-- dump date   	20140619_054000
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003150420.1	PFAM: Bacterial dnaA protein helix-turn-helix domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_003150421.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, central domain; DNA polymerase III beta subunit, N-terminal domain; TIGRFAM: DNA polymerase III, beta subunit
YP_003150422.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_003150424.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B subunit, carboxyl terminus; Endoplasmic reticulum protein ERp29, C-terminal domain; Toprim domain; TIGRFAM: DNA gyrase, B subunit
YP_003150425.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_003150426.1	PFAM: DnaJ domain
YP_003150427.1	PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Elongation factor G C-terminus; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_003150429.1	PFAM: ApbE family
YP_003150430.1	PFAM: Asparaginase; TIGRFAM: L-asparaginases, type II
YP_003150433.1	PFAM: SEC-C motif; metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003150434.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_003150435.1	PFAM: Formiminotransferase-cyclodeaminase
YP_003150436.1	unknown function
YP_003150437.1	PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_003150438.1	PFAM: Peptidase family C69; cell wall binding repeat
YP_003150441.1	PFAM: LytTr DNA-binding domain
YP_003150442.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003150443.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003150444.1	PFAM: UBA/TS-N domain
YP_003150445.1	PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003150446.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_003150447.1	PFAM: KH domain
YP_003150448.1	PFAM: PRC-barrel domain; TIGRFAM: 16S rRNA processing protein RimM
YP_003150449.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_003150450.1	PFAM: Peptidase S24-like; Peptidase S26; TIGRFAM: signal peptidase I, bacterial type
YP_003150451.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_003150452.1	PFAM: DALR anticodon binding domain; Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit
YP_003150453.1	PFAM: Domain of unknown function (DUF299)
YP_003150454.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_003150455.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003150457.1	PFAM: Cupin domain
YP_003150459.1	PFAM: HemN C-terminal region; Radical SAM superfamily
YP_003150461.1	PFAM: Family of unknown function (DUF438); Domain of unknown function (DUF1858); Hemerythrin HHE cation binding domain
YP_003150463.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003150464.1	PFAM: Molybdopterin oxidoreductase Fe4S4 domain; TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence; anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family
YP_003150465.1	PFAM: 4Fe-4S binding domain; TIGRFAM: DMSO reductase, iron-sulfur subunit
YP_003150466.1	PFAM: DMSO reductase anchor subunit (DmsC)
YP_003150467.1	PFAM: Cytoplasmic chaperone TorD
YP_003150468.1	PFAM: DMSO reductase anchor subunit (DmsC)
YP_003150470.1	PFAM: SirA-like protein
YP_003150472.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150473.1	PFAM: Radical SAM superfamily
YP_003150474.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003150476.1	PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR
YP_003150477.1	PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE
YP_003150479.1	PFAM: 4Fe-4S binding domain
YP_003150480.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_003150481.1	PFAM: GrpE
YP_003150482.1	PFAM: DnaJ domain; DnaJ C terminal region
YP_003150483.1	PFAM: MerR family regulatory protein
YP_003150484.1	PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_003150485.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003150487.1	PFAM: Cation transport protein
YP_003150489.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; GTP-binding conserved hypothetical protein
YP_003150490.1	PFAM: Amidohydrolase
YP_003150491.1	PFAM: Flavodoxin-like fold
YP_003150492.1	PFAM: UvrD/REP helicase
YP_003150495.1	PFAM: Domain of unknown function (DUF1949); Uncharacterized protein family UPF0029; TIGRFAM: conserved hypothetical protein TIGR00257
YP_003150496.1	PFAM: Gram positive anchor; Cna protein B-type domain; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003150497.1	PFAM: Cna protein B-type domain
YP_003150498.1	PFAM: Cna protein B-type domain; Gram positive anchor; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003150499.1	PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein
YP_003150500.1	PFAM: Iron-containing alcohol dehydrogenase
YP_003150501.1	PFAM: LrgB-like family; TIGRFAM: conserved hypothetical protein TIGR00659
YP_003150502.1	PFAM: LrgA family
YP_003150503.1	PFAM: MarR family
YP_003150505.1	PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family
YP_003150506.1	PFAM: 4Fe-4S binding domain
YP_003150507.1	PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_003150508.1	PFAM: 4Fe-4S binding domain
YP_003150509.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003150511.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003150512.1	interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide
YP_003150513.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003150514.1	PFAM: Nickel-dependent hydrogenase; Respiratory-chain NADH dehydrogenase, 30 Kd subunit
YP_003150515.1	PFAM: 4Fe-4S binding domain
YP_003150516.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_003150517.1	PFAM: Formate hydrogenlyase maturation protein HycH
YP_003150518.1	involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE
YP_003150519.1	PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter
YP_003150520.1	TIGRFAM: exonuclease SbcC
YP_003150521.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: exonuclease SbcD
YP_003150522.1	PFAM: Predicted permease; ABC transporter
YP_003150523.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_003150524.1	PFAM: Cyclic nucleotide-binding domain; Bacterial regulatory proteins, crp family
YP_003150525.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_003150526.1	PFAM: AhpC/TSA family; C-terminal domain of 1-Cys peroxiredoxin; TIGRFAM: peroxiredoxin
YP_003150527.1	PFAM: Ferric uptake regulator family
YP_003150529.1	PFAM: Domain of unknown function DUF81
YP_003150530.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150531.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_003150532.1	PFAM: Phosphoglucose isomerase
YP_003150533.1	PFAM: yrdC domain; HypF finger; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF
YP_003150534.1	PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF
YP_003150535.1	PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD
YP_003150536.1	PFAM: Bacterial membrane flanked domain
YP_003150537.1	PFAM: Bacterial membrane flanked domain
YP_003150538.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_003150539.1	PFAM: Transporter associated domain; CBS domain pair; Domain of unknown function DUF21
YP_003150540.1	PFAM: PspC domain
YP_003150541.1	PFAM: PspC domain
YP_003150542.1	PFAM: TrkA-C domain; TrkA-N domain
YP_003150543.1	PFAM: TrkA-N domain
YP_003150544.1	PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_003150545.1	PFAM: Metallo-beta-lactamase superfamily
YP_003150546.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150547.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003150548.1	PFAM: Chaperonin 10 Kd subunit
YP_003150549.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_003150550.1	PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU)
YP_003150551.1	PFAM: SpoU rRNA Methylase family
YP_003150552.1	PFAM: Cna protein B-type domain; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003150553.1	PFAM: Shikimate kinase
YP_003150554.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_003150555.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_003150556.1	PFAM: Ribosomal protein S13/S18
YP_003150557.1	PFAM: Ribosomal protein S11
YP_003150558.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_003150559.1	PFAM: Bacterial RNA polymerase, alpha chain C terminal domain; RNA polymerase Rpb3/RpoA insert domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_003150560.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_003150561.1	PFAM: Cobalt transport protein
YP_003150563.1	PFAM: MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003150564.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003150565.1	PFAM: Alanine racemase, N-terminal domain; Alanine racemase, C-terminal domain; TIGRFAM: alanine racemase
YP_003150566.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_003150567.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_003150568.1	PFAM: FAD dependent oxidoreductase; FAD binding domain
YP_003150569.1	PFAM: PAP2 superfamily
YP_003150570.1	PFAM: SNARE associated Golgi protein
YP_003150571.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunits gamma and tau
YP_003150572.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: conserved hypothetical protein TIGR00103
YP_003150573.1	PFAM: RecR protein; Toprim domain; TIGRFAM: recombination protein RecR
YP_003150574.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase
YP_003150575.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_003150576.1	PFAM: Amino acid permease; TIGRFAM: arginine/ornithine antiporter
YP_003150577.1	PFAM: Aminotransferase class I and II
YP_003150578.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003150579.1	PFAM: Predicted SPOUT methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00246
YP_003150580.1	PFAM: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: diaminopimelate decarboxylase
YP_003150581.1	PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain
YP_003150583.1	PFAM: Glucan-binding protein C
