-- dump date 20240506_063051 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP046605.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP046605.1.REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11.REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: FullREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: YesREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0xREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniIONREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49 Pseudo Genes (incomplete) :: 19 of 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49 Pseudo Genes (incomplete) :: 19 of 49 Pseudo Genes (internal stop) :: 13 of 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49 Pseudo Genes (incomplete) :: 19 of 49 Pseudo Genes (internal stop) :: 13 of 49 Pseudo Genes (multiple problems) :: 13 of 49REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49 Pseudo Genes (incomplete) :: 19 of 49 Pseudo Genes (internal stop) :: 13 of 49 Pseudo Genes (multiple problems) :: 13 of 49 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49 Pseudo Genes (incomplete) :: 19 of 49 Pseudo Genes (internal stop) :: 13 of 49 Pseudo Genes (multiple problems) :: 13 of 49 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP046605.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated using /vol/biotools/share/prokka-1.11/bin/prokka 1.11. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8; canu v. 1.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 64.0x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MiniION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/28/2023 05:29:10 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,326 CDSs (total) :: 2,261 Genes (coding) :: 2,212 CDSs (with protein) :: 2,212 Genes (RNA) :: 65 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 50 ncRNAs :: 3 Pseudo Genes (total) :: 49 CDSs (without protein) :: 49 Pseudo Genes (ambiguous residues) :: 0 of 49 Pseudo Genes (frameshifted) :: 33 of 49 Pseudo Genes (incomplete) :: 19 of 49 Pseudo Genes (internal stop) :: 13 of 49 Pseudo Genes (multiple problems) :: 13 of 49 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.