-- dump date 20240506_071515 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP046980.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP046980.1.REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com.REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3xREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniIONREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45 Pseudo Genes (incomplete) :: 41 of 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45 Pseudo Genes (incomplete) :: 41 of 45 Pseudo Genes (internal stop) :: 6 of 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45 Pseudo Genes (incomplete) :: 41 of 45 Pseudo Genes (internal stop) :: 6 of 45 Pseudo Genes (multiple problems) :: 10 of 45REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45 Pseudo Genes (incomplete) :: 41 of 45 Pseudo Genes (internal stop) :: 6 of 45 Pseudo Genes (multiple problems) :: 10 of 45 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45 Pseudo Genes (incomplete) :: 41 of 45 Pseudo Genes (internal stop) :: 6 of 45 Pseudo Genes (multiple problems) :: 10 of 45 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP046980.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using prokka v1.11 from http://www.vicbioinformatics.com. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 104.3x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 07/08/2023 06:44:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,234 CDSs (total) :: 2,174 Genes (coding) :: 2,129 CDSs (with protein) :: 2,129 Genes (RNA) :: 60 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 48 ncRNAs :: 3 Pseudo Genes (total) :: 45 CDSs (without protein) :: 45 Pseudo Genes (ambiguous residues) :: 0 of 45 Pseudo Genes (frameshifted) :: 10 of 45 Pseudo Genes (incomplete) :: 41 of 45 Pseudo Genes (internal stop) :: 6 of 45 Pseudo Genes (multiple problems) :: 10 of 45 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.