YP_003150584.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_003150585.1	PFAM: Ribosomal protein S9/S16
YP_003150586.1	PFAM: B3/4 domain
YP_003150587.1	PFAM: Glutamine synthetase, catalytic domain; TIGRFAM: prevent-host-death family protein
YP_003150588.1	PFAM: FAD binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003150589.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003150590.1	PFAM: Aminotransferase class IV
YP_003150591.1	PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD
YP_003150592.1	PFAM: NUDIX domain
YP_003150593.1	PFAM: Aminopeptidase I zinc metalloprotease (M18)
YP_003150594.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_003150595.1	PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003150596.1	PFAM: Aminotransferase class-V
YP_003150597.1	PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_003150598.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; tRNA synthetases class I (M); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_003150599.1	PFAM: FecCD transport family
YP_003150600.1	PFAM: ABC transporter
YP_003150601.1	PFAM: Periplasmic binding protein; TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003150602.1	PFAM: Prophage CP4-57 regulatory protein (AlpA); TIGRFAM: DNA binding domain, excisionase family
YP_003150603.1	PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_003150604.1	PFAM: DUF218 domain
YP_003150605.1	PFAM: Sugar (and other) transporter
YP_003150607.1	PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_003150608.1	PFAM: LamB/YcsF family
YP_003150609.1	PFAM: Protein of unknown function (DUF1445)
YP_003150610.1	PFAM: RimK-like ATP-grasp domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin carboxylase C-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
YP_003150611.1	PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_003150612.1	PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_003150613.1	PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370
YP_003150614.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_003150616.1	PFAM: NifU-like N terminal domain
YP_003150618.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003150619.1	PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3
YP_003150620.1	PFAM: 4Fe-4S binding domain
YP_003150622.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_003150623.1	PFAM: 4Fe-4S binding domain
YP_003150624.1	PFAM: Polysulphide reductase, NrfD
YP_003150625.1	PFAM: Methyltransferase domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_003150627.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase A
YP_003150628.1	PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_003150629.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_003150630.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_003150631.1	PFAM: ATPase family associated with various cellular activities (AAA); Peptidase family M41; FtsH Extracellular; TIGRFAM: ATP-dependent metalloprotease FtsH
YP_003150632.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); Pterin binding enzyme; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; dihydropteroate synthase
YP_003150633.1	PFAM: MatE; TIGRFAM:  efflux protein, MATE family
YP_003150634.1	PFAM: BioY family
YP_003150635.1	PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150636.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003150637.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: transcriptional activator, , Baf family
YP_003150638.1	PFAM: Formate--tetrahydrofolate ligase
YP_003150639.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_003150641.1	PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_003150642.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_003150645.1	PFAM: Peptidase family U32
YP_003150646.1	PFAM: tRNA synthetases class I (W and Y); S4 domain; TIGRFAM: tyrosyl-tRNA synthetase
YP_003150649.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isocitrate dehydrogenase, NADP-dependent, prokaryotic type
YP_003150650.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_003150652.1	PFAM: Ribosomal protein L10
YP_003150653.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_003150654.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein
YP_003150655.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_003150657.1	PFAM: PAP2 superfamily
YP_003150658.1	PFAM: Polysaccharide biosynthesis protein
YP_003150659.1	PFAM: TatD related DNase
YP_003150660.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_003150662.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_003150663.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 4Fe-4S binding domain; Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit
YP_003150664.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_003150665.1	PFAM: AMP-binding enzyme
YP_003150668.1	PFAM:  cell wall binding repeat; N-acetylmuramoyl-L-alanine amidase
YP_003150669.1	PFAM: Bacteriophage holin; TIGRFAM: holin, phage phi LC3 family
YP_003150675.1	PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region
YP_003150678.1	PFAM: Bacterial Ig-like domain (group 2)
YP_003150685.1	PFAM: VRR-NUC domain
YP_003150689.1	TIGRFAM: phage portal protein, , A118 family
YP_003150690.1	PFAM: Phage terminase large subunit; Protein of unknown function (DUF1545); TIGRFAM: phage terminase, large subunit, PBSX family
YP_003150692.1	PFAM: ParB-like nuclease domain
YP_003150704.1	PFAM: OB-fold nucleic acid binding domain; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_003150705.1	PFAM: RecT family; TIGRFAM: phage recombination protein Bet
YP_003150707.1	PFAM: Protein of unknown function (DUF1351)
YP_003150712.1	PFAM: Peptidase S24-like; Helix-turn-helix
YP_003150715.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150717.1	PFAM: Phage integrase family
YP_003150718.1	PFAM: Cyclic nucleotide-binding domain
YP_003150721.1	PFAM: N-6 DNA Methylase; TIGRFAM: type I restriction system adenine methylase (hsdM)
YP_003150723.1	PFAM: Fic/DOC family
YP_003150725.1	PFAM: Type III restriction enzyme, res subunit; Type I restriction enzyme R protein N terminus (HSDR_N); TIGRFAM: type I site-specific deoxyribonuclease, HsdR family
YP_003150726.1	PFAM: Phage integrase family
YP_003150731.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150732.1	PFAM: ABC transporter
YP_003150733.1	PFAM: CoA enzyme activase uncharacterised domain (DUF2229); BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase
YP_003150734.1	PFAM: ABC transporter
YP_003150735.1	PFAM: Predicted permease; TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats
YP_003150736.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_003150737.1	PFAM: Integral membrane protein DUF6
YP_003150739.1	PFAM: Protein kinase domain; PASTA domain
YP_003150740.1	PFAM: Cell cycle protein; Penicillin binding protein transpeptidase domain
YP_003150741.1	PFAM: Protein phosphatase 2C
YP_003150742.1	PFAM: FHA domain
YP_003150743.1	PFAM: FHA domain
YP_003150744.1	PFAM: Predicted permease
YP_003150745.1	PFAM: ABC transporter
YP_003150746.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150747.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003150748.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_003150750.1	PFAM: Protein kinase domain
YP_003150751.1	PFAM: Phosphomethylpyrimidine kinase
YP_003150753.1	PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_003150756.1	PFAM: Aminotransferase class I and II
YP_003150757.1	PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003150760.1	PFAM: SNARE associated Golgi protein
YP_003150761.1	PFAM: TM2 domain
YP_003150762.1	PFAM: DeoC/LacD family aldolase
YP_003150763.1	PFAM: Permease family
YP_003150766.1	PFAM: VTC domain
YP_003150767.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003150768.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003150769.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003150770.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: dipeptidase
YP_003150771.1	PFAM: Ykud domain
YP_003150772.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_003150773.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_003150774.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150775.1	TIGRFAM: conserved repeat domain
YP_003150776.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_003150777.1	PFAM: Domain of unknown function DUF
YP_003150778.1	PFAM: MatE; TIGRFAM:  efflux protein, MATE family
YP_003150779.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_003150780.1	PFAM: AhpC/TSA family
YP_003150781.1	TIGRFAM: prevent-host-death family protein
YP_003150782.1	PFAM: Universal stress protein family
YP_003150784.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family
YP_003150785.1	PFAM: RNA 2'-O ribose methyltransferase substrate binding; SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, , group 3
YP_003150786.1	PFAM: Protein of unknown function (DUF901)
YP_003150787.1	PFAM: RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 7; RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; DNA-directed RNA polymerase, beta subunit
YP_003150788.1	PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; Bacterial RNA polymerase, alpha chain C terminal domain; RNA polymerase Rpb1, domain 2; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_003150789.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; TIGRFAM: phosphoglucosamine mutase
YP_003150790.1	PFAM: Collagen binding domain; Cna protein B-type domain
YP_003150791.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_003150792.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease
YP_003150793.1	PFAM: ABC transporter
YP_003150794.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_003150795.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_003150796.1	PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033
