP_004776111.1	PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010105; KEGG: zpr:ZPR_0148 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_004776112.1	KEGG: chu:CHU_2806 hypothetical protein; SPTR:  uncharacterized protein
YP_004776113.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cpi:Cpin_0610 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004776114.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR000089:IPR006143; KEGG: shg:Sph21_1696 efflux transporter, RND family, MFP subunit; PFAM: Biotin/lipoyl attachment; SPTR:  auxiliary transport protein, membrane fusion protein (MFP) family; TIGRFAM: Secretion protein HlyD
YP_004776115.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: shg:Sph21_1695 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Efflux transporter, AcrB/AcrD/AcrF family, inner membrane component
YP_004776116.1	SPTR:  uncharacterized protein
YP_004776117.1	PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_0440 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004776118.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004776119.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01926 arylsulphatase A; PFAM: Sulfatase; SPTR: Arylsulphatase A
YP_004776120.1	PFAM: Polysaccharide lyase 8, N terminal alpha-helical domain; Polysaccharide lyase 8, super-sandwich domain; Polysaccharide lyase 8, C-terminal beta-sandwich domain; InterPro IPR012970:IPR003159:IPR004103; KEGG: phe:Phep_0786 polysaccharide lyase 8; PFAM: Polysaccharide lyase 8, central domain; Polysaccharide lyase 8, N-terminal alpha-helical; Polysaccharide lyase 8, C-terminal; SPTR:  uncharacterized protein
YP_004776121.1	PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: gfo:GFO_1581 membrane protein, UPF0118; PFAM: Uncharacterised protein family UPF0118; SPTR: Membrane protein, UPF0118
YP_004776122.1	KEGG: chu:CHU_1802 hypothetical protein; SPTR:  uncharacterized protein
YP_004776123.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: YdjC family protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase
YP_004776125.1	PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: mtt:Ftrac_2610 regulatory protein TetR; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein TetR
YP_004776126.1	KEGG: mtt:Ftrac_2611 hypothetical protein; SPTR:  uncharacterized protein
YP_004776127.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: mtt:Ftrac_2612 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein
YP_004776128.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2613 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004776129.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2614 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004776130.1	KEGG: mtt:Ftrac_2615 hypothetical protein; SPTR:  uncharacterized protein
YP_004776131.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_2613 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR:  uncharacterized protein
YP_004776132.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR003594:IPR011712; KEGG: chu:CHU_0106 membrane-associated sensory histidine kinase-like ATPase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: Membrane-associated sensory histidine kinase-like ATPase
YP_004776133.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: chu:CHU_0105 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family
YP_004776135.1	PFAM: Phospholipase A1; COGs: COG2829 Outer membrane phospholipase A; KEGG: pdi:BDI_0074 outer membrane phospholipase A; SPTR: Outer membrane phospholipase A
YP_004776136.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: rbi:RB2501_06065  outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Probable outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT
YP_004776137.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: hoh:Hoch_4863 efflux transporter RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004776138.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_06075  multidrug resistance protein; PFAM: Acriflavin resistance protein; SPTR: Probable multidrug resistance protein
YP_004776140.1	PFAM: CotH protein; COGs: COG5337 Spore coat assembly protein; InterPro IPR014867; KEGG: cao:Celal_3981 spore coat protein coth; PFAM: Spore coat protein CotH; SPTR: Spore coat protein CotH
YP_004776141.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: cyh:Cyan8802_2036 multiple antibiotic resistance (MarC)-related protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: Multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related
YP_004776142.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cao:Celal_4027 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR:  outer membrane lipoprotein
YP_004776143.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cao:Celal_4026 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR:  HlyD family secretion protein; TIGRFAM: Secretion protein HlyD
YP_004776144.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cao:Celal_4025 phosphonate-transporting atpase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR:  ABC transporter ATP-binding component
YP_004776145.1	PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cao:Celal_4024 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: ABC transporter, permease
YP_004776146.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: cao:Celal_4023 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Two-component sensor histidine kinase
YP_004776147.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: cao:Celal_4022 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component response regulator
YP_004776148.1	PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: mtt:Ftrac_0374 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2
YP_004776149.1	PFAM: Protein of unknown function (DUF2911); KEGG: mtt:Ftrac_0375 hypothetical protein; SPTR:  uncharacterized protein
YP_004776150.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; COGs: COG0523  GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: shg:Sph21_2587 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: Cobalamin (Vitamin B12) synthesis protein, CobW
YP_004776151.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776152.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776153.1	PFAM: CobN/Magnesium Chelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: bvu:BVU_2194 protoporphyrin IX magnesium chelatase; PFAM: CobN/magnesium chelatase; SPTR:  uncharacterized protein
YP_004776154.1	KEGG: osp:Odosp_1422 hypothetical protein; SPTR:  uncharacterized protein
YP_004776155.1	PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; KEGG: bth:BT_0492 integral membrane protein; SPTR: Integral membrane protein
YP_004776156.1	PFAM: Uncharacterized conserved protein (DUF2149); COGs: COG4744 conserved hypothetical protein; InterPro IPR018676; KEGG: bhl:Bache_3226 hypothetical protein; PFAM: Protein of unknown function DUF2149; SPTR:  uncharacterized protein
YP_004776157.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterPro IPR018391:IPR019551:IPR002372:IPR003088; KEGG: dfe:Dfer_1611 glycerol dehydrogenase (acceptor); PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; Cytochrome c, class I; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Glycerol dehydrogenase (Acceptor)
YP_004776158.1	PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: dfe:Dfer_3348 cytochrome c class I; SPTR: Cytochrome c class I
YP_004776159.1	PFAM: Domain of unknown function (DUF227); InterPro IPR015897:IPR004119; KEGG: mtt:Ftrac_0370 hypothetical protein; PFAM: Protein of unknown function DUF227; SMART: CHK kinase-like; SPTR:  uncharacterized protein
YP_004776160.1	PFAM: Inositol monophosphatase; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760; KEGG: mtt:Ftrac_0371 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol monophosphatase
YP_004776161.1	KEGG: dat:HRM2_21180 hypothetical protein; SPTR:  uncharacterized protein
YP_004776162.1	KEGG: dat:HRM2_21190 hypothetical protein; SPTR:  uncharacterized protein
YP_004776163.1	KEGG: dat:HRM2_21160 hypothetical protein; SPTR:  uncharacterized protein
YP_004776164.1	KEGG: fbc:FB2170_10111 hypothetical protein; SPTR:  secreted protein
YP_004776165.1	PFAM: Sel1 repeat; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: oaa:100084694 hypothetical protein LOC100084694; PFAM: Sel1-like; SMART: Sel1-like; SPTR: TPR repeat protein
YP_004776166.1	PFAM: Prolyl oligopeptidase; COGs: COG3458 Acetyl esterase (deacetylase); KEGG: psn:Pedsa_2279 acetyl xylan esterase; SPTR:  uncharacterized protein
YP_004776167.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: vfi:VF_0968 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase
YP_004776168.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: bco:Bcell_3957 beta-lactamase; PFAM: Beta-lactamase-related; SPTR:  uncharacterized protein
YP_004776169.1	PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: chu:CHU_2541 protease; PFAM: Abortive infection protein; SPTR: Protease
YP_004776170.1	KEGG: dfe:Dfer_0778 hypothetical protein; SPTR:  uncharacterized protein
YP_004776176.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: mca:MCA1893 type I restriction-modification system, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Type I site-specific deoxyribonuclease, HsdR family
YP_004776177.1	PFAM: PhoD-like phosphatase; KEGG: pcu:pc1536 hypothetical protein; SPTR:  uncharacterized protein
YP_004776178.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: cpi:Cpin_7299 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Periplasmic sensor signal transduction histidine kinase
YP_004776179.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: phe:Phep_0588 response regulator receiver; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator
YP_004776181.1	PFAM: Cytochrome c; TIGRFAM:  membrane-bound dehydrogenase domain; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428; KEGG: dfe:Dfer_4984 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase
YP_004776182.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: zpr:ZPR_4168 sodium:sulfate symporter; PFAM: Sodium/sulphate symporter; SPTR: Anion transporter; TIGRFAM: Sodium/sulphate symporter
YP_004776183.1	InterPro IPR001440; KEGG: mtt:Ftrac_0498 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR:  uncharacterized protein
YP_004776184.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR006691:IPR005743; KEGG: mtt:Ftrac_0499 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, subunit A
YP_004776185.1	KEGG: mtt:Ftrac_0500 hypothetical protein; SPTR:  uncharacterized protein
YP_004776186.1	KEGG: zpr:ZPR_1634 hypothetical protein; SPTR:  uncharacterized protein
YP_004776187.1	PFAM: Ribulose-phosphate 3 epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: mtt:Ftrac_0486 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase
YP_004776188.1	PFAM: Subtilase; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sli:Slin_1650 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Exported serine protease, subtilase
YP_004776189.1	KEGG: sli:Slin_1651 hypothetical protein; SPTR:  uncharacterized protein
YP_004776190.1	COGs: COG0135 Phosphoribosylanthranilate isomerase; KEGG: mtt:Ftrac_0467 hypothetical protein; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase
YP_004776191.1	PFAM:  methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; InterPro IPR003358; KEGG: lby:Lbys_0927 tRNA (guanine-n(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase
YP_004776192.1	PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: psn:Pedsa_1924 FolC bifunctional protein; PFAM: Mur ligase, central; SPTR: Tetrahydrofolate synthase; TIGRFAM: Folylpolyglutamate synthetase
YP_004776193.1	KEGG: mtt:Ftrac_0329 hypothetical protein; SPTR:  TonB exported protein
YP_004776194.1	PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: mtt:Ftrac_0328 outer membrane transport energization protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: ExbD/TolR family protein
YP_004776195.1	PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: mtt:Ftrac_0327 outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family protein
YP_004776196.1	PFAM: Sporulation related domain; InterPro IPR007730; KEGG: mtt:Ftrac_0326 sporulation domain-containing protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Sporulation domain-containing protein
YP_004776198.1	KEGG: dfe:Dfer_1051 hypothetical protein; SPTR:  uncharacterized protein
YP_004776199.1	PFAM: Tetratricopeptide repeat; TIGRFAM: FimV C-terminal domain; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_0324 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR:  ATP synthase F1, delta subunit
YP_004776200.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372:IPR005790; KEGG: chu:CHU_1537 hypothetical protein; PFAM: DNA polymerase III, delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_004776201.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: mtt:Ftrac_0204 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein
YP_004776202.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_0145 UspA domain-containing protein; PFAM: UspA; SPTR:  universal stress protein
YP_004776203.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140; KEGG: gfo:GFO_0312 D-isomer-specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase
YP_004776204.1	PFAM: Protein of unknown function (DUF2911); KEGG: zpr:ZPR_2316 hypothetical protein; SPTR:  uncharacterized protein
YP_004776205.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734:IPR019900; KEGG: mtt:Ftrac_0141 sss sodium solute transporter superfamily; PFAM: Sodium/solute symporter; SPTR: Transporter, solute:sodium symporter (SSS) family; TIGRFAM: Sodium/solute symporter, subgroup
YP_004776206.1	PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: mtt:Ftrac_0206 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Lipoprotein
YP_004776207.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); KEGG: sli:Slin_1668 phytanoyl-CoA dioxygenase; SPTR: Phytanoyl-CoA dioxygenase
YP_004776208.1	PFAM: Domain of unknown function (DUF1083); KEGG: sli:Slin_2536 hypothetical protein; SPTR:  uncharacterized protein
YP_004776209.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_04045 hypothetical protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR:  uncharacterized protein
YP_004776210.1	KEGG: mtt:Ftrac_0878 hypothetical protein; SPTR:  uncharacterized protein
YP_004776211.1	PFAM: FAD dependent oxidoreductase; COGs: COG0579 dehydrogenase; InterPro IPR006076; KEGG: lby:Lbys_3394 fad dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD-dependent oxidoreductase
YP_004776212.1	PFAM: Hpt domain; SPTR:  uncharacterized protein
YP_004776213.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: mtt:Ftrac_1079 hi0933 family protein; PFAM: HI0933-like protein; SPTR: Pyridine nucleotide-disulfide oxidoreductase; TIGRFAM: HI0933-like protein
YP_004776214.1	PFAM: Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR008571; KEGG: chu:CHU_1283 hypothetical protein; PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, SPTR:  uncharacterized protein
YP_004776215.1	KEGG: xau:Xaut_3311 molybdenum cofactor biosynthesis protein; SPTR:  uncharacterized protein
YP_004776216.1	KEGG: chu:CHU_2630 hypothetical protein; SPTR:  uncharacterized protein
YP_004776219.1	KEGG: mtt:Ftrac_0682 DnaJ-like chaperone; heat shock protein; SPTR:  uncharacterized protein
YP_004776220.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440:IPR013105; KEGG: mtt:Ftrac_0686 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004776221.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451; KEGG: mtt:Ftrac_0688 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; SPTR: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_004776222.1	PFAM: Glycosyl transferases group 1; KEGG: mtt:Ftrac_0689 glycosyl transferase group 1; SPTR: Lps biosynthesis rfbu related protein
YP_004776223.1	PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367:IPR007167; KEGG: mtt:Ftrac_0690 iron (metal) dependent repressor, dtxr family; PFAM: Iron dependent repressor; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor; SPTR: Iron repressor protein
YP_004776224.1	PFAM: Protein of unknown function, DUF255; COGs: COG2143 Thioredoxin-related protein; InterPro IPR004879; KEGG: mtt:Ftrac_0696 thioredoxin-related protein-like protein; SPTR: Secreted protein containing DUF255
YP_004776225.1	PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: mtt:Ftrac_1499 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase trmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein
YP_004776226.1	TIGRFAM: DNA binding domain, excisionase; InterPro IPR010093; KEGG: cly:Celly_3207 DNA-binding domain-containing protein, excisionase; SPTR: DNA binding domain protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding
YP_004776227.1	PFAM: Phage integrase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cly:Celly_3208 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Integrase
YP_004776229.1	TIGRFAM: DNA binding domain, excisionase; InterPro IPR010093; KEGG: cly:Celly_3210 DNA-binding domain-containing protein, excisionase; SPTR: DNA binding domain protein, excisionase; TIGRFAM: Excisionase/Xis, DNA-binding
YP_004776230.1	KEGG: cly:Celly_3211 hypothetical protein; SPTR:  uncharacterized protein
YP_004776231.1	PFAM: VirE N-terminal domain; InterPro IPR014907; KEGG: cly:Celly_3212 VirE protein; PFAM: VirE N-terminal; SPTR: VirE protein
YP_004776232.1	PFAM: Primase C terminal 2 (PriCT-2); InterPro IPR014819; KEGG: cly:Celly_3213 hypothetical protein; PFAM: Primase, C-terminal 2; SPTR:  uncharacterized protein
YP_004776233.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fps:FP0857  DNA binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR:  uncharacterized protein; manually curated
YP_004776234.1	PFAM: Piwi domain; InterPro IPR003165; KEGG: cly:Celly_3216 stem cell self-renewal protein Piwi; PFAM: Stem cell self-renewal protein Piwi; SPTR: Stem cell self-renewal protein Piwi
