-- dump date 20240506_011615 -- class Genbank::Contig -- table contig_comment -- id comment NC_019753.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003620.1.REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003620.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019733.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003621.1.REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003621.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019734.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003622.1.REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003622.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019754.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003623.1.REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003623.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019735.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003624.1.REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003624.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019736.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003625.1.REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003625.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019755.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003626.1.REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003626.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019737.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003627.1.REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003627.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_019756.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP003628.1.REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. KerfeldREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNLREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v.REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPSREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP003628.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087140 Source DNA and Organism available from Cheryl A. Kerfeld (CKerfeld@lbl.gov) Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Annotation by JGI-ORNL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Crinalium epipsammum PCC 9333 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Missing num_replicons :: 9 ref_biomaterial :: PCC 9333 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS finishing_strategy :: Finished GOLD Stamp ID :: Gi04308 Funding Program :: DOE-GEBA 2009 Gene Calling Method :: Prodigal, GenePRIMP Temperature Range :: Mesophile Gram Staining :: Gram- Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 (pre-release), VELVET v. 1.0.13, Parallel phrap v. 4.24 SPS Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 10/08/2023 13:50:09 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,090 CDSs (total) :: 5,032 Genes (coding) :: 4,873 CDSs (with protein) :: 4,873 Genes (RNA) :: 58 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 159 CDSs (without protein) :: 159 Pseudo Genes (ambiguous residues) :: 0 of 159 Pseudo Genes (frameshifted) :: 63 of 159 Pseudo Genes (incomplete) :: 102 of 159 Pseudo Genes (internal stop) :: 18 of 159 Pseudo Genes (multiple problems) :: 21 of 159 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.