YP_003150797.1	PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL
YP_003150798.1	PFAM: Ppx/GppA phosphatase family
YP_003150799.1	PFAM: Polyprenyl synthetase
YP_003150800.1	PFAM:  peptidoglycan binding domain
YP_003150801.1	PFAM: Bacterial transferase hexapeptide (three repeats); Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_003150802.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_003150803.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_003150805.1	PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_003150806.1	PFAM: Region found in RelA / SpoT proteins; HD domain; ACT domain; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_003150807.1	PFAM: Metallo-beta-lactamase superfamily
YP_003150808.1	PFAM: Phosphate transporter family
YP_003150809.1	PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153
YP_003150810.1	PFAM: UPF0126 domain
YP_003150811.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class
YP_003150812.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150813.1	PFAM: ABC transporter; TOBE domain
YP_003150814.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003150815.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_003150816.1	PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150817.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003150819.1	TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003150820.1	PFAM: ABC transporter
YP_003150822.1	PFAM: Polyphosphate kinase
YP_003150823.1	PFAM: Polyphosphate kinase 2
YP_003150824.1	PFAM: Sortase family; TIGRFAM: sortase, SrtB family
YP_003150825.1	PFAM: Glutamine amidotransferases class-II; Phosphoribosyl transferase domain; TIGRFAM: amidophosphoribosyltransferase
YP_003150826.1	PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_003150827.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_003150829.1	PFAM: MGS-like domain; AICARFT/IMPCHase bienzyme; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_003150830.1	PFAM: DnaJ domain
YP_003150831.1	TIGRFAM: conserved hypothetical protein
YP_003150834.1	PFAM: ABC 3 transport family
YP_003150835.1	PFAM: ABC transporter
YP_003150836.1	PFAM: Periplasmic solute binding protein family
YP_003150838.1	PFAM: Ferric uptake regulator family
YP_003150839.1	PFAM: TipAS antibiotic-recognition domain; MerR, DNA binding; MerR family regulatory protein
YP_003150840.1	PFAM: alpha/beta hydrolase fold
YP_003150841.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150842.1	PFAM: Aconitase family (aconitate hydratase); TIGRFAM: homoaconitate hydratase; 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase, large subunit
YP_003150843.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_003150844.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_003150845.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase
YP_003150846.1	PFAM: Major Facilitator Superfamily
YP_003150847.1	PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_003150848.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_003150849.1	PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_003150850.1	PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; TIGRFAM: threonyl-tRNA synthetase
YP_003150851.1	PFAM: Peptide methionine sulfoxide reductase; Cytochrome C biogenesis protein transmembrane region; SelR domain; Redoxin; TIGRFAM: methionine-R-sulfoxide reductase; methionine-S-sulfoxide reductase
YP_003150852.1	PFAM: Acetyltransferase (GNAT) family
YP_003150853.1	PFAM: Methyltransferase domain
YP_003150854.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150855.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150856.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003150857.1	PFAM: ABC transporter
YP_003150858.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_003150859.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003150860.1	PFAM: Citrate transporter
YP_003150862.1	PFAM: Insulinase (Peptidase family M16); Peptidase M16C associated; Peptidase M16 inactive domain
YP_003150863.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_003150864.1	PFAM: Methyltransferase domain
YP_003150869.1	PFAM: ABC transporter
YP_003150872.1	PFAM: ParA/MinD ATPase like
YP_003150873.1	PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain; translation elongation factor EF-G
YP_003150874.1	PFAM: Glutamine amidotransferases class-II; SIS domain; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_003150875.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_003150876.1	PFAM: Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related
YP_003150878.1	PFAM: BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase adenylation domain; Helix-hairpin-helix motif; NAD-dependent DNA ligase C4 zinc finger domain; NAD-dependent DNA ligase OB-fold domain; TIGRFAM: DNA ligase, NAD-dependent
YP_003150879.1	PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein
YP_003150880.1	PFAM: Polysaccharide deacetylase
YP_003150881.1	PFAM: Uncharacterized ACR (DUF711)
YP_003150882.1	PFAM: Sodium:dicarboxylate symporter family
YP_003150883.1	PFAM: Domain of unknown function DUF81
YP_003150884.1	PFAM: Transcriptional regulator PadR-like family
YP_003150886.1	PFAM: Domain of unknown function (DUF364)
YP_003150887.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150888.1	PFAM: CoA enzyme activase uncharacterised domain (DUF2229); BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase
YP_003150889.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096
YP_003150890.1	PFAM: Protein of unknown function DUF45
YP_003150891.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003150893.1	PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase
YP_003150894.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_003150895.1	PFAM: NADPH-dependent FMN reductase
YP_003150896.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_003150897.1	PFAM: Protein of unknown function (DUF1021)
YP_003150898.1	PFAM: SpoU rRNA Methylase family
YP_003150902.1	PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF
YP_003150903.1	PFAM: ABC transporter
YP_003150904.1	PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB
YP_003150905.1	PFAM: Cytochrome C assembly protein
YP_003150907.1	PFAM: Nucleotidyl transferase
YP_003150910.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_003150912.1	PFAM: Domain of unknown function DUF20
YP_003150913.1	PFAM: tRNA synthetases class II (A); DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; TIGRFAM: alanyl-tRNA synthetase
YP_003150914.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250
YP_003150915.1	PFAM: Aminodeoxychorismate lyase; TIGRFAM: conserved hypothetical protein TIGR00247
YP_003150916.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD-superfamily hydrolase, subfamily IIIA
YP_003150918.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_003150919.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_003150920.1	PFAM: Creatinase/Prolidase N-terminal domain; metallopeptidase family M24
YP_003150921.1	PFAM: Elongation factor P (EF-P) OB domain; Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; TIGRFAM: translation elongation factor P
YP_003150922.1	PFAM:  cell wall binding repeat
YP_003150923.1	PFAM: ApbE family
YP_003150924.1	PFAM: Sodium:dicarboxylate symporter family
YP_003150925.1	PFAM: Conserved carboxylase domain; HMGL-like; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_003150926.1	PFAM: Biotin carboxylase C-terminal domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase
YP_003150927.1	PFAM: Protein of unknown function (DUF322)
YP_003150928.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_003150929.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_003150930.1	PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_003150931.1	PFAM: Citrate transporter
YP_003150933.1	PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_003150934.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_003150935.1	PFAM: Type III restriction enzyme, res subunit; Helicase conserved C-terminal domain; UvrB/uvrC motif; TIGRFAM: excinuclease ABC, B subunit
YP_003150936.1	PFAM: B12 binding domain; Radical SAM superfamily
YP_003150937.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_003150938.1	PFAM: Protein of unknown function (DUF454)
YP_003150939.1	PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003150940.1	PFAM: 4Fe-4S binding domain
YP_003150941.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_003150942.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_003150943.1	PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG
YP_003150944.1	PFAM: Protein of unknown function DUF88
YP_003150947.1	PFAM: SEC-C motif; SecA Wing and Scaffold domain; SecA DEAD-like domain; TIGRFAM: preprotein translocase, SecA subunit
YP_003150948.1	PFAM: RF-1 domain; PCRF domain; TIGRFAM: peptide chain release factor 2
YP_003150949.1	PFAM: Transketolase, thiamine diphosphate binding domain
YP_003150950.1	PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain
YP_003150951.1	PFAM: ABC transporter; TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE
YP_003150952.1	PFAM: Predicted permease
YP_003150953.1	PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc)
YP_003150954.1	PFAM: Peptidase family M20/M25/M40
YP_003150955.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_003150957.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_003150958.1	PFAM: Protein of unknown function (DUF322)
YP_003150959.1	PFAM: DAK2 domain
YP_003150960.1	PFAM: DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase RecG
YP_003150961.1	PFAM: DNA methylase; TIGRFAM:  methyltransferase
YP_003150962.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_003150963.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150965.1	PFAM: Uncharacterized ACR, COG1399