YP_004776235.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: cat:CA2559_11678  transcription regulator; SPTR:  uncharacterized protein
YP_004776236.1	manually curated
YP_004776237.1	PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: mtt:Ftrac_1216 heavy metal efflux pump, czca family; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA
YP_004776238.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_1187 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD
YP_004776239.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_2056 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein; manually curated
YP_004776240.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_1213 cation diffusion facilitator family transporter; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein
YP_004776241.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2060 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR:  regulatory protein
YP_004776242.1	PFAM: Heavy-metal-associated domain; KEGG: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein
YP_004776243.1	KEGG: mtt:Ftrac_2114 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004776244.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG3696  silver efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_2113 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein
YP_004776245.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_2112 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004776246.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: mtt:Ftrac_3540 copper-translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004776247.1	PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004776248.1	PFAM: Protein of unknown function (DUF3347); KEGG: rbi:RB2501_04700 hypothetical protein; SPTR:  uncharacterized protein
YP_004776249.1	KEGG: rbi:RB2501_04695 hypothetical protein; SPTR:  uncharacterized protein
YP_004776250.1	PFAM: Cation efflux family; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: ran:Riean_1807 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein
YP_004776251.1	PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: mtt:Ftrac_2122 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR
YP_004776252.1	PFAM: Heavy-metal-associated domain; MerT mercuric transport protein; COGs: COG2608 Copper chaperone; InterPro IPR003457:IPR006121; KEGG: Heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: MerT-like protein containing heavy metal transport/detoxification domain
YP_004776253.1	KEGG: mtt:Ftrac_2119 hypothetical protein; SPTR:  uncharacterized protein
YP_004776254.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776255.1	KEGG: cat:CA2559_00400 hypothetical protein; SPTR:  uncharacterized protein
YP_004776256.1	PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: hoh:Hoch_3526 OsmC family protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein
YP_004776257.1	PFAM: Plasmid maintenance system killer protein; COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: hap:HAPS_0388 plasmid maintenance system killer/proteic killer protein, RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Plasmid maintenance system killer; SPTR: Plasmid maintenance system killer; manually curated
YP_004776258.1	PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR013430:IPR001387; KEGG: net:Neut_2616 XRE family plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; SPTR: Plasmid maintenance system antidote protein, XRE family; TIGRFAM: Addiction module antidote protein, HigA
YP_004776259.1	PFAM: Uncharacterised protein family (UPF0156); TIGRFAM:  addiction module antidote protein, CC2985 family; KEGG: cat:CA2559_06880 hypothetical protein; SPTR:  uncharacterized protein
YP_004776260.1	PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: mtt:Ftrac_3443 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system
YP_004776261.1	PFAM: Phd_YefM; KEGG: pph:Ppha_1444 hypothetical protein; SPTR:  uncharacterized protein
YP_004776262.1	PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: cgt:cgR_1608 hypothetical protein; PFAM: BNR repeat; SPTR:  uncharacterized protein
YP_004776263.1	KEGG: rba:RB9146 hypothetical protein; SPTR:  uncharacterized protein
YP_004776264.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR006124; KEGG: fbc:FB2170_02115 hypothetical protein; PFAM: Metalloenzyme; SPTR: Phosphodiesterase/nucleotide pyrophosphatase
YP_004776265.1	KEGG: phe:Phep_2377 hypothetical protein; SPTR:  uncharacterized protein
YP_004776266.1	KEGG: lby:Lbys_1886 periplasmic protein; SPTR:  periplasmic protein
YP_004776268.1	KEGG: bfs:BF3025 hypothetical protein; SPTR:  uncharacterized protein
YP_004776269.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: bfr:BF3184 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004776270.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_2028  anti-sigma factor; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004776271.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: bvu:BVU_0109 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004776272.1	PFAM: Protein of unknown function (DUF2938); KEGG: fjo:Fjoh_2644 hypothetical protein; SPTR:  uncharacterized protein
YP_004776274.1	PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: cts:Ctha_0665 phosphoesterase PA-phosphatase-like protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Phosphoesterase PA-phosphatase related
YP_004776275.1	COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: pmx:PERMA_0510  dolichyl-phosphate-mannose-protein mannosyltransferase; PFAM: Glycosyl transferase, family 39; SPTR:  dolichyl-phosphate-mannose-protein mannosyltransferase
YP_004776276.1	PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013105:IPR001440; KEGG: pmf:P9303_28721 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR:  uncharacterized protein
YP_004776277.1	PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: gfo:GFO_1579 cold shock-like protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock-like protein
YP_004776278.1	PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: dfe:Dfer_4688 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein
YP_004776279.1	COGs: COG3607 lactoylglutathione lyase; InterPro IPR004360; KEGG: pjd:Pjdr2_0655 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR:  uncharacterized protein
YP_004776280.1	KEGG: zpr:ZPR_1398 hypothetical protein; SPTR:  DNA-binding protein
YP_004776281.1	PFAM: Glycosyl transferase 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mtt:Ftrac_3744 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family
YP_004776282.1	PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mtt:Ftrac_3356 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Membrane protein
YP_004776283.1	PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: pdi:BDI_3709 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR:  uncharacterized protein
YP_004776284.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: dfe:Dfer_4814 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase
YP_004776285.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: dfe:Dfer_2934 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004776286.1	SPTR:  uncharacterized protein
YP_004776287.1	KEGG: cat:CA2559_10293 hypothetical protein; SPTR:  uncharacterized protein
YP_004776288.1	PFAM: Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753:IPR020579; KEGG: mtt:Ftrac_3218 exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; SPTR: Exodeoxyribonuclease VII, large subunit; TIGRFAM: Exonuclease VII, large subunit
YP_004776289.1	PFAM: Exonuclease VII small subunit; InterPro IPR003761; KEGG:  exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII, small subunit; SPTR: Exodeoxyribonuclease VII, small subunit
YP_004776290.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: DNA ligase; InterProIPR013840:IPR001357:IPR001679:IPR013839:IPR 004150:IPR004149; KEGG: zpr:ZPR_3580 DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; SMART: NAD-dependent DNA ligase, N-terminal; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase
YP_004776292.1	PFAM: Dihydrodipicolinate synthetase; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR005263:IPR002220; KEGG: mtt:Ftrac_0816 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily
YP_004776293.1	PFAM: Histone H1-like protein Hc1; KEGG: chu:CHU_1311 hypothetical protein; SPTR:  uncharacterized protein
YP_004776294.1	PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: mtt:Ftrac_1580 glycine C-acetyltransferase; PFAM: Aminotransferase, class I/II; SPTR: 2-amino-3-ketobutyrate CoA ligase
YP_004776296.1	PFAM: Maf-like protein; TIGRFAM: MAF protein; COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: osp:Odosp_0698 septum formation protein Maf; PFAM: Maf-like protein; SPTR: Maf-like protein HMPREF0648_0781; TIGRFAM: Maf-like protein; manually curated
YP_004776297.1	KEGG: sli:Slin_6323 lipoprotein; SPTR:  uncharacterized protein
YP_004776298.1	PFAM: LamB/YcsF family; COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: fbc:FB2170_12361 hypothetical protein; PFAM: LamB/YcsF; SPTR:  uncharacterized protein
YP_004776299.1	PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833; KEGG: cao:Celal_3657 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR:  uncharacterized protein
YP_004776300.1	PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: zpr:ZPR_2806 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR:  urea carboxylase
YP_004776301.1	PFAM: Protein of unknown function (DUF3307); KEGG: fjo:Fjoh_2211 hypothetical protein; SPTR:  uncharacterized protein
YP_004776302.1	KEGG: shg:Sph21_3661 regulatory protein MarR; SPTR:  uncharacterized protein
YP_004776303.1	PFAM: L-lactate permease; TIGRFAM: L-lactate transport; COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: rca:Rcas_1588 L-lactate transport; PFAM: L-lactate permease; SPTR: L-lactate transport; TIGRFAM: L-lactate permease
YP_004776304.1	PFAM: Malate synthase; TIGRFAM: malate synthase A; COGs: COG2225 Malate synthase; InterPro IPR011076; KEGG: dpr:Despr_1204 malate synthase; PFAM: Malate synthase-like, core; SPTR: Malate synthase
YP_004776305.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: sli:Slin_1104 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Isoquinoline 1-oxidoreductase, beta subunit
YP_004776306.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: dfe:Dfer_3446 (2Fe-2S)-binding domain protein; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR: (2Fe-2S)-binding domain protein
YP_004776307.1	KEGG: shg:Sph21_1866 hypothetical protein; SPTR:  uncharacterized protein
YP_004776308.1	PFAM: Protein of unknown function (DUF3380); KEGG: paa:Paes_1872 peptidoglycan-binding domain 1 protein; SPTR: Peptidoglycan-binding domain 1 protein
YP_004776309.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776311.1	PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172; KEGG: npu:Npun_F2280 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; SPTR: Glucose-methanol-choline oxidoreductase
YP_004776312.1	PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: scl:sce2632 calcineurin-like phosphoesterase; PFAM: Metallophosphoesterase; SPTR:  uncharacterized protein
YP_004776313.1	PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: npu:Npun_F2284 patatin; PFAM: Patatin; SPTR: Patatin
YP_004776314.1	KEGG: sur:STAUR_6635 patatin domain-containing protein; SPTR: Patatin domain protein
YP_004776315.1	KEGG: lch:Lcho_1869 hypothetical protein; SPTR:  uncharacterized protein
YP_004776316.1	PFAM: Acetoacetate decarboxylase (ADC); KEGG: npu:Npun_F2282 hypothetical protein; SPTR:  uncharacterized protein
YP_004776317.1	KEGG: npu:Npun_F2281 hypothetical protein; SPTR:  uncharacterized protein
YP_004776318.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'; COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014001:IPR001650:IPR005259:IPR011545; KEGG: dfe:Dfer_3377 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Primosomal protein N`; TIGRFAM: Primosomal protein n
YP_004776319.1	PFAM: Protein of unknown function, DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: dfe:Dfer_0027 protein of unknown function DUF255; SPTR: dTMP kinase
YP_004776320.1	PFAM: GSCFA family; InterPro IPR014982; KEGG: lby:Lbys_3542 gscfa domain protein; PFAM: GSCFA; SPTR: Lipoprotein
YP_004776321.1	SPTR:  uncharacterized protein
YP_004776322.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020594:IPR020070:IPR020069; KEGG: lby:Lbys_3018 lsu ribosomal protein l9p; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast
YP_004776323.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; COGs: COG0238 Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; InterPro IPR001648; KEGG: lby:Lbys_3019 ssu ribosomal protein s18p; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18
YP_004776324.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; InterPro IPR020814:IPR000529; KEGG: mtt:Ftrac_0280 SSU ribosomal protein s6p; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6
YP_004776325.1	KEGG: mtt:Ftrac_0285 hypothetical protein; SPTR:  uncharacterized protein
YP_004776326.1	PFAM: Ribosomal RNA adenine dimethylase; KEGG: dfe:Dfer_0196 O-methyltransferase-like protein; SPTR:  uncharacterized protein
YP_004776327.1	PFAM: Protein of unknown function (DUF525); COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; InterPro IPR007474; KEGG: mtt:Ftrac_0288 ApaG domain protein; PFAM: ApaG; SPTR: Phosphoserine phosphatase
YP_004776328.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; COGs: COG0692 Uracil DNA glycosylase; HAMAP: Uracil-DNA glycosylase; InterPro IPR002043:IPR005122; KEGG: bvu:BVU_4148 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase; TIGRFAM: Uracil-DNA glycosylase
YP_004776329.1	PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; InterPro IPR000223:IPR019759; KEGG: dfe:Dfer_0210 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I
YP_004776330.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR011770:IPR000846; KEGG: dfe:Dfer_0209 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant
YP_004776331.1	KEGG: bvu:BVU_1913 hypothetical protein; SPTR:  uncharacterized protein
YP_004776332.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: mtt:Ftrac_3754 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: SpoOJ protein; TIGRFAM: ParB-like partition protein
YP_004776333.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: mtt:Ftrac_3755 chromosome segregation atpase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Sporulation initiation inhibitor protein Soj
YP_004776334.1	PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; HAMAP: UPF0173 metal-dependent hydrolase; KEGG: fjo:Fjoh_2786 beta-lactamase domain-containing protein; SPTR: UPF0173 metal-dependent hydrolase M23134_04293
YP_004776335.1	PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane protein oxaA; InterPro IPR019998:IPR020001:IPR001708; KEGG: mtt:Ftrac_0306 membrane protein insertase, YidC/oxa1 family; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; Membrane insertion protein, OxoA/YidC, N-terminal
YP_004776336.1	PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: chu:CHU_2536 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; SPTR: CTP synthase; TIGRFAM: CTP synthase
YP_004776337.1	PFAM: Fumarylacetoacetate (FAA) hydrolase; COGs: COG3970 Fumarylacetoacetate (FAA) hydrolase; InterPro IPR002529; KEGG: sli:Slin_1198 fumarylacetoacetate hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: Fumarylacetoacetate (FAA) hydrolase
YP_004776339.1	PFAM: Di-glucose binding within endoplasmic reticulum; InterPro IPR006626:IPR003305; KEGG: parallel beta-helix repeat-containing protein; PFAM: Carbohydrate-binding, CenC-like; SPTR:  uncharacterized protein; TIGRFAM: parallel beta-helix repeat containing protein
YP_004776340.1	KEGG: mxa:MXAN_1696 Ig-like domain-containing protein; SPTR: Bacterial Ig-like domain protein
YP_004776341.1	PFAM: Bacterial Ig-like domain (group 1); InterPro IPR003344; KEGG: sur:STAUR_2903 bacterial ig-like domain-containing protein; PFAM: Bacterial Ig-like, group 1; SMART: Bacterial Ig-like, group 1; SPTR: Bacterial Ig-like domain protein
YP_004776342.1	PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: eat:EAT1b_1222 gluconate transporter; PFAM: Gluconate transporter; SPTR: Gluconate transporter; TIGRFAM: Gluconate transporter
YP_004776343.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: sli:Slin_3955 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG/KHG aldolase; SPTR: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: KDPG/KHG aldolase
YP_004776344.1	PFAM: 2-keto-3-deoxy-galactonokinase; COGs: COG3734 2-keto-3-deoxy-galactonokinase; InterPro IPR007729; KEGG: sli:Slin_3954 2-keto-3-deoxy-galactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; SPTR: 2-keto-3-deoxy-galactonokinase
YP_004776345.1	PFAM: Domain of Unknown Function (DUF748); KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776346.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1584 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004776347.1	PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_0688 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004776350.1	PFAM: Phosphoesterase; Domain of unknown function (DUF756); TIGRFAM: phospholipase C, phosphocholine-specific, Pseudomonas-type; COGs: COG3511 Phospholipase C; InterPro IPR006311:IPR017767:IPR007312:IPR008475; KEGG: shg:Sph21_0662 phospholipase C, phosphocholine-specific; PFAM: Phosphoesterase; Protein of unknown function DUF756; SPTR: Phospholipase C, phosphocholine-specific; TIGRFAM: Phospholipase C, phosphocholine-specific; Twin-arginine translocation pathway, signal sequence
YP_004776351.1	PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: shg:Sph21_0663 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase
YP_004776352.1	PFAM: Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR011697; KEGG: peptidase C26; PFAM: Peptidase C26; SPTR: Glutamine amidotransferase, class II
YP_004776353.1	PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: shg:Sph21_0665 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; SPTR: 3-dehydroquinate synthase
YP_004776354.1	PFAM: Glutamine synthetase, catalytic domain; COGs: COG0174 Glutamine synthetase; InterPro IPR008146; KEGG: shg:Sph21_0666 glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic region; SPTR: L-glutamine synthetase
YP_004776355.1	PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004757:IPR004841; KEGG: ppn:Palpr_0156 ethanolamine transporter; PFAM: Amino acid permease-associated region; SPTR: Ethanolamine transporter; TIGRFAM: Ethanolamine permease
YP_004776356.1	PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: mtt:Ftrac_2782 deoxynucleoside kinase; PFAM: Deoxynucleoside kinase; SPTR: Deoxynucleoside kinase
YP_004776357.1	KEGG: mtt:Ftrac_3782 hypothetical protein; SPTR:  uncharacterized protein
YP_004776359.1	SPTR: Two-component system sensor protein
YP_004776360.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: ppn:Palpr_1600 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; SPTR: Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; manually curated
YP_004776361.1	KEGG: hypothetical protein
YP_004776362.1	PFAM: Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: cao:Celal_0130 peptidase S41; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR: Peptidase S41
YP_004776363.1	KEGG: cao:Celal_0129 hypothetical protein; SPTR:  uncharacterized protein
YP_004776364.1	KEGG: phe:Phep_0353 signal peptide; SPTR: Signal peptide
YP_004776365.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2218 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004776366.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2262 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004776367.1	KEGG: mtt:Ftrac_0372 short-chain dehydrogenase; SPTR: Short-chain dehydrogenase
YP_004776368.1	KEGG: cpi:Cpin_6080 hypothetical protein; SPTR:  uncharacterized protein
YP_004776369.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_0630 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase
YP_004776370.1	KEGG: vvm:VVM_02720 hypothetical protein; SPTR:  uncharacterized protein
YP_004776371.1	PFAM: TrkA-N domain
YP_004776372.1	KEGG: sli:Slin_3952 hypothetical protein; SPTR:  uncharacterized protein
YP_004776373.1	KEGG: shg:Sph21_1564 hypothetical protein; SPTR:  uncharacterized protein
YP_004776374.1	PFAM: Protein of unknown function (DUF2652); KEGG: fbc:FB2170_04430 hypothetical protein; SPTR:  uncharacterized protein
YP_004776375.1	KEGG: sus:Acid_6155 hypothetical protein; SPTR:  uncharacterized protein
YP_004776376.1	PFAM: Domain of unknown function (DUF1083); KEGG: dat:HRM2_08770 GGDEF domain protein (selenocysteine protein); SPTR: GGDEF domain protein (Selenocysteine protein)
YP_004776377.1	PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: rca:Rcas_2627 MlrC domain-containing protein; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR:  uncharacterized protein
YP_004776378.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: fbc:FB2170_04530  transporter; PFAM: Bile acid:sodium symporter; SPTR:  transporter
YP_004776379.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2141); InterPro IPR018673; KEGG: sli:Slin_1194 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR:  uncharacterized protein
YP_004776380.1	KEGG: fbc:FB2170_15283  outer membrane protein; SPTR:  outer membrane protein
YP_004776381.1	KEGG: fjo:Fjoh_1685 hypothetical protein; SPTR: Hypothetical lipoprotein
YP_004776382.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: ppn:Palpr_2694 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Histidine kinase
YP_004776383.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: psn:Pedsa_2901 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family
YP_004776385.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fjo:Fjoh_4286 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004776386.1	PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fjo:Fjoh_4285 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein
YP_004776387.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fjo:Fjoh_4284 outer membrane protein-like protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein-like protein
YP_004776388.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: fjo:Fjoh_4283 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS
YP_004776389.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fjo:Fjoh_4282 LytTR family two component transcriptional regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family
YP_004776390.1	KEGG: rmr:Rmar_2745 HTTM domain-containing protein; SPTR: HTTM domain protein
YP_004776392.1	PFAM: Thi4 family; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR003953; KEGG: phe:Phep_2084 FAD dependent oxidoreductase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: Monooxygenase FAD-binding
YP_004776393.1	KEGG: rmr:Rmar_2745 HTTM domain-containing protein; SPTR: HTTM domain protein
YP_004776395.1	PFAM: Thi4 family; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: phe:Phep_2084 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Monooxygenase FAD-binding
YP_004776397.1	SPTR:  uncharacterized protein
YP_004776398.1	SPTR:  uncharacterized protein
YP_004776399.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: shg:Sph21_0134 aldehyde dehydrogenase (pyrroloquinoline-quinone); PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Isoquinoline 1-oxidoreductase, beta subunit
YP_004776400.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: Isoquinoline 1-oxidoreductase; PFAM: [2Fe-2S]-binding; Ferredoxin; SPTR:  isoquinoline 1-oxidoreductase, alpha subunit
YP_004776401.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: rbi:RB2501_01021 isoquinoline 1-oxidoreductase subunit beta; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Isoquinoline 1-oxidoreductase, beta subunit
YP_004776402.1	PFAM: Flavodoxin; KEGG: flavodoxin; SPTR: Flavodoxin
YP_004776403.1	KEGG: rbi:RB2501_01046 hypothetical protein; SPTR:  uncharacterized protein
YP_004776405.1	PFAM: Histidine kinase; COGs: COG3275  regulator of cell autolysis; InterPro IPR010559; KEGG: dfe:Dfer_0763 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS
YP_004776406.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: dfe:Dfer_0764 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, LytTR family
YP_004776407.1	PFAM: Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001867; KEGG: phe:Phep_0940 transcriptional regulator domain-containing protein; PFAM: Signal transduction response regulator, C-terminal; SPTR: DNA-binding response regulator RprY
YP_004776408.1	PFAM: Two component regulator propeller; COGs: COG3292 periplasmic ligand-binding sensor domain; InterPro IPR011110; KEGG: cpi:Cpin_3143 two component regulator propeller domain protein; PFAM: Two component regulator propeller; SPTR: Two component regulator propeller domain protein
YP_004776409.1	PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: gfo:GFO_0929 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR:  uncharacterized protein
YP_004776411.1	PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: dfe:Dfer_2378 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR:  uncharacterized protein
YP_004776412.1	PFAM: TonB dependent receptor; InterPro IPR000531; KEGG: dfe:Dfer_2379 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004776413.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pdi:BDI_3256  transposase; PFAM: Transposase, IS4-like; SPTR: ISPg3, transposase
YP_004776415.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; COGs: COG0550 Topoisomerase IA; InterProIPR006154:IPR003601:IPR003602:IPR005738:IPR 006171:IPR013497; KEGG: cao:Celal_3261 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SPTR: DNA topoisomerase III; TIGRFAM: DNA topoisomerase III, bacterial-type
YP_004776416.1	PFAM: HicB family; COGs: COG4226 Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters; InterPro IPR008651; KEGG: fjo:Fjoh_0431 HicB family protein; SPTR: HicB protein
YP_004776417.1	KEGG: amr:AM1_B0340 hypothetical protein; SPTR: HicA protein
YP_004776418.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; KEGG: bfs:pBF9343.15  ParA-related protein; SPTR:  uncharacterized protein
YP_004776419.1	PFAM: Relaxase/Mobilisation nuclease domain; InterPro IPR005094; KEGG: bsa:Bacsa_3688 relaxase/mobilization nuclease; PFAM: Endonuclease relaxase, MobA/VirD2; SPTR:  uncharacterized protein
YP_004776420.1	PFAM: Bacterial mobilisation protein (MobC); SPTR: Mobilization protein
YP_004776421.1	PFAM: Matrixin; InterPro IPR006026:IPR001818; KEGG: bfo:BRAFLDRAFT_264495 hypothetical protein; PFAM: Peptidase M10A/M12B, matrixin/adamalysin; SMART: Peptidase, metallopeptidases; SPTR: Karilysin protease
YP_004776423.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR004763:IPR001036; KEGG: mtt:Ftrac_1716 heavy metal efflux pump, czca family; PFAM: Acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA
YP_004776424.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143:IPR000089; KEGG: rbi:RB2501_01101 secretion protein HlyD; PFAM: Biotin/lipoyl attachment; Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD
YP_004776425.1	KEGG: mtt:Ftrac_1719 hypothetical protein; SPTR:  uncharacterized protein
YP_004776426.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: rbi:RB2501_01111  puter membrane protein; SPTR:  puter membrane protein
YP_004776427.1	KEGG: rbi:RB2501_01116 hypothetical protein; SPTR:  uncharacterized protein
YP_004776428.1	PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; COGs: COG3004 Na+/H+ antiporter; HAMAP: Na+/H+ antiporter NhaA; InterPro IPR004670; KEGG: gfo:GFO_1203 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_004776429.1	PFAM: Protein of unknown function (DUF3478); KEGG: gfo:GFO_1210 hypothetical protein; SPTR:  uncharacterized protein
YP_004776430.1	PFAM: Amino acid permease; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841; KEGG: gfo:GFO_1208 amino acid permease; PFAM: Amino acid permease-associated region; SPTR: Amino acid permease
YP_004776431.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: mtt:Ftrac_2056 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein
YP_004776432.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: gfo:GFO_1201 Fur family transcriptional regulator protein; PFAM: Ferric-uptake regulator; SPTR: Fur family transcriptional regulator protein
YP_004776433.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006404:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: gfo:GFO_1200 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Cadmium translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004776434.1	PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; COGs: COG3004 Na+/H+ antiporter; HAMAP: Na+/H+ antiporter NhaA; InterPro IPR004670; KEGG: gfo:GFO_1203 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA 1; TIGRFAM: Na+/H+ antiporter NhaA
YP_004776435.1	PFAM: Protein of unknown function (DUF3478); KEGG: zpr:ZPR_4069 hypothetical protein; SPTR:  uncharacterized protein
YP_004776436.1	PFAM: MgtC family; COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: gfo:GFO_1199 MgtC/SapB family transporter; PFAM: MgtC/SapB transporter; SPTR: Membrane protein, MgtC
YP_004776437.1	PFAM: Bestrophin; COGs: COG3781 membrane protein; InterPro IPR007913; KEGG: gfo:GFO_1198 hypothetical protein; SPTR:  uncharacterized protein
YP_004776438.1	PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: mtt:Ftrac_1212 hypothetical protein; PFAM: Ferric-uptake regulator; SPTR:  uncharacterized protein
YP_004776439.1	KEGG: zpr:ZPR_4072 hypothetical protein; SPTR:  uncharacterized protein
YP_004776440.1	PFAM: Divergent AAA domain; InterPro IPR007421; KEGG: gfo:GFO_1196 divergent AAA domain-containing protein; PFAM: ATPase associated with various cellular activities, AAA-4; SPTR: Membrane protein containing divergent AAA domain
YP_004776441.1	PFAM: Predicted membrane protein (DUF2078); InterPro IPR018649; KEGG: zpr:ZPR_4077 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR:  uncharacterized protein
YP_004776442.1	PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: zpr:ZPR_4080 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II
YP_004776443.1	PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: gfo:GFO_2796 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR:  uncharacterized protein
YP_004776444.1	TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_1187 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR:  lipoprotein; TIGRFAM: Secretion protein HlyD
YP_004776445.1	PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: gfo:GFO_1186 AcrB/AcrD/AcrF family heavy metal cation efflux protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: AcrB/AcrD/AcrF family heavy metal cation efflux protein containing OEP domains; TIGRFAM: Heavy metal efflux pump CzcA
YP_004776447.1	KEGG: mtt:Ftrac_1217 hypothetical protein; SPTR:  uncharacterized protein
YP_004776449.1	KEGG: gfo:GFO_1320 hypothetical protein; SPTR:  uncharacterized protein
YP_004776450.1	PFAM: Bacterial regulatory protein, arsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: mtt:Ftrac_1223 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family transcriptional regulator
YP_004776451.1	PFAM: Heavy-metal-associated domain; MerT mercuric transport protein; TIGRFAM: copper ion binding protein; COGs: COG2608 Copper chaperone; InterPro IPR003457:IPR006121; KEGG: mtt:Ftrac_1224 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: Probable mercuric transport protein
YP_004776452.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: mtt:Ftrac_1225 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004776453.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR011796:IPR006121:IPR013027:IPR004099; KEGG: zpr:ZPR_4025 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SPTR: Possible mercury(II) reductase; TIGRFAM: Mercuric reductase MerA
YP_004776455.1	PFAM: Heavy-metal-associated domain; KEGG: mtt:Ftrac_2058 protein containing heavy-metal-associated domain; SPTR: Protein containing heavy-metal-associated domain
YP_004776456.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR006121:IPR 008250:IPR005834; KEGG: mtt:Ftrac_2059 heavy metal translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004776457.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2060 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776458.1	PFAM: DeoC/LacD family aldolase; COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: mtt:Ftrac_2063 fructose-bisphosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase
YP_004776459.1	PFAM: Major Facilitator Superfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: mtt:Ftrac_2064 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1
YP_004776460.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006403:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: mtt:Ftrac_2065 copper-translocating p-type atpase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter
YP_004776461.1	PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660; KEGG: mtt:Ftrac_2066 hypothetical protein; PFAM: Polyphosphate kinase 2; SPTR:  uncharacterized protein; TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family
YP_004776462.1	PFAM: Rhodanese-like domain; InterPro IPR001763; KEGG: mtt:Ftrac_2100 rhodanese domain protein; SMART: Rhodanese-like; SPTR: Rhodanese domain protein
YP_004776463.1	PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: mtt:Ftrac_2068 amino acid/polyamine/organocation transporter, apc superfamily; PFAM: Amino acid permease-associated region; SPTR: Amino acid/polyamine/organocation transporter, APC superfamily
YP_004776464.1	KEGG: mtt:Ftrac_2069 hypothetical protein; SPTR:  uncharacterized protein
YP_004776465.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946:IPR000836; KEGG: mtt:Ftrac_2070 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase
YP_004776466.1	PFAM: Glycosyl transferase, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase, helical bundle domain; TIGRFAM:  thymidine phosphorylase; COGs: COG0213 Thymidine phosphorylase; HAMAP: Thymidine phosphorylase related; InterPro IPR013466:IPR013102; KEGG: mtt:Ftrac_2071 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase, C-terminal; SPTR: Thymidine phosphorylase; TIGRFAM: Thymidine phosphorylase related
YP_004776467.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: mtt:Ftrac_2072 RNA-metabolising metallo-beta-lactamase; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: RNA-metabolising metallo-beta-lactamase
YP_004776468.1	PFAM: ATP cone domain; Restriction endonuclease; InterPro IPR007560; KEGG: mtt:Ftrac_2073 ATP-cone domain protein; PFAM: Restriction endonuclease, type IV-like, Mrr; SPTR: ATP-cone domain protein
YP_004776469.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_7106 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Possible tonB-linked outer membrane receptor
YP_004776471.1	PFAM: domain; Domain of unknown function; 4Fe-4S binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase
YP_004776472.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR001450; KEGG: mca:MCA0770  glutamate synthase (NADPH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004776473.1	PFAM: CBS domain; Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR000644:IPR008915; KEGG: peptidase M50; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SPTR: Peptidase M50
YP_004776474.1	KEGG: chd:Calhy_0247 spermine synthase; SPTR: Spermine synthase
YP_004776475.1	PFAM: Phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023; KEGG: zpr:ZPR_3404 6-phosphofructokinase; PFAM: Phosphofructokinase; SPTR: 6-phosphofructokinase 2