YP_003150966.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_003150967.1	PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_003150968.1	PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial
YP_003150969.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type
YP_003150970.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_003150971.1	PFAM: Signal peptide binding domain; SRP54-type protein, helical bundle domain; SRP54-type protein, GTPase domain; TIGRFAM: signal recognition particle protein
YP_003150972.1	PFAM: Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, C-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_003150973.1	PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_003150974.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_003150977.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003150979.1	PFAM: Phosphotransferase enzyme family
YP_003150980.1	PFAM: Ethanolamine utilisation protein, EutH
YP_003150981.1	PFAM: Polysaccharide biosynthesis protein
YP_003150982.1	PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase
YP_003150984.1	PFAM: LICD Protein Family
YP_003150985.1	PFAM: Glycosyl transferase family 2
YP_003150986.1	PFAM: LICD Protein Family
YP_003150989.1	PFAM: Aminotransferase class-V
YP_003150990.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Cytidylyltransferase; TIGRFAM: glycerol-3-phosphate cytidylyltransferase; cytidyltransferase-related domain
YP_003150991.1	PFAM: Glycosyl transferase family 2
YP_003150992.1	PFAM: Glycosyl transferases group 1
YP_003150993.1	PFAM: LICD Protein Family
YP_003150994.1	PFAM:  cell wall binding repeat; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003150995.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_003150996.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_003150997.1	PFAM: Domain of unknown function (DUF1967); GTPase of unknown function; GTP1/OBG; TIGRFAM: small GTP-binding protein domain; GTP-binding protein Obg/CgtA; GTP-binding conserved hypothetical protein
YP_003150998.1	PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase
YP_003150999.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; conserved hypothetical protein TIGR00488
YP_003151000.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein
YP_003151001.1	PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_003151002.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_003151003.1	PFAM: Tetratricopeptide repeat; Tetratricopeptide repeat
YP_003151004.1	PFAM: Nucleoside diphosphate kinase
YP_003151005.1	PFAM: Cell division protein FtsA; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_003151006.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_003151007.1	TIGRFAM: rod shape-determining protein MreD
YP_003151008.1	PFAM: Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain; TIGRFAM: penicillin-binding protein 2
YP_003151009.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_003151011.1	PFAM: B12 binding domain; Radical SAM superfamily
YP_003151012.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2344)
YP_003151013.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; FAD binding domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_003151016.1	PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_003151017.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003151018.1	PFAM: Cysteine-rich domain
YP_003151019.1	PFAM: Integral membrane protein TerC family
YP_003151020.1	PFAM: Diacylglycerol kinase catalytic domain
YP_003151021.1	PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D
YP_003151022.1	PFAM:  neutral zinc metallopeptidase
YP_003151023.1	PFAM: OB-fold nucleic acid binding domain; Exonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_003151024.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_003151025.1	PFAM: HIT domain
YP_003151026.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_003151027.1	PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_003151028.1	PFAM: Glycosyl transferase family 2
YP_003151029.1	PFAM: impB/mucB/samB family
YP_003151030.1	PFAM: Aminotransferase class I and II
YP_003151031.1	PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: degV family protein
YP_003151032.1	PFAM: Anticodon-binding domain; tRNA synthetases class I (I, L, M and V); Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase
YP_003151033.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_003151034.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_003151035.1	PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_003151036.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_003151040.1	PFAM:  cell wall binding repeat; TIGRFAM: M6 family metalloprotease domain
YP_003151041.1	PFAM: ThiF family
YP_003151042.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_003151043.1	TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD
YP_003151044.1	PFAM: RNase H
YP_003151045.1	PFAM: Sodium:neurotransmitter symporter family
YP_003151046.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003151047.1	PFAM: B3/4 domain
YP_003151048.1	PFAM: SPFH domain / Band 7 family
YP_003151049.1	PFAM: Nitroreductase family
YP_003151050.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_003151051.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_003151052.1	catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
YP_003151053.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_003151054.1	PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form
YP_003151055.1	PFAM: Sodium:neurotransmitter symporter family
YP_003151056.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003151057.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase
YP_003151058.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_003151059.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_003151060.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151061.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003151062.1	PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component; Oligopeptide/dipeptide transporter, C-terminal region
YP_003151063.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_003151064.1	PFAM: Dihydrodipicolinate synthetase family
YP_003151065.1	PFAM: ROK family
YP_003151066.1	PFAM:  N-acetylmannosamine-6-phosphate epimerase
YP_003151067.1	PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_003151068.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase
YP_003151069.1	PFAM: ABC transporter
YP_003151070.1	PFAM: Peptidase family M50
YP_003151071.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_003151072.1	PFAM: ScpA/B protein
YP_003151073.1	PFAM:  transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_003151074.1	PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family
YP_003151075.1	PFAM: ACT domain; Prephenate dehydrogenase
YP_003151076.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_003151077.1	PFAM: Shikimate kinase; Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_003151078.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003151079.1	PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_003151080.1	PFAM: Protein of unknown function (DUF512); Radical SAM superfamily; TIGRFAM:  FeS-containing Cyanobacterial-specific oxidoreductase
YP_003151081.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; GTP-binding protein Era
YP_003151082.1	PFAM: Domain of unknown function DUF; TIGRFAM: conserved hypothetical integral membrane protein TIGR00023
YP_003151083.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
YP_003151084.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_003151085.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_003151086.1	PFAM: Aminotransferase class-V
YP_003151087.1	PFAM: NIF3 (NGG1p interacting factor 3)
YP_003151088.1	PFAM:  zinc ribbon domain
YP_003151089.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase
YP_003151090.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_003151091.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_003151092.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_003151093.1	PFAM: Ribonuclease HII
YP_003151094.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252
YP_003151095.1	PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_003151096.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_003151097.1	PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase
YP_003151098.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_003151099.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_003151100.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_003151101.1	PFAM: UvrB/uvrC motif; GIY-YIG catalytic domain; UvrC Helix-hairpin-helix N-terminal; TIGRFAM: excinuclease ABC, C subunit
YP_003151102.1	PFAM: P-loop ATPase family
YP_003151103.1	PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_003151104.1	PFAM: Sporulation Regulator WhiA C terminal domain; Sporulation Regulator WhiA N terminal; TIGRFAM: conserved hypothetical protein
YP_003151105.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_003151106.1	PFAM: Phosphoglycerate kinase
YP_003151107.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_003151108.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_003151109.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_003151110.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003151111.1	PFAM: NADH dehydrogenase
YP_003151112.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit
YP_003151114.1	PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase
YP_003151115.1	PFAM: 4Fe-4S binding domain
YP_003151116.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_003151117.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_003151118.1	PFAM: FHA domain
YP_003151119.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain
YP_003151120.1	PFAM: Peptidase family S51
YP_003151121.1	PFAM: UbiA prenyltransferase family
YP_003151123.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_003151124.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_003151125.1	PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_003151126.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_003151127.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_003151129.1	PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_003151130.1	PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_003151131.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TRAM domain; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB
YP_003151132.1	PFAM: Stage V sporulation protein S (SpoVS)
YP_003151133.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003151134.1	PFAM: KH domain; HD domain; TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_003151135.1	PFAM: RecX family
YP_003151136.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_003151137.1	PFAM: Competence-damaged protein; CDP-alcohol phosphatidyltransferase; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; competence/damage-inducible protein CinA C-terminal domain
YP_003151138.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TRAM domain; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG, TIGR01125
YP_003151139.1	PFAM: Protein of unknown function (DUF520)
YP_003151141.1	PFAM: FtsK/SpoIIIE family; Ftsk gamma domain
YP_003151142.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein
YP_003151143.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_003151145.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_003151146.1	PFAM: Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 1; KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 2
YP_003151147.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_003151148.1	PFAM: Recombination protein O; TIGRFAM: DNA repair protein RecO
YP_003151149.1	PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; GTP-binding protein Era; small GTP-binding protein domain
YP_003151150.1	PFAM: Prokaryotic diacylglycerol kinase
YP_003151151.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043
YP_003151152.1	PFAM: Uncharacterized protein family UPF0004; Radical SAM superfamily; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme
YP_003151153.1	PFAM: RNA methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00046
YP_003151154.1	PFAM: DnaJ domain; DnaJ central domain (4 repeats); DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ
YP_003151155.1	PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA
YP_003151156.1	PFAM: HemN C-terminal region; Radical SAM superfamily; TIGRFAM:  oxygen-independent coproporphyrinogen III oxidase
YP_003151157.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM:  TIM-barrel protein, nifR3 family
YP_003151159.1	PFAM: GTP-binding protein LepA C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_003151160.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_003151161.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; Tat (twin-arginine translocation) pathway signal sequence
YP_003151162.1	PFAM: Competence protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein
YP_003151163.1	PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein
YP_003151164.1	PFAM: tRNA methyl transferase; THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_003151165.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_003151166.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_003151168.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1
YP_003151169.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_003151170.1	PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_003151171.1	PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_003151172.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_003151173.1	PFAM: Phosphoribosyl transferase domain
YP_003151174.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_003151175.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003151176.1	PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain
YP_003151177.1	PFAM: 4Fe-4S binding domain
YP_003151179.1	PFAM: Cupin domain
YP_003151180.1	PFAM: AMP-binding enzyme
YP_003151181.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_003151182.1	PFAM: NusB family; NOL1/NOP2/sun family
YP_003151183.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_003151184.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_003151185.1	PFAM: Toprim domain; DnaB-helicase binding domain of primase; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; TIGRFAM: DNA primase, catalytic core
YP_003151186.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_003151187.1	PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_003151188.1	PFAM: DHHA1 domain; DHH family
YP_003151189.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_003151190.1	PFAM: Translation initiation factor IF-2, N-terminal region; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_003151191.1	PFAM: Protein of unknown function (DUF448)
YP_003151192.1	PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA
YP_003151193.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_003151194.1	PFAM: DNA/RNA non-specific endonuclease
YP_003151195.1	PFAM: Isochorismatase family
YP_003151198.1	PFAM: Resolvase, N terminal domain; Recombinase
YP_003151200.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003151201.1	PFAM: Ferritin-like domain
YP_003151202.1	PFAM: 4Fe-4S binding domain
YP_003151204.1	PFAM: ABC transporter
YP_003151205.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003151206.1	PFAM: Mechanosensitive ion channel
YP_003151207.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I
YP_003151208.1	PFAM: Transcriptional regulatory protein, C terminal
YP_003151209.1	PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I
YP_003151210.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_003151211.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003151212.1	PFAM: ABC transporter
YP_003151213.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003151214.1	PFAM: Glycosyl hydrolases family 25; cell wall binding repeat
YP_003151215.1	PFAM: Integral membrane protein DUF6
YP_003151216.1	PFAM: Phosphotransferase enzyme family
YP_003151217.1	PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase
YP_003151218.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003151219.1	PFAM: Bacterial sugar transferase
YP_003151220.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_003151221.1	PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain
YP_003151222.1	PFAM: 4Fe-4S binding domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
YP_003151223.1	PFAM: LysR substrate binding domain
YP_003151224.1	PFAM: AMP-binding enzyme
YP_003151225.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family
YP_003151226.1	PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: primosomal protein N'
YP_003151227.1	PFAM: S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_003151230.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_003151231.1	PFAM: 4Fe-4S binding domain
YP_003151232.1	PFAM: CarD-like/TRCF domain; TRCF domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: transcription-repair coupling factor (mfd)
YP_003151234.1	PFAM: Helix-hairpin-helix motif; Iron-sulfur binding domain of endonuclease III; TIGRFAM: endonuclease III
YP_003151235.1	PFAM: Glutathione peroxidase
YP_003151236.1	PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase maturation protease
YP_003151237.1	PFAM: Prokaryotic cytochrome b561; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit
YP_003151238.1	PFAM: Nickel-dependent hydrogenase
YP_003151239.1	PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA)
YP_003151240.1	PFAM: Rubrerythrin
YP_003151241.1	PFAM: ACT domain; Prephenate dehydratase
YP_003151242.1	PFAM: Helix-hairpin-helix motif
YP_003151243.1	PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003151245.1	TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; HAD-superfamily subfamily IB hydrolase, TIGR01490
YP_003151247.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003151248.1	PFAM: FAD binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151249.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151251.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_003151252.1	acts in anaerobic beta-oxidation of fatty acids; possible ligase/synthase involved in anaerobic growth on fatty acids
YP_003151254.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_003151255.1	PFAM: CoA-transferase family III
YP_003151256.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_003151257.1	PFAM: Major Facilitator Superfamily
YP_003151258.1	PFAM: Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, C-terminal domain
YP_003151260.1	PFAM: FAD dependent oxidoreductase
YP_003151261.1	PFAM: Electron transfer flavoprotein FAD-binding domain; Electron transfer flavoprotein domain
YP_003151262.1	PFAM: Electron transfer flavoprotein domain
YP_003151263.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_003151265.1	PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_003151266.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: ketol-acid reductoisomerase
YP_003151267.1	PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit
YP_003151268.1	PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_003151269.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_003151270.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_003151271.1	PFAM: Phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family
YP_003151272.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family  methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_003151273.1	PFAM: RF-1 domain; PCRF domain; TIGRFAM: peptide chain release factor 1
YP_003151274.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_003151275.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003151276.1	PFAM: Patatin-like phospholipase
YP_003151277.1	PFAM: Peptidase C26
YP_003151279.1	PFAM: Protein of unknown function (DUF1304)
YP_003151281.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; valyl-tRNA synthetase
YP_003151282.1	PFAM: ClpX C4-type zinc finger; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_003151283.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_003151284.1	PFAM: SAP domain; FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_003151285.1	PFAM: AMP-binding enzyme
YP_003151286.1	PFAM: Helix-turn-helix; Cupin domain
YP_003151288.1	PFAM: Hsp20/alpha crystallin family
YP_003151289.1	PFAM: Acetyltransferase (GNAT) family
YP_003151290.1	PFAM: Sigma-70 factor, region 1.2; Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_003151293.1	PFAM: Radical SAM superfamily
YP_003151294.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_003151295.1	PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: degV family protein
YP_003151296.1	PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: degV family protein
YP_003151297.1	PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: degV family protein
YP_003151298.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM:  nicotinate phosphoribosyltransferase
YP_003151299.1	PFAM: PSP1 C-terminal conserved region
YP_003151300.1	TIGRFAM: DNA polymerase III, delta' subunit
YP_003151301.1	PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_003151302.1	PFAM: DNA topoisomerase; Topoisomerase DNA binding C4 zinc finger; Toprim domain; TIGRFAM: DNA topoisomerase I, archaeal
YP_003151304.1	PFAM: Protein of unknown function (DUF1385)
YP_003151305.1	PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_003151306.1	PFAM: Methyltransferase domain
YP_003151307.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_003151308.1	PFAM: tRNA synthetases class I (M)
YP_003151309.1	PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_003151310.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho
YP_003151311.1	PFAM: Transaldolase; TIGRFAM: transaldolase, , TalC family
YP_003151312.1	PFAM: Amidohydrolase family
YP_003151313.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_003151314.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_003151315.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
YP_003151316.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: probable hydroxymethylpyrimidine transporter CytX
YP_003151317.1	PFAM: Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase
YP_003151318.1	PFAM: Glucan-binding protein C
YP_003151319.1	PFAM: DivIVA protein
YP_003151320.1	PFAM: YGGT family
YP_003151321.1	PFAM: Protein of unknown function (DUF552)
YP_003151322.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_003151323.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726
YP_003151324.1	PFAM: Tubulin/FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain; TIGRFAM: cell division protein FtsZ
YP_003151325.1	PFAM: POTRA domain, FtsQ-type
YP_003151326.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; Mur ligase family, catalytic domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_003151327.1	PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_003151328.1	PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW
YP_003151329.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_003151330.1	PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_003151331.1	PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_003151332.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases
YP_003151333.1	PFAM: Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain
YP_003151334.1	TIGRFAM: cell division protein FtsL
YP_003151335.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_003151336.1	PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_003151337.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_003151338.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_003151339.1	PFAM: ATP-NAD kinase
YP_003151340.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_003151341.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_003151342.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_003151343.1	PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, RNA binding domain; TIGRFAM: 50S ribosomal protein L11
YP_003151344.1	PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_003151345.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_003151346.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_003151347.1	PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_003151348.1	PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter
YP_003151350.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain; 4Fe-4S binding domain; Domain of unknown function; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_003151351.1	PFAM: Adenylate kinase; TIGRFAM: adenylate kinases
YP_003151352.1	PFAM: Cupin domain
YP_003151353.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003151354.1	PFAM: Ribosomal protein L15; Ribosomal protein L15 amino terminal region; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_003151355.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_003151356.1	PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_003151357.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_003151358.1	PFAM: Ribosomal protein L6
YP_003151359.1	PFAM: Ribosomal protein S8
YP_003151360.1	PFAM: Ribosomal protein S14p/S29e
YP_003151361.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_003151362.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_003151363.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_003151364.1	PFAM: Ribosomal protein S17
YP_003151365.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_003151366.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_003151367.1	PFAM: Ribosomal protein S3, C-terminal domain; KH domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_003151368.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_003151369.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_003151370.1	PFAM: Ribosomal Proteins L2, C-terminal domain; Ribosomal Proteins L2, RNA binding domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_003151371.1	PFAM: Glycosyltransferase family 28 C-terminal domain
YP_003151372.1	PFAM: Glucose inhibited division protein A; FAD binding domain
YP_003151373.1	PFAM: Ribosomal protein L23
YP_003151374.1	PFAM: Ribosomal protein L4/L1 family
YP_003151375.1	PFAM: Ribosomal protein L3
YP_003151376.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_003151377.1	PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_003151378.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_003151379.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_003151380.1	PFAM: Serine dehydratase alpha chain; ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; L-serine dehydratase, iron-sulfur-dependent, beta subunit; L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_003151381.1	PFAM: Protein of unknown function (DUF1113)
YP_003151383.1	PFAM: Universal stress protein family
YP_003151384.1	PFAM: DHHA2 domain; DHH family
YP_003151385.1	PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA
YP_003151386.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_003151387.1	PFAM: Chorismate mutase type II
YP_003151388.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151389.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; FMN-binding domain; FAD binding domain; TIGRFAM: flavocytochrome c
YP_003151390.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_003151391.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_003151392.1	PFAM: ABC transporter
YP_003151393.1	PFAM: ABC-2 type transporter
YP_003151394.1	PFAM: Bacterial regulatory proteins, tetR family; Tetracyclin repressor, C-terminal all-alpha domain
YP_003151395.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003151396.1	PFAM: Protein of unknown function (DUF421)
YP_003151399.1	PFAM: Cupin domain
YP_003151400.1	PFAM: Glutamine amidotransferase class-I; NAD synthase; GMP synthase C terminal domain; TIGRFAM: GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
YP_003151401.1	PFAM: Protein of unknown function (DUF1648)
YP_003151403.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003151404.1	PFAM: 4Fe-4S binding domain
YP_003151405.1	PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein ( transcriptional regulator)
YP_003151406.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003151408.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC
YP_003151409.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_003151410.1	PFAM: Aldo/keto reductase family
YP_003151411.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003151412.1	PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003151413.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate cytidylyltransferase
YP_003151414.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: CDP-glucose 4,6-dehydratase
YP_003151415.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_003151416.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003151417.1	PFAM: Glycosyl transferase family 2
YP_003151418.1	possible carboligase or decarboxylase; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain
YP_003151420.1	PFAM: HhH-GPD superfamily base excision DNA repair protein
YP_003151421.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_003151422.1	PFAM: MoaE protein
YP_003151423.1	PFAM: Peptidase family M20/M25/M40
YP_003151424.1	PFAM: Major Facilitator Superfamily
YP_003151425.1	PFAM: ABC transporter
YP_003151426.1	PFAM: Periplasmic binding protein