YP_004776476.1	PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; COGs: COG0058 Glucan phosphorylase; InterPro IPR011834:IPR000811; KEGG: geb:GM18_3980 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR:  uncharacterized protein; TIGRFAM: Alpha-glucan phosphorylase
YP_004776477.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: zpr:ZPR_3403 carboxylesterase (est-1); PFAM: Alpha/beta hydrolase fold-1; SPTR: Carboxylesterase (Est-1)
YP_004776478.1	PFAM: Protein of unknown function (DUF3347); KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; SPTR: Secretion protein HlyD
YP_004776479.1	PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: chu:CHU_0959 A-glucosidase; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: A-glycosidase, glycoside hydrolase 13 protein
YP_004776480.1	PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: rbi:RB2501_04810 proton/sodium-glutamate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Proton/sodium-glutamate symporter
YP_004776481.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; HAMAP: Glyceraldehyde-3-phosphate dehydrogenase; InterPro IPR006436:IPR020828:IPR020829; KEGG: zpr:ZPR_3400 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II
YP_004776482.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; HAMAP: Glyceraldehyde-3-phosphate dehydrogenase; InterPro IPR006436:IPR020828; KEGG: mtt:Ftrac_2076 glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type II; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II
YP_004776483.1	PFAM: Ion channel; InterPro IPR013099; KEGG: mtt:Ftrac_2077 ion transport 2 domain protein; PFAM: Ion transport 2; SPTR: Ion transport 2 domain protein
YP_004776484.1	PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; COGs: COG3004 Na+/H+ antiporter; HAMAP: Na+/H+ antiporter NhaA; InterPro IPR004670; KEGG: mtt:Ftrac_2078 sodium/proton antiporter, NhaA family; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA; TIGRFAM: Na+/H+ antiporter NhaA
YP_004776485.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: zpr:ZPR_3398 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR:  NADH dehydrogenase
YP_004776486.1	KEGG: zpr:ZPR_3396 hypothetical protein; SPTR: Membrane protein
YP_004776487.1	KEGG: mtt:Ftrac_2081 hypothetical protein; SPTR:  uncharacterized protein
YP_004776488.1	KEGG: mtt:Ftrac_2082 hypothetical protein; SPTR:  uncharacterized protein
YP_004776489.1	KEGG: mtt:Ftrac_2083 hypothetical protein; SPTR:  uncharacterized protein
YP_004776490.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_2084 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein
YP_004776491.1	PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: mtt:Ftrac_2085 nitrogen regulatory protein p-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II
YP_004776492.1	PFAM: Predicted membrane protein (DUF2078); InterPro IPR018649; KEGG: mtt:Ftrac_2086 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR:  uncharacterized protein
YP_004776493.1	PFAM: YHS domain; InterPro IPR007029; KEGG: mtt:Ftrac_2087 yhs domain-containing protein; PFAM: YHS; SPTR: YHS domain-containing protein
YP_004776494.1	PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: mtt:Ftrac_2088 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR:  uncharacterized protein
YP_004776495.1	KEGG: mtt:Ftrac_2089 hypothetical protein; SPTR:  uncharacterized protein
YP_004776496.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2090 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776497.1	KEGG: mtt:Ftrac_2091 hypothetical protein; SPTR:  uncharacterized protein
YP_004776498.1	KEGG: mtt:Ftrac_2092 membrane protein; SPTR: Membrane protein
YP_004776499.1	PFAM: Ion channel; InterPro IPR013099; KEGG: gfo:GFO_1177 hypothetical protein; PFAM: Ion transport 2; SPTR:  uncharacterized protein
YP_004776500.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgi:PG1658 ISPg4, transposase; PFAM: Transposase, IS4-like; SPTR: ISPg4, transposase
YP_004776501.1	PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: gfo:GFO_1248 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; SPTR: Ferredoxin-dependent glutamate synthase
YP_004776502.1	PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: mtt:Ftrac_2098 amino acid/polyamine/organocation transporter, apc superfamily; PFAM: Amino acid permease-associated region; SPTR: Amino acid/polyamine/organocation transporter, APC superfamily
YP_004776503.1	PFAM: Rhodanese-like domain; InterPro IPR001763; KEGG: mtt:Ftrac_2100 rhodanese domain protein; SMART: Rhodanese-like; SPTR: Rhodanese domain protein
YP_004776504.1	PFAM: Predicted membrane protein (DUF2078); InterPro IPR018649; KEGG: mtt:Ftrac_2099 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR:  uncharacterized protein
YP_004776505.1	KEGG: mtt:Ftrac_2102 membrane or secreted protein; SPTR: Membrane or secreted protein
YP_004776506.1	KEGG: mtt:Ftrac_2103 hypothetical protein; SPTR:  uncharacterized protein
YP_004776507.1	PFAM: Domain of unknown function DUF302; InterPro IPR005180; KEGG: rbi:RB2501_04705 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR:  uncharacterized protein
YP_004776508.1	PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: mtt:Ftrac_2105 hypothetical protein; PFAM: Protein of unknown function DUF302; SPTR:  uncharacterized protein
YP_004776509.1	PFAM: Domain of unknown function (DUF305); InterPro IPR005183; KEGG: zpr:ZPR_4065 hypothetical protein; PFAM: Protein of unknown function DUF305; SPTR: Membrane protein
YP_004776510.1	PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; COGs: COG2132  multicopper oxidase; InterPro IPR011707:IPR001117:IPR011706; KEGG: mtt:Ftrac_2106 multicopper oxidase type 3; PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 1; Multicopper oxidase, type 2; SPTR: Multicopper oxidase type 3
YP_004776511.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgi:PG1658 ISPg4, transposase; PFAM: Transposase, IS4-like; SPTR: ISPg4, transposase
YP_004776512.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: mtt:Ftrac_2107 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; manually curated
YP_004776513.1	KEGG: mtt:Ftrac_2108 hypothetical protein; SPTR:  uncharacterized protein
YP_004776514.1	PFAM: Protein of unknown function (DUF3347); KEGG: mtt:Ftrac_2110 hypothetical protein; SPTR:  uncharacterized protein
YP_004776515.1	PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mtt:Ftrac_2111 efflux transporter, rnd family, mfp subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004776516.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mtt:Ftrac_2112 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein
YP_004776517.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696  silver efflux pump; InterPro IPR001036; KEGG: mtt:Ftrac_2113 acriflavin resistance protein; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein
YP_004776518.1	KEGG: mtt:Ftrac_2114 hypothetical protein; SPTR:  uncharacterized protein
YP_004776520.1	KEGG: mtt:Ftrac_2116 hypothetical protein; SPTR:  uncharacterized protein
YP_004776521.1	PFAM: YceI-like domain; InterPro IPR007372; KEGG: zpr:ZPR_0535 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Secreted protein
YP_004776522.1	PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: chu:CHU_1181 response regulator, positive activator of UhpT transcription; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family
YP_004776523.1	PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: phe:Phep_1791 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase
YP_004776524.1	KEGG: osp:Odosp_2005 transposon-related/mobilization protein; SPTR:  uncharacterized protein
YP_004776525.1	PFAM: Virulence-associated protein E; COGs: COG5545 P-loop ATPase and inactivated derivatives; InterPro IPR007936; KEGG: fps:FP0491 hypothetical protein; PFAM: Virulence-associated E; SPTR:  uncharacterized protein
YP_004776528.1	PFAM: Fumarylacetoacetate (FAA) hydrolase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: mtt:Ftrac_0978 fumarylacetoacetate (faa) hydrolase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: Fumarylacetoacetate hydrolase
YP_004776529.1	PFAM: Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: mtt:Ftrac_0979 peptidase M23; PFAM: Peptidase M23; SPTR:  peptidase
YP_004776530.1	PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: mtt:Ftrac_0980 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Bacterioferritin comigratory protein
YP_004776531.1	PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: shg:Sph21_3915 transketolase; PFAM: Transketolase, N-terminal; SPTR: Transketolase, N-subunit
YP_004776532.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: mtt:Ftrac_0983 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: Transketolase, C-subunit
YP_004776533.1	KEGG: cak:Caul_1469 hypothetical protein; SPTR:  uncharacterized protein
YP_004776534.1	SPTR:  uncharacterized protein
YP_004776536.1	PFAM: Protein of unknown function (DUF1003); COGs: COG4420 membrane protein; InterPro IPR010406; KEGG: chu:CHU_1621 hypothetical protein; PFAM: Protein of unknown function DUF1003; SPTR:  uncharacterized protein
YP_004776538.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776539.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR005148:IPR015945:IPR008909:IPR001278; KEGG: chu:CHU_1577 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic
YP_004776540.1	PFAM: Glutathione peroxidase; COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: sli:Slin_0040 peroxiredoxin; PFAM: Glutathione peroxidase; SPTR: Glutathione peroxidase
YP_004776541.1	PFAM: UbiA prenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR000537:IPR004657; KEGG: dfe:Dfer_2681 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_004776542.1	PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_3238 UspA domain-containing protein; PFAM: UspA; SPTR:  universal stress protein
YP_004776543.1	PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, , prokaryotic; COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: mtt:Ftrac_0168 translation initiation factor 1 (eif-1/SUI1); PFAM: Translation initiation factor SUI1; SPTR:  translation initiation factor SUI1
YP_004776544.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; COGs: COG0373 Glutamyl-tRNA reductase; KEGG: dfe:Dfer_2489 glutamyl-tRNA reductase; SPTR: Glutamyl-tRNA reductase
YP_004776545.1	PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329  transposase; SPTR:  transposase
YP_004776546.1	PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: ATP phosphoribosyltransferase; Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR013820:IPR013115:IPR020621; KEGG: mtt:Ftrac_0079 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal
YP_004776547.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: mtt:Ftrac_0078 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type
YP_004776548.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839:IPR005861; KEGG: dfe:Dfer_1138 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase
YP_004776549.1	PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase domain; histidinol-phosphatase; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR005954:IPR006543; KEGG: lby:Lbys_0035 imidazoleglycerol-phosphate dehydratase; histidinol-phosphate phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase
YP_004776550.1	PFAM: Transposase domain (DUF772); KEGG: bsa:Bacsa_3329  transposase; SPTR:  transposase
YP_004776551.1	PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR004155:IPR013427; KEGG: sli:Slin_6210 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SMART: PBS lyase HEAT-like repeat; SPTR: Heme-binding protein; TIGRFAM:  haem-binding region
YP_004776552.1	PFAM: HEAT repeat; TIGRFAM:  heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR013427; KEGG: sli:Slin_6210 heme-binding protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Heme-binding domain-containing protein; TIGRFAM:  haem-binding region
YP_004776553.1	PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: N-acylglucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; SPTR: N-acylglucosamine 2-epimerase superfamily
YP_004776554.1	PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: dfe:Dfer_3380 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family
YP_004776555.1	PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: cat:CA2559_07981 TonB; PFAM: Peptidase M56, BlaR1; SPTR:  uncharacterized protein
YP_004776556.1	PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; InterPro IPR002305:IPR002307; KEGG: mtt:Ftrac_0320 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial
YP_004776557.1	PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: bcy:Bcer98_3198 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Regulatory protein, TetR
YP_004776559.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: carbonyl reductase (NADPH); PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase
YP_004776560.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: mtt:Ftrac_2469 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; TIGRFAM: Ribonuclease BN
YP_004776561.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mtt:Ftrac_0161 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase
YP_004776562.1	PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: psn:Pedsa_2501 patatin; PFAM: Patatin; SPTR: Phospholipase; manually curated
YP_004776563.1	PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR020582:IPR001095; KEGG: mtt:Ftrac_0182 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit
YP_004776564.1	PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: phe:Phep_3012 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system
YP_004776565.1	PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; InterPro IPR013650:IPR005811:IPR005809; KEGG: mtt:Ftrac_0713 succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit
YP_004776566.1	PFAM: Transposase; SPTR:  uncharacterized protein
YP_004776567.1	PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; InterPro IPR008756; KEGG: TonB family protein; PFAM: Peptidase M56, BlaR1; SPTR:  uncharacterized protein
YP_004776568.1	KEGG: dfe:Dfer_3033  acetyl xylan esterase; SPTR:  acetyl xylan esterase domain protein
YP_004776569.1	PFAM: D-mannonate dehydratase (UxuA); COGs: COG1312 D-mannonate dehydratase; InterPro IPR004628; KEGG: sli:Slin_3895 mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase
YP_004776570.1	PFAM: Neutral/alkaline non-lysosomal ceramidase; KEGG: psl:Psta_1770 hypothetical protein; SPTR:  uncharacterized protein
YP_004776571.1	PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: cly:Celly_1756 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR:  uncharacterized protein
YP_004776572.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR020829:IPR006424; KEGG: ttu:TERTU_2710 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I
YP_004776574.1	PFAM: Sodium Bile acid symporter family; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: cao:Celal_0356 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid transporter family protein
YP_004776575.1	PFAM: Acyltransferase; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: cao:Celal_0355 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR:  acyltransferase
YP_004776576.1	PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: chu:CHU_0303 carbonate dehydratase; PFAM: Carbonic anhydrase; SPTR: Carbonic anhydrase
YP_004776578.1	PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: mtt:Ftrac_1659 gh3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter
YP_004776579.1	PFAM: Bacterial protein of unknown function (DUF894); InterPro IPR011701; KEGG: cyc:PCC7424_2024 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1
YP_004776580.1	KEGG: zpr:ZPR_4604 hypothetical protein; SPTR: Membrane protein
YP_004776581.1	KEGG: amr:AM1_0870 hypothetical protein; SPTR: Lipoprotein
YP_004776582.1	PFAM: BCCT family transporter; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: cao:Celal_0592 BCCT transporter; PFAM: BCCT transporter; SPTR: BCCT transporter
YP_004776583.1	KEGG: fba:FIC_00796 hypothetical protein; SPTR:  uncharacterized protein
YP_004776584.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: cpi:Cpin_6279 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR:  uncharacterized protein
YP_004776585.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: mtt:Ftrac_1802 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR:  uncharacterized protein
YP_004776586.1	KEGG: cao:Celal_1798 hypothetical protein; SPTR:  uncharacterized protein
YP_004776587.1	PFAM: SusD family; InterPro IPR012944; KEGG: cly:Celly_1278 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain-containing protein
YP_004776588.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: cly:Celly_1277 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004776589.1	PFAM: 7TM diverse intracellular signalling; 7TMR-DISM extracellular 2; InterPro IPR011622:IPR011623; KEGG: mtt:Ftrac_1806 diverse 7tm receptor transmembrane region; PFAM: Diverse 7TM receptor, transmembrane region; Diverse 7TM receptor, extracellular region 2; SPTR: Diverse 7TM receptor transmembrane region
YP_004776590.1	KEGG: dfe:Dfer_2260 hypothetical protein; SPTR:  uncharacterized protein
YP_004776591.1	PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: zpr:ZPR_2263 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver domain-containing protein
YP_004776593.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; InterPro IPR006311; KEGG: sli:Slin_5368 hypothetical protein; SPTR:  uncharacterized protein
YP_004776594.1	InterPro IPR003088; KEGG: fbc:FB2170_05305  large, multifunctional secreted protein; PFAM: Cytochrome c, class I; SPTR:  large, multifunctional secreted protein
YP_004776595.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dfe:Dfer_1780 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase
YP_004776596.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_1706 sulfatase; PFAM: Sulfatase; SPTR: Heparan N-sulfatase