YP_003151427.1	PFAM: His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003151428.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003151431.1	PFAM: ABC transporter
YP_003151432.1	PFAM: Predicted permease
YP_003151433.1	PFAM: Glycosyltransferase family 28 N-terminal domain
YP_003151439.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003151440.1	PFAM: Polysaccharide deacetylase
YP_003151442.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003151443.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase
YP_003151444.1	PFAM: ABC transporter
YP_003151446.1	PFAM: ABC-2 type transporter
YP_003151447.1	PFAM: short chain dehydrogenase
YP_003151448.1	PFAM: Sodium/hydrogen exchanger family; TIGRFAM: Na+/H+ antiporter, bacterial form
YP_003151449.1	PFAM: Fic/DOC family
YP_003151450.1	PFAM: MucBP domain; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003151452.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_003151453.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_003151454.1	PFAM: SNO glutamine amidotransferase family
YP_003151455.1	PFAM: Peptidase family U32
YP_003151456.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-amino-5-hydroxybenoic acid synthesis related protein; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_003151457.1	PFAM: RIO1 family
YP_003151459.1	PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_003151460.1	PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_003151461.1	PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP
YP_003151462.1	PFAM: Semialdehyde dehydrogenase, NAD binding domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_003151463.1	PFAM: Cytidylyltransferase family
YP_003151464.1	PFAM:  undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003151465.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_003151466.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_003151467.1	PFAM: PDZ domain (Also known as DHR or GLGF); Trypsin
YP_003151468.1	PFAM: MOSC domain
YP_003151469.1	PFAM: Glutaredoxin; TIGRFAM: conserved hypothetical protein
YP_003151470.1	PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain
YP_003151471.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_003151472.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase
YP_003151473.1	PFAM: Permease family
YP_003151474.1	PFAM: ABC-2 type transporter; TIGRFAM: YhgE/Pip N-terminal domain; YhgE/Pip C-terminal domain
YP_003151475.1	PFAM: ABC-2 type transporter; TIGRFAM: YhgE/Pip C-terminal domain; YhgE/Pip N-terminal domain
YP_003151477.1	PFAM: Acetyltransferase (GNAT) family; Radical SAM superfamily; TIGRFAM: histone acetyltransferase, ELP3 family
YP_003151478.1	PFAM: CorA-like Mg2+ transporter protein
YP_003151479.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_003151480.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
YP_003151481.1	PFAM: Major Facilitator Superfamily; CBS domain pair; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003151482.1	PFAM: Carboxyl transferase domain; Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_003151483.1	PFAM: FabA-like domain
YP_003151484.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_003151485.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_003151486.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_003151487.1	PFAM: 2-nitropropane dioxygenase; TIGRFAM:  enoyl-(acyl-carrier-protein) reductase II
YP_003151489.1	PFAM: MarR family
YP_003151490.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_003151491.1	PFAM: Integral membrane protein DUF6
YP_003151492.1	mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase
YP_003151494.1	PFAM: Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; copper-(or silver)-translocating P-type ATPase; copper ion binding protein
YP_003151495.1	PFAM: Uncharacterised BCR, COG1937
YP_003151496.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_003151497.1	PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE
YP_003151499.1	PFAM: 4Fe-4S binding domain; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_003151500.1	PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Molybdopterin oxidoreductase; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type
YP_003151501.1	PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: selenium donor protein
YP_003151502.1	PFAM: Helix-turn-helix
YP_003151503.1	PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase
YP_003151505.1	PFAM: SirA-like protein
YP_003151507.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component
YP_003151509.1	PFAM: Glycosyl transferases group 1
YP_003151510.1	PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase
YP_003151511.1	PFAM: Elongation factor SelB, winged helix; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU
YP_003151514.1	PFAM: Domain of unknown function (DUF1814)
YP_003151515.1	PFAM: Domain of unknown function (DUF1846)
YP_003151516.1	PFAM: ABC transporter
YP_003151518.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_003151519.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_003151520.1	PFAM: Radical SAM superfamily; HemN C-terminal region
YP_003151521.1	PFAM: Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_003151522.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_003151523.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_003151524.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_003151525.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_003151526.1	PFAM: OB-fold nucleic acid binding domain; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_003151527.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_003151529.1	PFAM: PPIC-type PPIASE domain
YP_003151531.1	PFAM: ACT domain
YP_003151532.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_003151533.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_003151534.1	PFAM: FAD dependent oxidoreductase; TIGRFAM: flavocytochrome c
YP_003151536.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_003151537.1	PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003151538.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003151539.1	TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151540.1	PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_003151541.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB
YP_003151542.1	PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA
YP_003151543.1	PFAM: Sec-independent protein translocase (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_003151544.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003151546.1	PFAM: Amidohydrolase family
YP_003151547.1	PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_003151548.1	PFAM: Acetyltransferase (GNAT) family; Glycoprotease family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; metalloendopeptidase, , glycoprotease family
YP_003151549.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein
YP_003151550.1	PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_003151551.1	PFAM:  tRNA binding domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_003151552.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_003151553.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003151555.1	PFAM: ABC transporter
YP_003151556.1	PFAM: PET112 family, C terminal region; GatB domain; PET112 family, N terminal region; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
YP_003151557.1	PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit
YP_003151558.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit
YP_003151560.1	PFAM: Metallo-beta-lactamase superfamily
YP_003151561.1	PFAM: VanZ like family
YP_003151563.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding conserved hypothetical protein
YP_003151564.1	PFAM: Sodium:neurotransmitter symporter family
YP_003151565.1	PFAM: Glutamine amidotransferases class-II; Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing)
YP_003151566.1	PFAM: Glycosyl transferase family 2
YP_003151567.1	PFAM: Bacterial membrane protein YfhO
YP_003151569.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_003151570.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_003151571.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_003151572.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_003151573.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_003151574.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; HAS barrel domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_003151575.1	PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_003151576.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_003151577.1	PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_003151578.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003151580.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_003151581.1	PFAM: Serine hydroxymethyltransferase
YP_003151582.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B
YP_003151583.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_003151585.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_003151586.1	PFAM: FAD dependent oxidoreductase
YP_003151587.1	PFAM: HI0933-like protein; FAD dependent oxidoreductase; TIGRFAM: conserved hypothetical protein TIGR00275
YP_003151588.1	PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin ferrous iron-binding domain; desulfoferrodoxin
YP_003151589.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_003151590.1	PFAM: NifU-like domain
YP_003151591.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003151592.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003151593.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_003151594.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_003151597.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_003151599.1	PFAM: Radical SAM superfamily
YP_003151600.1	PFAM: Delta-aminolevulinic acid dehydratase
YP_003151601.1	PFAM: Radical SAM superfamily