YP_004776597.1	PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: phe:Phep_0378 non-specific serine/threonine protein kinase; PFAM: Sulphatase-modifying factor; SPTR: Non-specific serine/threonine protein kinase
YP_004776598.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_03330  sulfatase AtsG; PFAM: Sulfatase; SPTR: Probable sulfatase atsG
YP_004776599.1	KEGG: dfe:Dfer_2566 hypothetical protein; SPTR:  uncharacterized protein
YP_004776600.1	PFAM: Radical SAM superfamily; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: fps:FP1407 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein
YP_004776601.1	KEGG: mtt:Ftrac_1820 hypothetical protein; SPTR:  uncharacterized protein
YP_004776602.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02130 arylsulfatase A; PFAM: Sulfatase; SPTR: Arylsulfatase A
YP_004776603.1	PFAM: Glycosyl hydrolase 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: ote:Oter_3704 glycoside hydrolase; PFAM: Glycoside hydrolase, family 10; SMART: Glycoside hydrolase, family 10; SPTR: Glycoside hydrolase 10
YP_004776604.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB5195 N-acetylgalactosamine 6-sulfatase (GALNS); PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase (GALNS)
YP_004776605.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1389 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004776606.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1390 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug
YP_004776607.1	PFAM: Sulfatase; TIGRFAM: choline-sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_01941 iduronate-2-sulfatase; PFAM: Sulfatase; SPTR: Iduronate-2-sulfatase
YP_004776608.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2085 N-acetylgalactosamine-4-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine 6-sulfate sulfatase (GALNS)
YP_004776609.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4497 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004776610.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6286 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776611.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_3803 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR
YP_004776612.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: bfs:BF4271  ECF-type RNA polymerase; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004776613.1	PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; InterPro IPR018946; KEGG: pbs:Plabr_4307 alkaline phosphatase D; PFAM: Alkaline phosphatase D-related; SPTR: Probable alkaline phosphatase D
YP_004776614.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_1498 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004776615.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776616.1	PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: rba:RB88 alkaline phosphatase D; SPTR: Probable alkaline phosphatase D [Precursor]
YP_004776617.1	PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; InterPro IPR018946; KEGG: pbs:Plabr_4307 alkaline phosphatase D; PFAM: Alkaline phosphatase D-related; SPTR: Probable alkaline phosphatase D
YP_004776618.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2218 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004776619.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2262 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004776620.1	PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_0908 hypothetical protein; PFAM: RagB/SusD; SPTR:  uncharacterized protein
YP_004776621.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910; KEGG: bfr:BF4448 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR:  outer membrane protein probably involved in nutrient binding
YP_004776622.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_0626  anti-sigma factor; PFAM: FecR protein; SPTR:  uncharacterized protein
YP_004776623.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: zpr:ZPR_0255 ECF-type RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR:  ECF-type RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004776624.1	PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dbr:Deba_3117 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase
YP_004776625.1	PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: shg:Sph21_0576 mannonate dehydratase; PFAM: Mannonate dehydratase; SPTR: Mannonate dehydratase 2; TIGRFAM: Mannonate dehydratase
YP_004776626.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: dfe:Dfer_4303 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004776627.1	PFAM: Trehalose utilisation; KEGG: sli:Slin_0069 Crp/FNR family transcriptional regulator; SPTR: Crp/FNR family transcriptional regulator
YP_004776628.1	KEGG: shg:Sph21_0631 hypothetical protein; SPTR:  uncharacterized protein
YP_004776629.1	PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: sli:Slin_0352 LacI family transcriptional regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family
YP_004776630.1	PFAM: Prolyl oligopeptidase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR001375; KEGG: sli:Slin_0766 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Probable acylaminoacyl-peptidase
YP_004776631.1	PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: sli:Slin_2721 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Regulatory protein AsnC
YP_004776632.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR010231; KEGG: mtt:Ftrac_0906 iron-regulated ABC transporter membrane component sufb; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB
YP_004776633.1	PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439:IPR003593:IPR010230; KEGG: chu:CHU_0977 iron-regulated ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly
YP_004776634.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR011542; KEGG: mtt:Ftrac_0909 fes assembly protein sufd; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD
YP_004776635.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192:IPR010970; KEGG: dfe:Dfer_5780 cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS
YP_004776636.1	PFAM: Fe-S metabolism associated domain; COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: mtt:Ftrac_0911 cysteine desulfuration protein SufE; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism protein, SufE family
YP_004776637.1	PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: mtt:Ftrac_0912 fes assembly suf system protein; PFAM: Protein of unknown function DUF59; SPTR: Metal-sulfur cluster biosynthetic enzyme
YP_004776638.1	PFAM: Protein of unknown function (DUF1094); InterPro IPR009474; KEGG: mtt:Ftrac_0913 hypothetical protein; PFAM: Uncharacterised protein family UPF0403; SPTR:  uncharacterized protein
YP_004776639.1	PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); COGs: COG0372 Citrate synthase; InterPro IPR002020:IPR010953; KEGG: mtt:Ftrac_0875 citrate synthase I; PFAM: Citrate synthase-like; SPTR: Citrate synthase; TIGRFAM: Citrate synthase, type II
YP_004776640.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR005580:IPR014001; KEGG: dfe:Dfer_0202 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH family
YP_004776641.1	KEGG: rbi:RB2501_12097 hypothetical protein; SPTR:  uncharacterized protein
YP_004776642.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG1893 Ketopantoate reductase; InterPro IPR013332:IPR013752; KEGG: fps:FP1582 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; SPTR: 2-dehydropantoate 2-reductase
YP_004776643.1	PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: geo:Geob_2035 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11
YP_004776647.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: gfo:GFO_1545 oxidoreductase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase
YP_004776648.1	PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013655:IPR003018:IPR013656:IPR003661:IPR 003594:IPR000014:IPR001610; KEGG: mtt:Ftrac_0408 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; PAS fold-3; GAF; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; manually curated
YP_004776649.1	PFAM: PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2202 FOG: PAS/PAC domain; InterProIPR013655:IPR013767:IPR003018:IPR000014:IPR 001610; KEGG: mtt:Ftrac_2274 multi-sensor signal transduction histidine kinase; PFAM: PAS fold-3; PAS fold; SMART: PAC motif; PAS; GAF; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004776650.1	PFAM: Oxidoreductase, C-terminal alpha/beta domain; Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: plm:Plim_2198 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Dehydrogenase
YP_004776651.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: oih:OB3261 oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family
YP_004776652.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: tsa:AciPR4_0496 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein
YP_004776653.1	PFAM: Heparinase II/III-like protein; InterPro IPR012480:IPR006626; KEGG: psn:Pedsa_1818 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR:  uncharacterized protein
YP_004776654.1	PFAM: SusD family; InterPro IPR012944; KEGG: RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004776655.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004776656.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: cly:Celly_2996 anti-FecI sigma factor FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR
YP_004776657.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: phe:Phep_1502 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004776658.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_2992 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776659.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: cly:Celly_2848 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004776660.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR004839; KEGG: shg:Sph21_1490 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family
YP_004776661.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544:IPR005786; KEGG: lby:Lbys_1077 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; SPTR: Branched-chain amino acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase II
YP_004776662.1	PFAM: RF-1 domain; COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: sli:Slin_6283 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Peptidyl-tRNA hydrolase domain protein
YP_004776663.1	KEGG: cao:Celal_1410 hypothetical protein; SPTR:  uncharacterized protein
YP_004776664.1	PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR001140:IPR003439:IPR003593; KEGG: mtt:Ftrac_2492 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; SMART: ATPase, AAA+ type, core; SPTR: Lipid A export ATP-binding/permease MsbA
YP_004776666.1	PFAM: Flavin containing amine oxidoreductase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937; KEGG: mtt:Ftrac_0516 amine oxidase; PFAM: Amine oxidase; SPTR: Amine oxidase, flavin-containing
YP_004776667.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR014001; KEGG: psn:Pedsa_0406 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family
YP_004776668.1	COGs: COG4270 membrane protein; KEGG: lbl:LBL_0554 hypothetical protein; SPTR:  uncharacterized protein
YP_004776669.1	KEGG: aeh:Mlg_1762 hypothetical protein; SPTR:  uncharacterized protein
YP_004776670.1	PFAM: ATPase associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: fjo:Fjoh_3168 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA superfamily ATPase
YP_004776671.1	PFAM: Tetratricopeptide repeat; InterPro IPR013105:IPR001440:IPR019734; KEGG: dfe:Dfer_0662 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR:  uncharacterized protein
YP_004776672.1	KEGG: dfe:Dfer_0663 hypothetical protein; SPTR:  uncharacterized protein
YP_004776673.1	PFAM:  peptidoglycan binding domain; InterPro IPR002477; KEGG: fjo:Fjoh_3165 hypothetical protein; PFAM: Peptidoglycan binding-like; SPTR:  uncharacterized protein
YP_004776674.1	KEGG: fjo:Fjoh_3161 hypothetical protein; SPTR:  uncharacterized protein
YP_004776675.1	KEGG: fjo:Fjoh_3160 hypothetical protein; SPTR:  uncharacterized protein
YP_004776676.1	KEGG: fjo:Fjoh_3159 hypothetical protein; SPTR:  uncharacterized protein
YP_004776677.1	KEGG: fjo:Fjoh_3158 hypothetical protein; SPTR:  uncharacterized protein
YP_004776678.1	PFAM: Gene 25-like lysozyme; COGs: COG3628 Phage baseplate assembly protein W; InterPro IPR007048; KEGG: fjo:Fjoh_3157 gpW/GP25 family protein; PFAM: GPW/gp25; SPTR:  tail lysozyme
YP_004776679.1	PFAM: PAAR motif; InterPro IPR008727; KEGG: fjo:Fjoh_3156 PaaR repeat-containing protein; PFAM: PAAR motif; SPTR:  uncharacterized protein
YP_004776680.1	PFAM: Phage late control gene D protein (GPD); Phage-related baseplate assembly protein; TIGRFAM: Rhs element Vgr protein; COGs: COG3500 Phage protein D; InterPro IPR006533; KEGG: fjo:Fjoh_3155 rhs element Vgr protein; PFAM: Rhs element Vgr protein; SPTR: Rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein
YP_004776681.1	KEGG: fjo:Fjoh_3154 hypothetical protein; SPTR:  uncharacterized protein
YP_004776682.1	SPTR:  uncharacterized protein
YP_004776683.1	PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein; InterPro IPR011747; KEGG: fjo:Fjoh_3152 phage tail protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein
YP_004776684.1	PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein; InterPro IPR011747; KEGG: fjo:Fjoh_3151 phage tail protein; PFAM: Conserved hypothetical protein CHP02241, phage tail region protein; SPTR: Conserved hypothetical phage tail protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein
YP_004776685.1	PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: fjo:Fjoh_3150 phage tail sheath protein fi-like protein; SPTR: Phage tail sheath protein FI-like protein
YP_004776686.1	KEGG: fjo:Fjoh_3149 hypothetical protein; SPTR:  uncharacterized protein
YP_004776687.1	KEGG: fjo:Fjoh_3148 hypothetical protein; SPTR:  uncharacterized protein
YP_004776689.1	PFAM: Flavodoxin-like fold; COGs: COG2249  NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cat:CA2559_10213 probable NADP(H) oxidoreductase; PFAM: Flavodoxin-like fold; SPTR: Glutathione-regulated potassium-efflux system ancillary protein KefF
YP_004776690.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR003148:IPR004771; KEGG: chu:CHU_3068 potassium efflux system protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: K+/H+ exchanger
YP_004776692.1	PFAM: Domain of unknown function (DUF74); COGs: COG0393 conserved hypothetical protein; HAMAP: UPF0145 protein ybjQ; InterPro IPR002765; KEGG: dtu:Dtur_0452 protein of unknown function DUF74; PFAM: Uncharacterised protein family UPF0145; SPTR: UPF0145 protein BBFL7_00698
YP_004776693.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: srm:SRM_00590 TonB protein; SPTR: TonB protein; TIGRFAM: TonB, C-terminal
YP_004776694.1	PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: fjo:Fjoh_0046 YdjC family protein; PFAM: YdjC-like protein; SPTR: YdjC family protein
YP_004776695.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: dfe:Dfer_5411 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR:  uncharacterized protein
YP_004776696.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818:IPR000005:IPR018060; KEGG: shg:Sph21_0213 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain; SPTR: Helix-turn-helix-domain containing protein AraC type
YP_004776697.1	PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: phe:Phep_1224 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR:  uncharacterized protein
YP_004776698.1	PFAM: Protein of unknown function (DUF541); COGs: COG2859 conserved hypothetical protein; InterPro IPR007497; KEGG: rbi:RB2501_03075 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR:  uncharacterized protein
YP_004776699.1	KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776700.1	PFAM: Protein of unknown function (DUF3253)
YP_004776701.1	PFAM: Radical SAM superfamily; COGs: COG1533 DNA repair photolyase; InterPro IPR007197:IPR006638; KEGG: shg:Sph21_1055 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM superfamily protein
YP_004776702.1	COGs: COG3963 Phospholipid N-methyltransferase; InterPro IPR013217; KEGG: cbe:Cbei_3305 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Ribosomal RNA adenine dimethylase phospholipid N-methyltransferase
YP_004776703.1	PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase
YP_004776704.1	PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase
YP_004776705.1	PFAM: Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rmr:Rmar_2106 amidohydrolase; PFAM: Amidohydrolase 1; SPTR:  amidohydrolase
YP_004776706.1	PFAM: NlpC/P60 family; Bacterial SH3 domain; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: cly:Celly_1309 NLP/P60 protein; PFAM: NLP/P60; SPTR: Pipeptidyl-peptidase VI
YP_004776707.1	PFAM: PA domain; Peptidase M28; Transferrin receptor-like dimerisation domain; COGs: COG2234 aminopeptidase; InterPro IPR003137:IPR007484; KEGG: rbi:RB2501_14204 hypothetical protein; PFAM: Peptidase M28; Protease-associated PA; SPTR: Glutamate carboxypeptidase II
YP_004776708.1	PFAM:  RNA methylase UPF0020; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR000241; KEGG: dfe:Dfer_0401  RNA methylase; PFAM:  RNA methylase; SPTR: RNA methylase
YP_004776709.1	COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: Molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein BA
YP_004776710.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: molybdenum cofactor biosynthesis protein C; PFAM: Molybdopterin cofactor biosynthesis MoaC region; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region
YP_004776711.1	PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: cpi:Cpin_0229 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Cysteine desulfurase
YP_004776712.1	PFAM: Subtilase; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: sru:SRU_0565 serine protease / subtilase peptidase; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Subtilisin Novo (E.C.)
YP_004776713.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277:IPR006235; KEGG: mtt:Ftrac_1143 O-acetylhomoserine sulfhydrolase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: O-acetylhomoserine (Thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase
YP_004776714.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073:IPR006296; KEGG: lby:Lbys_3238 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Homoserine O-acetyltransferase; TIGRFAM: Homoserine O-acetyltransferase
YP_004776715.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: mtt:Ftrac_1458 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004776716.1	PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: shg:Sph21_2903 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphodiester phosphodiesterase
YP_004776717.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; PA14 domain; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591:IPR011658; KEGG: dfe:Dfer_3093 PA14 domain protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; PA14; SMART: PA14; SPTR:  uncharacterized protein
YP_004776718.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR001608:IPR011079:IPR000821; KEGG: mtt:Ftrac_0653 alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; SPTR: Alanine racemase 1; TIGRFAM: Alanine racemase
YP_004776719.1	KEGG: mtt:Ftrac_0654 hypothetical protein; SPTR:  uncharacterized protein
YP_004776720.1	KEGG: mtt:Ftrac_0655 hypothetical protein; SPTR:  uncharacterized protein
YP_004776721.1	KEGG: phe:Phep_4210 hypothetical protein; SPTR:  acetyltransferase
YP_004776722.1	PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518; KEGG: mtt:Ftrac_1530 argininosuccinate synthase; PFAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase
YP_004776723.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; InterPro IPR000534:IPR012280:IPR000706; KEGG: mtt:Ftrac_1531 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase 1; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase
YP_004776724.1	PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: wvi:Weevi_0301 acetylornithine transaminase; PFAM: Aminotransferase class-III; SPTR: Acetylornithine transaminase
YP_004776725.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132:IPR006131; KEGG: mtt:Ftrac_1532 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; SPTR: Ornithine carbamoyltransferase
YP_004776726.1	PFAM: Amino acid kinase; TIGRFAM: acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048:IPR004662; KEGG: mtt:Ftrac_1533 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase
YP_004776727.1	PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: mtt:Ftrac_1534 peptidase M20; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Acetylornithine deacetylase
YP_004776728.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR000362:IPR009049; KEGG: mtt:Ftrac_1535 argininosuccinate lyase; PFAM: Fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase
YP_004776730.1	PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mtt:Ftrac_1872 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1
YP_004776731.1	KEGG: cao:Celal_1187 hypothetical protein; SPTR:  uncharacterized protein
YP_004776732.1	COGs: COG3530 conserved hypothetical protein; KEGG: phe:Phep_0021 hypothetical protein; SPTR:  uncharacterized protein
YP_004776733.1	PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_3022 TonB dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent receptor
YP_004776734.1	KEGG: zpr:ZPR_3020 hypothetical protein
YP_004776736.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154:IPR013149; KEGG: mtt:Ftrac_2346 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; SPTR: Alcohol dehydrogenase zinc-binding domain protein
YP_004776737.1	PFAM: Domain of unknown function (DUF336); COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: fps:FP1758 hypothetical protein; PFAM: Protein of unknown function DUF336; SPTR: PduO protein
YP_004776738.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR013096:IPR000005:IPR018060; KEGG: sli:Slin_0508 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; Cupin 2, conserved barrel; SMART: Helix-turn-helix, AraC domain; SPTR:  transcriptional activator MltR
YP_004776739.1	PFAM: Trehalose utilisation; Copper binding proteins, plastocyanin/azurin family; TIGRFAM:  membrane-bound dehydrogenase domain; COGs: COG3828 conserved hypothetical protein; InterPro IPR009381:IPR000923:IPR013428; KEGG: dfe:Dfer_1437 membrane-bound dehydrogenase domain protein; PFAM: Blue (type 1) copper domain; Protein of unknown function DUF1037; SPTR: Probable secreted glycosyl hydrolase; TIGRFAM:  membrane-bound dehydrogenase
YP_004776740.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: aau:AAur_1891  sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR:  sugar phosphate isomerase/epimerase
YP_004776741.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: sli:Slin_0510 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR:  NADH-dependent oxidoreductase- glucose-fructose dependent oxidoreductase
YP_004776742.1	PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153:IPR006037; KEGG: cao:Celal_0277 potassium/proton antiporter, cpa1 family; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; SPTR: Sodium/hydrogen exchanger family/TrkA domain protein
YP_004776743.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR003661:IPR003594:IPR001610:IPR 000014; KEGG: nit:NAL212_1289 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004776744.1	PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: cly:Celly_0215 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver
YP_004776745.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR013767:IPR003661:IPR003594:IPR001610:IPR 000014; KEGG: nit:NAL212_1289 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004776746.1	PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: cly:Celly_0215 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver
YP_004776747.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_15673 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase
YP_004776748.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2268 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004776749.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910:IPR000531; KEGG: dfe:Dfer_2267 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein, probably involved in nutrient binding
YP_004776750.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_1774  anti-sigma factor; PFAM: FecR protein; SPTR:  uncharacterized protein
YP_004776751.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: phe:Phep_2251 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004776752.1	PFAM: Uncharacterized ACR, YdiU/UPF0061 family; COGs: COG0397 conserved hypothetical protein; HAMAP: UPF0061 protein ydiU; InterPro IPR003846; KEGG: cly:Celly_3131 hypothetical protein; PFAM: Uncharacterised protein family UPF0061; SPTR: UPF0061 protein ydiU
YP_004776753.1	KEGG: fbc:FB2170_01497 hypothetical protein; SPTR:  uncharacterized protein
YP_004776754.1	PFAM: Protein of unknown function (DUF3703); KEGG: chu:CHU_0726 hypothetical protein; SPTR:  uncharacterized protein
YP_004776755.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_2884 sulfatase; PFAM: Sulfatase; SPTR: Probable sulfatase atsG
YP_004776756.1	PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_0688 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004776757.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_0460 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  outer membrane protein
YP_004776758.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bvu:BVU_0626  anti-sigma factor; PFAM: FecR protein; SPTR:  uncharacterized protein
YP_004776759.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284:IPR014327; KEGG: phe:Phep_3382 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004776760.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: zpr:ZPR_3683 dehydrogenase and relate protein; PFAM: Oxidoreductase, N-terminal; SPTR:  dehydrogenase and relate protein
YP_004776761.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rba:RB4707 large multifunctional protein-glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR:  uncharacterized protein
YP_004776762.1	PFAM: PepSY-associated TM helix; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: cpi:Cpin_0020 uncharacterized iron-regulated membrane protein; PFAM: PepSY-associated TM helix; SPTR:  uncharacterized protein
YP_004776763.1	PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013987:IPR013988:IPR004624; KEGG: lby:Lbys_2347 alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SPTR: Alkylphosphonate utilization operon protein PhnA; TIGRFAM: PhnA protein
YP_004776764.1	PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; COGs: COG1201 Lhr-like helicase; InterPro IPR011545:IPR001650:IPR013701:IPR014001; KEGG: mtt:Ftrac_0771 ATP dependent helicase, lhr family; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Helicase domain protein
YP_004776765.1	PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR012938; KEGG: zpr:ZPR_1474 glucose/sorbosone dehydrogenase; SPTR: Glucose/sorbosone dehydrogenase
YP_004776766.1	PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR011533; KEGG: dba:Dbac_2822 choline dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; SPTR: Choline dehydrogenase; TIGRFAM: Choline dehydrogenase
YP_004776767.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: glycine betaine aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: drt:Dret_0129 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Betaine aldehyde dehydrogenase
YP_004776768.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: bld:BLi03272 hypothetical protein; PFAM: Sodium/solute symporter; SPTR: Proline transporter
YP_004776769.1	PFAM: Inosine-uridine preferring nucleoside hydrolase; InterPro IPR001910; KEGG: dfe:Dfer_1840 inosine/uridine-preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine/uridine-preferring nucleoside hydrolase
YP_004776770.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766; KEGG: ant:Arnit_3065 thiamine pyrophosphate protein domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; SPTR: Thiamine pyrophosphate enzyme
YP_004776771.1	PFAM: Aldehyde dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: abu:Abu_2148 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
YP_004776772.1	PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: gfo:GFO_0944 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR:  uncharacterized protein
YP_004776773.1	PFAM: Protein of unknown function (DUF1697); COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: mtt:Ftrac_1982 hypothetical protein; PFAM: Protein of unknown function DUF1697; SPTR:  uncharacterized protein
YP_004776774.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: fjo:Fjoh_2198 alpha/beta hydrolase domain-containing protein; SPTR: Peptidase S9-like protein
YP_004776775.1	PFAM: O-methyltransferase; COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: O-methyltransferase 3; PFAM: O-methyltransferase, family 3; SPTR: O-methyltransferase
YP_004776776.1	PFAM: Protein of unknown function (DUF1569); KEGG: psn:Pedsa_1903 hypothetical protein; SPTR:  uncharacterized protein
YP_004776778.1	SPTR:  uncharacterized protein
YP_004776779.1	KEGG: pbs:Plabr_4764 hypothetical protein; SPTR:  uncharacterized protein
YP_004776780.1	PFAM: Cytochrome c; Membrane bound L-sorbosone dehydrogenase; TIGRFAM:  membrane-bound dehydrogenase domain; heme-binding domain, Pirellula/Verrucomicrobium type; InterPro IPR013428:IPR013427; KEGG: dfe:Dfer_0279 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase; haem-binding region
YP_004776782.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM:  phosphoesterase, SbcD/Mre11-related; COGs: COG1407 ICC-like phosphoesterase; InterPro IPR004843; KEGG: shg:Sph21_1110 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR:  phosphoesterase
YP_004776783.1	PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: mtt:Ftrac_0776 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Cell division protein
YP_004776784.1	PFAM: Protein of unknown function (DUF3098); KEGG: lby:Lbys_0062 hypothetical protein; SPTR:  uncharacterized protein
YP_004776785.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Undecaprenyl-diphosphatase; InterPro IPR003824; KEGG: fbc:FB2170_07684  bacitracin resistance protein; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase
YP_004776786.1	PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR002501:IPR014780; KEGG: cpi:Cpin_1673 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type
YP_004776787.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0196 FAD synthase; InterPro IPR015864:IPR015865:IPR002606; KEGG: mtt:Ftrac_0781 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Riboflavin biosynthesis protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase
YP_004776788.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165:IPR012792; KEGG: mtt:Ftrac_0782 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase; SPTR: 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit A
YP_004776789.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165:IPR012791; KEGG: mtt:Ftrac_0783 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; SPTR: 3-oxoadipate CoA-succinyl transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit B
YP_004776790.1	TIGRFAM: gliding motility-associated protein GldC; InterPro IPR019854; KEGG: mtt:Ftrac_0785 gliding motility-associated protein gldc; SPTR: Gliding motility-associated protein GldC; TIGRFAM: Gliding motility-associated protein, GldC
YP_004776791.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_3123 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor
YP_004776792.1	KEGG: cat:CA2559_04355 hypothetical protein; SPTR:  uncharacterized protein
YP_004776793.1	COGs: COG2068 Uncharacterized MobA-related protein; KEGG: cpi:Cpin_4136 hypothetical protein; SPTR:  uncharacterized protein
YP_004776794.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: psn:Pedsa_1792 glucosamine/galactosamine-6-phosphate isomerase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine/galactosamine-6-phosphate isomerase
YP_004776795.1	COGs: COG4299 conserved hypothetical protein; InterPro IPR019259; KEGG: dfe:Dfer_3263 hypothetical protein; PFAM: Protein of unknown function DUF2261, transmembrane; SPTR:  uncharacterized protein
YP_004776796.1	PFAM: GAF domain; InterPro IPR003018; KEGG: npu:Npun_F1752 GAF sensor protein; PFAM: GAF; SPTR:  GAF sensor protein
YP_004776797.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: mtt:Ftrac_0464 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: RNA methyltransferase, RsmE family; TIGRFAM: Ribosomal RNA small subunit methyltransferase E
YP_004776798.1	PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR003329:IPR004528; KEGG: rbi:RB2501_12879 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_004776799.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR000383:IPR013736:IPR005674; KEGG: gfo:GFO_2152 carboxylesterase; PFAM: Peptidase S15/CocE/NonD, C-terminal; Peptidase S15; SPTR: Alpha-amino acid ester hydrolase; TIGRFAM: CocE/NonD hydrolase
YP_004776800.1	PFAM: Ferritin-like domain; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: mtt:Ftrac_3766 ferritin dps family protein; PFAM: Ferritin/Dps protein; SPTR: Nonheme iron-containing ferritin
YP_004776801.1	PFAM: Isochorismatase; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: Nicotinamidase; PFAM: Isochorismatase-like; SPTR: Pyrazinamidase/nicotinamidase
YP_004776802.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM:  nicotinate phosphoribosyltransferase; COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR015977:IPR006405; KEGG: dfe:Dfer_4911 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase
YP_004776803.1	PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: mtt:Ftrac_3553 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Transporter, drug/metabolite exporter family
YP_004776804.1	PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: mtt:Ftrac_1545 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Antioxidant, AhpC/Tsa family
YP_004776805.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: zpr:ZPR_3683 dehydrogenase and relate protein; PFAM: Oxidoreductase, N-terminal; SPTR:  oxidoreductase, NAD-binding Rossmann fold protein
YP_004776806.1	PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: lby:Lbys_3008 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR:  multi-domain protein
YP_004776807.1	PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: sli:Slin_1636 aminotransferase class-III; PFAM: Aminotransferase class-III; SPTR: Acetylornithine transaminase
YP_004776808.1	KEGG: shg:Sph21_0035 hypothetical protein; SPTR: tRNA (Guanine-N(1)-)-methyltransferase
YP_004776809.1	PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); COGs: COG4502 conserved hypothetical protein; InterPro IPR010708; KEGG: fjo:Fjoh_4859 5 nucleotidase, deoxy, cytosolic type C; SPTR: 5'(3')-deoxyribonucleotidase
YP_004776810.1	PFAM: 'Cold-shock' DNA-binding domain; InterPro IPR002059:IPR011129; KEGG: sli:Slin_4054 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein
YP_004776811.1	PFAM: Acetyl xylan esterase (AXE1); COGs: COG3458 Acetyl esterase (deacetylase); InterPro IPR008391; KEGG: sli:Slin_2229 acetyl xylan esterase; PFAM: Acetyl xylan esterase; SPTR: Acetyl xylan esterase
YP_004776812.1	InterPro IPR003953:IPR006311; KEGG: dfe:Dfer_4473 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR:  uncharacterized protein
YP_004776813.1	PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: N-acylglucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; SPTR: N-acylglucosamine 2-epimerase
YP_004776814.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; COGs: COG2814 Arabinose efflux permease; InterPro IPR005828:IPR003663; KEGG: bth:BT_0436 arabinose-proton symporter; PFAM: General substrate transporter; SPTR: Arabinose-proton symporter; TIGRFAM: Sugar/inositol transporter
YP_004776815.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: sli:Slin_2020 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Chloromuconate cycloisomerase
YP_004776816.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; InterPro IPR003699; KEGG: dfe:Dfer_3300 queuosine biosynthesis protein; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2; TIGRFAM: Queuosine biosynthesis protein
YP_004776817.1	PFAM:  esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: sli:Slin_1530 esterase; PFAM:  esterase; SPTR:  esterase; manually curated
YP_004776818.1	KEGG: nve:NEMVE_v1g222496 hypothetical protein; SPTR: Predicted protein
YP_004776819.1	KEGG: fjo:Fjoh_1439 hypothetical protein; SPTR:  uncharacterized protein
YP_004776820.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: sli:Slin_1227 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; SPTR: Outer membrane protein
YP_004776821.1	KEGG: psn:Pedsa_2558 hypothetical protein; SPTR:  uncharacterized protein
YP_004776822.1	KEGG: pdi:BDI_1506 hypothetical protein; SPTR:  uncharacterized protein; manually curated
YP_004776823.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sli:Slin_1250 sulfatase; PFAM: Sulfatase; SPTR:  N-acetylglucosamine-6-sulfatase
YP_004776824.1	KEGG: cpi:Cpin_6603 hypothetical protein; SPTR:  uncharacterized protein
YP_004776825.1	PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: cao:Celal_0301 lipolytic protein g-D-S-l family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family
YP_004776826.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: mtt:Ftrac_2987 cys/met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: O-succinylhomoserine sulfhydrylase
YP_004776827.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mtt:Ftrac_1033 efflux transporter, rnd family, mfp subunit; PFAM: Secretion protein HlyD; SPTR:  membrane fusion efflux protein; TIGRFAM: Secretion protein HlyD
YP_004776828.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_1203 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR:  outer membrane efflux protein
YP_004776829.1	PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: sli:Slin_1202 aminotransferase class IV; PFAM: Aminotransferase, class IV; SPTR:  4-amino-4-deoxychorismate lyase
YP_004776830.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; COGs: COG0207 Thymidylate synthase; HAMAP: Thymidylate synthase; InterPro IPR000398; KEGG: thymidylate synthase; PFAM: Thymidylate synthase, C-terminal; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase, C-terminal
YP_004776831.1	PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: mtt:Ftrac_2490 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_004776832.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: chu:CHU_0880 tyrosine-protein kinase; SPTR:  tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein
YP_004776833.1	PFAM: Polysaccharide biosynthesis/export protein; KEGG: cat:CA2559_07225 polysaccharide export protein, BexD/CtrA/VexA family protein; SPTR: Polysaccharide export protein
YP_004776834.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: wvi:Weevi_0953 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Capsular polysaccharide biosynthesis glycosyltransferase CapM
YP_004776835.1	PFAM: FabA-like domain; COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: chu:CHU_0969 3-hydroxydecanoyl-[acyl carrier protein] dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: 3-hydroxydecanoyl-[acyl carrier protein] dehydratase
YP_004776836.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4950 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004776837.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4949 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776840.1	PFAM: Cytochrome c; InterPro IPR013428:IPR003088; KEGG: sli:Slin_3985 dehydrogenase; PFAM: Cytochrome c, class I; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM:  membrane-bound dehydrogenase
YP_004776841.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_3986 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2
YP_004776842.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase
YP_004776843.1	PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: gluconate transporter; PFAM: Gluconate transporter; SPTR: Permease, GntP family
YP_004776844.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: sus:Acid_0985 peptidyl-prolyl cis-trans isomerase, cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_004776845.1	KEGG: hypothetical protein
YP_004776846.1	COGs: COG2836 conserved hypothetical protein; KEGG: fjo:Fjoh_2541 hypothetical protein; SPTR: Membrane protein
YP_004776847.1	PFAM: FixH; InterPro IPR008620; KEGG: lby:Lbys_2756 FixH family protein; PFAM: FixH; SPTR:  uncharacterized protein
YP_004776848.1	PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: mtt:Ftrac_1619 cytochrome c oxidase accessory protein ccog; SPTR: Cytochrome c oxidase accessory protein CcoG; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG
YP_004776849.1	PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; InterPro IPR003088; KEGG: mtt:Ftrac_1618 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase, Cbb3-type, subunit III
YP_004776850.1	PFAM: Cbb3-type cytochrome oxidase component FixQ; KEGG: mtt:Ftrac_1617 hypothetical protein; SPTR:  uncharacterized protein
YP_004776851.1	PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR004677:IPR003468:IPR000883; KEGG: mtt:Ftrac_1616 cytochrome c oxidase, cbb3-type, subunit I; PFAM: Cytochrome C oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; SPTR: Cytochrome c oxidase, Cbb3-type, subunit I/II; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome C oxidase, monohaem subunit/FixO
YP_004776852.1	PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; InterPro IPR004714; KEGG: fps:FP1154 cytochrome cbb3 oxidase maturation protein CcoS; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: Cytochrome oxidase maturation protein, Cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type
YP_004776853.1	PFAM: E1-E2 ATPase; metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834; KEGG: P-type HAD superfamily ATPase; PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; SPTR: Cu(I)-translocating P-type ATPase
YP_004776854.1	SPTR:  uncharacterized protein
YP_004776855.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: shg:Sph21_1920 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  uncharacterized protein
YP_004776856.1	PFAM: SusD family; InterPro IPR012944; KEGG: gau:GAU_2998  outer membrane protein; PFAM: RagB/SusD; SPTR:  outer membrane protein
YP_004776857.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236); KEGG: afr:AFE_1693 hypothetical protein; SPTR:  uncharacterized protein
YP_004776858.1	KEGG: fbc:FB2170_17081 hypothetical protein; SPTR:  uncharacterized protein
YP_004776859.1	PFAM: Protein of unknown function, DUF399; COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: tcx:Tcr_0011 hypothetical protein; PFAM: Protein of unknown function DUF399; SPTR:  lipoprotein
YP_004776860.1	PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: mtt:Ftrac_2915 helix-turn-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein
YP_004776861.1	PFAM: Glycerophosphoryl diester phosphodiesterase; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dfe:Dfer_3215 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase
YP_004776862.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family
YP_004776863.1	KEGG: mtt:Ftrac_1951 epidermal growth-factor receptor (egfr) l domain; SPTR:  uncharacterized protein
YP_004776864.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2200); COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: mtt:Ftrac_2029 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR:  uncharacterized protein
YP_004776865.1	COGs: COG4430 conserved hypothetical protein; KEGG: hypothetical protein; SPTR:  uncharacterized protein
YP_004776866.1	PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: dma:DMR_45670 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Methyltransferase
YP_004776868.1	PFAM: Transposase IS200 like; KEGG: fjo:Fjoh_2186 transposase IS200-family protein; SPTR: Probable transposase
YP_004776872.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR003141:IPR004805:IPR004013:IPR011708; KEGG: dfe:Dfer_4916 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR:  DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit
YP_004776873.1	SPTR:  uncharacterized protein
YP_004776874.1	KEGG: caa:Caka_0611 hypothetical protein; SPTR:  uncharacterized protein
YP_004776875.1	PFAM: Planctomycete cytochrome C; KEGG: dfe:Dfer_3699 hypothetical protein; SPTR:  uncharacterized protein
YP_004776876.1	PFAM: Protein of unknown function (DUF1501); InterPro IPR006311:IPR010869; KEGG: sli:Slin_5451 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR:  uncharacterized protein
YP_004776877.1	PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); InterPro IPR011429:IPR011444; KEGG: sli:Slin_4084 hypothetical protein; PFAM: Protein of unknown function DUF1549; Cytochrome C, Planctomycete; SPTR:  uncharacterized protein
YP_004776879.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: sde:Sde_0936 50S ribosomal protein L14; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004776880.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: aca:ACP_1955 oxidoreductase, Gfo/Idh/MocA family; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family
YP_004776881.1	PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cya:CYA_2510 solute/sodium symporter (SSS) family protein; PFAM: Sodium/solute symporter; SPTR:  uncharacterized protein
YP_004776883.1	PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sli:Slin_2838 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004776884.1	PFAM: Oxidoreductase, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: dfe:Dfer_4759 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein
YP_004776885.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel
YP_004776886.1	PFAM: Glycosyl Hydrolase 88; InterPro IPR010905; KEGG: sli:Slin_2836 hypothetical protein; PFAM: Glycosyl hydrolase, family 88; SPTR:  uncharacterized protein
YP_004776887.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dfe:Dfer_4762 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776888.1	PFAM: Protein of unknown function (DUF3078); KEGG: psn:Pedsa_3095 hypothetical protein; SPTR:  uncharacterized protein
YP_004776889.1	PFAM: Domain of unknown function DUF; InterPro IPR003807; KEGG: mtt:Ftrac_3221 hypothetical protein; PFAM: Protein of unknown function DUF202; SPTR: Membrane protein
YP_004776890.1	KEGG: shg:Sph21_3625 hypothetical protein; SPTR:  uncharacterized protein
YP_004776891.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: mtt:Ftrac_0301 polyphosphate kinase; PFAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_004776892.1	PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR001241:IPR011557:IPR013506:IPR 006171:IPR002288; KEGG: mtt:Ftrac_0291 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B
YP_004776893.1	KEGG: mtt:Ftrac_1186 hypothetical protein; SPTR:  uncharacterized protein
YP_004776894.1	PFAM: FAD binding domain; FAD dependent oxidoreductase; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR013027:IPR006076; KEGG: sli:Slin_1023 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; SPTR: Oxidoreductase, FAD-dependent
YP_004776895.1	PFAM: Tryptophan 2,3-dioxygenase; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: cpi:Cpin_1013 tryptophan 2 3-dioxygenase (vermilion)-like protein; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Tryptophan 2,3-dioxygenase
YP_004776896.1	PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: mtt:Ftrac_0660 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR:  uncharacterized protein
YP_004776897.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR002305; KEGG: mtt:Ftrac_0658 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; SPTR: Tryptophan--tRNA ligase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib
YP_004776898.1	KEGG: mtt:Ftrac_0767 hypothetical protein; SPTR:  uncharacterized protein
YP_004776899.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845; KEGG: chu:CHU_0998 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; SPTR: Phosphoglucomutase
YP_004776901.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: npu:Npun_BR144 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR:  uncharacterized protein
YP_004776902.1	PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: mtt:Ftrac_0514 amp-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: O-succinylbenzoic acid--CoA ligase
YP_004776903.1	PFAM: Enoyl-CoA hydratase/isomerase; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase); COGs: COG0447 Dihydroxynaphthoic acid synthase; InterPro IPR010198:IPR001753; KEGG: cao:Celal_4119 1,4-dihydroxy-2-naphthoate synthase; PFAM: Crotonase, core; SPTR: 1,4-Dihydroxy-2-naphthoate synthase; TIGRFAM: Naphthoate synthase
YP_004776904.1	PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; InterPro IPR001272; KEGG: rbi:RB2501_03670 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising
YP_004776905.1	KEGG: bfs:BF3837 hypothetical protein; SPTR:  uncharacterized protein
YP_004776906.1	PFAM: alpha/beta hydrolase fold; COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: fbc:FB2170_01482 lipase esterase; SPTR: Lipase,  esterase
YP_004776908.1	PFAM: VIT family; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: mtt:Ftrac_3350 hypothetical protein; PFAM: Protein of unknown function DUF125, transmembrane; SPTR: Integral membrane protein
YP_004776909.1	PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582:IPR002818; KEGG: cat:CA2559_11433 catalase HPII; PFAM: Catalase related subgroup; Catalase-related immune responsive; ThiJ/PfpI; SPTR: Catalase
YP_004776910.1	PFAM: Eukaryotic DNA topoisomerase I, catalytic core; COGs: COG3569 Topoisomerase IB; KEGG: cao:Celal_0443 DNA topoisomerase; SPTR: DNA topoisomerase
YP_004776911.1	PFAM: Protein of unknown function (DUF808); COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: cly:Celly_0859 hypothetical protein; PFAM: Protein of unknown function DUF808; SPTR:  uncharacterized protein
YP_004776912.1	PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: cao:Celal_1820 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: UPF0391 membrane protein ytjA
YP_004776913.1	PFAM: Protein of unknown function (DUF421); COGs: COG2323 membrane protein; InterPro IPR007353; KEGG: gfo:GFO_3637 hypothetical protein; PFAM: Protein of unknown function DUF421; SPTR: Membrane protein containing DUF421
YP_004776914.1	PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; InterPro IPR011971:IPR019052; KEGG: cao:Celal_1821 hypothetical protein; PFAM: Protein of unknown function DUF2383; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284
YP_004776915.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family
YP_004776916.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003661:IPR003594:IPR013656; KEGG: cao:Celal_3563 pas/pac sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS
YP_004776918.1	PFAM: Response regulator receiver domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789; KEGG: cly:Celly_2475 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver
YP_004776919.1	PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG3871 Uncharacterized stress protein (general stress protein 26); KEGG: pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; SPTR:  uncharacterized protein
YP_004776920.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_4321 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family
YP_004776921.1	PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: cly:Celly_2475 response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver
YP_004776922.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cly:Celly_2476 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Possible ARAC-type regulatory protein
YP_004776923.1	KEGG: cly:Celly_1593 entericidin EcnAB; SPTR: Entericidin EcnAB
YP_004776924.1	PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: cao:Celal_1820 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: UPF0391 membrane protein ytjA
YP_004776925.1	PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: cat:CA2559_10028 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase
YP_004776926.1	PFAM: FAD binding domain; InterPro IPR003953; KEGG: psl:Psta_3017 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR:  pyridine nucleotide-disulphide oxidoreductase
YP_004776927.1	PFAM: Prolyl oligopeptidase; KEGG: glycosyl hydrolase BNR repeat-containing protein; SPTR:  O-antigen related protein
YP_004776928.1	PFAM: Metalloenzyme superfamily; KEGG: ppn:Palpr_0233 sulfatase; SPTR:  uncharacterized protein
YP_004776929.1	KEGG: nwa:Nwat_2905 hypothetical protein; SPTR:  uncharacterized protein
YP_004776930.1	PFAM: Diacylglycerol kinase catalytic domain; COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: mtt:Ftrac_2154 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region; SPTR: Diacylglycerol kinase related protein
YP_004776932.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_0982 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD
YP_004776933.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: hydrophobe/amphiphile efflux-1 (HAE1) family transporter; PFAM: Acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1
YP_004776934.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: NodT family RND efflux system outer membrane lipoprotein; PFAM: Outer membrane efflux protein; SPTR: Similar to outer-membrane efflux protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT
YP_004776935.1	PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pap:PSPA7_0119 transposase DDE domain-containing protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family
YP_004776936.1	KEGG: dfe:Dfer_3219 hypothetical protein; SPTR:  uncharacterized protein
YP_004776937.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6611 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004776938.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: sli:Slin_1219 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR
YP_004776939.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_6284 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70
YP_004776941.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: osp:Odosp_2242 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR:  extracytoplasmic function alternative sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004776943.1	SPTR: TonB
YP_004776944.1	PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: wvi:Weevi_1697 glutamate synthase (NADPH); PFAM: Glutamate synthase, central-C; SPTR: Glutamate synthase (NADPH)
YP_004776945.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: sli:Slin_5717 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004776946.1	PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3145 Alkylated DNA repair protein; InterPro IPR005123; KEGG: fjo:Fjoh_1572 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase, 2OG-Fe(II) oxygenase
YP_004776947.1	PFAM: Protein of unknown function (DUF1200); InterPro IPR009589; KEGG: fbc:FB2170_04385 lipoprotein; PFAM: Protein of unknown function DUF1200; SPTR: Lipoprotein
YP_004776948.1	PFAM: Small Multidrug Resistance protein; COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: Small multidrug resistance protein; SPTR: Small multidrug resistance protein
YP_004776949.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterPro IPR000014:IPR003661:IPR003594; KEGG: hse:Hsero_2572 two component sensor histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: Two component sensor histidine kinase; TIGRFAM: PAS
YP_004776950.1	PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rle:RL1000 hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR:  hydrolase
YP_004776951.1	PFAM: Thi4 family; KEGG: dfe:Dfer_4710 xanthan lyase; SPTR:  lipoprotein
YP_004776952.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pbs:Plabr_4157 N-acetylgalactosamine-6-sulfatase; PFAM: Sulfatase; SPTR: N-acetylgalactosamine-6-sulfatase
YP_004776953.1	KEGG: shg:Sph21_1277 hypothetical protein; SPTR: Probable secreted protein- xanthan lyase related
YP_004776954.1	KEGG: fbc:FB2170_11111  xanthan lyase; SPTR: Probable xanthan lyase
YP_004776955.1	PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_3913 sulfatase; PFAM: Sulfatase; SPTR: Arylsulfatase A
YP_004776957.1	PFAM: SusD family; InterPro IPR012944; KEGG: shg:Sph21_1880 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR:  outer membrane protein
YP_004776958.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: lby:Lbys_0357 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR:  TonB-linked outer membrane receptor protein
YP_004776959.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_3803 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  uncharacterized protein
YP_004776960.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: phe:Phep_3791 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70
YP_004776961.1	PFAM: Cupin domain; InterPro IPR013096; KEGG: ote:Oter_3738 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin domain protein
YP_004776962.1	PFAM: Glycosyl transferase 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: dfe:Dfer_0186 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004776963.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003018:IPR003661:IPR003594:IPR 001789:IPR013655:IPR013656:IPR008207; KEGG: cpi:Cpin_5573 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; PAS fold-4; GAF; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; GAF; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS
YP_004776964.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: gfo:GFO_0843 two-component response transcriptional regulator; PFAM: LytTr DNA-binding region; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component system response regulator protein
YP_004776965.1	COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: chl:Chy400_1779 transferase hexapeptide repeat containing protein; SPTR: Transferase hexapeptide repeat containing protein
YP_004776966.1	PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sli:Slin_3857 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR:  uncharacterized protein
YP_004776967.1	PFAM: Chain length determinant protein; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: bth:BT_1164 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis; SPTR:  uncharacterized protein
YP_004776968.1	KEGG: sli:Slin_3860 O-antigen polymerase; SPTR: Membrane protein
YP_004776969.1	PFAM: Glycosyl transferase 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cpi:Cpin_3709 glycosyl transferase 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase 2
YP_004776970.1	PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pru:PRU_1436 group 1 family glycosyltransferase; PFAM: Glycosyl transferase, group 1; SPTR: Probable mannosyltransferase B
YP_004776971.1	PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dfe:Dfer_0177 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein
YP_004776972.1	COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: phe:Phep_1964 cell wall biogenesis glycosyltransferase; SPTR: Glycosyltransferase probably involved in cell wall biogenesis
YP_004776973.1	KEGG: cts:Ctha_0382 group 1 glycosyl transferase; SPTR: Glycosyl transferase group 1
YP_004776974.1	PFAM: Bacterial sugar transferase; Response regulator receiver domain; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR001789:IPR003362; KEGG: dfe:Dfer_0162 sugar transferase; PFAM: Bacterial sugar transferase; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Sugar transferase
YP_004776975.1	PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: dfe:Dfer_0161 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein
YP_004776976.1	PFAM: NAD dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: hhe:HH0647 nucleotide sugar dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase
YP_004776977.1	PFAM: NIPSNAP; InterPro IPR012577; KEGG: NIPSNAP family containing protein; PFAM: NIPSNAP; SPTR: Nipsnap superfamily protein
YP_004776978.1	PFAM: NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: gfo:GFO_1622 periplasmic substrate-binding protein; SPTR:  uncharacterized protein
YP_004776979.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411:IPR000771; KEGG: lby:Lbys_3010 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; SPTR: Fructose-bisphosphate aldolase, class II; TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II
YP_004776982.1	PFAM: Acetyl xylan esterase (AXE1); COGs: COG3458 Acetyl esterase (deacetylase); KEGG: rba:RB609 xylan esterase; SPTR:  uncharacterized protein
YP_004776983.1	PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sli:Slin_0115 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR:  Tat (Twin-arginine translocation) pathway signal sequence containing protein
YP_004776984.1	KEGG: dfe:Dfer_2740 acetyl xylan esterase; SPTR: Acetyl xylan esterase
YP_004776985.1	KEGG: dfe:Dfer_3262 hypothetical protein; SPTR:  uncharacterized protein
YP_004776986.1	KEGG: sli:Slin_0048 hypothetical protein; SPTR:  uncharacterized protein
YP_004776987.1	PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: amt:Amet_0555 altronate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; SPTR: Altronate oxidoreductase
YP_004776988.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452:IPR012307:IPR001998; KEGG: cpi:Cpin_1929 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type
YP_004776989.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: sli:Slin_4247 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR:  carbohydrate kinase
YP_004776990.1	PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR019900:IPR001734; KEGG: sodium solute transporter superfamily protein; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter; TIGRFAM: Sodium/solute symporter, subgroup
YP_004776991.1	KEGG: wvi:Weevi_1683 hypothetical protein; SPTR:  uncharacterized protein
YP_004776992.1	PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: psn:Pedsa_1973 protein of unknown function DUF2490; PFAM: Protein of unknown function DUF2490; SPTR: 3-dehydroquinate dehydratase
YP_004776993.1	KEGG: psn:Pedsa_1972 hypothetical protein; SPTR:  uncharacterized protein
YP_004776994.1	PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: cpi:Cpin_5236 microcystin LR degradation protein MlrC; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: MlrC protein
YP_004776995.1	PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: wvi:Weevi_0086 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Alkaline D-peptidase and alkaline D-peptidase fusion
YP_004776996.1	PFAM: Phosphotransferase enzyme family; ABC1 family; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: chu:CHU_0987 protein kinase; PFAM: ABC-1; SPTR: ABC1 family protein
YP_004776997.1	KEGG: chu:CHU_0986 hypothetical protein; SPTR:  uncharacterized protein
YP_004776998.1	PFAM: Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: ilo:IL0916 carboxyl-terminal protease; PFAM: Peptidase S41; SMART: Peptidase S41; SPTR:  carboxyl-protease
YP_004776999.1	PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2115 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein
YP_004777000.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_2116 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug
YP_004777001.1	PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: shg:Sph21_0804 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR:  anti-sigma factor
YP_004777002.1	PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR013249; KEGG: sli:Slin_3388 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70
YP_004777003.1	PFAM: Fatty acid desaturase; COGs: COG1398 Fatty-acid desaturase; InterPro IPR005804; KEGG: dfe:Dfer_0451 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase; manually curated
YP_004777004.1	PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: psn:Pedsa_3661 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional regulator
YP_004777005.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase, central domain; UDP-glucose/GDP-mannose dehydrogenase, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: shg:Sph21_2004 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase
YP_004777006.1	PFAM: Inositol monophosphatase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006240:IPR000760; KEGG: bvu:BVU_0420 CysQ, sulfite synthesis pathway protein; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial
YP_004777007.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR005225:IPR011779:IPR000795:IPR004161; KEGG: mtt:Ftrac_2437 sulfate adenylyltransferase subunit 1; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Sulfate adenylyltransferase, large subunit/adenylylsulfate kinase; TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein
YP_004777008.1	PFAM: Phosphoadenosine phosphosulfate reductase; TIGRFAM: sulfate adenylyltransferase, small subunit; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784:IPR002500; KEGG: caa:Caka_0839 sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: Sulfate adenylyltransferase, small subunit; TIGRFAM: Sulphate adenylyltransferase, small subunit
YP_004777009.1	PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); COGs: COG0529 Adenylylsulfate kinase and related kinase; HAMAP: Adenylyl-sulfate kinase; InterPro IPR002891; KEGG: pmx:PERMA_1989 adenylylsulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal; SPTR: Adenylyl-sulfate kinase; TIGRFAM: Adenylylsulphate kinase, C-terminal
YP_004777010.1	PFAM: TrkA-C domain; Citrate transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: tam:Theam_0664 TrkA-C domain protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR:  citrate transporter
YP_004777011.1	InterPro IPR004843; KEGG: msv:Mesil_3324 hypothetical protein; PFAM: Metallophosphoesterase; SPTR:  uncharacterized protein
YP_004777012.1	PFAM: Glycosyl hydrolase 20, catalytic domain; Glycosyl hydrolase 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: shg:Sph21_0656 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like; SPTR: Beta-N-acetylhexosaminidase
YP_004777013.1	PFAM: CAAX amino terminal protease; InterPro IPR003675; KEGG: abortive infection protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease
YP_004777014.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR019904:IPR003718; KEGG: chu:CHU_2252 osmotically inducible protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Osmotically inducible protein; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup
YP_004777015.1	PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; COGs: COG1808 membrane protein; InterPro IPR013031:IPR005240; KEGG: dak:DaAHT2_2330 hypothetical protein; PFAM: Protein of unknown function DUF389; SPTR:  uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00341
YP_004777016.1	IMG reference gene:2506464831_SP