YP_003151602.1	PFAM: Uroporphyrinogen-III synthase HemD; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_003151603.1	PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_003151604.1	PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_003151605.1	TIGRFAM: siroheme synthase, N-terminal domain
YP_003151606.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003151608.1	PFAM: Glutaredoxin
YP_003151609.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_003151610.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003151611.1	PFAM: FAD binding domain; FAD dependent oxidoreductase
YP_003151612.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003151613.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151614.1	PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_003151615.1	PFAM: Type I 3-dehydroquinase; TIGRFAM: 3-dehydroquinate dehydratase, type I
YP_003151616.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003151619.1	PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit
YP_003151620.1	PFAM: ABC transporter
YP_003151621.1	PFAM: Cobalt transport protein
YP_003151623.1	PFAM: SecD/SecF GG Motif; Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family
YP_003151624.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_003151625.1	PFAM: haloacid dehalogenase-like hydrolase
YP_003151626.1	PFAM: Uncharacterized BCR, COG1636
YP_003151627.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_003151628.1	PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein
YP_003151629.1	PFAM: ExsB; TIGRFAM: exsB protein
YP_003151630.1	PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_003151631.1	PFAM: Na+/H+ antiporter family
YP_003151632.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003151633.1	PFAM: Shikimate kinase
YP_003151634.1	PFAM: Predicted membrane protein (DUF2207)
YP_003151636.1	PFAM: LemA family
YP_003151637.1	PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_003151638.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003151640.1	catalyzes the formation of citrate from acetyl-CoA and oxaloacetate
YP_003151641.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_003151642.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_003151644.1	PFAM: Holliday junction DNA helicase ruvB N-terminus; Holliday junction DNA helicase ruvB C-terminus; ATPase family associated with various cellular activities (AAA); TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_003151645.1	PFAM: RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_003151646.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_003151647.1	PFAM: Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain
YP_003151648.1	PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family
YP_003151649.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_003151650.1	PFAM: Uncharacterized protein family (UPF0051)
YP_003151651.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_003151652.1	PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_003151654.1	PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003151656.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_003151657.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_003151659.1	PFAM: GTPase of unknown function; Nucleoside recognition; Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; TIGRFAM: small GTP-binding protein domain; ferrous iron transporter FeoB; GTP-binding conserved hypothetical protein
YP_003151660.1	PFAM: FeoA domain
YP_003151661.1	PFAM: FeoA domain
YP_003151663.1	TIGRFAM: prevent-host-death family protein
YP_003151664.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_003151665.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain
YP_003151667.1	PFAM: Uncharacterized ACR, COG1430
YP_003151671.1	PFAM: TadE-like protein
YP_003151673.1	PFAM: Class III signal peptide
YP_003151674.1	PFAM: Bacterial type II secretion system protein F domain
YP_003151675.1	PFAM: Bacterial type II secretion system protein F domain
YP_003151676.1	PFAM: Type II/IV secretion system protein
YP_003151678.1	PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_003151679.1	PFAM: DALR domain; tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_003151680.1	PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_003151681.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_003151682.1	PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)
YP_003151683.1	PFAM: OB-fold nucleic acid binding domain; tRNA synthetases class II (D, K and N); TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_003151684.1	PFAM: Prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain; Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain; TIGRFAM: transcription elongation factor GreA
YP_003151685.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003151686.1	PFAM: NlpC/P60 family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151687.1	PFAM: NlpC/P60 family
YP_003151688.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_003151689.1	PFAM: Voltage gated chloride channel
YP_003151690.1	PFAM: ABC transporter
YP_003151691.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003151692.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003151693.1	PFAM: 4Fe-4S binding domain
YP_003151694.1	PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB
YP_003151695.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151696.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003151697.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain
YP_003151700.1	PFAM: Cytochrome c552
YP_003151701.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; FMN-binding domain; TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: flavocytochrome c
YP_003151702.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151703.1	PFAM: TAT (twin-arginine translocation) pathway signal sequence; FAD binding domain; FAD dependent oxidoreductase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151704.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151705.1	PFAM: Bacterial SNF2 helicase associated; Helicase conserved C-terminal domain; SWIM zinc finger; SNF2 family N-terminal domain
YP_003151706.1	molecular chaperone
YP_003151707.1	PFAM: Glycosyl hydrolases family 25
YP_003151708.1	PFAM: Domain of unknown function DUF81
YP_003151709.1	PFAM: Sodium:neurotransmitter symporter family
YP_003151711.1	PFAM: Major Facilitator Superfamily
YP_003151712.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151713.1	PFAM: FAD binding domain; TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151714.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_003151715.1	PFAM: Acyl-ACP thioesterase
YP_003151716.1	PFAM: AIG2-like family
YP_003151717.1	PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type
YP_003151718.1	PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II
YP_003151719.1	PFAM: Aldehyde dehydrogenase family
YP_003151720.1	TIGRFAM: diaminopimelate dehydrogenase
YP_003151721.1	PFAM: FAD dependent oxidoreductase; FMN-binding domain; FAD binding domain; TIGRFAM: flavocytochrome c
YP_003151722.1	PFAM: Bacterial regulatory proteins, luxR family
YP_003151723.1	PFAM: Cyclic nucleotide-binding domain
YP_003151724.1	PFAM: Polysulphide reductase, NrfD
YP_003151725.1	PFAM: 4Fe-4S binding domain
YP_003151726.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003151727.1	PFAM: Methyltransferase domain
YP_003151729.1	PFAM: AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II
YP_003151730.1	PFAM: Collagen binding domain; Cna protein B-type domain; TIGRFAM: LPXTG-motif cell wall anchor domain
YP_003151731.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_003151733.1	PFAM: Bacterial regulatory protein, arsR family
YP_003151734.1	PFAM: Cna protein B-type domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; LPXTG-motif cell wall anchor domain
YP_003151735.1	TIGRFAM: phosphate binding protein
YP_003151736.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease PstA
YP_003151737.1	PFAM: ABC transporter
YP_003151738.1	PFAM: Sel1 repeat
YP_003151739.1	PFAM: HD domain
YP_003151740.1	PFAM: ORF6N domain
YP_003151746.1	TIGRFAM: integrative and conjugative element protein, VC0181 family
YP_003151747.1	PFAM: ThiF family
YP_003151749.1	PFAM: Protein of unknown function (DUF1524); Protein of unknown function DUF262
YP_003151752.1	PFAM: GIY-YIG catalytic domain
YP_003151753.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family
YP_003151754.1	PFAM: Amidinotransferase
YP_003151755.1	PFAM: Amino acid permease; TIGRFAM: arginine/ornithine antiporter
YP_003151756.1	PFAM: AMP-binding enzyme; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase
YP_003151757.1	PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase)
YP_003151759.1	PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
YP_003151760.1	PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases
YP_003151761.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic
YP_003151764.1	PFAM: Exonuclease; TIGRFAM: DnaQ family exonuclease/DinG family helicase, ; exonuclease, DNA polymerase III, epsilon subunit family
YP_003151766.1	PFAM: ATP-grasp domain; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_003151767.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family
YP_003151768.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_003151769.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003151770.1	PFAM: Glucose inhibited division protein; TIGRFAM: glucose-inhibited division protein B
YP_003151771.1	PFAM: R3H domain
YP_003151772.1	PFAM: 60Kd inner membrane protein
YP_003151773.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278
YP_003151774.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_003151775.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type
YP_003151776.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase