-- dump date 20140619_045632 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005686552.1 385777387 12422481 212..1543 1 NC_017304.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: cce:Ccel_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1543 12422481 Clo1313_0001 Clostridium thermocellum DSM 1313 chromosomal replication initiator protein DnaA YP_005686552.1 212 D 637887 CDS YP_005686553.1 385777388 12422560 1793..2893 1 NC_017304.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: cce:Ccel_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2893 12422560 Clo1313_0002 Clostridium thermocellum DSM 1313 DNA polymerase III subunit beta YP_005686553.1 1793 D 637887 CDS YP_005686554.1 385777389 12422601 2909..3115 1 NC_017304.1 TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: cbt:CLH_0003 S4 domain protein YaaA; SMART: RNA-binding S4 domain protein; S4 domain-containing protein YaaA 3115 12422601 Clo1313_0003 Clostridium thermocellum DSM 1313 S4 domain-containing protein YaaA YP_005686554.1 2909 D 637887 CDS YP_005686555.1 385777390 12422605 3133..4242 1 NC_017304.1 KEGG: cce:Ccel_0004 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 4242 12422605 Clo1313_0004 Clostridium thermocellum DSM 1313 DNA replication and repair protein RecF YP_005686555.1 3133 D 637887 CDS YP_005686556.1 385777391 12422608 4410..4724 1 NC_017304.1 KEGG: cce:Ccel_0005 hypothetical protein; hypothetical protein 4724 12422608 Clo1313_0005 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686556.1 4410 D 637887 CDS YP_005686557.1 385777392 12422749 4773..6698 1 NC_017304.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: cce:Ccel_0006 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 6698 12422749 Clo1313_0006 Clostridium thermocellum DSM 1313 DNA gyrase subunit B YP_005686557.1 4773 D 637887 CDS YP_005686558.1 385777393 12422789 7685..8461 1 NC_017304.1 KEGG: cce:Ccel_0007 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 8461 12422789 Clo1313_0007 Clostridium thermocellum DSM 1313 cobyrinic acid ac-diamide synthase YP_005686558.1 7685 D 637887 CDS YP_005686559.1 385777394 12422791 8458..9327 1 NC_017304.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_0008 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein 9327 12422791 Clo1313_0008 Clostridium thermocellum DSM 1313 parB-like partition protein YP_005686559.1 8458 D 637887 CDS YP_005686560.1 385777395 12422793 9889..10398 1 NC_017304.1 KEGG: cce:Ccel_0009 hypothetical protein; hypothetical protein 10398 12422793 Clo1313_0009 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686560.1 9889 D 637887 CDS YP_005686561.1 385777396 12419697 10419..11159 1 NC_017304.1 KEGG: cce:Ccel_0010 TPR repeat-containing protein; hypothetical protein 11159 12419697 Clo1313_0010 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686561.1 10419 D 637887 CDS YP_005686562.1 385777397 12419698 11323..12594 1 NC_017304.1 TIGRFAM: seryl-tRNA synthetase; KEGG: tit:Thit_0028 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 12594 12419698 Clo1313_0011 Clostridium thermocellum DSM 1313 seryl-tRNA synthetase YP_005686562.1 11323 D 637887 CDS YP_005686563.1 385777398 12419701 complement(13113..14513) 1 NC_017304.1 PFAM: major facilitator superfamily MFS_1; KEGG: clj:CLJU_c15860 putative permease; major facilitator superfamily protein 14513 12419701 Clo1313_0012 Clostridium thermocellum DSM 1313 major facilitator superfamily protein YP_005686563.1 13113 R 637887 CDS YP_005686564.1 385777399 12419702 complement(14850..15764) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_3336 hypothetical protein; copper amine oxidase-like domain-containing protein 15764 12419702 Clo1313_0013 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005686564.1 14850 R 637887 CDS YP_005686565.1 385777400 12419703 complement(16039..16608) 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: aoe:Clos_2628 S-layer domain-containing protein; S-layer protein 16608 12419703 Clo1313_0014 Clostridium thermocellum DSM 1313 S-layer protein YP_005686565.1 16039 R 637887 CDS YP_005686566.1 385777401 12419704 16820..17353 1 NC_017304.1 KEGG: cce:Ccel_0013 hypothetical protein; hypothetical protein 17353 12419704 Clo1313_0015 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686566.1 16820 D 637887 CDS YP_005686567.1 385777402 12419705 complement(17463..19172) 1 NC_017304.1 PFAM: VanW family protein; G5 domain protein; Putative peptidoglycan binding domain; KEGG: tit:Thit_1561 VanW family protein; VanW family protein 19172 12419705 Clo1313_0016 Clostridium thermocellum DSM 1313 VanW family protein YP_005686567.1 17463 R 637887 CDS YP_005686568.1 385777403 12419706 complement(19517..20788) 1 NC_017304.1 KEGG: cbi:CLJ_B1489 zinc carboxypeptidase family protein; PFAM: peptidase M14 carboxypeptidase A; Peptidoglycan-binding domain 1 protein; Peptidoglycan-binding lysin domain; SMART: peptidase M14 carboxypeptidase A; Peptidoglycan-binding LysM; peptidase M14 carboxypeptidase A 20788 12419706 Clo1313_0017 Clostridium thermocellum DSM 1313 peptidase M14 carboxypeptidase A YP_005686568.1 19517 R 637887 CDS YP_005686569.1 385777404 12419707 20974..21297 1 NC_017304.1 KEGG: aoe:Clos_2803 hypothetical protein; hypothetical protein 21297 12419707 Clo1313_0018 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686569.1 20974 D 637887 CDS YP_005686570.1 385777405 12419708 21451..21729 1 NC_017304.1 KEGG: tit:Thit_0041 pro-sigmaK processing inhibitor BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA; pro-sigmaK processing inhibitor BofA 21729 12419708 Clo1313_0019 Clostridium thermocellum DSM 1313 pro-sigmaK processing inhibitor BofA YP_005686570.1 21451 D 637887 CDS YP_005686571.1 385777406 12419709 22030..22608 1 NC_017304.1 TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; KEGG: csc:Csac_1458 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; pyruvate/ketoisovalerate oxidoreductase subunit gamma 22608 12419709 Clo1313_0020 Clostridium thermocellum DSM 1313 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_005686571.1 22030 D 637887 CDS YP_005686572.1 385777407 12419710 22605..22910 1 NC_017304.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; KEGG: ate:Athe_0875 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta 22910 12419710 Clo1313_0021 Clostridium thermocellum DSM 1313 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta YP_005686572.1 22605 D 637887 CDS YP_005686573.1 385777408 12419711 22927..24111 1 NC_017304.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: csc:Csac_1460 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 24111 12419711 Clo1313_0022 Clostridium thermocellum DSM 1313 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_005686573.1 22927 D 637887 CDS YP_005686574.1 385777409 12419712 24124..25059 1 NC_017304.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: ate:Athe_0877 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate TPP-binding domain-containing protein 25059 12419712 Clo1313_0023 Clostridium thermocellum DSM 1313 thiamine pyrophosphate TPP-binding domain-containing protein YP_005686574.1 24124 D 637887 CDS YP_005686575.1 385777410 12419713 complement(25190..25312) 1 NC_017304.1 manually curated; KEGG: cbf:CLI_0403 putative lipoprotein; lipoprotein 25312 12419713 Clo1313_0024 Clostridium thermocellum DSM 1313 lipoprotein YP_005686575.1 25190 R 637887 CDS YP_005686576.1 385777411 12419714 complement(25455..26294) 1 NC_017304.1 KEGG: dae:Dtox_3198 signal transduction histidine kinase regulating citrate/malate metabolism; hypothetical protein 26294 12419714 Clo1313_0025 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686576.1 25455 R 637887 CDS YP_005686577.1 385777412 12419715 complement(26384..27103) 1 NC_017304.1 KEGG: pth:PTH_1966 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 27103 12419715 Clo1313_0026 Clostridium thermocellum DSM 1313 helix-turn-helix domain-containing protein YP_005686577.1 26384 R 637887 CDS YP_005686578.1 385777413 12419716 27771..28034 1 NC_017304.1 KEGG: amt:Amet_4717 methyl-accepting chemotaxis sensory transducer; hypothetical protein 28034 12419716 Clo1313_0027 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686578.1 27771 D 637887 CDS YP_005686579.1 385777414 12419717 28210..29430 1 NC_017304.1 PFAM: glycosyl transferase family 39; KEGG: cpr:CPR_0954 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; glycosyl transferase family protein 29430 12419717 Clo1313_0028 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005686579.1 28210 D 637887 CDS YP_005686580.1 385777415 12419718 29572..30561 1 NC_017304.1 TIGRFAM: spore coat protein, CotS family; KEGG: cce:Ccel_0017 spore coat protein, CotS family; CotS family spore coat protein 30561 12419718 Clo1313_0029 Clostridium thermocellum DSM 1313 CotS family spore coat protein YP_005686580.1 29572 D 637887 CDS YP_005686581.1 385777416 12419719 complement(30673..32343) 1 NC_017304.1 KEGG: cce:Ccel_0018 formate-tetrahydrofolate ligase FTHFS; PFAM: formate-tetrahydrofolate ligase FTHFS; Formate--tetrahydrofolate ligase 32343 12419719 Clo1313_0030 Clostridium thermocellum DSM 1313 Formate--tetrahydrofolate ligase YP_005686581.1 30673 R 637887 CDS YP_005686582.1 385777417 12419720 32510..33385 1 NC_017304.1 KEGG: cbt:CLH_0458 sporulation peptidase YabG; TIGRFAM: sporulation peptidase YabG; PFAM: peptidase U57 YabG; sporulation peptidase YabG 33385 12419720 Clo1313_0031 Clostridium thermocellum DSM 1313 sporulation peptidase YabG YP_005686582.1 32510 D 637887 CDS YP_005686583.1 385777418 12419721 33620..33886 1 NC_017304.1 PFAM: protein of unknown function DUF1021; KEGG: cce:Ccel_0020 protein of unknown function DUF1021; hypothetical protein 33886 12419721 Clo1313_0032 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686583.1 33620 D 637887 CDS YP_005686584.1 385777419 12419722 34163..35731 1 NC_017304.1 KEGG: cce:Ccel_0021 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; Peptidoglycan-binding lysin domain 35731 12419722 Clo1313_0033 Clostridium thermocellum DSM 1313 Peptidoglycan-binding lysin domain YP_005686584.1 34163 D 637887 CDS YP_005686585.1 385777420 12419723 35989..36825 1 NC_017304.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: cce:Ccel_0022 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 36825 12419723 Clo1313_0034 Clostridium thermocellum DSM 1313 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_005686585.1 35989 D 637887 CDS YP_005686586.1 385777421 12419724 36932..37624 1 NC_017304.1 KEGG: cce:Ccel_0023 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 37624 12419724 Clo1313_0035 Clostridium thermocellum DSM 1313 GntR family transcriptional regulator YP_005686586.1 36932 D 637887 CDS YP_005686587.1 385777422 12419725 complement(37635..37841) 1 NC_017304.1 PFAM: Heavy metal transport/detoxification protein; KEGG: bmq:BMQ_1910 copper-translocating P-type ATPase; heavy metal transport/detoxification protein 37841 12419725 Clo1313_0036 Clostridium thermocellum DSM 1313 heavy metal transport/detoxification protein YP_005686587.1 37635 R 637887 CDS YP_005686588.1 385777423 12419726 38050..38562 1 NC_017304.1 KEGG: swo:Swol_1447 chemotaxis operon protein; hypothetical protein 38562 12419726 Clo1313_0037 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686588.1 38050 D 637887 CDS YP_005686589.1 385777424 12419727 38642..40264 1 NC_017304.1 KEGG: cce:Ccel_0024 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase 40264 12419727 Clo1313_0038 Clostridium thermocellum DSM 1313 AAA ATPase YP_005686589.1 38642 D 637887 CDS YP_005686590.1 385777425 12419728 40359..41087 1 NC_017304.1 PFAM: PspA/IM30 family protein; KEGG: cce:Ccel_0025 phage shock protein A, PspA; PspA/IM30 family protein 41087 12419728 Clo1313_0039 Clostridium thermocellum DSM 1313 PspA/IM30 family protein YP_005686590.1 40359 D 637887 CDS YP_005686591.1 385777426 12419729 41153..41959 1 NC_017304.1 KEGG: cce:Ccel_0027 hypothetical protein; hypothetical protein 41959 12419729 Clo1313_0040 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686591.1 41153 D 637887 CDS YP_005686592.1 385777427 12419730 42139..43731 1 NC_017304.1 PFAM: protein of unknown function DUF342; KEGG: cce:Ccel_0028 protein of unknown function DUF342; hypothetical protein 43731 12419730 Clo1313_0041 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686592.1 42139 D 637887 CDS YP_005686593.1 385777428 12419731 43827..44972 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: cce:Ccel_0031 metallophosphoesterase; metallophosphoesterase 44972 12419731 Clo1313_0042 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005686593.1 43827 D 637887 CDS YP_005686594.1 385777429 12419732 45034..47685 1 NC_017304.1 PFAM: SMC domain protein; KEGG: cpe:CPE2159 hypothetical protein; SMC domain-containing protein 47685 12419732 Clo1313_0043 Clostridium thermocellum DSM 1313 SMC domain-containing protein YP_005686594.1 45034 D 637887 CDS YP_005686595.1 385777430 12419733 47746..48768 1 NC_017304.1 PFAM: NLP/P60 protein; protein of unknown function DUF1058; KEGG: cce:Ccel_0033 NLP/P60 protein; NLP/P60 protein 48768 12419733 Clo1313_0044 Clostridium thermocellum DSM 1313 NLP/P60 protein YP_005686595.1 47746 D 637887 CDS YP_005686596.1 385777431 12419735 50121..50822 1 NC_017304.1 KEGG: cce:Ccel_0035 spore cortex-lytic enzyme; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; spore cortex-lytic protein 50822 12419735 Clo1313_0046 Clostridium thermocellum DSM 1313 spore cortex-lytic protein YP_005686596.1 50121 D 637887 CDS YP_005686597.1 385777432 12419736 50866..52260 1 NC_017304.1 KEGG: cce:Ccel_0036 germination protein YpeB; TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4; germination protein YpeB 52260 12419736 Clo1313_0047 Clostridium thermocellum DSM 1313 germination protein YpeB YP_005686597.1 50866 D 637887 CDS YP_005686598.1 385777433 12419737 52424..53512 1 NC_017304.1 PFAM: Abortive infection protein; KEGG: cce:Ccel_0040 abortive infection protein; abortive infection protein 53512 12419737 Clo1313_0048 Clostridium thermocellum DSM 1313 abortive infection protein YP_005686598.1 52424 D 637887 CDS YP_005686599.1 385777434 12419738 complement(53564..54607) 1 NC_017304.1 SMART: AAA ATPase; KEGG: cce:Ccel_0041 DNA replication protein DnaC; AAA ATPase 54607 12419738 Clo1313_0049 Clostridium thermocellum DSM 1313 AAA ATPase YP_005686599.1 53564 R 637887 CDS YP_005686600.1 385777435 12419739 complement(54692..55618) 1 NC_017304.1 KEGG: cce:Ccel_0042 primosome, DnaD subunit; primosome subunit DnaD 55618 12419739 Clo1313_0050 Clostridium thermocellum DSM 1313 primosome subunit DnaD YP_005686600.1 54692 R 637887 CDS YP_005686601.1 385777436 12419741 56185..57966 1 NC_017304.1 KEGG: cpy:Cphy_0935 HD superfamily phosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 57966 12419741 Clo1313_0051 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005686601.1 56185 D 637887 CDS YP_005686602.1 385777437 12419742 57997..58245 1 NC_017304.1 KEGG: fno:Fnod_0913 response regulator receiver modulated diguanylate cyclase; hypothetical protein 58245 12419742 Clo1313_0052 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686602.1 57997 D 637887 CDS YP_005686603.1 385777438 12419743 complement(58408..59481) 1 NC_017304.1 KEGG: cbi:CLJ_B1962 putative surface protein; hypothetical protein 59481 12419743 Clo1313_0053 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686603.1 58408 R 637887 CDS YP_005686604.1 385777439 12419744 complement(59659..62664) 1 NC_017304.1 KEGG: ace:Acel_0616 cellulose-binding family II protein; PFAM: type 3a cellulose-binding domain protein; SMART: von Willebrand factor type A; type 3a cellulose-binding domain-containing protein 62664 12419744 Clo1313_0054 Clostridium thermocellum DSM 1313 type 3a cellulose-binding domain-containing protein YP_005686604.1 59659 R 637887 CDS YP_005686605.1 385777440 12419745 complement(62788..63618) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_3690 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 63618 12419745 Clo1313_0055 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005686605.1 62788 R 637887 CDS YP_005686606.1 385777441 12419746 64077..64916 1 NC_017304.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ctc:CTC01666 chemotaxis MotA protein; MotA/TolQ/ExbB proton channel 64916 12419746 Clo1313_0056 Clostridium thermocellum DSM 1313 MotA/TolQ/ExbB proton channel YP_005686606.1 64077 D 637887 CDS YP_005686607.1 385777442 12419747 64930..65730 1 NC_017304.1 PFAM: OmpA/MotB domain protein; KEGG: aoe:Clos_1491 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 65730 12419747 Clo1313_0057 Clostridium thermocellum DSM 1313 OmpA/MotB domain-containing protein YP_005686607.1 64930 D 637887 CDS YP_005686608.1 385777443 12419748 65996..66952 1 NC_017304.1 PFAM: protein of unknown function DUF1385; KEGG: cce:Ccel_3374 protein of unknown function DUF1385; hypothetical protein 66952 12419748 Clo1313_0058 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686608.1 65996 D 637887 CDS YP_005686609.1 385777444 12419749 66965..67873 1 NC_017304.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: cce:Ccel_3373 modification methylase, HemK family; PFAM: Methyltransferase type 11; protein-(glutamine-N5) methyltransferase 67873 12419749 Clo1313_0059 Clostridium thermocellum DSM 1313 protein-(glutamine-N5) methyltransferase YP_005686609.1 66965 D 637887 CDS YP_005686610.1 385777445 12419750 complement(67870..68940) 1 NC_017304.1 KEGG: cce:Ccel_3372 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; sporulation integral membrane protein YtvI 68940 12419750 Clo1313_0060 Clostridium thermocellum DSM 1313 sporulation integral membrane protein YtvI YP_005686610.1 67870 R 637887 CDS YP_005686611.1 385777446 12419751 69547..70866 1 NC_017304.1 KEGG: clo:HMPREF0868_1549 electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; RnfABCDGE type electron transport complex subunit C 70866 12419751 Clo1313_0061 Clostridium thermocellum DSM 1313 RnfABCDGE type electron transport complex subunit C YP_005686611.1 69547 D 637887 CDS YP_005686612.1 385777447 12419752 70868..71833 1 NC_017304.1 KEGG: ctc:CTC01020 RnfD/NqrB; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D 71833 12419752 Clo1313_0062 Clostridium thermocellum DSM 1313 RnfABCDGE type electron transport complex subunit D YP_005686612.1 70868 D 637887 CDS YP_005686613.1 385777448 12419753 71817..72410 1 NC_017304.1 KEGG: cdl:CDR20291_0975 electron transport complex protein; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G 72410 12419753 Clo1313_0063 Clostridium thermocellum DSM 1313 RnfABCDGE type electron transport complex subunit G YP_005686613.1 71817 D 637887 CDS YP_005686614.1 385777449 12419754 72413..73069 1 NC_017304.1 KEGG: clo:HMPREF0868_1546 electron transport complex, RnfABCDGE type, E subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit E 73069 12419754 Clo1313_0064 Clostridium thermocellum DSM 1313 RnfABCDGE type electron transport complex subunit E YP_005686614.1 72413 D 637887 CDS YP_005686615.1 385777450 12419755 73075..73662 1 NC_017304.1 KEGG: clo:HMPREF0868_1545 electron transport complex, RnfABCDGE type, A subunit; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit A 73662 12419755 Clo1313_0065 Clostridium thermocellum DSM 1313 RnfABCDGE type electron transport complex subunit A YP_005686615.1 73075 D 637887 CDS YP_005686616.1 385777451 12419756 73701..74504 1 NC_017304.1 KEGG: cno:NT01CX_1584 ferredoxin; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; RnfABCDGE type electron transport complex subunit B 74504 12419756 Clo1313_0066 Clostridium thermocellum DSM 1313 RnfABCDGE type electron transport complex subunit B YP_005686616.1 73701 D 637887 CDS YP_005686617.1 385777452 12419757 complement(74595..74831) 1 NC_017304.1 KEGG: cce:Ccel_3475 hypothetical protein; hypothetical protein 74831 12419757 Clo1313_0067 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686617.1 74595 R 637887 CDS YP_005686618.1 385777453 12419758 75009..75518 1 NC_017304.1 PFAM: shikimate kinase; KEGG: mem:Memar_2255 shikimate kinase; shikimate kinase 75518 12419758 Clo1313_0068 Clostridium thermocellum DSM 1313 shikimate kinase YP_005686618.1 75009 D 637887 CDS YP_005686619.1 385777454 12419760 76031..76510 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pjd:Pjdr2_3003 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 76510 12419760 Clo1313_0070 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005686619.1 76031 D 637887 CDS YP_005686620.1 385777455 12419761 76664..77089 1 NC_017304.1 KEGG: dhd:Dhaf_0958 hypothetical protein; hypothetical protein 77089 12419761 Clo1313_0071 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686620.1 76664 D 637887 CDS YP_005686621.1 385777456 12419762 complement(77161..77964) 1 NC_017304.1 KEGG: pjd:Pjdr2_3763 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 77964 12419762 Clo1313_0072 Clostridium thermocellum DSM 1313 DeoR family transcriptional regulator YP_005686621.1 77161 R 637887 CDS YP_005686622.1 385777457 12419763 78258..79742 1 NC_017304.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: tna:CTN_1624 glycerol kinase 1; Carbohydrate kinase, FGGY-like protein 79742 12419763 Clo1313_0073 Clostridium thermocellum DSM 1313 Carbohydrate kinase, FGGY-like protein YP_005686622.1 78258 D 637887 CDS YP_005686623.1 385777458 12419764 79748..80584 1 NC_017304.1 PFAM: Transketolase domain-containing protein; KEGG: tna:CTN_1622 transketolase, N-terminal subunit; transketolase 80584 12419764 Clo1313_0074 Clostridium thermocellum DSM 1313 transketolase YP_005686623.1 79748 D 637887 CDS YP_005686624.1 385777459 12419765 80581..81522 1 NC_017304.1 PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: tna:CTN_1623 transketolase, C-terminal subunit; transketolase 81522 12419765 Clo1313_0075 Clostridium thermocellum DSM 1313 transketolase YP_005686624.1 80581 D 637887 CDS YP_005686625.1 385777460 12419766 81603..82646 1 NC_017304.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: cpf:CPF_0732 L-iditol 2-dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 82646 12419766 Clo1313_0076 Clostridium thermocellum DSM 1313 alcohol dehydrogenase GroES domain-containing protein YP_005686625.1 81603 D 637887 CDS YP_005686626.1 385777461 12419767 82829..83947 1 NC_017304.1 KEGG: rcu:RCOM_2001640 D-allose-binding periplasmic protein precursor, putative; hypothetical protein 83947 12419767 Clo1313_0077 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686626.1 82829 D 637887 CDS YP_005686627.1 385777462 12419768 83949..85436 1 NC_017304.1 KEGG: dth:DICTH_0297 ribose transport ATP-binding protein RbsA; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 85436 12419768 Clo1313_0078 Clostridium thermocellum DSM 1313 ABC transporter YP_005686627.1 83949 D 637887 CDS YP_005686628.1 385777463 12419769 85455..86438 1 NC_017304.1 PFAM: inner-membrane translocator; KEGG: oih:OB2573 ribose ABC transporter permease; inner-membrane translocator 86438 12419769 Clo1313_0079 Clostridium thermocellum DSM 1313 inner-membrane translocator YP_005686628.1 85455 D 637887 CDS YP_005686629.1 385777464 12419770 86440..87054 1 NC_017304.1 PFAM: Phosphoglycerate mutase; KEGG: eel:EUBELI_00289 phosphoglycerate mutase; phosphoglycerate mutase 87054 12419770 Clo1313_0080 Clostridium thermocellum DSM 1313 phosphoglycerate mutase YP_005686629.1 86440 D 637887 CDS YP_005686630.1 385777465 12419771 complement(87787..91050) 1 NC_017304.1 KEGG: tjr:TherJR_0590 SNF2-related protein; PFAM: SNF2 helicase associated domain protein ; helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase ; helicase domain protein; SNF2 helicase associated domain-containing protein 91050 12419771 Clo1313_0081 Clostridium thermocellum DSM 1313 SNF2 helicase associated domain-containing protein YP_005686630.1 87787 R 637887 CDS YP_005686631.1 385777466 12419772 complement(91265..93073) 1 NC_017304.1 KEGG: cce:Ccel_3460 oligoendopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase F 93073 12419772 Clo1313_0082 Clostridium thermocellum DSM 1313 oligoendopeptidase F YP_005686631.1 91265 R 637887 CDS YP_005686632.1 385777467 12419773 complement(93126..93482) 1 NC_017304.1 KEGG: gwc:GWCH70_1293 MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase 93482 12419773 Clo1313_0083 Clostridium thermocellum DSM 1313 MazG nucleotide pyrophosphohydrolase YP_005686632.1 93126 R 637887 CDS YP_005686633.1 385777468 12419774 complement(93693..96821) 1 NC_017304.1 KEGG: cce:Ccel_0274 S-layer domain protein; PFAM: S-layer domain-containing protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; S-layer protein 96821 12419774 Clo1313_0084 Clostridium thermocellum DSM 1313 S-layer protein YP_005686633.1 93693 R 637887 CDS YP_005686634.1 385777469 12419776 97366..97851 1 NC_017304.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: pth:PTH_0025 cytosine/adenosine deaminases; CMP/dCMP deaminase zinc-binding protein 97851 12419776 Clo1313_0085 Clostridium thermocellum DSM 1313 CMP/dCMP deaminase zinc-binding protein YP_005686634.1 97366 D 637887 CDS YP_005686635.1 385777470 12419779 98287..98895 1 NC_017304.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cbl:CLK_3426 hypothetical protein; cupin 98895 12419779 Clo1313_0087 Clostridium thermocellum DSM 1313 cupin YP_005686635.1 98287 D 637887 CDS YP_005686636.1 385777471 12419780 complement(98924..100213) 1 NC_017304.1 PFAM: 3D domain-containing protein; KEGG: csc:Csac_0761 3D domain-containing protein; hypothetical protein 100213 12419780 Clo1313_0088 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686636.1 98924 R 637887 CDS YP_005686637.1 385777472 12419781 complement(100258..101286) 1 NC_017304.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: cce:Ccel_3000 transcriptional regulator, LacI family; LacI family transcriptional regulator 101286 12419781 Clo1313_0089 Clostridium thermocellum DSM 1313 LacI family transcriptional regulator YP_005686637.1 100258 R 637887 CDS YP_005686638.1 385777473 12419782 101772..104951 1 NC_017304.1 KEGG: bpd:BURPS668_A0166 rhs element Vgr protein; PFAM: S-layer domain-containing protein; type 3a cellulose-binding domain protein; Laminin G sub domain 2; SMART: LamG domain protein jellyroll fold domain protein; S-layer protein 104951 12419782 Clo1313_0090 Clostridium thermocellum DSM 1313 S-layer protein YP_005686638.1 101772 D 637887 CDS YP_005686639.1 385777474 12419783 105136..105951 1 NC_017304.1 PFAM: peptidase U57 YabG; KEGG: cce:Ccel_0237 peptidase U57 YabG; peptidase U57 YabG 105951 12419783 Clo1313_0091 Clostridium thermocellum DSM 1313 peptidase U57 YabG YP_005686639.1 105136 D 637887 CDS YP_005686640.1 385777475 12419784 106095..108053 1 NC_017304.1 KEGG: cno:NT01CX_2289 DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase type IA central domain-containing protein 108053 12419784 Clo1313_0092 Clostridium thermocellum DSM 1313 DNA topoisomerase type IA central domain-containing protein YP_005686640.1 106095 D 637887 CDS YP_005686641.1 385777476 12419785 108303..109160 1 NC_017304.1 PFAM: protein of unknown function DUF368; KEGG: cpy:Cphy_0717 hypothetical protein; hypothetical protein 109160 12419785 Clo1313_0093 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686641.1 108303 D 637887 CDS YP_005686642.1 385777477 12419786 109591..110439 1 NC_017304.1 PFAM: MscS Mechanosensitive ion channel; KEGG: cce:Ccel_3355 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 110439 12419786 Clo1313_0094 Clostridium thermocellum DSM 1313 mechanosensitive ion channel protein MscS YP_005686642.1 109591 D 637887 CDS YP_005686643.1 385777478 12419787 110645..110845 1 NC_017304.1 PFAM: protein of unknown function DUF951; KEGG: cce:Ccel_3354 protein of unknown function DUF951; hypothetical protein 110845 12419787 Clo1313_0095 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686643.1 110645 D 637887 CDS YP_005686644.1 385777479 12419788 110933..112111 1 NC_017304.1 KEGG: tit:Thit_2306 HtrA2 peptidase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap 112111 12419788 Clo1313_0096 Clostridium thermocellum DSM 1313 peptidase S1 and S6 chymotrypsin/Hap YP_005686644.1 110933 D 637887 CDS YP_005686645.1 385777480 12419789 112217..112510 1 NC_017304.1 KEGG: cce:Ccel_3353 hypothetical protein; hypothetical protein 112510 12419789 Clo1313_0097 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686645.1 112217 D 637887 CDS YP_005686646.1 385777481 12419790 112660..113124 1 NC_017304.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cyc:PCC7424_5071 CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding protein 113124 12419790 Clo1313_0098 Clostridium thermocellum DSM 1313 CMP/dCMP deaminase zinc-binding protein YP_005686646.1 112660 D 637887 CDS YP_005686647.1 385777482 12419791 113506..115134 1 NC_017304.1 KEGG: cce:Ccel_3437 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit 115134 12419791 Clo1313_0099 Clostridium thermocellum DSM 1313 acetolactate synthase large subunit YP_005686647.1 113506 D 637887 CDS YP_005686648.1 385777483 12419792 115166..115678 1 NC_017304.1 KEGG: cce:Ccel_3436 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 115678 12419792 Clo1313_0100 Clostridium thermocellum DSM 1313 acetolactate synthase small subunit YP_005686648.1 115166 D 637887 CDS YP_005686649.1 385777484 12419793 115686..116681 1 NC_017304.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: cce:Ccel_3435 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 116681 12419793 Clo1313_0101 Clostridium thermocellum DSM 1313 ketol-acid reductoisomerase YP_005686649.1 115686 D 637887 CDS YP_005686650.1 385777485 12419794 116764..118344 1 NC_017304.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; KEGG: cce:Ccel_3433 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 118344 12419794 Clo1313_0102 Clostridium thermocellum DSM 1313 2-isopropylmalate synthase YP_005686650.1 116764 D 637887 CDS YP_005686651.1 385777486 12419795 118384..118641 1 NC_017304.1 KEGG: cce:Ccel_3432 hypothetical protein; hypothetical protein 118641 12419795 Clo1313_0103 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686651.1 118384 D 637887 CDS YP_005686652.1 385777487 12419796 118837..119544 1 NC_017304.1 KEGG: cac:CA_C1770 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; RNA polymerase, sigma 28 subunit, SigI 119544 12419796 Clo1313_0104 Clostridium thermocellum DSM 1313 RNA polymerase, sigma 28 subunit, SigI YP_005686652.1 118837 D 637887 CDS YP_005686653.1 385777488 12419797 119544..121166 1 NC_017304.1 KEGG: cbe:Cbei_1303 hypothetical protein; hypothetical protein 121166 12419797 Clo1313_0105 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686653.1 119544 D 637887 CDS YP_005686654.1 385777489 12419798 121360..121740 1 NC_017304.1 KEGG: amt:Amet_0768 hypothetical protein; hypothetical protein 121740 12419798 Clo1313_0106 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686654.1 121360 D 637887 CDS YP_005686655.1 385777490 12419799 122010..122453 1 NC_017304.1 KEGG: cbi:CLJ_B1219 rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator 122453 12419799 Clo1313_0107 Clostridium thermocellum DSM 1313 AsnC family transcriptional regulator YP_005686655.1 122010 D 637887 CDS YP_005686656.1 385777491 12419800 122683..123678 1 NC_017304.1 KEGG: aoe:Clos_1324 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase 123678 12419800 Clo1313_0108 Clostridium thermocellum DSM 1313 glutamyl-tRNA reductase YP_005686656.1 122683 D 637887 CDS YP_005686657.1 385777492 12419801 123675..124148 1 NC_017304.1 TIGRFAM: siroheme synthase; KEGG: aoe:Clos_1326 precorrin-6X reductase; siroheme synthase 124148 12419801 Clo1313_0109 Clostridium thermocellum DSM 1313 siroheme synthase YP_005686657.1 123675 D 637887 CDS YP_005686658.1 385777493 12419802 124123..125001 1 NC_017304.1 KEGG: aoe:Clos_1327 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 125001 12419802 Clo1313_0110 Clostridium thermocellum DSM 1313 porphobilinogen deaminase YP_005686658.1 124123 D 637887 CDS YP_005686659.1 385777494 12419803 125001..126482 1 NC_017304.1 KEGG: aoe:Clos_1328 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; uroporphyrin-III C-methyltransferase 126482 12419803 Clo1313_0111 Clostridium thermocellum DSM 1313 uroporphyrin-III C-methyltransferase YP_005686659.1 125001 D 637887 CDS YP_005686660.1 385777495 12419804 126751..127731 1 NC_017304.1 KEGG: aoe:Clos_1329 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase 127731 12419804 Clo1313_0112 Clostridium thermocellum DSM 1313 porphobilinogen synthase YP_005686660.1 126751 D 637887 CDS YP_005686661.1 385777496 12419805 127731..129014 1 NC_017304.1 KEGG: aoe:Clos_1330 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; glutamate-1-semialdehyde-2,1-aminomutase 129014 12419805 Clo1313_0113 Clostridium thermocellum DSM 1313 glutamate-1-semialdehyde-2,1-aminomutase YP_005686661.1 127731 D 637887 CDS YP_005686662.1 385777497 12419806 129323..130393 1 NC_017304.1 KEGG: dhd:Dhaf_4118 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 130393 12419806 Clo1313_0114 Clostridium thermocellum DSM 1313 sulfate ABC transporter substrate-binding protein YP_005686662.1 129323 D 637887 CDS YP_005686663.1 385777498 12419807 130418..131266 1 NC_017304.1 KEGG: dhd:Dhaf_4117 sulfate ABC transporter, inner membrane subunit CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 131266 12419807 Clo1313_0115 Clostridium thermocellum DSM 1313 sulfate ABC transporter permease YP_005686663.1 130418 D 637887 CDS YP_005686664.1 385777499 12419808 131353..132237 1 NC_017304.1 KEGG: dsy:DSY2956 hypothetical protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 132237 12419808 Clo1313_0116 Clostridium thermocellum DSM 1313 sulfate ABC transporter permease YP_005686664.1 131353 D 637887 CDS YP_005686665.1 385777500 12419809 132280..133344 1 NC_017304.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: dhd:Dhaf_4115 sulfate ABC transporter, ATPase subunit; SMART: AAA ATPase; sulfate ABC transporter ATPase 133344 12419809 Clo1313_0117 Clostridium thermocellum DSM 1313 sulfate ABC transporter ATPase YP_005686665.1 132280 D 637887 CDS YP_005686666.1 385777501 12419810 133412..134131 1 NC_017304.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; KEGG: dsy:DSY2953 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase 134131 12419810 Clo1313_0118 Clostridium thermocellum DSM 1313 adenylylsulfate reductase YP_005686666.1 133412 D 637887 CDS YP_005686667.1 385777502 12419811 134419..135300 1 NC_017304.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: dsy:DSY2952 sulfate adenylyltransferase subunit 2; phosphoadenosine phosphosulfate reductase 135300 12419811 Clo1313_0119 Clostridium thermocellum DSM 1313 phosphoadenosine phosphosulfate reductase YP_005686667.1 134419 D 637887 CDS YP_005686668.1 385777503 12419812 135302..137101 1 NC_017304.1 KEGG: dhd:Dhaf_4111 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; adenylylsulfate kinase; sulfate adenylyltransferase, large subunit 137101 12419812 Clo1313_0120 Clostridium thermocellum DSM 1313 sulfate adenylyltransferase, large subunit YP_005686668.1 135302 D 637887 CDS YP_005686669.1 385777504 12419813 137120..137329 1 NC_017304.1 KEGG: dhd:Dhaf_4110 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 137329 12419813 Clo1313_0121 Clostridium thermocellum DSM 1313 thiamine biosynthesis protein ThiS YP_005686669.1 137120 D 637887 CDS YP_005686670.1 385777505 12419814 137326..138138 1 NC_017304.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: dhd:Dhaf_4109 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 138138 12419814 Clo1313_0122 Clostridium thermocellum DSM 1313 UBA/THIF-type NAD/FAD binding protein YP_005686670.1 137326 D 637887 CDS YP_005686671.1 385777506 12419815 138162..138581 1 NC_017304.1 KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 138581 12419815 Clo1313_0123 Clostridium thermocellum DSM 1313 Mov34/MPN/PAD-1 family protein YP_005686671.1 138162 D 637887 CDS YP_005686672.1 385777507 12419816 138582..139454 1 NC_017304.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: dhd:Dhaf_4107 nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region 139454 12419816 Clo1313_0124 Clostridium thermocellum DSM 1313 nitrite and sulfite reductase 4Fe-4S region YP_005686672.1 138582 D 637887 CDS YP_005686673.1 385777508 12419817 139492..139737 1 NC_017304.1 PFAM: SirA-like domain-containing protein; KEGG: csc:Csac_1638 SirA family protein; SirA-like domain-containing protein 139737 12419817 Clo1313_0125 Clostridium thermocellum DSM 1313 SirA-like domain-containing protein YP_005686673.1 139492 D 637887 CDS YP_005686674.1 385777509 12419818 complement(139811..141208) 1 NC_017304.1 KEGG: gtn:GTNG_0327 hypothetical protein; manually curated; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, GerMN domain 141208 12419818 Clo1313_0126 Clostridium thermocellum DSM 1313 Lipoprotein LpqB, GerMN domain YP_005686674.1 139811 R 637887 CDS YP_005686675.1 385777510 12419819 complement(141211..141792) 1 NC_017304.1 KEGG: swo:Swol_1212 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 141792 12419819 Clo1313_0127 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005686675.1 141211 R 637887 CDS YP_005686676.1 385777511 12419820 complement(142114..142677) 1 NC_017304.1 KEGG: dsy:DSY1956 hypothetical protein; hypothetical protein 142677 12419820 Clo1313_0128 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686676.1 142114 R 637887 CDS YP_005686677.1 385777512 12419821 complement(142712..143200) 1 NC_017304.1 KEGG: dsy:DSY1956 hypothetical protein; hypothetical protein 143200 12419821 Clo1313_0129 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686677.1 142712 R 637887 CDS YP_005686678.1 385777513 12419823 144172..144354 1 NC_017304.1 KEGG: gym:GYMC10_3914 integral membrane sensor signal transduction histidine kinase; hypothetical protein 144354 12419823 Clo1313_0131 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686678.1 144172 D 637887 CDS YP_005686679.1 385777514 12419824 144385..144711 1 NC_017304.1 KEGG: cce:Ccel_0666 cell envelope-related transcriptional attenuator; hypothetical protein 144711 12419824 Clo1313_0132 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686679.1 144385 D 637887 CDS YP_005686680.1 385777515 12419825 144910..146421 1 NC_017304.1 KEGG: cbe:Cbei_2360 alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein; alpha-L-arabinofuranosidase domain-containing protein 146421 12419825 Clo1313_0133 Clostridium thermocellum DSM 1313 alpha-L-arabinofuranosidase domain-containing protein YP_005686680.1 144910 D 637887 CDS YP_005686681.1 385777516 12419826 146526..146702 1 NC_017304.1 hypothetical protein 146702 12419826 Clo1313_0134 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686681.1 146526 D 637887 CDS YP_005686682.1 385777517 12419827 146817..147791 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: cce:Ccel_0752 glycoside hydrolase family 26; Dockerin type 1 147791 12419827 Clo1313_0135 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005686682.1 146817 D 637887 CDS YP_005686683.1 385777518 12419828 complement(148028..149011) 1 NC_017304.1 PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: bfr:BF3652 putative glycosyltransferase; glycosyltransferase family protein 149011 12419828 Clo1313_0136 Clostridium thermocellum DSM 1313 glycosyltransferase family protein YP_005686683.1 148028 R 637887 CDS YP_005686684.1 385777519 12419829 complement(149050..150084) 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: dhd:Dhaf_4173 radical SAM domain protein; radical SAM protein 150084 12419829 Clo1313_0137 Clostridium thermocellum DSM 1313 radical SAM protein YP_005686684.1 149050 R 637887 CDS YP_005686685.1 385777520 12419830 complement(150081..151103) 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: dhd:Dhaf_4172 radical SAM domain protein; radical SAM protein 151103 12419830 Clo1313_0138 Clostridium thermocellum DSM 1313 radical SAM protein YP_005686685.1 150081 R 637887 CDS YP_005686686.1 385777521 12419831 complement(151137..152162) 1 NC_017304.1 KEGG: dhd:Dhaf_4175 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 152162 12419831 Clo1313_0139 Clostridium thermocellum DSM 1313 radical SAM protein YP_005686686.1 151137 R 637887 CDS YP_005686687.1 385777522 12419832 complement(152146..153399) 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: ppd:Ppro_3344 glycosyl transferase, group 1; group 1 glycosyl transferase 153399 12419832 Clo1313_0140 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005686687.1 152146 R 637887 CDS YP_005686688.1 385777523 12419833 complement(153417..154568) 1 NC_017304.1 TIGRFAM: methyltransferase FkbM family; KEGG: cbk:CLL_A2332 putative methyltransferase FkbM family; FkbM family methyltransferase 154568 12419833 Clo1313_0141 Clostridium thermocellum DSM 1313 FkbM family methyltransferase YP_005686688.1 153417 R 637887 CDS YP_005686689.1 385777524 12419834 complement(154723..155736) 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: dhd:Dhaf_4173 radical SAM domain protein; radical SAM protein 155736 12419834 Clo1313_0142 Clostridium thermocellum DSM 1313 radical SAM protein YP_005686689.1 154723 R 637887 CDS YP_005686690.1 385777525 12419835 complement(155793..157292) 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: dhd:Dhaf_4180 glycosyl transferase family 2; family 2 glycosyl transferase 157292 12419835 Clo1313_0143 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005686690.1 155793 R 637887 CDS YP_005686691.1 385777526 12419836 complement(157339..158256) 1 NC_017304.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mst:Msp_0537 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 158256 12419836 Clo1313_0144 Clostridium thermocellum DSM 1313 NAD-dependent epimerase/dehydratase YP_005686691.1 157339 R 637887 CDS YP_005686692.1 385777527 12419837 158623..159996 1 NC_017304.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gem:GM21_3400 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 159996 12419837 Clo1313_0145 Clostridium thermocellum DSM 1313 DegT/DnrJ/EryC1/StrS aminotransferase YP_005686692.1 158623 D 637887 CDS YP_005686693.1 385777528 12419838 160134..160682 1 NC_017304.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: mar:MAE_10920 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 160682 12419838 Clo1313_0146 Clostridium thermocellum DSM 1313 dTDP-4-dehydrorhamnose 3,5-epimerase YP_005686693.1 160134 D 637887 CDS YP_005686694.1 385777529 12419839 complement(160710..161849) 1 NC_017304.1 KEGG: cbk:CLL_A2337 CDP-glucose 4,6-dehydratase; TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; CDP-glucose 4,6-dehydratase 161849 12419839 Clo1313_0147 Clostridium thermocellum DSM 1313 CDP-glucose 4,6-dehydratase YP_005686694.1 160710 R 637887 CDS YP_005686695.1 385777530 12419840 complement(161925..162704) 1 NC_017304.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; KEGG: cbk:CLL_A2338 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase 162704 12419840 Clo1313_0148 Clostridium thermocellum DSM 1313 glucose-1-phosphate cytidylyltransferase YP_005686695.1 161925 R 637887 CDS YP_005686696.1 385777531 12419841 complement(163006..164787) 1 NC_017304.1 KEGG: pfh:PFHG_02073 conserved hypothetical protein; hypothetical protein 164787 12419841 Clo1313_0149 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686696.1 163006 R 637887 CDS YP_005686697.1 385777532 12419842 complement(165028..166251) 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 166251 12419842 Clo1313_0150 Clostridium thermocellum DSM 1313 transposase mutator type YP_005686697.1 165028 R 637887 CDS YP_005686698.1 385777533 12419843 complement(166396..167082) 1 NC_017304.1 KEGG: str:Sterm_3131 hypothetical protein; hypothetical protein 167082 12419843 Clo1313_0151 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686698.1 166396 R 637887 CDS YP_005686699.1 385777534 12419844 complement(168006..169367) 1 NC_017304.1 KEGG: dsy:DSY2850 hypothetical protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 169367 12419844 Clo1313_0152 Clostridium thermocellum DSM 1313 radical SAM protein YP_005686699.1 168006 R 637887 CDS YP_005686700.1 385777535 12419845 complement(169416..169586) 1 NC_017304.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cbb:CLD_0184 cupin domain-containing protein; cupin 169586 12419845 Clo1313_0153 Clostridium thermocellum DSM 1313 cupin YP_005686700.1 169416 R 637887 CDS YP_005686701.1 385777536 12419846 complement(169744..170418) 1 NC_017304.1 KEGG: dhd:Dhaf_4247 hypothetical protein; hypothetical protein 170418 12419846 Clo1313_0154 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686701.1 169744 R 637887 CDS YP_005686702.1 385777537 12419847 complement(170559..170918) 1 NC_017304.1 KEGG: cpy:Cphy_0899 hypothetical protein; hypothetical protein 170918 12419847 Clo1313_0155 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686702.1 170559 R 637887 CDS YP_005686703.1 385777538 12419848 complement(171089..171298) 1 NC_017304.1 KEGG: mba:Mbar_A0792 acetyltransferase; hypothetical protein 171298 12419848 Clo1313_0156 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686703.1 171089 R 637887 CDS YP_005686704.1 385777539 12419849 171661..174051 1 NC_017304.1 KEGG: smf:Smon_0610 hypothetical protein; hypothetical protein 174051 12419849 Clo1313_0157 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686704.1 171661 D 637887 CDS YP_005686705.1 385777540 12419851 complement(174977..175597) 1 NC_017304.1 KEGG: tde:TDE1630 hypothetical protein; hypothetical protein 175597 12419851 Clo1313_0159 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686705.1 174977 R 637887 CDS YP_005686706.1 385777541 12419852 176101..176868 1 NC_017304.1 KEGG: dsy:DSY3395 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 176868 12419852 Clo1313_0160 Clostridium thermocellum DSM 1313 ABC transporter YP_005686706.1 176101 D 637887 CDS YP_005686707.1 385777542 12419853 176861..177673 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dhd:Dhaf_4556 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 177673 12419853 Clo1313_0161 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005686707.1 176861 D 637887 CDS YP_005686708.1 385777543 12419854 177720..178730 1 NC_017304.1 KEGG: cce:Ccel_0878 hypothetical protein; hypothetical protein 178730 12419854 Clo1313_0162 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686708.1 177720 D 637887 CDS YP_005686709.1 385777544 12419855 178880..180172 1 NC_017304.1 KEGG: afl:Aflv_1549 hypothetical protein; hypothetical protein 180172 12419855 Clo1313_0163 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686709.1 178880 D 637887 CDS YP_005686710.1 385777545 12419856 complement(180204..180674) 1 NC_017304.1 PFAM: adenylate cyclase; KEGG: dds:Ddes_1849 adenylate cyclase; adenylate cyclase 180674 12419856 Clo1313_0164 Clostridium thermocellum DSM 1313 adenylate cyclase YP_005686710.1 180204 R 637887 CDS YP_005686711.1 385777546 12419857 complement(180920..182440) 1 NC_017304.1 KEGG: hmo:HM1_0233 exopolyphosphatase, putative; PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Ppx/GppA phosphatase 182440 12419857 Clo1313_0165 Clostridium thermocellum DSM 1313 Ppx/GppA phosphatase YP_005686711.1 180920 R 637887 CDS YP_005686712.1 385777547 12419858 182794..183900 1 NC_017304.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: drm:Dred_2674 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 183900 12419858 Clo1313_0166 Clostridium thermocellum DSM 1313 iron-containing alcohol dehydrogenase YP_005686712.1 182794 D 637887 CDS YP_005686713.1 385777548 12419859 183912..184397 1 NC_017304.1 TIGRFAM: phosphodiesterase, MJ0936 family; KEGG: dau:Daud_0456 phosphodiesterase; phosphodiesterase 184397 12419859 Clo1313_0167 Clostridium thermocellum DSM 1313 phosphodiesterase YP_005686713.1 183912 D 637887 CDS YP_005686714.1 385777549 12419860 184437..185618 1 NC_017304.1 TIGRFAM: dihydropteroate synthase; KEGG: tjr:TherJR_0210 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 185618 12419860 Clo1313_0168 Clostridium thermocellum DSM 1313 dihydropteroate synthase YP_005686714.1 184437 D 637887 CDS YP_005686715.1 385777550 12419861 185646..186023 1 NC_017304.1 SMART: dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; KEGG: amt:Amet_2162 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 186023 12419861 Clo1313_0169 Clostridium thermocellum DSM 1313 dihydroneopterin aldolase YP_005686715.1 185646 D 637887 CDS YP_005686716.1 385777551 12419862 186013..186528 1 NC_017304.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: tmt:Tmath_1994 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 186528 12419862 Clo1313_0170 Clostridium thermocellum DSM 1313 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_005686716.1 186013 D 637887 CDS YP_005686717.1 385777552 12419863 186597..187223 1 NC_017304.1 KEGG: cce:Ccel_0133 hypothetical protein; hypothetical protein 187223 12419863 Clo1313_0171 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686717.1 186597 D 637887 CDS YP_005686718.1 385777553 12419864 187227..188243 1 NC_017304.1 KEGG: cce:Ccel_0134 biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase 188243 12419864 Clo1313_0172 Clostridium thermocellum DSM 1313 biotin--acetyl-CoA-carboxylase ligase YP_005686718.1 187227 D 637887 CDS YP_005686719.1 385777554 12419865 188334..189122 1 NC_017304.1 PFAM: amidohydrolase 2; KEGG: csc:Csac_1139 amidohydrolase 2; amidohydrolase 2 189122 12419865 Clo1313_0173 Clostridium thermocellum DSM 1313 amidohydrolase 2 YP_005686719.1 188334 D 637887 CDS YP_005686720.1 385777555 12419866 189216..189713 1 NC_017304.1 KEGG: cce:Ccel_0135 hypothetical protein; hypothetical protein 189713 12419866 Clo1313_0174 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686720.1 189216 D 637887 CDS YP_005686721.1 385777556 12419867 189735..190502 1 NC_017304.1 TIGRFAM: transcriptional activator, Baf family; KEGG: cce:Ccel_0136 pantothenate kinase; PFAM: Bvg accessory factor; Baf family transcriptional activator 190502 12419867 Clo1313_0175 Clostridium thermocellum DSM 1313 Baf family transcriptional activator YP_005686721.1 189735 D 637887 CDS YP_005686722.1 385777557 12419868 complement(190588..191946) 1 NC_017304.1 KEGG: noc:Noc_1953 hypothetical protein; hypothetical protein 191946 12419868 Clo1313_0176 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686722.1 190588 R 637887 CDS YP_005686723.1 385777558 12419869 192359..194278 1 NC_017304.1 KEGG: bpu:BPUM_1560 glycoside hydrolase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Dockerin type 1; SMART: glycoside hydrolase family 10; glycoside hydrolase 194278 12419869 Clo1313_0177 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686723.1 192359 D 637887 CDS YP_005686724.1 385777559 12419870 194504..194920 1 NC_017304.1 KEGG: mru:mru_0930 hypothetical protein; hypothetical protein 194920 12419870 Clo1313_0178 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686724.1 194504 D 637887 CDS YP_005686725.1 385777560 12419871 194971..195438 1 NC_017304.1 KEGG: psl:Psta_2458 hypothetical protein; hypothetical protein 195438 12419871 Clo1313_0179 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686725.1 194971 D 637887 CDS YP_005686726.1 385777561 12419872 195543..196625 1 NC_017304.1 KEGG: cce:Ccel_0255 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 196625 12419872 Clo1313_0180 Clostridium thermocellum DSM 1313 peptide chain release factor 1 YP_005686726.1 195543 D 637887 CDS YP_005686727.1 385777562 12419873 196692..197432 1 NC_017304.1 PFAM: zinc/iron permease; KEGG: cce:Ccel_0256 zinc/iron permease; zinc/iron permease 197432 12419873 Clo1313_0181 Clostridium thermocellum DSM 1313 zinc/iron permease YP_005686727.1 196692 D 637887 CDS YP_005686728.1 385777563 12419874 197566..198621 1 NC_017304.1 KEGG: tte:TTE0145 putative translation factor (SUA5); TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein; Sua5/YciO/YrdC/YwlC family protein 198621 12419874 Clo1313_0182 Clostridium thermocellum DSM 1313 Sua5/YciO/YrdC/YwlC family protein YP_005686728.1 197566 D 637887 CDS YP_005686729.1 385777564 12419875 198688..199167 1 NC_017304.1 KEGG: cce:Ccel_0258 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 199167 12419875 Clo1313_0183 Clostridium thermocellum DSM 1313 protein tyrosine phosphatase YP_005686729.1 198688 D 637887 CDS YP_005686730.1 385777565 12419876 199265..199714 1 NC_017304.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: cce:Ccel_0259 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 199714 12419876 Clo1313_0184 Clostridium thermocellum DSM 1313 RpiB/LacA/LacB family sugar-phosphate isomerase YP_005686730.1 199265 D 637887 CDS YP_005686731.1 385777566 12419877 199730..200359 1 NC_017304.1 KEGG: cce:Ccel_0260 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 200359 12419877 Clo1313_0185 Clostridium thermocellum DSM 1313 uracil phosphoribosyltransferase YP_005686731.1 199730 D 637887 CDS YP_005686732.1 385777567 12419878 200391..200852 1 NC_017304.1 KEGG: cce:Ccel_0261 CMP/dCMP deaminase zinc-binding; manually curated; PFAM: CMP/dCMP deaminase zinc-binding; CMP/dCMP deaminase zinc-binding protein 200852 12419878 Clo1313_0186 Clostridium thermocellum DSM 1313 CMP/dCMP deaminase zinc-binding protein YP_005686732.1 200391 D 637887 CDS YP_005686733.1 385777568 12419879 200934..202064 1 NC_017304.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: cce:Ccel_0262 UDP-N-acetylglucosamine 2-epimerase; glycosyl transferase family protein 202064 12419879 Clo1313_0187 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005686733.1 200934 D 637887 CDS YP_005686734.1 385777569 12419880 202084..203238 1 NC_017304.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: cce:Ccel_0262 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 203238 12419880 Clo1313_0188 Clostridium thermocellum DSM 1313 UDP-N-acetylglucosamine 2-epimerase YP_005686734.1 202084 D 637887 CDS YP_005686735.1 385777570 12419881 203537..204292 1 NC_017304.1 KEGG: cce:Ccel_0266 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A 204292 12419881 Clo1313_0189 Clostridium thermocellum DSM 1313 ATP synthase F0 subunit A YP_005686735.1 203537 D 637887 CDS YP_005686736.1 385777571 12419882 204305..204526 1 NC_017304.1 KEGG: cce:Ccel_0267 ATP synthase F0, C subunit; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 subunit C 204526 12419882 Clo1313_0190 Clostridium thermocellum DSM 1313 ATP synthase F0 subunit C YP_005686736.1 204305 D 637887 CDS YP_005686737.1 385777572 12419883 204600..205145 1 NC_017304.1 KEGG: cce:Ccel_0268 ATP synthase F0, B subunit; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B 205145 12419883 Clo1313_0191 Clostridium thermocellum DSM 1313 ATP synthase F0 subunit B YP_005686737.1 204600 D 637887 CDS YP_005686738.1 385777573 12419884 205176..205742 1 NC_017304.1 KEGG: cce:Ccel_0269 ATP synthase F1, delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 205742 12419884 Clo1313_0192 Clostridium thermocellum DSM 1313 ATP synthase F1 subunit delta YP_005686738.1 205176 D 637887 CDS YP_005686739.1 385777574 12419885 205843..207363 1 NC_017304.1 KEGG: cce:Ccel_0270 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 207363 12419885 Clo1313_0193 Clostridium thermocellum DSM 1313 ATP synthase F1 subunit alpha YP_005686739.1 205843 D 637887 CDS YP_005686740.1 385777575 12419886 207412..208299 1 NC_017304.1 KEGG: cce:Ccel_0271 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 208299 12419886 Clo1313_0194 Clostridium thermocellum DSM 1313 ATP synthase F1 subunit gamma YP_005686740.1 207412 D 637887 CDS YP_005686741.1 385777576 12419887 208378..209772 1 NC_017304.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cce:Ccel_0272 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta 209772 12419887 Clo1313_0195 Clostridium thermocellum DSM 1313 ATP synthase F1 subunit beta YP_005686741.1 208378 D 637887 CDS YP_005686742.1 385777577 12419888 209785..210192 1 NC_017304.1 KEGG: cce:Ccel_0273 ATP synthase F1, epsilon subunit; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; ATP synthase F1 subunit epsilon 210192 12419888 Clo1313_0196 Clostridium thermocellum DSM 1313 ATP synthase F1 subunit epsilon YP_005686742.1 209785 D 637887 CDS YP_005686743.1 385777578 12419889 210663..212417 1 NC_017304.1 KEGG: rle:RL1102 hypothetical protein; hypothetical protein 212417 12419889 Clo1313_0197 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686743.1 210663 D 637887 CDS YP_005686744.1 385777579 12419890 212594..217480 1 NC_017304.1 KEGG: cce:Ccel_0276 fibronectin, type III; PFAM: S-layer domain-containing protein; SMART: Fibronectin type III domain protein; S-layer protein 217480 12419890 Clo1313_0198 Clostridium thermocellum DSM 1313 S-layer protein YP_005686744.1 212594 D 637887 CDS YP_005686745.1 385777580 12419891 217496..221326 1 NC_017304.1 KEGG: cce:Ccel_0277 fibronectin type III domain protein; fibronectin type III domain-containing protein 221326 12419891 Clo1313_0199 Clostridium thermocellum DSM 1313 fibronectin type III domain-containing protein YP_005686745.1 217496 D 637887 CDS YP_005686746.1 385777581 12419892 221377..222237 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0278 S-layer domain protein; S-layer protein 222237 12419892 Clo1313_0200 Clostridium thermocellum DSM 1313 S-layer protein YP_005686746.1 221377 D 637887 CDS YP_005686747.1 385777582 12419893 222664..223416 1 NC_017304.1 PFAM: protein of unknown function DUF1779; KEGG: cce:Ccel_0279 protein of unknown function DUF1779; hypothetical protein 223416 12419893 Clo1313_0201 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686747.1 222664 D 637887 CDS YP_005686748.1 385777583 12419894 223482..224750 1 NC_017304.1 KEGG: cce:Ccel_0280 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 224750 12419894 Clo1313_0202 Clostridium thermocellum DSM 1313 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005686748.1 223482 D 637887 CDS YP_005686749.1 385777584 12419895 225041..226045 1 NC_017304.1 KEGG: cce:Ccel_0281 stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D; stage II sporulation protein D 226045 12419895 Clo1313_0203 Clostridium thermocellum DSM 1313 stage II sporulation protein D YP_005686749.1 225041 D 637887 CDS YP_005686750.1 385777585 12419896 226127..227047 1 NC_017304.1 PFAM: Peptidase M23; KEGG: amt:Amet_0360 peptidase M23B; peptidase M23 227047 12419896 Clo1313_0204 Clostridium thermocellum DSM 1313 peptidase M23 YP_005686750.1 226127 D 637887 CDS YP_005686751.1 385777586 12419897 227390..227653 1 NC_017304.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: cpy:Cphy_0210 sporulation transcriptional regulator SpoIIID; sporulation transcriptional regulator SpoIIID 227653 12419897 Clo1313_0205 Clostridium thermocellum DSM 1313 sporulation transcriptional regulator SpoIIID YP_005686751.1 227390 D 637887 CDS YP_005686752.1 385777587 12419898 227823..228857 1 NC_017304.1 KEGG: cce:Ccel_3102 rod shape-determining protein Mbl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 228857 12419898 Clo1313_0206 Clostridium thermocellum DSM 1313 MreB/Mrl family cell shape determining protein YP_005686752.1 227823 D 637887 CDS YP_005686753.1 385777588 12419899 229072..229851 1 NC_017304.1 KEGG: cce:Ccel_3101 protein of unknown function DUF1078 domain protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-basal body protein 229851 12419899 Clo1313_0207 Clostridium thermocellum DSM 1313 flagellar hook-basal body protein YP_005686753.1 229072 D 637887 CDS YP_005686754.1 385777589 12419900 229865..230665 1 NC_017304.1 KEGG: cce:Ccel_3100 protein of unknown function DUF1078 domain protein; TIGRFAM: flagellar hook-basal body protein; flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-basal body protein 230665 12419900 Clo1313_0208 Clostridium thermocellum DSM 1313 flagellar hook-basal body protein YP_005686754.1 229865 D 637887 CDS YP_005686755.1 385777590 12419901 230733..231083 1 NC_017304.1 PFAM: Flagellar protein FlgJ-like; KEGG: cce:Ccel_3099 hypothetical protein; Flagellar protein FlgJ-like protein 231083 12419901 Clo1313_0209 Clostridium thermocellum DSM 1313 Flagellar protein FlgJ-like protein YP_005686755.1 230733 D 637887 CDS YP_005686756.1 385777591 12419902 231135..232283 1 NC_017304.1 KEGG: cce:Ccel_3098 exopolysaccharide biosynthesis protein; exopolysaccharide biosynthesis protein 232283 12419902 Clo1313_0210 Clostridium thermocellum DSM 1313 exopolysaccharide biosynthesis protein YP_005686756.1 231135 D 637887 CDS YP_005686757.1 385777592 12419903 complement(232381..232731) 1 NC_017304.1 KEGG: bth:BT_1466 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 232731 12419903 Clo1313_0211 Clostridium thermocellum DSM 1313 ABC transporter ATP-binding protein YP_005686757.1 232381 R 637887 CDS YP_005686758.1 385777593 12419905 233630..234070 1 NC_017304.1 KEGG: cce:Ccel_3097 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(ACP) dehydratase FabZ 234070 12419905 Clo1313_0213 Clostridium thermocellum DSM 1313 beta-hydroxyacyl-(ACP) dehydratase FabZ YP_005686758.1 233630 D 637887 CDS YP_005686759.1 385777594 12419906 complement(234173..235582) 1 NC_017304.1 KEGG: cce:Ccel_3096 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramate--L-alanine ligase 235582 12419906 Clo1313_0214 Clostridium thermocellum DSM 1313 UDP-N-acetylmuramate--L-alanine ligase YP_005686759.1 234173 R 637887 CDS YP_005686760.1 385777595 12419907 235980..236798 1 NC_017304.1 KEGG: cce:Ccel_3095 pur operon repressor; TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; purine operon repressor, PurR 236798 12419907 Clo1313_0215 Clostridium thermocellum DSM 1313 purine operon repressor, PurR YP_005686760.1 235980 D 637887 CDS YP_005686761.1 385777596 12419908 236996..237280 1 NC_017304.1 PFAM: SpoVG family protein; KEGG: clj:CLJU_c41790 putative stage V sporulation protein G; SpoVG family protein 237280 12419908 Clo1313_0216 Clostridium thermocellum DSM 1313 SpoVG family protein YP_005686761.1 236996 D 637887 CDS YP_005686762.1 385777597 12419909 237760..239145 1 NC_017304.1 KEGG: tte:TTE2572 N-acetylglucosamine-1-phosphate uridyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 239145 12419909 Clo1313_0217 Clostridium thermocellum DSM 1313 UDP-N-acetylglucosamine pyrophosphorylase YP_005686762.1 237760 D 637887 CDS YP_005686763.1 385777598 12419910 239204..240166 1 NC_017304.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: cce:Ccel_3092 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 240166 12419910 Clo1313_0218 Clostridium thermocellum DSM 1313 ribose-phosphate pyrophosphokinase YP_005686763.1 239204 D 637887 CDS YP_005686764.1 385777599 12419911 240430..240999 1 NC_017304.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: cce:Ccel_3091 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 240999 12419911 Clo1313_0219 Clostridium thermocellum DSM 1313 peptidyl-tRNA hydrolase YP_005686764.1 240430 D 637887 CDS YP_005686765.1 385777600 12419912 241027..244563 1 NC_017304.1 TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: cce:Ccel_3090 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 244563 12419912 Clo1313_0220 Clostridium thermocellum DSM 1313 transcription-repair coupling factor YP_005686765.1 241027 D 637887 CDS YP_005686766.1 385777601 12419913 244731..245825 1 NC_017304.1 KEGG: cce:Ccel_3089 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 245825 12419913 Clo1313_0221 Clostridium thermocellum DSM 1313 PpiC-type peptidyl-prolyl cis-trans isomerase YP_005686766.1 244731 D 637887 CDS YP_005686767.1 385777602 12419914 246085..246183 1 NC_017304.1 KEGG: geo:Geob_1163 transcriptional regulator, AraC family; AraC family transcriptional regulator 246183 12419914 Clo1313_0222 Clostridium thermocellum DSM 1313 AraC family transcriptional regulator YP_005686767.1 246085 D 637887 CDS YP_005686768.1 385777603 12419915 246162..246776 1 NC_017304.1 KEGG: geo:Geob_1163 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 246776 12419915 Clo1313_0223 Clostridium thermocellum DSM 1313 AraC family transcriptional regulator YP_005686768.1 246162 D 637887 CDS YP_005686769.1 385777604 12419916 246886..247320 1 NC_017304.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: geo:Geob_1162 pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 247320 12419916 Clo1313_0224 Clostridium thermocellum DSM 1313 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_005686769.1 246886 D 637887 CDS YP_005686770.1 385777605 12419917 complement(247623..249161) 1 NC_017304.1 KEGG: cdf:CD1499 putative membrane protein (virulence factor (MviN) homologue); TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 249161 12419917 Clo1313_0225 Clostridium thermocellum DSM 1313 integral membrane protein MviN YP_005686770.1 247623 R 637887 CDS YP_005686771.1 385777606 12419918 complement(249184..250308) 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: tye:THEYE_A0425 glycosyl transferase, group 1; group 1 glycosyl transferase 250308 12419918 Clo1313_0226 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005686771.1 249184 R 637887 CDS YP_005686772.1 385777607 12419919 complement(250259..251545) 1 NC_017304.1 PFAM: O-antigen polymerase; KEGG: nam:NAMH_1715 O-antigen polymerase family; O-antigen polymerase 251545 12419919 Clo1313_0227 Clostridium thermocellum DSM 1313 O-antigen polymerase YP_005686772.1 250259 R 637887 CDS YP_005686773.1 385777608 12419920 complement(251590..252282) 1 NC_017304.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: tnp:Tnap_0416 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 252282 12419920 Clo1313_0228 Clostridium thermocellum DSM 1313 acylneuraminate cytidylyltransferase YP_005686773.1 251590 R 637887 CDS YP_005686774.1 385777609 12419921 complement(252279..253454) 1 NC_017304.1 TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; KEGG: hor:Hore_16940 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase 253454 12419921 Clo1313_0229 Clostridium thermocellum DSM 1313 UDP-N-acetyl-D-glucosamine 2-epimerase YP_005686774.1 252279 R 637887 CDS YP_005686775.1 385777610 12419922 complement(253451..254443) 1 NC_017304.1 TIGRFAM: N-acetylneuraminate synthase; KEGG: pmx:PERMA_1627 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; N-acetylneuraminate synthase 254443 12419922 Clo1313_0230 Clostridium thermocellum DSM 1313 N-acetylneuraminate synthase YP_005686775.1 253451 R 637887 CDS YP_005686776.1 385777611 12419923 complement(254440..255084) 1 NC_017304.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: ckr:CKR_2187 hypothetical protein; sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 255084 12419923 Clo1313_0231 Clostridium thermocellum DSM 1313 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family YP_005686776.1 254440 R 637887 CDS YP_005686777.1 385777612 12419924 complement(255077..256123) 1 NC_017304.1 PFAM: Nucleotidyl transferase; CBS domain containing protein; KEGG: cbt:CLH_1461 nucleotidyl transferase; nucleotidyltransferase 256123 12419924 Clo1313_0232 Clostridium thermocellum DSM 1313 nucleotidyltransferase YP_005686777.1 255077 R 637887 CDS YP_005686778.1 385777613 12419925 complement(256128..257297) 1 NC_017304.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cbt:CLH_1450 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 257297 12419925 Clo1313_0233 Clostridium thermocellum DSM 1313 DegT/DnrJ/EryC1/StrS aminotransferase YP_005686778.1 256128 R 637887 CDS YP_005686779.1 385777614 12419926 complement(257313..258293) 1 NC_017304.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cbt:CLH_1449 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 258293 12419926 Clo1313_0234 Clostridium thermocellum DSM 1313 NAD-dependent epimerase/dehydratase YP_005686779.1 257313 R 637887 CDS YP_005686780.1 385777615 12419927 complement(258308..259525) 1 NC_017304.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: syg:sync_0184 hypothetical protein; capsular polysaccharide biosynthesis protein 259525 12419927 Clo1313_0235 Clostridium thermocellum DSM 1313 capsular polysaccharide biosynthesis protein YP_005686780.1 258308 R 637887 CDS YP_005686781.1 385777616 12419928 complement(259528..260454) 1 NC_017304.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: pmo:Pmob_1700 carbamoyl-phosphate synthase, large subunit; ATPase 260454 12419928 Clo1313_0236 Clostridium thermocellum DSM 1313 ATPase YP_005686781.1 259528 R 637887 CDS YP_005686782.1 385777617 12419929 complement(260471..261079) 1 NC_017304.1 PFAM: sugar transferase; KEGG: dtu:Dtur_0890 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; sugar transferase 261079 12419929 Clo1313_0237 Clostridium thermocellum DSM 1313 sugar transferase YP_005686782.1 260471 R 637887 CDS YP_005686783.1 385777618 12419930 complement(261091..261918) 1 NC_017304.1 PFAM: HpcH/HpaI aldolase; KEGG: mvn:Mevan_0407 HpcH/HpaI aldolase; HpcH/HpaI aldolase 261918 12419930 Clo1313_0238 Clostridium thermocellum DSM 1313 HpcH/HpaI aldolase YP_005686783.1 261091 R 637887 CDS YP_005686784.1 385777619 12419931 complement(262134..263957) 1 NC_017304.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: cbf:CLI_3168 exopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 263957 12419931 Clo1313_0239 Clostridium thermocellum DSM 1313 polysaccharide biosynthesis protein CapD YP_005686784.1 262134 R 637887 CDS YP_005686785.1 385777620 12419932 264265..264597 1 NC_017304.1 KEGG: cbk:CLL_A0963 hypothetical protein; hypothetical protein 264597 12419932 Clo1313_0240 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686785.1 264265 D 637887 CDS YP_005686786.1 385777621 12419933 264762..265433 1 NC_017304.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: dae:Dtox_4108 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 265433 12419933 Clo1313_0241 Clostridium thermocellum DSM 1313 lipopolysaccharide biosynthesis protein YP_005686786.1 264762 D 637887 CDS YP_005686787.1 385777622 12419934 265446..266195 1 NC_017304.1 KEGG: clj:CLJU_c05160 putative exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide family protein 266195 12419934 Clo1313_0242 Clostridium thermocellum DSM 1313 capsular exopolysaccharide family protein YP_005686787.1 265446 D 637887 CDS YP_005686788.1 385777623 12419935 266188..266898 1 NC_017304.1 KEGG: sca:Sca_0832 putative phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis); PFAM: PHP domain protein; protein-tyrosine-phosphatase 266898 12419935 Clo1313_0243 Clostridium thermocellum DSM 1313 protein-tyrosine-phosphatase YP_005686788.1 266188 D 637887 CDS YP_005686789.1 385777624 12419936 267234..267785 1 NC_017304.1 KEGG: cce:Ccel_3088 transcriptional regulator, AbrB family; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; stage V sporulation protein T 267785 12419936 Clo1313_0244 Clostridium thermocellum DSM 1313 stage V sporulation protein T YP_005686789.1 267234 D 637887 CDS YP_005686790.1 385777625 12419937 268016..268801 1 NC_017304.1 KEGG: cce:Ccel_3086 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein 268801 12419937 Clo1313_0245 Clostridium thermocellum DSM 1313 MazG family protein YP_005686790.1 268016 D 637887 CDS YP_005686791.1 385777626 12419938 268952..269227 1 NC_017304.1 KEGG: tpd:Teth39_0249 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein 269227 12419938 Clo1313_0246 Clostridium thermocellum DSM 1313 histone family protein DNA-binding protein YP_005686791.1 268952 D 637887 CDS YP_005686792.1 385777627 12419939 269337..269576 1 NC_017304.1 KEGG: cce:Ccel_3084 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 269576 12419939 Clo1313_0247 Clostridium thermocellum DSM 1313 RNA-binding S4 domain-containing protein YP_005686792.1 269337 D 637887 CDS YP_005686793.1 385777628 12419940 269741..270031 1 NC_017304.1 KEGG: cce:Ccel_3083 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; sporulation protein YabP 270031 12419940 Clo1313_0248 Clostridium thermocellum DSM 1313 sporulation protein YabP YP_005686793.1 269741 D 637887 CDS YP_005686794.1 385777629 12419941 270046..270555 1 NC_017304.1 KEGG: cce:Ccel_3082 hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like; spore cortex biosynthesis protein YabQ 270555 12419941 Clo1313_0249 Clostridium thermocellum DSM 1313 spore cortex biosynthesis protein YabQ YP_005686794.1 270046 D 637887 CDS YP_005686795.1 385777630 12419942 270681..270962 1 NC_017304.1 PFAM: Septum formation initiator; KEGG: cce:Ccel_3081 septum formation initiator; septum formation initiator 270962 12419942 Clo1313_0250 Clostridium thermocellum DSM 1313 septum formation initiator YP_005686795.1 270681 D 637887 CDS YP_005686796.1 385777631 12419943 271081..271503 1 NC_017304.1 PFAM: RNA binding S1 domain protein; KEGG: cce:Ccel_3080 RNA binding S1 domain protein; RNA binding S1 domain-containing protein 271503 12419943 Clo1313_0251 Clostridium thermocellum DSM 1313 RNA binding S1 domain-containing protein YP_005686796.1 271081 D 637887 CDS YP_005686797.1 385777632 12419946 272225..273481 1 NC_017304.1 KEGG: cce:Ccel_2179 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 273481 12419946 Clo1313_0252 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005686797.1 272225 D 637887 CDS YP_005686798.1 385777633 12419947 273791..275491 1 NC_017304.1 PFAM: ABC-1 domain-containing protein; KEGG: ckr:CKR_3068 hypothetical protein; ABC-1 domain-containing protein 275491 12419947 Clo1313_0253 Clostridium thermocellum DSM 1313 ABC-1 domain-containing protein YP_005686798.1 273791 D 637887 CDS YP_005686799.1 385777634 12419948 complement(275492..275896) 1 NC_017304.1 KEGG: amt:Amet_0451 Zn-finger containing protein; Zn-finger containing protein 275896 12419948 Clo1313_0254 Clostridium thermocellum DSM 1313 Zn-finger containing protein YP_005686799.1 275492 R 637887 CDS YP_005686800.1 385777635 12419949 complement(275962..278556) 1 NC_017304.1 KEGG: cpy:Cphy_0632 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase 278556 12419949 Clo1313_0255 Clostridium thermocellum DSM 1313 P-type HAD superfamily ATPase YP_005686800.1 275962 R 637887 CDS YP_005686801.1 385777636 12419950 278837..279397 1 NC_017304.1 PFAM: regulatory protein TetR; KEGG: bse:Bsel_0940 transcriptional regulator, TetR family; regulatory protein TetR 279397 12419950 Clo1313_0256 Clostridium thermocellum DSM 1313 regulatory protein TetR YP_005686801.1 278837 D 637887 CDS YP_005686802.1 385777637 12419952 281749..282219 1 NC_017304.1 KEGG: cby:CLM_0713 putative lipoprotein; hypothetical protein 282219 12419952 Clo1313_0258 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686802.1 281749 D 637887 CDS YP_005686803.1 385777638 12419953 282446..282586 1 NC_017304.1 hypothetical protein 282586 12419953 Clo1313_0259 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686803.1 282446 D 637887 CDS YP_005686804.1 385777639 12419954 283500..283757 1 NC_017304.1 KEGG: sli:Slin_3195 hydrolase; hydrolase 283757 12419954 Clo1313_0260 Clostridium thermocellum DSM 1313 hydrolase YP_005686804.1 283500 D 637887 CDS YP_005686805.1 385777640 12419955 284073..284234 1 NC_017304.1 KEGG: sdn:Sden_1920 hypothetical protein; hypothetical protein 284234 12419955 Clo1313_0261 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686805.1 284073 D 637887 CDS YP_005686806.1 385777641 12419956 284316..284585 1 NC_017304.1 PFAM: Ribosomal protein L7/L12; KEGG: cbt:CLH_1966 hypothetical protein; 50S ribosomal protein L7/L12 284585 12419956 Clo1313_0262 Clostridium thermocellum DSM 1313 50S ribosomal protein L7/L12 YP_005686806.1 284316 D 637887 CDS YP_005686807.1 385777642 12419958 285276..285698 1 NC_017304.1 KEGG: btl:BALH_1793 hypothetical protein; hypothetical protein 285698 12419958 Clo1313_0264 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686807.1 285276 D 637887 CDS YP_005686808.1 385777643 12419959 285953..286621 1 NC_017304.1 KEGG: fno:Fnod_1549 major facilitator transporter; hypothetical protein 286621 12419959 Clo1313_0265 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686808.1 285953 D 637887 CDS YP_005686809.1 385777644 12419960 286834..288264 1 NC_017304.1 PFAM: GumN family protein; KEGG: lsp:Bsph_4539 hypothetical protein; GumN family protein 288264 12419960 Clo1313_0266 Clostridium thermocellum DSM 1313 GumN family protein YP_005686809.1 286834 D 637887 CDS YP_005686810.1 385777645 12419962 complement(289538..290071) 1 NC_017304.1 KEGG: cbk:CLL_A1984 hypothetical protein; hypothetical protein 290071 12419962 Clo1313_0268 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686810.1 289538 R 637887 CDS YP_005686811.1 385777646 12419963 complement(290076..291161) 1 NC_017304.1 KEGG: cpi:Cpin_0594 hypothetical protein; hypothetical protein 291161 12419963 Clo1313_0269 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686811.1 290076 R 637887 CDS YP_005686812.1 385777647 12419964 complement(291344..293581) 1 NC_017304.1 KEGG: cpy:Cphy_1188 peptidase S41; PFAM: peptidase S41; Tetratricopeptide TPR_1 repeat-containing protein; SMART: peptidase S41; Tetratricopeptide repeat; peptidase S41 293581 12419964 Clo1313_0270 Clostridium thermocellum DSM 1313 peptidase S41 YP_005686812.1 291344 R 637887 CDS YP_005686813.1 385777648 12419968 294611..297007 1 NC_017304.1 SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: cce:Ccel_2986 stage II sporulation protein E, protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; stage II sporulation protein E 297007 12419968 Clo1313_0271 Clostridium thermocellum DSM 1313 stage II sporulation protein E YP_005686813.1 294611 D 637887 CDS YP_005686814.1 385777649 12419969 297081..297422 1 NC_017304.1 KEGG: cce:Ccel_2985 hypothetical protein; hypothetical protein 297422 12419969 Clo1313_0272 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686814.1 297081 D 637887 CDS YP_005686815.1 385777650 12419970 297519..298202 1 NC_017304.1 KEGG: cce:Ccel_2984 hypothetical protein; hypothetical protein 298202 12419970 Clo1313_0273 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686815.1 297519 D 637887 CDS YP_005686816.1 385777651 12419972 298548..299063 1 NC_017304.1 KEGG: cbf:CLI_2709 hypothetical protein; manually curated; PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 299063 12419972 Clo1313_0274 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005686816.1 298548 D 637887 CDS YP_005686817.1 385777652 12419973 299387..300355 1 NC_017304.1 manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: cce:Ccel_2942 TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; nifR3 family TIM-barrel protein 300355 12419973 Clo1313_0275 Clostridium thermocellum DSM 1313 nifR3 family TIM-barrel protein YP_005686817.1 299387 D 637887 CDS YP_005686818.1 385777653 12419974 300497..301600 1 NC_017304.1 KEGG: cno:NT01CX_1603 fimbrial assembly protein, putative; TIGRFAM: type IV pilus assembly protein PilM; PFAM: cell division protein FtsA; type IV pilus assembly protein PilM 301600 12419974 Clo1313_0276 Clostridium thermocellum DSM 1313 type IV pilus assembly protein PilM YP_005686818.1 300497 D 637887 CDS YP_005686819.1 385777654 12419975 301711..302214 1 NC_017304.1 PFAM: thioesterase superfamily protein; KEGG: tjr:TherJR_0944 thioesterase superfamily protein; thioesterase superfamily protein 302214 12419975 Clo1313_0277 Clostridium thermocellum DSM 1313 thioesterase superfamily protein YP_005686819.1 301711 D 637887 CDS YP_005686820.1 385777655 12419976 302351..303904 1 NC_017304.1 KEGG: cce:Ccel_2939 stage V sporulation protein B; TIGRFAM: stage V sporulation protein B; PFAM: polysaccharide biosynthesis protein; stage V sporulation protein B 303904 12419976 Clo1313_0278 Clostridium thermocellum DSM 1313 stage V sporulation protein B YP_005686820.1 302351 D 637887 CDS YP_005686821.1 385777656 12419977 304439..304609 1 NC_017304.1 KEGG: pfh:PFHG_04637 conserved hypothetical protein; hypothetical protein 304609 12419977 Clo1313_0279 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686821.1 304439 D 637887 CDS YP_005686822.1 385777657 12419978 complement(304709..306205) 1 NC_017304.1 KEGG: amt:Amet_3155 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; DeoR family transcriptional regulator 306205 12419978 Clo1313_0280 Clostridium thermocellum DSM 1313 DeoR family transcriptional regulator YP_005686822.1 304709 R 637887 CDS YP_005686823.1 385777658 12419979 306487..307392 1 NC_017304.1 PFAM: UbiA prenyltransferase; KEGG: tjr:TherJR_2839 UbiA prenyltransferase; UbiA prenyltransferase 307392 12419979 Clo1313_0281 Clostridium thermocellum DSM 1313 UbiA prenyltransferase YP_005686823.1 306487 D 637887 CDS YP_005686824.1 385777659 12419980 307406..307942 1 NC_017304.1 KEGG: mac:MA2174 galactoside O-acetyltransferase; galactoside O-acetyltransferase 307942 12419980 Clo1313_0282 Clostridium thermocellum DSM 1313 galactoside O-acetyltransferase YP_005686824.1 307406 D 637887 CDS YP_005686825.1 385777660 12419981 307991..309094 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: hmo:HM1_1179 glycosyltransferase, group 1 family protein, putative; group 1 glycosyl transferase 309094 12419981 Clo1313_0283 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005686825.1 307991 D 637887 CDS YP_005686826.1 385777661 12419982 309142..309639 1 NC_017304.1 KEGG: sth:STH1099 hypothetical protein; hypothetical protein 309639 12419982 Clo1313_0284 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686826.1 309142 D 637887 CDS YP_005686827.1 385777662 12419983 309646..311244 1 NC_017304.1 PFAM: O-antigen polymerase; KEGG: dae:Dtox_4116 O-antigen polymerase; O-antigen polymerase 311244 12419983 Clo1313_0285 Clostridium thermocellum DSM 1313 O-antigen polymerase YP_005686827.1 309646 D 637887 CDS YP_005686828.1 385777663 12419984 311359..311991 1 NC_017304.1 KEGG: cce:Ccel_2928 hypothetical protein; hypothetical protein 311991 12419984 Clo1313_0286 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686828.1 311359 D 637887 CDS YP_005686829.1 385777664 12419985 312033..313580 1 NC_017304.1 KEGG: tjr:TherJR_0655 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein; carbohydrate kinase 313580 12419985 Clo1313_0287 Clostridium thermocellum DSM 1313 carbohydrate kinase YP_005686829.1 312033 D 637887 CDS YP_005686830.1 385777665 12419986 313640..314815 1 NC_017304.1 TIGRFAM: alanine racemase; KEGG: cce:Ccel_2926 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 314815 12419986 Clo1313_0288 Clostridium thermocellum DSM 1313 alanine racemase YP_005686830.1 313640 D 637887 CDS YP_005686831.1 385777666 12419987 315327..315614 1 NC_017304.1 KEGG: cce:Ccel_2925 putative transcriptional regulator, CopG family; CopG family transcriptional regulator 315614 12419987 Clo1313_0289 Clostridium thermocellum DSM 1313 CopG family transcriptional regulator YP_005686831.1 315327 D 637887 CDS YP_005686832.1 385777667 12419988 315604..315954 1 NC_017304.1 PFAM: PemK family protein; KEGG: tte:TTE2166 growth inhibitor; transcriptional modulator of MazE/toxin MazF 315954 12419988 Clo1313_0290 Clostridium thermocellum DSM 1313 transcriptional modulator of MazE/toxin MazF YP_005686832.1 315604 D 637887 CDS YP_005686833.1 385777668 12419989 315975..316472 1 NC_017304.1 KEGG: amt:Amet_4142 hypothetical protein; hypothetical protein 316472 12419989 Clo1313_0291 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686833.1 315975 D 637887 CDS YP_005686834.1 385777669 12419990 complement(316738..317487) 1 NC_017304.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: cce:Ccel_2921 glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 317487 12419990 Clo1313_0292 Clostridium thermocellum DSM 1313 WecB/TagA/CpsF family glycosyl transferase YP_005686834.1 316738 R 637887 CDS YP_005686835.1 385777670 12419991 complement(317518..319755) 1 NC_017304.1 KEGG: cce:Ccel_2883 polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: glycosyl transferase group 1; polysaccharide pyruvyl transferase CsaB 319755 12419991 Clo1313_0293 Clostridium thermocellum DSM 1313 polysaccharide pyruvyl transferase CsaB YP_005686835.1 317518 R 637887 CDS YP_005686836.1 385777671 12419992 320081..320986 1 NC_017304.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: cce:Ccel_2920 protein of unknown function DUF161; hypothetical protein 320986 12419992 Clo1313_0294 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686836.1 320081 D 637887 CDS YP_005686837.1 385777672 12419993 321102..321947 1 NC_017304.1 PFAM: Transketolase domain-containing protein; KEGG: tjr:TherJR_2765 transketolase domain protein; transketolase 321947 12419993 Clo1313_0295 Clostridium thermocellum DSM 1313 transketolase YP_005686837.1 321102 D 637887 CDS YP_005686838.1 385777673 12419994 321949..322884 1 NC_017304.1 PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: cbt:CLH_3106 transketolase, pyridine binding domain; transketolase 322884 12419994 Clo1313_0296 Clostridium thermocellum DSM 1313 transketolase YP_005686838.1 321949 D 637887 CDS YP_005686839.1 385777674 12419995 323255..324364 1 NC_017304.1 KEGG: cce:Ccel_0295 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 324364 12419995 Clo1313_0297 Clostridium thermocellum DSM 1313 ABC transporter YP_005686839.1 323255 D 637887 CDS YP_005686840.1 385777675 12419996 324364..325086 1 NC_017304.1 KEGG: cce:Ccel_0296 ABC-2 type transporter; ABC transporter 325086 12419996 Clo1313_0298 Clostridium thermocellum DSM 1313 ABC transporter YP_005686840.1 324364 D 637887 CDS YP_005686841.1 385777676 12419997 325093..326514 1 NC_017304.1 PFAM: ABC-type uncharacterised transport system; KEGG: cce:Ccel_0297 hypothetical protein; ABC transporter 326514 12419997 Clo1313_0299 Clostridium thermocellum DSM 1313 ABC transporter YP_005686841.1 325093 D 637887 CDS YP_005686842.1 385777677 12419998 326511..327989 1 NC_017304.1 KEGG: cce:Ccel_0298 hypothetical protein; hypothetical protein 327989 12419998 Clo1313_0300 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686842.1 326511 D 637887 CDS YP_005686843.1 385777678 12419999 328067..329176 1 NC_017304.1 KEGG: cce:Ccel_0299 hypothetical protein; hypothetical protein 329176 12419999 Clo1313_0301 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686843.1 328067 D 637887 CDS YP_005686844.1 385777679 12420000 329257..330438 1 NC_017304.1 KEGG: cce:Ccel_0300 hypothetical protein; hypothetical protein 330438 12420000 Clo1313_0302 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686844.1 329257 D 637887 CDS YP_005686845.1 385777680 12420001 330456..331175 1 NC_017304.1 PFAM: Colicin V production protein; KEGG: cce:Ccel_0301 hypothetical protein; colicin V production protein 331175 12420001 Clo1313_0303 Clostridium thermocellum DSM 1313 colicin V production protein YP_005686845.1 330456 D 637887 CDS YP_005686846.1 385777681 12420002 331447..333111 1 NC_017304.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: cce:Ccel_0302 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 333111 12420002 Clo1313_0304 Clostridium thermocellum DSM 1313 dihydroxy-acid dehydratase YP_005686846.1 331447 D 637887 CDS YP_005686847.1 385777682 12420003 333180..334847 1 NC_017304.1 KEGG: cce:Ccel_0303 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit 334847 12420003 Clo1313_0305 Clostridium thermocellum DSM 1313 acetolactate synthase large subunit YP_005686847.1 333180 D 637887 CDS YP_005686848.1 385777683 12420004 335122..335271 1 NC_017304.1 KEGG: cac:CA_C3151 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 335271 12420004 Clo1313_0306 Clostridium thermocellum DSM 1313 50S ribosomal protein L33 YP_005686848.1 335122 D 637887 CDS YP_005686849.1 385777684 12420005 335360..335602 1 NC_017304.1 KEGG: cce:Ccel_0306 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE 335602 12420005 Clo1313_0307 Clostridium thermocellum DSM 1313 preprotein translocase subunit SecE YP_005686849.1 335360 D 637887 CDS YP_005686850.1 385777685 12420006 335658..336191 1 NC_017304.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: cce:Ccel_0307 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein; NusG antitermination factor 336191 12420006 Clo1313_0308 Clostridium thermocellum DSM 1313 NusG antitermination factor YP_005686850.1 335658 D 637887 CDS YP_005686851.1 385777686 12420007 336333..336758 1 NC_017304.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: cce:Ccel_0308 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 336758 12420007 Clo1313_0309 Clostridium thermocellum DSM 1313 50S ribosomal protein L11 YP_005686851.1 336333 D 637887 CDS YP_005686852.1 385777687 12420008 336859..337554 1 NC_017304.1 KEGG: cce:Ccel_0309 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 337554 12420008 Clo1313_0310 Clostridium thermocellum DSM 1313 50S ribosomal protein L1 YP_005686852.1 336859 D 637887 CDS YP_005686853.1 385777688 12420009 337827..338363 1 NC_017304.1 PFAM: ribosomal protein L10; KEGG: cce:Ccel_0310 ribosomal protein L10; 50S ribosomal protein L10 338363 12420009 Clo1313_0311 Clostridium thermocellum DSM 1313 50S ribosomal protein L10 YP_005686853.1 337827 D 637887 CDS YP_005686854.1 385777689 12420010 338451..338840 1 NC_017304.1 KEGG: cce:Ccel_0311 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 338840 12420010 Clo1313_0312 Clostridium thermocellum DSM 1313 50S ribosomal protein L7/L12 YP_005686854.1 338451 D 637887 CDS YP_005686855.1 385777690 12420011 339339..343091 1 NC_017304.1 KEGG: cce:Ccel_0312 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; DNA-directed RNA polymerase subunit beta 343091 12420011 Clo1313_0313 Clostridium thermocellum DSM 1313 DNA-directed RNA polymerase subunit beta YP_005686855.1 339339 D 637887 CDS YP_005686856.1 385777691 12420012 343109..346606 1 NC_017304.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: cce:Ccel_0313 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 346606 12420012 Clo1313_0314 Clostridium thermocellum DSM 1313 DNA-directed RNA polymerase subunit beta' YP_005686856.1 343109 D 637887 CDS YP_005686857.1 385777692 12420013 346748..346987 1 NC_017304.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cce:Ccel_0314 ribosomal protein L7Ae/L30e/S12e/Gadd45; ribosomal protein L7Ae/L30e/S12e/Gadd45 346987 12420013 Clo1313_0315 Clostridium thermocellum DSM 1313 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_005686857.1 346748 D 637887 CDS YP_005686858.1 385777693 12420014 347075..347503 1 NC_017304.1 KEGG: cce:Ccel_0315 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 347503 12420014 Clo1313_0316 Clostridium thermocellum DSM 1313 30S ribosomal protein S12 YP_005686858.1 347075 D 637887 CDS YP_005686859.1 385777694 12420015 347683..348153 1 NC_017304.1 KEGG: tjr:TherJR_0292 ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 348153 12420015 Clo1313_0317 Clostridium thermocellum DSM 1313 30S ribosomal protein S7 YP_005686859.1 347683 D 637887 CDS YP_005686860.1 385777695 12420016 348226..350319 1 NC_017304.1 KEGG: cce:Ccel_0317 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 350319 12420016 Clo1313_0318 Clostridium thermocellum DSM 1313 translation elongation factor G YP_005686860.1 348226 D 637887 CDS YP_005686861.1 385777696 12420017 350435..351637 1 NC_017304.1 KEGG: cce:Ccel_0318 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 351637 12420017 Clo1313_0319 Clostridium thermocellum DSM 1313 translation elongation factor Tu YP_005686861.1 350435 D 637887 CDS YP_005686862.1 385777697 12420018 351943..352497 1 NC_017304.1 KEGG: cce:Ccel_0803 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 352497 12420018 Clo1313_0320 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005686862.1 351943 D 637887 CDS YP_005686863.1 385777698 12420019 352494..353096 1 NC_017304.1 KEGG: cce:Ccel_0804 hypothetical protein; hypothetical protein 353096 12420019 Clo1313_0321 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686863.1 352494 D 637887 CDS YP_005686864.1 385777699 12420020 353207..353581 1 NC_017304.1 KEGG: cce:Ccel_0130 hypothetical protein; hypothetical protein 353581 12420020 Clo1313_0322 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686864.1 353207 D 637887 CDS YP_005686865.1 385777700 12420021 353618..354457 1 NC_017304.1 PFAM: VanW family protein; KEGG: slp:Slip_1010 VanW family protein; VanW family protein 354457 12420021 Clo1313_0323 Clostridium thermocellum DSM 1313 VanW family protein YP_005686865.1 353618 D 637887 CDS YP_005686866.1 385777701 12420022 354633..354902 1 NC_017304.1 KEGG: cce:Ccel_0806 phosphocarrier, HPr family; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 354902 12420022 Clo1313_0324 Clostridium thermocellum DSM 1313 phosphotransferase system, phosphocarrier protein HPr YP_005686866.1 354633 D 637887 CDS YP_005686867.1 385777702 12420023 354906..356660 1 NC_017304.1 KEGG: tte:TTE2334 phosphoenolpyruvate-protein kinase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoenolpyruvate-protein phosphotransferase 356660 12420023 Clo1313_0325 Clostridium thermocellum DSM 1313 phosphoenolpyruvate-protein phosphotransferase YP_005686867.1 354906 D 637887 CDS YP_005686868.1 385777703 12420024 356666..358543 1 NC_017304.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: cce:Ccel_0807 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 358543 12420024 Clo1313_0326 Clostridium thermocellum DSM 1313 excinuclease ABC subunit C YP_005686868.1 356666 D 637887 CDS YP_005686869.1 385777704 12420025 358550..359257 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: cce:Ccel_0808 metallophosphoesterase; metallophosphoesterase 359257 12420025 Clo1313_0327 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005686869.1 358550 D 637887 CDS YP_005686870.1 385777705 12420026 359475..360761 1 NC_017304.1 KEGG: cce:Ccel_0809 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type; trigger factor 360761 12420026 Clo1313_0328 Clostridium thermocellum DSM 1313 trigger factor YP_005686870.1 359475 D 637887 CDS YP_005686871.1 385777706 12420027 360831..361415 1 NC_017304.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: cce:Ccel_0810 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 361415 12420027 Clo1313_0329 Clostridium thermocellum DSM 1313 ATP-dependent Clp protease, proteolytic subunit ClpP YP_005686871.1 360831 D 637887 CDS YP_005686872.1 385777707 12420028 361429..362724 1 NC_017304.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: cce:Ccel_0811 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 362724 12420028 Clo1313_0330 Clostridium thermocellum DSM 1313 ATP-dependent Clp protease ATP-binding subunit ClpX YP_005686872.1 361429 D 637887 CDS YP_005686873.1 385777708 12420029 362959..364635 1 NC_017304.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent protease LonB; KEGG: cce:Ccel_0812 sigma 54 interacting domain protein; PFAM: AAA ATPase central domain protein; sigma-54 interacting domain-containing protein 364635 12420029 Clo1313_0331 Clostridium thermocellum DSM 1313 sigma-54 interacting domain-containing protein YP_005686873.1 362959 D 637887 CDS YP_005686874.1 385777709 12420030 364847..365866 1 NC_017304.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: cce:Ccel_0814 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 365866 12420030 Clo1313_0332 Clostridium thermocellum DSM 1313 glycoprotease family metalloendopeptidase YP_005686874.1 364847 D 637887 CDS YP_005686875.1 385777710 12420031 complement(366580..367266) 1 NC_017304.1 PFAM: Lytic transglycosylase catalytic; KEGG: cce:Ccel_0815 lytic transglycosylase catalytic; lytic transglycosylase 367266 12420031 Clo1313_0333 Clostridium thermocellum DSM 1313 lytic transglycosylase YP_005686875.1 366580 R 637887 CDS YP_005686876.1 385777711 12420032 complement(367483..367806) 1 NC_017304.1 KEGG: cce:Ccel_0816 hypothetical protein; hypothetical protein 367806 12420032 Clo1313_0334 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686876.1 367483 R 637887 CDS YP_005686877.1 385777712 12420033 368143..368613 1 NC_017304.1 PFAM: protein of unknown function DUF402; KEGG: cce:Ccel_0817 protein of unknown function DUF402; hypothetical protein 368613 12420033 Clo1313_0335 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686877.1 368143 D 637887 CDS YP_005686878.1 385777713 12420034 368673..369521 1 NC_017304.1 KEGG: cce:Ccel_0818 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 369521 12420034 Clo1313_0336 Clostridium thermocellum DSM 1313 PHP domain-containing protein YP_005686878.1 368673 D 637887 CDS YP_005686879.1 385777714 12420035 369701..370165 1 NC_017304.1 KEGG: cce:Ccel_0819 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein 370165 12420035 Clo1313_0337 Clostridium thermocellum DSM 1313 SsrA-binding protein YP_005686879.1 369701 D 637887 CDS YP_005686880.1 385777715 12420037 370686..370865 1 NC_017304.1 KEGG: bpf:BpOF4_17620 hypothetical protein; hypothetical protein 370865 12420037 Clo1313_0338 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686880.1 370686 D 637887 CDS YP_005686881.1 385777716 12420038 371586..371978 1 NC_017304.1 KEGG: lwe:lwe1722 hypothetical protein; hypothetical protein 371978 12420038 Clo1313_0339 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686881.1 371586 D 637887 CDS YP_005686882.1 385777717 12420039 372179..372352 1 NC_017304.1 KEGG: rno:294429 RAN binding protein 2; hypothetical protein 372352 12420039 Clo1313_0340 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686882.1 372179 D 637887 CDS YP_005686883.1 385777718 12420040 372739..374070 1 NC_017304.1 KEGG: ctc:CTC01364 hypothetical protein; hypothetical protein 374070 12420040 Clo1313_0341 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686883.1 372739 D 637887 CDS YP_005686884.1 385777719 12420041 374081..374293 1 NC_017304.1 KEGG: dhd:Dhaf_1136 hypothetical protein; hypothetical protein 374293 12420041 Clo1313_0342 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686884.1 374081 D 637887 CDS YP_005686885.1 385777720 12420042 374388..375104 1 NC_017304.1 KEGG: amt:Amet_3852 beta-lactamase domain-containing protein; beta-lactamase domain-containing protein 375104 12420042 Clo1313_0343 Clostridium thermocellum DSM 1313 beta-lactamase domain-containing protein YP_005686885.1 374388 D 637887 CDS YP_005686886.1 385777721 12420043 375143..375964 1 NC_017304.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: amr:AM1_0005 ADP-ribosylglycohydrolase; ADP-ribosylation/Crystallin J1 375964 12420043 Clo1313_0344 Clostridium thermocellum DSM 1313 ADP-ribosylation/Crystallin J1 YP_005686886.1 375143 D 637887 CDS YP_005686887.1 385777722 12420045 376800..378416 1 NC_017304.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: fma:FMG_0030 potassium/proton antiporter; sodium/hydrogen exchanger 378416 12420045 Clo1313_0346 Clostridium thermocellum DSM 1313 sodium/hydrogen exchanger YP_005686887.1 376800 D 637887 CDS YP_005686888.1 385777723 12420046 378546..378674 1 NC_017304.1 PFAM: DNA polymerase beta domain protein region; KEGG: smb:smi_1712 nucleotidyltransferase; DNA polymerase beta domain-containing protein 378674 12420046 Clo1313_0347 Clostridium thermocellum DSM 1313 DNA polymerase beta domain-containing protein YP_005686888.1 378546 D 637887 CDS YP_005686889.1 385777724 12420047 378820..379698 1 NC_017304.1 KEGG: pth:PTH_1521 hypothetical protein; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 379698 12420047 Clo1313_0348 Clostridium thermocellum DSM 1313 AraC family transcriptional regulator YP_005686889.1 378820 D 637887 CDS YP_005686890.1 385777725 12420048 380195..383080 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Dockerin type 1; type 3a cellulose-binding domain protein; KEGG: cce:Ccel_1648 glycoside hydrolase family 9; glycoside hydrolase 383080 12420048 Clo1313_0349 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686890.1 380195 D 637887 CDS YP_005686891.1 385777726 12420049 383245..385368 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: cce:Ccel_1249 glycoside hydrolase family 9; glycoside hydrolase 385368 12420049 Clo1313_0350 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686891.1 383245 D 637887 CDS YP_005686892.1 385777727 12420050 385818..387155 1 NC_017304.1 manually curated; KEGG: cbe:Cbei_3559 transcriptional regulator-like protein; transcriptional regulator-like protein 387155 12420050 Clo1313_0351 Clostridium thermocellum DSM 1313 transcriptional regulator-like protein YP_005686892.1 385818 D 637887 CDS YP_005686893.1 385777728 12420051 387139..388191 1 NC_017304.1 manually curated; KEGG: cbe:Cbei_3558 hypothetical protein; hypothetical protein 388191 12420051 Clo1313_0352 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686893.1 387139 D 637887 CDS YP_005686894.1 385777729 12420052 388646..390109 1 NC_017304.1 KEGG: cbe:Cbei_3557 TROVE domain-containing protein; manually curated; PFAM: TROVE domain-containing protein; TROVE domain-containing protein 390109 12420052 Clo1313_0353 Clostridium thermocellum DSM 1313 TROVE domain-containing protein YP_005686894.1 388646 D 637887 CDS YP_005686895.1 385777730 12420053 390121..391701 1 NC_017304.1 KEGG: bbe:BBR47_03130 hypothetical protein; hypothetical protein 391701 12420053 Clo1313_0354 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686895.1 390121 D 637887 CDS YP_005686896.1 385777731 12420054 391714..391953 1 NC_017304.1 KEGG: cai:Caci_3518 hypothetical protein; hypothetical protein 391953 12420054 Clo1313_0355 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686896.1 391714 D 637887 CDS YP_005686897.1 385777732 12420055 392079..393476 1 NC_017304.1 PFAM: Methyltransferase type 12; KEGG: ana:alr3730 hypothetical protein; type 12 methyltransferase 393476 12420055 Clo1313_0356 Clostridium thermocellum DSM 1313 type 12 methyltransferase YP_005686897.1 392079 D 637887 CDS YP_005686898.1 385777733 12420056 393473..396085 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: aba:Acid345_1977 metallophosphoesterase; metallophosphoesterase 396085 12420056 Clo1313_0357 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005686898.1 393473 D 637887 CDS YP_005686899.1 385777734 12420057 complement(396201..396902) 1 NC_017304.1 KEGG: aoe:Clos_2425 hypothetical protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; iron-sulfur cluster repair di-iron protein 396902 12420057 Clo1313_0358 Clostridium thermocellum DSM 1313 iron-sulfur cluster repair di-iron protein YP_005686899.1 396201 R 637887 CDS YP_005686900.1 385777735 12420058 complement(396925..398154) 1 NC_017304.1 KEGG: amt:Amet_3723 beta-lactamase domain-containing protein; PFAM: flavodoxin/nitric oxide synthase; SMART: beta-lactamase domain protein; flavodoxin/nitric oxide synthase 398154 12420058 Clo1313_0359 Clostridium thermocellum DSM 1313 flavodoxin/nitric oxide synthase YP_005686900.1 396925 R 637887 CDS YP_005686901.1 385777736 12420059 complement(398310..399008) 1 NC_017304.1 KEGG: aoe:Clos_2178 Crp/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; CarD family transcriptional regulator 399008 12420059 Clo1313_0360 Clostridium thermocellum DSM 1313 CarD family transcriptional regulator YP_005686901.1 398310 R 637887 CDS YP_005686902.1 385777737 12420060 399249..399869 1 NC_017304.1 KEGG: pph:Ppha_0457 rod shape-determining protein RodA; hypothetical protein 399869 12420060 Clo1313_0361 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686902.1 399249 D 637887 CDS YP_005686903.1 385777738 12420061 399931..400050 1 NC_017304.1 hypothetical protein 400050 12420061 Clo1313_0362 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686903.1 399931 D 637887 CDS YP_005686904.1 385777739 12420062 400142..400285 1 NC_017304.1 KEGG: ctc:CTC00666 hypothetical protein; hypothetical protein 400285 12420062 Clo1313_0363 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686904.1 400142 D 637887 CDS YP_005686905.1 385777740 12420063 400750..401454 1 NC_017304.1 KEGG: bhy:BHWA1_02422 nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 401454 12420063 Clo1313_0364 Clostridium thermocellum DSM 1313 nicotinamide mononucleotide transporter PnuC YP_005686905.1 400750 D 637887 CDS YP_005686906.1 385777741 12420064 401447..402469 1 NC_017304.1 KEGG: bhy:BHWA1_02421 nicotinamide-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; cytidyltransferase 402469 12420064 Clo1313_0365 Clostridium thermocellum DSM 1313 cytidyltransferase YP_005686906.1 401447 D 637887 CDS YP_005686907.1 385777742 12420065 402570..402956 1 NC_017304.1 KEGG: shi:Shel_21970 hypothetical protein; hypothetical protein 402956 12420065 Clo1313_0366 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686907.1 402570 D 637887 CDS YP_005686908.1 385777743 12420066 403020..403205 1 NC_017304.1 hypothetical protein 403205 12420066 Clo1313_0367 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686908.1 403020 D 637887 CDS YP_005686909.1 385777744 12420067 403407..403748 1 NC_017304.1 PFAM: Domain of unknown function DUF1801; KEGG: rci:RCIX1712 hypothetical protein; hypothetical protein 403748 12420067 Clo1313_0368 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686909.1 403407 D 637887 CDS YP_005686910.1 385777745 12420068 403860..404546 1 NC_017304.1 KEGG: cbk:CLL_A0963 hypothetical protein; hypothetical protein 404546 12420068 Clo1313_0369 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686910.1 403860 D 637887 CDS YP_005686911.1 385777746 12420069 404822..405562 1 NC_017304.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; S-layer domain-containing protein; KEGG: swo:Swol_1062 negative regulator of beta-lactamase expression-like protein; N-acetylmuramoyl-L-alanine amidase family protein 405562 12420069 Clo1313_0370 Clostridium thermocellum DSM 1313 N-acetylmuramoyl-L-alanine amidase family protein YP_005686911.1 404822 D 637887 CDS YP_005686912.1 385777747 12420070 405850..406011 1 NC_017304.1 PFAM: Protein of unknown function DUF2292; KEGG: clj:CLJU_c23500 hypothetical protein; hypothetical protein 406011 12420070 Clo1313_0371 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686912.1 405850 D 637887 CDS YP_005686913.1 385777748 12420071 406079..406744 1 NC_017304.1 PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: geo:Geob_2541 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 406744 12420071 Clo1313_0372 Clostridium thermocellum DSM 1313 cobalamin B12-binding domain-containing protein YP_005686913.1 406079 D 637887 CDS YP_005686914.1 385777749 12420072 406734..407852 1 NC_017304.1 KEGG: geo:Geob_2542 uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: Uroporphyrinogen decarboxylase (URO-D); MtaA/CmuA family methyltransferase 407852 12420072 Clo1313_0373 Clostridium thermocellum DSM 1313 MtaA/CmuA family methyltransferase YP_005686914.1 406734 D 637887 CDS YP_005686915.1 385777750 12420073 407889..408956 1 NC_017304.1 KEGG: geo:Geob_2543 methylcobalamin:coenzyme M methyltransferase; TIGRFAM: methyltransferase MtaA/CmuA family; PFAM: Uroporphyrinogen decarboxylase (URO-D); MtaA/CmuA family methyltransferase 408956 12420073 Clo1313_0374 Clostridium thermocellum DSM 1313 MtaA/CmuA family methyltransferase YP_005686915.1 407889 D 637887 CDS YP_005686916.1 385777751 12420074 408916..410592 1 NC_017304.1 PFAM: ferredoxin; KEGG: geo:Geob_2544 ferredoxin; ferredoxin 410592 12420074 Clo1313_0375 Clostridium thermocellum DSM 1313 ferredoxin YP_005686916.1 408916 D 637887 CDS YP_005686917.1 385777752 12420075 410606..411262 1 NC_017304.1 PFAM: protein of unknown function DUF1847; KEGG: dhd:Dhaf_4575 protein of unknown function DUF1847; hypothetical protein 411262 12420075 Clo1313_0376 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686917.1 410606 D 637887 CDS YP_005686918.1 385777753 12420076 411292..412374 1 NC_017304.1 KEGG: geo:Geob_2534 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 412374 12420076 Clo1313_0377 Clostridium thermocellum DSM 1313 family 3 extracellular solute-binding protein YP_005686918.1 411292 D 637887 CDS YP_005686919.1 385777754 12420077 412390..413196 1 NC_017304.1 KEGG: mbn:Mboo_0164 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 413196 12420077 Clo1313_0378 Clostridium thermocellum DSM 1313 ABC transporter YP_005686919.1 412390 D 637887 CDS YP_005686920.1 385777755 12420078 413222..414130 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: geo:Geob_2535 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 414130 12420078 Clo1313_0379 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005686920.1 413222 D 637887 CDS YP_005686921.1 385777756 12420079 414149..415471 1 NC_017304.1 KEGG: fma:FMG_0215 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase 415471 12420079 Clo1313_0380 Clostridium thermocellum DSM 1313 phenylacetate--CoA ligase YP_005686921.1 414149 D 637887 CDS YP_005686922.1 385777757 12420080 415476..416648 1 NC_017304.1 PFAM: aminotransferase class I and II; KEGG: eel:EUBELI_20597 hypothetical protein; class I and II aminotransferase 416648 12420080 Clo1313_0381 Clostridium thermocellum DSM 1313 class I and II aminotransferase YP_005686922.1 415476 D 637887 CDS YP_005686923.1 385777758 12420081 416645..417190 1 NC_017304.1 KEGG: ele:Elen_0416 pyruvate/ketoisovalerate oxidoreductase, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; pyruvate/ketoisovalerate oxidoreductase subunit gamma 417190 12420081 Clo1313_0382 Clostridium thermocellum DSM 1313 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_005686923.1 416645 D 637887 CDS YP_005686924.1 385777759 12420082 417187..417498 1 NC_017304.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; KEGG: ccu:Ccur_08380 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family/2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta 417498 12420082 Clo1313_0383 Clostridium thermocellum DSM 1313 pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta YP_005686924.1 417187 D 637887 CDS YP_005686925.1 385777760 12420083 417488..418675 1 NC_017304.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain-containing protein; KEGG: fma:FMG_0217 pyruvate/ferredoxin oxidoreductase alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 418675 12420083 Clo1313_0384 Clostridium thermocellum DSM 1313 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_005686925.1 417488 D 637887 CDS YP_005686926.1 385777761 12420084 418668..419573 1 NC_017304.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: ele:Elen_0418 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate TPP-binding domain-containing protein 419573 12420084 Clo1313_0385 Clostridium thermocellum DSM 1313 thiamine pyrophosphate TPP-binding domain-containing protein YP_005686926.1 418668 D 637887 CDS YP_005686927.1 385777762 12420085 419668..419880 1 NC_017304.1 KEGG: fpl:Ferp_0140 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein 419880 12420085 Clo1313_0386 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686927.1 419668 D 637887 CDS YP_005686928.1 385777763 12420086 419993..420373 1 NC_017304.1 KEGG: eel:EUBELI_01818 TdcF protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 420373 12420086 Clo1313_0387 Clostridium thermocellum DSM 1313 endoribonuclease L-PSP YP_005686928.1 419993 D 637887 CDS YP_005686929.1 385777764 12420087 420393..421553 1 NC_017304.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: amt:Amet_3707 cystathionine gamma-synthase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 421553 12420087 Clo1313_0388 Clostridium thermocellum DSM 1313 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_005686929.1 420393 D 637887 CDS YP_005686930.1 385777765 12420088 421564..422745 1 NC_017304.1 PFAM: aminotransferase class I and II; KEGG: kol:Kole_0146 aminotransferase class I and II; class I and II aminotransferase 422745 12420088 Clo1313_0389 Clostridium thermocellum DSM 1313 class I and II aminotransferase YP_005686930.1 421564 D 637887 CDS YP_005686931.1 385777766 12420089 422896..424908 1 NC_017304.1 TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; KEGG: cce:Ccel_0438 carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase, catalytic subunit 424908 12420089 Clo1313_0390 Clostridium thermocellum DSM 1313 carbon-monoxide dehydrogenase, catalytic subunit YP_005686931.1 422896 D 637887 CDS YP_005686932.1 385777767 12420090 424967..425950 1 NC_017304.1 SMART: extracellular solute-binding protein family 3; KEGG: cce:Ccel_0437 extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 425950 12420090 Clo1313_0391 Clostridium thermocellum DSM 1313 family 3 extracellular solute-binding protein YP_005686932.1 424967 D 637887 CDS YP_005686933.1 385777768 12420091 425950..426729 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bse:Bsel_2699 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 426729 12420091 Clo1313_0392 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005686933.1 425950 D 637887 CDS YP_005686934.1 385777769 12420092 426731..427501 1 NC_017304.1 KEGG: cce:Ccel_0435 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 427501 12420092 Clo1313_0393 Clostridium thermocellum DSM 1313 ABC transporter YP_005686934.1 426731 D 637887 CDS YP_005686935.1 385777770 12420093 complement(427630..429762) 1 NC_017304.1 KEGG: cce:Ccel_0881 carbohydrate-binding, CenC-like protein; hypothetical protein 429762 12420093 Clo1313_0394 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686935.1 427630 R 637887 CDS YP_005686936.1 385777771 12420094 430143..431174 1 NC_017304.1 PFAM: glycoside hydrolase family 5; KEGG: ttr:Tter_2195 glycoside hydrolase family 5; glycoside hydrolase 431174 12420094 Clo1313_0395 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686936.1 430143 D 637887 CDS YP_005686937.1 385777772 12420095 431291..432328 1 NC_017304.1 KEGG: tmt:Tmath_0383 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 432328 12420095 Clo1313_0396 Clostridium thermocellum DSM 1313 LacI family transcriptional regulator YP_005686937.1 431291 D 637887 CDS YP_005686938.1 385777773 12420096 432438..436844 1 NC_017304.1 KEGG: pjd:Pjdr2_0951 licheninase; PFAM: glycoside hydrolase family 16; Carbohydrate-binding CenC domain protein; S-layer domain-containing protein; glucan endo-1,3-beta-D-glucosidase 436844 12420096 Clo1313_0397 Clostridium thermocellum DSM 1313 glucan endo-1,3-beta-D-glucosidase YP_005686938.1 432438 D 637887 CDS YP_005686939.1 385777774 12420097 437030..438784 1 NC_017304.1 KEGG: cpy:Cphy_2825 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; Na/Pi-cotransporter II-like protein 438784 12420097 Clo1313_0398 Clostridium thermocellum DSM 1313 Na/Pi-cotransporter II-like protein YP_005686939.1 437030 D 637887 CDS YP_005686940.1 385777775 12420098 439139..440914 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: cce:Ccel_0752 glycoside hydrolase family 26; Dockerin type 1 440914 12420098 Clo1313_0399 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005686940.1 439139 D 637887 CDS YP_005686941.1 385777776 12420099 441279..443117 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0753 glycoside hydrolase family 9; glycoside hydrolase 443117 12420099 Clo1313_0400 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686941.1 441279 D 637887 CDS YP_005686942.1 385777777 12420100 443411..444106 1 NC_017304.1 KEGG: dhd:Dhaf_2940 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 444106 12420100 Clo1313_0401 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005686942.1 443411 D 637887 CDS YP_005686943.1 385777778 12420101 444081..446120 1 NC_017304.1 KEGG: ctc:CTC02155 sensory transduction protein kinase; PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 446120 12420101 Clo1313_0402 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005686943.1 444081 D 637887 CDS YP_005686944.1 385777779 12420102 complement(446237..447838) 1 NC_017304.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: bcg:BCG9842_B2757 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; lysyl-tRNA synthetase 447838 12420102 Clo1313_0403 Clostridium thermocellum DSM 1313 lysyl-tRNA synthetase YP_005686944.1 446237 R 637887 CDS YP_005686945.1 385777780 12420104 449327..449752 1 NC_017304.1 KEGG: cbe:Cbei_4184 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 449752 12420104 Clo1313_0405 Clostridium thermocellum DSM 1313 CheW protein YP_005686945.1 449327 D 637887 CDS YP_005686946.1 385777781 12420105 449768..451576 1 NC_017304.1 KEGG: cbe:Cbei_4183 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; CheA signal transduction histidine kinase 451576 12420105 Clo1313_0406 Clostridium thermocellum DSM 1313 CheA signal transduction histidine kinase YP_005686946.1 449768 D 637887 CDS YP_005686947.1 385777782 12420106 451610..456034 1 NC_017304.1 KEGG: cbe:Cbei_4182 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 456034 12420106 Clo1313_0407 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005686947.1 451610 D 637887 CDS YP_005686948.1 385777783 12420107 456147..456980 1 NC_017304.1 PFAM: MCP methyltransferase CheR-type; KEGG: cbe:Cbei_4181 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 456980 12420107 Clo1313_0408 Clostridium thermocellum DSM 1313 chemotaxis protein CheR YP_005686948.1 456147 D 637887 CDS YP_005686949.1 385777784 12420108 456959..458053 1 NC_017304.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: cbe:Cbei_4180 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 458053 12420108 Clo1313_0409 Clostridium thermocellum DSM 1313 response regulator receiver modulated CheB methylesterase YP_005686949.1 456959 D 637887 CDS YP_005686950.1 385777785 12420109 458258..459244 1 NC_017304.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_3898 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 459244 12420109 Clo1313_0410 Clostridium thermocellum DSM 1313 oxidoreductase domain-containing protein YP_005686950.1 458258 D 637887 CDS YP_005686951.1 385777786 12420110 459775..461076 1 NC_017304.1 KEGG: cce:Ccel_0252 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; hypothetical protein 461076 12420110 Clo1313_0411 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686951.1 459775 D 637887 CDS YP_005686952.1 385777787 12420111 461116..461628 1 NC_017304.1 PFAM: TipAS antibiotic-recognition domain-containing protein; KEGG: cce:Ccel_1781 transcriptional regulator, MerR family; TipAS antibiotic-recognition domain-containing protein 461628 12420111 Clo1313_0412 Clostridium thermocellum DSM 1313 TipAS antibiotic-recognition domain-containing protein YP_005686952.1 461116 D 637887 CDS YP_005686953.1 385777788 12420112 complement(461711..463411) 1 NC_017304.1 PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_0740 glycoside hydrolase family 5; glycoside hydrolase 463411 12420112 Clo1313_0413 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686953.1 461711 R 637887 CDS YP_005686954.1 385777789 12420113 complement(463715..464416) 1 NC_017304.1 PFAM: Protein of unknown function DUF3592; KEGG: cyc:PCC7424_4056 hypothetical protein; hypothetical protein 464416 12420113 Clo1313_0414 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686954.1 463715 R 637887 CDS YP_005686955.1 385777790 12420114 464814..466631 1 NC_017304.1 KEGG: cce:Ccel_0212 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (GTP); phosphoenolpyruvate carboxykinase 466631 12420114 Clo1313_0415 Clostridium thermocellum DSM 1313 phosphoenolpyruvate carboxykinase YP_005686955.1 464814 D 637887 CDS YP_005686956.1 385777791 12420115 467907..468440 1 NC_017304.1 KEGG: cce:Ccel_0370 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 468440 12420115 Clo1313_0416 Clostridium thermocellum DSM 1313 sigma 54 modulation protein/ribosomal protein S30EA YP_005686956.1 467907 D 637887 CDS YP_005686957.1 385777792 12420116 468555..470780 1 NC_017304.1 KEGG: cce:Ccel_0373 ATP-dependent DNA helicase PcrA; TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase PcrA 470780 12420116 Clo1313_0417 Clostridium thermocellum DSM 1313 ATP-dependent DNA helicase PcrA YP_005686957.1 468555 D 637887 CDS YP_005686958.1 385777793 12420117 470926..472683 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0039 S-layer domain protein; S-layer protein 472683 12420117 Clo1313_0418 Clostridium thermocellum DSM 1313 S-layer protein YP_005686958.1 470926 D 637887 CDS YP_005686959.1 385777794 12420118 472853..473746 1 NC_017304.1 PFAM: peptidase C39 bacteriocin processing; KEGG: rba:RB5722 hypothetical protein; peptidase C39 bacteriocin processing 473746 12420118 Clo1313_0419 Clostridium thermocellum DSM 1313 peptidase C39 bacteriocin processing YP_005686959.1 472853 D 637887 CDS YP_005686960.1 385777795 12420119 complement(473998..475533) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: scl:sce4860 hypothetical protein; Dockerin type 1 475533 12420119 Clo1313_0420 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005686960.1 473998 R 637887 CDS YP_005686961.1 385777796 12420120 476052..477308 1 NC_017304.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: cce:Ccel_0380 histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); histidyl-tRNA synthetase 2 477308 12420120 Clo1313_0421 Clostridium thermocellum DSM 1313 histidyl-tRNA synthetase 2 YP_005686961.1 476052 D 637887 CDS YP_005686962.1 385777797 12420121 477326..477967 1 NC_017304.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: cce:Ccel_0381 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 477967 12420121 Clo1313_0422 Clostridium thermocellum DSM 1313 ATP phosphoribosyltransferase YP_005686962.1 477326 D 637887 CDS YP_005686963.1 385777798 12420122 477973..479280 1 NC_017304.1 TIGRFAM: histidinol dehydrogenase; KEGG: tmt:Tmath_1798 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 479280 12420122 Clo1313_0423 Clostridium thermocellum DSM 1313 histidinol dehydrogenase YP_005686963.1 477973 D 637887 CDS YP_005686964.1 385777799 12420123 479515..480591 1 NC_017304.1 KEGG: cce:Ccel_0383 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 480591 12420123 Clo1313_0424 Clostridium thermocellum DSM 1313 histidinol-phosphate aminotransferase YP_005686964.1 479515 D 637887 CDS YP_005686965.1 385777800 12420124 480704..481291 1 NC_017304.1 KEGG: tte:TTE2136 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 481291 12420124 Clo1313_0425 Clostridium thermocellum DSM 1313 imidazoleglycerol-phosphate dehydratase YP_005686965.1 480704 D 637887 CDS YP_005686966.1 385777801 12420125 481394..482278 1 NC_017304.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: cce:Ccel_0385 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole succinocarboxamide synthase 482278 12420125 Clo1313_0426 Clostridium thermocellum DSM 1313 phosphoribosylaminoimidazole succinocarboxamide synthase YP_005686966.1 481394 D 637887 CDS YP_005686967.1 385777802 12420126 482360..482980 1 NC_017304.1 KEGG: cce:Ccel_0386 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 482980 12420126 Clo1313_0427 Clostridium thermocellum DSM 1313 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_005686967.1 482360 D 637887 CDS YP_005686968.1 385777803 12420127 483048..483761 1 NC_017304.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: cce:Ccel_0387 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 483761 12420127 Clo1313_0428 Clostridium thermocellum DSM 1313 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_005686968.1 483048 D 637887 CDS YP_005686969.1 385777804 12420128 483774..484535 1 NC_017304.1 KEGG: cce:Ccel_0388 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit 484535 12420128 Clo1313_0429 Clostridium thermocellum DSM 1313 Imidazole glycerol phosphate synthase cyclase subunit YP_005686969.1 483774 D 637887 CDS YP_005686970.1 385777805 12420129 484557..485219 1 NC_017304.1 KEGG: cce:Ccel_0389 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 485219 12420129 Clo1313_0430 Clostridium thermocellum DSM 1313 phosphoribosyl-ATP diphosphatase YP_005686970.1 484557 D 637887 CDS YP_005686971.1 385777806 12420130 485243..486412 1 NC_017304.1 PFAM: AAA-4 family protein; KEGG: csc:Csac_0945 putative transcriptional regulator; transcriptional regulator 486412 12420130 Clo1313_0431 Clostridium thermocellum DSM 1313 transcriptional regulator YP_005686971.1 485243 D 637887 CDS YP_005686972.1 385777807 12420131 486635..486919 1 NC_017304.1 PFAM: Chaperonin Cpn10; KEGG: cce:Ccel_0391 co-chaperonin GroES; chaperonin Cpn10 486919 12420131 Clo1313_0432 Clostridium thermocellum DSM 1313 chaperonin Cpn10 YP_005686972.1 486635 D 637887 CDS YP_005686973.1 385777808 12420132 486968..488593 1 NC_017304.1 KEGG: cce:Ccel_0392 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 488593 12420132 Clo1313_0433 Clostridium thermocellum DSM 1313 chaperonin GroEL YP_005686973.1 486968 D 637887 CDS YP_005686974.1 385777809 12420133 488844..489899 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: chy:CHY_1012 putative flagellar protein; type IV pilus assembly PilZ 489899 12420133 Clo1313_0434 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005686974.1 488844 D 637887 CDS YP_005686975.1 385777810 12420134 489933..490463 1 NC_017304.1 KEGG: tte:TTE1989 hypothetical protein; hypothetical protein 490463 12420134 Clo1313_0435 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686975.1 489933 D 637887 CDS YP_005686976.1 385777811 12420135 490586..492337 1 NC_017304.1 KEGG: nth:Nther_0489 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; copper amine oxidase-like domain-containing protein; SMART: chitinase II; glycoside hydrolase 492337 12420135 Clo1313_0436 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005686976.1 490586 D 637887 CDS YP_005686977.1 385777812 12420136 492413..493366 1 NC_017304.1 KEGG: tpd:Teth39_0316 shikimate/quinate 5-dehydrogenase; hypothetical protein 493366 12420136 Clo1313_0437 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686977.1 492413 D 637887 CDS YP_005686978.1 385777813 12420137 493695..494174 1 NC_017304.1 KEGG: cce:Ccel_0395 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreA 494174 12420137 Clo1313_0438 Clostridium thermocellum DSM 1313 transcription elongation factor GreA YP_005686978.1 493695 D 637887 CDS YP_005686979.1 385777814 12420138 494523..494837 1 NC_017304.1 KEGG: ate:Athe_0435 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 494837 12420138 Clo1313_0439 Clostridium thermocellum DSM 1313 anti-sigma-factor antagonist YP_005686979.1 494523 D 637887 CDS YP_005686980.1 385777815 12420139 494850..495242 1 NC_017304.1 KEGG: cce:Ccel_0399 putative anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 495242 12420139 Clo1313_0440 Clostridium thermocellum DSM 1313 anti-sigma regulatory factor YP_005686980.1 494850 D 637887 CDS YP_005686981.1 385777816 12420140 495245..496003 1 NC_017304.1 KEGG: ate:Athe_0437 RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; sigma-B/F/G subfamily RNA polymerase sigma-28 factor 496003 12420140 Clo1313_0441 Clostridium thermocellum DSM 1313 sigma-B/F/G subfamily RNA polymerase sigma-28 factor YP_005686981.1 495245 D 637887 CDS YP_005686982.1 385777817 12420141 496170..496604 1 NC_017304.1 PFAM: ATP-binding region ATPase domain protein; KEGG: ate:Athe_2394 putative anti-sigma regulatory factor, serine/threonine protein kinase; ATP-binding protein 496604 12420141 Clo1313_0442 Clostridium thermocellum DSM 1313 ATP-binding protein YP_005686982.1 496170 D 637887 CDS YP_005686983.1 385777818 12420146 502368..502526 1 NC_017304.1 hypothetical protein 502526 12420146 Clo1313_0443 Clostridium thermocellum DSM 1313 hypothetical protein YP_005686983.1 502368 D 637887 CDS YP_005686984.1 385777819 12420147 502624..502935 1 NC_017304.1 KEGG: cce:Ccel_0757 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 502935 12420147 Clo1313_0444 Clostridium thermocellum DSM 1313 30S ribosomal protein S10 YP_005686984.1 502624 D 637887 CDS YP_005686985.1 385777820 12420148 503038..503676 1 NC_017304.1 KEGG: cce:Ccel_0758 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 503676 12420148 Clo1313_0445 Clostridium thermocellum DSM 1313 50S ribosomal protein L3 YP_005686985.1 503038 D 637887 CDS YP_005686986.1 385777821 12420149 503700..504326 1 NC_017304.1 PFAM: ribosomal protein L4/L1e; KEGG: cce:Ccel_0759 50S ribosomal protein L4; 50S ribosomal protein L4 504326 12420149 Clo1313_0446 Clostridium thermocellum DSM 1313 50S ribosomal protein L4 YP_005686986.1 503700 D 637887 CDS YP_005686987.1 385777822 12420150 504326..504679 1 NC_017304.1 PFAM: Ribosomal protein L25/L23; KEGG: cce:Ccel_0760 50S ribosomal protein L23; 50S ribosomal protein L25 504679 12420150 Clo1313_0447 Clostridium thermocellum DSM 1313 50S ribosomal protein L25 YP_005686987.1 504326 D 637887 CDS YP_005686988.1 385777823 12420151 504723..505550 1 NC_017304.1 KEGG: tte:TTE2290 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 505550 12420151 Clo1313_0448 Clostridium thermocellum DSM 1313 50S ribosomal protein L2 YP_005686988.1 504723 D 637887 CDS YP_005686989.1 385777824 12420152 505607..505891 1 NC_017304.1 KEGG: tjr:TherJR_0300 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 505891 12420152 Clo1313_0449 Clostridium thermocellum DSM 1313 30S ribosomal protein S19 YP_005686989.1 505607 D 637887 CDS YP_005686990.1 385777825 12420153 505922..506398 1 NC_017304.1 KEGG: cce:Ccel_0763 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 506398 12420153 Clo1313_0450 Clostridium thermocellum DSM 1313 50S ribosomal protein L22 YP_005686990.1 505922 D 637887 CDS YP_005686991.1 385777826 12420154 506418..507098 1 NC_017304.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: cce:Ccel_0764 ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 507098 12420154 Clo1313_0451 Clostridium thermocellum DSM 1313 30S ribosomal protein S3 YP_005686991.1 506418 D 637887 CDS YP_005686992.1 385777827 12420155 507085..507522 1 NC_017304.1 KEGG: cce:Ccel_0765 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 507522 12420155 Clo1313_0452 Clostridium thermocellum DSM 1313 50S ribosomal protein L16 YP_005686992.1 507085 D 637887 CDS YP_005686993.1 385777828 12420156 507512..507715 1 NC_017304.1 KEGG: cce:Ccel_0766 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 507715 12420156 Clo1313_0453 Clostridium thermocellum DSM 1313 50S ribosomal protein L29 YP_005686993.1 507512 D 637887 CDS YP_005686994.1 385777829 12420157 507742..507999 1 NC_017304.1 KEGG: cce:Ccel_0767 ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 507999 12420157 Clo1313_0454 Clostridium thermocellum DSM 1313 30S ribosomal protein S17 YP_005686994.1 507742 D 637887 CDS YP_005686995.1 385777830 12420158 508024..508392 1 NC_017304.1 KEGG: cce:Ccel_0768 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 508392 12420158 Clo1313_0455 Clostridium thermocellum DSM 1313 50S ribosomal protein L14 YP_005686995.1 508024 D 637887 CDS YP_005686996.1 385777831 12420159 508411..508761 1 NC_017304.1 TIGRFAM: ribosomal protein L24; KEGG: cce:Ccel_0769 50S ribosomal protein L24; 50S ribosomal protein L24 508761 12420159 Clo1313_0456 Clostridium thermocellum DSM 1313 50S ribosomal protein L24 YP_005686996.1 508411 D 637887 CDS YP_005686997.1 385777832 12420160 508793..509335 1 NC_017304.1 KEGG: cce:Ccel_0770 50S ribosomal protein L5; 50S ribosomal protein L5 509335 12420160 Clo1313_0457 Clostridium thermocellum DSM 1313 50S ribosomal protein L5 YP_005686997.1 508793 D 637887 CDS YP_005686998.1 385777833 12420161 509351..509536 1 NC_017304.1 KEGG: cce:Ccel_0771 30S ribosomal protein S14; manually curated; PFAM: ribosomal protein S14; 30S ribosomal protein S14 509536 12420161 Clo1313_0458 Clostridium thermocellum DSM 1313 30S ribosomal protein S14 YP_005686998.1 509351 D 637887 CDS YP_005686999.1 385777834 12420162 509563..509961 1 NC_017304.1 PFAM: ribosomal protein S8; KEGG: cce:Ccel_0772 30S ribosomal protein S8; 30S ribosomal protein S8 509961 12420162 Clo1313_0459 Clostridium thermocellum DSM 1313 30S ribosomal protein S8 YP_005686999.1 509563 D 637887 CDS YP_005687000.1 385777835 12420163 510035..510586 1 NC_017304.1 KEGG: cce:Ccel_0773 ribosomal protein L6 signature 1; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 510586 12420163 Clo1313_0460 Clostridium thermocellum DSM 1313 50S ribosomal protein L6 YP_005687000.1 510035 D 637887 CDS YP_005687001.1 385777836 12420164 510602..510970 1 NC_017304.1 KEGG: cce:Ccel_0774 ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 510970 12420164 Clo1313_0461 Clostridium thermocellum DSM 1313 50S ribosomal protein L18 YP_005687001.1 510602 D 637887 CDS YP_005687002.1 385777837 12420165 510990..511490 1 NC_017304.1 KEGG: cce:Ccel_0775 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; 30S ribosomal protein S5 511490 12420165 Clo1313_0462 Clostridium thermocellum DSM 1313 30S ribosomal protein S5 YP_005687002.1 510990 D 637887 CDS YP_005687003.1 385777838 12420166 511503..511682 1 NC_017304.1 KEGG: cce:Ccel_0776 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 511682 12420166 Clo1313_0463 Clostridium thermocellum DSM 1313 50S ribosomal protein L30 YP_005687003.1 511503 D 637887 CDS YP_005687004.1 385777839 12420167 511697..512137 1 NC_017304.1 TIGRFAM: ribosomal protein L15; KEGG: cce:Ccel_0777 50S ribosomal protein L15; 50S ribosomal protein L15 512137 12420167 Clo1313_0464 Clostridium thermocellum DSM 1313 50S ribosomal protein L15 YP_005687004.1 511697 D 637887 CDS YP_005687005.1 385777840 12420168 512139..513422 1 NC_017304.1 KEGG: cce:Ccel_0778 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 513422 12420168 Clo1313_0465 Clostridium thermocellum DSM 1313 preprotein translocase subunit SecY YP_005687005.1 512139 D 637887 CDS YP_005687006.1 385777841 12420169 513486..514139 1 NC_017304.1 KEGG: ate:Athe_1725 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein; adenylate kinase 514139 12420169 Clo1313_0466 Clostridium thermocellum DSM 1313 adenylate kinase YP_005687006.1 513486 D 637887 CDS YP_005687007.1 385777842 12420170 514136..514906 1 NC_017304.1 KEGG: tte:TTE2270 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 514906 12420170 Clo1313_0467 Clostridium thermocellum DSM 1313 methionine aminopeptidase YP_005687007.1 514136 D 637887 CDS YP_005687008.1 385777843 12420171 514938..515210 1 NC_017304.1 KEGG: tpd:Teth39_0396 hypothetical protein; hypothetical protein 515210 12420171 Clo1313_0468 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687008.1 514938 D 637887 CDS YP_005687009.1 385777844 12420172 515252..515470 1 NC_017304.1 KEGG: cce:Ccel_0782 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 515470 12420172 Clo1313_0469 Clostridium thermocellum DSM 1313 translation initiation factor IF-1 YP_005687009.1 515252 D 637887 CDS YP_005687010.1 385777845 12420173 515490..515603 1 NC_017304.1 KEGG: adg:Adeg_1500 ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 515603 12420173 Clo1313_0470 Clostridium thermocellum DSM 1313 50S ribosomal protein L36 YP_005687010.1 515490 D 637887 CDS YP_005687011.1 385777846 12420174 515917..516288 1 NC_017304.1 KEGG: tjr:TherJR_0321 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 516288 12420174 Clo1313_0471 Clostridium thermocellum DSM 1313 30S ribosomal protein S13 YP_005687011.1 515917 D 637887 CDS YP_005687012.1 385777847 12420175 516310..516714 1 NC_017304.1 KEGG: cce:Ccel_0785 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 516714 12420175 Clo1313_0472 Clostridium thermocellum DSM 1313 30S ribosomal protein S11 YP_005687012.1 516310 D 637887 CDS YP_005687013.1 385777848 12420176 516766..517392 1 NC_017304.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: cce:Ccel_0786 ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 517392 12420176 Clo1313_0473 Clostridium thermocellum DSM 1313 30S ribosomal protein S4 YP_005687013.1 516766 D 637887 CDS YP_005687014.1 385777849 12420177 517534..518481 1 NC_017304.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: cce:Ccel_0787 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 518481 12420177 Clo1313_0474 Clostridium thermocellum DSM 1313 DNA-directed RNA polymerase subunit alpha YP_005687014.1 517534 D 637887 CDS YP_005687015.1 385777850 12420178 518567..519091 1 NC_017304.1 KEGG: cce:Ccel_0788 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 519091 12420178 Clo1313_0475 Clostridium thermocellum DSM 1313 50S ribosomal protein L17 YP_005687015.1 518567 D 637887 CDS YP_005687016.1 385777851 12420179 519175..520032 1 NC_017304.1 KEGG: cce:Ccel_0789 ABC transporter related; PFAM: Cobalt ATP-binding cassette-like; ABC transporter related; SMART: AAA ATPase; Cobalt ATP-binding cassette-like protein 520032 12420179 Clo1313_0476 Clostridium thermocellum DSM 1313 Cobalt ATP-binding cassette-like protein YP_005687016.1 519175 D 637887 CDS YP_005687017.1 385777852 12420180 complement(520111..520701) 1 NC_017304.1 PFAM: methyltransferase small; KEGG: gwc:GWCH70_0102 methyltransferase small; methyltransferase small 520701 12420180 Clo1313_0477 Clostridium thermocellum DSM 1313 methyltransferase small YP_005687017.1 520111 R 637887 CDS YP_005687018.1 385777853 12420181 complement(520891..523416) 1 NC_017304.1 PFAM: type III restriction protein res subunit; KEGG: afl:Aflv_1175 predicted type III restriction-modification enzyme, helicase subunit fused to restriction endonuclease-like domain; type III restriction protein res subunit 523416 12420181 Clo1313_0478 Clostridium thermocellum DSM 1313 type III restriction protein res subunit YP_005687018.1 520891 R 637887 CDS YP_005687019.1 385777854 12420182 complement(523416..524579) 1 NC_017304.1 PFAM: protein of unknown function DUF55; KEGG: btb:BMB171_C4699 hypothetical protein; hypothetical protein 524579 12420182 Clo1313_0479 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687019.1 523416 R 637887 CDS YP_005687020.1 385777855 12420183 complement(524576..526447) 1 NC_017304.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sli:Slin_6680 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 526447 12420183 Clo1313_0480 Clostridium thermocellum DSM 1313 DNA methylase N-4/N-6 domain-containing protein YP_005687020.1 524576 R 637887 CDS YP_005687021.1 385777856 12420184 complement(526559..526837) 1 NC_017304.1 KEGG: slp:Slip_0085 hypothetical protein; hypothetical protein 526837 12420184 Clo1313_0481 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687021.1 526559 R 637887 CDS YP_005687022.1 385777857 12420185 complement(527102..529129) 1 NC_017304.1 SMART: regulatory protein DeoR; KEGG: slp:Slip_1135 regulatory protein DeoR; regulatory protein DeoR 529129 12420185 Clo1313_0482 Clostridium thermocellum DSM 1313 regulatory protein DeoR YP_005687022.1 527102 R 637887 CDS YP_005687023.1 385777858 12420186 529341..529607 1 NC_017304.1 KEGG: tmt:Tmath_1504 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 529607 12420186 Clo1313_0483 Clostridium thermocellum DSM 1313 LuxR family transcriptional regulator YP_005687023.1 529341 D 637887 CDS YP_005687024.1 385777859 12420187 529609..529992 1 NC_017304.1 KEGG: slp:Slip_1133 hypothetical protein; hypothetical protein 529992 12420187 Clo1313_0484 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687024.1 529609 D 637887 CDS YP_005687025.1 385777860 12420188 530210..531529 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; glycoside hydrolase family 18; KEGG: slp:Slip_1942 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 531529 12420188 Clo1313_0485 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687025.1 530210 D 637887 CDS YP_005687026.1 385777861 12420189 531534..533240 1 NC_017304.1 KEGG: slp:Slip_0079 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SMART: Resolvase domain; resolvase domain-containing protein 533240 12420189 Clo1313_0486 Clostridium thermocellum DSM 1313 resolvase domain-containing protein YP_005687026.1 531534 D 637887 CDS YP_005687027.1 385777862 12420190 533584..534429 1 NC_017304.1 KEGG: amt:Amet_4446 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; Cobalt ATP-binding cassette-like; SMART: AAA ATPase; ABC transporter 534429 12420190 Clo1313_0487 Clostridium thermocellum DSM 1313 ABC transporter YP_005687027.1 533584 D 637887 CDS YP_005687028.1 385777863 12420191 534437..535246 1 NC_017304.1 PFAM: cobalt transport protein; KEGG: cce:Ccel_0792 cobalt transport protein; cobalt transport protein 535246 12420191 Clo1313_0488 Clostridium thermocellum DSM 1313 cobalt transport protein YP_005687028.1 534437 D 637887 CDS YP_005687029.1 385777864 12420192 535317..536270 1 NC_017304.1 KEGG: ate:Athe_0552 glucokinase, ROK family; TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; ATPase BadF/BadG/BcrA/BcrD type; ROK family glucokinase 536270 12420192 Clo1313_0489 Clostridium thermocellum DSM 1313 ROK family glucokinase YP_005687029.1 535317 D 637887 CDS YP_005687030.1 385777865 12420193 536354..537088 1 NC_017304.1 KEGG: cce:Ccel_0793 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 537088 12420193 Clo1313_0490 Clostridium thermocellum DSM 1313 tRNA pseudouridine synthase A YP_005687030.1 536354 D 637887 CDS YP_005687031.1 385777866 12420194 537481..537957 1 NC_017304.1 PFAM: transcription factor CarD; KEGG: cce:Ccel_0340 transcriptional regulator, CarD family; CarD family transcriptional regulator 537957 12420194 Clo1313_0491 Clostridium thermocellum DSM 1313 CarD family transcriptional regulator YP_005687031.1 537481 D 637887 CDS YP_005687032.1 385777867 12420195 538180..538893 1 NC_017304.1 KEGG: cce:Ccel_0342 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 538893 12420195 Clo1313_0492 Clostridium thermocellum DSM 1313 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_005687032.1 538180 D 637887 CDS YP_005687033.1 385777868 12420196 538942..539697 1 NC_017304.1 KEGG: tex:Teth514_0363 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 539697 12420196 Clo1313_0493 Clostridium thermocellum DSM 1313 ABC transporter YP_005687033.1 538942 D 637887 CDS YP_005687034.1 385777869 12420197 539663..540880 1 NC_017304.1 PFAM: ABC-2 type transporter; KEGG: tte:TTE0411 ABC-type Na+ efflux pump, permease component; ABC transporter 540880 12420197 Clo1313_0494 Clostridium thermocellum DSM 1313 ABC transporter YP_005687034.1 539663 D 637887 CDS YP_005687035.1 385777870 12420198 541149..542963 1 NC_017304.1 KEGG: cce:Ccel_2145 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 542963 12420198 Clo1313_0495 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005687035.1 541149 D 637887 CDS YP_005687036.1 385777871 12420199 542984..544834 1 NC_017304.1 KEGG: cce:Ccel_2145 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase 544834 12420199 Clo1313_0496 Clostridium thermocellum DSM 1313 histidine kinase YP_005687036.1 542984 D 637887 CDS YP_005687037.1 385777872 12420200 complement(544821..545291) 1 NC_017304.1 TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; KEGG: cce:Ccel_0344 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 545291 12420200 Clo1313_0497 Clostridium thermocellum DSM 1313 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_005687037.1 544821 R 637887 CDS YP_005687038.1 385777873 12420201 545926..547644 1 NC_017304.1 KEGG: tte:TTE2319 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; prolyl-tRNA synthetase 547644 12420201 Clo1313_0498 Clostridium thermocellum DSM 1313 prolyl-tRNA synthetase YP_005687038.1 545926 D 637887 CDS YP_005687039.1 385777874 12420202 547867..548709 1 NC_017304.1 KEGG: cce:Ccel_0346 SCP-like extracellular; PFAM: SCP-like extracellular; SH3 type 3 domain protein; SMART: SH3 domain protein; hypothetical protein 548709 12420202 Clo1313_0499 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687039.1 547867 D 637887 CDS YP_005687040.1 385777875 12420203 complement(548762..550465) 1 NC_017304.1 PFAM: Pectinesterase; Dockerin type 1; KEGG: cce:Ccel_1246 pectinesterase; pectinesterase 550465 12420203 Clo1313_0500 Clostridium thermocellum DSM 1313 pectinesterase YP_005687040.1 548762 R 637887 CDS YP_005687041.1 385777876 12420204 complement(550720..552384) 1 NC_017304.1 KEGG: hau:Haur_3461 cellulose-binding family II protein; PFAM: Pectate lyase/Amb allergen; Dockerin type 1; Carbohydrate binding family 6; SMART: Pectate lyase/Amb allergen; cellulose binding type IV; Pectate lyase/Amb allergen 552384 12420204 Clo1313_0501 Clostridium thermocellum DSM 1313 Pectate lyase/Amb allergen YP_005687041.1 550720 R 637887 CDS YP_005687042.1 385777877 12420205 552839..553471 1 NC_017304.1 KEGG: tra:Trad_0079 hypothetical protein; hypothetical protein 553471 12420205 Clo1313_0502 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687042.1 552839 D 637887 CDS YP_005687043.1 385777878 12420206 complement(553415..554140) 1 NC_017304.1 PFAM: IstB domain protein ATP-binding protein; KEGG: dsy:DSY0816 hypothetical protein; IstB domain-containing protein ATP-binding protein 554140 12420206 Clo1313_0503 Clostridium thermocellum DSM 1313 IstB domain-containing protein ATP-binding protein YP_005687043.1 553415 R 637887 CDS YP_005687044.1 385777879 12420208 555923..556444 1 NC_017304.1 KEGG: pop:POPTR_567840 pectinesterase family protein; hypothetical protein 556444 12420208 Clo1313_0505 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687044.1 555923 D 637887 CDS YP_005687045.1 385777880 12420211 560865..561197 1 NC_017304.1 manually curated; KEGG: acl:ACL_0441 hypothetical protein; hypothetical protein 561197 12420211 Clo1313_0509 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687045.1 560865 D 637887 CDS YP_005687046.1 385777881 12420212 complement(561703..563328) 1 NC_017304.1 KEGG: cce:Ccel_0044 extracellular solute-binding protein family 5; manually curated; PFAM: extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 563328 12420212 Clo1313_0510 Clostridium thermocellum DSM 1313 family 5 extracellular solute-binding protein YP_005687046.1 561703 R 637887 CDS YP_005687047.1 385777882 12420213 complement(563526..564554) 1 NC_017304.1 SMART: AAA ATPase; manually curated; KEGG: cce:Ccel_0045 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; oligopeptide/dipeptide ABC transporter ATPase 564554 12420213 Clo1313_0511 Clostridium thermocellum DSM 1313 oligopeptide/dipeptide ABC transporter ATPase YP_005687047.1 563526 R 637887 CDS YP_005687048.1 385777883 12420214 complement(564541..565557) 1 NC_017304.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: cce:Ccel_0046 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 565557 12420214 Clo1313_0512 Clostridium thermocellum DSM 1313 oligopeptide/dipeptide ABC transporter ATPase YP_005687048.1 564541 R 637887 CDS YP_005687049.1 385777884 12420215 complement(565628..566683) 1 NC_017304.1 KEGG: cce:Ccel_0047 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 566683 12420215 Clo1313_0513 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005687049.1 565628 R 637887 CDS YP_005687050.1 385777885 12420216 complement(566726..567649) 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0048 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 567649 12420216 Clo1313_0514 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005687050.1 566726 R 637887 CDS YP_005687051.1 385777886 12420217 568051..568797 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: amt:Amet_3565 hypothetical protein; copper amine oxidase-like domain-containing protein 568797 12420217 Clo1313_0515 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687051.1 568051 D 637887 CDS YP_005687052.1 385777887 12420218 569116..570294 1 NC_017304.1 KEGG: cpy:Cphy_2115 major facilitator transporter; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein 570294 12420218 Clo1313_0516 Clostridium thermocellum DSM 1313 major facilitator superfamily protein YP_005687052.1 569116 D 637887 CDS YP_005687053.1 385777888 12420219 complement(570447..571226) 1 NC_017304.1 KEGG: cac:CA_C2657 polyferredoxin; polyferredoxin 571226 12420219 Clo1313_0517 Clostridium thermocellum DSM 1313 polyferredoxin YP_005687053.1 570447 R 637887 CDS YP_005687054.1 385777889 12420220 571619..571993 1 NC_017304.1 KEGG: dhd:Dhaf_2275 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 571993 12420220 Clo1313_0518 Clostridium thermocellum DSM 1313 GntR family transcriptional regulator YP_005687054.1 571619 D 637887 CDS YP_005687055.1 385777890 12420221 571998..572849 1 NC_017304.1 KEGG: cpy:Cphy_3904 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 572849 12420221 Clo1313_0519 Clostridium thermocellum DSM 1313 ABC transporter YP_005687055.1 571998 D 637887 CDS YP_005687056.1 385777891 12420222 572846..573457 1 NC_017304.1 KEGG: ckr:CKR_0333 hypothetical protein; hypothetical protein 573457 12420222 Clo1313_0520 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687056.1 572846 D 637887 CDS YP_005687057.1 385777892 12420223 complement(573532..575583) 1 NC_017304.1 KEGG: cce:Ccel_0750 glycoside hydrolase family 11; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; Dockerin type 1; polysaccharide deacetylase; SMART: cellulose binding type IV; glycoside hydrolase 575583 12420223 Clo1313_0521 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687057.1 573532 R 637887 CDS YP_005687058.1 385777893 12420224 complement(575610..576983) 1 NC_017304.1 KEGG: cce:Ccel_0750 glycoside hydrolase family 11; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV; glycoside hydrolase 576983 12420224 Clo1313_0522 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687058.1 575610 R 637887 CDS YP_005687059.1 385777894 12420225 577350..578051 1 NC_017304.1 KEGG: cbi:CLJ_B0041 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 578051 12420225 Clo1313_0523 Clostridium thermocellum DSM 1313 sugar fermentation stimulation protein YP_005687059.1 577350 D 637887 CDS YP_005687060.1 385777895 12420226 complement(578076..579290) 1 NC_017304.1 KEGG: cce:Ccel_1740 hypothetical protein; hypothetical protein 579290 12420226 Clo1313_0524 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687060.1 578076 R 637887 CDS YP_005687061.1 385777896 12420227 complement(579294..580058) 1 NC_017304.1 KEGG: cce:Ccel_1739 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; RNA polymerase, sigma 28 subunit, SigI 580058 12420227 Clo1313_0525 Clostridium thermocellum DSM 1313 RNA polymerase, sigma 28 subunit, SigI YP_005687061.1 579294 R 637887 CDS YP_005687062.1 385777897 12420228 580410..581780 1 NC_017304.1 KEGG: pfh:PFHG_01537 hypothetical protein similar to erythrocyte binding protein; hypothetical protein 581780 12420228 Clo1313_0526 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687062.1 580410 D 637887 CDS YP_005687063.1 385777898 12420229 581970..582677 1 NC_017304.1 KEGG: cdf:CD0629 putative transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; CarD family transcriptional regulator 582677 12420229 Clo1313_0527 Clostridium thermocellum DSM 1313 CarD family transcriptional regulator YP_005687063.1 581970 D 637887 CDS YP_005687064.1 385777899 12420230 582762..582959 1 NC_017304.1 KEGG: cpy:Cphy_0403 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 582959 12420230 Clo1313_0528 Clostridium thermocellum DSM 1313 4Fe-4S ferredoxin YP_005687064.1 582762 D 637887 CDS YP_005687065.1 385777900 12420231 582994..583584 1 NC_017304.1 KEGG: cdl:CDR20291_0550 hypothetical protein; hypothetical protein 583584 12420231 Clo1313_0529 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687065.1 582994 D 637887 CDS YP_005687066.1 385777901 12420232 complement(583604..584116) 1 NC_017304.1 KEGG: tmt:Tmath_0357 hypothetical protein; hypothetical protein 584116 12420232 Clo1313_0530 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687066.1 583604 R 637887 CDS YP_005687067.1 385777902 12420233 584465..585337 1 NC_017304.1 KEGG: bba:Bd1237 amino-acid ABC transporter; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 585337 12420233 Clo1313_0531 Clostridium thermocellum DSM 1313 family 3 extracellular solute-binding protein YP_005687067.1 584465 D 637887 CDS YP_005687068.1 385777903 12420234 585461..587116 1 NC_017304.1 KEGG: aoe:Clos_2519 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 587116 12420234 Clo1313_0532 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005687068.1 585461 D 637887 CDS YP_005687069.1 385777904 12420236 complement(588541..588891) 1 NC_017304.1 KEGG: dsy:DSY2148 hypothetical protein; hypothetical protein 588891 12420236 Clo1313_0534 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687069.1 588541 R 637887 CDS YP_005687070.1 385777905 12420237 complement(588888..589670) 1 NC_017304.1 KEGG: dsy:DSY2149 hypothetical protein; hypothetical protein 589670 12420237 Clo1313_0535 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687070.1 588888 R 637887 CDS YP_005687071.1 385777906 12420238 complement(589664..590017) 1 NC_017304.1 manually curated; KEGG: dsy:DSY2150 hypothetical protein; hypothetical protein 590017 12420238 Clo1313_0536 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687071.1 589664 R 637887 CDS YP_005687072.1 385777907 12420239 complement(590092..590445) 1 NC_017304.1 KEGG: dfe:Dfer_3408 NAD(P)H dehydrogenase (quinone); hypothetical protein 590445 12420239 Clo1313_0537 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687072.1 590092 R 637887 CDS YP_005687073.1 385777908 12420240 complement(590427..590726) 1 NC_017304.1 KEGG: pkn:PKH_112830 hypothetical protein; hypothetical protein 590726 12420240 Clo1313_0538 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687073.1 590427 R 637887 CDS YP_005687074.1 385777909 12420241 591289..594243 1 NC_017304.1 PFAM: glycosyltransferase 36; KEGG: tnp:Tnap_0603 glycosyltransferase 36; glycosyltransferase 594243 12420241 Clo1313_0539 Clostridium thermocellum DSM 1313 glycosyltransferase YP_005687074.1 591289 D 637887 CDS YP_005687075.1 385777910 12420242 complement(594334..594555) 1 NC_017304.1 KEGG: cce:Ccel_1379 hypothetical protein; hypothetical protein 594555 12420242 Clo1313_0540 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687075.1 594334 R 637887 CDS YP_005687076.1 385777911 12420243 594708..595304 1 NC_017304.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: sth:STH1761 bifunctional methionine sulfoxide reductase A/B protein; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 595304 12420243 Clo1313_0541 Clostridium thermocellum DSM 1313 peptide methionine sulfoxide reductase YP_005687076.1 594708 D 637887 CDS YP_005687077.1 385777912 12420244 595417..597354 1 NC_017304.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase; NADH:flavin oxidoreductase 597354 12420244 Clo1313_0542 Clostridium thermocellum DSM 1313 NADH:flavin oxidoreductase YP_005687077.1 595417 D 637887 CDS YP_005687078.1 385777913 12420245 598077..598601 1 NC_017304.1 KEGG: gau:GAU_3915 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 598601 12420245 Clo1313_0543 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005687078.1 598077 D 637887 CDS YP_005687079.1 385777914 12420246 598672..599718 1 NC_017304.1 KEGG: bcy:Bcer98_2217 VanW family protein; hypothetical protein 599718 12420246 Clo1313_0544 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687079.1 598672 D 637887 CDS YP_005687080.1 385777915 12420247 600178..602202 1 NC_017304.1 KEGG: bmd:BMD_3828 hypothetical protein; hypothetical protein 602202 12420247 Clo1313_0545 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687080.1 600178 D 637887 CDS YP_005687081.1 385777916 12420248 602332..602565 1 NC_017304.1 KEGG: aoe:Clos_0866 hypothetical protein; hypothetical protein 602565 12420248 Clo1313_0546 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687081.1 602332 D 637887 CDS YP_005687082.1 385777917 12420249 602908..603486 1 NC_017304.1 KEGG: rca:Rcas_2023 PfpI family intracellular peptidase; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein; Pfpi family intracellular protease 603486 12420249 Clo1313_0547 Clostridium thermocellum DSM 1313 Pfpi family intracellular protease YP_005687082.1 602908 D 637887 CDS YP_005687083.1 385777918 12420250 603794..604573 1 NC_017304.1 KEGG: tet:TTHERM_00564400 hypothetical protein; hypothetical protein 604573 12420250 Clo1313_0548 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687083.1 603794 D 637887 CDS YP_005687084.1 385777919 12420251 604869..606596 1 NC_017304.1 KEGG: csc:Csac_1116 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 606596 12420251 Clo1313_0549 Clostridium thermocellum DSM 1313 ABC transporter YP_005687084.1 604869 D 637887 CDS YP_005687085.1 385777920 12420252 complement(606697..607269) 1 NC_017304.1 KEGG: cbe:Cbei_1948 hypothetical protein; hypothetical protein 607269 12420252 Clo1313_0550 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687085.1 606697 R 637887 CDS YP_005687086.1 385777921 12420253 607496..608548 1 NC_017304.1 PFAM: phosphate transporter; KEGG: bln:Blon_1635 phosphate transporter; phosphate transporter 608548 12420253 Clo1313_0551 Clostridium thermocellum DSM 1313 phosphate transporter YP_005687086.1 607496 D 637887 CDS YP_005687087.1 385777922 12420254 608602..609225 1 NC_017304.1 PFAM: Putitive phosphate transport regulator; KEGG: bln:Blon_1634 protein of unknown function DUF47; phosphate transport regulator 609225 12420254 Clo1313_0552 Clostridium thermocellum DSM 1313 phosphate transport regulator YP_005687087.1 608602 D 637887 CDS YP_005687088.1 385777923 12420255 609463..610011 1 NC_017304.1 KEGG: spi:MGAS10750_Spy1726 lantibiotic processing peptidase / lantibiotic transport permease protein / lantibiotic transport ATP-binding protein; hypothetical protein 610011 12420255 Clo1313_0553 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687088.1 609463 D 637887 CDS YP_005687089.1 385777924 12420256 complement(610120..613569) 1 NC_017304.1 TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; iron hydrogenase small subunit; KEGG: dhd:Dhaf_2037 hydrogenase, Fe-only; SMART: iron hydrogenase small subunit; hydrogenase, Fe-only 613569 12420256 Clo1313_0554 Clostridium thermocellum DSM 1313 hydrogenase, Fe-only YP_005687089.1 610120 R 637887 CDS YP_005687090.1 385777925 12420257 613874..615145 1 NC_017304.1 KEGG: amt:Amet_4134 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; Peptidoglycan-binding lysin domain 615145 12420257 Clo1313_0555 Clostridium thermocellum DSM 1313 Peptidoglycan-binding lysin domain YP_005687090.1 613874 D 637887 CDS YP_005687091.1 385777926 12420258 complement(615240..616109) 1 NC_017304.1 KEGG: aoe:Clos_1944 peptidoglycan-binding LysM; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein 616109 12420258 Clo1313_0556 Clostridium thermocellum DSM 1313 ErfK/YbiS/YcfS/YnhG family protein YP_005687091.1 615240 R 637887 CDS YP_005687092.1 385777927 12420259 complement(616155..616847) 1 NC_017304.1 KEGG: bts:Btus_1128 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; ErfK/YbiS/YcfS/YnhG family protein; SMART: Peptidoglycan-binding LysM; Peptidoglycan-binding lysin domain 616847 12420259 Clo1313_0557 Clostridium thermocellum DSM 1313 Peptidoglycan-binding lysin domain YP_005687092.1 616155 R 637887 CDS YP_005687093.1 385777928 12420260 complement(617010..617681) 1 NC_017304.1 KEGG: cce:Ccel_0690 manganese and iron superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; Superoxide dismutase 617681 12420260 Clo1313_0558 Clostridium thermocellum DSM 1313 Superoxide dismutase YP_005687093.1 617010 R 637887 CDS YP_005687094.1 385777929 12420261 complement(617908..618201) 1 NC_017304.1 KEGG: act:ACLA_088240 heat shock Hsp30-like protein, putative; hypothetical protein 618201 12420261 Clo1313_0559 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687094.1 617908 R 637887 CDS YP_005687095.1 385777930 12420264 619371..619754 1 NC_017304.1 KEGG: bca:BCE_2318 hypothetical protein; hypothetical protein 619754 12420264 Clo1313_0562 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687095.1 619371 D 637887 CDS YP_005687096.1 385777931 12420265 620229..622121 1 NC_017304.1 KEGG: cce:Ccel_1242 carbohydrate binding family 6; PFAM: Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV; carbohydrate binding family protein 622121 12420265 Clo1313_0563 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005687096.1 620229 D 637887 CDS YP_005687097.1 385777932 12420266 complement(622286..623263) 1 NC_017304.1 manually curated; TIGRFAM: hydrogenase expression/formation protein HypE; KEGG: cpy:Cphy_1741 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE 623263 12420266 Clo1313_0564 Clostridium thermocellum DSM 1313 hydrogenase expression/formation protein HypE YP_005687097.1 622286 R 637887 CDS YP_005687098.1 385777933 12420267 complement(623268..624317) 1 NC_017304.1 KEGG: cpy:Cphy_1740 hydrogenase formation HypD protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 624317 12420267 Clo1313_0565 Clostridium thermocellum DSM 1313 hydrogenase expression/formation protein HypD YP_005687098.1 623268 R 637887 CDS YP_005687099.1 385777934 12420268 complement(624304..624531) 1 NC_017304.1 KEGG: cpy:Cphy_1739 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 624531 12420268 Clo1313_0566 Clostridium thermocellum DSM 1313 hydrogenase assembly chaperone HypC/HupF YP_005687099.1 624304 R 637887 CDS YP_005687100.1 385777935 12420269 complement(624537..626798) 1 NC_017304.1 KEGG: cpy:Cphy_1738 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; (NiFe) hydrogenase maturation protein HypF 626798 12420269 Clo1313_0567 Clostridium thermocellum DSM 1313 (NiFe) hydrogenase maturation protein HypF YP_005687100.1 624537 R 637887 CDS YP_005687101.1 385777936 12420270 complement(626771..627424) 1 NC_017304.1 KEGG: cpy:Cphy_1737 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB 627424 12420270 Clo1313_0568 Clostridium thermocellum DSM 1313 hydrogenase nickel incorporation protein HypB YP_005687101.1 626771 R 637887 CDS YP_005687102.1 385777937 12420271 complement(627440..627778) 1 NC_017304.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: cpy:Cphy_1736 hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 627778 12420271 Clo1313_0569 Clostridium thermocellum DSM 1313 hydrogenase nickel incorporation protein HypA YP_005687102.1 627440 R 637887 CDS YP_005687103.1 385777938 12420272 complement(627723..628109) 1 NC_017304.1 KEGG: cpy:Cphy_1735 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 628109 12420272 Clo1313_0570 Clostridium thermocellum DSM 1313 4Fe-4S ferredoxin YP_005687103.1 627723 R 637887 CDS YP_005687104.1 385777939 12420273 complement(628329..629408) 1 NC_017304.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; nickel-dependent hydrogenase large subunit; KEGG: cpy:Cphy_1734 NADH-ubiquinone oxidoreductase chain 49kDa; NADH-ubiquinone oxidoreductase chain 49kDa 629408 12420273 Clo1313_0571 Clostridium thermocellum DSM 1313 NADH-ubiquinone oxidoreductase chain 49kDa YP_005687104.1 628329 R 637887 CDS YP_005687105.1 385777940 12420274 complement(629401..629760) 1 NC_017304.1 KEGG: cpy:Cphy_1733 ech hydrogenase, subunit EchD, putative; ech hydrogenase subunit EchD 629760 12420274 Clo1313_0572 Clostridium thermocellum DSM 1313 ech hydrogenase subunit EchD YP_005687105.1 629401 R 637887 CDS YP_005687106.1 385777941 12420275 complement(629834..630271) 1 NC_017304.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: cpy:Cphy_1732 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 630271 12420275 Clo1313_0573 Clostridium thermocellum DSM 1313 NADH ubiquinone oxidoreductase 20 kDa subunit YP_005687106.1 629834 R 637887 CDS YP_005687107.1 385777942 12420276 complement(630281..631156) 1 NC_017304.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: cpy:Cphy_1731 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 631156 12420276 Clo1313_0574 Clostridium thermocellum DSM 1313 respiratory-chain NADH dehydrogenase subunit 1 YP_005687107.1 630281 R 637887 CDS YP_005687108.1 385777943 12420277 complement(631153..633063) 1 NC_017304.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; KEGG: cpy:Cphy_1730 NADH dehydrogenase (quinone); NADH-ubiquinone/plastoquinone (complex I) oxidoreductase 633063 12420277 Clo1313_0575 Clostridium thermocellum DSM 1313 NADH-ubiquinone/plastoquinone (complex I) oxidoreductase YP_005687108.1 631153 R 637887 CDS YP_005687109.1 385777944 12420278 complement(633445..633603) 1 NC_017304.1 KEGG: cbr:CBG00650 Hypothetical protein CBG00650; hypothetical protein 633603 12420278 Clo1313_0576 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687109.1 633445 R 637887 CDS YP_005687110.1 385777945 12420279 complement(633757..634239) 1 NC_017304.1 PFAM: transcription elongation factor GreA/GreB domain-containing protein; KEGG: pth:PTH_0541 hypothetical protein; transcription elongation factor GreA/GreB domain-containing protein 634239 12420279 Clo1313_0577 Clostridium thermocellum DSM 1313 transcription elongation factor GreA/GreB domain-containing protein YP_005687110.1 633757 R 637887 CDS YP_005687111.1 385777946 12420280 634743..636113 1 NC_017304.1 PFAM: Citrate synthase; KEGG: dae:Dtox_1989 citrate synthase; Citrate synthase 636113 12420280 Clo1313_0578 Clostridium thermocellum DSM 1313 Citrate synthase YP_005687111.1 634743 D 637887 CDS YP_005687112.1 385777947 12420281 complement(636213..637409) 1 NC_017304.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: pti:PHATRDRAFT_2217 hypothetical protein; pyridoxal-dependent decarboxylase 637409 12420281 Clo1313_0579 Clostridium thermocellum DSM 1313 pyridoxal-dependent decarboxylase YP_005687112.1 636213 R 637887 CDS YP_005687113.1 385777948 12420282 637933..638424 1 NC_017304.1 KEGG: dae:Dtox_0612 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 638424 12420282 Clo1313_0580 Clostridium thermocellum DSM 1313 CheW protein YP_005687113.1 637933 D 637887 CDS YP_005687114.1 385777949 12420283 638556..641054 1 NC_017304.1 KEGG: dae:Dtox_0613 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 641054 12420283 Clo1313_0581 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer with Cache sensor YP_005687114.1 638556 D 637887 CDS YP_005687115.1 385777950 12420284 complement(641118..641534) 1 NC_017304.1 KEGG: phu:Phum_PHUM227370 histone H1-II-1, putative; hypothetical protein 641534 12420284 Clo1313_0582 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687115.1 641118 R 637887 CDS YP_005687116.1 385777951 12420285 641686..642120 1 NC_017304.1 KEGG: nca:Noca_3028 hypothetical protein; hypothetical protein 642120 12420285 Clo1313_0583 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687116.1 641686 D 637887 CDS YP_005687117.1 385777952 12420286 642295..642714 1 NC_017304.1 KEGG: sna:Snas_2969 hypothetical protein; hypothetical protein 642714 12420286 Clo1313_0584 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687117.1 642295 D 637887 CDS YP_005687118.1 385777953 12420287 642714..643166 1 NC_017304.1 KEGG: psl:Psta_2458 hypothetical protein; hypothetical protein 643166 12420287 Clo1313_0585 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687118.1 642714 D 637887 CDS YP_005687119.1 385777954 12420288 complement(643221..644396) 1 NC_017304.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: clj:CLJU_c30610 putative D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 644396 12420288 Clo1313_0586 Clostridium thermocellum DSM 1313 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_005687119.1 643221 R 637887 CDS YP_005687120.1 385777955 12420289 645013..646725 1 NC_017304.1 KEGG: cbl:CLK_1454 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 646725 12420289 Clo1313_0587 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005687120.1 645013 D 637887 CDS YP_005687121.1 385777956 12420290 646812..647450 1 NC_017304.1 PFAM: nitroreductase; KEGG: cce:Ccel_3427 nitroreductase; nitroreductase 647450 12420290 Clo1313_0588 Clostridium thermocellum DSM 1313 nitroreductase YP_005687121.1 646812 D 637887 CDS YP_005687122.1 385777957 12420291 647662..648369 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: pjd:Pjdr2_4965 hypothetical protein; copper amine oxidase-like domain-containing protein 648369 12420291 Clo1313_0589 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687122.1 647662 D 637887 CDS YP_005687123.1 385777958 12420292 648581..651046 1 NC_017304.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cce:Ccel_0601 cell divisionFtsK/SpoIIIE; cell division protein FtsK 651046 12420292 Clo1313_0590 Clostridium thermocellum DSM 1313 cell division protein FtsK YP_005687123.1 648581 D 637887 CDS YP_005687124.1 385777959 12420293 651127..651561 1 NC_017304.1 PFAM: Protein of unknown function DUF2383; KEGG: aoe:Clos_1705 hypothetical protein; hypothetical protein 651561 12420293 Clo1313_0591 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687124.1 651127 D 637887 CDS YP_005687125.1 385777960 12420294 651662..652624 1 NC_017304.1 PFAM: UbiA prenyltransferase; KEGG: gym:GYMC10_2196 1,4-dihydroxy-2-naphthoate octaprenyltransferase; UbiA prenyltransferase 652624 12420294 Clo1313_0592 Clostridium thermocellum DSM 1313 UbiA prenyltransferase YP_005687125.1 651662 D 637887 CDS YP_005687126.1 385777961 12420295 652988..653809 1 NC_017304.1 KEGG: hor:Hore_08350 hypothetical protein; hypothetical protein 653809 12420295 Clo1313_0593 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687126.1 652988 D 637887 CDS YP_005687127.1 385777962 12420296 654053..654691 1 NC_017304.1 KEGG: csc:Csac_0369 calcium-translocating P-type ATPase, PMCA-type; hypothetical protein 654691 12420296 Clo1313_0594 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687127.1 654053 D 637887 CDS YP_005687128.1 385777963 12420297 654821..655570 1 NC_017304.1 PFAM: protein of unknown function DUF975; KEGG: aoe:Clos_0135 hypothetical protein; hypothetical protein 655570 12420297 Clo1313_0595 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687128.1 654821 D 637887 CDS YP_005687129.1 385777964 12420298 655736..656185 1 NC_017304.1 KEGG: aoe:Clos_2578 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; FHA domain-containing protein 656185 12420298 Clo1313_0596 Clostridium thermocellum DSM 1313 FHA domain-containing protein YP_005687129.1 655736 D 637887 CDS YP_005687130.1 385777965 12420299 656197..657465 1 NC_017304.1 PFAM: cell cycle protein; KEGG: aoe:Clos_2577 cell cycle protein; cell cycle protein 657465 12420299 Clo1313_0597 Clostridium thermocellum DSM 1313 cell cycle protein YP_005687130.1 656197 D 637887 CDS YP_005687131.1 385777966 12420300 657458..658870 1 NC_017304.1 KEGG: aoe:Clos_2576 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase 658870 12420300 Clo1313_0598 Clostridium thermocellum DSM 1313 peptidoglycan glycosyltransferase YP_005687131.1 657458 D 637887 CDS YP_005687132.1 385777967 12420301 658973..659638 1 NC_017304.1 KEGG: nde:NIDE2507 DNA repair protein RadC-like protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC 659638 12420301 Clo1313_0599 Clostridium thermocellum DSM 1313 DNA repair protein RadC YP_005687132.1 658973 D 637887 CDS YP_005687133.1 385777968 12420302 complement(660301..662076) 1 NC_017304.1 KEGG: mba:Mbar_A2604 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 662076 12420302 Clo1313_0600 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687133.1 660301 R 637887 CDS YP_005687134.1 385777969 12420303 662402..664585 1 NC_017304.1 KEGG: cbe:Cbei_1606 fibronectin, type III domain-containing protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; fibronectin type III domain-containing protein 664585 12420303 Clo1313_0601 Clostridium thermocellum DSM 1313 fibronectin type III domain-containing protein YP_005687134.1 662402 D 637887 CDS YP_005687135.1 385777970 12420304 664651..665874 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 665874 12420304 Clo1313_0602 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687135.1 664651 D 637887 CDS YP_005687136.1 385777971 12420305 666245..675166 1 NC_017304.1 TIGRFAM: YD repeat protein; PFAM: Kelch repeat type 1-containing protein; YD repeat-containing protein; MORN variant repeat-containing protein; KEGG: lmh:LMHCC_2776 YD repeat protein; SMART: Kelch repeat type 1-containing protein; YD repeat protein 675166 12420305 Clo1313_0603 Clostridium thermocellum DSM 1313 YD repeat protein YP_005687136.1 666245 D 637887 CDS YP_005687137.1 385777972 12420306 675166..675723 1 NC_017304.1 KEGG: ava:Ava_1697 hypothetical protein; hypothetical protein 675723 12420306 Clo1313_0604 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687137.1 675166 D 637887 CDS YP_005687138.1 385777973 12420307 675837..676226 1 NC_017304.1 KEGG: ele:Elen_2720 (p)ppGpp synthetase I, SpoT/RelA; hypothetical protein 676226 12420307 Clo1313_0605 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687138.1 675837 D 637887 CDS YP_005687139.1 385777974 12420308 676219..676356 1 NC_017304.1 KEGG: cbb:CLD_2459 hypothetical protein; hypothetical protein 676356 12420308 Clo1313_0606 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687139.1 676219 D 637887 CDS YP_005687140.1 385777975 12420311 complement(679003..679482) 1 NC_017304.1 manually curated; KEGG: tdn:Suden_1217 hypothetical protein; hypothetical protein 679482 12420311 Clo1313_0609 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687140.1 679003 R 637887 CDS YP_005687141.1 385777976 12420312 679715..680254 1 NC_017304.1 KEGG: bbe:BBR47_35980 probable RNA 2'-phosphotransferase; manually curated; PFAM: phosphotransferase KptA/Tpt1; phosphotransferase KptA/Tpt1 680254 12420312 Clo1313_0610 Clostridium thermocellum DSM 1313 phosphotransferase KptA/Tpt1 YP_005687141.1 679715 D 637887 CDS YP_005687142.1 385777977 12420313 680477..680719 1 NC_017304.1 manually curated; KEGG: bhy:BHWA1_00897 hypothetical protein; hypothetical protein 680719 12420313 Clo1313_0611 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687142.1 680477 D 637887 CDS YP_005687143.1 385777978 12420314 681439..682821 1 NC_017304.1 KEGG: cbf:CLI_2855 methyl-accepting chemotaxis protein; hypothetical protein 682821 12420314 Clo1313_0612 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687143.1 681439 D 637887 CDS YP_005687144.1 385777979 12420315 682941..683903 1 NC_017304.1 KEGG: bsu:BSU03180 S-deacylase; PFAM: Acetyl xylan esterase; cephalosporin-C deacetylase 683903 12420315 Clo1313_0613 Clostridium thermocellum DSM 1313 cephalosporin-C deacetylase YP_005687144.1 682941 D 637887 CDS YP_005687145.1 385777980 12420319 689586..691193 1 NC_017304.1 PFAM: polysaccharide biosynthesis protein; KEGG: clj:CLJU_c17360 putative stage V sporulation protein B; polysaccharide biosynthesis protein 691193 12420319 Clo1313_0614 Clostridium thermocellum DSM 1313 polysaccharide biosynthesis protein YP_005687145.1 689586 D 637887 CDS YP_005687146.1 385777981 12420320 691416..692657 1 NC_017304.1 KEGG: dhd:Dhaf_2923 hypothetical protein; hypothetical protein 692657 12420320 Clo1313_0615 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687146.1 691416 D 637887 CDS YP_005687147.1 385777982 12420321 692758..693483 1 NC_017304.1 KEGG: ctc:CTC01493 transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 693483 12420321 Clo1313_0616 Clostridium thermocellum DSM 1313 ABC transporter YP_005687147.1 692758 D 637887 CDS YP_005687148.1 385777983 12420322 693470..694222 1 NC_017304.1 KEGG: ctc:CTC01492 membrane spanning protein; membrane spanning protein 694222 12420322 Clo1313_0617 Clostridium thermocellum DSM 1313 membrane spanning protein YP_005687148.1 693470 D 637887 CDS YP_005687149.1 385777984 12420323 694253..695692 1 NC_017304.1 KEGG: ctc:CTC01491 sensory transduction protein kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 695692 12420323 Clo1313_0618 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005687149.1 694253 D 637887 CDS YP_005687150.1 385777985 12420324 695710..696402 1 NC_017304.1 KEGG: dhd:Dhaf_2918 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 696402 12420324 Clo1313_0619 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005687150.1 695710 D 637887 CDS YP_005687151.1 385777986 12420325 696551..697141 1 NC_017304.1 KEGG: aoe:Clos_2858 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; sporulation protein YyaC 697141 12420325 Clo1313_0620 Clostridium thermocellum DSM 1313 sporulation protein YyaC YP_005687151.1 696551 D 637887 CDS YP_005687152.1 385777987 12420326 697438..697614 1 NC_017304.1 PFAM: protein of unknown function DUF1540; KEGG: cce:Ccel_2311 protein of unknown function DUF1540; hypothetical protein 697614 12420326 Clo1313_0621 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687152.1 697438 D 637887 CDS YP_005687153.1 385777988 12420327 complement(698080..698841) 1 NC_017304.1 PFAM: acyl-ACP thioesterase; KEGG: tjr:TherJR_2397 acyl-ACP thioesterase; acyl-ACP thioesterase 698841 12420327 Clo1313_0622 Clostridium thermocellum DSM 1313 acyl-ACP thioesterase YP_005687153.1 698080 R 637887 CDS YP_005687154.1 385777989 12420328 699008..699679 1 NC_017304.1 KEGG: rba:RB10370 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 699679 12420328 Clo1313_0623 Clostridium thermocellum DSM 1313 HAD-superfamily hydrolase YP_005687154.1 699008 D 637887 CDS YP_005687155.1 385777990 12420329 699695..700615 1 NC_017304.1 KEGG: cbk:CLL_A0068 HAD superfamily hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 700615 12420329 Clo1313_0624 Clostridium thermocellum DSM 1313 cof family hydrolase YP_005687155.1 699695 D 637887 CDS YP_005687156.1 385777991 12420330 700581..702197 1 NC_017304.1 KEGG: syp:SYNPCC7002_A2872 von Willebrand factor type A domain-containing protein; PFAM: Protein of unknown function DUF3520; Uncharacterised protein family YfbK-like; von Willebrand factor type A; SMART: von Willebrand factor type A; hypothetical protein 702197 12420330 Clo1313_0625 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687156.1 700581 D 637887 CDS YP_005687157.1 385777992 12420331 702391..703683 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: dhd:Dhaf_1782 radical SAM domain protein; radical SAM protein 703683 12420331 Clo1313_0626 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687157.1 702391 D 637887 CDS YP_005687158.1 385777993 12420332 704614..708672 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; type 3a cellulose-binding domain protein; KEGG: cce:Ccel_0728 cellulosome anchoring protein cohesin region; cellulosome anchoring protein cohesin subunit 708672 12420332 Clo1313_0627 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005687158.1 704614 D 637887 CDS YP_005687159.1 385777994 12420333 708824..713671 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: lel:LELG_02536 hypothetical protein; cellulosome anchoring protein cohesin subunit 713671 12420333 Clo1313_0628 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005687159.1 708824 D 637887 CDS YP_005687160.1 385777995 12420334 714344..716410 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: lsp:Bsph_2088 cell surface glycoprotein 2 precursor (S-layer protein 2); cellulosome anchoring protein cohesin subunit 716410 12420334 Clo1313_0629 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005687160.1 714344 D 637887 CDS YP_005687161.1 385777996 12420335 716463..717800 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: gym:GYMC10_4794 legume lectin beta domain protein; cellulosome anchoring protein cohesin subunit 717800 12420335 Clo1313_0630 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005687161.1 716463 D 637887 CDS YP_005687162.1 385777997 12420336 complement(717897..718739) 1 NC_017304.1 KEGG: cno:NT01CX_1704 transglutaminase-like enzyme, putative cysteine protease; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; transglutaminase domain-containing protein 718739 12420336 Clo1313_0631 Clostridium thermocellum DSM 1313 transglutaminase domain-containing protein YP_005687162.1 717897 R 637887 CDS YP_005687163.1 385777998 12420337 719356..719559 1 NC_017304.1 KEGG: cbe:Cbei_2154 EmrB/QacA family drug resistance transporter; EmrB/QacA family drug resistance transporter 719559 12420337 Clo1313_0632 Clostridium thermocellum DSM 1313 EmrB/QacA family drug resistance transporter YP_005687163.1 719356 D 637887 CDS YP_005687164.1 385777999 12420338 719718..719999 1 NC_017304.1 KEGG: sul:SYO3AOP1_1521 transglutaminase domain protein; hypothetical protein 719999 12420338 Clo1313_0633 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687164.1 719718 D 637887 CDS YP_005687165.1 385778000 12420339 complement(719996..721132) 1 NC_017304.1 KEGG: bbe:BBR47_55320 hypothetical protein; PFAM: RNA methylase; THUMP domain-containing protein; rRNA (guanine-N(2)-)-methyltransferase 721132 12420339 Clo1313_0634 Clostridium thermocellum DSM 1313 rRNA (guanine-N(2)-)-methyltransferase YP_005687165.1 719996 R 637887 CDS YP_005687166.1 385778001 12420340 complement(721251..722177) 1 NC_017304.1 KEGG: clj:CLJU_c29210 putative transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 722177 12420340 Clo1313_0635 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005687166.1 721251 R 637887 CDS YP_005687167.1 385778002 12420341 722391..723662 1 NC_017304.1 KEGG: cce:Ccel_2428 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 723662 12420341 Clo1313_0636 Clostridium thermocellum DSM 1313 3-phosphoshikimate 1-carboxyvinyltransferase YP_005687167.1 722391 D 637887 CDS YP_005687168.1 385778003 12420342 723810..724619 1 NC_017304.1 TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; KEGG: ctc:CTC01569 stage 0 sporulation protein A; SMART: response regulator receiver; sporulation transcriptional activator Spo0A 724619 12420342 Clo1313_0637 Clostridium thermocellum DSM 1313 sporulation transcriptional activator Spo0A YP_005687168.1 723810 D 637887 CDS YP_005687169.1 385778004 12420343 complement(724679..724954) 1 NC_017304.1 KEGG: cce:Ccel_2424 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein 724954 12420343 Clo1313_0638 Clostridium thermocellum DSM 1313 histone family protein DNA-binding protein YP_005687169.1 724679 R 637887 CDS YP_005687170.1 385778005 12420344 complement(725146..725556) 1 NC_017304.1 PFAM: UspA domain-containing protein; KEGG: cce:Ccel_2423 UspA domain protein; UspA domain-containing protein 725556 12420344 Clo1313_0639 Clostridium thermocellum DSM 1313 UspA domain-containing protein YP_005687170.1 725146 R 637887 CDS YP_005687171.1 385778006 12420345 725868..726710 1 NC_017304.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: cce:Ccel_2422 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 726710 12420345 Clo1313_0640 Clostridium thermocellum DSM 1313 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_005687171.1 725868 D 637887 CDS YP_005687172.1 385778007 12420346 726741..727298 1 NC_017304.1 KEGG: cce:Ccel_2421 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 727298 12420346 Clo1313_0641 Clostridium thermocellum DSM 1313 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta YP_005687172.1 726741 D 637887 CDS YP_005687173.1 385778008 12420347 727434..727640 1 NC_017304.1 PFAM: Domain of unknown function DUF1858; KEGG: cce:Ccel_2420 hypothetical protein; hypothetical protein 727640 12420347 Clo1313_0642 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687173.1 727434 D 637887 CDS YP_005687174.1 385778009 12420348 728108..729382 1 NC_017304.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: cce:Ccel_2419 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase 729382 12420348 Clo1313_0643 Clostridium thermocellum DSM 1313 adenylosuccinate synthetase YP_005687174.1 728108 D 637887 CDS YP_005687175.1 385778010 12420354 730457..730933 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 730933 12420354 Clo1313_0644 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005687175.1 730457 D 637887 CDS YP_005687176.1 385778011 12420355 complement(731235..732209) 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: geo:Geob_0317 glycosyl transferase family 2; family 2 glycosyl transferase 732209 12420355 Clo1313_0645 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005687176.1 731235 R 637887 CDS YP_005687177.1 385778012 12420356 complement(732234..735140) 1 NC_017304.1 PFAM: glycosyl transferase family 39; coagulation factor 5/8 type domain protein; KEGG: geo:Geob_0316 glycosyl transferase family 39; glycosyl transferase family protein 735140 12420356 Clo1313_0646 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005687177.1 732234 R 637887 CDS YP_005687178.1 385778013 12420357 complement(735339..736274) 1 NC_017304.1 KEGG: cce:Ccel_0881 carbohydrate-binding, CenC-like protein; hypothetical protein 736274 12420357 Clo1313_0647 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687178.1 735339 R 637887 CDS YP_005687179.1 385778014 12420358 complement(736405..737370) 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: dhd:Dhaf_2535 glycosyl transferase family 2; family 2 glycosyl transferase 737370 12420358 Clo1313_0648 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005687179.1 736405 R 637887 CDS YP_005687180.1 385778015 12420359 complement(737499..737849) 1 NC_017304.1 KEGG: mta:Moth_2227 hypothetical protein; hypothetical protein 737849 12420359 Clo1313_0649 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687180.1 737499 R 637887 CDS YP_005687181.1 385778016 12420360 complement(737863..738561) 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: mta:Moth_2228 glycosyl transferase family protein; family 2 glycosyl transferase 738561 12420360 Clo1313_0650 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005687181.1 737863 R 637887 CDS YP_005687182.1 385778017 12420361 738762..739604 1 NC_017304.1 TIGRFAM: diaminopimelate epimerase; KEGG: mmq:MmarC5_0724 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 739604 12420361 Clo1313_0651 Clostridium thermocellum DSM 1313 diaminopimelate epimerase YP_005687182.1 738762 D 637887 CDS YP_005687183.1 385778018 12420362 739694..740926 1 NC_017304.1 KEGG: dae:Dtox_2324 L,L-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II; LL-diaminopimelate aminotransferase 740926 12420362 Clo1313_0652 Clostridium thermocellum DSM 1313 LL-diaminopimelate aminotransferase YP_005687183.1 739694 D 637887 CDS YP_005687184.1 385778019 12420363 741037..741972 1 NC_017304.1 KEGG: cpr:CPR_2090 transcription regulator LytR-like protein; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 741972 12420363 Clo1313_0653 Clostridium thermocellum DSM 1313 cell envelope-related transcriptional attenuator YP_005687184.1 741037 D 637887 CDS YP_005687185.1 385778020 12420364 742116..743102 1 NC_017304.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dae:Dtox_3625 2-hydroxyglutaryl-CoA dehydratase D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 743102 12420364 Clo1313_0654 Clostridium thermocellum DSM 1313 2-hydroxyglutaryl-CoA dehydratase subunit D YP_005687185.1 742116 D 637887 CDS YP_005687186.1 385778021 12420365 743163..743942 1 NC_017304.1 KEGG: cbi:CLJ_B1663 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 743942 12420365 Clo1313_0655 Clostridium thermocellum DSM 1313 CoA-substrate-specific enzyme activase YP_005687186.1 743163 D 637887 CDS YP_005687187.1 385778022 12420366 744234..744902 1 NC_017304.1 KEGG: dsy:DSY2055 hypothetical protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; exsB protein 744902 12420366 Clo1313_0656 Clostridium thermocellum DSM 1313 exsB protein YP_005687187.1 744234 D 637887 CDS YP_005687188.1 385778023 12420367 744934..745317 1 NC_017304.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: tte:TTE2368 6-pyruvoyl-tetrahydropterin synthase; 6-pyruvoyl-tetrahydropterin synthase 745317 12420367 Clo1313_0657 Clostridium thermocellum DSM 1313 6-pyruvoyl-tetrahydropterin synthase YP_005687188.1 744934 D 637887 CDS YP_005687189.1 385778024 12420368 745343..745975 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: bts:Btus_0458 radical SAM domain protein; radical SAM protein 745975 12420368 Clo1313_0658 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687189.1 745343 D 637887 CDS YP_005687190.1 385778025 12420369 745981..746550 1 NC_017304.1 KEGG: cce:Ccel_2416 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein 746550 12420369 Clo1313_0659 Clostridium thermocellum DSM 1313 phage SPO1 DNA polymerase-like protein YP_005687190.1 745981 D 637887 CDS YP_005687191.1 385778026 12420370 746529..747107 1 NC_017304.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: cce:Ccel_2415 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 747107 12420370 Clo1313_0660 Clostridium thermocellum DSM 1313 uracil-DNA glycosylase YP_005687191.1 746529 D 637887 CDS YP_005687192.1 385778027 12420376 753165..753929 1 NC_017304.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: eel:EUBELI_00047 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 753929 12420376 Clo1313_0661 Clostridium thermocellum DSM 1313 UBA/THIF-type NAD/FAD binding protein YP_005687192.1 753165 D 637887 CDS YP_005687193.1 385778028 12420377 754114..754590 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 754590 12420377 Clo1313_0662 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005687193.1 754114 D 637887 CDS YP_005687194.1 385778029 12420378 754881..755360 1 NC_017304.1 KEGG: dae:Dtox_2165 hypothetical protein; hypothetical protein 755360 12420378 Clo1313_0663 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687194.1 754881 D 637887 CDS YP_005687195.1 385778030 12420379 755385..755507 1 NC_017304.1 hypothetical protein 755507 12420379 Clo1313_0664 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687195.1 755385 D 637887 CDS YP_005687196.1 385778031 12420380 755678..756670 1 NC_017304.1 PFAM: glycosidase related protein; KEGG: psl:Psta_1702 glycosidase PH1107-related protein; glycosidase-like protein 756670 12420380 Clo1313_0665 Clostridium thermocellum DSM 1313 glycosidase-like protein YP_005687196.1 755678 D 637887 CDS YP_005687197.1 385778032 12420381 756735..757778 1 NC_017304.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: tte:TTE0065 nucleoside-diphosphate-sugar pyrophosphorylase; nucleotidyltransferase 757778 12420381 Clo1313_0666 Clostridium thermocellum DSM 1313 nucleotidyltransferase YP_005687197.1 756735 D 637887 CDS YP_005687198.1 385778033 12420382 757947..759122 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: tex:Teth514_1786 glycosyl transferase, group 1; group 1 glycosyl transferase 759122 12420382 Clo1313_0667 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005687198.1 757947 D 637887 CDS YP_005687199.1 385778034 12420383 759119..760132 1 NC_017304.1 manually curated; KEGG: tit:Thit_0057 hypothetical protein; hypothetical protein 760132 12420383 Clo1313_0668 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687199.1 759119 D 637887 CDS YP_005687200.1 385778035 12420384 760257..761348 1 NC_017304.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: cce:Ccel_1179 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase 761348 12420384 Clo1313_0669 Clostridium thermocellum DSM 1313 mannose-6-phosphate isomerase YP_005687200.1 760257 D 637887 CDS YP_005687201.1 385778036 12420385 761469..762224 1 NC_017304.1 PFAM: zinc/iron permease; KEGG: ctc:CTC01320 GufA protein; zinc/iron permease 762224 12420385 Clo1313_0670 Clostridium thermocellum DSM 1313 zinc/iron permease YP_005687201.1 761469 D 637887 CDS YP_005687202.1 385778037 12420386 762394..762783 1 NC_017304.1 KEGG: cbe:Cbei_2338 hemerythrin-like metal-binding protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 762783 12420386 Clo1313_0671 Clostridium thermocellum DSM 1313 hemerythrin-like metal-binding protein YP_005687202.1 762394 D 637887 CDS YP_005687203.1 385778038 12420387 762808..763470 1 NC_017304.1 PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein; KEGG: brm:Bmur_1335 flavin reductase domain protein FMN-binding protein; flavin reductase domain-containing FMN-binding protein 763470 12420387 Clo1313_0672 Clostridium thermocellum DSM 1313 flavin reductase domain-containing FMN-binding protein YP_005687203.1 762808 D 637887 CDS YP_005687204.1 385778039 12420388 763590..767117 1 NC_017304.1 KEGG: cbl:CLK_0631 pyruvate ferredoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate ferredoxin/flavodoxin oxidoreductase 767117 12420388 Clo1313_0673 Clostridium thermocellum DSM 1313 pyruvate ferredoxin/flavodoxin oxidoreductase YP_005687204.1 763590 D 637887 CDS YP_005687205.1 385778040 12420389 complement(767215..767382) 1 NC_017304.1 manually curated; KEGG: cbi:CLJ_B1233 hypothetical protein; hypothetical protein 767382 12420389 Clo1313_0674 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687205.1 767215 R 637887 CDS YP_005687206.1 385778041 12420390 767708..770212 1 NC_017304.1 KEGG: ere:EUBREC_0268 carbohydrate-binding Module family 2 candidate secreted modular protein with two N-terminal CBM2 domains; manually curated; PFAM: S-layer domain-containing protein; von Willebrand factor type A; S-layer protein 770212 12420390 Clo1313_0675 Clostridium thermocellum DSM 1313 S-layer protein YP_005687206.1 767708 D 637887 CDS YP_005687207.1 385778042 12420391 770252..773713 1 NC_017304.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ere:EUBREC_0268 carbohydrate-binding Module family 2 candidate secreted modular protein with two N-terminal CBM2 domains; peptidoglycan-binding domain-containing protein 773713 12420391 Clo1313_0676 Clostridium thermocellum DSM 1313 peptidoglycan-binding domain-containing protein YP_005687207.1 770252 D 637887 CDS YP_005687208.1 385778043 12420392 773953..775590 1 NC_017304.1 PFAM: AMP-dependent synthetase and ligase; KEGG: swo:Swol_1180 hypothetical protein; AMP-dependent synthetase and ligase 775590 12420392 Clo1313_0677 Clostridium thermocellum DSM 1313 AMP-dependent synthetase and ligase YP_005687208.1 773953 D 637887 CDS YP_005687209.1 385778044 12420393 775939..776388 1 NC_017304.1 PFAM: heat shock protein Hsp20; KEGG: tjr:TherJR_0910 heat shock protein HSP20; heat shock protein Hsp20 776388 12420393 Clo1313_0678 Clostridium thermocellum DSM 1313 heat shock protein Hsp20 YP_005687209.1 775939 D 637887 CDS YP_005687210.1 385778045 12420394 776607..777518 1 NC_017304.1 KEGG: clj:CLJU_c15020 putative NUDIX hydrolase; manually curated; PFAM: NUDIX hydrolase; NUDIX hydrolase 777518 12420394 Clo1313_0679 Clostridium thermocellum DSM 1313 NUDIX hydrolase YP_005687210.1 776607 D 637887 CDS YP_005687211.1 385778046 12420395 777646..779034 1 NC_017304.1 PFAM: peptidase M56 BlaR1; KEGG: ckr:CKR_3089 hypothetical protein; peptidase M56 BlaR1 779034 12420395 Clo1313_0680 Clostridium thermocellum DSM 1313 peptidase M56 BlaR1 YP_005687211.1 777646 D 637887 CDS YP_005687212.1 385778047 12420396 779513..780850 1 NC_017304.1 KEGG: brm:Bmur_0669 hypothetical protein; hypothetical protein 780850 12420396 Clo1313_0681 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687212.1 779513 D 637887 CDS YP_005687213.1 385778048 12420397 780923..782035 1 NC_017304.1 PFAM: Citrate transporter; KEGG: eel:EUBELI_00346 hypothetical protein; citrate transporter 782035 12420397 Clo1313_0682 Clostridium thermocellum DSM 1313 citrate transporter YP_005687213.1 780923 D 637887 CDS YP_005687214.1 385778049 12420398 782206..782940 1 NC_017304.1 KEGG: mac:MA2453 hypothetical protein; hypothetical protein 782940 12420398 Clo1313_0683 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687214.1 782206 D 637887 CDS YP_005687215.1 385778050 12420399 783116..784813 1 NC_017304.1 KEGG: gym:GYMC10_0353 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor type A 784813 12420399 Clo1313_0684 Clostridium thermocellum DSM 1313 von Willebrand factor type A YP_005687215.1 783116 D 637887 CDS YP_005687216.1 385778051 12420400 785118..786353 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: gym:GYMC10_0203 S-layer domain protein; Dockerin type 1 786353 12420400 Clo1313_0685 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005687216.1 785118 D 637887 CDS YP_005687217.1 385778052 12420401 786438..787247 1 NC_017304.1 KEGG: cbf:CLI_0921 non-haem haloperoxidase family protein; manually curated; PFAM: alpha/beta hydrolase fold; alpha/beta fold family hydrolase 787247 12420401 Clo1313_0686 Clostridium thermocellum DSM 1313 alpha/beta fold family hydrolase YP_005687217.1 786438 D 637887 CDS YP_005687218.1 385778053 12420403 787661..787993 1 NC_017304.1 KEGG: amt:Amet_2242 hypothetical protein; hypothetical protein 787993 12420403 Clo1313_0688 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687218.1 787661 D 637887 CDS YP_005687219.1 385778054 12420404 complement(788322..790139) 1 NC_017304.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Dockerin type 1; KEGG: ter:Tery_0117 peptidase S8/S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 790139 12420404 Clo1313_0689 Clostridium thermocellum DSM 1313 peptidase S8 and S53 subtilisin kexin sedolisin YP_005687219.1 788322 R 637887 CDS YP_005687220.1 385778055 12420405 790250..790414 1 NC_017304.1 hypothetical protein 790414 12420405 Clo1313_0690 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687220.1 790250 D 637887 CDS YP_005687221.1 385778056 12420406 complement(791059..791619) 1 NC_017304.1 KEGG: coc:Coch_0119 hypothetical protein; hypothetical protein 791619 12420406 Clo1313_0691 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687221.1 791059 R 637887 CDS YP_005687222.1 385778057 12420407 complement(791646..792284) 1 NC_017304.1 PFAM: regulatory protein TetR; KEGG: amt:Amet_4671 TetR family transcriptional regulator; TetR family transcriptional regulator 792284 12420407 Clo1313_0692 Clostridium thermocellum DSM 1313 TetR family transcriptional regulator YP_005687222.1 791646 R 637887 CDS YP_005687223.1 385778058 12420408 792550..795045 1 NC_017304.1 PFAM: Carbohydrate binding family 6; Dockerin type 1; lipolytic protein G-D-S-L family; KEGG: bsu:BSU39120 putative esterase (lipoprotein); carbohydrate binding family protein 795045 12420408 Clo1313_0693 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005687223.1 792550 D 637887 CDS YP_005687224.1 385778059 12420409 795263..795751 1 NC_017304.1 manually curated; KEGG: aoe:Clos_0774 hypothetical protein; hypothetical protein 795751 12420409 Clo1313_0694 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687224.1 795263 D 637887 CDS YP_005687225.1 385778060 12420411 797330..797692 1 NC_017304.1 PFAM: Penicillinase repressor; KEGG: dsy:DSY1014 hypothetical protein; penicillinase repressor 797692 12420411 Clo1313_0696 Clostridium thermocellum DSM 1313 penicillinase repressor YP_005687225.1 797330 D 637887 CDS YP_005687226.1 385778061 12420412 797695..799881 1 NC_017304.1 PFAM: peptidase M56 BlaR1; KEGG: dae:Dtox_2651 hypothetical protein; peptidase M56 BlaR1 799881 12420412 Clo1313_0697 Clostridium thermocellum DSM 1313 peptidase M56 BlaR1 YP_005687226.1 797695 D 637887 CDS YP_005687227.1 385778062 12420413 800268..802013 1 NC_017304.1 KEGG: cpy:Cphy_1237 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 802013 12420413 Clo1313_0698 Clostridium thermocellum DSM 1313 ABC transporter YP_005687227.1 800268 D 637887 CDS YP_005687228.1 385778063 12420414 802003..803901 1 NC_017304.1 KEGG: cpy:Cphy_1238 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 803901 12420414 Clo1313_0699 Clostridium thermocellum DSM 1313 ABC transporter YP_005687228.1 802003 D 637887 CDS YP_005687229.1 385778064 12420415 804081..805523 1 NC_017304.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: bpo:BP951000_1612 Xaa His dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 805523 12420415 Clo1313_0700 Clostridium thermocellum DSM 1313 aminoacyl-histidine dipeptidase YP_005687229.1 804081 D 637887 CDS YP_005687230.1 385778065 12420416 805835..806890 1 NC_017304.1 manually curated; TIGRFAM: cobalamin biosynthesis protein CobD; KEGG: tte:TTE0377 cobalamin biosynthesis protein CobD/CbiB; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD 806890 12420416 Clo1313_0701 Clostridium thermocellum DSM 1313 cobalamin biosynthesis protein CobD YP_005687230.1 805835 D 637887 CDS YP_005687231.1 385778066 12420417 807038..807601 1 NC_017304.1 manually curated; KEGG: cac:CA_C1383 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; adenosylcobinamide-phosphate guanylyltransferase 807601 12420417 Clo1313_0702 Clostridium thermocellum DSM 1313 adenosylcobinamide-phosphate guanylyltransferase YP_005687231.1 807038 D 637887 CDS YP_005687232.1 385778067 12420418 807617..808363 1 NC_017304.1 manually curated; TIGRFAM: cobalamin 5'-phosphate synthase; KEGG: cac:CA_C1384 cobalamin synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 808363 12420418 Clo1313_0703 Clostridium thermocellum DSM 1313 cobalamin 5'-phosphate synthase YP_005687232.1 807617 D 637887 CDS YP_005687233.1 385778068 12420419 808405..808995 1 NC_017304.1 KEGG: ckr:CKR_0654 hypothetical protein; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; alpha-ribazole phosphatase 808995 12420419 Clo1313_0704 Clostridium thermocellum DSM 1313 alpha-ribazole phosphatase YP_005687233.1 808405 D 637887 CDS YP_005687234.1 385778069 12420420 809136..809687 1 NC_017304.1 KEGG: ate:Athe_1767 protein of unknown function DUF1393; hypothetical protein 809687 12420420 Clo1313_0705 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687234.1 809136 D 637887 CDS YP_005687235.1 385778070 12420421 809828..810562 1 NC_017304.1 KEGG: tte:TTE0940 beta-lactamase superfamily hydrolase; beta-lactamase superfamily hydrolase 810562 12420421 Clo1313_0706 Clostridium thermocellum DSM 1313 beta-lactamase superfamily hydrolase YP_005687235.1 809828 D 637887 CDS YP_005687236.1 385778071 12420422 complement(810795..812045) 1 NC_017304.1 KEGG: cce:Ccel_2179 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 812045 12420422 Clo1313_0707 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005687236.1 810795 R 637887 CDS YP_005687237.1 385778072 12420423 812384..813763 1 NC_017304.1 PFAM: pyruvate carboxyltransferase; KEGG: cce:Ccel_2177 pyruvate carboxyltransferase; pyruvate carboxyltransferase 813763 12420423 Clo1313_0708 Clostridium thermocellum DSM 1313 pyruvate carboxyltransferase YP_005687237.1 812384 D 637887 CDS YP_005687238.1 385778073 12420424 813794..815722 1 NC_017304.1 KEGG: cce:Ccel_2176 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain-containing protein; aconitate hydratase 815722 12420424 Clo1313_0709 Clostridium thermocellum DSM 1313 aconitate hydratase YP_005687238.1 813794 D 637887 CDS YP_005687239.1 385778074 12420425 815771..816442 1 NC_017304.1 manually curated; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: cce:Ccel_2175 transcriptional regulator, GntR family; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 816442 12420425 Clo1313_0710 Clostridium thermocellum DSM 1313 GntR family transcriptional regulator YP_005687239.1 815771 D 637887 CDS YP_005687240.1 385778075 12420426 816523..817893 1 NC_017304.1 KEGG: cce:Ccel_2172 RNA methylase, NOL1/NOP2/sun family; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; RNA methylase 817893 12420426 Clo1313_0711 Clostridium thermocellum DSM 1313 RNA methylase YP_005687240.1 816523 D 637887 CDS YP_005687241.1 385778076 12420427 818023..818757 1 NC_017304.1 KEGG: bcy:Bcer98_3369 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 818757 12420427 Clo1313_0712 Clostridium thermocellum DSM 1313 pseudouridine synthase YP_005687241.1 818023 D 637887 CDS YP_005687242.1 385778077 12420428 818851..820020 1 NC_017304.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: cce:Ccel_2170 SAM dependent methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 820020 12420428 Clo1313_0713 Clostridium thermocellum DSM 1313 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005687242.1 818851 D 637887 CDS YP_005687243.1 385778078 12420429 820431..820922 1 NC_017304.1 PFAM: Carbohydrate binding family 25; KEGG: cce:Ccel_2169 carbohydrate-binding family 25 protein; carbohydrate-binding protein 820922 12420429 Clo1313_0714 Clostridium thermocellum DSM 1313 carbohydrate-binding protein YP_005687243.1 820431 D 637887 CDS YP_005687244.1 385778079 12420430 821354..822988 1 NC_017304.1 KEGG: gym:GYMC10_3892 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; AraC family two component transcriptional regulator 822988 12420430 Clo1313_0715 Clostridium thermocellum DSM 1313 AraC family two component transcriptional regulator YP_005687244.1 821354 D 637887 CDS YP_005687245.1 385778080 12420431 823179..824285 1 NC_017304.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gym:GYMC10_2893 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 824285 12420431 Clo1313_0716 Clostridium thermocellum DSM 1313 PpiC-type peptidyl-prolyl cis-trans isomerase YP_005687245.1 823179 D 637887 CDS YP_005687246.1 385778081 12420432 824524..825804 1 NC_017304.1 KEGG: cce:Ccel_3401 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 825804 12420432 Clo1313_0717 Clostridium thermocellum DSM 1313 glucose-1-phosphate adenylyltransferase YP_005687246.1 824524 D 637887 CDS YP_005687247.1 385778082 12420433 825801..826922 1 NC_017304.1 KEGG: cce:Ccel_3400 glucose-1-phosphate adenylyltransferase, GlgD subunit; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase, GlgD subunit 826922 12420433 Clo1313_0718 Clostridium thermocellum DSM 1313 glucose-1-phosphate adenylyltransferase, GlgD subunit YP_005687247.1 825801 D 637887 CDS YP_005687248.1 385778083 12420434 826954..827832 1 NC_017304.1 KEGG: cce:Ccel_3476 putative lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit 827832 12420434 Clo1313_0719 Clostridium thermocellum DSM 1313 diacylglycerol kinase catalytic subunit YP_005687248.1 826954 D 637887 CDS YP_005687249.1 385778084 12420435 complement(827963..828721) 1 NC_017304.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbe:BBR47_40230 enoyl-[acyl-carrier-protein] reductase [NADH]; short-chain dehydrogenase/reductase SDR 828721 12420435 Clo1313_0720 Clostridium thermocellum DSM 1313 short-chain dehydrogenase/reductase SDR YP_005687249.1 827963 R 637887 CDS YP_005687250.1 385778085 12420436 829059..829796 1 NC_017304.1 manually curated; PFAM: ABC transporter related; KEGG: amt:Amet_0366 ABC transporter related; SMART: AAA ATPase; ABC transporter 829796 12420436 Clo1313_0721 Clostridium thermocellum DSM 1313 ABC transporter YP_005687250.1 829059 D 637887 CDS YP_005687251.1 385778086 12420437 829783..832230 1 NC_017304.1 KEGG: amt:Amet_0367 S-layer-like domain-containing protein; hypothetical protein 832230 12420437 Clo1313_0722 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687251.1 829783 D 637887 CDS YP_005687252.1 385778087 12420438 832217..833632 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: swo:Swol_0943 ABC transporter component-like protein; hypothetical protein 833632 12420438 Clo1313_0723 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687252.1 832217 D 637887 CDS YP_005687253.1 385778088 12420440 834024..835022 1 NC_017304.1 PFAM: sodium/calcium exchanger membrane region; KEGG: cce:Ccel_2086 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 835022 12420440 Clo1313_0724 Clostridium thermocellum DSM 1313 sodium/calcium exchanger membrane region YP_005687253.1 834024 D 637887 CDS YP_005687254.1 385778089 12420441 complement(835101..835490) 1 NC_017304.1 KEGG: cce:Ccel_2085 hypothetical protein; hypothetical protein 835490 12420441 Clo1313_0725 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687254.1 835101 R 637887 CDS YP_005687255.1 385778090 12420442 complement(835492..836175) 1 NC_017304.1 PFAM: protein of unknown function DUF421; KEGG: tjr:TherJR_0421 protein of unknown function DUF421; hypothetical protein 836175 12420442 Clo1313_0726 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687255.1 835492 R 637887 CDS YP_005687256.1 385778091 12420443 complement(836381..836590) 1 NC_017304.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cce:Ccel_0484 small acid-soluble spore protein alpha/beta type; alpha/beta type small acid-soluble spore protein 836590 12420443 Clo1313_0727 Clostridium thermocellum DSM 1313 alpha/beta type small acid-soluble spore protein YP_005687256.1 836381 R 637887 CDS YP_005687257.1 385778092 12420444 complement(836681..837946) 1 NC_017304.1 KEGG: clj:CLJU_c15830 putative monogalactosyldiacylglycerol synthase; manually curated; PFAM: Monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 837946 12420444 Clo1313_0728 Clostridium thermocellum DSM 1313 monogalactosyldiacylglycerol synthase YP_005687257.1 836681 R 637887 CDS YP_005687258.1 385778093 12420445 complement(838253..839842) 1 NC_017304.1 PFAM: protein of unknown function DUF342; KEGG: cce:Ccel_0028 protein of unknown function DUF342; hypothetical protein 839842 12420445 Clo1313_0729 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687258.1 838253 R 637887 CDS YP_005687259.1 385778094 12420446 840087..841277 1 NC_017304.1 KEGG: cce:Ccel_0487 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase 841277 12420446 Clo1313_0730 Clostridium thermocellum DSM 1313 serine-type D-Ala-D-Ala carboxypeptidase YP_005687259.1 840087 D 637887 CDS YP_005687260.1 385778095 12420447 841434..842345 1 NC_017304.1 KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase; hypothetical protein 842345 12420447 Clo1313_0731 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687260.1 841434 D 637887 CDS YP_005687261.1 385778096 12420448 842636..844033 1 NC_017304.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cbi:CLJ_B1431 potassium transporter peripheral membrane component; TrkA-N domain-containing protein 844033 12420448 Clo1313_0732 Clostridium thermocellum DSM 1313 TrkA-N domain-containing protein YP_005687261.1 842636 D 637887 CDS YP_005687262.1 385778097 12420449 844080..845531 1 NC_017304.1 PFAM: cation transporter; KEGG: cbf:CLI_1412 trk system potassium uptake protein TrkH; cation transporter 845531 12420449 Clo1313_0733 Clostridium thermocellum DSM 1313 cation transporter YP_005687262.1 844080 D 637887 CDS YP_005687263.1 385778098 12420450 845658..846692 1 NC_017304.1 KEGG: mfe:Mefer_0980 7-cyano-7-deazaguanine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities 846692 12420450 Clo1313_0734 Clostridium thermocellum DSM 1313 tRNA-guanine transglycosylase, various specificities YP_005687263.1 845658 D 637887 CDS YP_005687264.1 385778099 12420451 846764..848515 1 NC_017304.1 KEGG: cce:Ccel_0488 radical SAM domain protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 848515 12420451 Clo1313_0735 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687264.1 846764 D 637887 CDS YP_005687265.1 385778100 12420452 complement(848537..848959) 1 NC_017304.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cce:Ccel_2285 anti-sigma F factor; anti-sigma regulatory factor 848959 12420452 Clo1313_0736 Clostridium thermocellum DSM 1313 anti-sigma regulatory factor YP_005687265.1 848537 R 637887 CDS YP_005687266.1 385778101 12420453 849275..850762 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; peptidase domain protein; KEGG: cbo:CBO0379 cell surface protein; copper amine oxidase-like domain-containing protein 850762 12420453 Clo1313_0737 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687266.1 849275 D 637887 CDS YP_005687267.1 385778102 12420454 850912..851613 1 NC_017304.1 KEGG: edi:EDI_171550 valyl-tRNA synthetase; hypothetical protein 851613 12420454 Clo1313_0738 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687267.1 850912 D 637887 CDS YP_005687268.1 385778103 12420455 851647..853773 1 NC_017304.1 TIGRFAM: helicase, RecD/TraA family; KEGG: tjr:TherJR_0537 helicase, RecD/TraA family; SMART: AAA ATPase; Helix-hairpin-helix DNA-binding class 1; recombinase D 853773 12420455 Clo1313_0739 Clostridium thermocellum DSM 1313 recombinase D YP_005687268.1 851647 D 637887 CDS YP_005687269.1 385778104 12420456 853970..855190 1 NC_017304.1 KEGG: cac:CA_C0037 MinD family ATPase; hypothetical protein 855190 12420456 Clo1313_0740 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687269.1 853970 D 637887 CDS YP_005687270.1 385778105 12420457 complement(855334..855963) 1 NC_017304.1 KEGG: bce:BC4459 type I restriction-modification system methylation subunit; hypothetical protein 855963 12420457 Clo1313_0741 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687270.1 855334 R 637887 CDS YP_005687271.1 385778106 12420458 856187..856897 1 NC_017304.1 KEGG: amt:Amet_0549 phospholipase C zinc-binding protein; PFAM: phospholipase C zinc-binding protein; SMART: phospholipase C zinc-binding protein; phospholipase C zinc-binding protein 856897 12420458 Clo1313_0742 Clostridium thermocellum DSM 1313 phospholipase C zinc-binding protein YP_005687271.1 856187 D 637887 CDS YP_005687272.1 385778107 12420459 complement(857170..857820) 1 NC_017304.1 PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: aoe:Clos_1365 sporulation lipoprotein YhcN/YlaJ; sporulation lipoprotein YhcN/YlaJ-like protein 857820 12420459 Clo1313_0743 Clostridium thermocellum DSM 1313 sporulation lipoprotein YhcN/YlaJ-like protein YP_005687272.1 857170 R 637887 CDS YP_005687273.1 385778108 12420460 858028..858453 1 NC_017304.1 KEGG: cce:Ccel_0693 hypothetical protein; hypothetical protein 858453 12420460 Clo1313_0744 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687273.1 858028 D 637887 CDS YP_005687274.1 385778109 12420461 complement(858536..859897) 1 NC_017304.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: cce:Ccel_1193 hypothetical protein; hypothetical protein 859897 12420461 Clo1313_0745 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687274.1 858536 R 637887 CDS YP_005687275.1 385778110 12420462 860150..860704 1 NC_017304.1 PFAM: PRC-barrel domain protein; KEGG: cce:Ccel_1194 PRC-barrel domain protein; PRC-barrel domain-containing protein 860704 12420462 Clo1313_0746 Clostridium thermocellum DSM 1313 PRC-barrel domain-containing protein YP_005687275.1 860150 D 637887 CDS YP_005687276.1 385778111 12420463 860709..860894 1 NC_017304.1 KEGG: cce:Ccel_1195 hypothetical protein; hypothetical protein 860894 12420463 Clo1313_0747 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687276.1 860709 D 637887 CDS YP_005687277.1 385778112 12420464 861082..862131 1 NC_017304.1 PFAM: protein of unknown function UPF0118; KEGG: cce:Ccel_1196 protein of unknown function UPF0118; hypothetical protein 862131 12420464 Clo1313_0748 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687277.1 861082 D 637887 CDS YP_005687278.1 385778113 12420465 862402..865044 1 NC_017304.1 TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD; KEGG: cce:Ccel_2096 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase SAD; alanyl-tRNA synthetase 865044 12420465 Clo1313_0749 Clostridium thermocellum DSM 1313 alanyl-tRNA synthetase YP_005687278.1 862402 D 637887 CDS YP_005687279.1 385778114 12420466 865903..866652 1 NC_017304.1 PFAM: CRISPR-associated protein TM1802; KEGG: mae:Maeo_1073 CRISPR-associated Csh1 family protein; CRISPR-associated protein TM1802-like protein 866652 12420466 Clo1313_0750 Clostridium thermocellum DSM 1313 CRISPR-associated protein TM1802-like protein YP_005687279.1 865903 D 637887 CDS YP_005687280.1 385778115 12420467 866735..867445 1 NC_017304.1 KEGG: mif:Metin_1193 hypothetical protein; hypothetical protein 867445 12420467 Clo1313_0751 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687280.1 866735 D 637887 CDS YP_005687281.1 385778116 12420468 867468..867719 1 NC_017304.1 KEGG: chl:Chy400_2444 hypothetical protein; hypothetical protein 867719 12420468 Clo1313_0752 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687281.1 867468 D 637887 CDS YP_005687282.1 385778117 12420469 867735..868721 1 NC_017304.1 KEGG: chl:Chy400_2444 hypothetical protein; hypothetical protein 868721 12420469 Clo1313_0753 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687282.1 867735 D 637887 CDS YP_005687283.1 385778118 12420470 868711..869700 1 NC_017304.1 KEGG: pyo:PY01185 235 kDa rhoptry protein; hypothetical protein 869700 12420470 Clo1313_0754 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687283.1 868711 D 637887 CDS YP_005687284.1 385778119 12420471 869720..871225 1 NC_017304.1 KEGG: cbb:CLD_2403 hypothetical protein; hypothetical protein 871225 12420471 Clo1313_0755 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687284.1 869720 D 637887 CDS YP_005687285.1 385778120 12420472 871226..871891 1 NC_017304.1 PFAM: protein of unknown function DUF324; KEGG: chl:Chy400_2446 hypothetical protein; hypothetical protein 871891 12420472 Clo1313_0756 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687285.1 871226 D 637887 CDS YP_005687286.1 385778121 12420473 871884..873485 1 NC_017304.1 KEGG: cbb:CLD_2404 CRISPR-associated RAMP protein; hypothetical protein 873485 12420473 Clo1313_0757 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687286.1 871884 D 637887 CDS YP_005687287.1 385778122 12420474 873485..874867 1 NC_017304.1 PFAM: protein of unknown function DUF324; KEGG: cbb:CLD_2405 CRISPR-associated RAMP protein; hypothetical protein 874867 12420474 Clo1313_0758 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687287.1 873485 D 637887 CDS YP_005687288.1 385778123 12420475 874864..875331 1 NC_017304.1 KEGG: cbb:CLD_2406 hypothetical protein; hypothetical protein 875331 12420475 Clo1313_0759 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687288.1 874864 D 637887 CDS YP_005687289.1 385778124 12420476 875336..877414 1 NC_017304.1 PFAM: protein of unknown function DUF324; KEGG: cbb:CLD_2407 hypothetical protein; hypothetical protein 877414 12420476 Clo1313_0760 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687289.1 875336 D 637887 CDS YP_005687290.1 385778125 12420477 877414..877593 1 NC_017304.1 KEGG: tva:TVAG_167180 hypothetical protein; hypothetical protein 877593 12420477 Clo1313_0761 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687290.1 877414 D 637887 CDS YP_005687291.1 385778126 12420478 877637..879103 1 NC_017304.1 TIGRFAM: CRISPR-associated protein, TIGR02710 family; KEGG: tit:Thit_0694 CRISPR-associated protein, TIGR02710 family; CRISPR-associated protein 879103 12420478 Clo1313_0762 Clostridium thermocellum DSM 1313 CRISPR-associated protein YP_005687291.1 877637 D 637887 CDS YP_005687292.1 385778127 12420480 880663..880953 1 NC_017304.1 KEGG: mmq:MmarC5_0773 CRISPR-associated Cas2 family protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2; CRISPR-associated protein Cas2 880953 12420480 Clo1313_0764 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas2 YP_005687292.1 880663 D 637887 CDS YP_005687293.1 385778128 12420481 880928..881557 1 NC_017304.1 TIGRFAM: CRISPR-associated protein Cas4; KEGG: mmq:MmarC5_0774 CRISPR-associated exonuclease Cas4 family protein; CRISPR-associated protein Cas4 881557 12420481 Clo1313_0765 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas4 YP_005687293.1 880928 D 637887 CDS YP_005687294.1 385778129 12420482 881640..882863 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 882863 12420482 Clo1313_0766 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687294.1 881640 D 637887 CDS YP_005687295.1 385778130 12420483 complement(883054..883302) 1 NC_017304.1 KEGG: bth:BT_3319 signal peptidase I; hypothetical protein 883302 12420483 Clo1313_0767 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687295.1 883054 R 637887 CDS YP_005687296.1 385778131 12420485 884379..885026 1 NC_017304.1 KEGG: cac:CA_C3039 hypothetical protein; hypothetical protein 885026 12420485 Clo1313_0769 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687296.1 884379 D 637887 CDS YP_005687297.1 385778132 12420486 885163..885960 1 NC_017304.1 manually curated; KEGG: cce:Ccel_2196 hypothetical protein; hypothetical protein 885960 12420486 Clo1313_0770 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687297.1 885163 D 637887 CDS YP_005687298.1 385778133 12420487 886002..886499 1 NC_017304.1 manually curated; KEGG: pbe:PB000356.00.0 hypothetical protein; hypothetical protein 886499 12420487 Clo1313_0771 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687298.1 886002 D 637887 CDS YP_005687299.1 385778134 12420488 887009..887869 1 NC_017304.1 KEGG: ava:Ava_1556 ribosome assembly protein 4 (RSA4); hypothetical protein 887869 12420488 Clo1313_0772 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687299.1 887009 D 637887 CDS YP_005687300.1 385778135 12420489 complement(888113..889264) 1 NC_017304.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: cce:Ccel_2178 transposase IS3/IS911 family protein; integrase catalytic subunit 889264 12420489 Clo1313_0773 Clostridium thermocellum DSM 1313 integrase catalytic subunit YP_005687300.1 888113 R 637887 CDS YP_005687301.1 385778136 12420493 890033..890545 1 NC_017304.1 KEGG: bcx:BCA_2215 nitrate reductase molybdenum cofactor assembly chaperone; hypothetical protein 890545 12420493 Clo1313_0777 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687301.1 890033 D 637887 CDS YP_005687302.1 385778137 12420494 890792..891580 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 891580 12420494 Clo1313_0778 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687302.1 890792 D 637887 CDS YP_005687303.1 385778138 12420495 891759..892562 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 892562 12420495 Clo1313_0779 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687303.1 891759 D 637887 CDS YP_005687304.1 385778139 12420496 892636..893436 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 893436 12420496 Clo1313_0780 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687304.1 892636 D 637887 CDS YP_005687305.1 385778140 12420497 893453..896383 1 NC_017304.1 KEGG: cqu:CpipJ_CPIJ011711 hypothetical protein; hypothetical protein 896383 12420497 Clo1313_0781 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687305.1 893453 D 637887 CDS YP_005687306.1 385778141 12420498 896654..897133 1 NC_017304.1 KEGG: srt:Srot_0731 hypothetical protein; hypothetical protein 897133 12420498 Clo1313_0782 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687306.1 896654 D 637887 CDS YP_005687307.1 385778142 12420499 897305..903109 1 NC_017304.1 manually curated; TIGRFAM: YD repeat protein; KEGG: cbe:Cbei_4376 YD repeat-containing protein; PFAM: YD repeat-containing protein; YD repeat protein 903109 12420499 Clo1313_0783 Clostridium thermocellum DSM 1313 YD repeat protein YP_005687307.1 897305 D 637887 CDS YP_005687308.1 385778143 12420500 903106..904035 1 NC_017304.1 PFAM: Ankyrin; KEGG: tde:TDE2014 ankyrin repeateat-containing protein; ankyrin 904035 12420500 Clo1313_0784 Clostridium thermocellum DSM 1313 ankyrin YP_005687308.1 903106 D 637887 CDS YP_005687309.1 385778144 12420501 904207..905427 1 NC_017304.1 PFAM: transposase mutator type; KEGG: bts:Btus_2829 transposase mutator type; transposase mutator type 905427 12420501 Clo1313_0785 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687309.1 904207 D 637887 CDS YP_005687310.1 385778145 12420502 905784..911081 1 NC_017304.1 KEGG: cbe:Cbei_4376 YD repeat-containing protein; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; YD repeat protein 911081 12420502 Clo1313_0786 Clostridium thermocellum DSM 1313 YD repeat protein YP_005687310.1 905784 D 637887 CDS YP_005687311.1 385778146 12420503 911048..911302 1 NC_017304.1 KEGG: bcb:BCB4264_A0981 hypothetical protein; hypothetical protein 911302 12420503 Clo1313_0787 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687311.1 911048 D 637887 CDS YP_005687312.1 385778147 12420504 911381..911614 1 NC_017304.1 KEGG: zro:ZYRO0G15246g hypothetical protein; hypothetical protein 911614 12420504 Clo1313_0788 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687312.1 911381 D 637887 CDS YP_005687313.1 385778148 12420505 911627..911875 1 NC_017304.1 KEGG: mmu:12262 complement component 1, q subcomponent, C chain; hypothetical protein 911875 12420505 Clo1313_0789 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687313.1 911627 D 637887 CDS YP_005687314.1 385778149 12420506 complement(912061..913284) 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 913284 12420506 Clo1313_0790 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687314.1 912061 R 637887 CDS YP_005687315.1 385778150 12420507 complement(913350..914921) 1 NC_017304.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: amt:Amet_4663 FAD dependent oxidoreductase; FAD dependent oxidoreductase 914921 12420507 Clo1313_0791 Clostridium thermocellum DSM 1313 FAD dependent oxidoreductase YP_005687315.1 913350 R 637887 CDS YP_005687316.1 385778151 12420508 915336..916859 1 NC_017304.1 KEGG: cpi:Cpin_2966 hypothetical protein; hypothetical protein 916859 12420508 Clo1313_0792 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687316.1 915336 D 637887 CDS YP_005687317.1 385778152 12420509 917059..917868 1 NC_017304.1 KEGG: acl:ACL_1323 ABC-type transport system, substrate-binding component; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 917868 12420509 Clo1313_0793 Clostridium thermocellum DSM 1313 family 3 extracellular solute-binding protein YP_005687317.1 917059 D 637887 CDS YP_005687318.1 385778153 12420510 917952..918614 1 NC_017304.1 KEGG: ere:EUBREC_2004 putative ABC-type polar amino acid transport system, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 918614 12420510 Clo1313_0794 Clostridium thermocellum DSM 1313 polar amino acid ABC transporter inner membrane subunit YP_005687318.1 917952 D 637887 CDS YP_005687319.1 385778154 12420511 918629..919414 1 NC_017304.1 KEGG: ere:EUBREC_2003 putative amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 919414 12420511 Clo1313_0795 Clostridium thermocellum DSM 1313 ABC transporter YP_005687319.1 918629 D 637887 CDS YP_005687320.1 385778155 12420512 919593..920267 1 NC_017304.1 KEGG: apv:Apar_0764 hypothetical protein; hypothetical protein 920267 12420512 Clo1313_0796 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687320.1 919593 D 637887 CDS YP_005687321.1 385778156 12420513 920451..920822 1 NC_017304.1 manually curated; KEGG: ctc:CTC02440 hypothetical protein; hypothetical protein 920822 12420513 Clo1313_0797 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687321.1 920451 D 637887 CDS YP_005687322.1 385778157 12420515 complement(921310..922965) 1 NC_017304.1 KEGG: ate:Athe_0718 KWG repeat protein; hypothetical protein 922965 12420515 Clo1313_0799 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687322.1 921310 R 637887 CDS YP_005687323.1 385778158 12420516 923450..923923 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ate:Athe_0840 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 923923 12420516 Clo1313_0800 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005687323.1 923450 D 637887 CDS YP_005687324.1 385778159 12420517 924127..924912 1 NC_017304.1 KEGG: cbh:CLC_0731 hypothetical protein; hypothetical protein 924912 12420517 Clo1313_0801 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687324.1 924127 D 637887 CDS YP_005687325.1 385778160 12420518 925215..925673 1 NC_017304.1 KEGG: spb:M28_Spy1085 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 925673 12420518 Clo1313_0802 Clostridium thermocellum DSM 1313 regulatory protein MarR YP_005687325.1 925215 D 637887 CDS YP_005687326.1 385778161 12420519 925670..927082 1 NC_017304.1 KEGG: eel:EUBELI_20606 multidrug resistance protein, MATE family; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 927082 12420519 Clo1313_0803 Clostridium thermocellum DSM 1313 MATE efflux family protein YP_005687326.1 925670 D 637887 CDS YP_005687327.1 385778162 12420520 927427..927963 1 NC_017304.1 KEGG: cbi:CLJ_B2329 transcriptional regulator, MerR family; hypothetical protein 927963 12420520 Clo1313_0804 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687327.1 927427 D 637887 CDS YP_005687328.1 385778163 12420521 complement(928308..930845) 1 NC_017304.1 KEGG: pjd:Pjdr2_1276 copper amine oxidase domain protein; manually curated; PFAM: TIR protein; peptidase S1 and S6 chymotrypsin/Hap; TIR protein 930845 12420521 Clo1313_0805 Clostridium thermocellum DSM 1313 TIR protein YP_005687328.1 928308 R 637887 CDS YP_005687329.1 385778164 12420523 931479..931724 1 NC_017304.1 KEGG: cac:CA_C2470 hypothetical protein; hypothetical protein 931724 12420523 Clo1313_0807 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687329.1 931479 D 637887 CDS YP_005687330.1 385778165 12420525 932793..933716 1 NC_017304.1 KEGG: cbo:CBO0408 hypothetical protein; hypothetical protein 933716 12420525 Clo1313_0809 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687330.1 932793 D 637887 CDS YP_005687331.1 385778166 12420527 936233..936736 1 NC_017304.1 KEGG: pjd:Pjdr2_2791 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 936736 12420527 Clo1313_0811 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005687331.1 936233 D 637887 CDS YP_005687332.1 385778167 12420528 936738..937640 1 NC_017304.1 KEGG: dsy:DSY4230 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF3298; hypothetical protein 937640 12420528 Clo1313_0812 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687332.1 936738 D 637887 CDS YP_005687333.1 385778168 12420529 938423..939004 1 NC_017304.1 KEGG: seu:SEQ_2102 phosphoglycerate mutase family protein; manually curated; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 939004 12420529 Clo1313_0813 Clostridium thermocellum DSM 1313 phosphoglycerate mutase YP_005687333.1 938423 D 637887 CDS YP_005687334.1 385778169 12420530 939174..939764 1 NC_017304.1 KEGG: aoe:Clos_0175 hypothetical protein; hypothetical protein 939764 12420530 Clo1313_0814 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687334.1 939174 D 637887 CDS YP_005687335.1 385778170 12420531 939919..940692 1 NC_017304.1 KEGG: dhd:Dhaf_2101 short-chain dehydrogenase/reductase SDR; manually curated; PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 940692 12420531 Clo1313_0815 Clostridium thermocellum DSM 1313 short-chain dehydrogenase/reductase SDR YP_005687335.1 939919 D 637887 CDS YP_005687336.1 385778171 12420532 940882..941358 1 NC_017304.1 KEGG: dhd:Dhaf_3832 transposase IS200-family protein; manually curated; PFAM: transposase IS200-family protein; transposase IS200-family protein 941358 12420532 Clo1313_0816 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005687336.1 940882 D 637887 CDS YP_005687337.1 385778172 12420533 complement(941734..943689) 1 NC_017304.1 manually curated; KEGG: cpy:Cphy_2889 hypothetical protein; hypothetical protein 943689 12420533 Clo1313_0817 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687337.1 941734 R 637887 CDS YP_005687338.1 385778173 12420534 943867..944880 1 NC_017304.1 KEGG: cbe:Cbei_5052 hypothetical protein; hypothetical protein 944880 12420534 Clo1313_0818 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687338.1 943867 D 637887 CDS YP_005687339.1 385778174 12420535 944924..945823 1 NC_017304.1 KEGG: ctc:CTC01798 hypothetical protein; hypothetical protein 945823 12420535 Clo1313_0819 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687339.1 944924 D 637887 CDS YP_005687340.1 385778175 12420536 945854..947182 1 NC_017304.1 KEGG: hor:Hore_04820 beta-glucosidase; PFAM: glycoside hydrolase family 1; beta-glucosidase 947182 12420536 Clo1313_0820 Clostridium thermocellum DSM 1313 beta-glucosidase YP_005687340.1 945854 D 637887 CDS YP_005687341.1 385778176 12420537 complement(947163..947465) 1 NC_017304.1 PFAM: branched-chain amino acid transport; KEGG: cbt:CLH_2217 branched-chain amino acid transport; branched-chain amino acid transport 947465 12420537 Clo1313_0821 Clostridium thermocellum DSM 1313 branched-chain amino acid transport YP_005687341.1 947163 R 637887 CDS YP_005687342.1 385778177 12420538 complement(947470..948204) 1 NC_017304.1 PFAM: AzlC family protein; KEGG: cbt:CLH_2216 AzlC family protein; AzlC family protein 948204 12420538 Clo1313_0822 Clostridium thermocellum DSM 1313 AzlC family protein YP_005687342.1 947470 R 637887 CDS YP_005687343.1 385778178 12420539 complement(948531..950654) 1 NC_017304.1 KEGG: tle:Tlet_2017 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; inorganic diphosphatase 950654 12420539 Clo1313_0823 Clostridium thermocellum DSM 1313 inorganic diphosphatase YP_005687343.1 948531 R 637887 CDS YP_005687344.1 385778179 12420540 complement(951013..951954) 1 NC_017304.1 KEGG: mmh:Mmah_0121 hypothetical protein; hypothetical protein 951954 12420540 Clo1313_0824 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687344.1 951013 R 637887 CDS YP_005687345.1 385778180 12420541 952286..953404 1 NC_017304.1 PFAM: protein of unknown function UPF0118; KEGG: cpf:CPF_0522 hypothetical protein; hypothetical protein 953404 12420541 Clo1313_0825 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687345.1 952286 D 637887 CDS YP_005687346.1 385778181 12420542 953401..953499 1 NC_017304.1 hypothetical protein 953499 12420542 Clo1313_0826 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687346.1 953401 D 637887 CDS YP_005687347.1 385778182 12420543 953622..954098 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 954098 12420543 Clo1313_0827 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005687347.1 953622 D 637887 CDS YP_005687348.1 385778183 12420544 complement(954227..955000) 1 NC_017304.1 KEGG: bha:BH0806 hypothetical protein; manually curated; PFAM: RDD domain containing protein; protein of unknown function DUF718; RDD domain-containing protein 955000 12420544 Clo1313_0828 Clostridium thermocellum DSM 1313 RDD domain-containing protein YP_005687348.1 954227 R 637887 CDS YP_005687349.1 385778184 12420545 complement(954978..955958) 1 NC_017304.1 KEGG: bsu:BSU29530 signal peptide peptidase; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 955958 12420545 Clo1313_0829 Clostridium thermocellum DSM 1313 signal peptide peptidase SppA, 36K type YP_005687349.1 954978 R 637887 CDS YP_005687350.1 385778185 12420546 956238..956834 1 NC_017304.1 PFAM: protein of unknown function DUF204; KEGG: dhd:Dhaf_2300 protein of unknown function DUF204; hypothetical protein 956834 12420546 Clo1313_0830 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687350.1 956238 D 637887 CDS YP_005687351.1 385778186 12420547 956945..957367 1 NC_017304.1 KEGG: dsi:Dsim_GD25232 GD25232 gene product from transcript GD25232-RA; hypothetical protein 957367 12420547 Clo1313_0831 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687351.1 956945 D 637887 CDS YP_005687352.1 385778187 12420548 957629..959734 1 NC_017304.1 KEGG: zpr:ZPR_4614 prolyl endopeptidase; hypothetical protein 959734 12420548 Clo1313_0832 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687352.1 957629 D 637887 CDS YP_005687353.1 385778188 12420549 959736..960596 1 NC_017304.1 KEGG: cbi:CLJ_B3630 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 960596 12420549 Clo1313_0833 Clostridium thermocellum DSM 1313 ABC transporter YP_005687353.1 959736 D 637887 CDS YP_005687354.1 385778189 12420550 960614..961867 1 NC_017304.1 KEGG: cbi:CLJ_B3629 putative lipoprotein; hypothetical protein 961867 12420550 Clo1313_0834 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687354.1 960614 D 637887 CDS YP_005687355.1 385778190 12420551 961869..963785 1 NC_017304.1 manually curated; KEGG: cbi:CLJ_B3629 putative lipoprotein; hypothetical protein 963785 12420551 Clo1313_0835 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687355.1 961869 D 637887 CDS YP_005687356.1 385778191 12420552 964167..965351 1 NC_017304.1 KEGG: cce:Ccel_3218 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 965351 12420552 Clo1313_0836 Clostridium thermocellum DSM 1313 tryptophan synthase subunit beta YP_005687356.1 964167 D 637887 CDS YP_005687357.1 385778192 12420553 965344..966114 1 NC_017304.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: cpy:Cphy_3842 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 966114 12420553 Clo1313_0837 Clostridium thermocellum DSM 1313 tryptophan synthase subunit alpha YP_005687357.1 965344 D 637887 CDS YP_005687358.1 385778193 12420554 966240..967190 1 NC_017304.1 KEGG: aoe:Clos_0643 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 967190 12420554 Clo1313_0838 Clostridium thermocellum DSM 1313 cation diffusion facilitator family transporter YP_005687358.1 966240 D 637887 CDS YP_005687359.1 385778194 12420555 complement(967232..968458) 1 NC_017304.1 KEGG: cdl:CDR20291_0870 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 968458 12420555 Clo1313_0839 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005687359.1 967232 R 637887 CDS YP_005687360.1 385778195 12420556 complement(968442..968702) 1 NC_017304.1 KEGG: gga:428690 G protein-coupled receptor 119; G protein-coupled receptor 119 968702 12420556 Clo1313_0840 Clostridium thermocellum DSM 1313 G protein-coupled receptor 119 YP_005687360.1 968442 R 637887 CDS YP_005687361.1 385778196 12420557 complement(968707..969405) 1 NC_017304.1 KEGG: cdl:CDR20291_0869 two-component system response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 969405 12420557 Clo1313_0841 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005687361.1 968707 R 637887 CDS YP_005687362.1 385778197 12420558 969581..970267 1 NC_017304.1 PFAM: VTC domain; KEGG: cpf:CPF_1141 hypothetical protein; VTC domain-containing protein 970267 12420558 Clo1313_0842 Clostridium thermocellum DSM 1313 VTC domain-containing protein YP_005687362.1 969581 D 637887 CDS YP_005687363.1 385778198 12420559 970297..970983 1 NC_017304.1 KEGG: swo:Swol_2179 hypothetical protein; hypothetical protein 970983 12420559 Clo1313_0843 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687363.1 970297 D 637887 CDS YP_005687364.1 385778199 12420560 971022..973133 1 NC_017304.1 PFAM: Spore coat protein CotH; KEGG: cpf:CPF_1143 hypothetical protein; spore coat protein CotH 973133 12420560 Clo1313_0844 Clostridium thermocellum DSM 1313 spore coat protein CotH YP_005687364.1 971022 D 637887 CDS YP_005687365.1 385778200 12420561 complement(973165..975315) 1 NC_017304.1 PFAM: Ferrous iron transport protein B domain-containing protein; Ferrous iron transport B domain-containing protein; nucleoside recognition domain protein; KEGG: cbt:CLH_1794 ferrous iron transport protein B; Ferrous iron transport protein B domain-containing protein 975315 12420561 Clo1313_0845 Clostridium thermocellum DSM 1313 Ferrous iron transport protein B domain-containing protein YP_005687365.1 973165 R 637887 CDS YP_005687366.1 385778201 12420562 complement(975398..975637) 1 NC_017304.1 PFAM: FeoA family protein; KEGG: cbt:CLH_1793 hypothetical protein; FeoA family protein 975637 12420562 Clo1313_0846 Clostridium thermocellum DSM 1313 FeoA family protein YP_005687366.1 975398 R 637887 CDS YP_005687367.1 385778202 12420563 975797..976276 1 NC_017304.1 KEGG: cce:Ccel_0797 iron dependent repressor; PFAM: iron dependent repressor; SMART: iron dependent repressor; regulatory protein MarR; DtxR family iron (metal) dependent repressor 976276 12420563 Clo1313_0847 Clostridium thermocellum DSM 1313 DtxR family iron (metal) dependent repressor YP_005687367.1 975797 D 637887 CDS YP_005687368.1 385778203 12420564 complement(976309..976659) 1 NC_017304.1 manually curated; KEGG: aoe:Clos_2092 hypothetical protein; hypothetical protein 976659 12420564 Clo1313_0848 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687368.1 976309 R 637887 CDS YP_005687369.1 385778204 12420565 982666..983913 1 NC_017304.1 PFAM: glycosyl hydrolase 53 domain protein; Dockerin type 1; KEGG: cce:Ccel_2123 glycosyl hydrolase 53 domain protein; glycosyl hydrolase domain-containing protein 983913 12420565 Clo1313_0849 Clostridium thermocellum DSM 1313 glycosyl hydrolase domain-containing protein YP_005687369.1 982666 D 637887 CDS YP_005687370.1 385778205 12420566 984025..984471 1 NC_017304.1 KEGG: cce:Ccel_0233 C_GCAxxG_C_C family protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 984471 12420566 Clo1313_0850 Clostridium thermocellum DSM 1313 C_GCAxxG_C_C family protein YP_005687370.1 984025 D 637887 CDS YP_005687371.1 385778206 12420567 984820..987348 1 NC_017304.1 PFAM: Dockerin type 1; Kelch repeat type 1-containing protein; KEGG: cac:CA_C0919 sialidase; Dockerin type 1 987348 12420567 Clo1313_0851 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005687371.1 984820 D 637887 CDS YP_005687372.1 385778207 12420568 987583..988401 1 NC_017304.1 PFAM: glycosyl transferase family 8; KEGG: ckr:CKR_0909 hypothetical protein; glycosyl transferase family protein 988401 12420568 Clo1313_0852 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005687372.1 987583 D 637887 CDS YP_005687373.1 385778208 12420569 988441..989985 1 NC_017304.1 KEGG: cac:CA_C3316 cardiolipin synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 989985 12420569 Clo1313_0853 Clostridium thermocellum DSM 1313 phospholipase D/Transphosphatidylase YP_005687373.1 988441 D 637887 CDS YP_005687374.1 385778209 12420571 990316..991035 1 NC_017304.1 manually curated; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: cce:Ccel_2106 two component transcriptional regulator, winged helix family; SMART: response regulator receiver; winged helix family two component transcriptional regulator 991035 12420571 Clo1313_0855 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005687374.1 990316 D 637887 CDS YP_005687375.1 385778210 12420572 991038..992807 1 NC_017304.1 KEGG: cce:Ccel_2107 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; multi-sensor signal transduction histidine kinase 992807 12420572 Clo1313_0856 Clostridium thermocellum DSM 1313 multi-sensor signal transduction histidine kinase YP_005687375.1 991038 D 637887 CDS YP_005687376.1 385778211 12420573 993624..995159 1 NC_017304.1 KEGG: deg:DehalGT_0710 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 995159 12420573 Clo1313_0857 Clostridium thermocellum DSM 1313 2-isopropylmalate synthase YP_005687376.1 993624 D 637887 CDS YP_005687377.1 385778212 12420574 complement(995297..996229) 1 NC_017304.1 PFAM: alpha/beta hydrolase fold; KEGG: chy:CHY_0890 alpha/beta fold family hydrolase; alpha/beta fold family hydrolase 996229 12420574 Clo1313_0858 Clostridium thermocellum DSM 1313 alpha/beta fold family hydrolase YP_005687377.1 995297 R 637887 CDS YP_005687378.1 385778213 12420575 complement(996254..997582) 1 NC_017304.1 KEGG: cce:Ccel_2295 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 997582 12420575 Clo1313_0859 Clostridium thermocellum DSM 1313 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_005687378.1 996254 R 637887 CDS YP_005687379.1 385778214 12420576 998480..998773 1 NC_017304.1 KEGG: tpd:Teth39_1696 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; TrpR-like protein YerC/YecD 998773 12420576 Clo1313_0860 Clostridium thermocellum DSM 1313 TrpR-like protein YerC/YecD YP_005687379.1 998480 D 637887 CDS YP_005687380.1 385778215 12420577 998865..999260 1 NC_017304.1 manually curated; KEGG: ftn:FTN_0537 proton-dependent oligopeptide transporter (POT) family protein, di-or tripeptide:H+ symporter; hypothetical protein 999260 12420577 Clo1313_0861 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687380.1 998865 D 637887 CDS YP_005687381.1 385778216 12420578 999342..999941 1 NC_017304.1 KEGG: tte:TTE0519 hypothetical protein; hypothetical protein 999941 12420578 Clo1313_0862 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687381.1 999342 D 637887 CDS YP_005687382.1 385778217 12420579 999961..1002693 1 NC_017304.1 KEGG: cce:Ccel_1457 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; preprotein translocase subunit SecA 1002693 12420579 Clo1313_0863 Clostridium thermocellum DSM 1313 preprotein translocase subunit SecA YP_005687382.1 999961 D 637887 CDS YP_005687383.1 385778218 12420580 1002789..1004075 1 NC_017304.1 TIGRFAM: FolC bifunctional protein; KEGG: cce:Ccel_1447 FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1004075 12420580 Clo1313_0864 Clostridium thermocellum DSM 1313 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_005687383.1 1002789 D 637887 CDS YP_005687384.1 385778219 12420581 1004187..1005344 1 NC_017304.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cce:Ccel_1448 tetratricopeptide TPR_2; hypothetical protein 1005344 12420581 Clo1313_0865 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687384.1 1004187 D 637887 CDS YP_005687385.1 385778220 12420582 1005433..1006590 1 NC_017304.1 PFAM: Patatin; KEGG: cce:Ccel_1449 patatin; patatin 1006590 12420582 Clo1313_0866 Clostridium thermocellum DSM 1313 patatin YP_005687385.1 1005433 D 637887 CDS YP_005687386.1 385778221 12420583 1006842..1008341 1 NC_017304.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; manually curated; KEGG: cce:Ccel_1450 threonine synthase; TIGRFAM: threonine synthase; threonine synthase 1008341 12420583 Clo1313_0867 Clostridium thermocellum DSM 1313 threonine synthase YP_005687386.1 1006842 D 637887 CDS YP_005687387.1 385778222 12420584 1008585..1008959 1 NC_017304.1 KEGG: csc:Csac_1059 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1008959 12420584 Clo1313_0868 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005687387.1 1008585 D 637887 CDS YP_005687388.1 385778223 12420585 complement(1009030..1010118) 1 NC_017304.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: hor:Hore_11260 oxidoreductase domain protein; oxidoreductase domain-containing protein 1010118 12420585 Clo1313_0869 Clostridium thermocellum DSM 1313 oxidoreductase domain-containing protein YP_005687388.1 1009030 R 637887 CDS YP_005687389.1 385778224 12420586 1010349..1011941 1 NC_017304.1 KEGG: drt:Dret_0887 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: metal-dependent phosphohydrolase HD region; response regulator receiver; response regulator receiver modulated metal dependent phosphohydrolase 1011941 12420586 Clo1313_0870 Clostridium thermocellum DSM 1313 response regulator receiver modulated metal dependent phosphohydrolase YP_005687389.1 1010349 D 637887 CDS YP_005687390.1 385778225 12420587 1012118..1012561 1 NC_017304.1 PFAM: amino acid-binding ACT domain protein; KEGG: cce:Ccel_1451 hypothetical protein; amino acid-binding ACT protein 1012561 12420587 Clo1313_0871 Clostridium thermocellum DSM 1313 amino acid-binding ACT protein YP_005687390.1 1012118 D 637887 CDS YP_005687391.1 385778226 12420588 1012572..1013819 1 NC_017304.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: cce:Ccel_1452 homoserine dehydrogenase; homoserine dehydrogenase 1013819 12420588 Clo1313_0872 Clostridium thermocellum DSM 1313 homoserine dehydrogenase YP_005687391.1 1012572 D 637887 CDS YP_005687392.1 385778227 12420589 1013950..1015299 1 NC_017304.1 KEGG: bha:BH1500 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 1015299 12420589 Clo1313_0873 Clostridium thermocellum DSM 1313 aspartate kinase YP_005687392.1 1013950 D 637887 CDS YP_005687393.1 385778228 12420590 1015584..1016372 1 NC_017304.1 KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; manually curated; PFAM: copper amine oxidase-like domain-containing protein; copper amine oxidase-like domain-containing protein 1016372 12420590 Clo1313_0874 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687393.1 1015584 D 637887 CDS YP_005687394.1 385778229 12420591 1016515..1022268 1 NC_017304.1 KEGG: cbe:Cbei_4376 YD repeat-containing protein; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; YD repeat protein 1022268 12420591 Clo1313_0875 Clostridium thermocellum DSM 1313 YD repeat protein YP_005687394.1 1016515 D 637887 CDS YP_005687395.1 385778230 12420592 1022301..1022759 1 NC_017304.1 KEGG: sea:SeAg_B3342 hypothetical protein; hypothetical protein 1022759 12420592 Clo1313_0876 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687395.1 1022301 D 637887 CDS YP_005687396.1 385778231 12420593 1023465..1024103 1 NC_017304.1 KEGG: tad:TRIADDRAFT_57864 hypothetical protein; hypothetical protein 1024103 12420593 Clo1313_0877 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687396.1 1023465 D 637887 CDS YP_005687397.1 385778232 12420594 1024123..1024299 1 NC_017304.1 hypothetical protein 1024299 12420594 Clo1313_0878 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687397.1 1024123 D 637887 CDS YP_005687398.1 385778233 12420595 1024296..1024574 1 NC_017304.1 KEGG: clj:CLJU_c34640 putative deacetylase; hypothetical protein 1024574 12420595 Clo1313_0879 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687398.1 1024296 D 637887 CDS YP_005687399.1 385778234 12420596 1025177..1031056 1 NC_017304.1 KEGG: cbe:Cbei_4376 YD repeat-containing protein; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; YD repeat protein 1031056 12420596 Clo1313_0880 Clostridium thermocellum DSM 1313 YD repeat protein YP_005687399.1 1025177 D 637887 CDS YP_005687400.1 385778235 12420597 1031094..1031555 1 NC_017304.1 KEGG: bcg:BCG9842_B0158 hypothetical protein; hypothetical protein 1031555 12420597 Clo1313_0881 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687400.1 1031094 D 637887 CDS YP_005687401.1 385778236 12420598 1031542..1031733 1 NC_017304.1 hypothetical protein 1031733 12420598 Clo1313_0882 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687401.1 1031542 D 637887 CDS YP_005687402.1 385778237 12420599 1031806..1032150 1 NC_017304.1 PFAM: histidine triad (HIT) protein; KEGG: tjr:TherJR_2445 histidine triad (HIT) protein; histidine triad (HIT) protein 1032150 12420599 Clo1313_0883 Clostridium thermocellum DSM 1313 histidine triad (HIT) protein YP_005687402.1 1031806 D 637887 CDS YP_005687403.1 385778238 12420600 1032340..1034472 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: adg:Adeg_0120 S-layer domain protein; S-layer protein 1034472 12420600 Clo1313_0884 Clostridium thermocellum DSM 1313 S-layer protein YP_005687403.1 1032340 D 637887 CDS YP_005687404.1 385778239 12420601 1034668..1035144 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 1035144 12420601 Clo1313_0885 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005687404.1 1034668 D 637887 CDS YP_005687405.1 385778240 12420602 1035379..1036155 1 NC_017304.1 KEGG: tpd:Teth39_1553 protein-tyrosine-phosphatase; PFAM: PHP domain protein; protein-tyrosine-phosphatase 1036155 12420602 Clo1313_0886 Clostridium thermocellum DSM 1313 protein-tyrosine-phosphatase YP_005687405.1 1035379 D 637887 CDS YP_005687406.1 385778241 12420603 1036283..1036834 1 NC_017304.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: dth:DICTH_0149 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1036834 12420603 Clo1313_0887 Clostridium thermocellum DSM 1313 dTDP-4-dehydrorhamnose 3,5-epimerase YP_005687406.1 1036283 D 637887 CDS YP_005687407.1 385778242 12420604 1036867..1037433 1 NC_017304.1 KEGG: bhy:BHWA1_01395 hypothetical protein; hypothetical protein 1037433 12420604 Clo1313_0888 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687407.1 1036867 D 637887 CDS YP_005687408.1 385778243 12420605 1037601..1038779 1 NC_017304.1 KEGG: cpr:CPR_0488 hypothetical protein; hypothetical protein 1038779 12420605 Clo1313_0889 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687408.1 1037601 D 637887 CDS YP_005687409.1 385778244 12420606 1038918..1040312 1 NC_017304.1 TIGRFAM: capsular exopolysaccharide family; KEGG: rxy:Rxyl_0560 protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 1040312 12420606 Clo1313_0890 Clostridium thermocellum DSM 1313 capsular exopolysaccharide family protein YP_005687409.1 1038918 D 637887 CDS YP_005687410.1 385778245 12420607 1040577..1041134 1 NC_017304.1 KEGG: cce:Ccel_0204 NusG antitermination factor; PFAM: NGN domain-containing protein; SMART: NGN domain-containing protein; NusG antitermination factor 1041134 12420607 Clo1313_0891 Clostridium thermocellum DSM 1313 NusG antitermination factor YP_005687410.1 1040577 D 637887 CDS YP_005687411.1 385778246 12420608 1041314..1042357 1 NC_017304.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bth:BT_0380 nucleotide sugar epimerase; NAD-dependent epimerase/dehydratase 1042357 12420608 Clo1313_0892 Clostridium thermocellum DSM 1313 NAD-dependent epimerase/dehydratase YP_005687411.1 1041314 D 637887 CDS YP_005687412.1 385778247 12420609 1042552..1043043 1 NC_017304.1 PFAM: Oligosaccharide biosynthesis protein Alg14 like; KEGG: cpy:Cphy_1202 oligosaccharide biosynthesis protein Alg14-like protein; oligosaccharide biosynthesis protein Alg14-like protein 1043043 12420609 Clo1313_0893 Clostridium thermocellum DSM 1313 oligosaccharide biosynthesis protein Alg14-like protein YP_005687412.1 1042552 D 637887 CDS YP_005687413.1 385778248 12420610 1043040..1043534 1 NC_017304.1 PFAM: Glycosyltransferase 28 domain; KEGG: blt:Balat_1401 glycosyltransferase 28-like protein; Glycosyltransferase 28 domain 1043534 12420610 Clo1313_0894 Clostridium thermocellum DSM 1313 Glycosyltransferase 28 domain YP_005687413.1 1043040 D 637887 CDS YP_005687414.1 385778249 12420611 1043544..1044434 1 NC_017304.1 KEGG: cpy:Cphy_1205 glycosyltransferase; glycosyltransferase 1044434 12420611 Clo1313_0895 Clostridium thermocellum DSM 1313 glycosyltransferase YP_005687414.1 1043544 D 637887 CDS YP_005687415.1 385778250 12420612 1044431..1045576 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: cpy:Cphy_1204 glycosyl transferase group 1; group 1 glycosyl transferase 1045576 12420612 Clo1313_0896 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005687415.1 1044431 D 637887 CDS YP_005687416.1 385778251 12420613 1045563..1046468 1 NC_017304.1 manually curated; KEGG: cpy:Cphy_1205 glycosyltransferase; glycosyltransferase 1046468 12420613 Clo1313_0897 Clostridium thermocellum DSM 1313 glycosyltransferase YP_005687416.1 1045563 D 637887 CDS YP_005687417.1 385778252 12420614 1046486..1047418 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: oih:OB2889 glycosyltransferase; family 2 glycosyl transferase 1047418 12420614 Clo1313_0898 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005687417.1 1046486 D 637887 CDS YP_005687418.1 385778253 12420615 1047400..1048671 1 NC_017304.1 PFAM: O-antigen polymerase; KEGG: bca:BCE_5389 O-antigen polymerase (wzy); O-antigen polymerase 1048671 12420615 Clo1313_0899 Clostridium thermocellum DSM 1313 O-antigen polymerase YP_005687418.1 1047400 D 637887 CDS YP_005687419.1 385778254 12420616 1048853..1050313 1 NC_017304.1 PFAM: polysaccharide biosynthesis protein; KEGG: pdi:BDI_0440 CPS repeat-containing transporter; polysaccharide biosynthesis protein 1050313 12420616 Clo1313_0900 Clostridium thermocellum DSM 1313 polysaccharide biosynthesis protein YP_005687419.1 1048853 D 637887 CDS YP_005687420.1 385778255 12420617 1050595..1051920 1 NC_017304.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: hor:Hore_22770 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation; nucleotide sugar dehydrogenase 1051920 12420617 Clo1313_0901 Clostridium thermocellum DSM 1313 nucleotide sugar dehydrogenase YP_005687420.1 1050595 D 637887 CDS YP_005687421.1 385778256 12420618 1051965..1052444 1 NC_017304.1 PFAM: VanZ family protein; KEGG: bha:BH3707 acetobutylicum phosphotransbutyrylase; VanZ family protein 1052444 12420618 Clo1313_0902 Clostridium thermocellum DSM 1313 VanZ family protein YP_005687421.1 1051965 D 637887 CDS YP_005687422.1 385778257 12420619 1052483..1052887 1 NC_017304.1 manually curated; TIGRFAM: single-strand binding protein; KEGG: cce:Ccel_0056 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 1052887 12420619 Clo1313_0903 Clostridium thermocellum DSM 1313 single-strand binding protein YP_005687422.1 1052483 D 637887 CDS YP_005687423.1 385778258 12420620 complement(1052900..1054303) 1 NC_017304.1 PFAM: sugar transferase; manually curated; KEGG: gur:Gura_3177 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1054303 12420620 Clo1313_0904 Clostridium thermocellum DSM 1313 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_005687423.1 1052900 R 637887 CDS YP_005687424.1 385778259 12420621 1054803..1054979 1 NC_017304.1 KEGG: cce:Ccel_2094 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 1054979 12420621 Clo1313_0905 Clostridium thermocellum DSM 1313 30S ribosomal protein S21 YP_005687424.1 1054803 D 637887 CDS YP_005687425.1 385778260 12420622 1054996..1055439 1 NC_017304.1 KEGG: cce:Ccel_2093 GatB/YqeY domain protein; GatB/YqeY domain-containing protein 1055439 12420622 Clo1313_0906 Clostridium thermocellum DSM 1313 GatB/YqeY domain-containing protein YP_005687425.1 1054996 D 637887 CDS YP_005687426.1 385778261 12420623 1055605..1058088 1 NC_017304.1 KEGG: amt:Amet_2351 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ 1058088 12420623 Clo1313_0907 Clostridium thermocellum DSM 1313 single-stranded-DNA-specific exonuclease RecJ YP_005687426.1 1055605 D 637887 CDS YP_005687427.1 385778262 12420624 1058156..1058671 1 NC_017304.1 KEGG: cce:Ccel_1952 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase 1058671 12420624 Clo1313_0908 Clostridium thermocellum DSM 1313 adenine phosphoribosyltransferase YP_005687427.1 1058156 D 637887 CDS YP_005687428.1 385778263 12420625 1058762..1060936 1 NC_017304.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: cce:Ccel_1951 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; metal-dependent phosphohydrolase HD sub domain; (p)ppGpp synthetase I SpoT/RelA 1060936 12420625 Clo1313_0909 Clostridium thermocellum DSM 1313 (p)ppGpp synthetase I SpoT/RelA YP_005687428.1 1058762 D 637887 CDS YP_005687429.1 385778264 12420626 1061053..1061502 1 NC_017304.1 KEGG: cce:Ccel_1950 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 1061502 12420626 Clo1313_0910 Clostridium thermocellum DSM 1313 D-tyrosyl-tRNA(Tyr) deacylase YP_005687429.1 1061053 D 637887 CDS YP_005687430.1 385778265 12420627 1061516..1062121 1 NC_017304.1 KEGG: slp:Slip_0770 beta-lactamase-like protein; beta-lactamase-like protein 1062121 12420627 Clo1313_0911 Clostridium thermocellum DSM 1313 beta-lactamase-like protein YP_005687430.1 1061516 D 637887 CDS YP_005687431.1 385778266 12420628 1062118..1063635 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: cce:Ccel_1948 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen dehydrogenase 1063635 12420628 Clo1313_0912 Clostridium thermocellum DSM 1313 coproporphyrinogen dehydrogenase YP_005687431.1 1062118 D 637887 CDS YP_005687432.1 385778267 12420629 1064207..1065334 1 NC_017304.1 KEGG: tjr:TherJR_2441 hypothetical protein; hypothetical protein 1065334 12420629 Clo1313_0913 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687432.1 1064207 D 637887 CDS YP_005687433.1 385778268 12420630 1065334..1066572 1 NC_017304.1 PFAM: type II secretion system protein E; KEGG: tjr:TherJR_2440 type II secretion system protein E; type II secretion system protein E 1066572 12420630 Clo1313_0914 Clostridium thermocellum DSM 1313 type II secretion system protein E YP_005687433.1 1065334 D 637887 CDS YP_005687434.1 385778269 12420631 1066598..1067404 1 NC_017304.1 PFAM: Type II secretion system F domain; KEGG: cce:Ccel_0504 Flp pilus assembly protein TadB-like protein; Type II secretion system F domain 1067404 12420631 Clo1313_0915 Clostridium thermocellum DSM 1313 Type II secretion system F domain YP_005687434.1 1066598 D 637887 CDS YP_005687435.1 385778270 12420632 1067416..1068285 1 NC_017304.1 PFAM: Type II secretion system F domain; KEGG: tjr:TherJR_2438 type II secretion system F domain protein; Type II secretion system F domain 1068285 12420632 Clo1313_0916 Clostridium thermocellum DSM 1313 Type II secretion system F domain YP_005687435.1 1067416 D 637887 CDS YP_005687436.1 385778271 12420633 1068372..1068578 1 NC_017304.1 KEGG: ere:EUBREC_0045 hypothetical protein; hypothetical protein 1068578 12420633 Clo1313_0917 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687436.1 1068372 D 637887 CDS YP_005687437.1 385778272 12420634 1068775..1069476 1 NC_017304.1 KEGG: cce:Ccel_0507 hypothetical protein; hypothetical protein 1069476 12420634 Clo1313_0918 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687437.1 1068775 D 637887 CDS YP_005687438.1 385778273 12420635 1069528..1070157 1 NC_017304.1 PFAM: peptidase A24A prepilin type IV; KEGG: hor:Hore_06010 prepilin peptidase; peptidase A24A prepilin type IV 1070157 12420635 Clo1313_0919 Clostridium thermocellum DSM 1313 peptidase A24A prepilin type IV YP_005687438.1 1069528 D 637887 CDS YP_005687439.1 385778274 12420636 complement(1070194..1071756) 1 NC_017304.1 KEGG: tjr:TherJR_2432 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; forkhead-associated protein 1071756 12420636 Clo1313_0920 Clostridium thermocellum DSM 1313 forkhead-associated protein YP_005687439.1 1070194 R 637887 CDS YP_005687440.1 385778275 12420637 1072201..1073331 1 NC_017304.1 KEGG: cno:NT01CX_1677 DNA polymerase I; hypothetical protein 1073331 12420637 Clo1313_0921 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687440.1 1072201 D 637887 CDS YP_005687441.1 385778276 12420638 1073799..1075052 1 NC_017304.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: tmt:Tmath_1086 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1075052 12420638 Clo1313_0922 Clostridium thermocellum DSM 1313 histidyl-tRNA synthetase YP_005687441.1 1073799 D 637887 CDS YP_005687442.1 385778277 12420639 1075103..1076890 1 NC_017304.1 KEGG: cce:Ccel_1946 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 1076890 12420639 Clo1313_0923 Clostridium thermocellum DSM 1313 aspartyl-tRNA synthetase YP_005687442.1 1075103 D 637887 CDS YP_005687443.1 385778278 12420640 1077166..1077726 1 NC_017304.1 manually curated; TIGRFAM: signal peptidase I; KEGG: apr:Apre_1183 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 1077726 12420640 Clo1313_0924 Clostridium thermocellum DSM 1313 signal peptidase I YP_005687443.1 1077166 D 637887 CDS YP_005687444.1 385778279 12420641 1078042..1082343 1 NC_017304.1 KEGG: clj:CLJU_c35330 putative activator of (R)-2-hydroxyglutaryl-coA dehydratase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; 2-hydroxyglutaryl-CoA dehydratase D-component; ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 1082343 12420641 Clo1313_0925 Clostridium thermocellum DSM 1313 CoA-substrate-specific enzyme activase YP_005687444.1 1078042 D 637887 CDS YP_005687445.1 385778280 12420642 complement(1082514..1082723) 1 NC_017304.1 KEGG: cin:100180475 similar to LOC414497 protein; hypothetical protein 1082723 12420642 Clo1313_0926 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687445.1 1082514 R 637887 CDS YP_005687446.1 385778281 12420643 1083136..1084413 1 NC_017304.1 KEGG: cce:Ccel_1944 stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; stage II sporulation protein P 1084413 12420643 Clo1313_0927 Clostridium thermocellum DSM 1313 stage II sporulation protein P YP_005687446.1 1083136 D 637887 CDS YP_005687447.1 385778282 12420644 1084531..1084812 1 NC_017304.1 KEGG: pfh:PFHG_04547 conserved hypothetical protein; hypothetical protein 1084812 12420644 Clo1313_0928 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687447.1 1084531 D 637887 CDS YP_005687448.1 385778283 12420645 1084988..1086799 1 NC_017304.1 KEGG: cce:Ccel_1941 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein LepA 1086799 12420645 Clo1313_0929 Clostridium thermocellum DSM 1313 GTP-binding protein LepA YP_005687448.1 1084988 D 637887 CDS YP_005687449.1 385778284 12420646 1086864..1088006 1 NC_017304.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; KEGG: cce:Ccel_1980 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; oxygen-independent coproporphyrinogen III oxidase 1088006 12420646 Clo1313_0930 Clostridium thermocellum DSM 1313 oxygen-independent coproporphyrinogen III oxidase YP_005687449.1 1086864 D 637887 CDS YP_005687450.1 385778285 12420647 1088149..1089204 1 NC_017304.1 manually curated; TIGRFAM: heat-inducible transcription repressor HrcA; KEGG: cce:Ccel_1800 heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like; heat-inducible transcription repressor HrcA 1089204 12420647 Clo1313_0931 Clostridium thermocellum DSM 1313 heat-inducible transcription repressor HrcA YP_005687450.1 1088149 D 637887 CDS YP_005687451.1 385778286 12420648 1089315..1089995 1 NC_017304.1 PFAM: GrpE protein; KEGG: cce:Ccel_1799 GrpE protein; GrpE protein HSP-70 cofactor 1089995 12420648 Clo1313_0932 Clostridium thermocellum DSM 1313 GrpE protein HSP-70 cofactor YP_005687451.1 1089315 D 637887 CDS YP_005687452.1 385778287 12420649 1090092..1091918 1 NC_017304.1 TIGRFAM: chaperone protein DnaK; KEGG: cce:Ccel_1798 molecular chaperone DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 1091918 12420649 Clo1313_0933 Clostridium thermocellum DSM 1313 chaperone protein DnaK YP_005687452.1 1090092 D 637887 CDS YP_005687453.1 385778288 12420650 1092127..1093287 1 NC_017304.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: cce:Ccel_1797 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 1093287 12420650 Clo1313_0934 Clostridium thermocellum DSM 1313 chaperone protein DnaJ YP_005687453.1 1092127 D 637887 CDS YP_005687454.1 385778289 12420651 1093305..1094246 1 NC_017304.1 KEGG: cce:Ccel_1796 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase 1094246 12420651 Clo1313_0935 Clostridium thermocellum DSM 1313 50S ribosomal protein L11 methyltransferase YP_005687454.1 1093305 D 637887 CDS YP_005687455.1 385778290 12420652 1094228..1094971 1 NC_017304.1 KEGG: cce:Ccel_1795 protein of unknown function DUF558; manually curated; PFAM: protein of unknown function DUF558; hypothetical protein 1094971 12420652 Clo1313_0936 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687455.1 1094228 D 637887 CDS YP_005687456.1 385778291 12420653 1094968..1095339 1 NC_017304.1 KEGG: cce:Ccel_1794 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1095339 12420653 Clo1313_0937 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005687456.1 1094968 D 637887 CDS YP_005687457.1 385778292 12420654 1095417..1095620 1 NC_017304.1 hypothetical protein 1095620 12420654 Clo1313_0938 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687457.1 1095417 D 637887 CDS YP_005687458.1 385778293 12420655 1095690..1096574 1 NC_017304.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: cce:Ccel_1793 hypothetical protein; YicC-like domain-containing protein 1096574 12420655 Clo1313_0939 Clostridium thermocellum DSM 1313 YicC-like domain-containing protein YP_005687458.1 1095690 D 637887 CDS YP_005687459.1 385778294 12420656 1096593..1096874 1 NC_017304.1 PFAM: protein of unknown function DUF370; KEGG: cce:Ccel_1792 hypothetical protein; hypothetical protein 1096874 12420656 Clo1313_0940 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687459.1 1096593 D 637887 CDS YP_005687460.1 385778295 12420657 1096887..1097498 1 NC_017304.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: cce:Ccel_1791 guanylate kinase; PFAM: guanylate kinase; guanylate kinase 1097498 12420657 Clo1313_0941 Clostridium thermocellum DSM 1313 guanylate kinase YP_005687460.1 1096887 D 637887 CDS YP_005687461.1 385778296 12420658 1097558..1097794 1 NC_017304.1 KEGG: cce:Ccel_1790 DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 1097794 12420658 Clo1313_0942 Clostridium thermocellum DSM 1313 DNA-directed RNA polymerase subunit omega YP_005687461.1 1097558 D 637887 CDS YP_005687462.1 385778297 12420659 1097888..1099189 1 NC_017304.1 PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; manually curated; KEGG: aoe:Clos_1425 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1099189 12420659 Clo1313_0943 Clostridium thermocellum DSM 1313 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_005687462.1 1097888 D 637887 CDS YP_005687463.1 385778298 12420660 1099331..1100719 1 NC_017304.1 KEGG: cce:Ccel_1789 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; glycyl-tRNA synthetase 1100719 12420660 Clo1313_0944 Clostridium thermocellum DSM 1313 glycyl-tRNA synthetase YP_005687463.1 1099331 D 637887 CDS YP_005687464.1 385778299 12420661 1100889..1102220 1 NC_017304.1 PFAM: ATP-binding region ATPase domain protein; KEGG: cce:Ccel_2125 signal transduction histidine kinase regulating citrate/malate metabolism; signal transduction histidine kinase regulating citrate/malate metabolism 1102220 12420661 Clo1313_0945 Clostridium thermocellum DSM 1313 signal transduction histidine kinase regulating citrate/malate metabolism YP_005687464.1 1100889 D 637887 CDS YP_005687465.1 385778300 12420662 complement(1102317..1102481) 1 NC_017304.1 KEGG: cce:Ccel_2126 hypothetical protein; hypothetical protein 1102481 12420662 Clo1313_0946 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687465.1 1102317 R 637887 CDS YP_005687466.1 385778301 12420663 complement(1102526..1103125) 1 NC_017304.1 KEGG: cce:Ccel_2127 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; Accessory gene regulator B 1103125 12420663 Clo1313_0947 Clostridium thermocellum DSM 1313 Accessory gene regulator B YP_005687466.1 1102526 R 637887 CDS YP_005687467.1 385778302 12420664 complement(1103152..1104225) 1 NC_017304.1 KEGG: shi:Shel_18370 predicted Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1104225 12420664 Clo1313_0948 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687467.1 1103152 R 637887 CDS YP_005687468.1 385778303 12420665 1104737..1107388 1 NC_017304.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: csc:Csac_1955 pyruvate phosphate dikinase; PFAM: PEP-utilizing protein; pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; pyruvate, phosphate dikinase 1107388 12420665 Clo1313_0949 Clostridium thermocellum DSM 1313 pyruvate, phosphate dikinase YP_005687468.1 1104737 D 637887 CDS YP_005687469.1 385778304 12420666 1108020..1109915 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; S-layer domain-containing protein; KEGG: hmo:HM1_0137 multidomain protein with S-layer homology region, glug motif, ig motif, I-set domain, pkd domain; cellulosome anchoring protein cohesin subunit 1109915 12420666 Clo1313_0950 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005687469.1 1108020 D 637887 CDS YP_005687470.1 385778305 12420668 complement(1110308..1110709) 1 NC_017304.1 KEGG: bfu:BC1G_12391 hypothetical protein; hypothetical protein 1110709 12420668 Clo1313_0951 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687470.1 1110308 R 637887 CDS YP_005687471.1 385778306 12420669 1110935..1111282 1 NC_017304.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: tle:Tlet_1738 cupin 2 domain-containing protein; cupin 1111282 12420669 Clo1313_0952 Clostridium thermocellum DSM 1313 cupin YP_005687471.1 1110935 D 637887 CDS YP_005687472.1 385778307 12420670 1111711..1113084 1 NC_017304.1 KEGG: cbl:CLK_3694 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; PhoH family protein 1113084 12420670 Clo1313_0953 Clostridium thermocellum DSM 1313 PhoH family protein YP_005687472.1 1111711 D 637887 CDS YP_005687473.1 385778308 12420671 1113269..1114495 1 NC_017304.1 PFAM: glycosyl transferase group 1; Starch synthase catalytic domain-containing protein; KEGG: cce:Ccel_1773 glycosyl transferase group 1; group 1 glycosyl transferase 1114495 12420671 Clo1313_0954 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005687473.1 1113269 D 637887 CDS YP_005687474.1 385778309 12420672 1115094..1116761 1 NC_017304.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: cce:Ccel_1772 beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase 1116761 12420672 Clo1313_0955 Clostridium thermocellum DSM 1313 RNA-metabolising metallo-beta-lactamase YP_005687474.1 1115094 D 637887 CDS YP_005687475.1 385778310 12420673 complement(1116939..1118186) 1 NC_017304.1 PFAM: protein of unknown function DUF795; KEGG: cce:Ccel_1771 protein of unknown function DUF795; hypothetical protein 1118186 12420673 Clo1313_0956 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687475.1 1116939 R 637887 CDS YP_005687476.1 385778311 12420674 complement(1118317..1119315) 1 NC_017304.1 KEGG: tex:Teth514_2182 hypothetical protein; hypothetical protein 1119315 12420674 Clo1313_0957 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687476.1 1118317 R 637887 CDS YP_005687477.1 385778312 12420675 1119635..1119949 1 NC_017304.1 KEGG: cce:Ccel_2166 hypothetical protein; hypothetical protein 1119949 12420675 Clo1313_0958 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687477.1 1119635 D 637887 CDS YP_005687478.1 385778313 12420676 1120054..1120371 1 NC_017304.1 PFAM: Ribosomal protein L25-like; KEGG: aoe:Clos_0044 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; 50S ribosomal protein L25 1120371 12420676 Clo1313_0959 Clostridium thermocellum DSM 1313 50S ribosomal protein L25 YP_005687478.1 1120054 D 637887 CDS YP_005687479.1 385778314 12420677 1120560..1121615 1 NC_017304.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: cce:Ccel_0646 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1121615 12420677 Clo1313_0960 Clostridium thermocellum DSM 1313 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_005687479.1 1120560 D 637887 CDS YP_005687480.1 385778315 12420678 1121731..1122417 1 NC_017304.1 KEGG: cce:Ccel_2165 hypothetical protein; hypothetical protein 1122417 12420678 Clo1313_0961 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687480.1 1121731 D 637887 CDS YP_005687481.1 385778316 12420679 1122508..1123083 1 NC_017304.1 KEGG: cdl:CDR20291_3292 putative 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1123083 12420679 Clo1313_0962 Clostridium thermocellum DSM 1313 5-formyltetrahydrofolate cyclo-ligase YP_005687481.1 1122508 D 637887 CDS YP_005687482.1 385778317 12420680 1123174..1123290 1 NC_017304.1 hypothetical protein 1123290 12420680 Clo1313_0963 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687482.1 1123174 D 637887 CDS YP_005687483.1 385778318 12420681 1123317..1124861 1 NC_017304.1 KEGG: dae:Dtox_0190 resolvase domain protein; manually curated; PFAM: Recombinase; Resolvase domain; recombinase 1124861 12420681 Clo1313_0964 Clostridium thermocellum DSM 1313 recombinase YP_005687483.1 1123317 D 637887 CDS YP_005687484.1 385778319 12420682 1125068..1126075 1 NC_017304.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dhd:Dhaf_3058 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1126075 12420682 Clo1313_0965 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005687484.1 1125068 D 637887 CDS YP_005687485.1 385778320 12420683 complement(1126140..1127348) 1 NC_017304.1 TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; KEGG: cce:Ccel_2140 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; homoserine kinase 1127348 12420683 Clo1313_0966 Clostridium thermocellum DSM 1313 homoserine kinase YP_005687485.1 1126140 R 637887 CDS YP_005687486.1 385778321 12420684 1127575..1128441 1 NC_017304.1 PFAM: amidohydrolase 2; KEGG: cce:Ccel_0547 amidohydrolase 2; amidohydrolase 2 1128441 12420684 Clo1313_0967 Clostridium thermocellum DSM 1313 amidohydrolase 2 YP_005687486.1 1127575 D 637887 CDS YP_005687487.1 385778322 12420685 complement(1128491..1128832) 1 NC_017304.1 KEGG: aoe:Clos_0441 sodium pump decarboxylase, gamma subunit; hypothetical protein 1128832 12420685 Clo1313_0968 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687487.1 1128491 R 637887 CDS YP_005687488.1 385778323 12420686 1129132..1129320 1 NC_017304.1 KEGG: tet:TTHERM_01043120 hypothetical protein; hypothetical protein 1129320 12420686 Clo1313_0969 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687488.1 1129132 D 637887 CDS YP_005687489.1 385778324 12420687 1129386..1130072 1 NC_017304.1 KEGG: cce:Ccel_1892 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein; winged helix family two component transcriptional regulator 1130072 12420687 Clo1313_0970 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005687489.1 1129386 D 637887 CDS YP_005687490.1 385778325 12420688 1130072..1131586 1 NC_017304.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cce:Ccel_1891 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 1131586 12420688 Clo1313_0971 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005687490.1 1130072 D 637887 CDS YP_005687491.1 385778326 12420689 1131697..1133226 1 NC_017304.1 KEGG: cce:Ccel_1890 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap 1133226 12420689 Clo1313_0972 Clostridium thermocellum DSM 1313 peptidase S1 and S6 chymotrypsin/Hap YP_005687491.1 1131697 D 637887 CDS YP_005687492.1 385778327 12420690 1133410..1134807 1 NC_017304.1 KEGG: cce:Ccel_1889 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1134807 12420690 Clo1313_0973 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005687492.1 1133410 D 637887 CDS YP_005687493.1 385778328 12420691 1134948..1136414 1 NC_017304.1 KEGG: tjr:TherJR_2362 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; glycogen/starch synthase 1136414 12420691 Clo1313_0974 Clostridium thermocellum DSM 1313 glycogen/starch synthase YP_005687493.1 1134948 D 637887 CDS YP_005687494.1 385778329 12420692 1136555..1137196 1 NC_017304.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: cce:Ccel_1887 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 1137196 12420692 Clo1313_0975 Clostridium thermocellum DSM 1313 endonuclease III YP_005687494.1 1136555 D 637887 CDS YP_005687495.1 385778330 12420693 1137240..1138919 1 NC_017304.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: cce:Ccel_1885 diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; GAF domain protein; GAF sensor-containing diguanylate cyclase 1138919 12420693 Clo1313_0976 Clostridium thermocellum DSM 1313 GAF sensor-containing diguanylate cyclase YP_005687495.1 1137240 D 637887 CDS YP_005687496.1 385778331 12420694 complement(1138978..1139673) 1 NC_017304.1 KEGG: cce:Ccel_1884 hypothetical protein; hypothetical protein 1139673 12420694 Clo1313_0977 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687496.1 1138978 R 637887 CDS YP_005687497.1 385778332 12420695 1139804..1140067 1 NC_017304.1 KEGG: csc:Csac_2347 transglycosylase-associated protein; transglycosylase-associated protein 1140067 12420695 Clo1313_0978 Clostridium thermocellum DSM 1313 transglycosylase-associated protein YP_005687497.1 1139804 D 637887 CDS YP_005687498.1 385778333 12420696 complement(1140332..1140520) 1 NC_017304.1 KEGG: cce:Ccel_1883 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 1140520 12420696 Clo1313_0979 Clostridium thermocellum DSM 1313 50S ribosomal protein L28 YP_005687498.1 1140332 R 637887 CDS YP_005687499.1 385778334 12420697 1140738..1142822 1 NC_017304.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: cce:Ccel_1882 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecG 1142822 12420697 Clo1313_0980 Clostridium thermocellum DSM 1313 ATP-dependent DNA helicase RecG YP_005687499.1 1140738 D 637887 CDS YP_005687500.1 385778335 12420698 1142894..1143469 1 NC_017304.1 KEGG: cce:Ccel_1881 methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095; methyltransferase 1143469 12420698 Clo1313_0981 Clostridium thermocellum DSM 1313 methyltransferase YP_005687500.1 1142894 D 637887 CDS YP_005687501.1 385778336 12420699 1143508..1143987 1 NC_017304.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: cce:Ccel_1880 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 1143987 12420699 Clo1313_0982 Clostridium thermocellum DSM 1313 pantetheine-phosphate adenylyltransferase YP_005687501.1 1143508 D 637887 CDS YP_005687502.1 385778337 12420700 1143990..1144454 1 NC_017304.1 KEGG: cce:Ccel_1879 H+-ATPase subunit H; H+-ATPase subunit H 1144454 12420700 Clo1313_0983 Clostridium thermocellum DSM 1313 H+-ATPase subunit H YP_005687502.1 1143990 D 637887 CDS YP_005687503.1 385778338 12420701 complement(1144477..1145784) 1 NC_017304.1 KEGG: cce:Ccel_1878 sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; sporulation integral membrane protein YlbJ 1145784 12420701 Clo1313_0984 Clostridium thermocellum DSM 1313 sporulation integral membrane protein YlbJ YP_005687503.1 1144477 R 637887 CDS YP_005687504.1 385778339 12420702 complement(1145933..1147378) 1 NC_017304.1 PFAM: alpha-L-arabinofuranosidase B; KEGG: syn:slr0518 arabinofuranosidase; alpha-L-arabinofuranosidase 1147378 12420702 Clo1313_0985 Clostridium thermocellum DSM 1313 alpha-L-arabinofuranosidase YP_005687504.1 1145933 R 637887 CDS YP_005687505.1 385778340 12420703 complement(1147476..1148213) 1 NC_017304.1 PFAM: sigma-70 region 2 domain protein; KEGG: cbe:Cbei_2829 putative RNA polymerase sigma factor SigI; FliA/WhiG subfamily RNA polymerase sigma-28 subunit 1148213 12420703 Clo1313_0986 Clostridium thermocellum DSM 1313 FliA/WhiG subfamily RNA polymerase sigma-28 subunit YP_005687505.1 1147476 R 637887 CDS YP_005687506.1 385778341 12420704 complement(1148345..1150384) 1 NC_017304.1 KEGG: cce:Ccel_1229 carbohydrate binding family 6; PFAM: Carbohydrate binding family 6; glycoside hydrolase family 43; Dockerin type 1; SMART: cellulose binding type IV; carbohydrate binding family protein 1150384 12420704 Clo1313_0987 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005687506.1 1148345 R 637887 CDS YP_005687507.1 385778342 12420705 complement(1150607..1151830) 1 NC_017304.1 KEGG: amt:Amet_2165 proteinase inhibitor I4, serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; proteinase inhibitor I4 serpin 1151830 12420705 Clo1313_0988 Clostridium thermocellum DSM 1313 proteinase inhibitor I4 serpin YP_005687507.1 1150607 R 637887 CDS YP_005687508.1 385778343 12420706 complement(1151911..1153194) 1 NC_017304.1 KEGG: scl:sce5027 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 1153194 12420706 Clo1313_0989 Clostridium thermocellum DSM 1313 iron-sulfur cluster-binding protein YP_005687508.1 1151911 R 637887 CDS YP_005687509.1 385778344 12420707 1153421..1154599 1 NC_017304.1 KEGG: cce:Ccel_1864 sensor DegS domain protein; PFAM: Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; DegS sensor signal transduction histidine kinase 1154599 12420707 Clo1313_0990 Clostridium thermocellum DSM 1313 DegS sensor signal transduction histidine kinase YP_005687509.1 1153421 D 637887 CDS YP_005687510.1 385778345 12420708 1154592..1155242 1 NC_017304.1 KEGG: cce:Ccel_1863 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 1155242 12420708 Clo1313_0991 Clostridium thermocellum DSM 1313 LuxR family two component transcriptional regulator YP_005687510.1 1154592 D 637887 CDS YP_005687511.1 385778346 12420709 1155607..1158075 1 NC_017304.1 KEGG: cce:Ccel_3226 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1158075 12420709 Clo1313_0992 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005687511.1 1155607 D 637887 CDS YP_005687512.1 385778347 12420710 1158183..1159919 1 NC_017304.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: cce:Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1159919 12420710 Clo1313_0993 Clostridium thermocellum DSM 1313 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_005687512.1 1158183 D 637887 CDS YP_005687513.1 385778348 12420711 1160243..1163788 1 NC_017304.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: cce:Ccel_1459 DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit; nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein; DNA polymerase III subunit alpha 1163788 12420711 Clo1313_0994 Clostridium thermocellum DSM 1313 DNA polymerase III subunit alpha YP_005687513.1 1160243 D 637887 CDS YP_005687514.1 385778349 12420712 1163868..1164089 1 NC_017304.1 PFAM: tryptophan RNA-binding attenuator protein; KEGG: dae:Dtox_0810 transcription attenuation protein MtrB; tryptophan RNA-binding attenuator protein 1164089 12420712 Clo1313_0995 Clostridium thermocellum DSM 1313 tryptophan RNA-binding attenuator protein YP_005687514.1 1163868 D 637887 CDS YP_005687515.1 385778350 12420713 1164111..1164308 1 NC_017304.1 KEGG: cce:Ccel_1461 hypothetical protein; hypothetical protein 1164308 12420713 Clo1313_0996 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687515.1 1164111 D 637887 CDS YP_005687516.1 385778351 12420714 1164394..1165368 1 NC_017304.1 KEGG: ate:Athe_1265 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 1165368 12420714 Clo1313_0997 Clostridium thermocellum DSM 1313 6-phosphofructokinase YP_005687516.1 1164394 D 637887 CDS YP_005687517.1 385778352 12420715 1165490..1165906 1 NC_017304.1 PFAM: thioesterase superfamily protein; KEGG: cce:Ccel_1462 thioesterase superfamily protein; thioesterase superfamily protein 1165906 12420715 Clo1313_0998 Clostridium thermocellum DSM 1313 thioesterase superfamily protein YP_005687517.1 1165490 D 637887 CDS YP_005687518.1 385778353 12420716 1165938..1166480 1 NC_017304.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cce:Ccel_1463 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1166480 12420716 Clo1313_0999 Clostridium thermocellum DSM 1313 CDP-alcohol phosphatidyltransferase YP_005687518.1 1165938 D 637887 CDS YP_005687519.1 385778354 12420717 1166887..1167666 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 1167666 12420717 Clo1313_1000 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687519.1 1166887 D 637887 CDS YP_005687520.1 385778355 12420718 1167786..1170938 1 NC_017304.1 KEGG: csc:Csac_1076 glycoside hydrolase family protein; PFAM: Carbohydrate-binding CenC domain protein; type 3a cellulose-binding domain protein; SMART: von Willebrand factor type A; carbohydrate-binding CenC domain-containing protein 1170938 12420718 Clo1313_1001 Clostridium thermocellum DSM 1313 carbohydrate-binding CenC domain-containing protein YP_005687520.1 1167786 D 637887 CDS YP_005687521.1 385778356 12420719 1171005..1173272 1 NC_017304.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ttr:Tter_0181 glycoside hydrolase family 3 domain protein; glycoside hydrolase 1173272 12420719 Clo1313_1002 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687521.1 1171005 D 637887 CDS YP_005687522.1 385778357 12420720 complement(1173606..1174061) 1 NC_017304.1 KEGG: pcb:PC000923.01.0 hypothetical protein; hypothetical protein 1174061 12420720 Clo1313_1003 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687522.1 1173606 R 637887 CDS YP_005687523.1 385778358 12420721 complement(1174307..1174600) 1 NC_017304.1 KEGG: bbe:BBR47_45940 hypothetical protein; hypothetical protein 1174600 12420721 Clo1313_1004 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687523.1 1174307 R 637887 CDS YP_005687524.1 385778359 12420722 1174912..1177494 1 NC_017304.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; KEGG: msi:Msm_0823 phosphoenolpyruvate synthase/pyruvate phosphate dikinase, PpsA; pyruvate phosphate dikinase PEP/pyruvate-binding protein 1177494 12420722 Clo1313_1005 Clostridium thermocellum DSM 1313 pyruvate phosphate dikinase PEP/pyruvate-binding protein YP_005687524.1 1174912 D 637887 CDS YP_005687525.1 385778360 12420723 1177821..1178831 1 NC_017304.1 PFAM: Auxin Efflux Carrier; KEGG: cce:Ccel_2186 auxin efflux carrier; auxin efflux carrier family protein 1178831 12420723 Clo1313_1006 Clostridium thermocellum DSM 1313 auxin efflux carrier family protein YP_005687525.1 1177821 D 637887 CDS YP_005687526.1 385778361 12420724 1179126..1180523 1 NC_017304.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: cce:Ccel_0209 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 1180523 12420724 Clo1313_1007 Clostridium thermocellum DSM 1313 xanthine/uracil/vitamin C permease YP_005687526.1 1179126 D 637887 CDS YP_005687527.1 385778362 12420725 1180661..1181182 1 NC_017304.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: cce:Ccel_2185 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1181182 12420725 Clo1313_1008 Clostridium thermocellum DSM 1313 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_005687527.1 1180661 D 637887 CDS YP_005687528.1 385778363 12420726 1181233..1182699 1 NC_017304.1 KEGG: cce:Ccel_2184 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 1182699 12420726 Clo1313_1009 Clostridium thermocellum DSM 1313 amidophosphoribosyltransferase YP_005687528.1 1181233 D 637887 CDS YP_005687529.1 385778364 12420727 1182792..1183814 1 NC_017304.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: cce:Ccel_2183 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 1183814 12420727 Clo1313_1010 Clostridium thermocellum DSM 1313 phosphoribosylformylglycinamidine cyclo-ligase YP_005687529.1 1182792 D 637887 CDS YP_005687530.1 385778365 12420728 1183808..1184437 1 NC_017304.1 KEGG: cce:Ccel_2182 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 1184437 12420728 Clo1313_1011 Clostridium thermocellum DSM 1313 phosphoribosylglycinamide formyltransferase YP_005687530.1 1183808 D 637887 CDS YP_005687531.1 385778366 12420729 1184501..1186045 1 NC_017304.1 SMART: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: cce:Ccel_2181 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1186045 12420729 Clo1313_1012 Clostridium thermocellum DSM 1313 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_005687531.1 1184501 D 637887 CDS YP_005687532.1 385778367 12420730 1186070..1187329 1 NC_017304.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: cce:Ccel_2180 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine--glycine ligase 1187329 12420730 Clo1313_1013 Clostridium thermocellum DSM 1313 phosphoribosylamine--glycine ligase YP_005687532.1 1186070 D 637887 CDS YP_005687533.1 385778368 12420731 complement(1187376..1188548) 1 NC_017304.1 PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cby:CLM_3067 glycosyl transferase, family 2; family 2 glycosyl transferase 1188548 12420731 Clo1313_1014 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005687533.1 1187376 R 637887 CDS YP_005687534.1 385778369 12420732 1189239..1189700 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mac:MA3114 acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 1189700 12420732 Clo1313_1015 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005687534.1 1189239 D 637887 CDS YP_005687535.1 385778370 12420733 1189849..1190469 1 NC_017304.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: cce:Ccel_1363 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 1190469 12420733 Clo1313_1016 Clostridium thermocellum DSM 1313 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_005687535.1 1189849 D 637887 CDS YP_005687536.1 385778371 12420734 1190614..1191183 1 NC_017304.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: csc:Csac_1816 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1191183 12420734 Clo1313_1017 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005687536.1 1190614 D 637887 CDS YP_005687537.1 385778372 12420735 1191212..1191808 1 NC_017304.1 KEGG: cce:Ccel_1365 hypothetical protein; hypothetical protein 1191808 12420735 Clo1313_1018 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687537.1 1191212 D 637887 CDS YP_005687538.1 385778373 12420736 1191970..1192311 1 NC_017304.1 KEGG: cce:Ccel_1366 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 1192311 12420736 Clo1313_1019 Clostridium thermocellum DSM 1313 iojap family protein YP_005687538.1 1191970 D 637887 CDS YP_005687539.1 385778374 12420737 1192428..1194905 1 NC_017304.1 KEGG: csc:Csac_1819 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 1194905 12420737 Clo1313_1020 Clostridium thermocellum DSM 1313 leucyl-tRNA synthetase YP_005687539.1 1192428 D 637887 CDS YP_005687540.1 385778375 12420738 1195192..1219059 1 NC_017304.1 KEGG: cbe:Cbei_1606 fibronectin, type III domain-containing protein; PFAM: PKD domain containing protein; Fibronectin type III domain protein; Cna B domain protein; Hyalin; S-layer domain-containing protein; SMART: PKD domain containing protein; Fibronectin type III domain protein; PKD domain-containing protein 1219059 12420738 Clo1313_1021 Clostridium thermocellum DSM 1313 PKD domain-containing protein YP_005687540.1 1195192 D 637887 CDS YP_005687541.1 385778376 12420739 complement(1219141..1219911) 1 NC_017304.1 KEGG: tme:Tmel_0749 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1219911 12420739 Clo1313_1022 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005687541.1 1219141 R 637887 CDS YP_005687542.1 385778377 12420740 complement(1220006..1220449) 1 NC_017304.1 KEGG: taf:THA_1814 integral membrane protein MviN; hypothetical protein 1220449 12420740 Clo1313_1023 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687542.1 1220006 R 637887 CDS YP_005687543.1 385778378 12420741 complement(1220864..1222594) 1 NC_017304.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cce:Ccel_1369 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1222594 12420741 Clo1313_1024 Clostridium thermocellum DSM 1313 AMP-dependent synthetase and ligase YP_005687543.1 1220864 R 637887 CDS YP_005687544.1 385778379 12420742 complement(1222860..1224158) 1 NC_017304.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cce:Ccel_1370 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 1224158 12420742 Clo1313_1025 Clostridium thermocellum DSM 1313 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_005687544.1 1222860 R 637887 CDS YP_005687545.1 385778380 12420743 1224437..1225327 1 NC_017304.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; KEGG: cce:Ccel_1371 competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding class 1; competence protein ComEA 1225327 12420743 Clo1313_1026 Clostridium thermocellum DSM 1313 competence protein ComEA YP_005687545.1 1224437 D 637887 CDS YP_005687546.1 385778381 12420744 1225486..1226103 1 NC_017304.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: adg:Adeg_1491 lipoprotein LpqB, GerMN domain protein; Lipoprotein LpqB, GerMN domain 1226103 12420744 Clo1313_1027 Clostridium thermocellum DSM 1313 Lipoprotein LpqB, GerMN domain YP_005687546.1 1225486 D 637887 CDS YP_005687547.1 385778382 12420745 complement(1226165..1226320) 1 NC_017304.1 hypothetical protein 1226320 12420745 Clo1313_1028 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687547.1 1226165 R 637887 CDS YP_005687548.1 385778383 12420746 1226910..1228817 1 NC_017304.1 KEGG: cce:Ccel_1372 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; threonyl-tRNA synthetase 1228817 12420746 Clo1313_1029 Clostridium thermocellum DSM 1313 threonyl-tRNA synthetase YP_005687548.1 1226910 D 637887 CDS YP_005687549.1 385778384 12420747 1229332..1230162 1 NC_017304.1 TIGRFAM: thymidylate synthase; KEGG: dae:Dtox_0188 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 1230162 12420747 Clo1313_1030 Clostridium thermocellum DSM 1313 thymidylate synthase YP_005687549.1 1229332 D 637887 CDS YP_005687550.1 385778385 12420748 1230176..1230679 1 NC_017304.1 PFAM: dihydrofolate reductase region; KEGG: cdl:CDR20291_0044 dihydrofolate reductase region; dihydrofolate reductase subunit 1230679 12420748 Clo1313_1031 Clostridium thermocellum DSM 1313 dihydrofolate reductase subunit YP_005687550.1 1230176 D 637887 CDS YP_005687551.1 385778386 12420749 1230924..1231445 1 NC_017304.1 KEGG: cce:Ccel_1311 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 1231445 12420749 Clo1313_1032 Clostridium thermocellum DSM 1313 translation initiation factor IF-3 YP_005687551.1 1230924 D 637887 CDS YP_005687552.1 385778387 12420750 1231471..1231668 1 NC_017304.1 KEGG: clo:HMPREF0868_1314 ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 1231668 12420750 Clo1313_1033 Clostridium thermocellum DSM 1313 50S ribosomal protein L35 YP_005687552.1 1231471 D 637887 CDS YP_005687553.1 385778388 12420751 1231687..1232040 1 NC_017304.1 KEGG: cce:Ccel_1313 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 1232040 12420751 Clo1313_1034 Clostridium thermocellum DSM 1313 50S ribosomal protein L20 YP_005687553.1 1231687 D 637887 CDS YP_005687554.1 385778389 12420752 1232187..1232990 1 NC_017304.1 KEGG: cce:Ccel_1437 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase 1232990 12420752 Clo1313_1035 Clostridium thermocellum DSM 1313 TrmH family RNA methyltransferase YP_005687554.1 1232187 D 637887 CDS YP_005687555.1 385778390 12420753 1233204..1241972 1 NC_017304.1 PFAM: glycosyltransferase 36; glycosyltransferase 36 associated; carbohydrate binding; KEGG: amt:Amet_3537 glycosyltransferase 36; glycosyltransferase 1241972 12420753 Clo1313_1036 Clostridium thermocellum DSM 1313 glycosyltransferase YP_005687555.1 1233204 D 637887 CDS YP_005687556.1 385778391 12420754 1242052..1242948 1 NC_017304.1 KEGG: cce:Ccel_1801 hypothetical protein; hypothetical protein 1242948 12420754 Clo1313_1037 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687556.1 1242052 D 637887 CDS YP_005687557.1 385778392 12420755 complement(1242969..1244060) 1 NC_017304.1 KEGG: cdf:CD2126 hypothetical protein; hypothetical protein 1244060 12420755 Clo1313_1038 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687557.1 1242969 R 637887 CDS YP_005687558.1 385778393 12420756 complement(1244101..1244802) 1 NC_017304.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: sfu:Sfum_0044 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 1244802 12420756 Clo1313_1039 Clostridium thermocellum DSM 1313 leucyl/phenylalanyl-tRNA/protein transferase YP_005687558.1 1244101 R 637887 CDS YP_005687559.1 385778394 12420757 complement(1244809..1247139) 1 NC_017304.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: clj:CLJU_c24730 ATP-dependent Clp protease ATP-binding subunit ClpA; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1247139 12420757 Clo1313_1040 Clostridium thermocellum DSM 1313 ATP-dependent Clp protease ATP-binding protein ClpA YP_005687559.1 1244809 R 637887 CDS YP_005687560.1 385778395 12420758 complement(1247202..1247501) 1 NC_017304.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: sat:SYN_02377 ATP-dependent Clp protease adaptor protein; ATP-dependent Clp protease adaptor protein ClpS 1247501 12420758 Clo1313_1041 Clostridium thermocellum DSM 1313 ATP-dependent Clp protease adaptor protein ClpS YP_005687560.1 1247202 R 637887 CDS YP_005687561.1 385778396 12420759 1247802..1248173 1 NC_017304.1 PFAM: protein of unknown function DUF81; KEGG: cce:Ccel_2540 permease; hypothetical protein 1248173 12420759 Clo1313_1042 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687561.1 1247802 D 637887 CDS YP_005687562.1 385778397 12420760 1248203..1248583 1 NC_017304.1 PFAM: protein of unknown function DUF81; KEGG: cce:Ccel_2539 hypothetical protein; hypothetical protein 1248583 12420760 Clo1313_1043 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687562.1 1248203 D 637887 CDS YP_005687563.1 385778398 12420761 complement(1248628..1248900) 1 NC_017304.1 KEGG: pfa:PF08_0028 hypothetical protein; hypothetical protein 1248900 12420761 Clo1313_1044 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687563.1 1248628 R 637887 CDS YP_005687564.1 385778399 12420762 1249255..1250193 1 NC_017304.1 KEGG: pcb:PC000070.05.0 hypothetical protein; hypothetical protein 1250193 12420762 Clo1313_1045 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687564.1 1249255 D 637887 CDS YP_005687565.1 385778400 12420763 1250461..1251825 1 NC_017304.1 KEGG: cce:Ccel_2450 tryptophan synthase subunit beta; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-phosphate dependent TrpB-like protein 1251825 12420763 Clo1313_1046 Clostridium thermocellum DSM 1313 pyridoxal-phosphate dependent TrpB-like protein YP_005687565.1 1250461 D 637887 CDS YP_005687566.1 385778401 12420764 complement(1251973..1252551) 1 NC_017304.1 KEGG: cce:Ccel_1375 hypothetical protein; hypothetical protein 1252551 12420764 Clo1313_1047 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687566.1 1251973 R 637887 CDS YP_005687567.1 385778402 12420765 complement(1252629..1254428) 1 NC_017304.1 KEGG: rty:RT0097 hypothetical protein; hypothetical protein 1254428 12420765 Clo1313_1048 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687567.1 1252629 R 637887 CDS YP_005687568.1 385778403 12420766 1254656..1255018 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_3988 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1255018 12420766 Clo1313_1049 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005687568.1 1254656 D 637887 CDS YP_005687569.1 385778404 12420767 1255045..1255161 1 NC_017304.1 KEGG: dhd:Dhaf_0601 hypothetical protein; hypothetical protein 1255161 12420767 Clo1313_1050 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687569.1 1255045 D 637887 CDS YP_005687570.1 385778405 12420768 complement(1255309..1256832) 1 NC_017304.1 KEGG: msi:Msm_1288 hypothetical protein; hypothetical protein 1256832 12420768 Clo1313_1051 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687570.1 1255309 R 637887 CDS YP_005687571.1 385778406 12420769 1257339..1259267 1 NC_017304.1 KEGG: cce:Ccel_0489 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; serine protein kinase PrkA 1259267 12420769 Clo1313_1052 Clostridium thermocellum DSM 1313 serine protein kinase PrkA YP_005687571.1 1257339 D 637887 CDS YP_005687572.1 385778407 12420770 1259309..1260523 1 NC_017304.1 KEGG: cce:Ccel_0490 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444; sporulation protein YhbH 1260523 12420770 Clo1313_1053 Clostridium thermocellum DSM 1313 sporulation protein YhbH YP_005687572.1 1259309 D 637887 CDS YP_005687573.1 385778408 12420771 1260546..1261934 1 NC_017304.1 PFAM: SpoVR family protein; KEGG: cce:Ccel_0491 SpoVR family protein; SpoVR family protein 1261934 12420771 Clo1313_1054 Clostridium thermocellum DSM 1313 SpoVR family protein YP_005687573.1 1260546 D 637887 CDS YP_005687574.1 385778409 12420772 1262092..1263267 1 NC_017304.1 PFAM: major facilitator superfamily MFS_1; KEGG: tte:TTE2499 major facilitator superfamily permease; major facilitator superfamily protein 1263267 12420772 Clo1313_1055 Clostridium thermocellum DSM 1313 major facilitator superfamily protein YP_005687574.1 1262092 D 637887 CDS YP_005687575.1 385778410 12420773 1263431..1264258 1 NC_017304.1 KEGG: eat:EAT1b_0450 purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; purine nucleoside phosphorylase I 1264258 12420773 Clo1313_1056 Clostridium thermocellum DSM 1313 purine nucleoside phosphorylase I YP_005687575.1 1263431 D 637887 CDS YP_005687576.1 385778411 12420774 1264262..1265506 1 NC_017304.1 TIGRFAM: adenosylhomocysteinase; KEGG: cce:Ccel_2168 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase; adenosylhomocysteinase 1265506 12420774 Clo1313_1057 Clostridium thermocellum DSM 1313 adenosylhomocysteinase YP_005687576.1 1264262 D 637887 CDS YP_005687577.1 385778412 12420775 1265598..1266893 1 NC_017304.1 PFAM: amidohydrolase; KEGG: cce:Ccel_2167 amidohydrolase; amidohydrolase 1266893 12420775 Clo1313_1058 Clostridium thermocellum DSM 1313 amidohydrolase YP_005687577.1 1265598 D 637887 CDS YP_005687578.1 385778413 12420777 1267474..1267827 1 NC_017304.1 KEGG: smm:Smp_135900 DNA double-strand break repair rad50 ATPase; hypothetical protein 1267827 12420777 Clo1313_1059 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687578.1 1267474 D 637887 CDS YP_005687579.1 385778414 12420778 1267961..1269316 1 NC_017304.1 SMART: Hedgehog/intein hint domain protein; KEGG: bcg:BCG9842_B2210 putative cytoplasmic protein; Hedgehog/intein hint domain-containing protein 1269316 12420778 Clo1313_1060 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005687579.1 1267961 D 637887 CDS YP_005687580.1 385778415 12420783 1273558..1274826 1 NC_017304.1 PFAM: Domain of unknown function DUF1910; Domain of unknown function DUF1911; KEGG: bcg:BCG9842_B2211 hypothetical protein; hypothetical protein 1274826 12420783 Clo1313_1065 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687580.1 1273558 D 637887 CDS YP_005687581.1 385778416 12420784 complement(1275129..1276352) 1 NC_017304.1 KEGG: tpd:Teth39_2032 transposase, mutator type; manually curated; PFAM: transposase mutator type; transposase mutator type 1276352 12420784 Clo1313_1066 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687581.1 1275129 R 637887 CDS YP_005687582.1 385778417 12420785 1276685..1277716 1 NC_017304.1 manually curated; KEGG: cce:Ccel_0039 S-layer domain protein; hypothetical protein 1277716 12420785 Clo1313_1067 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687582.1 1276685 D 637887 CDS YP_005687583.1 385778418 12420786 1277990..1278634 1 NC_017304.1 manually curated; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: amt:Amet_2940 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1278634 12420786 Clo1313_1068 Clostridium thermocellum DSM 1313 HAD-superfamily hydrolase YP_005687583.1 1277990 D 637887 CDS YP_005687584.1 385778419 12420787 complement(1278687..1279118) 1 NC_017304.1 manually curated; KEGG: ctc:CTC00441 hypothetical protein; hypothetical protein 1279118 12420787 Clo1313_1069 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687584.1 1278687 R 637887 CDS YP_005687585.1 385778420 12420788 complement(1279293..1280261) 1 NC_017304.1 manually curated; PFAM: ABC transporter related; KEGG: pjd:Pjdr2_2762 ABC transporter related; SMART: AAA ATPase; ABC transporter 1280261 12420788 Clo1313_1070 Clostridium thermocellum DSM 1313 ABC transporter YP_005687585.1 1279293 R 637887 CDS YP_005687586.1 385778421 12420789 complement(1280266..1281048) 1 NC_017304.1 KEGG: pjd:Pjdr2_2761 protein of unknown function DUF990; manually curated; PFAM: protein of unknown function DUF990; hypothetical protein 1281048 12420789 Clo1313_1071 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687586.1 1280266 R 637887 CDS YP_005687587.1 385778422 12420790 complement(1281045..1281899) 1 NC_017304.1 PFAM: protein of unknown function DUF990; KEGG: pjd:Pjdr2_2760 protein of unknown function DUF990; hypothetical protein 1281899 12420790 Clo1313_1072 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687587.1 1281045 R 637887 CDS YP_005687588.1 385778423 12420791 1282177..1283112 1 NC_017304.1 KEGG: bfa:Bfae_06580 esterase/lipase; esterase/lipase 1283112 12420791 Clo1313_1073 Clostridium thermocellum DSM 1313 esterase/lipase YP_005687588.1 1282177 D 637887 CDS YP_005687589.1 385778424 12420792 1283109..1284389 1 NC_017304.1 KEGG: bfa:Bfae_06590 hypothetical protein; hypothetical protein 1284389 12420792 Clo1313_1074 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687589.1 1283109 D 637887 CDS YP_005687590.1 385778425 12420793 1284404..1285072 1 NC_017304.1 KEGG: bfa:Bfae_06600 hypothetical protein; hypothetical protein 1285072 12420793 Clo1313_1075 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687590.1 1284404 D 637887 CDS YP_005687591.1 385778426 12420794 1285220..1286149 1 NC_017304.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: cce:Ccel_1709 ATPase associated with various cellular activities AAA_3; ATPase 1286149 12420794 Clo1313_1076 Clostridium thermocellum DSM 1313 ATPase YP_005687591.1 1285220 D 637887 CDS YP_005687592.1 385778427 12420795 1286193..1287461 1 NC_017304.1 PFAM: protein of unknown function DUF58; KEGG: cce:Ccel_1710 protein of unknown function DUF58; hypothetical protein 1287461 12420795 Clo1313_1077 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687592.1 1286193 D 637887 CDS YP_005687593.1 385778428 12420796 1287511..1289793 1 NC_017304.1 KEGG: cce:Ccel_1711 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; transglutaminase domain-containing protein 1289793 12420796 Clo1313_1078 Clostridium thermocellum DSM 1313 transglutaminase domain-containing protein YP_005687593.1 1287511 D 637887 CDS YP_005687594.1 385778429 12420797 1289935..1290321 1 NC_017304.1 KEGG: cac:CA_C1357 hypothetical protein; hypothetical protein 1290321 12420797 Clo1313_1079 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687594.1 1289935 D 637887 CDS YP_005687595.1 385778430 12420798 1291165..1291359 1 NC_017304.1 KEGG: hmo:HM1_1019 small, acid-soluble spore protein h 1; TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; small acid-soluble spore protein, H-type 1291359 12420798 Clo1313_1080 Clostridium thermocellum DSM 1313 small acid-soluble spore protein, H-type YP_005687595.1 1291165 D 637887 CDS YP_005687596.1 385778431 12420799 1291526..1292200 1 NC_017304.1 PFAM: isochorismatase hydrolase; KEGG: cpy:Cphy_1765 isochorismatase hydrolase; isochorismatase hydrolase 1292200 12420799 Clo1313_1081 Clostridium thermocellum DSM 1313 isochorismatase hydrolase YP_005687596.1 1291526 D 637887 CDS YP_005687597.1 385778432 12420800 1292212..1293672 1 NC_017304.1 TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: cbk:CLL_A2878 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 1293672 12420800 Clo1313_1082 Clostridium thermocellum DSM 1313 nicotinate phosphoribosyltransferase YP_005687597.1 1292212 D 637887 CDS YP_005687598.1 385778433 12420801 1294000..1294446 1 NC_017304.1 PFAM: CheC domain protein; KEGG: amt:Amet_0247 CheC domain-containing protein; chemotaxis protein CheC 1294446 12420801 Clo1313_1083 Clostridium thermocellum DSM 1313 chemotaxis protein CheC YP_005687598.1 1294000 D 637887 CDS YP_005687599.1 385778434 12420802 complement(1294930..1295739) 1 NC_017304.1 PFAM: protein of unknown function DUF155; KEGG: gur:Gura_1501 hypothetical protein; hypothetical protein 1295739 12420802 Clo1313_1084 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687599.1 1294930 R 637887 CDS YP_005687600.1 385778435 12420803 complement(1295762..1296586) 1 NC_017304.1 PFAM: protein of unknown function DUF155; KEGG: pjd:Pjdr2_0569 protein of unknown function DUF155; hypothetical protein 1296586 12420803 Clo1313_1085 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687600.1 1295762 R 637887 CDS YP_005687601.1 385778436 12420804 1296974..1297621 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: cce:Ccel_2317 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1297621 12420804 Clo1313_1086 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005687601.1 1296974 D 637887 CDS YP_005687602.1 385778437 12420805 complement(1297638..1298786) 1 NC_017304.1 KEGG: bpo:BP951000_0774 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 1298786 12420805 Clo1313_1087 Clostridium thermocellum DSM 1313 iron-sulfur cluster-binding protein YP_005687602.1 1297638 R 637887 CDS YP_005687603.1 385778438 12420806 complement(1298978..1299121) 1 NC_017304.1 KEGG: osa:4342478 hypothetical protein; hypothetical protein 1299121 12420806 Clo1313_1088 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687603.1 1298978 R 637887 CDS YP_005687604.1 385778439 12420807 1299354..1300601 1 NC_017304.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: cce:Ccel_0520 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 1300601 12420807 Clo1313_1089 Clostridium thermocellum DSM 1313 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_005687604.1 1299354 D 637887 CDS YP_005687605.1 385778440 12420808 1301200..1302075 1 NC_017304.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: cce:Ccel_0519 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 1302075 12420808 Clo1313_1090 Clostridium thermocellum DSM 1313 dihydrodipicolinate reductase YP_005687605.1 1301200 D 637887 CDS YP_005687606.1 385778441 12420809 1302279..1303430 1 NC_017304.1 KEGG: bts:Btus_1014 beta-lactamase class A-like protein; hypothetical protein 1303430 12420809 Clo1313_1091 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687606.1 1302279 D 637887 CDS YP_005687607.1 385778442 12420810 1304131..1304232 1 NC_017304.1 hypothetical protein 1304232 12420810 Clo1313_1092 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687607.1 1304131 D 637887 CDS YP_005687608.1 385778443 12420811 1304244..1305632 1 NC_017304.1 PFAM: AMMECR1 domain protein; Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: tpd:Teth39_0581 hypothetical protein; AMMECR1 domain-containing protein 1305632 12420811 Clo1313_1093 Clostridium thermocellum DSM 1313 AMMECR1 domain-containing protein YP_005687608.1 1304244 D 637887 CDS YP_005687609.1 385778444 12420812 1305644..1306513 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_1182 radical SAM domain-containing protein; radical SAM protein 1306513 12420812 Clo1313_1094 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687609.1 1305644 D 637887 CDS YP_005687610.1 385778445 12420813 1306639..1307517 1 NC_017304.1 PFAM: protein of unknown function DUF147; KEGG: cce:Ccel_1201 protein of unknown function DUF147; hypothetical protein 1307517 12420813 Clo1313_1095 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687610.1 1306639 D 637887 CDS YP_005687611.1 385778446 12420814 1307514..1308725 1 NC_017304.1 PFAM: YbbR family protein; KEGG: cce:Ccel_1202 YbbR family protein; hypothetical protein 1308725 12420814 Clo1313_1096 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687611.1 1307514 D 637887 CDS YP_005687612.1 385778447 12420815 1308742..1310328 1 NC_017304.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cce:Ccel_1203 FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1310328 12420815 Clo1313_1097 Clostridium thermocellum DSM 1313 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005687612.1 1308742 D 637887 CDS YP_005687613.1 385778448 12420816 1310538..1311887 1 NC_017304.1 KEGG: cce:Ccel_1204 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 1311887 12420816 Clo1313_1098 Clostridium thermocellum DSM 1313 phosphoglucosamine mutase YP_005687613.1 1310538 D 637887 CDS YP_005687614.1 385778449 12420817 1312349..1314172 1 NC_017304.1 KEGG: cce:Ccel_1205 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; glucosamine/fructose-6-phosphate aminotransferase 1314172 12420817 Clo1313_1099 Clostridium thermocellum DSM 1313 glucosamine/fructose-6-phosphate aminotransferase YP_005687614.1 1312349 D 637887 CDS YP_005687615.1 385778450 12420818 1314944..1315342 1 NC_017304.1 KEGG: amt:Amet_1827 regulatory protein, ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1315342 12420818 Clo1313_1100 Clostridium thermocellum DSM 1313 regulatory protein ArsR YP_005687615.1 1314944 D 637887 CDS YP_005687616.1 385778451 12420819 1315478..1316533 1 NC_017304.1 KEGG: amt:Amet_0984 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 1316533 12420819 Clo1313_1101 Clostridium thermocellum DSM 1313 arsenical-resistance protein YP_005687616.1 1315478 D 637887 CDS YP_005687617.1 385778452 12420820 1316558..1316959 1 NC_017304.1 KEGG: amt:Amet_0983 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein-tyrosine phosphatase 1316959 12420820 Clo1313_1102 Clostridium thermocellum DSM 1313 protein-tyrosine phosphatase YP_005687617.1 1316558 D 637887 CDS YP_005687618.1 385778453 12420821 1317068..1317922 1 NC_017304.1 PFAM: permease; KEGG: ckr:CKR_1589 hypothetical protein; permease 1317922 12420821 Clo1313_1103 Clostridium thermocellum DSM 1313 permease YP_005687618.1 1317068 D 637887 CDS YP_005687619.1 385778454 12420822 join(1318796..1319074,1319073..1319948) 1 NC_017304.1 KEGG: cce:Ccel_1666 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1319948 12420822 Clo1313_1104 Clostridium thermocellum DSM 1313 transposase IS3/IS911 family protein YP_005687619.1 1318796 D 637887 CDS YP_005687620.1 385778455 12420823 1320170..1320385 1 NC_017304.1 manually curated; KEGG: mga:MGA_0950 hypothetical protein; hypothetical protein 1320385 12420823 Clo1313_1105 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687620.1 1320170 D 637887 CDS YP_005687621.1 385778456 12420824 1320711..1323074 1 NC_017304.1 KEGG: tte:TTE1262 pili biogenesis protein PilB-like ATPase; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type II secretion system protein E 1323074 12420824 Clo1313_1106 Clostridium thermocellum DSM 1313 type II secretion system protein E YP_005687621.1 1320711 D 637887 CDS YP_005687622.1 385778457 12420825 1323090..1324145 1 NC_017304.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: tte:TTE1263 pili biogenesis protein PilT-like ATPase; SMART: AAA ATPase; twitching motility protein 1324145 12420825 Clo1313_1107 Clostridium thermocellum DSM 1313 twitching motility protein YP_005687622.1 1323090 D 637887 CDS YP_005687623.1 385778458 12420826 1324604..1325818 1 NC_017304.1 PFAM: Type II secretion system F domain; KEGG: tpd:Teth39_1069 type II secretion system protein; Type II secretion system F domain 1325818 12420826 Clo1313_1108 Clostridium thermocellum DSM 1313 Type II secretion system F domain YP_005687623.1 1324604 D 637887 CDS YP_005687624.1 385778459 12420827 1325973..1326479 1 NC_017304.1 KEGG: drm:Dred_1042 hypothetical protein; hypothetical protein 1326479 12420827 Clo1313_1109 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687624.1 1325973 D 637887 CDS YP_005687625.1 385778460 12420828 1326587..1327147 1 NC_017304.1 manually curated; KEGG: hor:Hore_06040 prepilin-type N-terminal cleavage/methylation domain protein; hypothetical protein 1327147 12420828 Clo1313_1110 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687625.1 1326587 D 637887 CDS YP_005687626.1 385778461 12420829 1327188..1327739 1 NC_017304.1 KEGG: tte:TTE1273 hypothetical protein; manually curated; PFAM: Fimbrial assembly family protein; fimbrial assembly family protein 1327739 12420829 Clo1313_1111 Clostridium thermocellum DSM 1313 fimbrial assembly family protein YP_005687626.1 1327188 D 637887 CDS YP_005687627.1 385778462 12420830 1327739..1329031 1 NC_017304.1 manually curated; KEGG: tva:TVAG_494990 hypothetical protein; hypothetical protein 1329031 12420830 Clo1313_1112 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687627.1 1327739 D 637887 CDS YP_005687628.1 385778463 12420831 1329077..1329598 1 NC_017304.1 KEGG: neu:NE1746 fimbrial protein pilin; hypothetical protein 1329598 12420831 Clo1313_1113 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687628.1 1329077 D 637887 CDS YP_005687629.1 385778464 12420832 1329675..1332224 1 NC_017304.1 KEGG: cno:NT01CX_1600 hypothetical protein; hypothetical protein 1332224 12420832 Clo1313_1114 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687629.1 1329675 D 637887 CDS YP_005687630.1 385778465 12420833 1332252..1333541 1 NC_017304.1 KEGG: mcd:MCRO_0480 hypothetical protein; hypothetical protein 1333541 12420833 Clo1313_1115 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687630.1 1332252 D 637887 CDS YP_005687631.1 385778466 12420834 1333692..1334465 1 NC_017304.1 PFAM: peptidase S14 ClpP; KEGG: cce:Ccel_1703 peptidase S14 ClpP; peptidase S14 ClpP 1334465 12420834 Clo1313_1116 Clostridium thermocellum DSM 1313 peptidase S14 ClpP YP_005687631.1 1333692 D 637887 CDS YP_005687632.1 385778467 12420835 1334462..1334686 1 NC_017304.1 KEGG: tpd:Teth39_1196 hypothetical protein; hypothetical protein 1334686 12420835 Clo1313_1117 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687632.1 1334462 D 637887 CDS YP_005687633.1 385778468 12420836 1334860..1337286 1 NC_017304.1 KEGG: cce:Ccel_0601 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; cell division protein FtsK 1337286 12420836 Clo1313_1118 Clostridium thermocellum DSM 1313 cell division protein FtsK YP_005687633.1 1334860 D 637887 CDS YP_005687634.1 385778469 12420837 1337378..1339297 1 NC_017304.1 KEGG: cce:Ccel_0603 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1339297 12420837 Clo1313_1119 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687634.1 1337378 D 637887 CDS YP_005687635.1 385778470 12420838 1339406..1340263 1 NC_017304.1 KEGG: cce:Ccel_0604 tetrahydrofolate dehydrogenase/cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 1340263 12420838 Clo1313_1120 Clostridium thermocellum DSM 1313 methylenetetrahydrofolate dehydrogenase YP_005687635.1 1339406 D 637887 CDS YP_005687636.1 385778471 12420839 1340358..1341035 1 NC_017304.1 KEGG: dae:Dtox_1393 hypothetical protein; hypothetical protein 1341035 12420839 Clo1313_1121 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687636.1 1340358 D 637887 CDS YP_005687637.1 385778472 12420840 1341153..1342727 1 NC_017304.1 TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: cce:Ccel_0605 RNA binding metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; metal dependent phosphohydrolase 1342727 12420840 Clo1313_1122 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005687637.1 1341153 D 637887 CDS YP_005687638.1 385778473 12420841 1342852..1343634 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: cce:Ccel_0606 metallophosphoesterase; metallophosphoesterase 1343634 12420841 Clo1313_1123 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005687638.1 1342852 D 637887 CDS YP_005687639.1 385778474 12420842 1343800..1344066 1 NC_017304.1 PFAM: Stage V sporulation protein S; KEGG: bse:Bsel_1814 stage V sporulation protein S; Stage V sporulation protein S 1344066 12420842 Clo1313_1124 Clostridium thermocellum DSM 1313 Stage V sporulation protein S YP_005687639.1 1343800 D 637887 CDS YP_005687640.1 385778475 12420843 1344338..1345078 1 NC_017304.1 KEGG: clj:CLJU_c18800 hypothetical protein; hypothetical protein 1345078 12420843 Clo1313_1125 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687640.1 1344338 D 637887 CDS YP_005687641.1 385778476 12420844 1345147..1345410 1 NC_017304.1 KEGG: aag:AaeL_AAEL003410 hypothetical protein; hypothetical protein 1345410 12420844 Clo1313_1126 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687641.1 1345147 D 637887 CDS YP_005687642.1 385778477 12420845 complement(1345488..1346474) 1 NC_017304.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cbh:CLC_2000 dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase 1346474 12420845 Clo1313_1127 Clostridium thermocellum DSM 1313 NAD-dependent epimerase/dehydratase YP_005687642.1 1345488 R 637887 CDS YP_005687643.1 385778478 12420846 complement(1346546..1347838) 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: dae:Dtox_1092 glycosyl transferase group 1; group 1 glycosyl transferase 1347838 12420846 Clo1313_1128 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005687643.1 1346546 R 637887 CDS YP_005687644.1 385778479 12420847 complement(1347855..1348892) 1 NC_017304.1 KEGG: dae:Dtox_1090 spore coat protein, CotS family; TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase; CotS family spore coat protein 1348892 12420847 Clo1313_1129 Clostridium thermocellum DSM 1313 CotS family spore coat protein YP_005687644.1 1347855 R 637887 CDS YP_005687645.1 385778480 12420848 complement(1348898..1349947) 1 NC_017304.1 KEGG: dae:Dtox_1091 spore coat protein, CotS family; TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase; CotS family spore coat protein 1349947 12420848 Clo1313_1130 Clostridium thermocellum DSM 1313 CotS family spore coat protein YP_005687645.1 1348898 R 637887 CDS YP_005687646.1 385778481 12420849 complement(1350062..1350319) 1 NC_017304.1 KEGG: ath:AT4G20810 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein; transcription initiation factor IIE subunit alpha family protein 1350319 12420849 Clo1313_1131 Clostridium thermocellum DSM 1313 transcription initiation factor IIE subunit alpha family protein YP_005687646.1 1350062 R 637887 CDS YP_005687647.1 385778482 12420850 complement(1350483..1350950) 1 NC_017304.1 KEGG: tva:TVAG_087170 viral A-type inclusion protein; hypothetical protein 1350950 12420850 Clo1313_1132 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687647.1 1350483 R 637887 CDS YP_005687648.1 385778483 12420851 complement(1351160..1351483) 1 NC_017304.1 KEGG: hmo:HM1_2795 hypothetical protein; hypothetical protein 1351483 12420851 Clo1313_1133 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687648.1 1351160 R 637887 CDS YP_005687649.1 385778484 12420852 1351854..1354316 1 NC_017304.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cce:Ccel_1940 nucleotidyl transferase; nucleotidyltransferase 1354316 12420852 Clo1313_1134 Clostridium thermocellum DSM 1313 nucleotidyltransferase YP_005687649.1 1351854 D 637887 CDS YP_005687650.1 385778485 12420853 complement(1354376..1354693) 1 NC_017304.1 KEGG: ate:Athe_1149 hypothetical protein; hypothetical protein 1354693 12420853 Clo1313_1135 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687650.1 1354376 R 637887 CDS YP_005687651.1 385778486 12420854 complement(1354830..1355459) 1 NC_017304.1 KEGG: bpy:Bphyt_4124 transcriptional regulator, LysR family; hypothetical protein 1355459 12420854 Clo1313_1136 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687651.1 1354830 R 637887 CDS YP_005687652.1 385778487 12420855 1355689..1356402 1 NC_017304.1 PFAM: protein of unknown function DUF881; KEGG: cce:Ccel_0569 protein of unknown function DUF881; hypothetical protein 1356402 12420855 Clo1313_1137 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687652.1 1355689 D 637887 CDS YP_005687653.1 385778488 12420856 1356402..1357103 1 NC_017304.1 PFAM: protein of unknown function DUF881; KEGG: cce:Ccel_0570 protein of unknown function DUF881; hypothetical protein 1357103 12420856 Clo1313_1138 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687653.1 1356402 D 637887 CDS YP_005687654.1 385778489 12420857 1357336..1358298 1 NC_017304.1 KEGG: cce:Ccel_0571 polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; PFAM: polysaccharide deacetylase; delta-lactam-biosynthetic de-N-acetylase 1358298 12420857 Clo1313_1139 Clostridium thermocellum DSM 1313 delta-lactam-biosynthetic de-N-acetylase YP_005687654.1 1357336 D 637887 CDS YP_005687655.1 385778490 12420858 1358394..1358711 1 NC_017304.1 KEGG: cce:Ccel_0572 sporulation protein YqfC; sporulation protein YqfC 1358711 12420858 Clo1313_1140 Clostridium thermocellum DSM 1313 sporulation protein YqfC YP_005687655.1 1358394 D 637887 CDS YP_005687656.1 385778491 12420859 1358727..1359923 1 NC_017304.1 KEGG: cce:Ccel_0573 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD; sporulation protein YqfD 1359923 12420859 Clo1313_1141 Clostridium thermocellum DSM 1313 sporulation protein YqfD YP_005687656.1 1358727 D 637887 CDS YP_005687657.1 385778492 12420860 1359924..1360925 1 NC_017304.1 PFAM: PhoH family protein; KEGG: cce:Ccel_0574 PhoH family protein; PhoH family protein 1360925 12420860 Clo1313_1142 Clostridium thermocellum DSM 1313 PhoH family protein YP_005687657.1 1359924 D 637887 CDS YP_005687658.1 385778493 12420861 1360969..1363170 1 NC_017304.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase HD sub domain; KEGG: cce:Ccel_0575 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; 7TM receptor with intracellular metal dependent phosphohydrolase 1363170 12420861 Clo1313_1143 Clostridium thermocellum DSM 1313 7TM receptor with intracellular metal dependent phosphohydrolase YP_005687658.1 1360969 D 637887 CDS YP_005687659.1 385778494 12420862 1363271..1363759 1 NC_017304.1 PFAM: protein of unknown function UPF0054; KEGG: cce:Ccel_0576 protein of unknown function UPF0054; hypothetical protein 1363759 12420862 Clo1313_1144 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687659.1 1363271 D 637887 CDS YP_005687660.1 385778495 12420863 1363975..1364361 1 NC_017304.1 KEGG: ckr:CKR_0828 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; cytidine deaminase 1364361 12420863 Clo1313_1145 Clostridium thermocellum DSM 1313 cytidine deaminase YP_005687660.1 1363975 D 637887 CDS YP_005687661.1 385778496 12420864 1364417..1365310 1 NC_017304.1 KEGG: cce:Ccel_0579 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era 1365310 12420864 Clo1313_1146 Clostridium thermocellum DSM 1313 GTP-binding protein Era YP_005687661.1 1364417 D 637887 CDS YP_005687662.1 385778497 12420865 1365459..1365602 1 NC_017304.1 KEGG: cce:Ccel_0580 hypothetical protein; hypothetical protein 1365602 12420865 Clo1313_1147 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687662.1 1365459 D 637887 CDS YP_005687663.1 385778498 12420866 1365618..1366373 1 NC_017304.1 KEGG: cce:Ccel_0581 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 1366373 12420866 Clo1313_1148 Clostridium thermocellum DSM 1313 DNA repair protein RecO YP_005687663.1 1365618 D 637887 CDS YP_005687664.1 385778499 12420867 1366914..1367576 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: ddf:DEFDS_0952 type IV pilus assembly protein PilZ; type IV pilus assembly PilZ 1367576 12420867 Clo1313_1149 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005687664.1 1366914 D 637887 CDS YP_005687665.1 385778500 12420868 1367852..1369015 1 NC_017304.1 KEGG: cce:Ccel_1684 aminotransferase class V; PFAM: aminotransferase class V; cysteine desulfurase 1369015 12420868 Clo1313_1150 Clostridium thermocellum DSM 1313 cysteine desulfurase YP_005687665.1 1367852 D 637887 CDS YP_005687666.1 385778501 12420869 1369012..1370190 1 NC_017304.1 KEGG: cce:Ccel_1683 thiamine biosynthesis/tRNA modification protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein; thiamine biosynthesis/tRNA modification protein ThiI 1370190 12420869 Clo1313_1151 Clostridium thermocellum DSM 1313 thiamine biosynthesis/tRNA modification protein ThiI YP_005687666.1 1369012 D 637887 CDS YP_005687667.1 385778502 12420870 1370311..1371735 1 NC_017304.1 PFAM: VanW family protein; G5 domain protein; KEGG: tte:TTE1768 hypothetical protein; VanW family protein 1371735 12420870 Clo1313_1152 Clostridium thermocellum DSM 1313 VanW family protein YP_005687667.1 1370311 D 637887 CDS YP_005687668.1 385778503 12420871 1371753..1372439 1 NC_017304.1 PFAM: Protein of unknown function DUF2225; KEGG: cce:Ccel_1682 hypothetical protein; hypothetical protein 1372439 12420871 Clo1313_1153 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687668.1 1371753 D 637887 CDS YP_005687669.1 385778504 12420872 1372581..1373564 1 NC_017304.1 PFAM: AIR synthase related protein domain protein; AIR synthase related protein; KEGG: cce:Ccel_1681 AIR synthase related protein domain protein; AIR synthase domain-containing protein 1373564 12420872 Clo1313_1154 Clostridium thermocellum DSM 1313 AIR synthase domain-containing protein YP_005687669.1 1372581 D 637887 CDS YP_005687670.1 385778505 12420873 1373997..1375235 1 NC_017304.1 KEGG: cce:Ccel_1680 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 1375235 12420873 Clo1313_1155 Clostridium thermocellum DSM 1313 glycine hydroxymethyltransferase YP_005687670.1 1373997 D 637887 CDS YP_005687671.1 385778506 12420874 1375371..1375565 1 NC_017304.1 PFAM: PspC domain protein; KEGG: mvo:Mvol_0264 phage shock protein C, PspC; phage shock protein C, PspC 1375565 12420874 Clo1313_1156 Clostridium thermocellum DSM 1313 phage shock protein C, PspC YP_005687671.1 1375371 D 637887 CDS YP_005687672.1 385778507 12420875 complement(1375701..1378373) 1 NC_017304.1 KEGG: cce:Ccel_1711 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; transglutaminase domain-containing protein 1378373 12420875 Clo1313_1157 Clostridium thermocellum DSM 1313 transglutaminase domain-containing protein YP_005687672.1 1375701 R 637887 CDS YP_005687673.1 385778508 12420876 complement(1378407..1379615) 1 NC_017304.1 PFAM: protein of unknown function DUF58; KEGG: cce:Ccel_1710 protein of unknown function DUF58; hypothetical protein 1379615 12420876 Clo1313_1158 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687673.1 1378407 R 637887 CDS YP_005687674.1 385778509 12420877 complement(1379602..1380558) 1 NC_017304.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: cce:Ccel_1709 ATPase associated with various cellular activities AAA_3; ATPase 1380558 12420877 Clo1313_1159 Clostridium thermocellum DSM 1313 ATPase YP_005687674.1 1379602 R 637887 CDS YP_005687675.1 385778510 12420878 complement(1380680..1381633) 1 NC_017304.1 KEGG: cce:Ccel_2485 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; L-lactate dehydrogenase 1381633 12420878 Clo1313_1160 Clostridium thermocellum DSM 1313 L-lactate dehydrogenase YP_005687675.1 1380680 R 637887 CDS YP_005687676.1 385778511 12420879 1381870..1383111 1 NC_017304.1 SMART: molybdopterin binding domain; manually curated; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; KEGG: cce:Ccel_0674 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; competence/damage-inducible protein CinA 1383111 12420879 Clo1313_1161 Clostridium thermocellum DSM 1313 competence/damage-inducible protein CinA YP_005687676.1 1381870 D 637887 CDS YP_005687677.1 385778512 12420880 1383156..1384733 1 NC_017304.1 KEGG: cce:Ccel_0675 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 1384733 12420880 Clo1313_1162 Clostridium thermocellum DSM 1313 integral membrane protein MviN YP_005687677.1 1383156 D 637887 CDS YP_005687678.1 385778513 12420881 1384834..1385883 1 NC_017304.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: cce:Ccel_0676 RecA protein; SMART: AAA ATPase; recA protein 1385883 12420881 Clo1313_1163 Clostridium thermocellum DSM 1313 recA protein YP_005687678.1 1384834 D 637887 CDS YP_005687679.1 385778514 12420882 1386297..1386917 1 NC_017304.1 PFAM: regulatory protein RecX; KEGG: cce:Ccel_0677 regulatory protein RecX; regulatory protein RecX 1386917 12420882 Clo1313_1164 Clostridium thermocellum DSM 1313 regulatory protein RecX YP_005687679.1 1386297 D 637887 CDS YP_005687680.1 385778515 12420883 1386954..1388489 1 NC_017304.1 KEGG: cce:Ccel_1860 rhomboid family protein; PFAM: Rhomboid family protein; SMART: Tetratricopeptide repeat; rhomboid family protein 1388489 12420883 Clo1313_1165 Clostridium thermocellum DSM 1313 rhomboid family protein YP_005687680.1 1386954 D 637887 CDS YP_005687681.1 385778516 12420884 1388733..1389278 1 NC_017304.1 KEGG: pkn:PKH_021530 hypothetical protein; hypothetical protein 1389278 12420884 Clo1313_1166 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687681.1 1388733 D 637887 CDS YP_005687682.1 385778517 12420885 1389564..1390904 1 NC_017304.1 PFAM: extracellular solute-binding protein family 1; KEGG: gym:GYMC10_3306 extracellular solute-binding protein family 1; extracellular solute-binding protein 1390904 12420885 Clo1313_1167 Clostridium thermocellum DSM 1313 extracellular solute-binding protein YP_005687682.1 1389564 D 637887 CDS YP_005687683.1 385778518 12420886 complement(1391267..1391593) 1 NC_017304.1 KEGG: msm:MSMEG_2631 MATE efflux family protein; hypothetical protein 1391593 12420886 Clo1313_1168 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687683.1 1391267 R 637887 CDS YP_005687684.1 385778519 12420887 complement(1391785..1392114) 1 NC_017304.1 KEGG: sde:Sde_2333 hypothetical protein; hypothetical protein 1392114 12420887 Clo1313_1169 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687684.1 1391785 R 637887 CDS YP_005687685.1 385778520 12420888 complement(1392176..1392418) 1 NC_017304.1 KEGG: tet:TTHERM_00019670 hypothetical protein; hypothetical protein 1392418 12420888 Clo1313_1170 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687685.1 1392176 R 637887 CDS YP_005687686.1 385778521 12420890 1392974..1393513 1 NC_017304.1 KEGG: sto:ST1713 hypothetical protein; hypothetical protein 1393513 12420890 Clo1313_1171 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687686.1 1392974 D 637887 CDS YP_005687687.1 385778522 12420891 1393660..1395060 1 NC_017304.1 KEGG: cce:Ccel_1726 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1395060 12420891 Clo1313_1172 Clostridium thermocellum DSM 1313 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_005687687.1 1393660 D 637887 CDS YP_005687688.1 385778523 12420895 1395666..1396676 1 NC_017304.1 KEGG: cce:Ccel_1954 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 1396676 12420895 Clo1313_1173 Clostridium thermocellum DSM 1313 DNA polymerase III subunit delta YP_005687688.1 1395666 D 637887 CDS YP_005687689.1 385778524 12420896 complement(1396762..1397031) 1 NC_017304.1 KEGG: cce:Ccel_1979 ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 1397031 12420896 Clo1313_1174 Clostridium thermocellum DSM 1313 30S ribosomal protein S20 YP_005687689.1 1396762 R 637887 CDS YP_005687690.1 385778525 12420897 1397266..1398255 1 NC_017304.1 TIGRFAM: spore protease; KEGG: cce:Ccel_1978 germination protease; PFAM: peptidase M63 germination protease; spore protease 1398255 12420897 Clo1313_1175 Clostridium thermocellum DSM 1313 spore protease YP_005687690.1 1397266 D 637887 CDS YP_005687691.1 385778526 12420898 1398483..1399331 1 NC_017304.1 KEGG: cce:Ccel_1350 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 1399331 12420898 Clo1313_1176 Clostridium thermocellum DSM 1313 cell wall hydrolase/autolysin YP_005687691.1 1398483 D 637887 CDS YP_005687692.1 385778527 12420899 1399567..1400262 1 NC_017304.1 KEGG: cce:Ccel_1977 hypothetical protein; hypothetical protein 1400262 12420899 Clo1313_1177 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687692.1 1399567 D 637887 CDS YP_005687693.1 385778528 12420900 1400369..1402360 1 NC_017304.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: tpd:Teth39_1694 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; NAD-dependent DNA ligase 1402360 12420900 Clo1313_1178 Clostridium thermocellum DSM 1313 NAD-dependent DNA ligase YP_005687693.1 1400369 D 637887 CDS YP_005687694.1 385778529 12420901 1402496..1402615 1 NC_017304.1 hypothetical protein 1402615 12420901 Clo1313_1179 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687694.1 1402496 D 637887 CDS YP_005687695.1 385778530 12420902 1402633..1403190 1 NC_017304.1 KEGG: cce:Ccel_0473 prolipoprotein diacylglyceryl transferase; hypothetical protein 1403190 12420902 Clo1313_1180 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687695.1 1402633 D 637887 CDS YP_005687696.1 385778531 12420903 1403426..1403713 1 NC_017304.1 KEGG: tte:TTE0606 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 1403713 12420903 Clo1313_1181 Clostridium thermocellum DSM 1313 glutamyl-tRNA(Gln) amidotransferase subunit C YP_005687696.1 1403426 D 637887 CDS YP_005687697.1 385778532 12420904 1403755..1405215 1 NC_017304.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: ate:Athe_0761 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 1405215 12420904 Clo1313_1182 Clostridium thermocellum DSM 1313 glutamyl-tRNA(Gln) amidotransferase subunit A YP_005687697.1 1403755 D 637887 CDS YP_005687698.1 385778533 12420905 1405229..1406662 1 NC_017304.1 KEGG: ate:Athe_0762 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 1406662 12420905 Clo1313_1183 Clostridium thermocellum DSM 1313 glutamyl-tRNA(Gln) amidotransferase subunit B YP_005687698.1 1405229 D 637887 CDS YP_005687699.1 385778534 12420906 1406722..1407546 1 NC_017304.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cce:Ccel_3209 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1407546 12420906 Clo1313_1184 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687699.1 1406722 D 637887 CDS YP_005687700.1 385778535 12420907 1407737..1408813 1 NC_017304.1 KEGG: cce:Ccel_2137 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase 1408813 12420907 Clo1313_1185 Clostridium thermocellum DSM 1313 phosphate acetyltransferase YP_005687700.1 1407737 D 637887 CDS YP_005687701.1 385778536 12420908 1408931..1410130 1 NC_017304.1 KEGG: cce:Ccel_2136 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 1410130 12420908 Clo1313_1186 Clostridium thermocellum DSM 1313 acetate kinase YP_005687701.1 1408931 D 637887 CDS YP_005687702.1 385778537 12420909 1410372..1410875 1 NC_017304.1 PFAM: protein of unknown function DUF177; KEGG: cce:Ccel_2135 protein of unknown function DUF177; hypothetical protein 1410875 12420909 Clo1313_1187 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687702.1 1410372 D 637887 CDS YP_005687703.1 385778538 12420910 1410978..1411178 1 NC_017304.1 KEGG: cce:Ccel_2134 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 1411178 12420910 Clo1313_1188 Clostridium thermocellum DSM 1313 50S ribosomal protein L32 YP_005687703.1 1410978 D 637887 CDS YP_005687704.1 385778539 12420911 1411284..1412606 1 NC_017304.1 PFAM: protein of unknown function DUF512; Radical SAM domain protein; PDZ/DHR/GLGF domain protein; KEGG: cce:Ccel_2132 protein of unknown function DUF512; hypothetical protein 1412606 12420911 Clo1313_1189 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687704.1 1411284 D 637887 CDS YP_005687705.1 385778540 12420912 1412656..1413978 1 NC_017304.1 KEGG: cce:Ccel_2131 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 1413978 12420912 Clo1313_1190 Clostridium thermocellum DSM 1313 ribosome-associated GTPase EngA YP_005687705.1 1412656 D 637887 CDS YP_005687706.1 385778541 12420913 1413984..1414634 1 NC_017304.1 PFAM: protein of unknown function DUF205; KEGG: cce:Ccel_2130 protein of unknown function DUF205; hypothetical protein 1414634 12420913 Clo1313_1191 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687706.1 1413984 D 637887 CDS YP_005687707.1 385778542 12420914 1414648..1415667 1 NC_017304.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cce:Ccel_2129 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 1415667 12420914 Clo1313_1192 Clostridium thermocellum DSM 1313 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_005687707.1 1414648 D 637887 CDS YP_005687708.1 385778543 12420915 1416014..1417492 1 NC_017304.1 KEGG: amt:Amet_2854 sporulation stage IV, protein A; TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A; stage IV sporulation protein A 1417492 12420915 Clo1313_1193 Clostridium thermocellum DSM 1313 stage IV sporulation protein A YP_005687708.1 1416014 D 637887 CDS YP_005687709.1 385778544 12420916 1418175..1419554 1 NC_017304.1 PFAM: extracellular solute-binding protein family 1; KEGG: ttj:TTHB082 sugar ABC transporter, periplasmic sugar-binding protein; extracellular solute-binding protein 1419554 12420916 Clo1313_1194 Clostridium thermocellum DSM 1313 extracellular solute-binding protein YP_005687709.1 1418175 D 637887 CDS YP_005687710.1 385778545 12420917 1419706..1420689 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tth:TT_P0040 putative transmembrane sugar transport protein; binding-protein-dependent transport system inner membrane protein 1420689 12420917 Clo1313_1195 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005687710.1 1419706 D 637887 CDS YP_005687711.1 385778546 12420918 1420689..1421558 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ttj:TTHB086 sugar ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1421558 12420918 Clo1313_1196 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005687711.1 1420689 D 637887 CDS YP_005687712.1 385778547 12420919 1421837..1422133 1 NC_017304.1 manually curated; KEGG: cce:Ccel_1467 hypothetical protein; hypothetical protein 1422133 12420919 Clo1313_1197 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687712.1 1421837 D 637887 CDS YP_005687713.1 385778548 12420920 1422290..1423348 1 NC_017304.1 KEGG: cce:Ccel_1350 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 1423348 12420920 Clo1313_1198 Clostridium thermocellum DSM 1313 cell wall hydrolase/autolysin YP_005687713.1 1422290 D 637887 CDS YP_005687714.1 385778549 12420921 1423723..1424145 1 NC_017304.1 KEGG: cce:Ccel_1185 hypothetical protein; hypothetical protein 1424145 12420921 Clo1313_1199 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687714.1 1423723 D 637887 CDS YP_005687715.1 385778550 12420922 complement(1424199..1424411) 1 NC_017304.1 KEGG: tet:TTHERM_00520920 RNB-like protein; hypothetical protein 1424411 12420922 Clo1313_1200 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687715.1 1424199 R 637887 CDS YP_005687716.1 385778551 12420923 1424641..1427022 1 NC_017304.1 TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; KEGG: cce:Ccel_1470 MutS2 family protein; SMART: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; MutS III domain protein; MutS2 family protein 1427022 12420923 Clo1313_1201 Clostridium thermocellum DSM 1313 MutS2 family protein YP_005687716.1 1424641 D 637887 CDS YP_005687717.1 385778552 12420924 1427352..1428434 1 NC_017304.1 KEGG: cce:Ccel_3372 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; sporulation integral membrane protein YtvI 1428434 12420924 Clo1313_1202 Clostridium thermocellum DSM 1313 sporulation integral membrane protein YtvI YP_005687717.1 1427352 D 637887 CDS YP_005687718.1 385778553 12420925 complement(1428499..1429209) 1 NC_017304.1 KEGG: tmt:Tmath_1108 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 28 subunit SigK 1429209 12420925 Clo1313_1203 Clostridium thermocellum DSM 1313 RNA polymerase sigma 28 subunit SigK YP_005687718.1 1428499 R 637887 CDS YP_005687719.1 385778554 12420926 complement(1429288..1430943) 1 NC_017304.1 KEGG: cce:Ccel_1486 penicillin-binding protein transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase 1430943 12420926 Clo1313_1204 Clostridium thermocellum DSM 1313 peptidoglycan glycosyltransferase YP_005687719.1 1429288 R 637887 CDS YP_005687720.1 385778555 12420927 complement(1431241..1432476) 1 NC_017304.1 PFAM: peptidase U32; KEGG: cce:Ccel_1474 peptidase U32; peptidase U32 1432476 12420927 Clo1313_1205 Clostridium thermocellum DSM 1313 peptidase U32 YP_005687720.1 1431241 R 637887 CDS YP_005687721.1 385778556 12420928 complement(1432538..1433176) 1 NC_017304.1 PFAM: O-methyltransferase family 3; KEGG: cce:Ccel_1473 O-methyltransferase family 3; O-methyltransferase family protein 1433176 12420928 Clo1313_1206 Clostridium thermocellum DSM 1313 O-methyltransferase family protein YP_005687721.1 1432538 R 637887 CDS YP_005687722.1 385778557 12420929 complement(1433298..1434419) 1 NC_017304.1 PFAM: aminodeoxychorismate lyase; KEGG: cce:Ccel_1472 aminodeoxychorismate lyase; aminodeoxychorismate lyase 1434419 12420929 Clo1313_1207 Clostridium thermocellum DSM 1313 aminodeoxychorismate lyase YP_005687722.1 1433298 R 637887 CDS YP_005687723.1 385778558 12420930 complement(1434580..1436424) 1 NC_017304.1 KEGG: cce:Ccel_1471 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein TypA 1436424 12420930 Clo1313_1208 Clostridium thermocellum DSM 1313 GTP-binding protein TypA YP_005687723.1 1434580 R 637887 CDS YP_005687724.1 385778559 12420931 1436718..1437476 1 NC_017304.1 KEGG: cce:Ccel_0442 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 1437476 12420931 Clo1313_1209 Clostridium thermocellum DSM 1313 30S ribosomal protein S2 YP_005687724.1 1436718 D 637887 CDS YP_005687725.1 385778560 12420932 1437672..1438319 1 NC_017304.1 KEGG: cce:Ccel_0443 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 1438319 12420932 Clo1313_1210 Clostridium thermocellum DSM 1313 translation elongation factor Ts YP_005687725.1 1437672 D 637887 CDS YP_005687726.1 385778561 12420933 1438460..1439167 1 NC_017304.1 KEGG: amt:Amet_2687 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 1439167 12420933 Clo1313_1211 Clostridium thermocellum DSM 1313 uridylate kinase YP_005687726.1 1438460 D 637887 CDS YP_005687727.1 385778562 12420934 1439187..1439738 1 NC_017304.1 KEGG: cce:Ccel_0445 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 1439738 12420934 Clo1313_1212 Clostridium thermocellum DSM 1313 ribosome recycling factor YP_005687727.1 1439187 D 637887 CDS YP_005687728.1 385778563 12420935 1439741..1439941 1 NC_017304.1 KEGG: cce:Ccel_0446 hypothetical protein; hypothetical protein 1439941 12420935 Clo1313_1213 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687728.1 1439741 D 637887 CDS YP_005687729.1 385778564 12420936 1440063..1440821 1 NC_017304.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: cce:Ccel_0447 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1440821 12420936 Clo1313_1214 Clostridium thermocellum DSM 1313 undecaprenyl diphosphate synthase YP_005687729.1 1440063 D 637887 CDS YP_005687730.1 385778565 12420937 1440824..1441660 1 NC_017304.1 KEGG: cce:Ccel_0448 phosphatidate cytidylyltransferase; manually curated; PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1441660 12420937 Clo1313_1215 Clostridium thermocellum DSM 1313 phosphatidate cytidylyltransferase YP_005687730.1 1440824 D 637887 CDS YP_005687731.1 385778566 12420938 1441693..1442838 1 NC_017304.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: cce:Ccel_0449 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1442838 12420938 Clo1313_1216 Clostridium thermocellum DSM 1313 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005687731.1 1441693 D 637887 CDS YP_005687732.1 385778567 12420939 1443020..1444294 1 NC_017304.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: cce:Ccel_0450 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1444294 12420939 Clo1313_1217 Clostridium thermocellum DSM 1313 membrane-associated zinc metalloprotease YP_005687732.1 1443020 D 637887 CDS YP_005687733.1 385778568 12420940 1444525..1445583 1 NC_017304.1 KEGG: cce:Ccel_0451 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1445583 12420940 Clo1313_1218 Clostridium thermocellum DSM 1313 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_005687733.1 1444525 D 637887 CDS YP_005687734.1 385778569 12420941 1445601..1449929 1 NC_017304.1 SMART: Exonuclease; phosphoesterase PHP domain protein; manually curated; KEGG: cce:Ccel_0452 DNA polymerase III PolC; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 1449929 12420941 Clo1313_1219 Clostridium thermocellum DSM 1313 DNA polymerase III subunit alpha YP_005687734.1 1445601 D 637887 CDS YP_005687735.1 385778570 12420942 1449929..1450024 1 NC_017304.1 manually curated; hypothetical protein 1450024 12420942 Clo1313_1220 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687735.1 1449929 D 637887 CDS YP_005687736.1 385778571 12420943 1450281..1450745 1 NC_017304.1 KEGG: cce:Ccel_0453 protein of unknown function DUF150; manually curated; PFAM: protein of unknown function DUF150; hypothetical protein 1450745 12420943 Clo1313_1221 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687736.1 1450281 D 637887 CDS YP_005687737.1 385778572 12420944 1450833..1452047 1 NC_017304.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; KEGG: cce:Ccel_0454 NusA antitermination factor; SMART: KH domain protein; NusA antitermination factor 1452047 12420944 Clo1313_1222 Clostridium thermocellum DSM 1313 NusA antitermination factor YP_005687737.1 1450833 D 637887 CDS YP_005687738.1 385778573 12420945 1452130..1452408 1 NC_017304.1 PFAM: protein of unknown function DUF448; KEGG: cce:Ccel_0455 protein of unknown function DUF448; hypothetical protein 1452408 12420945 Clo1313_1223 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687738.1 1452130 D 637887 CDS YP_005687739.1 385778574 12420946 1452395..1452748 1 NC_017304.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: cce:Ccel_0456 ribosomal protein L7Ae/L30e/S12e/Gadd45; ribosomal protein L7Ae/L30e/S12e/Gadd45 1452748 12420946 Clo1313_1224 Clostridium thermocellum DSM 1313 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_005687739.1 1452395 D 637887 CDS YP_005687740.1 385778575 12420947 1452726..1455833 1 NC_017304.1 manually curated; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; KEGG: cce:Ccel_0457 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 1455833 12420947 Clo1313_1225 Clostridium thermocellum DSM 1313 translation initiation factor IF-2 YP_005687740.1 1452726 D 637887 CDS YP_005687741.1 385778576 12420948 1455897..1456268 1 NC_017304.1 manually curated; TIGRFAM: ribosome-binding factor A; KEGG: cce:Ccel_0458 ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 1456268 12420948 Clo1313_1226 Clostridium thermocellum DSM 1313 ribosome-binding factor A YP_005687741.1 1455897 D 637887 CDS YP_005687742.1 385778577 12420949 1456319..1457275 1 NC_017304.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cce:Ccel_0459 phosphoesterase RecJ domain protein; phosphoesterase RecJ domain-containing protein 1457275 12420949 Clo1313_1227 Clostridium thermocellum DSM 1313 phosphoesterase RecJ domain-containing protein YP_005687742.1 1456319 D 637887 CDS YP_005687743.1 385778578 12420950 1457279..1458172 1 NC_017304.1 KEGG: amt:Amet_2670 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 1458172 12420950 Clo1313_1228 Clostridium thermocellum DSM 1313 tRNA pseudouridine synthase B YP_005687743.1 1457279 D 637887 CDS YP_005687744.1 385778579 12420951 1458239..1459177 1 NC_017304.1 KEGG: cce:Ccel_0461 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; riboflavin biosynthesis protein RibF 1459177 12420951 Clo1313_1229 Clostridium thermocellum DSM 1313 riboflavin biosynthesis protein RibF YP_005687744.1 1458239 D 637887 CDS YP_005687745.1 385778580 12420952 complement(1459224..1459391) 1 NC_017304.1 KEGG: cwo:Cwoe_2766 membrane protein; hypothetical protein 1459391 12420952 Clo1313_1230 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687745.1 1459224 R 637887 CDS YP_005687746.1 385778581 12420953 1459562..1460854 1 NC_017304.1 PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_0471 peptidase M16 domain protein; peptidase M16 domain-containing protein 1460854 12420953 Clo1313_1231 Clostridium thermocellum DSM 1313 peptidase M16 domain-containing protein YP_005687746.1 1459562 D 637887 CDS YP_005687747.1 385778582 12420954 1460897..1462174 1 NC_017304.1 KEGG: cce:Ccel_0472 peptidase M16 domain protein; manually curated; PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 1462174 12420954 Clo1313_1232 Clostridium thermocellum DSM 1313 peptidase M16 domain-containing protein YP_005687747.1 1460897 D 637887 CDS YP_005687748.1 385778583 12420955 1462192..1463154 1 NC_017304.1 KEGG: cce:Ccel_0473 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 1463154 12420955 Clo1313_1233 Clostridium thermocellum DSM 1313 prolipoprotein diacylglyceryl transferase YP_005687748.1 1462192 D 637887 CDS YP_005687749.1 385778584 12420956 1463337..1463489 1 NC_017304.1 KEGG: amt:Amet_2889 hypothetical protein; hypothetical protein 1463489 12420956 Clo1313_1234 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687749.1 1463337 D 637887 CDS YP_005687750.1 385778585 12420957 1463699..1464829 1 NC_017304.1 KEGG: cce:Ccel_0474 rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; rod shape-determining protein RodA 1464829 12420957 Clo1313_1235 Clostridium thermocellum DSM 1313 rod shape-determining protein RodA YP_005687750.1 1463699 D 637887 CDS YP_005687751.1 385778586 12420958 1465075..1465509 1 NC_017304.1 KEGG: cce:Ccel_0475 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain; MraZ protein 1465509 12420958 Clo1313_1236 Clostridium thermocellum DSM 1313 MraZ protein YP_005687751.1 1465075 D 637887 CDS YP_005687752.1 385778587 12420959 1465559..1466500 1 NC_017304.1 KEGG: cce:Ccel_0476 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 1466500 12420959 Clo1313_1237 Clostridium thermocellum DSM 1313 S-adenosyl-methyltransferase MraW YP_005687752.1 1465559 D 637887 CDS YP_005687753.1 385778588 12420960 1466939..1467427 1 NC_017304.1 KEGG: cce:Ccel_0477 cell division protein FtsL; cell division protein FtsL 1467427 12420960 Clo1313_1238 Clostridium thermocellum DSM 1313 cell division protein FtsL YP_005687753.1 1466939 D 637887 CDS YP_005687754.1 385778589 12420961 1467628..1469799 1 NC_017304.1 KEGG: cce:Ccel_0478 penicillin-binding protein transpeptidase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; SMART: PASTA domain containing protein; penicillin-binding protein transpeptidase 1469799 12420961 Clo1313_1239 Clostridium thermocellum DSM 1313 penicillin-binding protein transpeptidase YP_005687754.1 1467628 D 637887 CDS YP_005687755.1 385778590 12420962 1469877..1471334 1 NC_017304.1 KEGG: cce:Ccel_0479 UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase 1471334 12420962 Clo1313_1240 Clostridium thermocellum DSM 1313 UDP-N-acetylmuramyl tripeptide synthetase YP_005687755.1 1469877 D 637887 CDS YP_005687756.1 385778591 12420963 1471356..1472729 1 NC_017304.1 KEGG: cce:Ccel_0480 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1472729 12420963 Clo1313_1241 Clostridium thermocellum DSM 1313 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_005687756.1 1471356 D 637887 CDS YP_005687757.1 385778592 12420964 1472817..1473803 1 NC_017304.1 KEGG: cce:Ccel_0481 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 1473803 12420964 Clo1313_1242 Clostridium thermocellum DSM 1313 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005687757.1 1472817 D 637887 CDS YP_005687758.1 385778593 12420965 1473884..1475035 1 NC_017304.1 KEGG: cce:Ccel_0482 cell division protein FtsW; TIGRFAM: stage V sporulation protein E; cell division protein FtsW; PFAM: cell cycle protein; stage V sporulation protein E 1475035 12420965 Clo1313_1243 Clostridium thermocellum DSM 1313 stage V sporulation protein E YP_005687758.1 1473884 D 637887 CDS YP_005687759.1 385778594 12420966 1475048..1476157 1 NC_017304.1 KEGG: cce:Ccel_0483 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 1476157 12420966 Clo1313_1244 Clostridium thermocellum DSM 1313 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_005687759.1 1475048 D 637887 CDS YP_005687760.1 385778595 12420967 1476355..1476729 1 NC_017304.1 KEGG: aoe:Clos_1380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1476729 12420967 Clo1313_1245 Clostridium thermocellum DSM 1313 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005687760.1 1476355 D 637887 CDS YP_005687761.1 385778596 12420968 1476970..1477578 1 NC_017304.1 KEGG: pfa:PF14_0372 conserved Plasmodium protein, unknown function; hypothetical protein 1477578 12420968 Clo1313_1246 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687761.1 1476970 D 637887 CDS YP_005687762.1 385778597 12420970 complement(1478127..1479350) 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 1479350 12420970 Clo1313_1248 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687762.1 1478127 R 637887 CDS YP_005687763.1 385778598 12420971 1479986..1482106 1 NC_017304.1 PFAM: UvrD/REP helicase; KEGG: ctc:CTC00692 DNA helicase II; UvrD/REP helicase 1482106 12420971 Clo1313_1249 Clostridium thermocellum DSM 1313 UvrD/REP helicase YP_005687763.1 1479986 D 637887 CDS YP_005687764.1 385778599 12420973 complement(1483008..1483442) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_1257 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 1483442 12420973 Clo1313_1250 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687764.1 1483008 R 637887 CDS YP_005687765.1 385778600 12420974 1483683..1484213 1 NC_017304.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: tpd:Teth39_1505 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 1484213 12420974 Clo1313_1251 Clostridium thermocellum DSM 1313 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_005687765.1 1483683 D 637887 CDS YP_005687766.1 385778601 12420975 complement(1484300..1484758) 1 NC_017304.1 PFAM: amino acid-binding ACT domain protein; KEGG: cce:Ccel_0524 amino acid-binding ACT domain protein; amino acid-binding ACT protein 1484758 12420975 Clo1313_1252 Clostridium thermocellum DSM 1313 amino acid-binding ACT protein YP_005687766.1 1484300 R 637887 CDS YP_005687767.1 385778602 12420976 complement(1484781..1485539) 1 NC_017304.1 PFAM: dihydrodipicolinate reductase; manually curated; KEGG: cce:Ccel_0525 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 1485539 12420976 Clo1313_1253 Clostridium thermocellum DSM 1313 dihydrodipicolinate reductase YP_005687767.1 1484781 R 637887 CDS YP_005687768.1 385778603 12420977 complement(1485599..1486477) 1 NC_017304.1 TIGRFAM: dihydrodipicolinate synthase; KEGG: cce:Ccel_0526 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1486477 12420977 Clo1313_1254 Clostridium thermocellum DSM 1313 dihydrodipicolinate synthase YP_005687768.1 1485599 R 637887 CDS YP_005687769.1 385778604 12420978 complement(1486597..1487595) 1 NC_017304.1 PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; manually curated; KEGG: csc:Csac_1584 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1487595 12420978 Clo1313_1255 Clostridium thermocellum DSM 1313 aspartate-semialdehyde dehydrogenase YP_005687769.1 1486597 R 637887 CDS YP_005687770.1 385778605 12420979 1488333..1490045 1 NC_017304.1 KEGG: cce:Ccel_0527 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D; SpoIID/LytB domain-containing protein 1490045 12420979 Clo1313_1256 Clostridium thermocellum DSM 1313 SpoIID/LytB domain-containing protein YP_005687770.1 1488333 D 637887 CDS YP_005687771.1 385778606 12420980 1490269..1491294 1 NC_017304.1 KEGG: cce:Ccel_0529 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 1491294 12420980 Clo1313_1257 Clostridium thermocellum DSM 1313 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_005687771.1 1490269 D 637887 CDS YP_005687772.1 385778607 12420981 1491358..1492482 1 NC_017304.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: cce:Ccel_0530 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1492482 12420981 Clo1313_1258 Clostridium thermocellum DSM 1313 queuine tRNA-ribosyltransferase YP_005687772.1 1491358 D 637887 CDS YP_005687773.1 385778608 12420982 1492585..1492884 1 NC_017304.1 KEGG: clo:HMPREF0868_0865 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 1492884 12420982 Clo1313_1259 Clostridium thermocellum DSM 1313 preprotein translocase subunit YajC YP_005687773.1 1492585 D 637887 CDS YP_005687774.1 385778609 12420983 complement(1492930..1493403) 1 NC_017304.1 KEGG: tjr:TherJR_0882 carbohydrate-binding family 25 protein; hypothetical protein 1493403 12420983 Clo1313_1260 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687774.1 1492930 R 637887 CDS YP_005687775.1 385778610 12420984 1493694..1494104 1 NC_017304.1 KEGG: cce:Ccel_0532 hypothetical protein; hypothetical protein 1494104 12420984 Clo1313_1261 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687775.1 1493694 D 637887 CDS YP_005687776.1 385778611 12420985 1494403..1494957 1 NC_017304.1 PFAM: phosphoribosyltransferase; KEGG: cce:Ccel_0611 phosphoribosyltransferase; phosphoribosyltransferase 1494957 12420985 Clo1313_1262 Clostridium thermocellum DSM 1313 phosphoribosyltransferase YP_005687776.1 1494403 D 637887 CDS YP_005687777.1 385778612 12420986 1495003..1495146 1 NC_017304.1 KEGG: hmg:100198067 similar to Helicase conserved C-terminal domain containing protein; helicase domain-containing protein 1495146 12420986 Clo1313_1263 Clostridium thermocellum DSM 1313 helicase domain-containing protein YP_005687777.1 1495003 D 637887 CDS YP_005687778.1 385778613 12420987 1495237..1496175 1 NC_017304.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: cce:Ccel_0612 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 1496175 12420987 Clo1313_1264 Clostridium thermocellum DSM 1313 aspartate carbamoyltransferase YP_005687778.1 1495237 D 637887 CDS YP_005687779.1 385778614 12420988 1496159..1497445 1 NC_017304.1 TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: cce:Ccel_0613 dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase 1497445 12420988 Clo1313_1265 Clostridium thermocellum DSM 1313 dihydroorotase YP_005687779.1 1496159 D 637887 CDS YP_005687780.1 385778615 12420989 1497577..1498521 1 NC_017304.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: cce:Ccel_0614 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1498521 12420989 Clo1313_1266 Clostridium thermocellum DSM 1313 orotidine 5'-phosphate decarboxylase YP_005687780.1 1497577 D 637887 CDS YP_005687781.1 385778616 12420990 1498551..1499624 1 NC_017304.1 KEGG: cce:Ccel_0615 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; carbamoyl-phosphate synthase small subunit 1499624 12420990 Clo1313_1267 Clostridium thermocellum DSM 1313 carbamoyl-phosphate synthase small subunit YP_005687781.1 1498551 D 637887 CDS YP_005687782.1 385778617 12420991 1499715..1502933 1 NC_017304.1 manually curated; TIGRFAM: carbamoyl-phosphate synthase, large subunit; KEGG: cce:Ccel_0616 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 1502933 12420991 Clo1313_1268 Clostridium thermocellum DSM 1313 carbamoyl-phosphate synthase large subunit YP_005687782.1 1499715 D 637887 CDS YP_005687783.1 385778618 12420992 1502959..1503744 1 NC_017304.1 PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cce:Ccel_0617 oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain 1503744 12420992 Clo1313_1269 Clostridium thermocellum DSM 1313 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain YP_005687783.1 1502959 D 637887 CDS YP_005687784.1 385778619 12420993 1503737..1504660 1 NC_017304.1 KEGG: cce:Ccel_0618 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase family protein 1504660 12420993 Clo1313_1270 Clostridium thermocellum DSM 1313 dihydroorotate dehydrogenase family protein YP_005687784.1 1503737 D 637887 CDS YP_005687785.1 385778620 12420994 1504749..1505450 1 NC_017304.1 PFAM: Phosphoglycerate mutase; KEGG: cce:Ccel_0619 phosphoglycerate mutase; phosphoglycerate mutase 1505450 12420994 Clo1313_1271 Clostridium thermocellum DSM 1313 phosphoglycerate mutase YP_005687785.1 1504749 D 637887 CDS YP_005687786.1 385778621 12420995 1505526..1506518 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: bha:BH2382 hypothetical protein; metallophosphoesterase 1506518 12420995 Clo1313_1272 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005687786.1 1505526 D 637887 CDS YP_005687787.1 385778622 12420996 1506515..1507966 1 NC_017304.1 PFAM: Rad50 zinc hook domain protein; KEGG: dae:Dtox_1391 SMC domain protein; Rad50 zinc hook domain-containing protein 1507966 12420996 Clo1313_1273 Clostridium thermocellum DSM 1313 Rad50 zinc hook domain-containing protein YP_005687787.1 1506515 D 637887 CDS YP_005687788.1 385778623 12420997 1507966..1508217 1 NC_017304.1 manually curated; KEGG: fma:FMG_0754 hypothetical protein; hypothetical protein 1508217 12420997 Clo1313_1274 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687788.1 1507966 D 637887 CDS YP_005687789.1 385778624 12420998 1508363..1509724 1 NC_017304.1 SMART: Elongator protein 3/MiaB/NifB; manually curated; KEGG: cce:Ccel_0678 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; MiaB-like tRNA modifying enzyme YliG 1509724 12420998 Clo1313_1275 Clostridium thermocellum DSM 1313 MiaB-like tRNA modifying enzyme YliG YP_005687789.1 1508363 D 637887 CDS YP_005687790.1 385778625 12420999 1509708..1510325 1 NC_017304.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: cce:Ccel_0679 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1510325 12420999 Clo1313_1276 Clostridium thermocellum DSM 1313 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_005687790.1 1509708 D 637887 CDS YP_005687791.1 385778626 12421000 1510652..1511092 1 NC_017304.1 KEGG: bcg:BCG9842_B5644 putative cell wall endopeptidase, NlpC/P60 family; hypothetical protein 1511092 12421000 Clo1313_1277 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687791.1 1510652 D 637887 CDS YP_005687792.1 385778627 12421001 1511183..1511683 1 NC_017304.1 KEGG: mac:MA3842 cell surface protein; hypothetical protein 1511683 12421001 Clo1313_1278 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687792.1 1511183 D 637887 CDS YP_005687793.1 385778628 12421002 1512322..1512870 1 NC_017304.1 PFAM: regulatory protein DeoR; KEGG: cce:Ccel_0680 fatty acid biosynthesis transcriptional regulator; regulatory protein DeoR 1512870 12421002 Clo1313_1279 Clostridium thermocellum DSM 1313 regulatory protein DeoR YP_005687793.1 1512322 D 637887 CDS YP_005687794.1 385778629 12421003 1512932..1513951 1 NC_017304.1 KEGG: cce:Ccel_0681 fatty acid/phospholipid synthesis protein PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX 1513951 12421003 Clo1313_1280 Clostridium thermocellum DSM 1313 fatty acid/phospholipid synthesis protein PlsX YP_005687794.1 1512932 D 637887 CDS YP_005687795.1 385778630 12421004 1513935..1514930 1 NC_017304.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: cce:Ccel_0682 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1514930 12421004 Clo1313_1281 Clostridium thermocellum DSM 1313 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005687795.1 1513935 D 637887 CDS YP_005687796.1 385778631 12421005 1514984..1515919 1 NC_017304.1 KEGG: cce:Ccel_0683 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase 1515919 12421005 Clo1313_1282 Clostridium thermocellum DSM 1313 malonyl CoA-acyl carrier protein transacylase YP_005687796.1 1514984 D 637887 CDS YP_005687797.1 385778632 12421006 1515961..1516704 1 NC_017304.1 KEGG: cce:Ccel_0684 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase 1516704 12421006 Clo1313_1283 Clostridium thermocellum DSM 1313 3-oxoacyl-(acyl-carrier-protein) reductase YP_005687797.1 1515961 D 637887 CDS YP_005687798.1 385778633 12421007 1516792..1517016 1 NC_017304.1 KEGG: tmt:Tmath_1329 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; acyl carrier protein 1517016 12421007 Clo1313_1284 Clostridium thermocellum DSM 1313 acyl carrier protein YP_005687798.1 1516792 D 637887 CDS YP_005687799.1 385778634 12421008 1517166..1518401 1 NC_017304.1 KEGG: cce:Ccel_0686 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 1518401 12421008 Clo1313_1285 Clostridium thermocellum DSM 1313 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_005687799.1 1517166 D 637887 CDS YP_005687800.1 385778635 12421009 1518553..1519263 1 NC_017304.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: aoe:Clos_1458 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 1519263 12421009 Clo1313_1286 Clostridium thermocellum DSM 1313 ribonuclease III YP_005687800.1 1518553 D 637887 CDS YP_005687801.1 385778636 12421010 1519484..1520500 1 NC_017304.1 KEGG: cce:Ccel_0688 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1520500 12421010 Clo1313_1287 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687801.1 1519484 D 637887 CDS YP_005687802.1 385778637 12421011 1520659..1520919 1 NC_017304.1 PFAM: Stage V sporulation protein S; KEGG: cno:NT01CX_2217 stage V sporulation protein S; Stage V sporulation protein S 1520919 12421011 Clo1313_1288 Clostridium thermocellum DSM 1313 Stage V sporulation protein S YP_005687802.1 1520659 D 637887 CDS YP_005687803.1 385778638 12421012 1521095..1522117 1 NC_017304.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: cno:NT01CX_0635 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1522117 12421012 Clo1313_1289 Clostridium thermocellum DSM 1313 4-hydroxythreonine-4-phosphate dehydrogenase YP_005687803.1 1521095 D 637887 CDS YP_005687804.1 385778639 12421013 1522246..1525818 1 NC_017304.1 KEGG: cce:Ccel_0696 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein; chromosome segregation protein SMC 1525818 12421013 Clo1313_1290 Clostridium thermocellum DSM 1313 chromosome segregation protein SMC YP_005687804.1 1522246 D 637887 CDS YP_005687805.1 385778640 12421014 1525855..1526763 1 NC_017304.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: cce:Ccel_0697 signal recognition particle-docking protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1526763 12421014 Clo1313_1291 Clostridium thermocellum DSM 1313 signal recognition particle-docking protein FtsY YP_005687805.1 1525855 D 637887 CDS YP_005687806.1 385778641 12421015 1526799..1527446 1 NC_017304.1 PFAM: protein of unknown function DUF218; KEGG: sli:Slin_3912 protein of unknown function DUF218; hypothetical protein 1527446 12421015 Clo1313_1292 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687806.1 1526799 D 637887 CDS YP_005687807.1 385778642 12421016 1527641..1528354 1 NC_017304.1 KEGG: cbl:CLK_0653 hypothetical protein; hypothetical protein 1528354 12421016 Clo1313_1293 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687807.1 1527641 D 637887 CDS YP_005687808.1 385778643 12421017 1528490..1529263 1 NC_017304.1 KEGG: cbf:CLI_1292 hypothetical protein; hypothetical protein 1529263 12421017 Clo1313_1294 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687808.1 1528490 D 637887 CDS YP_005687809.1 385778644 12421018 1529474..1530463 1 NC_017304.1 KEGG: dhd:Dhaf_0187 diaminopimelate dehydrogenase; TIGRFAM: diaminopimelate dehydrogenase; diaminopimelate dehydrogenase 1530463 12421018 Clo1313_1295 Clostridium thermocellum DSM 1313 diaminopimelate dehydrogenase YP_005687809.1 1529474 D 637887 CDS YP_005687810.1 385778645 12421019 complement(1530607..1530780) 1 NC_017304.1 KEGG: dae:Dtox_3521 hypothetical protein; hypothetical protein 1530780 12421019 Clo1313_1296 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687810.1 1530607 R 637887 CDS YP_005687811.1 385778646 12421020 1531910..1532929 1 NC_017304.1 KEGG: cbe:Cbei_1606 fibronectin, type III domain-containing protein; fibronectin type III domain-containing protein 1532929 12421020 Clo1313_1297 Clostridium thermocellum DSM 1313 fibronectin type III domain-containing protein YP_005687811.1 1531910 D 637887 CDS YP_005687812.1 385778647 12421021 complement(join(1533161..1534036,1534035..1534313)) 1 NC_017304.1 KEGG: cce:Ccel_1666 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1534313 12421021 Clo1313_1298 Clostridium thermocellum DSM 1313 transposase IS3/IS911 family protein YP_005687812.1 1533161 R 637887 CDS YP_005687813.1 385778648 12421022 1534503..1535576 1 NC_017304.1 KEGG: cbe:Cbei_1606 fibronectin, type III domain-containing protein; fibronectin type III domain-containing protein 1535576 12421022 Clo1313_1299 Clostridium thermocellum DSM 1313 fibronectin type III domain-containing protein YP_005687813.1 1534503 D 637887 CDS YP_005687814.1 385778649 12421023 1535613..1541648 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: cbe:Cbei_1606 fibronectin, type III domain-containing protein; Dockerin type 1 1541648 12421023 Clo1313_1300 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005687814.1 1535613 D 637887 CDS YP_005687815.1 385778650 12421024 1542072..1543814 1 NC_017304.1 TIGRFAM: glutaminyl-tRNA synthetase; KEGG: pth:PTH_2867 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase 1543814 12421024 Clo1313_1301 Clostridium thermocellum DSM 1313 glutaminyl-tRNA synthetase YP_005687815.1 1542072 D 637887 CDS YP_005687816.1 385778651 12421025 complement(1543937..1544821) 1 NC_017304.1 KEGG: gym:GYMC10_5077 hypothetical protein; hypothetical protein 1544821 12421025 Clo1313_1302 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687816.1 1543937 R 637887 CDS YP_005687817.1 385778652 12421026 complement(1544913..1546115) 1 NC_017304.1 KEGG: fps:FP1116 hypothetical protein; hypothetical protein 1546115 12421026 Clo1313_1303 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687817.1 1544913 R 637887 CDS YP_005687818.1 385778653 12421027 complement(1546093..1548627) 1 NC_017304.1 KEGG: lba:Lebu_1821 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2339, transmembrane; hypothetical protein 1548627 12421027 Clo1313_1304 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687818.1 1546093 R 637887 CDS YP_005687819.1 385778654 12421028 1549153..1552386 1 NC_017304.1 manually curated; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Dockerin type 1; esterase; KEGG: cpy:Cphy_0624 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10; glycoside hydrolase 1552386 12421028 Clo1313_1305 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687819.1 1549153 D 637887 CDS YP_005687820.1 385778655 12421029 1552694..1553533 1 NC_017304.1 PFAM: protein of unknown function DUF152; KEGG: cce:Ccel_0607 protein of unknown function DUF152; hypothetical protein 1553533 12421029 Clo1313_1306 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687820.1 1552694 D 637887 CDS YP_005687821.1 385778656 12421030 1553530..1553631 1 NC_017304.1 hypothetical protein 1553631 12421030 Clo1313_1307 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687821.1 1553530 D 637887 CDS YP_005687822.1 385778657 12421031 1553628..1555316 1 NC_017304.1 PFAM: extracellular solute-binding protein family 5; KEGG: cce:Ccel_0608 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 1555316 12421031 Clo1313_1308 Clostridium thermocellum DSM 1313 family 5 extracellular solute-binding protein YP_005687822.1 1553628 D 637887 CDS YP_005687823.1 385778658 12421032 1555397..1555852 1 NC_017304.1 KEGG: cce:Ccel_0609 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase 1555852 12421032 Clo1313_1309 Clostridium thermocellum DSM 1313 lipoprotein signal peptidase YP_005687823.1 1555397 D 637887 CDS YP_005687824.1 385778659 12421033 1555978..1556889 1 NC_017304.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: cce:Ccel_0610 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 1556889 12421033 Clo1313_1310 Clostridium thermocellum DSM 1313 RluA family pseudouridine synthase YP_005687824.1 1555978 D 637887 CDS YP_005687825.1 385778660 12421034 1556987..1557127 1 NC_017304.1 manually curated; KEGG: cce:Ccel_0533 hypothetical protein; hypothetical protein 1557127 12421034 Clo1313_1311 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687825.1 1556987 D 637887 CDS YP_005687826.1 385778661 12421035 1557278..1558630 1 NC_017304.1 PFAM: Radical SAM domain protein; KEGG: cce:Ccel_0534 radical SAM domain protein; radical SAM protein 1558630 12421035 Clo1313_1312 Clostridium thermocellum DSM 1313 radical SAM protein YP_005687826.1 1557278 D 637887 CDS YP_005687827.1 385778662 12421036 1558661..1559326 1 NC_017304.1 KEGG: ctc:CTC00912 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal dependent phosphohydrolase 1559326 12421036 Clo1313_1313 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005687827.1 1558661 D 637887 CDS YP_005687828.1 385778663 12421037 1559489..1560826 1 NC_017304.1 KEGG: cce:Ccel_0536 protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 1560826 12421037 Clo1313_1314 Clostridium thermocellum DSM 1313 protein-export membrane protein SecD YP_005687828.1 1559489 D 637887 CDS YP_005687829.1 385778664 12421038 1560819..1561775 1 NC_017304.1 KEGG: cce:Ccel_0537 protein-export membrane protein SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 1561775 12421038 Clo1313_1315 Clostridium thermocellum DSM 1313 protein-export membrane protein SecF YP_005687829.1 1560819 D 637887 CDS YP_005687830.1 385778665 12421039 1562150..1563001 1 NC_017304.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: cno:NT01CX_1071 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1563001 12421039 Clo1313_1316 Clostridium thermocellum DSM 1313 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005687830.1 1562150 D 637887 CDS YP_005687831.1 385778666 12421040 1563062..1563907 1 NC_017304.1 KEGG: csc:Csac_2709 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 1563907 12421040 Clo1313_1317 Clostridium thermocellum DSM 1313 pantoate--beta-alanine ligase YP_005687831.1 1563062 D 637887 CDS YP_005687832.1 385778667 12421041 1563913..1564293 1 NC_017304.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: pth:PTH_0222 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 1564293 12421041 Clo1313_1318 Clostridium thermocellum DSM 1313 aspartate 1-decarboxylase YP_005687832.1 1563913 D 637887 CDS YP_005687833.1 385778668 12421042 complement(1564334..1564606) 1 NC_017304.1 KEGG: bbe:BBR47_12230 hypothetical protein; hypothetical protein 1564606 12421042 Clo1313_1319 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687833.1 1564334 R 637887 CDS YP_005687834.1 385778669 12421043 1564983..1566020 1 NC_017304.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: hor:Hore_22020 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1566020 12421043 Clo1313_1320 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005687834.1 1564983 D 637887 CDS YP_005687835.1 385778670 12421044 1566167..1567162 1 NC_017304.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: csc:Csac_0881 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 1567162 12421044 Clo1313_1321 Clostridium thermocellum DSM 1313 deoxyguanosinetriphosphate triphosphohydrolase YP_005687835.1 1566167 D 637887 CDS YP_005687836.1 385778671 12421045 1567427..1567528 1 NC_017304.1 hypothetical protein 1567528 12421045 Clo1313_1322 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687836.1 1567427 D 637887 CDS YP_005687837.1 385778672 12421046 1567521..1569323 1 NC_017304.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; KEGG: cce:Ccel_0540 DNA primase; SMART: Toprim sub domain-containing protein; DNA primase 1569323 12421046 Clo1313_1323 Clostridium thermocellum DSM 1313 DNA primase YP_005687837.1 1567521 D 637887 CDS YP_005687838.1 385778673 12421047 1569373..1570449 1 NC_017304.1 KEGG: cce:Ccel_0541 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; RpoD subfamily RNA polymerase sigma-70 subunit 1570449 12421047 Clo1313_1324 Clostridium thermocellum DSM 1313 RpoD subfamily RNA polymerase sigma-70 subunit YP_005687838.1 1569373 D 637887 CDS YP_005687839.1 385778674 12421048 1570736..1570954 1 NC_017304.1 KEGG: cce:Ccel_2869 hypothetical protein; hypothetical protein 1570954 12421048 Clo1313_1325 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687839.1 1570736 D 637887 CDS YP_005687840.1 385778675 12421051 complement(1571302..1571472) 1 NC_017304.1 KEGG: pvx:PVX_116590 hypothetical protein; hypothetical protein 1571472 12421051 Clo1313_1326 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687840.1 1571302 R 637887 CDS YP_005687841.1 385778676 12421052 1571589..1572293 1 NC_017304.1 PFAM: protein of unknown function DUF633; KEGG: cce:Ccel_0543 protein of unknown function DUF633; hypothetical protein 1572293 12421052 Clo1313_1327 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687841.1 1571589 D 637887 CDS YP_005687842.1 385778677 12421053 1572307..1573413 1 NC_017304.1 PFAM: protein of unknown function DUF34; KEGG: tjr:TherJR_2297 protein of unknown function DUF34; hypothetical protein 1573413 12421053 Clo1313_1328 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687842.1 1572307 D 637887 CDS YP_005687843.1 385778678 12421055 complement(1573919..1574362) 1 NC_017304.1 KEGG: cyn:Cyan7425_0749 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1574362 12421055 Clo1313_1329 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005687843.1 1573919 R 637887 CDS YP_005687844.1 385778679 12421056 1574537..1575199 1 NC_017304.1 KEGG: sth:STH845 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 1575199 12421056 Clo1313_1330 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005687844.1 1574537 D 637887 CDS YP_005687845.1 385778680 12421057 1575220..1576209 1 NC_017304.1 KEGG: tmt:Tmath_0849 putative transmembrane anti-sigma factor; hypothetical protein 1576209 12421057 Clo1313_1331 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687845.1 1575220 D 637887 CDS YP_005687846.1 385778681 12421058 1576342..1577040 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: cac:CA_C1485 cell wall biosynthesis glycosyltransferase; type IV pilus assembly PilZ 1577040 12421058 Clo1313_1332 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005687846.1 1576342 D 637887 CDS YP_005687847.1 385778682 12421059 1577265..1577477 1 NC_017304.1 KEGG: hmg:100214601 similar to claspin; hypothetical protein 1577477 12421059 Clo1313_1333 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687847.1 1577265 D 637887 CDS YP_005687848.1 385778683 12421060 1577578..1580262 1 NC_017304.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: cce:Ccel_2075 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; DNA polymerase I 1580262 12421060 Clo1313_1334 Clostridium thermocellum DSM 1313 DNA polymerase I YP_005687848.1 1577578 D 637887 CDS YP_005687849.1 385778684 12421061 1580338..1580925 1 NC_017304.1 TIGRFAM: dephospho-CoA kinase; KEGG: cce:Ccel_2074 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 1580925 12421061 Clo1313_1335 Clostridium thermocellum DSM 1313 dephospho-CoA kinase YP_005687849.1 1580338 D 637887 CDS YP_005687850.1 385778685 12421062 1580963..1581529 1 NC_017304.1 PFAM: Lytic transglycosylase catalytic; KEGG: cbf:CLI_3066 transglycosylase SLT domain-containing protein; lytic transglycosylase 1581529 12421062 Clo1313_1336 Clostridium thermocellum DSM 1313 lytic transglycosylase YP_005687850.1 1580963 D 637887 CDS YP_005687851.1 385778686 12421063 complement(1581643..1582062) 1 NC_017304.1 KEGG: cce:Ccel_0091 regulatory protein, MerR; regulatory protein MerR 1582062 12421063 Clo1313_1337 Clostridium thermocellum DSM 1313 regulatory protein MerR YP_005687851.1 1581643 R 637887 CDS YP_005687852.1 385778687 12421064 1582313..1583203 1 NC_017304.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: csc:Csac_0785 hypothetical protein; hypothetical protein 1583203 12421064 Clo1313_1338 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687852.1 1582313 D 637887 CDS YP_005687853.1 385778688 12421065 1583301..1584431 1 NC_017304.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gme:Gmet_1298 diguanylate cyclase with GAF sensor; SMART: GGDEF domain containing protein; diguanylate cyclase 1584431 12421065 Clo1313_1339 Clostridium thermocellum DSM 1313 diguanylate cyclase YP_005687853.1 1583301 D 637887 CDS YP_005687854.1 385778689 12421066 complement(1584613..1585629) 1 NC_017304.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cce:Ccel_2071 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1585629 12421066 Clo1313_1340 Clostridium thermocellum DSM 1313 phospho-2-dehydro-3-deoxyheptonate aldolase YP_005687854.1 1584613 R 637887 CDS YP_005687855.1 385778690 12421067 1586624..1587202 1 NC_017304.1 KEGG: cce:Ccel_0588 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 1587202 12421067 Clo1313_1341 Clostridium thermocellum DSM 1313 CheW protein YP_005687855.1 1586624 D 637887 CDS YP_005687856.1 385778691 12421068 complement(1587330..1588424) 1 NC_017304.1 KEGG: cce:Ccel_0590 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF 1588424 12421068 Clo1313_1342 Clostridium thermocellum DSM 1313 GTP-binding protein YchF YP_005687856.1 1587330 R 637887 CDS YP_005687857.1 385778692 12421069 complement(1588573..1589865) 1 NC_017304.1 KEGG: nmu:Nmul_A0278 glycosyl transferase family protein; glycosyl transferase family protein 1589865 12421069 Clo1313_1343 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005687857.1 1588573 R 637887 CDS YP_005687858.1 385778693 12421070 1590359..1591843 1 NC_017304.1 TIGRFAM: anthranilate synthase component I; KEGG: pjd:Pjdr2_2417 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; anthranilate synthase component I 1591843 12421070 Clo1313_1344 Clostridium thermocellum DSM 1313 anthranilate synthase component I YP_005687858.1 1590359 D 637887 CDS YP_005687859.1 385778694 12421071 1591840..1592430 1 NC_017304.1 KEGG: afn:Acfer_0282 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 1592430 12421071 Clo1313_1345 Clostridium thermocellum DSM 1313 glutamine amidotransferase of anthranilate synthase YP_005687859.1 1591840 D 637887 CDS YP_005687860.1 385778695 12421072 1592505..1593542 1 NC_017304.1 KEGG: amt:Amet_1079 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 1593542 12421072 Clo1313_1346 Clostridium thermocellum DSM 1313 anthranilate phosphoribosyltransferase YP_005687860.1 1592505 D 637887 CDS YP_005687861.1 385778696 12421073 1593608..1594390 1 NC_017304.1 KEGG: clj:CLJU_c16100 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 1594390 12421073 Clo1313_1347 Clostridium thermocellum DSM 1313 Indole-3-glycerol phosphate synthase YP_005687861.1 1593608 D 637887 CDS YP_005687862.1 385778697 12421074 1594394..1595050 1 NC_017304.1 KEGG: tmt:Tmath_1419 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 1595050 12421074 Clo1313_1348 Clostridium thermocellum DSM 1313 phosphoribosylanthranilate isomerase YP_005687862.1 1594394 D 637887 CDS YP_005687863.1 385778698 12421075 1595145..1595732 1 NC_017304.1 PFAM: NADPH-dependent FMN reductase; KEGG: cce:Ccel_0549 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1595732 12421075 Clo1313_1349 Clostridium thermocellum DSM 1313 NADPH-dependent FMN reductase YP_005687863.1 1595145 D 637887 CDS YP_005687864.1 385778699 12421076 1595707..1595877 1 NC_017304.1 hypothetical protein 1595877 12421076 Clo1313_1350 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687864.1 1595707 D 637887 CDS YP_005687865.1 385778700 12421077 1595994..1596662 1 NC_017304.1 KEGG: cce:Ccel_0551 hypothetical protein; hypothetical protein 1596662 12421077 Clo1313_1351 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687865.1 1595994 D 637887 CDS YP_005687866.1 385778701 12421078 1596676..1597386 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: pcb:PC000378.02.0 hypothetical protein; type IV pilus assembly PilZ 1597386 12421078 Clo1313_1352 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005687866.1 1596676 D 637887 CDS YP_005687867.1 385778702 12421079 1597399..1597605 1 NC_017304.1 KEGG: cce:Ccel_0553 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1597605 12421079 Clo1313_1353 Clostridium thermocellum DSM 1313 4Fe-4S ferredoxin YP_005687867.1 1597399 D 637887 CDS YP_005687868.1 385778703 12421080 1597656..1598714 1 NC_017304.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cce:Ccel_0554 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1598714 12421080 Clo1313_1354 Clostridium thermocellum DSM 1313 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_005687868.1 1597656 D 637887 CDS YP_005687869.1 385778704 12421081 1598765..1599511 1 NC_017304.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: cce:Ccel_0555 thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate TPP-binding domain-containing protein 1599511 12421081 Clo1313_1355 Clostridium thermocellum DSM 1313 thiamine pyrophosphate TPP-binding domain-containing protein YP_005687869.1 1598765 D 637887 CDS YP_005687870.1 385778705 12421082 1599512..1600057 1 NC_017304.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: cce:Ccel_0556 pyruvate ferredoxin/flavodoxin oxidoreductase; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain 1600057 12421082 Clo1313_1356 Clostridium thermocellum DSM 1313 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain YP_005687870.1 1599512 D 637887 CDS YP_005687871.1 385778706 12421083 complement(1600250..1602367) 1 NC_017304.1 PFAM: glutamine synthetase catalytic region; KEGG: tpd:Teth39_1666 glutamine synthetase, catalytic region; glutamine synthetase 1602367 12421083 Clo1313_1357 Clostridium thermocellum DSM 1313 glutamine synthetase YP_005687871.1 1600250 R 637887 CDS YP_005687872.1 385778707 12421084 complement(1602599..1602919) 1 NC_017304.1 KEGG: cce:Ccel_0563 hypothetical protein; hypothetical protein 1602919 12421084 Clo1313_1358 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687872.1 1602599 R 637887 CDS YP_005687873.1 385778708 12421085 complement(1603094..1604230) 1 NC_017304.1 KEGG: cpf:CPF_2378 cell envelope-related function transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 1604230 12421085 Clo1313_1359 Clostridium thermocellum DSM 1313 cell envelope-related transcriptional attenuator YP_005687873.1 1603094 R 637887 CDS YP_005687874.1 385778709 12421086 1604513..1605232 1 NC_017304.1 PFAM: Rubrerythrin; KEGG: ctc:CTC02638 rubrerythrin; rubrerythrin 1605232 12421086 Clo1313_1360 Clostridium thermocellum DSM 1313 rubrerythrin YP_005687874.1 1604513 D 637887 CDS YP_005687875.1 385778710 12421087 complement(1605249..1605794) 1 NC_017304.1 KEGG: dhd:Dhaf_2898 hypothetical protein; hypothetical protein 1605794 12421087 Clo1313_1361 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687875.1 1605249 R 637887 CDS YP_005687876.1 385778711 12421088 complement(1605849..1606838) 1 NC_017304.1 PFAM: band 7 protein; KEGG: tjr:TherJR_2427 hypothetical protein; hypothetical protein 1606838 12421088 Clo1313_1362 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687876.1 1605849 R 637887 CDS YP_005687877.1 385778712 12421089 complement(1606941..1607432) 1 NC_017304.1 PFAM: protein of unknown function DUF107; KEGG: cbe:Cbei_1483 hypothetical protein; hypothetical protein 1607432 12421089 Clo1313_1363 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687877.1 1606941 R 637887 CDS YP_005687878.1 385778713 12421090 complement(1607722..1608792) 1 NC_017304.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: cce:Ccel_1877 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase 1608792 12421090 Clo1313_1364 Clostridium thermocellum DSM 1313 branched-chain amino acid aminotransferase YP_005687878.1 1607722 R 637887 CDS YP_005687879.1 385778714 12421091 1609093..1609596 1 NC_017304.1 KEGG: cce:Ccel_0662 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD superfamily phosphatase 1609596 12421091 Clo1313_1365 Clostridium thermocellum DSM 1313 HAD superfamily phosphatase YP_005687879.1 1609093 D 637887 CDS YP_005687880.1 385778715 12421092 1609641..1610537 1 NC_017304.1 KEGG: cce:Ccel_0663 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase 1610537 12421092 Clo1313_1366 Clostridium thermocellum DSM 1313 shikimate 5-dehydrogenase YP_005687880.1 1609641 D 637887 CDS YP_005687881.1 385778716 12421093 1610633..1612318 1 NC_017304.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: cce:Ccel_2414 type II secretion system protein E; type II secretion system protein E 1612318 12421093 Clo1313_1367 Clostridium thermocellum DSM 1313 type II secretion system protein E YP_005687881.1 1610633 D 637887 CDS YP_005687882.1 385778717 12421094 1612404..1613249 1 NC_017304.1 KEGG: cce:Ccel_2410 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; prepilin peptidase 1613249 12421094 Clo1313_1368 Clostridium thermocellum DSM 1313 prepilin peptidase YP_005687882.1 1612404 D 637887 CDS YP_005687883.1 385778718 12421095 1613430..1613696 1 NC_017304.1 PFAM: Late competence development protein ComFB; KEGG: cce:Ccel_0664 hypothetical protein; late competence development protein ComFB 1613696 12421095 Clo1313_1369 Clostridium thermocellum DSM 1313 late competence development protein ComFB YP_005687883.1 1613430 D 637887 CDS YP_005687884.1 385778719 12421096 1613809..1614699 1 NC_017304.1 KEGG: cce:Ccel_1925 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2; xylose isomerase domain-containing protein 1614699 12421096 Clo1313_1370 Clostridium thermocellum DSM 1313 xylose isomerase domain-containing protein YP_005687884.1 1613809 D 637887 CDS YP_005687885.1 385778720 12421097 1614677..1615105 1 NC_017304.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: cce:Ccel_1924 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 1615105 12421097 Clo1313_1371 Clostridium thermocellum DSM 1313 3-dehydroquinate dehydratase YP_005687885.1 1614677 D 637887 CDS YP_005687886.1 385778721 12421098 1615188..1616267 1 NC_017304.1 PFAM: peptidase M24; creatinase; KEGG: cce:Ccel_1923 peptidase M24; peptidase M24 1616267 12421098 Clo1313_1372 Clostridium thermocellum DSM 1313 peptidase M24 YP_005687886.1 1615188 D 637887 CDS YP_005687887.1 385778722 12421099 1616483..1617040 1 NC_017304.1 KEGG: cce:Ccel_1922 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; translation elongation factor P 1617040 12421099 Clo1313_1373 Clostridium thermocellum DSM 1313 translation elongation factor P YP_005687887.1 1616483 D 637887 CDS YP_005687888.1 385778723 12421100 1617172..1617582 1 NC_017304.1 KEGG: cce:Ccel_1921 hypothetical protein; hypothetical protein 1617582 12421100 Clo1313_1374 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687888.1 1617172 D 637887 CDS YP_005687889.1 385778724 12421101 1617784..1618260 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 1618260 12421101 Clo1313_1375 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005687889.1 1617784 D 637887 CDS YP_005687890.1 385778725 12421102 1618533..1619543 1 NC_017304.1 KEGG: cce:Ccel_1916 stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; stage III sporulation protein AA 1619543 12421102 Clo1313_1376 Clostridium thermocellum DSM 1313 stage III sporulation protein AA YP_005687890.1 1618533 D 637887 CDS YP_005687891.1 385778726 12421103 1619546..1620067 1 NC_017304.1 KEGG: cce:Ccel_1915 stage III sporulation protein AB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB; stage III sporulation protein AB 1620067 12421103 Clo1313_1377 Clostridium thermocellum DSM 1313 stage III sporulation protein AB YP_005687891.1 1619546 D 637887 CDS YP_005687892.1 385778727 12421104 1620170..1620364 1 NC_017304.1 TIGRFAM: stage III sporulation protein AC; KEGG: cce:Ccel_1914 stage III sporulation protein AC; stage III sporulation protein AC 1620364 12421104 Clo1313_1378 Clostridium thermocellum DSM 1313 stage III sporulation protein AC YP_005687892.1 1620170 D 637887 CDS YP_005687893.1 385778728 12421105 1620390..1620779 1 NC_017304.1 TIGRFAM: stage III sporulation protein AD; KEGG: amt:Amet_2495 sporulation stage III, protein AD; stage III sporulation protein AD 1620779 12421105 Clo1313_1379 Clostridium thermocellum DSM 1313 stage III sporulation protein AD YP_005687893.1 1620390 D 637887 CDS YP_005687894.1 385778729 12421106 1620844..1622073 1 NC_017304.1 KEGG: cce:Ccel_1912 stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; stage III sporulation protein AE 1622073 12421106 Clo1313_1380 Clostridium thermocellum DSM 1313 stage III sporulation protein AE YP_005687894.1 1620844 D 637887 CDS YP_005687895.1 385778730 12421107 1622096..1622728 1 NC_017304.1 KEGG: cce:Ccel_1911 hypothetical protein; TIGRFAM: stage III sporulation protein AF; PFAM: Sporulation stage III protein AF; stage III sporulation protein AF 1622728 12421107 Clo1313_1381 Clostridium thermocellum DSM 1313 stage III sporulation protein AF YP_005687895.1 1622096 D 637887 CDS YP_005687896.1 385778731 12421108 1622739..1623362 1 NC_017304.1 KEGG: cce:Ccel_1910 stage III sporulation protein AG; stage III sporulation protein AG 1623362 12421108 Clo1313_1382 Clostridium thermocellum DSM 1313 stage III sporulation protein AG YP_005687896.1 1622739 D 637887 CDS YP_005687897.1 385778732 12421109 1623469..1624116 1 NC_017304.1 KEGG: cce:Ccel_1909 hypothetical protein; hypothetical protein 1624116 12421109 Clo1313_1383 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687897.1 1623469 D 637887 CDS YP_005687898.1 385778733 12421110 1624217..1624621 1 NC_017304.1 PFAM: protein of unknown function DUF322; KEGG: cce:Ccel_1908 protein of unknown function DUF322; hypothetical protein 1624621 12421110 Clo1313_1384 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687898.1 1624217 D 637887 CDS YP_005687899.1 385778734 12421111 1624825..1625373 1 NC_017304.1 KEGG: cce:Ccel_1907 hypothetical protein; hypothetical protein 1625373 12421111 Clo1313_1385 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687899.1 1624825 D 637887 CDS YP_005687900.1 385778735 12421112 1625387..1625620 1 NC_017304.1 PFAM: Protein of unknown function DUF2273; KEGG: cce:Ccel_1906 hypothetical protein; hypothetical protein 1625620 12421112 Clo1313_1386 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687900.1 1625387 D 637887 CDS YP_005687901.1 385778736 12421113 1625675..1626112 1 NC_017304.1 KEGG: cce:Ccel_1905 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 1626112 12421113 Clo1313_1387 Clostridium thermocellum DSM 1313 NusB antitermination factor YP_005687901.1 1625675 D 637887 CDS YP_005687902.1 385778737 12421114 1626159..1627394 1 NC_017304.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: cce:Ccel_1904 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 1627394 12421114 Clo1313_1388 Clostridium thermocellum DSM 1313 exodeoxyribonuclease VII large subunit YP_005687902.1 1626159 D 637887 CDS YP_005687903.1 385778738 12421115 1627428..1627670 1 NC_017304.1 KEGG: cce:Ccel_1903 exodeoxyribonuclease VII, small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 1627670 12421115 Clo1313_1389 Clostridium thermocellum DSM 1313 exodeoxyribonuclease VII small subunit YP_005687903.1 1627428 D 637887 CDS YP_005687904.1 385778739 12421116 1627651..1628547 1 NC_017304.1 PFAM: Polyprenyl synthetase; KEGG: cce:Ccel_1902 polyprenyl synthetase; polyprenyl synthetase 1628547 12421116 Clo1313_1390 Clostridium thermocellum DSM 1313 polyprenyl synthetase YP_005687904.1 1627651 D 637887 CDS YP_005687905.1 385778740 12421117 1628585..1629031 1 NC_017304.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: aoe:Clos_1608 acid phosphatase/vanadium-dependent haloperoxidase related; acid phosphatase/vanadium-dependent haloperoxidase-like protein 1629031 12421117 Clo1313_1391 Clostridium thermocellum DSM 1313 acid phosphatase/vanadium-dependent haloperoxidase-like protein YP_005687905.1 1628585 D 637887 CDS YP_005687906.1 385778741 12421118 1629924..1630652 1 NC_017304.1 KEGG: cce:Ccel_1901 hypothetical protein; hypothetical protein 1630652 12421118 Clo1313_1392 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687906.1 1629924 D 637887 CDS YP_005687907.1 385778742 12421119 1630683..1632566 1 NC_017304.1 KEGG: cce:Ccel_1900 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; deoxyxylulose-5-phosphate synthase 1632566 12421119 Clo1313_1393 Clostridium thermocellum DSM 1313 deoxyxylulose-5-phosphate synthase YP_005687907.1 1630683 D 637887 CDS YP_005687908.1 385778743 12421120 1632629..1633441 1 NC_017304.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: cce:Ccel_1899 hemolysin A; SMART: RNA-binding S4 domain protein; hemolysin A 1633441 12421120 Clo1313_1394 Clostridium thermocellum DSM 1313 hemolysin A YP_005687908.1 1632629 D 637887 CDS YP_005687909.1 385778744 12421121 1633494..1634279 1 NC_017304.1 KEGG: cpe:CPE2521 hypothetical protein; hypothetical protein 1634279 12421121 Clo1313_1395 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687909.1 1633494 D 637887 CDS YP_005687910.1 385778745 12421122 1634731..1636680 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0755 glycoside hydrolase family 9; glycoside hydrolase 1636680 12421122 Clo1313_1396 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687910.1 1634731 D 637887 CDS YP_005687911.1 385778746 12421123 complement(1636806..1638581) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0805 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 1638581 12421123 Clo1313_1397 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687911.1 1636806 R 637887 CDS YP_005687912.1 385778747 12421124 1639122..1640798 1 NC_017304.1 PFAM: coagulation factor 5/8 type domain protein; Dockerin type 1; KEGG: cce:Ccel_0379 protein of unknown function DUF291; coagulation factor 5/8 type domain-containing protein 1640798 12421124 Clo1313_1398 Clostridium thermocellum DSM 1313 coagulation factor 5/8 type domain-containing protein YP_005687912.1 1639122 D 637887 CDS YP_005687913.1 385778748 12421125 1641265..1641663 1 NC_017304.1 KEGG: lsp:Bsph_3107 hypothetical protein; hypothetical protein 1641663 12421125 Clo1313_1399 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687913.1 1641265 D 637887 CDS YP_005687914.1 385778749 12421126 1641735..1643747 1 NC_017304.1 KEGG: cno:NT01CX_1186 hypothetical protein; hypothetical protein 1643747 12421126 Clo1313_1400 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687914.1 1641735 D 637887 CDS YP_005687915.1 385778750 12421127 1643788..1644651 1 NC_017304.1 KEGG: sti:Sthe_2079 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1644651 12421127 Clo1313_1401 Clostridium thermocellum DSM 1313 ABC transporter YP_005687915.1 1643788 D 637887 CDS YP_005687916.1 385778751 12421128 1644636..1645310 1 NC_017304.1 KEGG: fps:FP0106 hypothetical protein; hypothetical protein 1645310 12421128 Clo1313_1402 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687916.1 1644636 D 637887 CDS YP_005687917.1 385778752 12421130 complement(1645783..1651263) 1 NC_017304.1 SMART: GGDEF domain containing protein; Tetratricopeptide repeat; TIGRFAM: diguanylate cyclase; KEGG: aoe:Clos_1186 diguanylate cyclase; PFAM: GGDEF domain containing protein; Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; diguanylate cyclase with TPR repeats 1651263 12421130 Clo1313_1404 Clostridium thermocellum DSM 1313 diguanylate cyclase with TPR repeats YP_005687917.1 1645783 R 637887 CDS YP_005687918.1 385778753 12421131 1651616..1652485 1 NC_017304.1 PFAM: ATP-NAD/AcoX kinase; KEGG: cce:Ccel_1898 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 1652485 12421131 Clo1313_1405 Clostridium thermocellum DSM 1313 ATP-NAD/AcoX kinase YP_005687918.1 1651616 D 637887 CDS YP_005687919.1 385778754 12421132 1652487..1652948 1 NC_017304.1 KEGG: cce:Ccel_1897 arginine repressor, ArgR; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like; arginine repressor ArgR 1652948 12421132 Clo1313_1406 Clostridium thermocellum DSM 1313 arginine repressor ArgR YP_005687919.1 1652487 D 637887 CDS YP_005687920.1 385778755 12421133 1653004..1654716 1 NC_017304.1 KEGG: cce:Ccel_1896 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 1654716 12421133 Clo1313_1407 Clostridium thermocellum DSM 1313 DNA repair protein RecN YP_005687920.1 1653004 D 637887 CDS YP_005687921.1 385778756 12421134 1654958..1656298 1 NC_017304.1 TIGRFAM: stage IV sporulation protein B; KEGG: cce:Ccel_1895 stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; stage IV sporulation protein B 1656298 12421134 Clo1313_1408 Clostridium thermocellum DSM 1313 stage IV sporulation protein B YP_005687921.1 1654958 D 637887 CDS YP_005687922.1 385778757 12421135 1656662..1657471 1 NC_017304.1 TIGRFAM: sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; KEGG: cce:Ccel_1894 sporulation transcriptional activator Spo0A; SMART: response regulator receiver; sporulation transcriptional activator Spo0A 1657471 12421135 Clo1313_1409 Clostridium thermocellum DSM 1313 sporulation transcriptional activator Spo0A YP_005687922.1 1656662 D 637887 CDS YP_005687923.1 385778758 12421136 1657944..1658297 1 NC_017304.1 KEGG: cbe:Cbei_4020 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1658297 12421136 Clo1313_1410 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005687923.1 1657944 D 637887 CDS YP_005687924.1 385778759 12421137 1658339..1660486 1 NC_017304.1 KEGG: dae:Dtox_0611 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; CheA signal transduction histidine kinase 1660486 12421137 Clo1313_1411 Clostridium thermocellum DSM 1313 CheA signal transduction histidine kinase YP_005687924.1 1658339 D 637887 CDS YP_005687925.1 385778760 12421138 1660503..1660994 1 NC_017304.1 KEGG: dae:Dtox_0612 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 1660994 12421138 Clo1313_1412 Clostridium thermocellum DSM 1313 CheW protein YP_005687925.1 1660503 D 637887 CDS YP_005687926.1 385778761 12421139 1661020..1661838 1 NC_017304.1 PFAM: MCP methyltransferase CheR-type; KEGG: dae:Dtox_0614 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1661838 12421139 Clo1313_1413 Clostridium thermocellum DSM 1313 chemotaxis protein CheR YP_005687926.1 1661020 D 637887 CDS YP_005687927.1 385778762 12421140 1661855..1662889 1 NC_017304.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dae:Dtox_0615 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 1662889 12421140 Clo1313_1414 Clostridium thermocellum DSM 1313 response regulator receiver modulated CheB methylesterase YP_005687927.1 1661855 D 637887 CDS YP_005687928.1 385778763 12421141 1662905..1665613 1 NC_017304.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; KEGG: swo:Swol_1328 signal transduction histidine kinase-like protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 1665613 12421141 Clo1313_1415 Clostridium thermocellum DSM 1313 multi-sensor hybrid histidine kinase YP_005687928.1 1662905 D 637887 CDS YP_005687929.1 385778764 12421142 1665662..1666072 1 NC_017304.1 KEGG: swo:Swol_1327 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1666072 12421142 Clo1313_1416 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005687929.1 1665662 D 637887 CDS YP_005687930.1 385778765 12421143 complement(1666119..1666691) 1 NC_017304.1 KEGG: cce:Ccel_0592 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; regulatory protein MerR 1666691 12421143 Clo1313_1417 Clostridium thermocellum DSM 1313 regulatory protein MerR YP_005687930.1 1666119 R 637887 CDS YP_005687931.1 385778766 12421144 complement(1666899..1667855) 1 NC_017304.1 KEGG: cce:Ccel_0593 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase 1667855 12421144 Clo1313_1418 Clostridium thermocellum DSM 1313 RluA family pseudouridine synthase YP_005687931.1 1666899 R 637887 CDS YP_005687932.1 385778767 12421145 1668227..1668487 1 NC_017304.1 hypothetical protein 1668487 12421145 Clo1313_1419 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687932.1 1668227 D 637887 CDS YP_005687933.1 385778768 12421146 1668540..1668713 1 NC_017304.1 KEGG: fal:FRAAL2802 precorrin 6A synthase; hypothetical protein 1668713 12421146 Clo1313_1420 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687933.1 1668540 D 637887 CDS YP_005687934.1 385778769 12421147 1668833..1670056 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 1670056 12421147 Clo1313_1421 Clostridium thermocellum DSM 1313 transposase mutator type YP_005687934.1 1668833 D 637887 CDS YP_005687935.1 385778770 12421148 complement(1670324..1671535) 1 NC_017304.1 KEGG: clj:CLJU_c04430 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1671535 12421148 Clo1313_1422 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005687935.1 1670324 R 637887 CDS YP_005687936.1 385778771 12421149 complement(1671537..1672214) 1 NC_017304.1 KEGG: clj:CLJU_c04440 putative two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 1672214 12421149 Clo1313_1423 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005687936.1 1671537 R 637887 CDS YP_005687937.1 385778772 12421150 1672466..1674052 1 NC_017304.1 PFAM: lipolytic protein G-D-S-L family; Dockerin type 1; KEGG: cfl:Cfla_0383 ricin B lectin; G-D-S-L family lipolytic protein 1674052 12421150 Clo1313_1424 Clostridium thermocellum DSM 1313 G-D-S-L family lipolytic protein YP_005687937.1 1672466 D 637887 CDS YP_005687938.1 385778773 12421151 1674402..1676846 1 NC_017304.1 PFAM: glycoside hydrolase family 5; Dockerin type 1; lipolytic protein G-D-S-L family; KEGG: cac:CA_C0826 endoglucanase family protein 5; glycoside hydrolase 1676846 12421151 Clo1313_1425 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687938.1 1674402 D 637887 CDS YP_005687939.1 385778774 12421152 1677092..1678819 1 NC_017304.1 KEGG: tte:TTE1825 glycosidases; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; alpha amylase 1678819 12421152 Clo1313_1426 Clostridium thermocellum DSM 1313 alpha amylase YP_005687939.1 1677092 D 637887 CDS YP_005687940.1 385778775 12421153 1678963..1680255 1 NC_017304.1 PFAM: Aluminium resistance family protein; KEGG: cce:Ccel_0594 aluminium resistance family protein; aluminum resistance family protein 1680255 12421153 Clo1313_1427 Clostridium thermocellum DSM 1313 aluminum resistance family protein YP_005687940.1 1678963 D 637887 CDS YP_005687941.1 385778776 12421154 1680275..1681543 1 NC_017304.1 KEGG: cce:Ccel_0595 hypothetical protein; hypothetical protein 1681543 12421154 Clo1313_1428 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687941.1 1680275 D 637887 CDS YP_005687942.1 385778777 12421155 1681580..1682284 1 NC_017304.1 PFAM: alanine racemase domain protein; KEGG: cce:Ccel_0596 alanine racemase domain protein; alanine racemase 1682284 12421155 Clo1313_1429 Clostridium thermocellum DSM 1313 alanine racemase YP_005687942.1 1681580 D 637887 CDS YP_005687943.1 385778778 12421156 1682370..1682837 1 NC_017304.1 PFAM: protein of unknown function DUF552; KEGG: cce:Ccel_0597 protein of unknown function DUF552; hypothetical protein 1682837 12421156 Clo1313_1430 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687943.1 1682370 D 637887 CDS YP_005687944.1 385778779 12421157 1682857..1683141 1 NC_017304.1 PFAM: protein of unknown function YGGT; KEGG: cce:Ccel_0598 protein of unknown function YGGT; hypothetical protein 1683141 12421157 Clo1313_1431 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687944.1 1682857 D 637887 CDS YP_005687945.1 385778780 12421158 1683168..1683959 1 NC_017304.1 KEGG: cce:Ccel_0599 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1683959 12421158 Clo1313_1432 Clostridium thermocellum DSM 1313 RNA-binding S4 domain-containing protein YP_005687945.1 1683168 D 637887 CDS YP_005687946.1 385778781 12421159 1683973..1684437 1 NC_017304.1 KEGG: cce:Ccel_0600 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; DivIVA domain 1684437 12421159 Clo1313_1433 Clostridium thermocellum DSM 1313 DivIVA domain YP_005687946.1 1683973 D 637887 CDS YP_005687947.1 385778782 12421160 1684838..1687633 1 NC_017304.1 KEGG: cce:Ccel_1855 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1687633 12421160 Clo1313_1434 Clostridium thermocellum DSM 1313 isoleucyl-tRNA synthetase YP_005687947.1 1684838 D 637887 CDS YP_005687948.1 385778783 12421161 1687712..1688794 1 NC_017304.1 KEGG: cce:Ccel_1854 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 1688794 12421161 Clo1313_1435 Clostridium thermocellum DSM 1313 3-dehydroquinate synthase YP_005687948.1 1687712 D 637887 CDS YP_005687949.1 385778784 12421162 complement(1689003..1689305) 1 NC_017304.1 KEGG: tet:TTHERM_01093530 hypothetical protein; hypothetical protein 1689305 12421162 Clo1313_1436 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687949.1 1689003 R 637887 CDS YP_005687950.1 385778785 12421163 1689756..1690631 1 NC_017304.1 KEGG: cce:Ccel_0620 hypothetical protein; hypothetical protein 1690631 12421163 Clo1313_1437 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687950.1 1689756 D 637887 CDS YP_005687951.1 385778786 12421164 1690693..1692135 1 NC_017304.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: cce:Ccel_1699 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 1692135 12421164 Clo1313_1438 Clostridium thermocellum DSM 1313 MiaB family RNA modification protein YP_005687951.1 1690693 D 637887 CDS YP_005687952.1 385778787 12421165 1692525..1693697 1 NC_017304.1 PFAM: protein of unknown function DUF534; KEGG: pca:Pcar_1057 hypothetical protein; hypothetical protein 1693697 12421165 Clo1313_1439 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687952.1 1692525 D 637887 CDS YP_005687953.1 385778788 12421166 1693865..1695988 1 NC_017304.1 KEGG: btb:BMB171_C0478 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1695988 12421166 Clo1313_1440 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005687953.1 1693865 D 637887 CDS YP_005687954.1 385778789 12421167 1696155..1696643 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dhd:Dhaf_2153 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1696643 12421167 Clo1313_1441 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005687954.1 1696155 D 637887 CDS YP_005687955.1 385778790 12421168 1696706..1697389 1 NC_017304.1 KEGG: dth:DICTH_0356 phosphorylated carbohydrates phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1697389 12421168 Clo1313_1442 Clostridium thermocellum DSM 1313 HAD-superfamily hydrolase YP_005687955.1 1696706 D 637887 CDS YP_005687956.1 385778791 12421169 1697495..1698847 1 NC_017304.1 KEGG: aoe:Clos_0300 copper amine oxidase domain-containing protein; PFAM: copper amine oxidase-like domain-containing protein; SCP-like extracellular; SMART: Allergen V5/Tpx-1 family protein; copper amine oxidase-like domain-containing protein 1698847 12421169 Clo1313_1443 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687956.1 1697495 D 637887 CDS YP_005687957.1 385778792 12421170 1698991..1699383 1 NC_017304.1 KEGG: cce:Ccel_1698 hypothetical protein; hypothetical protein 1699383 12421170 Clo1313_1444 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687957.1 1698991 D 637887 CDS YP_005687958.1 385778793 12421171 1699415..1702027 1 NC_017304.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: cce:Ccel_1697 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS 1702027 12421171 Clo1313_1445 Clostridium thermocellum DSM 1313 DNA mismatch repair protein MutS YP_005687958.1 1699415 D 637887 CDS YP_005687959.1 385778794 12421172 1702097..1704364 1 NC_017304.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: cce:Ccel_1696 DNA mismatch repair protein MutL; SMART: MutL dimerisation; ATP-binding region ATPase domain protein; DNA mismatch repair protein MutL 1704364 12421172 Clo1313_1446 Clostridium thermocellum DSM 1313 DNA mismatch repair protein MutL YP_005687959.1 1702097 D 637887 CDS YP_005687960.1 385778795 12421173 1704382..1705323 1 NC_017304.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: cce:Ccel_1695 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1705323 12421173 Clo1313_1447 Clostridium thermocellum DSM 1313 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005687960.1 1704382 D 637887 CDS YP_005687961.1 385778796 12421174 1705430..1705678 1 NC_017304.1 KEGG: cce:Ccel_1694 RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq 1705678 12421174 Clo1313_1448 Clostridium thermocellum DSM 1313 RNA chaperone Hfq YP_005687961.1 1705430 D 637887 CDS YP_005687962.1 385778797 12421175 complement(1705807..1706448) 1 NC_017304.1 KEGG: cce:Ccel_1693 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; LexA family transcriptional repressor 1706448 12421175 Clo1313_1449 Clostridium thermocellum DSM 1313 LexA family transcriptional repressor YP_005687962.1 1705807 R 637887 CDS YP_005687963.1 385778798 12421176 1706648..1706935 1 NC_017304.1 PFAM: Peptidoglycan-binding lysin domain; KEGG: cce:Ccel_1692 peptidoglycan-binding LysM; Peptidoglycan-binding lysin domain 1706935 12421176 Clo1313_1450 Clostridium thermocellum DSM 1313 Peptidoglycan-binding lysin domain YP_005687963.1 1706648 D 637887 CDS YP_005687964.1 385778799 12421177 1707162..1707515 1 NC_017304.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; KEGG: cce:Ccel_0708 putative helix-turn-helix protein YlxM/p13 family protein; helix-turn-helix protein YlxM/p13 family protein 1707515 12421177 Clo1313_1451 Clostridium thermocellum DSM 1313 helix-turn-helix protein YlxM/p13 family protein YP_005687964.1 1707162 D 637887 CDS YP_005687965.1 385778800 12421178 1707557..1708897 1 NC_017304.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: cce:Ccel_0709 signal recognition particle protein; SMART: AAA ATPase; signal recognition particle protein 1708897 12421178 Clo1313_1452 Clostridium thermocellum DSM 1313 signal recognition particle protein YP_005687965.1 1707557 D 637887 CDS YP_005687966.1 385778801 12421179 1708937..1709182 1 NC_017304.1 KEGG: cce:Ccel_0710 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 1709182 12421179 Clo1313_1453 Clostridium thermocellum DSM 1313 30S ribosomal protein S16 YP_005687966.1 1708937 D 637887 CDS YP_005687967.1 385778802 12421180 1709256..1709486 1 NC_017304.1 KEGG: cce:Ccel_0711 nucleic acid binding protein; nucleic acid binding protein 1709486 12421180 Clo1313_1454 Clostridium thermocellum DSM 1313 nucleic acid binding protein YP_005687967.1 1709256 D 637887 CDS YP_005687968.1 385778803 12421181 1709603..1710127 1 NC_017304.1 KEGG: cce:Ccel_0712 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 1710127 12421181 Clo1313_1455 Clostridium thermocellum DSM 1313 16S rRNA processing protein RimM YP_005687968.1 1709603 D 637887 CDS YP_005687969.1 385778804 12421182 1710114..1710857 1 NC_017304.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: cce:Ccel_0713 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1710857 12421182 Clo1313_1456 Clostridium thermocellum DSM 1313 tRNA (guanine-N1)-methyltransferase YP_005687969.1 1710114 D 637887 CDS YP_005687970.1 385778805 12421183 1711008..1711352 1 NC_017304.1 KEGG: cce:Ccel_0714 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 1711352 12421183 Clo1313_1457 Clostridium thermocellum DSM 1313 50S ribosomal protein L19 YP_005687970.1 1711008 D 637887 CDS YP_005687971.1 385778806 12421184 1711507..1712172 1 NC_017304.1 KEGG: cbi:CLJ_B0662 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 1712172 12421184 Clo1313_1458 Clostridium thermocellum DSM 1313 signal peptidase I YP_005687971.1 1711507 D 637887 CDS YP_005687972.1 385778807 12421185 1712197..1713072 1 NC_017304.1 KEGG: cce:Ccel_0716 GTP1/OBG protein; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YlqF 1713072 12421185 Clo1313_1459 Clostridium thermocellum DSM 1313 ribosome biogenesis GTP-binding protein YlqF YP_005687972.1 1712197 D 637887 CDS YP_005687973.1 385778808 12421186 1713092..1713745 1 NC_017304.1 KEGG: ckr:CKR_3110 hypothetical protein; hypothetical protein 1713745 12421186 Clo1313_1460 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687973.1 1713092 D 637887 CDS YP_005687974.1 385778809 12421187 1713807..1714592 1 NC_017304.1 KEGG: cce:Ccel_0717 ribonuclease HII; PFAM: ribonuclease HII/HIII; Ribonuclease H 1714592 12421187 Clo1313_1461 Clostridium thermocellum DSM 1313 Ribonuclease H YP_005687974.1 1713807 D 637887 CDS YP_005687975.1 385778810 12421188 1714630..1716264 1 NC_017304.1 KEGG: cce:Ccel_0718 hypothetical protein; hypothetical protein 1716264 12421188 Clo1313_1462 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687975.1 1714630 D 637887 CDS YP_005687976.1 385778811 12421189 1716282..1716566 1 NC_017304.1 PFAM: type III secretion exporter; KEGG: cce:Ccel_0719 flagellar biosynthesis protein; type III secretion exporter 1716566 12421189 Clo1313_1463 Clostridium thermocellum DSM 1313 type III secretion exporter YP_005687976.1 1716282 D 637887 CDS YP_005687977.1 385778812 12421190 1716581..1716973 1 NC_017304.1 PFAM: Uncharacterised protein family UPF0102; KEGG: cce:Ccel_0720 hypothetical protein; hypothetical protein 1716973 12421190 Clo1313_1464 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687977.1 1716581 D 637887 CDS YP_005687978.1 385778813 12421191 1717112..1717786 1 NC_017304.1 KEGG: csc:Csac_0787 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC 1717786 12421191 Clo1313_1465 Clostridium thermocellum DSM 1313 DNA repair protein RadC YP_005687978.1 1717112 D 637887 CDS YP_005687979.1 385778814 12421192 1717960..1718895 1 NC_017304.1 KEGG: cce:Ccel_0721 peptidase M19 renal dipeptidase; PFAM: peptidase M19 renal dipeptidase; membrane dipeptidase 1718895 12421192 Clo1313_1466 Clostridium thermocellum DSM 1313 membrane dipeptidase YP_005687979.1 1717960 D 637887 CDS YP_005687980.1 385778815 12421193 1719620..1720807 1 NC_017304.1 PFAM: aminotransferase class I and II; KEGG: hmo:HM1_1327 aspartate aminotransferase; class I and II aminotransferase 1720807 12421193 Clo1313_1467 Clostridium thermocellum DSM 1313 class I and II aminotransferase YP_005687980.1 1719620 D 637887 CDS YP_005687981.1 385778816 12421194 1721178..1722011 1 NC_017304.1 KEGG: pjd:Pjdr2_4681 hypothetical protein; hypothetical protein 1722011 12421194 Clo1313_1468 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687981.1 1721178 D 637887 CDS YP_005687982.1 385778817 12421195 1722404..1722979 1 NC_017304.1 KEGG: pcb:PC000183.01.0 hypothetical protein; hypothetical protein 1722979 12421195 Clo1313_1469 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687982.1 1722404 D 637887 CDS YP_005687983.1 385778818 12421196 1723073..1723297 1 NC_017304.1 KEGG: mba:Mbar_A2460 hypothetical protein; hypothetical protein 1723297 12421196 Clo1313_1470 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687983.1 1723073 D 637887 CDS YP_005687984.1 385778819 12421197 1723639..1724178 1 NC_017304.1 KEGG: cpy:Cphy_0898 XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin 1724178 12421197 Clo1313_1471 Clostridium thermocellum DSM 1313 cupin YP_005687984.1 1723639 D 637887 CDS YP_005687985.1 385778820 12421198 1724188..1725246 1 NC_017304.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: cpy:Cphy_0897 spermidine/putrescine ABC transporter ATPase subunit; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1725246 12421198 Clo1313_1472 Clostridium thermocellum DSM 1313 spermidine/putrescine ABC transporter ATPase YP_005687985.1 1724188 D 637887 CDS YP_005687986.1 385778821 12421199 1725243..1726070 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0890 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1726070 12421199 Clo1313_1473 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005687986.1 1725243 D 637887 CDS YP_005687987.1 385778822 12421200 1726064..1726858 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cce:Ccel_0891 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1726858 12421200 Clo1313_1474 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005687987.1 1726064 D 637887 CDS YP_005687988.1 385778823 12421201 1726855..1727919 1 NC_017304.1 PFAM: extracellular solute-binding protein family 1; KEGG: cpy:Cphy_0894 extracellular solute-binding protein; extracellular solute-binding protein 1727919 12421201 Clo1313_1475 Clostridium thermocellum DSM 1313 extracellular solute-binding protein YP_005687988.1 1726855 D 637887 CDS YP_005687989.1 385778824 12421202 1728288..1728896 1 NC_017304.1 PFAM: Peptidase S7 flavivirus helicase (NS3); KEGG: amr:AM1_5342 hypothetical protein; Peptidase S7 flavivirus helicase (NS3) 1728896 12421202 Clo1313_1476 Clostridium thermocellum DSM 1313 Peptidase S7 flavivirus helicase (NS3) YP_005687989.1 1728288 D 637887 CDS YP_005687990.1 385778825 12421203 complement(1729051..1731243) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: cce:Ccel_0731 glycoside hydrolase family 9; glycoside hydrolase 1731243 12421203 Clo1313_1477 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005687990.1 1729051 R 637887 CDS YP_005687991.1 385778826 12421204 1731550..1734402 1 NC_017304.1 KEGG: cpy:Cphy_1188 peptidase S41; PFAM: copper amine oxidase-like domain-containing protein; peptidase S41; SMART: peptidase S41; copper amine oxidase-like domain-containing protein 1734402 12421204 Clo1313_1478 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005687991.1 1731550 D 637887 CDS YP_005687992.1 385778827 12421205 1734561..1736015 1 NC_017304.1 KEGG: ere:EUBREC_0466 hypothetical protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1736015 12421205 Clo1313_1479 Clostridium thermocellum DSM 1313 MATE efflux family protein YP_005687992.1 1734561 D 637887 CDS YP_005687993.1 385778828 12421206 1736196..1736606 1 NC_017304.1 KEGG: dpe:Dper_GL16897 GL16897 gene product from transcript GL16897-RA; hypothetical protein 1736606 12421206 Clo1313_1480 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687993.1 1736196 D 637887 CDS YP_005687994.1 385778829 12421207 1736826..1738253 1 NC_017304.1 KEGG: cce:Ccel_0723 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; adenylosuccinate lyase 1738253 12421207 Clo1313_1481 Clostridium thermocellum DSM 1313 adenylosuccinate lyase YP_005687994.1 1736826 D 637887 CDS YP_005687995.1 385778830 12421208 1738472..1739209 1 NC_017304.1 KEGG: cce:Ccel_0724 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1739209 12421208 Clo1313_1482 Clostridium thermocellum DSM 1313 GntR family transcriptional regulator YP_005687995.1 1738472 D 637887 CDS YP_005687996.1 385778831 12421209 complement(1739224..1740948) 1 NC_017304.1 KEGG: cce:Ccel_2463 pyrrolo-quinoline quinone; pyrrolo-quinoline quinone 1740948 12421209 Clo1313_1483 Clostridium thermocellum DSM 1313 pyrrolo-quinoline quinone YP_005687996.1 1739224 R 637887 CDS YP_005687997.1 385778832 12421210 1741149..1741361 1 NC_017304.1 KEGG: cce:Ccel_1715 copper ion binding protein; TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; copper ion binding protein 1741361 12421210 Clo1313_1484 Clostridium thermocellum DSM 1313 copper ion binding protein YP_005687997.1 1741149 D 637887 CDS YP_005687998.1 385778833 12421211 complement(1741616..1741741) 1 NC_017304.1 hypothetical protein 1741741 12421211 Clo1313_1485 Clostridium thermocellum DSM 1313 hypothetical protein YP_005687998.1 1741616 R 637887 CDS YP_005687999.1 385778834 12421212 1742020..1742649 1 NC_017304.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: dae:Dtox_0929 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 1742649 12421212 Clo1313_1486 Clostridium thermocellum DSM 1313 4'-phosphopantetheinyl transferase YP_005687999.1 1742020 D 637887 CDS YP_005688000.1 385778835 12421213 1743451..1747368 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; KEGG: ate:Athe_1866 mannan endo-1,4-beta-mannosidase., cellulase; cellulosome anchoring protein cohesin subunit 1747368 12421213 Clo1313_1487 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005688000.1 1743451 D 637887 CDS YP_005688001.1 385778836 12421214 1747548..1748354 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; KEGG: bbz:BbuZS7_I25 putative surface antigen; cellulosome anchoring protein cohesin subunit 1748354 12421214 Clo1313_1488 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005688001.1 1747548 D 637887 CDS YP_005688002.1 385778837 12421215 1748476..1749597 1 NC_017304.1 PFAM: Peptidase M23; KEGG: cce:Ccel_2905 peptidase M23; peptidase M23 1749597 12421215 Clo1313_1489 Clostridium thermocellum DSM 1313 peptidase M23 YP_005688002.1 1748476 D 637887 CDS YP_005688003.1 385778838 12421216 1750245..1750901 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: cce:Ccel_2317 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1750901 12421216 Clo1313_1490 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005688003.1 1750245 D 637887 CDS YP_005688004.1 385778839 12421217 complement(1750995..1752179) 1 NC_017304.1 TIGRFAM: chorismate synthase; KEGG: cce:Ccel_2427 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1752179 12421217 Clo1313_1491 Clostridium thermocellum DSM 1313 chorismate synthase YP_005688004.1 1750995 R 637887 CDS YP_005688005.1 385778840 12421218 complement(1752241..1752753) 1 NC_017304.1 KEGG: mhu:Mhun_1850 shikimate kinase; PFAM: shikimate kinase; shikimate kinase 1752753 12421218 Clo1313_1492 Clostridium thermocellum DSM 1313 shikimate kinase YP_005688005.1 1752241 R 637887 CDS YP_005688006.1 385778841 12421219 complement(1752898..1753581) 1 NC_017304.1 KEGG: amt:Amet_1997 hypothetical protein; hypothetical protein 1753581 12421219 Clo1313_1493 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688006.1 1752898 R 637887 CDS YP_005688007.1 385778842 12421220 complement(1753788..1755401) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: amt:Amet_1994 hypothetical protein; Dockerin type 1 1755401 12421220 Clo1313_1494 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688007.1 1753788 R 637887 CDS YP_005688008.1 385778843 12421221 1755676..1756668 1 NC_017304.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cce:Ccel_1654 site-specific tyrosine recombinase XerC; integrase family protein 1756668 12421221 Clo1313_1495 Clostridium thermocellum DSM 1313 integrase family protein YP_005688008.1 1755676 D 637887 CDS YP_005688009.1 385778844 12421222 1756837..1757763 1 NC_017304.1 KEGG: cce:Ccel_0666 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 1757763 12421222 Clo1313_1496 Clostridium thermocellum DSM 1313 cell envelope-related transcriptional attenuator YP_005688009.1 1756837 D 637887 CDS YP_005688010.1 385778845 12421223 complement(1757829..1759265) 1 NC_017304.1 PFAM: peptidase M18 aminopeptidase I; KEGG: cce:Ccel_1926 putative aminopeptidase 1; peptidase M18 aminopeptidase I 1759265 12421223 Clo1313_1497 Clostridium thermocellum DSM 1313 peptidase M18 aminopeptidase I YP_005688010.1 1757829 R 637887 CDS YP_005688011.1 385778846 12421224 complement(1759444..1760940) 1 NC_017304.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; KEGG: drt:Dret_0887 response regulator receiver modulated metal dependent phosphohydrolase; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase 1760940 12421224 Clo1313_1498 Clostridium thermocellum DSM 1313 response regulator receiver modulated metal dependent phosphohydrolase YP_005688011.1 1759444 R 637887 CDS YP_005688012.1 385778847 12421225 1761317..1762114 1 NC_017304.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: csc:Csac_2251 HisJ family histidinol phosphate phosphatase; SMART: phosphoesterase PHP domain protein; HisJ family histidinol phosphate phosphatase 1762114 12421225 Clo1313_1499 Clostridium thermocellum DSM 1313 HisJ family histidinol phosphate phosphatase YP_005688012.1 1761317 D 637887 CDS YP_005688013.1 385778848 12421226 complement(1762313..1763539) 1 NC_017304.1 TIGRFAM: tyrosyl-tRNA synthetase; KEGG: tpd:Teth39_0108 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 1763539 12421226 Clo1313_1500 Clostridium thermocellum DSM 1313 tyrosyl-tRNA synthetase YP_005688013.1 1762313 R 637887 CDS YP_005688014.1 385778849 12421227 complement(1763966..1765045) 1 NC_017304.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: cce:Ccel_1930 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 1765045 12421227 Clo1313_1501 Clostridium thermocellum DSM 1313 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_005688014.1 1763966 R 637887 CDS YP_005688015.1 385778850 12421228 complement(1765064..1765513) 1 NC_017304.1 KEGG: cce:Ccel_1931 FeS cluster assembly scaffold protein NifU; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; FeS cluster assembly scaffold protein NifU 1765513 12421228 Clo1313_1502 Clostridium thermocellum DSM 1313 FeS cluster assembly scaffold protein NifU YP_005688015.1 1765064 R 637887 CDS YP_005688016.1 385778851 12421229 complement(1765515..1766699) 1 NC_017304.1 TIGRFAM: cysteine desulfurase NifS; KEGG: cce:Ccel_1932 cysteine desulfurase NifS; PFAM: aminotransferase class V; cysteine desulfurase NifS 1766699 12421229 Clo1313_1503 Clostridium thermocellum DSM 1313 cysteine desulfurase NifS YP_005688016.1 1765515 R 637887 CDS YP_005688017.1 385778852 12421230 complement(1766828..1767259) 1 NC_017304.1 KEGG: cce:Ccel_1933 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator 1767259 12421230 Clo1313_1504 Clostridium thermocellum DSM 1313 AsnC family transcriptional regulator YP_005688017.1 1766828 R 637887 CDS YP_005688018.1 385778853 12421231 complement(1767409..1767696) 1 NC_017304.1 KEGG: cce:Ccel_1934 hypothetical protein; hypothetical protein 1767696 12421231 Clo1313_1505 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688018.1 1767409 R 637887 CDS YP_005688019.1 385778854 12421232 complement(1767788..1767943) 1 NC_017304.1 KEGG: cce:Ccel_1935 hypothetical protein; hypothetical protein 1767943 12421232 Clo1313_1506 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688019.1 1767788 R 637887 CDS YP_005688020.1 385778855 12421233 complement(1767990..1768772) 1 NC_017304.1 PFAM: MCP methyltransferase CheR-type; KEGG: cce:Ccel_1727 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1768772 12421233 Clo1313_1507 Clostridium thermocellum DSM 1313 chemotaxis protein CheR YP_005688020.1 1767990 R 637887 CDS YP_005688021.1 385778856 12421234 complement(1768876..1769286) 1 NC_017304.1 PFAM: nucleoside diphosphate kinase; KEGG: apo:Arcpr_0498 nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 1769286 12421234 Clo1313_1508 Clostridium thermocellum DSM 1313 nucleoside-diphosphate kinase YP_005688021.1 1768876 R 637887 CDS YP_005688022.1 385778857 12421235 complement(1769503..1769877) 1 NC_017304.1 KEGG: csc:Csac_1308 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 1769877 12421235 Clo1313_1509 Clostridium thermocellum DSM 1313 S-adenosylmethionine decarboxylase YP_005688022.1 1769503 R 637887 CDS YP_005688023.1 385778858 12421236 complement(1770230..1772314) 1 NC_017304.1 KEGG: cce:Ccel_1728 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein; hydroxymethylbutenyl pyrophosphate reductase 1772314 12421236 Clo1313_1510 Clostridium thermocellum DSM 1313 hydroxymethylbutenyl pyrophosphate reductase YP_005688023.1 1770230 R 637887 CDS YP_005688024.1 385778859 12421237 complement(1772316..1772927) 1 NC_017304.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: bbe:BBR47_24420 1-acylglycerol-3-phosphate O-acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1772927 12421237 Clo1313_1511 Clostridium thermocellum DSM 1313 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005688024.1 1772316 R 637887 CDS YP_005688025.1 385778860 12421238 complement(1772917..1773600) 1 NC_017304.1 KEGG: cce:Ccel_1729 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1773600 12421238 Clo1313_1512 Clostridium thermocellum DSM 1313 cytidylate kinase YP_005688025.1 1772917 R 637887 CDS YP_005688026.1 385778861 12421239 complement(1773668..1774024) 1 NC_017304.1 KEGG: cce:Ccel_1730 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; chorismate mutase 1774024 12421239 Clo1313_1513 Clostridium thermocellum DSM 1313 chorismate mutase YP_005688026.1 1773668 R 637887 CDS YP_005688027.1 385778862 12421240 complement(1774107..1774541) 1 NC_017304.1 manually curated; KEGG: cce:Ccel_1731 hypothetical protein; hypothetical protein 1774541 12421240 Clo1313_1514 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688027.1 1774107 R 637887 CDS YP_005688028.1 385778863 12421241 complement(1774679..1775179) 1 NC_017304.1 KEGG: cce:Ccel_1732 hypothetical protein; hypothetical protein 1775179 12421241 Clo1313_1515 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688028.1 1774679 R 637887 CDS YP_005688029.1 385778864 12421242 complement(1775285..1776514) 1 NC_017304.1 PFAM: HI0933 family protein; KEGG: cce:Ccel_1733 HI0933 family protein; hypothetical protein 1776514 12421242 Clo1313_1516 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688029.1 1775285 R 637887 CDS YP_005688030.1 385778865 12421243 complement(1776537..1777166) 1 NC_017304.1 KEGG: ate:Athe_1322 phosphoglycerate mutase; manually curated; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1777166 12421243 Clo1313_1517 Clostridium thermocellum DSM 1313 phosphoglycerate mutase YP_005688030.1 1776537 R 637887 CDS YP_005688031.1 385778866 12421244 complement(1777171..1778070) 1 NC_017304.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: cce:Ccel_1734 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1778070 12421244 Clo1313_1518 Clostridium thermocellum DSM 1313 RpiR family transcriptional regulator YP_005688031.1 1777171 R 637887 CDS YP_005688032.1 385778867 12421245 complement(1778095..1778262) 1 NC_017304.1 KEGG: ate:Athe_1320 hypothetical protein; hypothetical protein 1778262 12421245 Clo1313_1519 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688032.1 1778095 R 637887 CDS YP_005688033.1 385778868 12421246 1778442..1779089 1 NC_017304.1 KEGG: cce:Ccel_1735 hypothetical protein; hypothetical protein 1779089 12421246 Clo1313_1520 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688033.1 1778442 D 637887 CDS YP_005688034.1 385778869 12421247 complement(1779150..1779392) 1 NC_017304.1 manually curated; KEGG: amt:Amet_0245 hypothetical protein; hypothetical protein 1779392 12421247 Clo1313_1521 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688034.1 1779150 R 637887 CDS YP_005688035.1 385778870 12421248 complement(1779510..1780037) 1 NC_017304.1 KEGG: dhd:Dhaf_0979 hypothetical protein; hypothetical protein 1780037 12421248 Clo1313_1522 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688035.1 1779510 R 637887 CDS YP_005688036.1 385778871 12421249 complement(1780291..1781688) 1 NC_017304.1 PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; KEGG: cce:Ccel_1736 oxaloacetate decarboxylase; carboxylase 1781688 12421249 Clo1313_1523 Clostridium thermocellum DSM 1313 carboxylase YP_005688036.1 1780291 R 637887 CDS YP_005688037.1 385778872 12421250 complement(1781832..1782230) 1 NC_017304.1 KEGG: aoe:Clos_0442 biotin/lipoyl attachment domain-containing protein; manually curated; PFAM: biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 1782230 12421250 Clo1313_1524 Clostridium thermocellum DSM 1313 biotin/lipoyl attachment domain-containing protein YP_005688037.1 1781832 R 637887 CDS YP_005688038.1 385778873 12421251 complement(1782257..1782427) 1 NC_017304.1 KEGG: tmt:Tmath_2009 sodium pump decarboxylase gamma subunit; sodium pump decarboxylase subunit gamma 1782427 12421251 Clo1313_1525 Clostridium thermocellum DSM 1313 sodium pump decarboxylase subunit gamma YP_005688038.1 1782257 R 637887 CDS YP_005688039.1 385778874 12421252 complement(1782455..1784005) 1 NC_017304.1 PFAM: carboxyl transferase; KEGG: cce:Ccel_1738 carboxyl transferase; carboxyl transferase 1784005 12421252 Clo1313_1526 Clostridium thermocellum DSM 1313 carboxyl transferase YP_005688039.1 1782455 R 637887 CDS YP_005688040.1 385778875 12421253 1784366..1785100 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: tte:TTE1419 hypothetical protein; type IV pilus assembly PilZ 1785100 12421253 Clo1313_1527 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005688040.1 1784366 D 637887 CDS YP_005688041.1 385778876 12421254 complement(1785187..1785753) 1 NC_017304.1 PFAM: rRNA methylase; KEGG: cce:Ccel_1741 putative rRNA methylase; rRNA methylase 1785753 12421254 Clo1313_1528 Clostridium thermocellum DSM 1313 rRNA methylase YP_005688041.1 1785187 R 637887 CDS YP_005688042.1 385778877 12421255 complement(1785762..1786631) 1 NC_017304.1 KEGG: dae:Dtox_3566 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; agmatinase 1786631 12421255 Clo1313_1529 Clostridium thermocellum DSM 1313 agmatinase YP_005688042.1 1785762 R 637887 CDS YP_005688043.1 385778878 12421256 complement(1786662..1787489) 1 NC_017304.1 KEGG: ate:Athe_1314 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase 1787489 12421256 Clo1313_1530 Clostridium thermocellum DSM 1313 spermidine synthase YP_005688043.1 1786662 R 637887 CDS YP_005688044.1 385778879 12421257 complement(1787715..1788434) 1 NC_017304.1 KEGG: cce:Ccel_1743 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1788434 12421257 Clo1313_1531 Clostridium thermocellum DSM 1313 pseudouridine synthase YP_005688044.1 1787715 R 637887 CDS YP_005688045.1 385778880 12421258 complement(1788632..1789120) 1 NC_017304.1 KEGG: cce:Ccel_1744 sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ; sporulation protein YtfJ 1789120 12421258 Clo1313_1532 Clostridium thermocellum DSM 1313 sporulation protein YtfJ YP_005688045.1 1788632 R 637887 CDS YP_005688046.1 385778881 12421259 complement(1789164..1789772) 1 NC_017304.1 KEGG: hor:Hore_07190 hypothetical protein; hypothetical protein 1789772 12421259 Clo1313_1533 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688046.1 1789164 R 637887 CDS YP_005688047.1 385778882 12421260 complement(1789877..1790446) 1 NC_017304.1 PFAM: RDD domain containing protein; KEGG: cpy:Cphy_1188 peptidase S41; RDD domain-containing protein 1790446 12421260 Clo1313_1534 Clostridium thermocellum DSM 1313 RDD domain-containing protein YP_005688047.1 1789877 R 637887 CDS YP_005688048.1 385778883 12421261 complement(1790477..1791073) 1 NC_017304.1 KEGG: cce:Ccel_1746 chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; chromosome segregation and condensation protein ScpB 1791073 12421261 Clo1313_1535 Clostridium thermocellum DSM 1313 chromosome segregation and condensation protein ScpB YP_005688048.1 1790477 R 637887 CDS YP_005688049.1 385778884 12421262 complement(1791093..1791887) 1 NC_017304.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: cce:Ccel_1747 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 1791887 12421262 Clo1313_1536 Clostridium thermocellum DSM 1313 chromosome segregation and condensation protein ScpA YP_005688049.1 1791093 R 637887 CDS YP_005688050.1 385778885 12421263 complement(1791926..1792951) 1 NC_017304.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: csc:Csac_0937 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 1792951 12421263 Clo1313_1537 Clostridium thermocellum DSM 1313 tryptophanyl-tRNA synthetase YP_005688050.1 1791926 R 637887 CDS YP_005688051.1 385778886 12421264 complement(1793008..1793679) 1 NC_017304.1 PFAM: peptidase M50; KEGG: drt:Dret_0766 peptidase M50; peptidase M50 1793679 12421264 Clo1313_1538 Clostridium thermocellum DSM 1313 peptidase M50 YP_005688051.1 1793008 R 637887 CDS YP_005688052.1 385778887 12421265 complement(1793785..1796418) 1 NC_017304.1 KEGG: tjr:TherJR_1640 polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; Polynucleotide adenylyltransferase region; SMART: CBS domain containing protein; hypothetical protein 1796418 12421265 Clo1313_1539 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688052.1 1793785 R 637887 CDS YP_005688053.1 385778888 12421266 complement(1796624..1797937) 1 NC_017304.1 KEGG: csc:Csac_0935 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 1797937 12421266 Clo1313_1540 Clostridium thermocellum DSM 1313 diaminopimelate decarboxylase YP_005688053.1 1796624 R 637887 CDS YP_005688054.1 385778889 12421267 1798184..1799161 1 NC_017304.1 KEGG: pdi:BDI_3154 putative Na+-dependent phosphate transporter; hypothetical protein 1799161 12421267 Clo1313_1541 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688054.1 1798184 D 637887 CDS YP_005688055.1 385778890 12421268 complement(1799471..1800964) 1 NC_017304.1 KEGG: bbe:BBR47_06650 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; IMP dehydrogenase 1800964 12421268 Clo1313_1542 Clostridium thermocellum DSM 1313 IMP dehydrogenase YP_005688055.1 1799471 R 637887 CDS YP_005688056.1 385778891 12421269 complement(1801182..1801835) 1 NC_017304.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: csc:Csac_0612 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 1801835 12421269 Clo1313_1543 Clostridium thermocellum DSM 1313 lysine exporter protein LysE/YggA YP_005688056.1 1801182 R 637887 CDS YP_005688057.1 385778892 12421270 complement(1802049..1803263) 1 NC_017304.1 KEGG: cce:Ccel_1749 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase 1803263 12421270 Clo1313_1544 Clostridium thermocellum DSM 1313 serine-type D-Ala-D-Ala carboxypeptidase YP_005688057.1 1802049 R 637887 CDS YP_005688058.1 385778893 12421271 complement(1803355..1804656) 1 NC_017304.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: ckr:CKR_1140 hypothetical protein; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; pyrimidine-nucleoside phosphorylase 1804656 12421271 Clo1313_1545 Clostridium thermocellum DSM 1313 pyrimidine-nucleoside phosphorylase YP_005688058.1 1803355 R 637887 CDS YP_005688059.1 385778894 12421272 complement(1804688..1805854) 1 NC_017304.1 TIGRFAM: phosphopentomutase; KEGG: chy:CHY_1963 phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase 1805854 12421272 Clo1313_1546 Clostridium thermocellum DSM 1313 phosphopentomutase YP_005688059.1 1804688 R 637887 CDS YP_005688060.1 385778895 12421273 complement(1806007..1806891) 1 NC_017304.1 KEGG: cce:Ccel_1751 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD 1806891 12421273 Clo1313_1547 Clostridium thermocellum DSM 1313 tyrosine recombinase XerD YP_005688060.1 1806007 R 637887 CDS YP_005688061.1 385778896 12421274 complement(1807248..1807877) 1 NC_017304.1 KEGG: cce:Ccel_1752 stage II sporulation protein M; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; stage II sporulation protein M 1807877 12421274 Clo1313_1548 Clostridium thermocellum DSM 1313 stage II sporulation protein M YP_005688061.1 1807248 R 637887 CDS YP_005688062.1 385778897 12421275 complement(1808116..1808664) 1 NC_017304.1 PFAM: NUDIX hydrolase; KEGG: cce:Ccel_1753 NUDIX hydrolase; NUDIX hydrolase 1808664 12421275 Clo1313_1549 Clostridium thermocellum DSM 1313 NUDIX hydrolase YP_005688062.1 1808116 R 637887 CDS YP_005688063.1 385778898 12421276 complement(1808685..1809128) 1 NC_017304.1 KEGG: cce:Ccel_1754 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H 1809128 12421276 Clo1313_1550 Clostridium thermocellum DSM 1313 Ribonuclease H YP_005688063.1 1808685 R 637887 CDS YP_005688064.1 385778899 12421277 complement(1809242..1810057) 1 NC_017304.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: cce:Ccel_1755 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1810057 12421277 Clo1313_1551 Clostridium thermocellum DSM 1313 pyrroline-5-carboxylate reductase YP_005688064.1 1809242 R 637887 CDS YP_005688065.1 385778900 12421279 1810746..1811225 1 NC_017304.1 KEGG: amt:Amet_4410 hypothetical protein; hypothetical protein 1811225 12421279 Clo1313_1552 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688065.1 1810746 D 637887 CDS YP_005688066.1 385778901 12421280 complement(1811227..1812324) 1 NC_017304.1 KEGG: cce:Ccel_0522 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein 1812324 12421280 Clo1313_1553 Clostridium thermocellum DSM 1313 spore germination protein YP_005688066.1 1811227 R 637887 CDS YP_005688067.1 385778902 12421281 complement(1812339..1812503) 1 NC_017304.1 manually curated; KEGG: sth:STH2455 hypothetical protein; hypothetical protein 1812503 12421281 Clo1313_1554 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688067.1 1812339 R 637887 CDS YP_005688068.1 385778903 12421282 complement(1812519..1813829) 1 NC_017304.1 KEGG: cce:Ccel_1969 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; Ger(x)C family germination protein 1813829 12421282 Clo1313_1555 Clostridium thermocellum DSM 1313 Ger(x)C family germination protein YP_005688068.1 1812519 R 637887 CDS YP_005688069.1 385778904 12421283 complement(1813778..1814929) 1 NC_017304.1 KEGG: cce:Ccel_0522 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein 1814929 12421283 Clo1313_1556 Clostridium thermocellum DSM 1313 spore germination protein YP_005688069.1 1813778 R 637887 CDS YP_005688070.1 385778905 12421284 complement(1814963..1816732) 1 NC_017304.1 PFAM: GerA spore germination protein; KEGG: cce:Ccel_0521 GerA spore germination protein; GerA spore germination protein 1816732 12421284 Clo1313_1557 Clostridium thermocellum DSM 1313 GerA spore germination protein YP_005688070.1 1814963 R 637887 CDS YP_005688071.1 385778906 12421285 complement(1816919..1817788) 1 NC_017304.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: cpy:Cphy_3821 band 7 protein; SMART: band 7 protein; HflC protein 1817788 12421285 Clo1313_1558 Clostridium thermocellum DSM 1313 HflC protein YP_005688071.1 1816919 R 637887 CDS YP_005688072.1 385778907 12421286 complement(1817790..1818758) 1 NC_017304.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: cpy:Cphy_3822 HflK protein; SMART: band 7 protein; HflK protein 1818758 12421286 Clo1313_1559 Clostridium thermocellum DSM 1313 HflK protein YP_005688072.1 1817790 R 637887 CDS YP_005688073.1 385778908 12421287 complement(1818938..1819750) 1 NC_017304.1 PFAM: 3D domain-containing protein; KEGG: cce:Ccel_0518 3D domain protein; hypothetical protein 1819750 12421287 Clo1313_1560 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688073.1 1818938 R 637887 CDS YP_005688074.1 385778909 12421289 1820161..1820730 1 NC_017304.1 KEGG: nth:Nther_0814 hypothetical protein; hypothetical protein 1820730 12421289 Clo1313_1561 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688074.1 1820161 D 637887 CDS YP_005688075.1 385778910 12421291 complement(1821046..1822761) 1 NC_017304.1 KEGG: scl:sce4015 hypothetical protein; PFAM: Ricin B lectin; glycoside hydrolase family 43; Dockerin type 1; SMART: Ricin B lectin; Ricin B lectin 1822761 12421291 Clo1313_1563 Clostridium thermocellum DSM 1313 Ricin B lectin YP_005688075.1 1821046 R 637887 CDS YP_005688076.1 385778911 12421292 complement(1822966..1825413) 1 NC_017304.1 PFAM: glycoside hydrolase family 81; Dockerin type 1; KEGG: hau:Haur_1428 ricin B lectin; glycoside hydrolase 1825413 12421292 Clo1313_1564 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688076.1 1822966 R 637887 CDS YP_005688077.1 385778912 12421293 1825631..1826119 1 NC_017304.1 KEGG: amt:Amet_4593 hypothetical protein; hypothetical protein 1826119 12421293 Clo1313_1565 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688077.1 1825631 D 637887 CDS YP_005688078.1 385778913 12421294 complement(1826135..1826686) 1 NC_017304.1 KEGG: dal:Dalk_2729 hypothetical protein; hypothetical protein 1826686 12421294 Clo1313_1566 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688078.1 1826135 R 637887 CDS YP_005688079.1 385778914 12421295 1826899..1827498 1 NC_017304.1 KEGG: cce:Ccel_1397 hypothetical protein; hypothetical protein 1827498 12421295 Clo1313_1567 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688079.1 1826899 D 637887 CDS YP_005688080.1 385778915 12421296 complement(1827585..1827758) 1 NC_017304.1 KEGG: cce:Ccel_1875 hypothetical protein; hypothetical protein 1827758 12421296 Clo1313_1568 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688080.1 1827585 R 637887 CDS YP_005688081.1 385778916 12421297 complement(1828014..1829120) 1 NC_017304.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: cce:Ccel_2409 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 1829120 12421297 Clo1313_1569 Clostridium thermocellum DSM 1313 type IV pilus assembly protein PilM YP_005688081.1 1828014 R 637887 CDS YP_005688082.1 385778917 12421298 complement(1829427..1830572) 1 NC_017304.1 KEGG: cce:Ccel_1876 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; cysteine desulfurase 1830572 12421298 Clo1313_1570 Clostridium thermocellum DSM 1313 cysteine desulfurase YP_005688082.1 1829427 R 637887 CDS YP_005688083.1 385778918 12421299 complement(1830796..1832172) 1 NC_017304.1 KEGG: amt:Amet_4105 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin and thiamin synthesis associated protein 1832172 12421299 Clo1313_1571 Clostridium thermocellum DSM 1313 biotin and thiamin synthesis associated protein YP_005688083.1 1830796 R 637887 CDS YP_005688084.1 385778919 12421300 complement(1832486..1832749) 1 NC_017304.1 KEGG: tpd:Teth39_0873 hypothetical protein; hypothetical protein 1832749 12421300 Clo1313_1572 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688084.1 1832486 R 637887 CDS YP_005688085.1 385778920 12421301 complement(1832877..1833113) 1 NC_017304.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bmj:BMULJ_03723 hypothetical protein; 4-oxalocrotonate tautomerase 1833113 12421301 Clo1313_1573 Clostridium thermocellum DSM 1313 4-oxalocrotonate tautomerase YP_005688085.1 1832877 R 637887 CDS YP_005688086.1 385778921 12421302 complement(1833196..1833870) 1 NC_017304.1 KEGG: pcb:PC000305.00.0 hypothetical protein; hypothetical protein 1833870 12421302 Clo1313_1574 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688086.1 1833196 R 637887 CDS YP_005688087.1 385778922 12421303 complement(1833863..1834363) 1 NC_017304.1 KEGG: ptm:GSPATT00033380001 hypothetical protein; hypothetical protein 1834363 12421303 Clo1313_1575 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688087.1 1833863 R 637887 CDS YP_005688088.1 385778923 12421304 complement(1834486..1834779) 1 NC_017304.1 manually curated; KEGG: bha:BH3686 hypothetical protein; hypothetical protein 1834779 12421304 Clo1313_1576 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688088.1 1834486 R 637887 CDS YP_005688089.1 385778924 12421305 complement(1834907..1835236) 1 NC_017304.1 KEGG: glo:Glov_2573 ATPase, P-type (transporting), HAD superfamily, subfamily IC; hypothetical protein 1835236 12421305 Clo1313_1577 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688089.1 1834907 R 637887 CDS YP_005688090.1 385778925 12421307 1835747..1837387 1 NC_017304.1 KEGG: eel:EUBELI_20357 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 1837387 12421307 Clo1313_1578 Clostridium thermocellum DSM 1313 glutamyl-tRNA synthetase YP_005688090.1 1835747 D 637887 CDS YP_005688091.1 385778926 12421308 complement(1837565..1838254) 1 NC_017304.1 KEGG: amt:Amet_1388 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1838254 12421308 Clo1313_1579 Clostridium thermocellum DSM 1313 anaerobic ribonucleoside-triphosphate reductase activating protein YP_005688091.1 1837565 R 637887 CDS YP_005688092.1 385778927 12421309 complement(1838251..1840341) 1 NC_017304.1 manually curated; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: ate:Athe_0548 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase 1840341 12421309 Clo1313_1580 Clostridium thermocellum DSM 1313 anaerobic ribonucleoside-triphosphate reductase YP_005688092.1 1838251 R 637887 CDS YP_005688093.1 385778928 12421310 complement(1840926..1843340) 1 NC_017304.1 PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: sat:SYN_02703 5-methyltetrahydrofolate--homocysteine methyltransferase; homocysteine S-methyltransferase 1843340 12421310 Clo1313_1581 Clostridium thermocellum DSM 1313 homocysteine S-methyltransferase YP_005688093.1 1840926 R 637887 CDS YP_005688094.1 385778929 12421311 complement(1843333..1843977) 1 NC_017304.1 KEGG: sat:SYN_00095 putative cytoplasmic protein; manually curated; PFAM: Vitamin B12 dependent methionine synthase activation region; Vitamin B12 dependent methionine synthase activation subunit 1843977 12421311 Clo1313_1582 Clostridium thermocellum DSM 1313 Vitamin B12 dependent methionine synthase activation subunit YP_005688094.1 1843333 R 637887 CDS YP_005688095.1 385778930 12421312 complement(1844072..1845145) 1 NC_017304.1 KEGG: tjr:TherJR_2224 uncharacterized membrane protein; membrane protein 1845145 12421312 Clo1313_1583 Clostridium thermocellum DSM 1313 membrane protein YP_005688095.1 1844072 R 637887 CDS YP_005688096.1 385778931 12421313 1845369..1845554 1 NC_017304.1 KEGG: cbl:CLK_0225 hypothetical protein; hypothetical protein 1845554 12421313 Clo1313_1584 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688096.1 1845369 D 637887 CDS YP_005688097.1 385778932 12421314 1845571..1845813 1 NC_017304.1 PFAM: Coat F domain protein; KEGG: swo:Swol_1896 hypothetical protein; Coat F domain-containing protein 1845813 12421314 Clo1313_1585 Clostridium thermocellum DSM 1313 Coat F domain-containing protein YP_005688097.1 1845571 D 637887 CDS YP_005688098.1 385778933 12421315 complement(1845921..1846106) 1 NC_017304.1 manually curated; KEGG: tet:TTHERM_00011270 hypothetical protein; hypothetical protein 1846106 12421315 Clo1313_1586 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688098.1 1845921 R 637887 CDS YP_005688099.1 385778934 12421316 complement(1846372..1848120) 1 NC_017304.1 KEGG: dma:DMR_27390 hypothetical protein; manually curated; PFAM: Dockerin type 1; Dockerin type 1 1848120 12421316 Clo1313_1587 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688099.1 1846372 R 637887 CDS YP_005688100.1 385778935 12421317 1848339..1849541 1 NC_017304.1 PFAM: glycoside hydrolase family 13 domain protein; KEGG: cbt:CLH_0520 hypothetical protein; glycoside hydrolase 1849541 12421317 Clo1313_1588 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688100.1 1848339 D 637887 CDS YP_005688101.1 385778936 12421318 1849747..1854426 1 NC_017304.1 KEGG: cac:CA_C0039 DNA segregation ATP-ase FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; Forkhead-associated protein; SMART: Forkhead-associated protein; AAA ATPase; FHA domain-containing protein 1854426 12421318 Clo1313_1589 Clostridium thermocellum DSM 1313 FHA domain-containing protein YP_005688101.1 1849747 D 637887 CDS YP_005688102.1 385778937 12421319 1854563..1854865 1 NC_017304.1 KEGG: bsu:BSU31910 hypothetical protein; hypothetical protein 1854865 12421319 Clo1313_1590 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688102.1 1854563 D 637887 CDS YP_005688103.1 385778938 12421320 1855017..1855265 1 NC_017304.1 KEGG: cac:CA_C0409 hypothetical protein; hypothetical protein 1855265 12421320 Clo1313_1591 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688103.1 1855017 D 637887 CDS YP_005688104.1 385778939 12421321 1855401..1856231 1 NC_017304.1 KEGG: bsu:BSU15760 phosphorylated protein phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase 1856231 12421321 Clo1313_1592 Clostridium thermocellum DSM 1313 protein serine/threonine phosphatase YP_005688104.1 1855401 D 637887 CDS YP_005688105.1 385778940 12421322 1856354..1858441 1 NC_017304.1 KEGG: cac:CA_C3039 hypothetical protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 1858441 12421322 Clo1313_1593 Clostridium thermocellum DSM 1313 serine/threonine protein kinase YP_005688105.1 1856354 D 637887 CDS YP_005688106.1 385778941 12421323 complement(1858472..1858957) 1 NC_017304.1 KEGG: ddc:Dd586_1282 hypothetical protein; hypothetical protein 1858957 12421323 Clo1313_1594 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688106.1 1858472 R 637887 CDS YP_005688107.1 385778942 12421324 complement(1858976..1859578) 1 NC_017304.1 KEGG: esi:Exig_1766 glycosyl transferase family protein; hypothetical protein 1859578 12421324 Clo1313_1595 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688107.1 1858976 R 637887 CDS YP_005688108.1 385778943 12421325 complement(1859636..1859851) 1 NC_017304.1 KEGG: kol:Kole_1147 hypothetical protein; hypothetical protein 1859851 12421325 Clo1313_1596 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688108.1 1859636 R 637887 CDS YP_005688109.1 385778944 12421326 complement(1859913..1860797) 1 NC_017304.1 KEGG: apa:APP7_0591 tight adherence protein C; hypothetical protein 1860797 12421326 Clo1313_1597 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688109.1 1859913 R 637887 CDS YP_005688110.1 385778945 12421327 complement(1860791..1861768) 1 NC_017304.1 KEGG: atc:AGR_L_552 probable ABC transporter ATP-binding protein Y4GM; hypothetical protein 1861768 12421327 Clo1313_1598 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688110.1 1860791 R 637887 CDS YP_005688111.1 385778946 12421328 complement(1861758..1863203) 1 NC_017304.1 PFAM: type II secretion system protein E; KEGG: chl:Chy400_0548 type II secretion system protein E; type II secretion system protein E 1863203 12421328 Clo1313_1599 Clostridium thermocellum DSM 1313 type II secretion system protein E YP_005688111.1 1861758 R 637887 CDS YP_005688112.1 385778947 12421329 complement(1863225..1864061) 1 NC_017304.1 KEGG: aau:AAur_3162 putative cell surface polysaccharide biosynthesis; hypothetical protein 1864061 12421329 Clo1313_1600 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688112.1 1863225 R 637887 CDS YP_005688113.1 385778948 12421330 complement(1864031..1864906) 1 NC_017304.1 KEGG: csc:Csac_2625 SAF domain-containing protein; hypothetical protein 1864906 12421330 Clo1313_1601 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688113.1 1864031 R 637887 CDS YP_005688114.1 385778949 12421331 complement(1865095..1866507) 1 NC_017304.1 KEGG: hps:HPSH_01720 cell division inhibitor (MinD); hypothetical protein 1866507 12421331 Clo1313_1602 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688114.1 1865095 R 637887 CDS YP_005688115.1 385778950 12421332 complement(1866721..1868853) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: ate:Athe_1867 glycoside hydrolase family 48; glycoside hydrolase 1868853 12421332 Clo1313_1603 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688115.1 1866721 R 637887 CDS YP_005688116.1 385778951 12421333 complement(1869417..1874222) 1 NC_017304.1 KEGG: cce:Ccel_0429 PKD domain containing protein; PFAM: glycoside hydrolase family 9; Dockerin type 1; PKD domain containing protein; SMART: PKD domain containing protein; glycoside hydrolase 1874222 12421333 Clo1313_1604 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688116.1 1869417 R 637887 CDS YP_005688117.1 385778952 12421334 complement(1874903..1875541) 1 NC_017304.1 TIGRFAM: sporulation protein, yteA family; KEGG: cce:Ccel_1852 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 1875541 12421334 Clo1313_1605 Clostridium thermocellum DSM 1313 TraR/DksA family transcriptional regulator YP_005688117.1 1874903 R 637887 CDS YP_005688118.1 385778953 12421335 1875811..1876617 1 NC_017304.1 KEGG: csc:Csac_1924 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; methylthioadenosine phosphorylase 1876617 12421335 Clo1313_1606 Clostridium thermocellum DSM 1313 methylthioadenosine phosphorylase YP_005688118.1 1875811 D 637887 CDS YP_005688119.1 385778954 12421336 1876662..1877690 1 NC_017304.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: gsu:GSU3379 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 1877690 12421336 Clo1313_1607 Clostridium thermocellum DSM 1313 translation initiation factor, aIF-2BI family YP_005688119.1 1876662 D 637887 CDS YP_005688120.1 385778955 12421337 complement(1877767..1878159) 1 NC_017304.1 KEGG: ckr:CKR_0985 hypothetical protein; PFAM: iron dependent repressor; SMART: iron dependent repressor; DtxR family iron (metal) dependent repressor 1878159 12421337 Clo1313_1608 Clostridium thermocellum DSM 1313 DtxR family iron (metal) dependent repressor YP_005688120.1 1877767 R 637887 CDS YP_005688121.1 385778956 12421338 1878480..1878701 1 NC_017304.1 PFAM: FeoA family protein; KEGG: cbe:Cbei_4197 FeoA family protein; FeoA family protein 1878701 12421338 Clo1313_1609 Clostridium thermocellum DSM 1313 FeoA family protein YP_005688121.1 1878480 D 637887 CDS YP_005688122.1 385778957 12421339 1878775..1880940 1 NC_017304.1 KEGG: ckr:CKR_1488 hypothetical protein; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; ferrous iron transport protein B 1880940 12421339 Clo1313_1610 Clostridium thermocellum DSM 1313 ferrous iron transport protein B YP_005688122.1 1878775 D 637887 CDS YP_005688123.1 385778958 12421340 1880937..1881101 1 NC_017304.1 KEGG: cdl:CDR20291_1329 hypothetical protein; hypothetical protein 1881101 12421340 Clo1313_1611 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688123.1 1880937 D 637887 CDS YP_005688124.1 385778959 12421341 complement(1881261..1882559) 1 NC_017304.1 KEGG: cce:Ccel_1936 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase 1882559 12421341 Clo1313_1612 Clostridium thermocellum DSM 1313 AAA ATPase YP_005688124.1 1881261 R 637887 CDS YP_005688125.1 385778960 12421342 complement(1882593..1883024) 1 NC_017304.1 PFAM: amino acid-binding ACT domain protein; KEGG: csc:Csac_2050 amino acid-binding ACT domain-containing protein; amino acid-binding ACT protein 1883024 12421342 Clo1313_1613 Clostridium thermocellum DSM 1313 amino acid-binding ACT protein YP_005688125.1 1882593 R 637887 CDS YP_005688126.1 385778961 12421343 complement(1883079..1884380) 1 NC_017304.1 KEGG: cce:Ccel_1218 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase 1884380 12421343 Clo1313_1614 Clostridium thermocellum DSM 1313 phenylacetate--CoA ligase YP_005688126.1 1883079 R 637887 CDS YP_005688127.1 385778962 12421344 complement(1884490..1885065) 1 NC_017304.1 KEGG: cce:Ccel_0668 indolepyruvate oxidoreductase subunit beta; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; indolepyruvate ferredoxin oxidoreductase subunit beta 1885065 12421344 Clo1313_1615 Clostridium thermocellum DSM 1313 indolepyruvate ferredoxin oxidoreductase subunit beta YP_005688127.1 1884490 R 637887 CDS YP_005688128.1 385778963 12421345 complement(1885068..1886804) 1 NC_017304.1 KEGG: cce:Ccel_0667 indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; indolepyruvate ferredoxin oxidoreductase subunit alpha 1886804 12421345 Clo1313_1616 Clostridium thermocellum DSM 1313 indolepyruvate ferredoxin oxidoreductase subunit alpha YP_005688128.1 1885068 R 637887 CDS YP_005688129.1 385778964 12421346 complement(1887110..1888621) 1 NC_017304.1 KEGG: tjr:TherJR_2929 SSS sodium solute transporter superfamily; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS sodium solute transporter superfamily protein 1888621 12421346 Clo1313_1617 Clostridium thermocellum DSM 1313 SSS sodium solute transporter superfamily protein YP_005688129.1 1887110 R 637887 CDS YP_005688130.1 385778965 12421347 complement(1888778..1890403) 1 NC_017304.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: cce:Ccel_1759 RNA-metabolising metallo-beta-lactamase; RNA-metabolising metallo-beta-lactamase 1890403 12421347 Clo1313_1618 Clostridium thermocellum DSM 1313 RNA-metabolising metallo-beta-lactamase YP_005688130.1 1888778 R 637887 CDS YP_005688131.1 385778966 12421348 complement(1890514..1891581) 1 NC_017304.1 KEGG: cac:CA_C3031 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 1891581 12421348 Clo1313_1619 Clostridium thermocellum DSM 1313 histidinol-phosphate aminotransferase YP_005688131.1 1890514 R 637887 CDS YP_005688132.1 385778967 12421349 complement(1891844..1892821) 1 NC_017304.1 PFAM: peptidase M42 family protein; KEGG: cce:Ccel_1760 peptidase M42 family protein; peptidase M42 family protein 1892821 12421349 Clo1313_1620 Clostridium thermocellum DSM 1313 peptidase M42 family protein YP_005688132.1 1891844 R 637887 CDS YP_005688133.1 385778968 12421350 complement(1892868..1893917) 1 NC_017304.1 KEGG: cce:Ccel_1761 peptidase M42 family protein; PFAM: peptidase M42 family protein; cellulase 1893917 12421350 Clo1313_1621 Clostridium thermocellum DSM 1313 cellulase YP_005688133.1 1892868 R 637887 CDS YP_005688134.1 385778969 12421351 complement(1893911..1894960) 1 NC_017304.1 PFAM: peptidase M42 family protein; KEGG: cce:Ccel_1762 peptidase M42 family protein; peptidase M42 family protein 1894960 12421351 Clo1313_1622 Clostridium thermocellum DSM 1313 peptidase M42 family protein YP_005688134.1 1893911 R 637887 CDS YP_005688135.1 385778970 12421352 complement(1895151..1897451) 1 NC_017304.1 KEGG: cce:Ccel_1955 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 1897451 12421352 Clo1313_1623 Clostridium thermocellum DSM 1313 DNA internalization-related competence protein ComEC/Rec2 YP_005688135.1 1895151 R 637887 CDS YP_005688136.1 385778971 12421353 complement(1897567..1898679) 1 NC_017304.1 KEGG: tex:Teth514_2151 NLP/P60 protein; PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein; SH3 domain-containing protein; NLP/P60 protein 1898679 12421353 Clo1313_1624 Clostridium thermocellum DSM 1313 NLP/P60 protein YP_005688136.1 1897567 R 637887 CDS YP_005688137.1 385778972 12421354 complement(1898683..1898940) 1 NC_017304.1 KEGG: ame:725439 similar to CG31974-PA; hypothetical protein 1898940 12421354 Clo1313_1625 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688137.1 1898683 R 637887 CDS YP_005688138.1 385778973 12421355 complement(1898965..1899489) 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cce:Ccel_1957 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1899489 12421355 Clo1313_1626 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005688138.1 1898965 R 637887 CDS YP_005688139.1 385778974 12421356 complement(1899970..1901268) 1 NC_017304.1 KEGG: ckr:CKR_1649 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 1901268 12421356 Clo1313_1627 Clostridium thermocellum DSM 1313 thiamine biosynthesis protein ThiC YP_005688139.1 1899970 R 637887 CDS YP_005688140.1 385778975 12421357 complement(1901270..1902340) 1 NC_017304.1 KEGG: pth:PTH_0643 thiamine monophosphate synthase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1902340 12421357 Clo1313_1628 Clostridium thermocellum DSM 1313 thiamine-phosphate pyrophosphorylase YP_005688140.1 1901270 R 637887 CDS YP_005688141.1 385778976 12421358 complement(1902340..1902984) 1 NC_017304.1 KEGG: pth:PTH_0642 thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein; thiamine biosynthesis protein ThiF 1902984 12421358 Clo1313_1629 Clostridium thermocellum DSM 1313 thiamine biosynthesis protein ThiF YP_005688141.1 1902340 R 637887 CDS YP_005688142.1 385778977 12421359 complement(1903061..1904170) 1 NC_017304.1 KEGG: dae:Dtox_1681 thiazole biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; thiazole biosynthesis protein ThiH 1904170 12421359 Clo1313_1630 Clostridium thermocellum DSM 1313 thiazole biosynthesis protein ThiH YP_005688142.1 1903061 R 637887 CDS YP_005688143.1 385778978 12421360 complement(1904299..1905066) 1 NC_017304.1 PFAM: thiazole biosynthesis family protein; KEGG: pth:PTH_0640 hypothetical protein; thiazole biosynthesis family protein 1905066 12421360 Clo1313_1631 Clostridium thermocellum DSM 1313 thiazole biosynthesis family protein YP_005688143.1 1904299 R 637887 CDS YP_005688144.1 385778979 12421361 complement(1905069..1905269) 1 NC_017304.1 KEGG: pth:PTH_0639 sulfur transfer protein; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 1905269 12421361 Clo1313_1632 Clostridium thermocellum DSM 1313 thiamine biosynthesis protein ThiS YP_005688144.1 1905069 R 637887 CDS YP_005688145.1 385778980 12421362 complement(1905534..1906157) 1 NC_017304.1 KEGG: cce:Ccel_0898 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC 1906157 12421362 Clo1313_1633 Clostridium thermocellum DSM 1313 ribosome biogenesis GTP-binding protein YsxC YP_005688145.1 1905534 R 637887 CDS YP_005688146.1 385778981 12421363 complement(1906230..1907297) 1 NC_017304.1 KEGG: cdl:CDR20291_1894 hypothetical protein; hypothetical protein 1907297 12421363 Clo1313_1634 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688146.1 1906230 R 637887 CDS YP_005688147.1 385778982 12421364 1907499..1907627 1 NC_017304.1 hypothetical protein 1907627 12421364 Clo1313_1635 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688147.1 1907499 D 637887 CDS YP_005688148.1 385778983 12421365 1907872..1908072 1 NC_017304.1 KEGG: zmn:Za10_0245 heat shock protein DnaJ domain protein; hypothetical protein 1908072 12421365 Clo1313_1636 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688148.1 1907872 D 637887 CDS YP_005688149.1 385778984 12421366 complement(1908194..1909237) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0975 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 1909237 12421366 Clo1313_1637 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688149.1 1908194 R 637887 CDS YP_005688150.1 385778985 12421367 complement(1909515..1910177) 1 NC_017304.1 PFAM: Methyltransferase type 11; KEGG: dth:DICTH_0193 methyltransferase, putative; type 11 methyltransferase 1910177 12421367 Clo1313_1638 Clostridium thermocellum DSM 1313 type 11 methyltransferase YP_005688150.1 1909515 R 637887 CDS YP_005688151.1 385778986 12421371 complement(1916708..1917163) 1 NC_017304.1 manually curated; KEGG: geo:Geob_0720 recombinase; hypothetical protein 1917163 12421371 Clo1313_1642 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688151.1 1916708 R 637887 CDS YP_005688152.1 385778987 12421372 complement(1917245..1918396) 1 NC_017304.1 manually curated; PFAM: Resolvase domain; Recombinase; KEGG: geo:Geob_0720 recombinase; SMART: Resolvase domain; resolvase domain-containing protein 1918396 12421372 Clo1313_1643 Clostridium thermocellum DSM 1313 resolvase domain-containing protein YP_005688152.1 1917245 R 637887 CDS YP_005688153.1 385778988 12421373 complement(1918472..1918804) 1 NC_017304.1 manually curated; KEGG: cyb:CYB_2324 hypothetical protein; hypothetical protein 1918804 12421373 Clo1313_1644 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688153.1 1918472 R 637887 CDS YP_005688154.1 385778989 12421374 complement(1919053..1921191) 1 NC_017304.1 manually curated; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: nth:Nther_1523 DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 1921191 12421374 Clo1313_1645 Clostridium thermocellum DSM 1313 DEAD/DEAH box helicase YP_005688154.1 1919053 R 637887 CDS YP_005688155.1 385778990 12421376 complement(1922530..1924374) 1 NC_017304.1 manually curated; KEGG: nth:Nther_1525 hypothetical protein; hypothetical protein 1924374 12421376 Clo1313_1647 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688155.1 1922530 R 637887 CDS YP_005688156.1 385778991 12421377 complement(1924535..1925203) 1 NC_017304.1 KEGG: glo:Glov_2327 resolvase domain; PFAM: Resolvase domain; SMART: Resolvase domain; resolvase domain-containing protein 1925203 12421377 Clo1313_1648 Clostridium thermocellum DSM 1313 resolvase domain-containing protein YP_005688156.1 1924535 R 637887 CDS YP_005688157.1 385778992 12421378 complement(1925487..1926263) 1 NC_017304.1 KEGG: pno:SNOG_14271 hypothetical protein; hypothetical protein 1926263 12421378 Clo1313_1649 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688157.1 1925487 R 637887 CDS YP_005688158.1 385778993 12421379 complement(1926288..1926494) 1 NC_017304.1 KEGG: tjr:TherJR_0147 DNA binding domain protein, excisionase family; manually curated; TIGRFAM: DNA binding domain protein, excisionase family; excisionase family DNA binding domain-containing protein 1926494 12421379 Clo1313_1650 Clostridium thermocellum DSM 1313 excisionase family DNA binding domain-containing protein YP_005688158.1 1926288 R 637887 CDS YP_005688159.1 385778994 12421380 join(1927600..1927878,1927877..1928752) 1 NC_017304.1 KEGG: cce:Ccel_1666 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1928752 12421380 Clo1313_1651 Clostridium thermocellum DSM 1313 transposase IS3/IS911 family protein YP_005688159.1 1927600 D 637887 CDS YP_005688160.1 385778995 12421381 complement(1928941..1929762) 1 NC_017304.1 manually curated; KEGG: dal:Dalk_4181 hypothetical protein; hypothetical protein 1929762 12421381 Clo1313_1652 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688160.1 1928941 R 637887 CDS YP_005688161.1 385778996 12421383 complement(1933986..1934276) 1 NC_017304.1 PFAM: protein of unknown function DUF503; KEGG: amt:Amet_3629 hypothetical protein; hypothetical protein 1934276 12421383 Clo1313_1653 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688161.1 1933986 R 637887 CDS YP_005688162.1 385778997 12421384 1934406..1935590 1 NC_017304.1 KEGG: psb:Psyr_1912 response regulator receiver:stage II sporulation E; PFAM: Stage II sporulation protein E; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; response regulator receiver protein 1935590 12421384 Clo1313_1654 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005688162.1 1934406 D 637887 CDS YP_005688163.1 385778998 12421385 1935618..1937381 1 NC_017304.1 SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; manually curated; KEGG: dal:Dalk_2282 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS/PAC sensor signal transduction histidine kinase 1937381 12421385 Clo1313_1655 Clostridium thermocellum DSM 1313 PAS/PAC sensor signal transduction histidine kinase YP_005688163.1 1935618 D 637887 CDS YP_005688164.1 385778999 12421386 1937638..1939404 1 NC_017304.1 KEGG: cce:Ccel_1964 fibronectin-binding A domain protein; manually curated; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; fibronectin-binding A domain-containing protein 1939404 12421386 Clo1313_1656 Clostridium thermocellum DSM 1313 fibronectin-binding A domain-containing protein YP_005688164.1 1937638 D 637887 CDS YP_005688165.1 385779000 12421387 1939418..1940611 1 NC_017304.1 PFAM: aminotransferase class I and II; KEGG: cno:NT01CX_0284 aspartate aminotransferase; class I and II aminotransferase 1940611 12421387 Clo1313_1657 Clostridium thermocellum DSM 1313 class I and II aminotransferase YP_005688165.1 1939418 D 637887 CDS YP_005688166.1 385779001 12421388 complement(1940678..1941199) 1 NC_017304.1 KEGG: cdl:CDR20291_0767 putative reductase; manually curated; PFAM: nitroreductase; nitroreductase 1941199 12421388 Clo1313_1658 Clostridium thermocellum DSM 1313 nitroreductase YP_005688166.1 1940678 R 637887 CDS YP_005688167.1 385779002 12421389 1941753..1943963 1 NC_017304.1 KEGG: ate:Athe_1867 glycoside hydrolase family 48; manually curated; PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; glycoside hydrolase 1943963 12421389 Clo1313_1659 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688167.1 1941753 D 637887 CDS YP_005688168.1 385779003 12421390 complement(1944102..1944740) 1 NC_017304.1 KEGG: cce:Ccel_1538 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; thiamine pyrophosphokinase 1944740 12421390 Clo1313_1660 Clostridium thermocellum DSM 1313 thiamine pyrophosphokinase YP_005688168.1 1944102 R 637887 CDS YP_005688169.1 385779004 12421391 complement(1944753..1945415) 1 NC_017304.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: amt:Amet_2777 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1945415 12421391 Clo1313_1661 Clostridium thermocellum DSM 1313 ribulose-phosphate 3-epimerase YP_005688169.1 1944753 R 637887 CDS YP_005688170.1 385779005 12421392 complement(1945574..1946458) 1 NC_017304.1 KEGG: cce:Ccel_1536 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 1946458 12421392 Clo1313_1662 Clostridium thermocellum DSM 1313 ribosome small subunit-dependent GTPase A YP_005688170.1 1945574 R 637887 CDS YP_005688171.1 385779006 12421393 complement(1946478..1948589) 1 NC_017304.1 KEGG: cce:Ccel_1535 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; serine/threonine protein kinase with PASTA sensor(s) 1948589 12421393 Clo1313_1663 Clostridium thermocellum DSM 1313 serine/threonine protein kinase with PASTA sensor(s) YP_005688171.1 1946478 R 637887 CDS YP_005688172.1 385779007 12421394 complement(1948660..1949397) 1 NC_017304.1 KEGG: cce:Ccel_1534 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase 1949397 12421394 Clo1313_1664 Clostridium thermocellum DSM 1313 protein serine/threonine phosphatase YP_005688172.1 1948660 R 637887 CDS YP_005688173.1 385779008 12421395 complement(1949462..1950511) 1 NC_017304.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: cce:Ccel_1533 ribosomal RNA large subunit methyltransferase N; SMART: Elongator protein 3/MiaB/NifB; radical SAM enzyme, Cfr family 1950511 12421395 Clo1313_1665 Clostridium thermocellum DSM 1313 radical SAM enzyme, Cfr family YP_005688173.1 1949462 R 637887 CDS YP_005688174.1 385779009 12421396 complement(1950513..1951880) 1 NC_017304.1 KEGG: cce:Ccel_1532 sun protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein 1951880 12421396 Clo1313_1666 Clostridium thermocellum DSM 1313 sun protein YP_005688174.1 1950513 R 637887 CDS YP_005688175.1 385779010 12421397 complement(1951880..1952563) 1 NC_017304.1 PFAM: peptidase membrane zinc metallopeptidase; KEGG: cbe:Cbei_3038 peptidase, membrane zinc metallopeptidase, putative; peptidase membrane zinc metallopeptidase 1952563 12421397 Clo1313_1667 Clostridium thermocellum DSM 1313 peptidase membrane zinc metallopeptidase YP_005688175.1 1951880 R 637887 CDS YP_005688176.1 385779011 12421398 complement(1952580..1953350) 1 NC_017304.1 PFAM: protein of unknown function DUF116; KEGG: cce:Ccel_1530 protein of unknown function DUF116; hypothetical protein 1953350 12421398 Clo1313_1668 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688176.1 1952580 R 637887 CDS YP_005688177.1 385779012 12421399 complement(1953325..1954302) 1 NC_017304.1 KEGG: cce:Ccel_1529 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 1954302 12421399 Clo1313_1669 Clostridium thermocellum DSM 1313 methionyl-tRNA formyltransferase YP_005688177.1 1953325 R 637887 CDS YP_005688178.1 385779013 12421400 complement(1954319..1954831) 1 NC_017304.1 KEGG: tpd:Teth39_1320 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 1954831 12421400 Clo1313_1670 Clostridium thermocellum DSM 1313 peptide deformylase YP_005688178.1 1954319 R 637887 CDS YP_005688179.1 385779014 12421401 complement(1954878..1957325) 1 NC_017304.1 TIGRFAM: primosomal protein N'; PFAM: type III restriction protein res subunit; helicase domain protein; KEGG: cce:Ccel_1527 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 1957325 12421401 Clo1313_1671 Clostridium thermocellum DSM 1313 primosomal protein N' YP_005688179.1 1954878 R 637887 CDS YP_005688180.1 385779015 12421402 complement(1957624..1958037) 1 NC_017304.1 KEGG: cno:NT01CX_1363 hypothetical protein; hypothetical protein 1958037 12421402 Clo1313_1672 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688180.1 1957624 R 637887 CDS YP_005688181.1 385779016 12421403 complement(1958123..1959079) 1 NC_017304.1 PFAM: Polyprenyl synthetase; KEGG: cce:Ccel_1526 polyprenyl synthetase; polyprenyl synthetase 1959079 12421403 Clo1313_1673 Clostridium thermocellum DSM 1313 polyprenyl synthetase YP_005688181.1 1958123 R 637887 CDS YP_005688182.1 385779017 12421404 complement(1959108..1959620) 1 NC_017304.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: cce:Ccel_1525 heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component I 1959620 12421404 Clo1313_1674 Clostridium thermocellum DSM 1313 heptaprenyl diphosphate synthase component I YP_005688182.1 1959108 R 637887 CDS YP_005688183.1 385779018 12421405 complement(1959701..1960081) 1 NC_017304.1 PFAM: protein of unknown function DUF1312; KEGG: clj:CLJU_c11430 hypothetical protein; hypothetical protein 1960081 12421405 Clo1313_1675 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688183.1 1959701 R 637887 CDS YP_005688184.1 385779019 12421406 complement(1960065..1961156) 1 NC_017304.1 PFAM: ApbE family lipoprotein; KEGG: dhd:Dhaf_1499 ApbE family lipoprotein; ApbE family lipoprotein 1961156 12421406 Clo1313_1676 Clostridium thermocellum DSM 1313 ApbE family lipoprotein YP_005688184.1 1960065 R 637887 CDS YP_005688185.1 385779020 12421407 1961527..1963302 1 NC_017304.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; TQO small subunit DoxD domain-containing protein; KEGG: tte:TTE2486 NADH dehydrogenase, FAD-containing subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1963302 12421407 Clo1313_1677 Clostridium thermocellum DSM 1313 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005688185.1 1961527 D 637887 CDS YP_005688186.1 385779021 12421408 complement(1963422..1964138) 1 NC_017304.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cce:Ccel_1522 single-stranded DNA-binding protein; ssDNA-binding protein 1964138 12421408 Clo1313_1678 Clostridium thermocellum DSM 1313 ssDNA-binding protein YP_005688186.1 1963422 R 637887 CDS YP_005688187.1 385779022 12421409 complement(1964491..1965225) 1 NC_017304.1 PFAM: Mur ligase middle domain protein; KEGG: aoe:Clos_2017 UDP-N-acetylmuramyl-tripeptide synthetase; Mur ligase middle domain-containing protein 1965225 12421409 Clo1313_1679 Clostridium thermocellum DSM 1313 Mur ligase middle domain-containing protein YP_005688187.1 1964491 R 637887 CDS YP_005688188.1 385779023 12421410 complement(1965253..1966023) 1 NC_017304.1 PFAM: polysaccharide deacetylase; KEGG: cce:Ccel_0567 polysaccharide deacetylase; polysaccharide deacetylase 1966023 12421410 Clo1313_1680 Clostridium thermocellum DSM 1313 polysaccharide deacetylase YP_005688188.1 1965253 R 637887 CDS YP_005688189.1 385779024 12421411 1966330..1968171 1 NC_017304.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: hmo:HM1_0486 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase 1968171 12421411 Clo1313_1681 Clostridium thermocellum DSM 1313 asparagine synthase YP_005688189.1 1966330 D 637887 CDS YP_005688190.1 385779025 12421412 complement(1968234..1969475) 1 NC_017304.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: ate:Athe_0639 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1969475 12421412 Clo1313_1682 Clostridium thermocellum DSM 1313 PpiC-type peptidyl-prolyl cis-trans isomerase YP_005688190.1 1968234 R 637887 CDS YP_005688191.1 385779026 12421413 complement(1969758..1973528) 1 NC_017304.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: tjr:TherJR_0822 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase 1973528 12421413 Clo1313_1683 Clostridium thermocellum DSM 1313 phosphoribosylformylglycinamidine synthase YP_005688191.1 1969758 R 637887 CDS YP_005688192.1 385779027 12421414 1973648..1974547 1 NC_017304.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cce:Ccel_0498 transcriptional regulator, LysR family; LysR family transcriptional regulator 1974547 12421414 Clo1313_1684 Clostridium thermocellum DSM 1313 LysR family transcriptional regulator YP_005688192.1 1973648 D 637887 CDS YP_005688193.1 385779028 12421415 1974700..1975251 1 NC_017304.1 KEGG: tjr:TherJR_1682 transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin 1975251 12421415 Clo1313_1685 Clostridium thermocellum DSM 1313 cupin YP_005688193.1 1974700 D 637887 CDS YP_005688194.1 385779029 12421416 1975267..1976931 1 NC_017304.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tjr:TherJR_1681 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1976931 12421416 Clo1313_1686 Clostridium thermocellum DSM 1313 AMP-dependent synthetase and ligase YP_005688194.1 1975267 D 637887 CDS YP_005688195.1 385779030 12421417 complement(1977105..1979009) 1 NC_017304.1 PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; KEGG: cce:Ccel_0492 heat shock protein 90; Heat shock protein Hsp90-like protein 1979009 12421417 Clo1313_1687 Clostridium thermocellum DSM 1313 Heat shock protein Hsp90-like protein YP_005688195.1 1977105 R 637887 CDS YP_005688196.1 385779031 12421418 complement(1979177..1980031) 1 NC_017304.1 PFAM: ABC-3 protein; KEGG: dhd:Dhaf_0044 ABC-3 protein; ABC-3 protein 1980031 12421418 Clo1313_1688 Clostridium thermocellum DSM 1313 ABC-3 protein YP_005688196.1 1979177 R 637887 CDS YP_005688197.1 385779032 12421419 complement(1980032..1980811) 1 NC_017304.1 KEGG: bpf:BpOF4_13815 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1980811 12421419 Clo1313_1689 Clostridium thermocellum DSM 1313 ABC transporter YP_005688197.1 1980032 R 637887 CDS YP_005688198.1 385779033 12421420 complement(1980837..1981793) 1 NC_017304.1 PFAM: periplasmic solute binding protein; KEGG: dhd:Dhaf_0042 periplasmic solute binding protein; periplasmic solute binding protein 1981793 12421420 Clo1313_1690 Clostridium thermocellum DSM 1313 periplasmic solute binding protein YP_005688198.1 1980837 R 637887 CDS YP_005688199.1 385779034 12421421 complement(1981969..1982388) 1 NC_017304.1 PFAM: ferric-uptake regulator; KEGG: fma:FMG_0579 FUR family transcriptional regulator; ferric uptake regulator family protein 1982388 12421421 Clo1313_1691 Clostridium thermocellum DSM 1313 ferric uptake regulator family protein YP_005688199.1 1981969 R 637887 CDS YP_005688200.1 385779035 12421422 complement(1982431..1982859) 1 NC_017304.1 PFAM: peptidase A24A prepilin type IV; KEGG: tjr:TherJR_2433 peptidase A24A prepilin type IV; peptidase A24A prepilin type IV 1982859 12421422 Clo1313_1692 Clostridium thermocellum DSM 1313 peptidase A24A prepilin type IV YP_005688200.1 1982431 R 637887 CDS YP_005688201.1 385779036 12421423 complement(1982965..1983840) 1 NC_017304.1 KEGG: cac:CA_C0407 PP2C phosphatase family protein; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase 1983840 12421423 Clo1313_1693 Clostridium thermocellum DSM 1313 protein serine/threonine phosphatase YP_005688201.1 1982965 R 637887 CDS YP_005688202.1 385779037 12421424 complement(1984035..1986254) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: ate:Athe_1867 glycoside hydrolase family 48; glycoside hydrolase 1986254 12421424 Clo1313_1694 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688202.1 1984035 R 637887 CDS YP_005688203.1 385779038 12421425 complement(1986693..1987424) 1 NC_017304.1 PFAM: protein of unknown function DUF45; KEGG: cce:Ccel_2307 protein of unknown function DUF45; hypothetical protein 1987424 12421425 Clo1313_1695 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688203.1 1986693 R 637887 CDS YP_005688204.1 385779039 12421426 complement(1987457..1988650) 1 NC_017304.1 PFAM: peptidase M24; creatinase; KEGG: mba:Mbar_A0649 Xaa-Pro aminopeptidase; peptidase M24 1988650 12421426 Clo1313_1696 Clostridium thermocellum DSM 1313 peptidase M24 YP_005688204.1 1987457 R 637887 CDS YP_005688205.1 385779040 12421427 complement(1988849..1991455) 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: cpy:Cphy_2079 hypothetical protein; hypothetical protein 1991455 12421427 Clo1313_1697 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688205.1 1988849 R 637887 CDS YP_005688206.1 385779041 12421428 complement(1991452..1992135) 1 NC_017304.1 KEGG: cpy:Cphy_2078 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1992135 12421428 Clo1313_1698 Clostridium thermocellum DSM 1313 ABC transporter YP_005688206.1 1991452 R 637887 CDS YP_005688207.1 385779042 12421429 complement(1992244..1993260) 1 NC_017304.1 KEGG: cpy:Cphy_2077 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1993260 12421429 Clo1313_1699 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005688207.1 1992244 R 637887 CDS YP_005688208.1 385779043 12421430 complement(1993253..1993924) 1 NC_017304.1 KEGG: cpy:Cphy_2076 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 1993924 12421430 Clo1313_1700 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005688208.1 1993253 R 637887 CDS YP_005688209.1 385779044 12421431 complement(1993998..1995689) 1 NC_017304.1 PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: cce:Ccel_2337 glycoside hydrolase family 5; glycoside hydrolase 1995689 12421431 Clo1313_1701 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688209.1 1993998 R 637887 CDS YP_005688210.1 385779045 12421432 complement(1995995..1996267) 1 NC_017304.1 KEGG: amt:Amet_1038 hypothetical protein; hypothetical protein 1996267 12421432 Clo1313_1702 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688210.1 1995995 R 637887 CDS YP_005688211.1 385779046 12421433 complement(1996370..1998553) 1 NC_017304.1 TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter transmembrane region; peptidase C39 bacteriocin processing; ABC transporter related; KEGG: amt:Amet_1032 ABC-type bacteriocin transporter; SMART: AAA ATPase; bacteriocin ABC transporter 1998553 12421433 Clo1313_1703 Clostridium thermocellum DSM 1313 bacteriocin ABC transporter YP_005688211.1 1996370 R 637887 CDS YP_005688212.1 385779047 12421434 complement(1998564..2000096) 1 NC_017304.1 KEGG: amt:Amet_1039 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Elongator protein 3/MiaB/NifB; Tetratricopeptide repeat; radical SAM protein 2000096 12421434 Clo1313_1704 Clostridium thermocellum DSM 1313 radical SAM protein YP_005688212.1 1998564 R 637887 CDS YP_005688213.1 385779048 12421435 complement(2000441..2000932) 1 NC_017304.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tme:Tmel_0900 HAD family hydrolase; haloacid dehalogenase domain-containing protein hydrolase 2000932 12421435 Clo1313_1705 Clostridium thermocellum DSM 1313 haloacid dehalogenase domain-containing protein hydrolase YP_005688213.1 2000441 R 637887 CDS YP_005688214.1 385779049 12421436 complement(2001004..2001774) 1 NC_017304.1 manually curated; KEGG: pyo:PY04630 235 kDa rhoptry protein; hypothetical protein 2001774 12421436 Clo1313_1706 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688214.1 2001004 R 637887 CDS YP_005688215.1 385779050 12421437 complement(2001765..2003306) 1 NC_017304.1 KEGG: dgr:Dgri_GH24579 GH24579 gene product from transcript GH24579-RA; hypothetical protein 2003306 12421437 Clo1313_1707 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688215.1 2001765 R 637887 CDS YP_005688216.1 385779051 12421438 complement(2003508..2004293) 1 NC_017304.1 manually curated; PFAM: Peptidoglycan-binding lysin domain; KEGG: aoe:Clos_1944 peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; Peptidoglycan-binding lysin domain 2004293 12421438 Clo1313_1708 Clostridium thermocellum DSM 1313 Peptidoglycan-binding lysin domain YP_005688216.1 2003508 R 637887 CDS YP_005688217.1 385779052 12421439 complement(2004519..2004914) 1 NC_017304.1 KEGG: bcu:BCAH820_5559 hypothetical protein; hypothetical protein 2004914 12421439 Clo1313_1709 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688217.1 2004519 R 637887 CDS YP_005688218.1 385779053 12421440 complement(2005139..2005615) 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 2005615 12421440 Clo1313_1710 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005688218.1 2005139 R 637887 CDS YP_005688219.1 385779054 12421443 complement(2006179..2007684) 1 NC_017304.1 KEGG: cbe:Cbei_3405 response regulator receiver sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 2007684 12421443 Clo1313_1711 Clostridium thermocellum DSM 1313 histidine kinase YP_005688219.1 2006179 R 637887 CDS YP_005688220.1 385779055 12421444 2007949..2009058 1 NC_017304.1 TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: tte:TTE0252 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 2009058 12421444 Clo1313_1712 Clostridium thermocellum DSM 1313 sodium ion-translocating decarboxylase subunit beta YP_005688220.1 2007949 D 637887 CDS YP_005688221.1 385779056 12421445 2009076..2009237 1 NC_017304.1 KEGG: lcz:LCAZH_1857 hypothetical protein; manually curated; PFAM: sodium pump decarboxylase gamma subunit; sodium pump decarboxylase subunit gamma 2009237 12421445 Clo1313_1713 Clostridium thermocellum DSM 1313 sodium pump decarboxylase subunit gamma YP_005688221.1 2009076 D 637887 CDS YP_005688222.1 385779057 12421446 complement(2009356..2009766) 1 NC_017304.1 KEGG: aac:Aaci_0018 nuclease (SNase domain protein); hypothetical protein 2009766 12421446 Clo1313_1714 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688222.1 2009356 R 637887 CDS YP_005688223.1 385779058 12421447 2010022..2010669 1 NC_017304.1 manually curated; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: pjd:Pjdr2_0758 exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III 2010669 12421447 Clo1313_1715 Clostridium thermocellum DSM 1313 Exonuclease RNase T and DNA polymerase III YP_005688223.1 2010022 D 637887 CDS YP_005688224.1 385779059 12421448 complement(2010689..2011405) 1 NC_017304.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: cce:Ccel_2581 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme 2011405 12421448 Clo1313_1716 Clostridium thermocellum DSM 1313 pyruvate formate-lyase activating enzyme YP_005688224.1 2010689 R 637887 CDS YP_005688225.1 385779060 12421449 complement(2011432..2013660) 1 NC_017304.1 TIGRFAM: formate acetyltransferase; KEGG: cce:Ccel_2582 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase 2013660 12421449 Clo1313_1717 Clostridium thermocellum DSM 1313 formate acetyltransferase YP_005688225.1 2011432 R 637887 CDS YP_005688226.1 385779061 12421450 complement(2014046..2015281) 1 NC_017304.1 KEGG: slp:Slip_0641 capsule synthesis protein, CapA; PFAM: Capsule synthesis protein, CapA; SMART: Capsule synthesis protein, CapA; capsule synthesis protein CapA 2015281 12421450 Clo1313_1718 Clostridium thermocellum DSM 1313 capsule synthesis protein CapA YP_005688226.1 2014046 R 637887 CDS YP_005688227.1 385779062 12421451 complement(2015383..2015934) 1 NC_017304.1 KEGG: ate:Athe_1647 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 2015934 12421451 Clo1313_1719 Clostridium thermocellum DSM 1313 2'-5' RNA ligase YP_005688227.1 2015383 R 637887 CDS YP_005688228.1 385779063 12421452 complement(2016086..2016952) 1 NC_017304.1 KEGG: cce:Ccel_0501 hypothetical protein; hypothetical protein 2016952 12421452 Clo1313_1720 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688228.1 2016086 R 637887 CDS YP_005688229.1 385779064 12421453 complement(2017115..2017744) 1 NC_017304.1 PFAM: aminodeoxychorismate lyase; KEGG: cce:Ccel_2018 hypothetical protein; aminodeoxychorismate lyase 2017744 12421453 Clo1313_1721 Clostridium thermocellum DSM 1313 aminodeoxychorismate lyase YP_005688229.1 2017115 R 637887 CDS YP_005688230.1 385779065 12421454 complement(2017776..2018360) 1 NC_017304.1 KEGG: cce:Ccel_2019 hypothetical protein; hypothetical protein 2018360 12421454 Clo1313_1722 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688230.1 2017776 R 637887 CDS YP_005688231.1 385779066 12421455 complement(2018396..2018707) 1 NC_017304.1 KEGG: cce:Ccel_2020 hypothetical protein; hypothetical protein 2018707 12421455 Clo1313_1723 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688231.1 2018396 R 637887 CDS YP_005688232.1 385779067 12421456 complement(2018734..2020362) 1 NC_017304.1 PFAM: protein of unknown function DUF342; KEGG: cce:Ccel_2021 protein of unknown function DUF342; hypothetical protein 2020362 12421456 Clo1313_1724 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688232.1 2018734 R 637887 CDS YP_005688233.1 385779068 12421457 complement(2020402..2021172) 1 NC_017304.1 KEGG: cce:Ccel_2022 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG 2021172 12421457 Clo1313_1725 Clostridium thermocellum DSM 1313 RNA polymerase sigma 28 subunit FliA/WhiG YP_005688233.1 2020402 R 637887 CDS YP_005688234.1 385779069 12421458 complement(2021225..2021623) 1 NC_017304.1 KEGG: cce:Ccel_2023 hypothetical protein; hypothetical protein 2021623 12421458 Clo1313_1726 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688234.1 2021225 R 637887 CDS YP_005688235.1 385779070 12421459 complement(2021638..2022123) 1 NC_017304.1 PFAM: CheD family protein; KEGG: cce:Ccel_2024 CheD; protein CheD 2022123 12421459 Clo1313_1727 Clostridium thermocellum DSM 1313 protein CheD YP_005688235.1 2021638 R 637887 CDS YP_005688236.1 385779071 12421460 complement(2022123..2022743) 1 NC_017304.1 KEGG: cce:Ccel_2025 CheC, inhibitor of MCP methylation; manually curated; PFAM: CheC domain protein; CheC, inhibitor of MCP methylation 2022743 12421460 Clo1313_1728 Clostridium thermocellum DSM 1313 CheC, inhibitor of MCP methylation YP_005688236.1 2022123 R 637887 CDS YP_005688237.1 385779072 12421461 complement(2022748..2023212) 1 NC_017304.1 KEGG: cce:Ccel_2026 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 2023212 12421461 Clo1313_1729 Clostridium thermocellum DSM 1313 CheW protein YP_005688237.1 2022748 R 637887 CDS YP_005688238.1 385779073 12421462 complement(2023229..2025307) 1 NC_017304.1 KEGG: cce:Ccel_2027 CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase 2025307 12421462 Clo1313_1730 Clostridium thermocellum DSM 1313 CheA signal transduction histidine kinase YP_005688238.1 2023229 R 637887 CDS YP_005688239.1 385779074 12421463 complement(2025307..2026371) 1 NC_017304.1 KEGG: cce:Ccel_2028 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 2026371 12421463 Clo1313_1731 Clostridium thermocellum DSM 1313 response regulator receiver modulated CheB methylesterase YP_005688239.1 2025307 R 637887 CDS YP_005688240.1 385779075 12421464 complement(2026381..2027055) 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: tpd:Teth39_1234 type IV pilus assembly PilZ; type IV pilus assembly PilZ 2027055 12421464 Clo1313_1732 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005688240.1 2026381 R 637887 CDS YP_005688241.1 385779076 12421465 complement(2027098..2028006) 1 NC_017304.1 KEGG: cce:Ccel_2029 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 2028006 12421465 Clo1313_1733 Clostridium thermocellum DSM 1313 cobyrinic acid ac-diamide synthase YP_005688241.1 2027098 R 637887 CDS YP_005688242.1 385779077 12421466 complement(2028007..2029218) 1 NC_017304.1 TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain; KEGG: cce:Ccel_2030 GTP-binding signal recognition particle SRP54 G-domain protein; SMART: AAA ATPase; flagellar biosynthetic protein FlhF 2029218 12421466 Clo1313_1734 Clostridium thermocellum DSM 1313 flagellar biosynthetic protein FlhF YP_005688242.1 2028007 R 637887 CDS YP_005688243.1 385779078 12421467 complement(2029220..2031250) 1 NC_017304.1 manually curated; TIGRFAM: flagellar biosynthesis protein FlhA; KEGG: cce:Ccel_2031 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 2031250 12421467 Clo1313_1735 Clostridium thermocellum DSM 1313 flagellar biosynthesis protein FlhA YP_005688243.1 2029220 R 637887 CDS YP_005688244.1 385779079 12421468 complement(2031291..2032469) 1 NC_017304.1 KEGG: cce:Ccel_2032 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 2032469 12421468 Clo1313_1736 Clostridium thermocellum DSM 1313 flagellar biosynthetic protein FlhB YP_005688244.1 2031291 R 637887 CDS YP_005688245.1 385779080 12421469 complement(2032466..2033251) 1 NC_017304.1 KEGG: cce:Ccel_2033 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 2033251 12421469 Clo1313_1737 Clostridium thermocellum DSM 1313 flagellar biosynthetic protein FliR YP_005688245.1 2032466 R 637887 CDS YP_005688246.1 385779081 12421470 complement(2033281..2033550) 1 NC_017304.1 KEGG: cce:Ccel_2034 flagellar biosynthetic protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ 2033550 12421470 Clo1313_1738 Clostridium thermocellum DSM 1313 flagellar biosynthetic protein FliQ YP_005688246.1 2033281 R 637887 CDS YP_005688247.1 385779082 12421471 complement(2033603..2034385) 1 NC_017304.1 KEGG: cce:Ccel_2035 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 2034385 12421471 Clo1313_1739 Clostridium thermocellum DSM 1313 flagellar biosynthetic protein FliP YP_005688247.1 2033603 R 637887 CDS YP_005688248.1 385779083 12421472 complement(2034375..2034872) 1 NC_017304.1 KEGG: cce:Ccel_2036 hypothetical protein; hypothetical protein 2034872 12421472 Clo1313_1740 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688248.1 2034375 R 637887 CDS YP_005688249.1 385779084 12421473 complement(2034942..2035304) 1 NC_017304.1 KEGG: ate:Athe_2159 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2035304 12421473 Clo1313_1741 Clostridium thermocellum DSM 1313 response regulator receiver protein YP_005688249.1 2034942 R 637887 CDS YP_005688250.1 385779085 12421474 complement(2035424..2036644) 1 NC_017304.1 KEGG: cce:Ccel_2038 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; CheC, inhibitor of MCP methylation / FliN fusion protein 2036644 12421474 Clo1313_1742 Clostridium thermocellum DSM 1313 CheC, inhibitor of MCP methylation / FliN fusion protein YP_005688250.1 2035424 R 637887 CDS YP_005688251.1 385779086 12421475 complement(2036646..2037632) 1 NC_017304.1 KEGG: cce:Ccel_2039 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 2037632 12421475 Clo1313_1743 Clostridium thermocellum DSM 1313 flagellar motor switch protein FliM YP_005688251.1 2036646 R 637887 CDS YP_005688252.1 385779087 12421476 complement(2037645..2038148) 1 NC_017304.1 PFAM: flagellar basal body-associated protein FliL; KEGG: cce:Ccel_2040 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 2038148 12421476 Clo1313_1744 Clostridium thermocellum DSM 1313 flagellar basal body-associated protein FliL YP_005688252.1 2037645 R 637887 CDS YP_005688253.1 385779088 12421477 complement(2038230..2038442) 1 NC_017304.1 PFAM: flagellar FlbD family protein; KEGG: tte:TTE1432 hypothetical protein; flagellar FlbD family protein 2038442 12421477 Clo1313_1745 Clostridium thermocellum DSM 1313 flagellar FlbD family protein YP_005688253.1 2038230 R 637887 CDS YP_005688254.1 385779089 12421478 complement(2038656..2039978) 1 NC_017304.1 KEGG: cce:Ccel_2042 protein of unknown function DUF1078 domain protein; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; flagellar hook-basal body protein 2039978 12421478 Clo1313_1746 Clostridium thermocellum DSM 1313 flagellar hook-basal body protein YP_005688254.1 2038656 R 637887 CDS YP_005688255.1 385779090 12421479 complement(2040144..2040533) 1 NC_017304.1 TIGRFAM: flagellar operon protein; KEGG: cce:Ccel_2043 flagellar operon protein; flagellar operon protein 2040533 12421479 Clo1313_1747 Clostridium thermocellum DSM 1313 flagellar operon protein YP_005688255.1 2040144 R 637887 CDS YP_005688256.1 385779091 12421480 complement(2040583..2041554) 1 NC_017304.1 PFAM: flagellar hook capping protein; KEGG: cce:Ccel_2044 flagellar hook capping protein; flagellar hook capping protein 2041554 12421480 Clo1313_1748 Clostridium thermocellum DSM 1313 flagellar hook capping protein YP_005688256.1 2040583 R 637887 CDS YP_005688257.1 385779092 12421481 complement(2041570..2043156) 1 NC_017304.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: cce:Ccel_2045 flagellar hook-length control protein; Flagellar hook-length control protein-like, C-terminal domain 2043156 12421481 Clo1313_1749 Clostridium thermocellum DSM 1313 Flagellar hook-length control protein-like, C-terminal domain YP_005688257.1 2041570 R 637887 CDS YP_005688258.1 385779093 12421482 complement(2043201..2044031) 1 NC_017304.1 KEGG: cce:Ccel_2046 hypothetical protein; hypothetical protein 2044031 12421482 Clo1313_1750 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688258.1 2043201 R 637887 CDS YP_005688259.1 385779094 12421483 complement(2044093..2044551) 1 NC_017304.1 KEGG: cce:Ccel_2047 flagellar export protein FliJ; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein; flagellar export protein FliJ 2044551 12421483 Clo1313_1751 Clostridium thermocellum DSM 1313 flagellar export protein FliJ YP_005688259.1 2044093 R 637887 CDS YP_005688260.1 385779095 12421484 complement(2044573..2045886) 1 NC_017304.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cce:Ccel_2048 ATPase FliI/YscN; SMART: AAA ATPase; FliI/YscN family ATPase 2045886 12421484 Clo1313_1752 Clostridium thermocellum DSM 1313 FliI/YscN family ATPase YP_005688260.1 2044573 R 637887 CDS YP_005688261.1 385779096 12421485 complement(2045931..2046722) 1 NC_017304.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: cce:Ccel_2049 flagellar assembly protein FliH; flagellar assembly protein FliH/type III secretion system HrpE 2046722 12421485 Clo1313_1753 Clostridium thermocellum DSM 1313 flagellar assembly protein FliH/type III secretion system HrpE YP_005688261.1 2045931 R 637887 CDS YP_005688262.1 385779097 12421486 complement(2046715..2047737) 1 NC_017304.1 KEGG: cce:Ccel_2050 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; MgtE intracellular region; flagellar motor switch protein FliG 2047737 12421486 Clo1313_1754 Clostridium thermocellum DSM 1313 flagellar motor switch protein FliG YP_005688262.1 2046715 R 637887 CDS YP_005688263.1 385779098 12421487 complement(2047789..2049342) 1 NC_017304.1 KEGG: cce:Ccel_2051 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF 2049342 12421487 Clo1313_1755 Clostridium thermocellum DSM 1313 flagellar M-ring protein FliF YP_005688263.1 2047789 R 637887 CDS YP_005688264.1 385779099 12421488 complement(2049428..2049742) 1 NC_017304.1 KEGG: cce:Ccel_2052 flagellar hook-basal body complex subunit FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 2049742 12421488 Clo1313_1756 Clostridium thermocellum DSM 1313 flagellar hook-basal body complex subunit FliE YP_005688264.1 2049428 R 637887 CDS YP_005688265.1 385779100 12421489 complement(2049801..2050244) 1 NC_017304.1 KEGG: cce:Ccel_2053 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC 2050244 12421489 Clo1313_1757 Clostridium thermocellum DSM 1313 flagellar basal-body rod protein FlgC YP_005688265.1 2049801 R 637887 CDS YP_005688266.1 385779101 12421490 complement(2050251..2050655) 1 NC_017304.1 KEGG: cce:Ccel_2054 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB 2050655 12421490 Clo1313_1758 Clostridium thermocellum DSM 1313 flagellar basal-body rod protein FlgB YP_005688266.1 2050251 R 637887 CDS YP_005688267.1 385779102 12421491 complement(2051095..2052405) 1 NC_017304.1 TIGRFAM: gid protein; KEGG: cce:Ccel_2055 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A; hypothetical protein 2052405 12421491 Clo1313_1759 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688267.1 2051095 R 637887 CDS YP_005688268.1 385779103 12421492 complement(2052407..2054515) 1 NC_017304.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: cce:Ccel_2056 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I 2054515 12421492 Clo1313_1760 Clostridium thermocellum DSM 1313 DNA topoisomerase I YP_005688268.1 2052407 R 637887 CDS YP_005688269.1 385779104 12421493 complement(2054609..2055721) 1 NC_017304.1 KEGG: tpd:Teth39_1265 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 2055721 12421493 Clo1313_1761 Clostridium thermocellum DSM 1313 DNA protecting protein DprA YP_005688269.1 2054609 R 637887 CDS YP_005688270.1 385779105 12421494 complement(2055901..2056656) 1 NC_017304.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: aoe:Clos_2318 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 2056656 12421494 Clo1313_1762 Clostridium thermocellum DSM 1313 exodeoxyribonuclease III Xth YP_005688270.1 2055901 R 637887 CDS YP_005688271.1 385779106 12421495 complement(2056863..2057225) 1 NC_017304.1 PFAM: protein of unknown function DUF307; KEGG: dhd:Dhaf_2585 hypothetical protein; hypothetical protein 2057225 12421495 Clo1313_1763 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688271.1 2056863 R 637887 CDS YP_005688272.1 385779107 12421496 complement(2057255..2057671) 1 NC_017304.1 PFAM: protein of unknown function UPF0047; KEGG: cce:Ccel_0515 protein of unknown function UPF0047; hypothetical protein 2057671 12421496 Clo1313_1764 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688272.1 2057255 R 637887 CDS YP_005688273.1 385779108 12421497 complement(2057688..2059226) 1 NC_017304.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: cce:Ccel_2058 Mg chelatase, subunit ChlI; SMART: AAA ATPase; Mg chelatase subunit ChlI 2059226 12421497 Clo1313_1765 Clostridium thermocellum DSM 1313 Mg chelatase subunit ChlI YP_005688273.1 2057688 R 637887 CDS YP_005688274.1 385779109 12421498 2059553..2059957 1 NC_017304.1 KEGG: cno:NT01CX_0994 hypothetical protein; hypothetical protein 2059957 12421498 Clo1313_1766 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688274.1 2059553 D 637887 CDS YP_005688275.1 385779110 12421499 complement(2060023..2060463) 1 NC_017304.1 KEGG: cce:Ccel_2895 hypothetical protein; hypothetical protein 2060463 12421499 Clo1313_1767 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688275.1 2060023 R 637887 CDS YP_005688276.1 385779111 12421500 complement(2060623..2061414) 1 NC_017304.1 PFAM: cellulosome anchoring protein cohesin region; copper amine oxidase-like domain-containing protein; KEGG: cce:Ccel_0733 cellulosome anchoring protein cohesin region; cellulosome anchoring protein cohesin subunit 2061414 12421500 Clo1313_1768 Clostridium thermocellum DSM 1313 cellulosome anchoring protein cohesin subunit YP_005688276.1 2060623 R 637887 CDS YP_005688277.1 385779112 12421501 complement(2061482..2063353) 1 NC_017304.1 PFAM: protein of unknown function DUF115; KEGG: aoe:Clos_2517 hypothetical protein; hypothetical protein 2063353 12421501 Clo1313_1769 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688277.1 2061482 R 637887 CDS YP_005688278.1 385779113 12421502 complement(2063409..2063864) 1 NC_017304.1 PFAM: ATP-cone domain protein; KEGG: cce:Ccel_2059 transcriptional regulator NrdR; ATP-cone domain-containing protein 2063864 12421502 Clo1313_1770 Clostridium thermocellum DSM 1313 ATP-cone domain-containing protein YP_005688278.1 2063409 R 637887 CDS YP_005688279.1 385779114 12421503 complement(2064012..2064272) 1 NC_017304.1 KEGG: cce:Ccel_2060 sporulation protein, YlmC/YmxH family; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; YlmC/YmxH family sporulation protein 2064272 12421503 Clo1313_1771 Clostridium thermocellum DSM 1313 YlmC/YmxH family sporulation protein YP_005688279.1 2064012 R 637887 CDS YP_005688280.1 385779115 12421504 complement(2064529..2065302) 1 NC_017304.1 KEGG: cce:Ccel_2061 sporulation sigma factor SigG; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 28 subunit SigG 2065302 12421504 Clo1313_1772 Clostridium thermocellum DSM 1313 RNA polymerase sigma 28 subunit SigG YP_005688280.1 2064529 R 637887 CDS YP_005688281.1 385779116 12421505 complement(2065463..2066197) 1 NC_017304.1 KEGG: cce:Ccel_2062 sporulation sigma factor SigE; TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 28 subunit SigE 2066197 12421505 Clo1313_1773 Clostridium thermocellum DSM 1313 RNA polymerase sigma 28 subunit SigE YP_005688281.1 2065463 R 637887 CDS YP_005688282.1 385779117 12421506 complement(2066250..2067143) 1 NC_017304.1 KEGG: cce:Ccel_2063 sigma-E processing peptidase SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; sigma-E processing peptidase SpoIIGA 2067143 12421506 Clo1313_1774 Clostridium thermocellum DSM 1313 sigma-E processing peptidase SpoIIGA YP_005688282.1 2066250 R 637887 CDS YP_005688283.1 385779118 12421507 complement(2067379..2068473) 1 NC_017304.1 KEGG: cce:Ccel_2064 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 2068473 12421507 Clo1313_1775 Clostridium thermocellum DSM 1313 cell division protein FtsZ YP_005688283.1 2067379 R 637887 CDS YP_005688284.1 385779119 12421508 complement(2068799..2070040) 1 NC_017304.1 KEGG: cce:Ccel_2065 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA 2070040 12421508 Clo1313_1776 Clostridium thermocellum DSM 1313 cell division protein FtsA YP_005688284.1 2068799 R 637887 CDS YP_005688285.1 385779120 12421509 complement(2070203..2070580) 1 NC_017304.1 PFAM: protein of unknown function DUF1290; KEGG: cce:Ccel_2066 protein of unknown function DUF1290; hypothetical protein 2070580 12421509 Clo1313_1777 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688285.1 2070203 R 637887 CDS YP_005688286.1 385779121 12421510 complement(2070596..2071456) 1 NC_017304.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: cce:Ccel_2067 polypeptide-transport-associated domain protein FtsQ-type; polypeptide-transport-associated domain-containing protein 2071456 12421510 Clo1313_1778 Clostridium thermocellum DSM 1313 polypeptide-transport-associated domain-containing protein YP_005688286.1 2070596 R 637887 CDS YP_005688287.1 385779122 12421512 2072650..2074053 1 NC_017304.1 PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: cce:Ccel_2069 domain of unknown function DUF1727; hypothetical protein 2074053 12421512 Clo1313_1780 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688287.1 2072650 D 637887 CDS YP_005688288.1 385779123 12421513 2074055..2074801 1 NC_017304.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: cce:Ccel_2070 CobB/CobQ domain protein glutamine amidotransferase; CobB/CobQ domain-containing protein glutamine amidotransferase 2074801 12421513 Clo1313_1781 Clostridium thermocellum DSM 1313 CobB/CobQ domain-containing protein glutamine amidotransferase YP_005688288.1 2074055 D 637887 CDS YP_005688289.1 385779124 12421514 complement(2075518..2076738) 1 NC_017304.1 PFAM: transposase mutator type; KEGG: bts:Btus_2829 transposase mutator type; transposase mutator type 2076738 12421514 Clo1313_1782 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688289.1 2075518 R 637887 CDS YP_005688290.1 385779125 12421515 complement(2076922..2077308) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: cce:Ccel_2162 lipolytic protein G-D-S-L family; Dockerin type 1 2077308 12421515 Clo1313_1783 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688290.1 2076922 R 637887 CDS YP_005688291.1 385779126 12421516 complement(2077601..2078059) 1 NC_017304.1 KEGG: sea:SeAg_B3342 hypothetical protein; hypothetical protein 2078059 12421516 Clo1313_1784 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688291.1 2077601 R 637887 CDS YP_005688292.1 385779127 12421517 complement(2078103..2081273) 1 NC_017304.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; hypothetical protein 2081273 12421517 Clo1313_1785 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688292.1 2078103 R 637887 CDS YP_005688293.1 385779128 12421518 complement(2081584..2082813) 1 NC_017304.1 KEGG: cce:Ccel_2442 cellulosome protein dockerin type I; manually curated; PFAM: Dockerin type 1; Dockerin type 1 2082813 12421518 Clo1313_1786 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688293.1 2081584 R 637887 CDS YP_005688294.1 385779129 12421519 complement(2082841..2083941) 1 NC_017304.1 KEGG: amt:Amet_3105 ATPase; ATPase 2083941 12421519 Clo1313_1787 Clostridium thermocellum DSM 1313 ATPase YP_005688294.1 2082841 R 637887 CDS YP_005688295.1 385779130 12421520 complement(2084110..2086479) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0753 glycoside hydrolase family 9; glycoside hydrolase 2086479 12421520 Clo1313_1788 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688295.1 2084110 R 637887 CDS YP_005688296.1 385779131 12421521 2087059..2087679 1 NC_017304.1 KEGG: mcc:697382 nebulin-related anchoring protein; hypothetical protein 2087679 12421521 Clo1313_1789 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688296.1 2087059 D 637887 CDS YP_005688297.1 385779132 12421522 complement(2087859..2088104) 1 NC_017304.1 KEGG: emi:Emin_0753 hypothetical protein; hypothetical protein 2088104 12421522 Clo1313_1790 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688297.1 2087859 R 637887 CDS YP_005688298.1 385779133 12421523 complement(2088106..2089806) 1 NC_017304.1 KEGG: cpy:Cphy_0087 hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase, Fe-only 2089806 12421523 Clo1313_1791 Clostridium thermocellum DSM 1313 hydrogenase, Fe-only YP_005688298.1 2088106 R 637887 CDS YP_005688299.1 385779134 12421524 complement(2089811..2091685) 1 NC_017304.1 KEGG: cbk:CLL_A2308 putative iron hydrogenase, electron-transfer subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 2091685 12421524 Clo1313_1792 Clostridium thermocellum DSM 1313 NADH dehydrogenase (quinone) YP_005688299.1 2089811 R 637887 CDS YP_005688300.1 385779135 12421525 complement(2091678..2092175) 1 NC_017304.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cpy:Cphy_0089 NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 2092175 12421525 Clo1313_1793 Clostridium thermocellum DSM 1313 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_005688300.1 2091678 R 637887 CDS YP_005688301.1 385779136 12421526 complement(2092187..2093356) 1 NC_017304.1 KEGG: emi:Emin_0751 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; Stage II sporulation protein E 2093356 12421526 Clo1313_1794 Clostridium thermocellum DSM 1313 Stage II sporulation protein E YP_005688301.1 2092187 R 637887 CDS YP_005688302.1 385779137 12421527 complement(2093349..2095019) 1 NC_017304.1 KEGG: emi:Emin_0752 putative PAS/PAC sensor protein; PFAM: Fe-S cluster domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 2095019 12421527 Clo1313_1795 Clostridium thermocellum DSM 1313 PAS/PAC sensor protein YP_005688302.1 2093349 R 637887 CDS YP_005688303.1 385779138 12421528 complement(2095072..2095317) 1 NC_017304.1 KEGG: emi:Emin_0753 hypothetical protein; hypothetical protein 2095317 12421528 Clo1313_1796 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688303.1 2095072 R 637887 CDS YP_005688304.1 385779139 12421529 complement(2095330..2096079) 1 NC_017304.1 PFAM: aminoglycoside phosphotransferase; KEGG: emi:Emin_0754 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2096079 12421529 Clo1313_1797 Clostridium thermocellum DSM 1313 aminoglycoside phosphotransferase YP_005688304.1 2095330 R 637887 CDS YP_005688305.1 385779140 12421530 complement(2096076..2098697) 1 NC_017304.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: emi:Emin_0755 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2098697 12421530 Clo1313_1798 Clostridium thermocellum DSM 1313 iron-containing alcohol dehydrogenase YP_005688305.1 2096076 R 637887 CDS YP_005688306.1 385779141 12421531 complement(2098678..2099361) 1 NC_017304.1 KEGG: emi:Emin_0756 redox-sensing transcriptional repressor REX; PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; SMART: CoA-binding domain protein; CoA-binding protein 2099361 12421531 Clo1313_1799 Clostridium thermocellum DSM 1313 CoA-binding protein YP_005688306.1 2098678 R 637887 CDS YP_005688307.1 385779142 12421532 complement(2099678..2100262) 1 NC_017304.1 KEGG: cce:Ccel_1704 dipicolinate synthase subunit B; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: flavoprotein; dipicolinic acid synthetase subunit B 2100262 12421532 Clo1313_1800 Clostridium thermocellum DSM 1313 dipicolinic acid synthetase subunit B YP_005688307.1 2099678 R 637887 CDS YP_005688308.1 385779143 12421533 complement(2100267..2101139) 1 NC_017304.1 KEGG: cce:Ccel_1705 dipicolinate synthase subunit A; dipicolinate synthase subunit A 2101139 12421533 Clo1313_1801 Clostridium thermocellum DSM 1313 dipicolinate synthase subunit A YP_005688308.1 2100267 R 637887 CDS YP_005688309.1 385779144 12421534 complement(2101343..2102602) 1 NC_017304.1 PFAM: peptidase M16 domain protein; KEGG: cce:Ccel_1706 peptidase M16 domain protein; peptidase M16 domain-containing protein 2102602 12421534 Clo1313_1802 Clostridium thermocellum DSM 1313 peptidase M16 domain-containing protein YP_005688309.1 2101343 R 637887 CDS YP_005688310.1 385779145 12421535 complement(2102734..2104836) 1 NC_017304.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: cce:Ccel_1707 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; Polynucleotide phosphorylase, phosphorolytic RNA-binding; polyribonucleotide nucleotidyltransferase 2104836 12421535 Clo1313_1803 Clostridium thermocellum DSM 1313 polyribonucleotide nucleotidyltransferase YP_005688310.1 2102734 R 637887 CDS YP_005688311.1 385779146 12421536 complement(2105072..2105335) 1 NC_017304.1 KEGG: tte:TTE1388 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 2105335 12421536 Clo1313_1804 Clostridium thermocellum DSM 1313 30S ribosomal protein S15 YP_005688311.1 2105072 R 637887 CDS YP_005688312.1 385779147 12421537 2105610..2105867 1 NC_017304.1 KEGG: cac:CA_C1336 hypothetical protein; hypothetical protein 2105867 12421537 Clo1313_1805 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688312.1 2105610 D 637887 CDS YP_005688313.1 385779148 12421538 2105880..2106125 1 NC_017304.1 KEGG: cac:CA_C1337 spore coat protein CotJB; spore coat protein CotJB 2106125 12421538 Clo1313_1806 Clostridium thermocellum DSM 1313 spore coat protein CotJB YP_005688313.1 2105880 D 637887 CDS YP_005688314.1 385779149 12421539 2106188..2106799 1 NC_017304.1 PFAM: manganese containing catalase; KEGG: cac:CA_C1338 spore coat protein CotJC; manganese containing catalase 2106799 12421539 Clo1313_1807 Clostridium thermocellum DSM 1313 manganese containing catalase YP_005688314.1 2106188 D 637887 CDS YP_005688315.1 385779150 12421540 complement(2106907..2110599) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: cce:Ccel_0732 glycoside hydrolase family 9; glycoside hydrolase 2110599 12421540 Clo1313_1808 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688315.1 2106907 R 637887 CDS YP_005688316.1 385779151 12421541 complement(2111126..2113813) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; Dockerin type 1; KEGG: cce:Ccel_0732 glycoside hydrolase family 9; glycoside hydrolase 2113813 12421541 Clo1313_1809 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688316.1 2111126 R 637887 CDS YP_005688317.1 385779152 12421542 2114739..2115773 1 NC_017304.1 KEGG: ddi:DDB_G0289603 hypothetical protein; hypothetical protein 2115773 12421542 Clo1313_1810 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688317.1 2114739 D 637887 CDS YP_005688318.1 385779153 12421543 complement(2115944..2117302) 1 NC_017304.1 PFAM: protein of unknown function DUF711; KEGG: cce:Ccel_1722 hypothetical protein; hypothetical protein 2117302 12421543 Clo1313_1811 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688318.1 2115944 R 637887 CDS YP_005688319.1 385779154 12421544 complement(2117317..2117586) 1 NC_017304.1 PFAM: amino acid-binding ACT domain protein; KEGG: cce:Ccel_1723 hypothetical protein; ACT domain-containing protein 2117586 12421544 Clo1313_1812 Clostridium thermocellum DSM 1313 ACT domain-containing protein YP_005688319.1 2117317 R 637887 CDS YP_005688320.1 385779155 12421545 complement(2117653..2120241) 1 NC_017304.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold domain protein; KEGG: tjr:TherJR_0997 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2120241 12421545 Clo1313_1813 Clostridium thermocellum DSM 1313 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_005688320.1 2117653 R 637887 CDS YP_005688321.1 385779156 12421546 2120532..2121839 1 NC_017304.1 KEGG: aoe:Clos_0640 radical SAM domain-containing protein; radical SAM domain-containing protein 2121839 12421546 Clo1313_1814 Clostridium thermocellum DSM 1313 radical SAM domain-containing protein YP_005688321.1 2120532 D 637887 CDS YP_005688322.1 385779157 12421547 2121869..2122606 1 NC_017304.1 KEGG: hmo:HM1_0506 hypothetical protein; hypothetical protein 2122606 12421547 Clo1313_1815 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688322.1 2121869 D 637887 CDS YP_005688323.1 385779158 12421548 complement(2122632..2124212) 1 NC_017304.1 PFAM: glycoside hydrolase family 5; Dockerin type 1; KEGG: csc:Csac_1078 cellulose 1,4-beta-cellobiosidase; glycoside hydrolase 2124212 12421548 Clo1313_1816 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688323.1 2122632 R 637887 CDS YP_005688324.1 385779159 12421549 complement(2124295..2125863) 1 NC_017304.1 PFAM: type 3a cellulose-binding domain protein; KEGG: cpy:Cphy_3368 cellulose 1,4-beta-cellobiosidase; type 3a cellulose-binding domain-containing protein 2125863 12421549 Clo1313_1817 Clostridium thermocellum DSM 1313 type 3a cellulose-binding domain-containing protein YP_005688324.1 2124295 R 637887 CDS YP_005688325.1 385779160 12421550 complement(2125863..2126687) 1 NC_017304.1 KEGG: cce:Ccel_1739 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; RNA polymerase, sigma 28 subunit, SigI 2126687 12421550 Clo1313_1818 Clostridium thermocellum DSM 1313 RNA polymerase, sigma 28 subunit, SigI YP_005688325.1 2125863 R 637887 CDS YP_005688326.1 385779161 12421551 complement(2126847..2129045) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: cpo:COPRO5265_0075 anion ABC transporter, anion-binding protein; copper amine oxidase-like domain-containing protein 2129045 12421551 Clo1313_1819 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688326.1 2126847 R 637887 CDS YP_005688327.1 385779162 12421552 complement(2129302..2131569) 1 NC_017304.1 KEGG: cce:Ccel_3226 methyl-accepting chemotaxis sensory transducer; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2131569 12421552 Clo1313_1820 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688327.1 2129302 R 637887 CDS YP_005688328.1 385779163 12421553 2132239..2133267 1 NC_017304.1 KEGG: bha:BH1806 hypothetical protein; hypothetical protein 2133267 12421553 Clo1313_1821 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688328.1 2132239 D 637887 CDS YP_005688329.1 385779164 12421554 2133260..2134087 1 NC_017304.1 PFAM: protein of unknown function DUF477; KEGG: str:Sterm_3173 protein of unknown function DUF477; hypothetical protein 2134087 12421554 Clo1313_1822 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688329.1 2133260 D 637887 CDS YP_005688330.1 385779165 12421555 complement(2134227..2134547) 1 NC_017304.1 PFAM: protein of unknown function DUF74; KEGG: ckr:CKR_2147 hypothetical protein; hypothetical protein 2134547 12421555 Clo1313_1823 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688330.1 2134227 R 637887 CDS YP_005688331.1 385779166 12421556 complement(2134685..2136445) 1 NC_017304.1 KEGG: cpy:Cphy_2429 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter 2136445 12421556 Clo1313_1824 Clostridium thermocellum DSM 1313 ABC transporter YP_005688331.1 2134685 R 637887 CDS YP_005688332.1 385779167 12421557 complement(2136447..2138171) 1 NC_017304.1 KEGG: eel:EUBELI_01692 ATP-binding cassette subfamily C protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter 2138171 12421557 Clo1313_1825 Clostridium thermocellum DSM 1313 ABC transporter YP_005688332.1 2136447 R 637887 CDS YP_005688333.1 385779168 12421558 complement(2138598..2139023) 1 NC_017304.1 PFAM: RbsD or FucU transport; KEGG: sub:SUB1310 D-ribose pyranase; transporter 2139023 12421558 Clo1313_1826 Clostridium thermocellum DSM 1313 transporter YP_005688333.1 2138598 R 637887 CDS YP_005688334.1 385779169 12421559 complement(2139037..2140206) 1 NC_017304.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cdf:CD3105 alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2140206 12421559 Clo1313_1827 Clostridium thermocellum DSM 1313 iron-containing alcohol dehydrogenase YP_005688334.1 2139037 R 637887 CDS YP_005688335.1 385779170 12421560 complement(2140244..2141209) 1 NC_017304.1 KEGG: tit:Thit_1705 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 2141209 12421560 Clo1313_1828 Clostridium thermocellum DSM 1313 periplasmic binding protein/LacI transcriptional regulator YP_005688335.1 2140244 R 637887 CDS YP_005688336.1 385779171 12421561 complement(2141289..2142338) 1 NC_017304.1 PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; inner-membrane translocator 2142338 12421561 Clo1313_1829 Clostridium thermocellum DSM 1313 inner-membrane translocator YP_005688336.1 2141289 R 637887 CDS YP_005688337.1 385779172 12421562 complement(2142350..2143849) 1 NC_017304.1 KEGG: ate:Athe_2266 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2143849 12421562 Clo1313_1830 Clostridium thermocellum DSM 1313 ABC transporter YP_005688337.1 2142350 R 637887 CDS YP_005688338.1 385779173 12421563 complement(2144167..2145381) 1 NC_017304.1 PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon; ROK family protein 2145381 12421563 Clo1313_1831 Clostridium thermocellum DSM 1313 ROK family protein YP_005688338.1 2144167 R 637887 CDS YP_005688339.1 385779174 12421564 complement(2145437..2146408) 1 NC_017304.1 PFAM: PfkB domain protein; KEGG: tmt:Tmath_1672 PfkB domain protein; PfkB domain-containing protein 2146408 12421564 Clo1313_1832 Clostridium thermocellum DSM 1313 PfkB domain-containing protein YP_005688339.1 2145437 R 637887 CDS YP_005688340.1 385779175 12421565 complement(2146446..2147480) 1 NC_017304.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ere:EUBREC_1410 hypothetical protein; alcohol dehydrogenase GroES domain-containing protein 2147480 12421565 Clo1313_1833 Clostridium thermocellum DSM 1313 alcohol dehydrogenase GroES domain-containing protein YP_005688340.1 2146446 R 637887 CDS YP_005688341.1 385779176 12421566 complement(2147757..2148362) 1 NC_017304.1 KEGG: ehi:EHI_119550 CCR4/NOT transcription complex subunit 3; hypothetical protein 2148362 12421566 Clo1313_1834 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688341.1 2147757 R 637887 CDS YP_005688342.1 385779177 12421567 complement(2148367..2148651) 1 NC_017304.1 KEGG: ret:RHE_CH00443 hypothetical protein; hypothetical protein 2148651 12421567 Clo1313_1835 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688342.1 2148367 R 637887 CDS YP_005688343.1 385779178 12421570 complement(2149473..2150186) 1 NC_017304.1 KEGG: dhd:Dhaf_3802 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2150186 12421570 Clo1313_1838 Clostridium thermocellum DSM 1313 ABC transporter YP_005688343.1 2149473 R 637887 CDS YP_005688344.1 385779179 12421572 complement(2151574..2152296) 1 NC_017304.1 KEGG: swp:swp_0823 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; hypothetical protein 2152296 12421572 Clo1313_1840 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688344.1 2151574 R 637887 CDS YP_005688345.1 385779180 12421573 complement(2152313..2152552) 1 NC_017304.1 KEGG: pfh:PFHG_00634 conserved hypothetical protein; hypothetical protein 2152552 12421573 Clo1313_1841 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688345.1 2152313 R 637887 CDS YP_005688346.1 385779181 12421574 complement(2152678..2153640) 1 NC_017304.1 KEGG: noc:Noc_2864 phospho-N-acetylmuramoyl-pentapeptide-transferase; hypothetical protein 2153640 12421574 Clo1313_1842 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688346.1 2152678 R 637887 CDS YP_005688347.1 385779182 12421575 complement(2153637..2154245) 1 NC_017304.1 KEGG: cpy:Cphy_3187 hypothetical protein; hypothetical protein 2154245 12421575 Clo1313_1843 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688347.1 2153637 R 637887 CDS YP_005688348.1 385779183 12421576 complement(2154259..2155167) 1 NC_017304.1 KEGG: dsy:DSY1087 hypothetical protein; manually curated; PFAM: peptidase M56 BlaR1; peptidase M56 BlaR1 2155167 12421576 Clo1313_1844 Clostridium thermocellum DSM 1313 peptidase M56 BlaR1 YP_005688348.1 2154259 R 637887 CDS YP_005688349.1 385779184 12421577 complement(2155174..2155527) 1 NC_017304.1 KEGG: dsy:DSY1088 hypothetical protein; manually curated; PFAM: Penicillinase repressor; CopY family transcriptional repressor 2155527 12421577 Clo1313_1845 Clostridium thermocellum DSM 1313 CopY family transcriptional repressor YP_005688349.1 2155174 R 637887 CDS YP_005688350.1 385779185 12421578 complement(2155697..2157232) 1 NC_017304.1 manually curated; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; KEGG: cce:Ccel_2202 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase large subunit 2157232 12421578 Clo1313_1846 Clostridium thermocellum DSM 1313 GMP synthase large subunit YP_005688350.1 2155697 R 637887 CDS YP_005688351.1 385779186 12421579 complement(2157432..2158766) 1 NC_017304.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: cce:Ccel_2430 glutamate dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 2158766 12421579 Clo1313_1847 Clostridium thermocellum DSM 1313 Glu/Leu/Phe/Val dehydrogenase YP_005688351.1 2157432 R 637887 CDS YP_005688352.1 385779187 12421580 2159272..2160117 1 NC_017304.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: cce:Ccel_2546 ferredoxin-NADP(+) reductase subunit alpha; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2160117 12421580 Clo1313_1848 Clostridium thermocellum DSM 1313 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_005688352.1 2159272 D 637887 CDS YP_005688353.1 385779188 12421581 2160110..2161504 1 NC_017304.1 KEGG: cce:Ccel_2545 glutamate synthase (NADPH), homotetrameric; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH), homotetrameric 2161504 12421581 Clo1313_1849 Clostridium thermocellum DSM 1313 glutamate synthase (NADPH), homotetrameric YP_005688353.1 2160110 D 637887 CDS YP_005688354.1 385779189 12421582 2161678..2162901 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 2162901 12421582 Clo1313_1850 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688354.1 2161678 D 637887 CDS YP_005688355.1 385779190 12421583 complement(2163333..2164274) 1 NC_017304.1 TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: cce:Ccel_2203 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 2164274 12421583 Clo1313_1851 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688355.1 2163333 R 637887 CDS YP_005688356.1 385779191 12421584 complement(2164261..2165484) 1 NC_017304.1 PFAM: protein of unknown function DUF111; KEGG: cce:Ccel_2204 protein of unknown function DUF111; hypothetical protein 2165484 12421584 Clo1313_1852 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688356.1 2164261 R 637887 CDS YP_005688357.1 385779192 12421585 complement(2165499..2166245) 1 NC_017304.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cce:Ccel_2205 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 2166245 12421585 Clo1313_1853 Clostridium thermocellum DSM 1313 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_005688357.1 2165499 R 637887 CDS YP_005688358.1 385779193 12421586 complement(2166273..2167142) 1 NC_017304.1 PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: chy:CHY_2378 hypothetical protein; hypothetical protein 2167142 12421586 Clo1313_1854 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688358.1 2166273 R 637887 CDS YP_005688359.1 385779194 12421587 2167453..2170230 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: pfh:PFHG_04450 conserved hypothetical protein; copper amine oxidase-like domain-containing protein 2170230 12421587 Clo1313_1855 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688359.1 2167453 D 637887 CDS YP_005688360.1 385779195 12421588 complement(join(2170340..2171392,2171394..2171468)) 1 NC_017304.1 peptide chain release factor 2 2171468 12421588 Clo1313_1856 Clostridium thermocellum DSM 1313 peptide chain release factor 2 YP_005688360.1 2170340 R 637887 CDS YP_005688361.1 385779196 12421589 complement(2171721..2172416) 1 NC_017304.1 KEGG: tex:Teth514_0702 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2172416 12421589 Clo1313_1857 Clostridium thermocellum DSM 1313 helix-turn-helix domain-containing protein YP_005688361.1 2171721 R 637887 CDS YP_005688362.1 385779197 12421590 complement(2173147..2174319) 1 NC_017304.1 PFAM: aminotransferase class I and II; KEGG: cbt:CLH_2728 aspartate aminotransferase; class I and II aminotransferase 2174319 12421590 Clo1313_1858 Clostridium thermocellum DSM 1313 class I and II aminotransferase YP_005688362.1 2173147 R 637887 CDS YP_005688363.1 385779198 12421591 complement(2174316..2174795) 1 NC_017304.1 KEGG: cno:NT01CX_1456 AsnC/Lrp family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 2174795 12421591 Clo1313_1859 Clostridium thermocellum DSM 1313 AsnC family transcriptional regulator YP_005688363.1 2174316 R 637887 CDS YP_005688364.1 385779199 12421592 complement(2174984..2175202) 1 NC_017304.1 hypothetical protein 2175202 12421592 Clo1313_1860 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688364.1 2174984 R 637887 CDS YP_005688365.1 385779200 12421593 complement(2175311..2175877) 1 NC_017304.1 KEGG: cce:Ccel_2210 hypothetical protein; hypothetical protein 2175877 12421593 Clo1313_1861 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688365.1 2175311 R 637887 CDS YP_005688366.1 385779201 12421594 complement(2176100..2176429) 1 NC_017304.1 KEGG: cce:Ccel_2211 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin 2176429 12421594 Clo1313_1862 Clostridium thermocellum DSM 1313 thioredoxin YP_005688366.1 2176100 R 637887 CDS YP_005688367.1 385779202 12421596 complement(2177094..2178314) 1 NC_017304.1 PFAM: transposase mutator type; KEGG: bts:Btus_2829 transposase mutator type; transposase mutator type 2178314 12421596 Clo1313_1864 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688367.1 2177094 R 637887 CDS YP_005688368.1 385779203 12421597 complement(join(2178945..2179820,2179822..2180097)) 1 NC_017304.1 KEGG: cce:Ccel_1666 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2180097 12421597 Clo1313_1865 Clostridium thermocellum DSM 1313 transposase IS3/IS911 family protein YP_005688368.1 2178945 R 637887 CDS YP_005688369.1 385779204 12421598 2180273..2180806 1 NC_017304.1 KEGG: cbh:CLC_2751 hypothetical protein; hypothetical protein 2180806 12421598 Clo1313_1866 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688369.1 2180273 D 637887 CDS YP_005688370.1 385779205 12421599 2181130..2183697 1 NC_017304.1 TIGRFAM: alpha-glucan phosphorylase; KEGG: cce:Ccel_2215 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase 2183697 12421599 Clo1313_1867 Clostridium thermocellum DSM 1313 alpha-glucan phosphorylase YP_005688370.1 2181130 D 637887 CDS YP_005688371.1 385779206 12421600 complement(join(2183933..2184610,2184610..2185155)) 1 NC_017304.1 KEGG: ate:Athe_2013 transposase mutator type; manually curated; PFAM: transposase mutator type; transposase mutator type 2185155 12421600 Clo1313_1868 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688371.1 2183933 R 637887 CDS YP_005688372.1 385779207 12421601 complement(2185307..2186485) 1 NC_017304.1 KEGG: tjr:TherJR_1670 hypothetical protein; hypothetical protein 2186485 12421601 Clo1313_1869 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688372.1 2185307 R 637887 CDS YP_005688373.1 385779208 12421602 complement(2186556..2187545) 1 NC_017304.1 manually curated; TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: cce:Ccel_2218 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 2187545 12421602 Clo1313_1870 Clostridium thermocellum DSM 1313 CoA-substrate-specific enzyme activase YP_005688373.1 2186556 R 637887 CDS YP_005688374.1 385779209 12421603 complement(2187514..2188629) 1 NC_017304.1 manually curated; KEGG: cce:Ccel_2219 hypothetical protein; hypothetical protein 2188629 12421603 Clo1313_1871 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688374.1 2187514 R 637887 CDS YP_005688375.1 385779210 12421604 complement(2188601..2189593) 1 NC_017304.1 PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: aoe:Clos_2152 hypothetical protein; hypothetical protein 2189593 12421604 Clo1313_1872 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688375.1 2188601 R 637887 CDS YP_005688376.1 385779211 12421605 complement(2189652..2191043) 1 NC_017304.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cce:Ccel_1637 hypothetical protein; PpiC-type peptidyl-prolyl cis-trans isomerase 2191043 12421605 Clo1313_1873 Clostridium thermocellum DSM 1313 PpiC-type peptidyl-prolyl cis-trans isomerase YP_005688376.1 2189652 R 637887 CDS YP_005688377.1 385779212 12421606 complement(2191314..2191880) 1 NC_017304.1 manually curated; TIGRFAM: signal peptidase I; KEGG: eel:EUBELI_01322 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 2191880 12421606 Clo1313_1874 Clostridium thermocellum DSM 1313 signal peptidase I YP_005688377.1 2191314 R 637887 CDS YP_005688378.1 385779213 12421607 complement(2191977..2192906) 1 NC_017304.1 PFAM: ketose-bisphosphate aldolase class-II; manually curated; KEGG: cce:Ccel_2222 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase 2192906 12421607 Clo1313_1875 Clostridium thermocellum DSM 1313 fructose-1,6-bisphosphate aldolase YP_005688378.1 2191977 R 637887 CDS YP_005688379.1 385779214 12421608 2193153..2194400 1 NC_017304.1 PFAM: phosphofructokinase; KEGG: cce:Ccel_2223 6-phosphofructokinase; phosphofructokinase 2194400 12421608 Clo1313_1876 Clostridium thermocellum DSM 1313 phosphofructokinase YP_005688379.1 2193153 D 637887 CDS YP_005688380.1 385779215 12421609 complement(2194472..2194825) 1 NC_017304.1 KEGG: eel:EUBELI_20586 hypothetical protein; hypothetical protein 2194825 12421609 Clo1313_1877 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688380.1 2194472 R 637887 CDS YP_005688381.1 385779216 12421610 2195354..2196310 1 NC_017304.1 KEGG: cce:Ccel_0137 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; L-lactate dehydrogenase 2196310 12421610 Clo1313_1878 Clostridium thermocellum DSM 1313 L-lactate dehydrogenase YP_005688381.1 2195354 D 637887 CDS YP_005688382.1 385779217 12421611 2196363..2197535 1 NC_017304.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: cce:Ccel_0138 malic protein NAD-binding; malic protein NAD-binding protein 2197535 12421611 Clo1313_1879 Clostridium thermocellum DSM 1313 malic protein NAD-binding protein YP_005688382.1 2196363 D 637887 CDS YP_005688383.1 385779218 12421612 complement(2197594..2198196) 1 NC_017304.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cce:Ccel_2225 flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 2198196 12421612 Clo1313_1880 Clostridium thermocellum DSM 1313 flavin reductase domain-containing FMN-binding protein YP_005688383.1 2197594 R 637887 CDS YP_005688384.1 385779219 12421613 complement(2198449..2200197) 1 NC_017304.1 KEGG: cce:Ccel_2232 hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase, Fe-only 2200197 12421613 Clo1313_1881 Clostridium thermocellum DSM 1313 hydrogenase, Fe-only YP_005688384.1 2198449 R 637887 CDS YP_005688385.1 385779220 12421614 complement(2200217..2202010) 1 NC_017304.1 KEGG: cce:Ccel_2233 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 2202010 12421614 Clo1313_1882 Clostridium thermocellum DSM 1313 NADH dehydrogenase (quinone) YP_005688385.1 2200217 R 637887 CDS YP_005688386.1 385779221 12421615 complement(2202043..2202411) 1 NC_017304.1 KEGG: cce:Ccel_2234 ferredoxin; ferredoxin 2202411 12421615 Clo1313_1883 Clostridium thermocellum DSM 1313 ferredoxin YP_005688386.1 2202043 R 637887 CDS YP_005688387.1 385779222 12421616 complement(2202395..2202961) 1 NC_017304.1 KEGG: cce:Ccel_2235 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; ATP-binding protein 2202961 12421616 Clo1313_1884 Clostridium thermocellum DSM 1313 ATP-binding protein YP_005688387.1 2202395 R 637887 CDS YP_005688388.1 385779223 12421617 complement(2202958..2203455) 1 NC_017304.1 KEGG: cce:Ccel_2236 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 2203455 12421617 Clo1313_1885 Clostridium thermocellum DSM 1313 NADH-quinone oxidoreductase subunit E YP_005688388.1 2202958 R 637887 CDS YP_005688389.1 385779224 12421618 complement(2203717..2204427) 1 NC_017304.1 KEGG: cpo:COPRO5265_0176 PHP domain, putative; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 2204427 12421618 Clo1313_1886 Clostridium thermocellum DSM 1313 PHP domain-containing protein YP_005688389.1 2203717 R 637887 CDS YP_005688390.1 385779225 12421619 complement(2204424..2204753) 1 NC_017304.1 PFAM: DRTGG domain protein; KEGG: tex:Teth514_2144 hypothetical protein; DRTGG domain-containing protein 2204753 12421619 Clo1313_1887 Clostridium thermocellum DSM 1313 DRTGG domain-containing protein YP_005688390.1 2204424 R 637887 CDS YP_005688391.1 385779226 12421620 complement(2204753..2206099) 1 NC_017304.1 PFAM: Fe-S cluster domain protein; hydrogenase large subunit domain protein; KEGG: tmt:Tmath_0862 Fe-S cluster domain protein; Fe-S cluster domain-containing protein 2206099 12421620 Clo1313_1888 Clostridium thermocellum DSM 1313 Fe-S cluster domain-containing protein YP_005688391.1 2204753 R 637887 CDS YP_005688392.1 385779227 12421621 complement(2206118..2206567) 1 NC_017304.1 KEGG: cpy:Cphy_3799 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; anti-sigma regulatory factor 2206567 12421621 Clo1313_1889 Clostridium thermocellum DSM 1313 anti-sigma regulatory factor YP_005688392.1 2206118 R 637887 CDS YP_005688393.1 385779228 12421622 complement(2206564..2206917) 1 NC_017304.1 KEGG: tex:Teth514_2147 hypothetical protein; hypothetical protein 2206917 12421622 Clo1313_1890 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688393.1 2206564 R 637887 CDS YP_005688394.1 385779229 12421623 complement(2207050..2208723) 1 NC_017304.1 KEGG: cce:Ccel_1435 AAA ATPase; PFAM: TGS domain-containing protein; SMART: AAA ATPase; TGS domain-containing protein 2208723 12421623 Clo1313_1891 Clostridium thermocellum DSM 1313 TGS domain-containing protein YP_005688394.1 2207050 R 637887 CDS YP_005688395.1 385779230 12421624 complement(2209209..2209646) 1 NC_017304.1 KEGG: oih:OB0441 hypothetical protein; hypothetical protein 2209646 12421624 Clo1313_1892 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688395.1 2209209 R 637887 CDS YP_005688396.1 385779231 12421626 complement(2210347..2211183) 1 NC_017304.1 PFAM: Domain of unknown function DUF1848; KEGG: cbb:CLD_2592 hypothetical protein; hypothetical protein 2211183 12421626 Clo1313_1894 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688396.1 2210347 R 637887 CDS YP_005688397.1 385779232 12421627 complement(2211408..2211833) 1 NC_017304.1 KEGG: cin:445679 nuclear lamin; hypothetical protein 2211833 12421627 Clo1313_1895 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688397.1 2211408 R 637887 CDS YP_005688398.1 385779233 12421628 2212395..2213996 1 NC_017304.1 KEGG: cce:Ccel_1434 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 2213996 12421628 Clo1313_1896 Clostridium thermocellum DSM 1313 peptide chain release factor 3 YP_005688398.1 2212395 D 637887 CDS YP_005688399.1 385779234 12421629 complement(2214176..2216749) 1 NC_017304.1 KEGG: gym:GYMC10_4794 legume lectin beta domain protein; TIGRFAM: conserved repeat domain protein; PFAM: S-layer domain-containing protein; hypothetical protein 2216749 12421629 Clo1313_1897 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688399.1 2214176 R 637887 CDS YP_005688400.1 385779235 12421630 complement(2217049..2217525) 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 2217525 12421630 Clo1313_1898 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005688400.1 2217049 R 637887 CDS YP_005688401.1 385779236 12421634 complement(2218097..2218270) 1 NC_017304.1 KEGG: cbr:CBG08354 Hypothetical protein CBG08354; hypothetical protein 2218270 12421634 Clo1313_1899 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688401.1 2218097 R 637887 CDS YP_005688402.1 385779237 12421635 2218348..2218551 1 NC_017304.1 manually curated; KEGG: hhe:HH1354 hypothetical protein; hypothetical protein 2218551 12421635 Clo1313_1900 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688402.1 2218348 D 637887 CDS YP_005688403.1 385779238 12421636 complement(2218618..2220555) 1 NC_017304.1 TIGRFAM: NAD+ synthetase; KEGG: cce:Ccel_1200 NAD synthetase; NAD+ synthetase 2220555 12421636 Clo1313_1901 Clostridium thermocellum DSM 1313 NAD+ synthetase YP_005688403.1 2218618 R 637887 CDS YP_005688404.1 385779239 12421637 complement(2220590..2223244) 1 NC_017304.1 KEGG: cce:Ccel_1199 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 2223244 12421637 Clo1313_1902 Clostridium thermocellum DSM 1313 valyl-tRNA synthetase YP_005688404.1 2220590 R 637887 CDS YP_005688405.1 385779240 12421638 complement(2223287..2223529) 1 NC_017304.1 KEGG: cce:Ccel_1198 hypothetical protein; hypothetical protein 2223529 12421638 Clo1313_1903 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688405.1 2223287 R 637887 CDS YP_005688406.1 385779241 12421639 2224106..2225440 1 NC_017304.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: amt:Amet_1301 glycoside hydrolase family 3 protein; glycoside hydrolase 2225440 12421639 Clo1313_1904 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688406.1 2224106 D 637887 CDS YP_005688407.1 385779242 12421640 complement(2225437..2226402) 1 NC_017304.1 KEGG: aae:aq_854 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 2226402 12421640 Clo1313_1905 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688407.1 2225437 R 637887 CDS YP_005688408.1 385779243 12421641 complement(2226535..2228001) 1 NC_017304.1 manually curated; KEGG: amt:Amet_0486 hypothetical protein; hypothetical protein 2228001 12421641 Clo1313_1906 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688408.1 2226535 R 637887 CDS YP_005688409.1 385779244 12421642 complement(2228047..2228691) 1 NC_017304.1 PFAM: class II aldolase/adducin family protein; KEGG: cpy:Cphy_1177 class II aldolase/adducin family protein; class II aldolase/adducin family protein 2228691 12421642 Clo1313_1907 Clostridium thermocellum DSM 1313 class II aldolase/adducin family protein YP_005688409.1 2228047 R 637887 CDS YP_005688410.1 385779245 12421643 2228943..2229635 1 NC_017304.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: cce:Ccel_1784 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2229635 12421643 Clo1313_1908 Clostridium thermocellum DSM 1313 ErfK/YbiS/YcfS/YnhG family protein YP_005688410.1 2228943 D 637887 CDS YP_005688411.1 385779246 12421644 2229777..2230448 1 NC_017304.1 KEGG: mjl:Mjls_3056 hypothetical protein; hypothetical protein 2230448 12421644 Clo1313_1909 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688411.1 2229777 D 637887 CDS YP_005688412.1 385779247 12421645 complement(2230554..2232488) 1 NC_017304.1 SMART: PA14 domain protein; KEGG: npu:Npun_F3469 PA14 domain-containing protein; PA14 domain-containing protein 2232488 12421645 Clo1313_1910 Clostridium thermocellum DSM 1313 PA14 domain-containing protein YP_005688412.1 2230554 R 637887 CDS YP_005688413.1 385779248 12421646 complement(2232481..2233230) 1 NC_017304.1 KEGG: cce:Ccel_1739 putative RNA polymerase sigma factor SigI; TIGRFAM: RNA polymerase sigma-I factor; PFAM: sigma-70 region 2 domain protein; RNA polymerase sigma-I factor 2233230 12421646 Clo1313_1911 Clostridium thermocellum DSM 1313 RNA polymerase sigma-I factor YP_005688413.1 2232481 R 637887 CDS YP_005688414.1 385779249 12421647 complement(2233411..2234631) 1 NC_017304.1 KEGG: ate:Athe_0423 glycosyltransferase 28-like protein; manually curated; PFAM: Glycosyltransferase 28 domain; Glycosyltransferase 28 domain 2234631 12421647 Clo1313_1912 Clostridium thermocellum DSM 1313 Glycosyltransferase 28 domain YP_005688414.1 2233411 R 637887 CDS YP_005688415.1 385779250 12421648 complement(2234715..2235743) 1 NC_017304.1 manually curated; KEGG: aoe:Clos_1172 hypothetical protein; hypothetical protein 2235743 12421648 Clo1313_1913 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688415.1 2234715 R 637887 CDS YP_005688416.1 385779251 12421649 complement(2236028..2238439) 1 NC_017304.1 KEGG: cce:Ccel_2116 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; ATPase 2238439 12421649 Clo1313_1914 Clostridium thermocellum DSM 1313 ATPase YP_005688416.1 2236028 R 637887 CDS YP_005688417.1 385779252 12421650 2238631..2239578 1 NC_017304.1 PFAM: transposase IS4 family protein; KEGG: llo:LLO_1884 transposase (DDE domain); transposase IS4 family protein 2239578 12421650 Clo1313_1915 Clostridium thermocellum DSM 1313 transposase IS4 family protein YP_005688417.1 2238631 D 637887 CDS YP_005688418.1 385779253 12421651 complement(2239945..2242773) 1 NC_017304.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: cce:Ccel_2119 excinuclease ABC, A subunit; SMART: AAA ATPase; excinuclease ABC subunit A 2242773 12421651 Clo1313_1916 Clostridium thermocellum DSM 1313 excinuclease ABC subunit A YP_005688418.1 2239945 R 637887 CDS YP_005688419.1 385779254 12421652 2243238..2244284 1 NC_017304.1 PFAM: 3D domain-containing protein; KEGG: aoe:Clos_2659 3D domain-containing protein; hypothetical protein 2244284 12421652 Clo1313_1917 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688419.1 2243238 D 637887 CDS YP_005688420.1 385779255 12421653 complement(2244310..2246292) 1 NC_017304.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: cce:Ccel_1413 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B 2246292 12421653 Clo1313_1918 Clostridium thermocellum DSM 1313 excinuclease ABC subunit B YP_005688420.1 2244310 R 637887 CDS YP_005688421.1 385779256 12421655 complement(2246798..2247157) 1 NC_017304.1 KEGG: ate:Athe_0160 hypothetical protein; hypothetical protein 2247157 12421655 Clo1313_1920 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688421.1 2246798 R 637887 CDS YP_005688422.1 385779257 12421656 complement(2247332..2249515) 1 NC_017304.1 PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: cce:Ccel_1399 DNA gyrase/topoisomerase IV subunit A; SMART: DNA gyrase/topoisomerase IV subunit A; DNA topoisomerase 2249515 12421656 Clo1313_1921 Clostridium thermocellum DSM 1313 DNA topoisomerase YP_005688422.1 2247332 R 637887 CDS YP_005688423.1 385779258 12421657 complement(2249590..2251575) 1 NC_017304.1 KEGG: cce:Ccel_1398 DNA gyrase subunit B domain protein; PFAM: DNA gyrase subunit B domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B domain-containing protein 2251575 12421657 Clo1313_1922 Clostridium thermocellum DSM 1313 DNA gyrase subunit B domain-containing protein YP_005688423.1 2249590 R 637887 CDS YP_005688424.1 385779259 12421658 2251931..2252377 1 NC_017304.1 KEGG: pfh:PFHG_02988 conserved hypothetical protein; hypothetical protein 2252377 12421658 Clo1313_1923 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688424.1 2251931 D 637887 CDS YP_005688425.1 385779260 12421659 2252464..2252658 1 NC_017304.1 KEGG: ppp:PHYPADRAFT_122756 hypothetical protein; hypothetical protein 2252658 12421659 Clo1313_1924 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688425.1 2252464 D 637887 CDS YP_005688426.1 385779261 12421660 complement(2252704..2253144) 1 NC_017304.1 KEGG: cbi:CLJ_B0534 hypothetical protein; hypothetical protein 2253144 12421660 Clo1313_1925 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688426.1 2252704 R 637887 CDS YP_005688427.1 385779262 12421661 complement(2253164..2253934) 1 NC_017304.1 PFAM: protein of unknown function DUF1212; KEGG: cce:Ccel_1520 protein of unknown function DUF1212; hypothetical protein 2253934 12421661 Clo1313_1926 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688427.1 2253164 R 637887 CDS YP_005688428.1 385779263 12421662 2254100..2254717 1 NC_017304.1 TIGRFAM: spore coat assembly protein SafA; PFAM: SCP-like extracellular; Peptidoglycan-binding lysin domain; KEGG: csc:Csac_1150 allergen V5/TPX-1 family protein; SMART: Peptidoglycan-binding LysM; spore coat assembly protein SafA 2254717 12421662 Clo1313_1927 Clostridium thermocellum DSM 1313 spore coat assembly protein SafA YP_005688428.1 2254100 D 637887 CDS YP_005688429.1 385779264 12421663 complement(2254817..2256187) 1 NC_017304.1 KEGG: gwc:GWCH70_0691 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 2256187 12421663 Clo1313_1928 Clostridium thermocellum DSM 1313 MATE efflux family protein YP_005688429.1 2254817 R 637887 CDS YP_005688430.1 385779265 12421664 complement(2256290..2258530) 1 NC_017304.1 KEGG: dae:Dtox_0613 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2258530 12421664 Clo1313_1929 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688430.1 2256290 R 637887 CDS YP_005688431.1 385779266 12421665 complement(2258610..2260085) 1 NC_017304.1 KEGG: cce:Ccel_2936 hypothetical protein; hypothetical protein 2260085 12421665 Clo1313_1930 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688431.1 2258610 R 637887 CDS YP_005688432.1 385779267 12421666 2260796..2261914 1 NC_017304.1 KEGG: mba:Mbar_A1294 phosphoserine aminotransferase; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 2261914 12421666 Clo1313_1931 Clostridium thermocellum DSM 1313 phosphoserine aminotransferase YP_005688432.1 2260796 D 637887 CDS YP_005688433.1 385779268 12421668 complement(2262777..2263220) 1 NC_017304.1 KEGG: mmx:MmarC6_0807 hypothetical protein; hypothetical protein 2263220 12421668 Clo1313_1933 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688433.1 2262777 R 637887 CDS YP_005688434.1 385779269 12421670 2264418..2265569 1 NC_017304.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: cce:Ccel_2178 transposase IS3/IS911 family protein; integrase catalytic subunit 2265569 12421670 Clo1313_1935 Clostridium thermocellum DSM 1313 integrase catalytic subunit YP_005688434.1 2264418 D 637887 CDS YP_005688435.1 385779270 12421671 2266955..2267401 1 NC_017304.1 KEGG: cai:Caci_3891 hypothetical protein; hypothetical protein 2267401 12421671 Clo1313_1936 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688435.1 2266955 D 637887 CDS YP_005688436.1 385779271 12421672 2267886..2269928 1 NC_017304.1 manually curated; KEGG: clj:CLJU_c18640 hypothetical protein; hypothetical protein 2269928 12421672 Clo1313_1937 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688436.1 2267886 D 637887 CDS YP_005688437.1 385779272 12421673 complement(2270220..2271506) 1 NC_017304.1 KEGG: amt:Amet_0566 homoserine dehydrogenase; manually curated; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; homoserine dehydrogenase 2271506 12421673 Clo1313_1938 Clostridium thermocellum DSM 1313 homoserine dehydrogenase YP_005688437.1 2270220 R 637887 CDS YP_005688438.1 385779273 12421674 complement(2271577..2273934) 1 NC_017304.1 SMART: helicase c2; KEGG: cce:Ccel_0660 DEAD_2 domain protein; helicase c2 2273934 12421674 Clo1313_1939 Clostridium thermocellum DSM 1313 helicase c2 YP_005688438.1 2271577 R 637887 CDS YP_005688439.1 385779274 12421675 complement(2274008..2275117) 1 NC_017304.1 SMART: MCP methyltransferase CheR-type; manually curated; KEGG: cvi:CV_1580 two-component hybrid sensor-regulator protein; PFAM: MCP methyltransferase CheR-type; chemotaxis protein CheR 2275117 12421675 Clo1313_1940 Clostridium thermocellum DSM 1313 chemotaxis protein CheR YP_005688439.1 2274008 R 637887 CDS YP_005688440.1 385779275 12421677 complement(2278801..2280075) 1 NC_017304.1 manually curated; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: clj:CLJU_c19760 putative sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase 2280075 12421677 Clo1313_1942 Clostridium thermocellum DSM 1313 response regulator receiver sensor signal transduction histidine kinase YP_005688440.1 2278801 R 637887 CDS YP_005688441.1 385779276 12421678 complement(2280209..2280316) 1 NC_017304.1 hypothetical protein 2280316 12421678 Clo1313_1943 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688441.1 2280209 R 637887 CDS YP_005688442.1 385779277 12421679 complement(2280317..2281525) 1 NC_017304.1 KEGG: tit:Thit_0372 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 2281525 12421679 Clo1313_1944 Clostridium thermocellum DSM 1313 isocitrate dehydrogenase YP_005688442.1 2280317 R 637887 CDS YP_005688443.1 385779278 12421680 complement(2281726..2283084) 1 NC_017304.1 KEGG: clj:CLJU_c26700 hypothetical protein; PFAM: protein of unknown function DUF815; AAA ATPase central domain protein; SMART: AAA ATPase; hypothetical protein 2283084 12421680 Clo1313_1945 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688443.1 2281726 R 637887 CDS YP_005688444.1 385779279 12421681 2283297..2284244 1 NC_017304.1 PFAM: aldo/keto reductase; KEGG: gtn:GTNG_1875 putative K+ channel, beta subunit; aldo/keto reductase 2284244 12421681 Clo1313_1946 Clostridium thermocellum DSM 1313 aldo/keto reductase YP_005688444.1 2283297 D 637887 CDS YP_005688445.1 385779280 12421682 complement(2284469..2285911) 1 NC_017304.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; KEGG: cce:Ccel_1334 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; glycogen/starch synthase 2285911 12421682 Clo1313_1947 Clostridium thermocellum DSM 1313 glycogen/starch synthase YP_005688445.1 2284469 R 637887 CDS YP_005688446.1 385779281 12421683 complement(2286218..2286526) 1 NC_017304.1 KEGG: clj:CLJU_c00560 putative spore coat protein F; manually curated; PFAM: Coat F domain protein; Coat F domain-containing protein 2286526 12421683 Clo1313_1948 Clostridium thermocellum DSM 1313 Coat F domain-containing protein YP_005688446.1 2286218 R 637887 CDS YP_005688447.1 385779282 12421684 complement(2286529..2286747) 1 NC_017304.1 KEGG: aoe:Clos_1643 hypothetical protein; hypothetical protein 2286747 12421684 Clo1313_1949 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688447.1 2286529 R 637887 CDS YP_005688448.1 385779283 12421685 complement(2286835..2287530) 1 NC_017304.1 PFAM: pseudouridine synthase; KEGG: aoe:Clos_0690 pseudouridine synthase; pseudouridine synthase 2287530 12421685 Clo1313_1950 Clostridium thermocellum DSM 1313 pseudouridine synthase YP_005688448.1 2286835 R 637887 CDS YP_005688449.1 385779284 12421686 complement(2287527..2288402) 1 NC_017304.1 KEGG: cce:Ccel_2432 hypothetical protein; hypothetical protein 2288402 12421686 Clo1313_1951 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688449.1 2287527 R 637887 CDS YP_005688450.1 385779285 12421687 2288745..2288858 1 NC_017304.1 hypothetical protein 2288858 12421687 Clo1313_1952 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688450.1 2288745 D 637887 CDS YP_005688451.1 385779286 12421688 complement(2288962..2289921) 1 NC_017304.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: saf:SULAZ_0219 glycerate dehydrogenase (NADH-dependent hydroxypyruvatereductase) (hpr) (gdh) (hydroxypyruvate dehydrogenase) (glyoxylatereductase) (hpr-a); D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2289921 12421688 Clo1313_1953 Clostridium thermocellum DSM 1313 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_005688451.1 2288962 R 637887 CDS YP_005688452.1 385779287 12421689 complement(2290186..2292621) 1 NC_017304.1 PFAM: glycosyltransferase 36; carbohydrate binding; glycosyltransferase 36 associated; KEGG: cce:Ccel_2109 glycosyltransferase 36; glycosyltransferase 2292621 12421689 Clo1313_1954 Clostridium thermocellum DSM 1313 glycosyltransferase YP_005688452.1 2290186 R 637887 CDS YP_005688453.1 385779288 12421690 2293191..2294882 1 NC_017304.1 PFAM: glycoside hydrolase family 9; Dockerin type 1; KEGG: cce:Ccel_0737 glycoside hydrolase family 9; glycoside hydrolase 2294882 12421690 Clo1313_1955 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688453.1 2293191 D 637887 CDS YP_005688454.1 385779289 12421691 2295124..2296728 1 NC_017304.1 TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GGDEF domain containing protein; KEGG: dtu:Dtur_1753 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; diguanylate cyclase and metal dependent phosphohydrolase 2296728 12421691 Clo1313_1956 Clostridium thermocellum DSM 1313 diguanylate cyclase and metal dependent phosphohydrolase YP_005688454.1 2295124 D 637887 CDS YP_005688455.1 385779290 12421692 2296870..2298024 1 NC_017304.1 KEGG: nth:Nther_1212 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase 2298024 12421692 Clo1313_1957 Clostridium thermocellum DSM 1313 serine-type D-Ala-D-Ala carboxypeptidase YP_005688455.1 2296870 D 637887 CDS YP_005688456.1 385779291 12421693 complement(2298154..2299080) 1 NC_017304.1 PFAM: type 3a cellulose-binding domain protein; KEGG: ate:Athe_1860 glycoside hydrolase family 48; type 3a cellulose-binding domain-containing protein 2299080 12421693 Clo1313_1958 Clostridium thermocellum DSM 1313 type 3a cellulose-binding domain-containing protein YP_005688456.1 2298154 R 637887 CDS YP_005688457.1 385779292 12421694 complement(2299297..2300751) 1 NC_017304.1 KEGG: cbf:CLI_2882 glycosy hydrolase family protein; PFAM: glycoside hydrolase family 18; Dockerin type 1; SMART: chitinase II; glycoside hydrolase 2300751 12421694 Clo1313_1959 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688457.1 2299297 R 637887 CDS YP_005688458.1 385779293 12421695 complement(2300898..2302331) 1 NC_017304.1 PFAM: glycoside hydrolase family 8; Dockerin type 1; KEGG: cce:Ccel_0730 glycoside hydrolase family 8; glycoside hydrolase 2302331 12421695 Clo1313_1960 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688458.1 2300898 R 637887 CDS YP_005688459.1 385779294 12421696 2302873..2303670 1 NC_017304.1 TIGRFAM: RNA polymerase sigma-I factor; KEGG: cce:Ccel_1739 putative RNA polymerase sigma factor SigI; RNA polymerase sigma-I factor 2303670 12421696 Clo1313_1961 Clostridium thermocellum DSM 1313 RNA polymerase sigma-I factor YP_005688459.1 2302873 D 637887 CDS YP_005688460.1 385779295 12421697 2303651..2305687 1 NC_017304.1 PFAM: type 3a cellulose-binding domain protein; KEGG: cme:CMH001C similar to hedgehog protein; type 3a cellulose-binding domain-containing protein 2305687 12421697 Clo1313_1962 Clostridium thermocellum DSM 1313 type 3a cellulose-binding domain-containing protein YP_005688460.1 2303651 D 637887 CDS YP_005688461.1 385779296 12421698 complement(2305800..2307287) 1 NC_017304.1 KEGG: cce:Ccel_2636 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2307287 12421698 Clo1313_1963 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688461.1 2305800 R 637887 CDS YP_005688462.1 385779297 12421699 complement(2307513..2308634) 1 NC_017304.1 KEGG: cbf:CLI_2086 aminotransferase, class V; PFAM: aminotransferase class V; alanine--glyoxylate transaminase 2308634 12421699 Clo1313_1964 Clostridium thermocellum DSM 1313 alanine--glyoxylate transaminase YP_005688462.1 2307513 R 637887 CDS YP_005688463.1 385779298 12421700 complement(2308885..2309310) 1 NC_017304.1 KEGG: cce:Ccel_2896 hypothetical protein; hypothetical protein 2309310 12421700 Clo1313_1965 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688463.1 2308885 R 637887 CDS YP_005688464.1 385779299 12421701 complement(2309411..2309782) 1 NC_017304.1 KEGG: cce:Ccel_2899 hypothetical protein; hypothetical protein 2309782 12421701 Clo1313_1966 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688464.1 2309411 R 637887 CDS YP_005688465.1 385779300 12421702 complement(2310048..2311343) 1 NC_017304.1 KEGG: pth:PTH_2594 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; gamma-glutamyl phosphate reductase 2311343 12421702 Clo1313_1967 Clostridium thermocellum DSM 1313 gamma-glutamyl phosphate reductase YP_005688465.1 2310048 R 637887 CDS YP_005688466.1 385779301 12421703 complement(2311402..2312055) 1 NC_017304.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: bfs:BF0931 putative haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 2312055 12421703 Clo1313_1968 Clostridium thermocellum DSM 1313 HAD-superfamily hydrolase YP_005688466.1 2311402 R 637887 CDS YP_005688467.1 385779302 12421704 complement(2312219..2314342) 1 NC_017304.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: pjd:Pjdr2_1276 copper amine oxidase domain protein; peptidase S1 and S6 chymotrypsin/Hap 2314342 12421704 Clo1313_1969 Clostridium thermocellum DSM 1313 peptidase S1 and S6 chymotrypsin/Hap YP_005688467.1 2312219 R 637887 CDS YP_005688468.1 385779303 12421705 complement(2314565..2315149) 1 NC_017304.1 PFAM: Rhomboid family protein; KEGG: aoe:Clos_1948 rhomboid family protein; rhomboid family protein 2315149 12421705 Clo1313_1970 Clostridium thermocellum DSM 1313 rhomboid family protein YP_005688468.1 2314565 R 637887 CDS YP_005688469.1 385779304 12421706 complement(2315173..2316582) 1 NC_017304.1 PFAM: Dockerin type 1; regulator of chromosome condensation RCC1; KEGG: mxa:MXAN_0889 RCC1 repeat-containing protein; Dockerin type 1 2316582 12421706 Clo1313_1971 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688469.1 2315173 R 637887 CDS YP_005688470.1 385779305 12421707 complement(2316713..2317765) 1 NC_017304.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: ckr:CKR_1232 hypothetical protein; SMART: AAA ATPase; twitching motility protein 2317765 12421707 Clo1313_1972 Clostridium thermocellum DSM 1313 twitching motility protein YP_005688470.1 2316713 R 637887 CDS YP_005688471.1 385779306 12421708 complement(2317888..2320026) 1 NC_017304.1 KEGG: scl:sce5204 phosphoserine phosphatase; PFAM: ATP-binding region ATPase domain protein; periplasmic binding protein/LacI transcriptional regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase 2320026 12421708 Clo1313_1973 Clostridium thermocellum DSM 1313 histidine kinase YP_005688471.1 2317888 R 637887 CDS YP_005688472.1 385779307 12421709 complement(2320211..2320834) 1 NC_017304.1 KEGG: mvu:Metvu_1335 hypothetical protein; hypothetical protein 2320834 12421709 Clo1313_1974 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688472.1 2320211 R 637887 CDS YP_005688473.1 385779308 12421710 complement(2320838..2322178) 1 NC_017304.1 PFAM: protein of unknown function DUF58; KEGG: mpd:MCP_1526 hypothetical protein; hypothetical protein 2322178 12421710 Clo1313_1975 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688473.1 2320838 R 637887 CDS YP_005688474.1 385779309 12421711 complement(2322179..2323168) 1 NC_017304.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: mpd:MCP_1527 putative AAA ATPase; ATPase 2323168 12421711 Clo1313_1976 Clostridium thermocellum DSM 1313 ATPase YP_005688474.1 2322179 R 637887 CDS YP_005688475.1 385779310 12421712 complement(2323125..2324276) 1 NC_017304.1 KEGG: mpd:MCP_1528 hypothetical protein; hypothetical protein 2324276 12421712 Clo1313_1977 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688475.1 2323125 R 637887 CDS YP_005688476.1 385779311 12421713 complement(2324294..2326834) 1 NC_017304.1 KEGG: afu:AF2400 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; transglutaminase domain-containing protein 2326834 12421713 Clo1313_1978 Clostridium thermocellum DSM 1313 transglutaminase domain-containing protein YP_005688476.1 2324294 R 637887 CDS YP_005688477.1 385779312 12421714 complement(2326909..2328099) 1 NC_017304.1 PFAM: protein of unknown function UPF0027; KEGG: aoe:Clos_1938 hypothetical protein; hypothetical protein 2328099 12421714 Clo1313_1979 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688477.1 2326909 R 637887 CDS YP_005688478.1 385779313 12421715 complement(2328133..2330541) 1 NC_017304.1 PFAM: peptidase C11 clostripain; KEGG: bld:BLi04029 hypothetical protein; peptidase C11 clostripain 2330541 12421715 Clo1313_1980 Clostridium thermocellum DSM 1313 peptidase C11 clostripain YP_005688478.1 2328133 R 637887 CDS YP_005688479.1 385779314 12421716 2330683..2331630 1 NC_017304.1 PFAM: transposase IS4 family protein; KEGG: llo:LLO_1884 transposase (DDE domain); transposase IS4 family protein 2331630 12421716 Clo1313_1981 Clostridium thermocellum DSM 1313 transposase IS4 family protein YP_005688479.1 2330683 D 637887 CDS YP_005688480.1 385779315 12421717 complement(2331782..2333587) 1 NC_017304.1 KEGG: swo:Swol_2027 MutS-like mismatch repair protein, ATPase; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; DNA mismatch repair protein MutS domain-containing protein 2333587 12421717 Clo1313_1982 Clostridium thermocellum DSM 1313 DNA mismatch repair protein MutS domain-containing protein YP_005688480.1 2331782 R 637887 CDS YP_005688481.1 385779316 12421718 complement(2333866..2336328) 1 NC_017304.1 PFAM: Carbohydrate binding family 6; Dockerin type 1; KEGG: cce:Ccel_0739 cellulosome protein dockerin type I; carbohydrate binding family protein 2336328 12421718 Clo1313_1983 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005688481.1 2333866 R 637887 CDS YP_005688482.1 385779317 12421719 2336577..2336954 1 NC_017304.1 KEGG: aoe:Clos_1085 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator 2336954 12421719 Clo1313_1984 Clostridium thermocellum DSM 1313 ArsR family transcriptional regulator YP_005688482.1 2336577 D 637887 CDS YP_005688483.1 385779318 12421720 2336956..2339079 1 NC_017304.1 KEGG: aoe:Clos_1087 heavy metal translocating P-type ATPase; TIGRFAM: cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; cadmium-translocating P-type ATPase 2339079 12421720 Clo1313_1985 Clostridium thermocellum DSM 1313 cadmium-translocating P-type ATPase YP_005688483.1 2336956 D 637887 CDS YP_005688484.1 385779319 12421721 complement(2339248..2340096) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; cell wall hydrolase SleB; KEGG: pjd:Pjdr2_1783 cell wall hydrolase SleB; copper amine oxidase-like domain-containing protein 2340096 12421721 Clo1313_1986 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688484.1 2339248 R 637887 CDS YP_005688485.1 385779320 12421722 2340744..2341643 1 NC_017304.1 KEGG: ckr:CKR_0931 hypothetical protein; hypothetical protein 2341643 12421722 Clo1313_1987 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688485.1 2340744 D 637887 CDS YP_005688486.1 385779321 12421723 complement(2341689..2342363) 1 NC_017304.1 KEGG: pjd:Pjdr2_6098 hypothetical protein; hypothetical protein 2342363 12421723 Clo1313_1988 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688486.1 2341689 R 637887 CDS YP_005688487.1 385779322 12421724 complement(2342327..2343109) 1 NC_017304.1 PFAM: VTC domain; KEGG: amt:Amet_1996 hypothetical protein; VTC domain-containing protein 2343109 12421724 Clo1313_1989 Clostridium thermocellum DSM 1313 VTC domain-containing protein YP_005688487.1 2342327 R 637887 CDS YP_005688488.1 385779323 12421725 complement(2343159..2346314) 1 NC_017304.1 PFAM: Spore coat protein CotH; Dockerin type 1; KEGG: amt:Amet_0190 spore coat protein CotH; spore coat protein CotH 2346314 12421725 Clo1313_1990 Clostridium thermocellum DSM 1313 spore coat protein CotH YP_005688488.1 2343159 R 637887 CDS YP_005688489.1 385779324 12421727 complement(2347025..2348155) 1 NC_017304.1 PFAM: aldo/keto reductase; KEGG: cce:Ccel_2503 aldo/keto reductase; aldo/keto reductase 2348155 12421727 Clo1313_1992 Clostridium thermocellum DSM 1313 aldo/keto reductase YP_005688489.1 2347025 R 637887 CDS YP_005688490.1 385779325 12421728 complement(2348606..2348836) 1 NC_017304.1 KEGG: dth:DICTH_1736 hypothetical protein; TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; glutaredoxin-like protein 2348836 12421728 Clo1313_1993 Clostridium thermocellum DSM 1313 glutaredoxin-like protein YP_005688490.1 2348606 R 637887 CDS YP_005688491.1 385779326 12421729 complement(2349089..2351620) 1 NC_017304.1 PFAM: AMP-dependent synthetase and ligase; Xylose isomerase domain-containing protein TIM barrel; KEGG: shi:Shel_17150 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; AMP-dependent synthetase and ligase 2351620 12421729 Clo1313_1994 Clostridium thermocellum DSM 1313 AMP-dependent synthetase and ligase YP_005688491.1 2349089 R 637887 CDS YP_005688492.1 385779327 12421730 complement(2352040..2352630) 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE1540 acetyltransferase; N-acetyltransferase GCN5 2352630 12421730 Clo1313_1995 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005688492.1 2352040 R 637887 CDS YP_005688493.1 385779328 12421731 complement(2352646..2353641) 1 NC_017304.1 KEGG: mpe:MYPE2130 cation-transporting P-type ATPase; hypothetical protein 2353641 12421731 Clo1313_1996 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688493.1 2352646 R 637887 CDS YP_005688494.1 385779329 12421732 complement(2353638..2354975) 1 NC_017304.1 KEGG: rci:RCIX1817 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2354975 12421732 Clo1313_1997 Clostridium thermocellum DSM 1313 radical SAM protein YP_005688494.1 2353638 R 637887 CDS YP_005688495.1 385779330 12421733 complement(2354972..2356678) 1 NC_017304.1 KEGG: nve:NEMVE_v1g69851 hypothetical protein; hypothetical protein 2356678 12421733 Clo1313_1998 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688495.1 2354972 R 637887 CDS YP_005688496.1 385779331 12421734 complement(2356826..2357845) 1 NC_017304.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: esi:Exig_2625 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2357845 12421734 Clo1313_1999 Clostridium thermocellum DSM 1313 NAD-dependent epimerase/dehydratase YP_005688496.1 2356826 R 637887 CDS YP_005688497.1 385779332 12421735 complement(2357953..2358393) 1 NC_017304.1 KEGG: btk:BT9727_3913 hypothetical protein; hypothetical protein 2358393 12421735 Clo1313_2000 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688497.1 2357953 R 637887 CDS YP_005688498.1 385779333 12421736 complement(2358518..2358862) 1 NC_017304.1 KEGG: ote:Oter_4297 hypothetical protein; hypothetical protein 2358862 12421736 Clo1313_2001 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688498.1 2358518 R 637887 CDS YP_005688499.1 385779334 12421737 complement(2359170..2359577) 1 NC_017304.1 KEGG: cpo:COPRO5265_0453 hypothetical protein; hypothetical protein 2359577 12421737 Clo1313_2002 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688499.1 2359170 R 637887 CDS YP_005688500.1 385779335 12421739 complement(2361554..2363293) 1 NC_017304.1 PFAM: UvrD/REP helicase; KEGG: bcx:BCA_A0188 DNA helicase; UvrD/REP helicase 2363293 12421739 Clo1313_2004 Clostridium thermocellum DSM 1313 UvrD/REP helicase YP_005688500.1 2361554 R 637887 CDS YP_005688501.1 385779336 12421740 complement(2363277..2365367) 1 NC_017304.1 PFAM: SMC domain protein; KEGG: bcx:BCA_A0189 RecF/RecN/SMC N domain protein; SMC domain-containing protein 2365367 12421740 Clo1313_2005 Clostridium thermocellum DSM 1313 SMC domain-containing protein YP_005688501.1 2363277 R 637887 CDS YP_005688502.1 385779337 12421741 complement(2365406..2366935) 1 NC_017304.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: tai:Taci_1642 ADP-ribosylation/crystallin J1; ADP-ribosylation/Crystallin J1 2366935 12421741 Clo1313_2006 Clostridium thermocellum DSM 1313 ADP-ribosylation/Crystallin J1 YP_005688502.1 2365406 R 637887 CDS YP_005688503.1 385779338 12421743 complement(2368116..2369339) 1 NC_017304.1 KEGG: tpd:Teth39_2032 transposase, mutator type; manually curated; PFAM: transposase mutator type; transposase mutator type 2369339 12421743 Clo1313_2008 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688503.1 2368116 R 637887 CDS YP_005688504.1 385779339 12421744 complement(2371295..2371558) 1 NC_017304.1 manually curated; KEGG: mmh:Mmah_0570 uncharacterized membrane-associated protein/domain protein; hypothetical protein 2371558 12421744 Clo1313_2009 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688504.1 2371295 R 637887 CDS YP_005688505.1 385779340 12421745 complement(2371555..2371899) 1 NC_017304.1 KEGG: vpr:Vpar_1664 S-layer domain protein; hypothetical protein 2371899 12421745 Clo1313_2010 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688505.1 2371555 R 637887 CDS YP_005688506.1 385779341 12421746 complement(2371899..2372024) 1 NC_017304.1 hypothetical protein 2372024 12421746 Clo1313_2011 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688506.1 2371899 R 637887 CDS YP_005688507.1 385779342 12421747 2372973..2373446 1 NC_017304.1 KEGG: lba:Lebu_0500 5-nitroimidazole antibiotic resistance protein; 5-nitroimidazole antibiotic resistance protein 2373446 12421747 Clo1313_2012 Clostridium thermocellum DSM 1313 5-nitroimidazole antibiotic resistance protein YP_005688507.1 2372973 D 637887 CDS YP_005688508.1 385779343 12421749 complement(2373923..2374087) 1 NC_017304.1 manually curated; KEGG: zpr:ZPR_2454 secreted protein; hypothetical protein 2374087 12421749 Clo1313_2013 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688508.1 2373923 R 637887 CDS YP_005688509.1 385779344 12421750 2374304..2375110 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: cce:Ccel_1418 metallophosphoesterase; metallophosphoesterase 2375110 12421750 Clo1313_2014 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005688509.1 2374304 D 637887 CDS YP_005688510.1 385779345 12421751 complement(2375250..2376596) 1 NC_017304.1 manually curated; KEGG: cce:Ccel_1445 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase 2376596 12421751 Clo1313_2015 Clostridium thermocellum DSM 1313 glucose-6-phosphate isomerase YP_005688510.1 2375250 R 637887 CDS YP_005688511.1 385779346 12421752 2376946..2377170 1 NC_017304.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: cce:Ccel_1444 small acid-soluble spore protein alpha/beta type; alpha/beta type small acid-soluble spore protein 2377170 12421752 Clo1313_2016 Clostridium thermocellum DSM 1313 alpha/beta type small acid-soluble spore protein YP_005688511.1 2376946 D 637887 CDS YP_005688512.1 385779347 12421753 complement(2377241..2379628) 1 NC_017304.1 KEGG: cno:NT01CX_1768 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 2379628 12421753 Clo1313_2017 Clostridium thermocellum DSM 1313 phenylalanyl-tRNA synthetase subunit beta YP_005688512.1 2377241 R 637887 CDS YP_005688513.1 385779348 12421754 complement(2379670..2380689) 1 NC_017304.1 KEGG: cno:NT01CX_1767 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 2380689 12421754 Clo1313_2018 Clostridium thermocellum DSM 1313 phenylalanyl-tRNA synthetase subunit alpha YP_005688513.1 2379670 R 637887 CDS YP_005688514.1 385779349 12421755 complement(2381161..2381934) 1 NC_017304.1 PFAM: protein of unknown function DUF975; KEGG: clj:CLJU_c32220 hypothetical protein; hypothetical protein 2381934 12421755 Clo1313_2019 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688514.1 2381161 R 637887 CDS YP_005688515.1 385779350 12421756 2382213..2383559 1 NC_017304.1 PFAM: glycoside hydrolase family 1; manually curated; KEGG: dtu:Dtur_1799 beta-galactosidase; TIGRFAM: beta-galactosidase; beta-galactosidase 2383559 12421756 Clo1313_2020 Clostridium thermocellum DSM 1313 beta-galactosidase YP_005688515.1 2382213 D 637887 CDS YP_005688516.1 385779351 12421757 complement(2383643..2383834) 1 NC_017304.1 KEGG: oaa:100075040 hypothetical protein LOC100075040; hypothetical protein 2383834 12421757 Clo1313_2021 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688516.1 2383643 R 637887 CDS YP_005688517.1 385779352 12421758 complement(2384124..2385128) 1 NC_017304.1 PFAM: glycoside hydrolase family 16; Dockerin type 1; KEGG: cac:CA_C2807 endo-1,3(4)-beta-glucanase family protein 16; glycoside hydrolase 2385128 12421758 Clo1313_2022 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688517.1 2384124 R 637887 CDS YP_005688518.1 385779353 12421759 2385491..2386552 1 NC_017304.1 KEGG: bha:BH3230 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2386552 12421759 Clo1313_2023 Clostridium thermocellum DSM 1313 LacI family transcriptional regulator YP_005688518.1 2385491 D 637887 CDS YP_005688519.1 385779354 12421760 complement(2386724..2387032) 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: dth:DICTH_0207 glycosyltransferase; family 2 glycosyl transferase 2387032 12421760 Clo1313_2024 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005688519.1 2386724 R 637887 CDS YP_005688520.1 385779355 12421762 complement(2389420..2390253) 1 NC_017304.1 manually curated; KEGG: clj:CLJU_c28390 hypothetical protein; hypothetical protein 2390253 12421762 Clo1313_2026 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688520.1 2389420 R 637887 CDS YP_005688521.1 385779356 12421763 complement(2390250..2392481) 1 NC_017304.1 PFAM: UvrD/REP helicase; KEGG: clj:CLJU_c28400 putative helicase; UvrD/REP helicase 2392481 12421763 Clo1313_2027 Clostridium thermocellum DSM 1313 UvrD/REP helicase YP_005688521.1 2390250 R 637887 CDS YP_005688522.1 385779357 12421764 complement(2392504..2394462) 1 NC_017304.1 KEGG: clj:CLJU_c28410 hypothetical protein; hypothetical protein 2394462 12421764 Clo1313_2028 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688522.1 2392504 R 637887 CDS YP_005688523.1 385779358 12421765 complement(2394753..2395040) 1 NC_017304.1 PFAM: protein of unknown function DUF1294; KEGG: cce:Ccel_2479 protein of unknown function DUF1294; hypothetical protein 2395040 12421765 Clo1313_2029 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688523.1 2394753 R 637887 CDS YP_005688524.1 385779359 12421766 complement(2395320..2395892) 1 NC_017304.1 PFAM: ANTAR domain protein; KEGG: dhd:Dhaf_0995 response regulator receiver and ANTAR domain protein; ANTAR domain-containing protein 2395892 12421766 Clo1313_2030 Clostridium thermocellum DSM 1313 ANTAR domain-containing protein YP_005688524.1 2395320 R 637887 CDS YP_005688525.1 385779360 12421767 complement(2395920..2397242) 1 NC_017304.1 manually curated; TIGRFAM: glutamine synthetase, type I; KEGG: dhd:Dhaf_0994 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I 2397242 12421767 Clo1313_2031 Clostridium thermocellum DSM 1313 glutamine synthetase, type I YP_005688525.1 2395920 R 637887 CDS YP_005688526.1 385779361 12421768 complement(2397275..2397997) 1 NC_017304.1 KEGG: tmt:Tmath_1316 glutamate synthase alpha subunit domain protein; manually curated; PFAM: glutamate synthase alpha subunit domain protein; glutamate synthase subunit alpha domain-containing protein 2397997 12421768 Clo1313_2032 Clostridium thermocellum DSM 1313 glutamate synthase subunit alpha domain-containing protein YP_005688526.1 2397275 R 637887 CDS YP_005688527.1 385779362 12421769 complement(2397994..2399229) 1 NC_017304.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ate:Athe_2358 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2399229 12421769 Clo1313_2033 Clostridium thermocellum DSM 1313 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005688527.1 2397994 R 637887 CDS YP_005688528.1 385779363 12421770 complement(2399234..2399662) 1 NC_017304.1 KEGG: dth:DICTH_0169 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 2399662 12421770 Clo1313_2034 Clostridium thermocellum DSM 1313 iron-sulfur cluster-binding protein YP_005688528.1 2399234 R 637887 CDS YP_005688529.1 385779364 12421771 complement(2399676..2401181) 1 NC_017304.1 KEGG: rsd:TGRD_159 glutamate synthase large subunit GltB FMN-binding component; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase 2401181 12421771 Clo1313_2035 Clostridium thermocellum DSM 1313 glutamate synthase YP_005688529.1 2399676 R 637887 CDS YP_005688530.1 385779365 12421772 complement(2401181..2402272) 1 NC_017304.1 PFAM: glutamine amidotransferase class-II; KEGG: tjr:TherJR_0711 glutamine amidotransferase class-II; glutamine amidotransferase 2402272 12421772 Clo1313_2036 Clostridium thermocellum DSM 1313 glutamine amidotransferase YP_005688530.1 2401181 R 637887 CDS YP_005688531.1 385779366 12421774 2402864..2404957 1 NC_017304.1 PFAM: glutamine synthetase catalytic region; KEGG: brm:Bmur_0085 glutamine synthetase catalytic region; glutamine synthetase 2404957 12421774 Clo1313_2038 Clostridium thermocellum DSM 1313 glutamine synthetase YP_005688531.1 2402864 D 637887 CDS YP_005688532.1 385779367 12421776 complement(2405831..2406214) 1 NC_017304.1 KEGG: car:cauri_0465 hypothetical protein; hypothetical protein 2406214 12421776 Clo1313_2040 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688532.1 2405831 R 637887 CDS YP_005688533.1 385779368 12421777 complement(2406303..2407487) 1 NC_017304.1 PFAM: sodium/hydrogen exchanger; KEGG: ctc:CTC02161 putative Na(+)/H(+) antiporter; sodium/hydrogen exchanger 2407487 12421777 Clo1313_2041 Clostridium thermocellum DSM 1313 sodium/hydrogen exchanger YP_005688533.1 2406303 R 637887 CDS YP_005688534.1 385779369 12421780 complement(2408038..2409837) 1 NC_017304.1 KEGG: amt:Amet_2165 proteinase inhibitor I4, serpin; PFAM: proteinase inhibitor I4 serpin; Dockerin type 1; SMART: proteinase inhibitor I4 serpin; proteinase inhibitor I4 serpin 2409837 12421780 Clo1313_2042 Clostridium thermocellum DSM 1313 proteinase inhibitor I4 serpin YP_005688534.1 2408038 R 637887 CDS YP_005688535.1 385779370 12421781 complement(2410268..2412070) 1 NC_017304.1 KEGG: amt:Amet_2165 proteinase inhibitor I4, serpin; PFAM: proteinase inhibitor I4 serpin; Dockerin type 1; SMART: proteinase inhibitor I4 serpin; proteinase inhibitor I4 serpin 2412070 12421781 Clo1313_2043 Clostridium thermocellum DSM 1313 proteinase inhibitor I4 serpin YP_005688535.1 2410268 R 637887 CDS YP_005688536.1 385779371 12421782 complement(2412487..2413086) 1 NC_017304.1 KEGG: cce:Ccel_1353 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2413086 12421782 Clo1313_2044 Clostridium thermocellum DSM 1313 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_005688536.1 2412487 R 637887 CDS YP_005688537.1 385779372 12421783 complement(2413043..2413834) 1 NC_017304.1 PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; manually curated; KEGG: ate:Athe_0837 ribonuclease PH; TIGRFAM: ribonuclease PH; ribonuclease PH 2413834 12421783 Clo1313_2045 Clostridium thermocellum DSM 1313 ribonuclease PH YP_005688537.1 2413043 R 637887 CDS YP_005688538.1 385779373 12421784 complement(2413902..2415074) 1 NC_017304.1 KEGG: cce:Ccel_1351 hypothetical protein; manually curated; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, GerMN domain 2415074 12421784 Clo1313_2046 Clostridium thermocellum DSM 1313 Lipoprotein LpqB, GerMN domain YP_005688538.1 2413902 R 637887 CDS YP_005688539.1 385779374 12421785 complement(2415177..2416166) 1 NC_017304.1 manually curated; TIGRFAM: UDP-glucose 4-epimerase; KEGG: cce:Ccel_3237 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 2416166 12421785 Clo1313_2047 Clostridium thermocellum DSM 1313 UDP-glucose 4-epimerase YP_005688539.1 2415177 R 637887 CDS YP_005688540.1 385779375 12421786 complement(2416381..2419227) 1 NC_017304.1 KEGG: cce:Ccel_1350 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 2419227 12421786 Clo1313_2048 Clostridium thermocellum DSM 1313 cell wall hydrolase/autolysin YP_005688540.1 2416381 R 637887 CDS YP_005688541.1 385779376 12421787 complement(2419537..2420640) 1 NC_017304.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: cce:Ccel_2409 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 2420640 12421787 Clo1313_2049 Clostridium thermocellum DSM 1313 type IV pilus assembly protein PilM YP_005688541.1 2419537 R 637887 CDS YP_005688542.1 385779377 12421788 complement(2420781..2421326) 1 NC_017304.1 PFAM: protein of unknown function DUF208; KEGG: cce:Ccel_1349 protein of unknown function DUF208; hypothetical protein 2421326 12421788 Clo1313_2050 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688542.1 2420781 R 637887 CDS YP_005688543.1 385779378 12421789 complement(2421395..2422387) 1 NC_017304.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: cce:Ccel_1348 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 2422387 12421789 Clo1313_2051 Clostridium thermocellum DSM 1313 Holliday junction DNA helicase RuvB YP_005688543.1 2421395 R 637887 CDS YP_005688544.1 385779379 12421790 complement(2422486..2423094) 1 NC_017304.1 KEGG: cce:Ccel_1347 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; Holliday junction DNA helicase RuvA 2423094 12421790 Clo1313_2052 Clostridium thermocellum DSM 1313 Holliday junction DNA helicase RuvA YP_005688544.1 2422486 R 637887 CDS YP_005688545.1 385779380 12421791 complement(2423140..2423628) 1 NC_017304.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: cce:Ccel_1346 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 2423628 12421791 Clo1313_2053 Clostridium thermocellum DSM 1313 crossover junction endodeoxyribonuclease RuvC YP_005688545.1 2423140 R 637887 CDS YP_005688546.1 385779381 12421792 2423864..2425081 1 NC_017304.1 PFAM: argininosuccinate synthase; manually curated; KEGG: cce:Ccel_1345 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 2425081 12421792 Clo1313_2054 Clostridium thermocellum DSM 1313 argininosuccinate synthase YP_005688546.1 2423864 D 637887 CDS YP_005688547.1 385779382 12421793 2425091..2426467 1 NC_017304.1 KEGG: cce:Ccel_1344 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 2426467 12421793 Clo1313_2055 Clostridium thermocellum DSM 1313 argininosuccinate lyase YP_005688547.1 2425091 D 637887 CDS YP_005688548.1 385779383 12421794 complement(2426593..2426790) 1 NC_017304.1 KEGG: smr:Smar_1481 metal-dependent phosphohydrolase, HD region; metal-dependent phosphohydrolase, HD region 2426790 12421794 Clo1313_2056 Clostridium thermocellum DSM 1313 metal-dependent phosphohydrolase, HD region YP_005688548.1 2426593 R 637887 CDS YP_005688549.1 385779384 12421795 complement(2426961..2427311) 1 NC_017304.1 KEGG: cce:Ccel_1342 hypothetical protein; hypothetical protein 2427311 12421795 Clo1313_2057 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688549.1 2426961 R 637887 CDS YP_005688550.1 385779385 12421796 complement(2427592..2428728) 1 NC_017304.1 PFAM: polysaccharide deacetylase; KEGG: cce:Ccel_1341 polysaccharide deacetylase; polysaccharide deacetylase 2428728 12421796 Clo1313_2058 Clostridium thermocellum DSM 1313 polysaccharide deacetylase YP_005688550.1 2427592 R 637887 CDS YP_005688551.1 385779386 12421797 complement(2428912..2430804) 1 NC_017304.1 PFAM: sulfatase; KEGG: cbb:CLD_0162 sulfatase family protein; sulfatase 2430804 12421797 Clo1313_2059 Clostridium thermocellum DSM 1313 sulfatase YP_005688551.1 2428912 R 637887 CDS YP_005688552.1 385779387 12421798 complement(2430986..2432080) 1 NC_017304.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dae:Dtox_3923 dehydrogenase (flavoprotein)-like protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2432080 12421798 Clo1313_2060 Clostridium thermocellum DSM 1313 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005688552.1 2430986 R 637887 CDS YP_005688553.1 385779388 12421799 2432248..2432463 1 NC_017304.1 KEGG: drm:Dred_1246 hypothetical protein; hypothetical protein 2432463 12421799 Clo1313_2061 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688553.1 2432248 D 637887 CDS YP_005688554.1 385779389 12421800 2432490..2432729 1 NC_017304.1 KEGG: dae:Dtox_2951 hypothetical protein; hypothetical protein 2432729 12421800 Clo1313_2062 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688554.1 2432490 D 637887 CDS YP_005688555.1 385779390 12421801 2432776..2433228 1 NC_017304.1 KEGG: tpd:Teth39_0560 hypothetical protein; hypothetical protein 2433228 12421801 Clo1313_2063 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688555.1 2432776 D 637887 CDS YP_005688556.1 385779391 12421802 2433319..2434401 1 NC_017304.1 PFAM: FAD dependent oxidoreductase; KEGG: tit:Thit_0239 dehydrogenase (flavoprotein)-like protein; FAD dependent oxidoreductase 2434401 12421802 Clo1313_2064 Clostridium thermocellum DSM 1313 FAD dependent oxidoreductase YP_005688556.1 2433319 D 637887 CDS YP_005688557.1 385779392 12421803 complement(2434413..2434883) 1 NC_017304.1 KEGG: ssp:SSP0923 putative ABC-type polysaccharide polyol phosphate export system permease component; hypothetical protein 2434883 12421803 Clo1313_2065 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688557.1 2434413 R 637887 CDS YP_005688558.1 385779393 12421804 complement(2434936..2435304) 1 NC_017304.1 KEGG: ckr:CKR_0396 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 2435304 12421804 Clo1313_2066 Clostridium thermocellum DSM 1313 response regulator receiver YP_005688558.1 2434936 R 637887 CDS YP_005688559.1 385779394 12421805 complement(2435342..2436022) 1 NC_017304.1 KEGG: tit:Thit_0752 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2436022 12421805 Clo1313_2067 Clostridium thermocellum DSM 1313 4Fe-4S ferredoxin YP_005688559.1 2435342 R 637887 CDS YP_005688560.1 385779395 12421806 2436330..2436887 1 NC_017304.1 KEGG: cce:Ccel_1326 hypothetical protein; hypothetical protein 2436887 12421806 Clo1313_2068 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688560.1 2436330 D 637887 CDS YP_005688561.1 385779396 12421807 complement(2436973..2437263) 1 NC_017304.1 PFAM: protein of unknown function UPF0044; KEGG: cce:Ccel_1324 protein of unknown function UPF0044; hypothetical protein 2437263 12421807 Clo1313_2069 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688561.1 2436973 R 637887 CDS YP_005688562.1 385779397 12421808 complement(2437357..2437581) 1 NC_017304.1 KEGG: ate:Athe_1122 hypothetical protein; hypothetical protein 2437581 12421808 Clo1313_2070 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688562.1 2437357 R 637887 CDS YP_005688563.1 385779398 12421809 complement(2437695..2438969) 1 NC_017304.1 KEGG: cce:Ccel_1323 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; GTP-binding protein Obg/CgtA 2438969 12421809 Clo1313_2071 Clostridium thermocellum DSM 1313 GTP-binding protein Obg/CgtA YP_005688563.1 2437695 R 637887 CDS YP_005688564.1 385779399 12421810 complement(2439078..2439356) 1 NC_017304.1 KEGG: cce:Ccel_1322 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 2439356 12421810 Clo1313_2072 Clostridium thermocellum DSM 1313 50S ribosomal protein L27 YP_005688564.1 2439078 R 637887 CDS YP_005688565.1 385779400 12421811 complement(2439349..2439690) 1 NC_017304.1 PFAM: protein of unknown function DUF464; KEGG: cce:Ccel_1321 hypothetical protein; hypothetical protein 2439690 12421811 Clo1313_2073 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688565.1 2439349 R 637887 CDS YP_005688566.1 385779401 12421812 complement(2439703..2440014) 1 NC_017304.1 KEGG: cce:Ccel_1320 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 2440014 12421812 Clo1313_2074 Clostridium thermocellum DSM 1313 50S ribosomal protein L21 YP_005688566.1 2439703 R 637887 CDS YP_005688567.1 385779402 12421813 complement(2440121..2441593) 1 NC_017304.1 KEGG: cce:Ccel_1319 ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 2441593 12421813 Clo1313_2075 Clostridium thermocellum DSM 1313 ribonuclease, Rne/Rng family YP_005688567.1 2440121 R 637887 CDS YP_005688568.1 385779403 12421814 complement(2441625..2442464) 1 NC_017304.1 PFAM: Protein of unknown function DUF2344; KEGG: cce:Ccel_1318 hypothetical protein; hypothetical protein 2442464 12421814 Clo1313_2076 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688568.1 2441625 R 637887 CDS YP_005688569.1 385779404 12421815 complement(2442454..2444295) 1 NC_017304.1 KEGG: cce:Ccel_1317 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2444295 12421815 Clo1313_2077 Clostridium thermocellum DSM 1313 radical SAM protein YP_005688569.1 2442454 R 637887 CDS YP_005688570.1 385779405 12421816 complement(2444534..2445595) 1 NC_017304.1 KEGG: aoe:Clos_1250 hypothetical protein; hypothetical protein 2445595 12421816 Clo1313_2078 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688570.1 2444534 R 637887 CDS YP_005688571.1 385779406 12421817 complement(2445765..2446055) 1 NC_017304.1 PFAM: protein of unknown function DUF1292; KEGG: cce:Ccel_2238 protein of unknown function DUF1292; hypothetical protein 2446055 12421817 Clo1313_2079 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688571.1 2445765 R 637887 CDS YP_005688572.1 385779407 12421818 complement(2446158..2446583) 1 NC_017304.1 KEGG: cce:Ccel_2239 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF 2446583 12421818 Clo1313_2080 Clostridium thermocellum DSM 1313 Holliday junction resolvase YqgF YP_005688572.1 2446158 R 637887 CDS YP_005688573.1 385779408 12421819 complement(2446705..2447652) 1 NC_017304.1 PFAM: aldo/keto reductase; KEGG: drm:Dred_0774 aldo/keto reductase; aldo/keto reductase 2447652 12421819 Clo1313_2081 Clostridium thermocellum DSM 1313 aldo/keto reductase YP_005688573.1 2446705 R 637887 CDS YP_005688574.1 385779409 12421820 complement(2447730..2448002) 1 NC_017304.1 PFAM: protein of unknown function DUF965; KEGG: cce:Ccel_2240 hypothetical protein; hypothetical protein 2448002 12421820 Clo1313_2082 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688574.1 2447730 R 637887 CDS YP_005688575.1 385779410 12421821 complement(2448217..2449521) 1 NC_017304.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: cce:Ccel_2241 RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 2449521 12421821 Clo1313_2083 Clostridium thermocellum DSM 1313 MiaB family RNA modification protein YP_005688575.1 2448217 R 637887 CDS YP_005688576.1 385779411 12421822 2449680..2449907 1 NC_017304.1 KEGG: cce:Ccel_2245 HPrNtr domain-containing protein; manually curated; PFAM: phosphoryl transfer system HPr; phosphoryl transfer system HPr 2449907 12421822 Clo1313_2084 Clostridium thermocellum DSM 1313 phosphoryl transfer system HPr YP_005688576.1 2449680 D 637887 CDS YP_005688577.1 385779412 12421823 complement(2450037..2450504) 1 NC_017304.1 KEGG: cbb:CLD_1419 hypothetical protein; manually curated; PFAM: protein of unknown function DUF523; hypothetical protein 2450504 12421823 Clo1313_2085 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688577.1 2450037 R 637887 CDS YP_005688578.1 385779413 12421824 complement(2450513..2452786) 1 NC_017304.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; KEGG: cce:Ccel_2247 ribonuclease R; SMART: Cold shock protein; ribonuclease R 2452786 12421824 Clo1313_2086 Clostridium thermocellum DSM 1313 ribonuclease R YP_005688578.1 2450513 R 637887 CDS YP_005688579.1 385779414 12421825 complement(2453035..2453511) 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 2453511 12421825 Clo1313_2087 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005688579.1 2453035 R 637887 CDS YP_005688580.1 385779415 12421826 complement(2453710..2454261) 1 NC_017304.1 KEGG: ate:Athe_2109 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal dependent phosphohydrolase 2454261 12421826 Clo1313_2088 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005688580.1 2453710 R 637887 CDS YP_005688581.1 385779416 12421827 complement(2454543..2454782) 1 NC_017304.1 KEGG: cce:Ccel_2253 preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 2454782 12421827 Clo1313_2089 Clostridium thermocellum DSM 1313 preprotein translocase subunit SecG YP_005688581.1 2454543 R 637887 CDS YP_005688582.1 385779417 12421828 complement(2454958..2456259) 1 NC_017304.1 TIGRFAM: enolase; KEGG: cce:Ccel_2254 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 2456259 12421828 Clo1313_2090 Clostridium thermocellum DSM 1313 enolase YP_005688582.1 2454958 R 637887 CDS YP_005688583.1 385779418 12421829 complement(2456459..2458096) 1 NC_017304.1 SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; manually curated; TIGRFAM: diguanylate cyclase; KEGG: drm:Dred_0910 metal dependent phosphohydrolase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; diguanylate cyclase and metal dependent phosphohydrolase 2458096 12421829 Clo1313_2091 Clostridium thermocellum DSM 1313 diguanylate cyclase and metal dependent phosphohydrolase YP_005688583.1 2456459 R 637887 CDS YP_005688584.1 385779419 12421830 complement(2458434..2459969) 1 NC_017304.1 PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; manually curated; KEGG: cce:Ccel_2259 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; phosphoglycerate mutase 2459969 12421830 Clo1313_2092 Clostridium thermocellum DSM 1313 phosphoglycerate mutase YP_005688584.1 2458434 R 637887 CDS YP_005688585.1 385779420 12421831 complement(2460156..2460911) 1 NC_017304.1 TIGRFAM: triosephosphate isomerase; KEGG: cce:Ccel_2260 bifunctional phosphoglycerate kinase/triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 2460911 12421831 Clo1313_2093 Clostridium thermocellum DSM 1313 triosephosphate isomerase YP_005688585.1 2460156 R 637887 CDS YP_005688586.1 385779421 12421832 complement(2460926..2462119) 1 NC_017304.1 KEGG: cce:Ccel_2260 bifunctional phosphoglycerate kinase/triosephosphate isomerase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase 2462119 12421832 Clo1313_2094 Clostridium thermocellum DSM 1313 phosphoglycerate kinase YP_005688586.1 2460926 R 637887 CDS YP_005688587.1 385779422 12421833 complement(2462454..2463464) 1 NC_017304.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cce:Ccel_2275 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 2463464 12421833 Clo1313_2095 Clostridium thermocellum DSM 1313 glyceraldehyde-3-phosphate dehydrogenase, type I YP_005688587.1 2462454 R 637887 CDS YP_005688588.1 385779423 12421834 complement(2463728..2464453) 1 NC_017304.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: dps:DP0914 hypothetical protein; 4'-phosphopantetheinyl transferase 2464453 12421834 Clo1313_2096 Clostridium thermocellum DSM 1313 4'-phosphopantetheinyl transferase YP_005688588.1 2463728 R 637887 CDS YP_005688589.1 385779424 12421835 complement(2464450..2472714) 1 NC_017304.1 PFAM: Beta-ketoacyl synthase ; Acyl transferase; short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_3077 beta-ketoacyl synthase; beta-ketoacyl synthase 2472714 12421835 Clo1313_2097 Clostridium thermocellum DSM 1313 beta-ketoacyl synthase YP_005688589.1 2464450 R 637887 CDS YP_005688590.1 385779425 12421836 complement(2472763..2473734) 1 NC_017304.1 KEGG: bcg:BCG9842_0006 YdjC; hypothetical protein 2473734 12421836 Clo1313_2098 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688590.1 2472763 R 637887 CDS YP_005688591.1 385779426 12421837 complement(2473755..2475239) 1 NC_017304.1 PFAM: AMP-dependent synthetase and ligase; KEGG: npu:Npun_R2067 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2475239 12421837 Clo1313_2099 Clostridium thermocellum DSM 1313 AMP-dependent synthetase and ligase YP_005688591.1 2473755 R 637887 CDS YP_005688592.1 385779427 12421838 complement(2475278..2476315) 1 NC_017304.1 KEGG: xca:xccb100_3342 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; beta-ketoacyl-acyl-carrier-protein synthase I 2476315 12421838 Clo1313_2100 Clostridium thermocellum DSM 1313 beta-ketoacyl-acyl-carrier-protein synthase I YP_005688592.1 2475278 R 637887 CDS YP_005688593.1 385779428 12421839 complement(2476457..2476702) 1 NC_017304.1 PFAM: phosphopantetheine-binding; KEGG: gdj:Gdia_3407 acyl carrier protein; phosphopantetheine-binding protein 2476702 12421839 Clo1313_2101 Clostridium thermocellum DSM 1313 phosphopantetheine-binding protein YP_005688593.1 2476457 R 637887 CDS YP_005688594.1 385779429 12421840 complement(2476815..2477849) 1 NC_017304.1 KEGG: mca:MCA2003 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; beta-ketoacyl-acyl-carrier-protein synthase I 2477849 12421840 Clo1313_2102 Clostridium thermocellum DSM 1313 beta-ketoacyl-acyl-carrier-protein synthase I YP_005688594.1 2476815 R 637887 CDS YP_005688595.1 385779430 12421841 complement(2478054..2479571) 1 NC_017304.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; KEGG: cby:CLM_0401 GGDEF/HD domain protein; SMART: GGDEF domain containing protein; metal-dependent phosphohydrolase HD region; diguanylate cyclase and metal dependent phosphohydrolase 2479571 12421841 Clo1313_2103 Clostridium thermocellum DSM 1313 diguanylate cyclase and metal dependent phosphohydrolase YP_005688595.1 2478054 R 637887 CDS YP_005688596.1 385779431 12421842 complement(2479907..2480401) 1 NC_017304.1 KEGG: cce:Ccel_2278 tRNA/rRNA methyltransferase (SpoU); TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 2480401 12421842 Clo1313_2104 Clostridium thermocellum DSM 1313 TrmH family RNA methyltransferase YP_005688596.1 2479907 R 637887 CDS YP_005688597.1 385779432 12421843 complement(2480531..2480995) 1 NC_017304.1 PFAM: CheC domain protein; KEGG: cce:Ccel_2279 CheC domain protein; chemotaxis protein CheC 2480995 12421843 Clo1313_2105 Clostridium thermocellum DSM 1313 chemotaxis protein CheC YP_005688597.1 2480531 R 637887 CDS YP_005688598.1 385779433 12421844 complement(2481069..2481647) 1 NC_017304.1 KEGG: tjr:TherJR_1651 stage V sporulation protein ae; stage V sporulation protein ae 2481647 12421844 Clo1313_2106 Clostridium thermocellum DSM 1313 stage V sporulation protein ae YP_005688598.1 2481069 R 637887 CDS YP_005688599.1 385779434 12421845 complement(2481709..2482080) 1 NC_017304.1 KEGG: cce:Ccel_2280 stage V sporulation protein AE; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; stage V sporulation protein AE 2482080 12421845 Clo1313_2107 Clostridium thermocellum DSM 1313 stage V sporulation protein AE YP_005688599.1 2481709 R 637887 CDS YP_005688600.1 385779435 12421846 complement(2482124..2483146) 1 NC_017304.1 KEGG: cce:Ccel_2281 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; stage V sporulation protein AD 2483146 12421846 Clo1313_2108 Clostridium thermocellum DSM 1313 stage V sporulation protein AD YP_005688600.1 2482124 R 637887 CDS YP_005688601.1 385779436 12421847 complement(2483205..2483648) 1 NC_017304.1 KEGG: cce:Ccel_2282 stage V sporulation protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; stage V sporulation protein AC 2483648 12421847 Clo1313_2109 Clostridium thermocellum DSM 1313 stage V sporulation protein AC YP_005688601.1 2483205 R 637887 CDS YP_005688602.1 385779437 12421848 complement(2483668..2483856) 1 NC_017304.1 hypothetical protein 2483856 12421848 Clo1313_2110 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688602.1 2483668 R 637887 CDS YP_005688603.1 385779438 12421849 complement(2484040..2484786) 1 NC_017304.1 KEGG: cce:Ccel_2284 RNA polymerase, sigma 28 subunit, SigF; TIGRFAM: RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 28 subunit SigF 2484786 12421849 Clo1313_2111 Clostridium thermocellum DSM 1313 RNA polymerase sigma 28 subunit SigF YP_005688603.1 2484040 R 637887 CDS YP_005688604.1 385779439 12421850 complement(2484817..2485266) 1 NC_017304.1 SMART: ATP-binding region ATPase domain protein; TIGRFAM: anti-sigma F factor; KEGG: cce:Ccel_2285 anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein; anti-sigma regulatory factor, serine/threonine protein kinase 2485266 12421850 Clo1313_2112 Clostridium thermocellum DSM 1313 anti-sigma regulatory factor, serine/threonine protein kinase YP_005688604.1 2484817 R 637887 CDS YP_005688605.1 385779440 12421851 complement(2485280..2485615) 1 NC_017304.1 KEGG: cce:Ccel_2286 anti-sigma-factor antagonist; TIGRFAM: anti-sigma F factor antagonist; anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2485615 12421851 Clo1313_2113 Clostridium thermocellum DSM 1313 anti-sigma-factor antagonist YP_005688605.1 2485280 R 637887 CDS YP_005688606.1 385779441 12421852 complement(2485806..2486072) 1 NC_017304.1 KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 2486072 12421852 Clo1313_2114 Clostridium thermocellum DSM 1313 phosphotransferase system, phosphocarrier protein HPr YP_005688606.1 2485806 R 637887 CDS YP_005688607.1 385779442 12421853 complement(2486075..2487028) 1 NC_017304.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: amt:Amet_4088 hypothetical protein; hypothetical protein 2487028 12421853 Clo1313_2115 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688607.1 2486075 R 637887 CDS YP_005688608.1 385779443 12421854 complement(2487103..2489082) 1 NC_017304.1 TIGRFAM: glycogen debranching enzyme; KEGG: cce:Ccel_2288 glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; glycogen debranching protein 2489082 12421854 Clo1313_2116 Clostridium thermocellum DSM 1313 glycogen debranching protein YP_005688608.1 2487103 R 637887 CDS YP_005688609.1 385779444 12421855 complement(2489109..2490428) 1 NC_017304.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: cce:Ccel_2289 protein of unknown function UPF0052 and CofD; hypothetical protein 2490428 12421855 Clo1313_2117 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688609.1 2489109 R 637887 CDS YP_005688610.1 385779445 12421856 complement(2490425..2491300) 1 NC_017304.1 KEGG: cce:Ccel_2290 hypothetical protein; hypothetical protein 2491300 12421856 Clo1313_2118 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688610.1 2490425 R 637887 CDS YP_005688611.1 385779446 12421857 complement(2491339..2492253) 1 NC_017304.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: cce:Ccel_2291 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 2492253 12421857 Clo1313_2119 Clostridium thermocellum DSM 1313 UDP-N-acetylenolpyruvoylglucosamine reductase YP_005688611.1 2491339 R 637887 CDS YP_005688612.1 385779447 12421858 complement(2492366..2493091) 1 NC_017304.1 KEGG: cce:Ccel_2292 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein 2493091 12421858 Clo1313_2120 Clostridium thermocellum DSM 1313 PHP domain-containing protein YP_005688612.1 2492366 R 637887 CDS YP_005688613.1 385779448 12421859 complement(2493125..2494081) 1 NC_017304.1 KEGG: cce:Ccel_2293 HPr kinase; TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain-containing protein; HPr kinase 2494081 12421859 Clo1313_2121 Clostridium thermocellum DSM 1313 HPr kinase YP_005688613.1 2493125 R 637887 CDS YP_005688614.1 385779449 12421860 complement(2494295..2494612) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: mba:Mbar_A2782 cell surface protein; Dockerin type 1 2494612 12421860 Clo1313_2122 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688614.1 2494295 R 637887 CDS YP_005688615.1 385779450 12421863 2495781..2496422 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: cce:Ccel_2317 type IV pilus assembly PilZ; type IV pilus assembly PilZ 2496422 12421863 Clo1313_2123 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005688615.1 2495781 D 637887 CDS YP_005688616.1 385779451 12421864 complement(2496514..2496981) 1 NC_017304.1 KEGG: cce:Ccel_2003 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 2496981 12421864 Clo1313_2124 Clostridium thermocellum DSM 1313 6,7-dimethyl-8-ribityllumazine synthase YP_005688616.1 2496514 R 637887 CDS YP_005688617.1 385779452 12421865 complement(2496971..2498212) 1 NC_017304.1 KEGG: cce:Ccel_2004 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 2498212 12421865 Clo1313_2125 Clostridium thermocellum DSM 1313 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005688617.1 2496971 R 637887 CDS YP_005688618.1 385779453 12421866 complement(2498252..2498908) 1 NC_017304.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: cce:Ccel_2005 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 2498908 12421866 Clo1313_2126 Clostridium thermocellum DSM 1313 riboflavin synthase subunit alpha YP_005688618.1 2498252 R 637887 CDS YP_005688619.1 385779454 12421867 complement(2498987..2500093) 1 NC_017304.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: cce:Ccel_2006 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 2500093 12421867 Clo1313_2127 Clostridium thermocellum DSM 1313 riboflavin biosynthesis protein RibD YP_005688619.1 2498987 R 637887 CDS YP_005688620.1 385779455 12421868 complement(2500432..2500824) 1 NC_017304.1 PFAM: protein of unknown function UPF0047; KEGG: trq:TRQ2_0947 hypothetical protein; hypothetical protein 2500824 12421868 Clo1313_2128 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688620.1 2500432 R 637887 CDS YP_005688621.1 385779456 12421869 2501081..2501737 1 NC_017304.1 KEGG: cbt:CLH_0861 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 2501737 12421869 Clo1313_2129 Clostridium thermocellum DSM 1313 tRNA (guanine-N(7)-)-methyltransferase YP_005688621.1 2501081 D 637887 CDS YP_005688622.1 385779457 12421870 complement(2501825..2502994) 1 NC_017304.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: tmt:Tmath_0350 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2502994 12421870 Clo1313_2130 Clostridium thermocellum DSM 1313 iron-containing alcohol dehydrogenase YP_005688622.1 2501825 R 637887 CDS YP_005688623.1 385779458 12421871 complement(2503010..2503792) 1 NC_017304.1 KEGG: cce:Ccel_0027 hypothetical protein; hypothetical protein 2503792 12421871 Clo1313_2131 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688623.1 2503010 R 637887 CDS YP_005688624.1 385779459 12421872 2504203..2505078 1 NC_017304.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: drm:Dred_2192 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2505078 12421872 Clo1313_2132 Clostridium thermocellum DSM 1313 5,10-methylenetetrahydrofolate reductase YP_005688624.1 2504203 D 637887 CDS YP_005688625.1 385779460 12421873 complement(2505142..2506023) 1 NC_017304.1 KEGG: cce:Ccel_2547 peptidase M50; manually curated; PFAM: peptidase M50; CBS domain containing protein; peptidase M50 2506023 12421873 Clo1313_2133 Clostridium thermocellum DSM 1313 peptidase M50 YP_005688625.1 2505142 R 637887 CDS YP_005688626.1 385779461 12421874 complement(2506083..2507000) 1 NC_017304.1 PFAM: Peptidase M23; KEGG: cce:Ccel_2548 peptidase M23; peptidase M23 2507000 12421874 Clo1313_2134 Clostridium thermocellum DSM 1313 peptidase M23 YP_005688626.1 2506083 R 637887 CDS YP_005688627.1 385779462 12421875 2507189..2507452 1 NC_017304.1 PFAM: protein of unknown function UPF0180; KEGG: cce:Ccel_3466 protein of unknown function UPF0180; hypothetical protein 2507452 12421875 Clo1313_2135 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688627.1 2507189 D 637887 CDS YP_005688628.1 385779463 12421876 complement(2507510..2507905) 1 NC_017304.1 TIGRFAM: methylglyoxal synthase; KEGG: csc:Csac_1874 methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase 2507905 12421876 Clo1313_2136 Clostridium thermocellum DSM 1313 methylglyoxal synthase YP_005688628.1 2507510 R 637887 CDS YP_005688629.1 385779464 12421877 complement(2507926..2508210) 1 NC_017304.1 KEGG: cce:Ccel_2557 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor MinE 2508210 12421877 Clo1313_2137 Clostridium thermocellum DSM 1313 cell division topological specificity factor MinE YP_005688629.1 2507926 R 637887 CDS YP_005688630.1 385779465 12421878 complement(2508224..2509024) 1 NC_017304.1 TIGRFAM: septum site-determining protein MinD; KEGG: cce:Ccel_2558 septum site-determining protein MinD; septum site-determining protein MinD 2509024 12421878 Clo1313_2138 Clostridium thermocellum DSM 1313 septum site-determining protein MinD YP_005688630.1 2508224 R 637887 CDS YP_005688631.1 385779466 12421879 complement(2509239..2509922) 1 NC_017304.1 KEGG: cce:Ccel_2559 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; septum site-determining protein MinC 2509922 12421879 Clo1313_2139 Clostridium thermocellum DSM 1313 septum site-determining protein MinC YP_005688631.1 2509239 R 637887 CDS YP_005688632.1 385779467 12421880 complement(2509988..2512117) 1 NC_017304.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; manually curated; KEGG: cce:Ccel_2560 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 2512117 12421880 Clo1313_2140 Clostridium thermocellum DSM 1313 penicillin-binding protein 2 YP_005688632.1 2509988 R 637887 CDS YP_005688633.1 385779468 12421881 complement(2512231..2512761) 1 NC_017304.1 KEGG: cce:Ccel_2561 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD 2512761 12421881 Clo1313_2141 Clostridium thermocellum DSM 1313 rod shape-determining protein MreD YP_005688633.1 2512231 R 637887 CDS YP_005688634.1 385779469 12421882 complement(2512758..2513621) 1 NC_017304.1 KEGG: cce:Ccel_2562 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 2513621 12421882 Clo1313_2142 Clostridium thermocellum DSM 1313 rod shape-determining protein MreC YP_005688634.1 2512758 R 637887 CDS YP_005688635.1 385779470 12421883 complement(2513638..2514660) 1 NC_017304.1 KEGG: cce:Ccel_2563 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 2514660 12421883 Clo1313_2143 Clostridium thermocellum DSM 1313 MreB/Mrl family cell shape determining protein YP_005688635.1 2513638 R 637887 CDS YP_005688636.1 385779471 12421884 complement(2514738..2515340) 1 NC_017304.1 KEGG: tpd:Teth39_1454 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 2515340 12421884 Clo1313_2144 Clostridium thermocellum DSM 1313 maf protein YP_005688636.1 2514738 R 637887 CDS YP_005688637.1 385779472 12421885 complement(2515608..2516492) 1 NC_017304.1 KEGG: cin:100186226 similar to pleckstrin homology-like domain, family B, member 1; hypothetical protein 2516492 12421885 Clo1313_2145 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688637.1 2515608 R 637887 CDS YP_005688638.1 385779473 12421886 2516873..2517505 1 NC_017304.1 PFAM: Negative regulator of genetic competence; KEGG: cce:Ccel_2566 negative regulator of genetic competence; negative regulator of genetic competence 2517505 12421886 Clo1313_2146 Clostridium thermocellum DSM 1313 negative regulator of genetic competence YP_005688638.1 2516873 D 637887 CDS YP_005688639.1 385779474 12421887 2517843..2518388 1 NC_017304.1 KEGG: amt:Amet_3673 hypothetical protein; hypothetical protein 2518388 12421887 Clo1313_2147 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688639.1 2517843 D 637887 CDS YP_005688640.1 385779475 12421888 complement(2518404..2520083) 1 NC_017304.1 KEGG: amt:Amet_1030 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase 2520083 12421888 Clo1313_2148 Clostridium thermocellum DSM 1313 protein serine/threonine phosphatase YP_005688640.1 2518404 R 637887 CDS YP_005688641.1 385779476 12421889 complement(2520396..2522843) 1 NC_017304.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: cce:Ccel_2568 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATP-dependent protease La 2522843 12421889 Clo1313_2149 Clostridium thermocellum DSM 1313 ATP-dependent protease La YP_005688641.1 2520396 R 637887 CDS YP_005688642.1 385779477 12421890 2523486..2524691 1 NC_017304.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: cce:Ccel_2098 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 2524691 12421890 Clo1313_2150 Clostridium thermocellum DSM 1313 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein YP_005688642.1 2523486 D 637887 CDS YP_005688643.1 385779478 12421891 2524966..2525397 1 NC_017304.1 KEGG: ate:Athe_2102 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 2525397 12421891 Clo1313_2151 Clostridium thermocellum DSM 1313 CheW protein YP_005688643.1 2524966 D 637887 CDS YP_005688644.1 385779479 12421892 complement(2525449..2525964) 1 NC_017304.1 KEGG: pjd:Pjdr2_0812 hypothetical protein; hypothetical protein 2525964 12421892 Clo1313_2152 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688644.1 2525449 R 637887 CDS YP_005688645.1 385779480 12421893 2526249..2526455 1 NC_017304.1 KEGG: cce:Ccel_2664 hypothetical protein; hypothetical protein 2526455 12421893 Clo1313_2153 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688645.1 2526249 D 637887 CDS YP_005688646.1 385779481 12421894 complement(2526526..2526909) 1 NC_017304.1 KEGG: cce:Ccel_1337 hypothetical protein; hypothetical protein 2526909 12421894 Clo1313_2154 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688646.1 2526526 R 637887 CDS YP_005688647.1 385779482 12421895 complement(2527072..2527461) 1 NC_017304.1 KEGG: cce:Ccel_1336 hypothetical protein; hypothetical protein 2527461 12421895 Clo1313_2155 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688647.1 2527072 R 637887 CDS YP_005688648.1 385779483 12421896 complement(2527760..2528347) 1 NC_017304.1 KEGG: pfa:PF11_0207 conserved Plasmodium protein; hypothetical protein 2528347 12421896 Clo1313_2156 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688648.1 2527760 R 637887 CDS YP_005688649.1 385779484 12421897 complement(2528391..2528552) 1 NC_017304.1 KEGG: tte:TTE0873 hypothetical protein; hypothetical protein 2528552 12421897 Clo1313_2157 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688649.1 2528391 R 637887 CDS YP_005688650.1 385779485 12421899 complement(2528757..2529722) 1 NC_017304.1 KEGG: aoe:Clos_1043 hypothetical protein; hypothetical protein 2529722 12421899 Clo1313_2159 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688650.1 2528757 R 637887 CDS YP_005688651.1 385779486 12421900 complement(2529719..2530204) 1 NC_017304.1 PFAM: PspC domain protein; KEGG: amt:Amet_3314 phage shock protein C, PspC; phage shock protein C, PspC 2530204 12421900 Clo1313_2160 Clostridium thermocellum DSM 1313 phage shock protein C, PspC YP_005688651.1 2529719 R 637887 CDS YP_005688652.1 385779487 12421901 2530447..2533263 1 NC_017304.1 KEGG: cpy:Cphy_3368 cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 48; type 3a cellulose-binding domain protein; cellulose 1,4-beta-cellobiosidase 2533263 12421901 Clo1313_2161 Clostridium thermocellum DSM 1313 cellulose 1,4-beta-cellobiosidase YP_005688652.1 2530447 D 637887 CDS YP_005688653.1 385779488 12421902 complement(2533465..2534859) 1 NC_017304.1 KEGG: cce:Ccel_2574 asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; asparaginyl-tRNA synthetase 2534859 12421902 Clo1313_2162 Clostridium thermocellum DSM 1313 asparaginyl-tRNA synthetase YP_005688653.1 2533465 R 637887 CDS YP_005688654.1 385779489 12421903 complement(2534996..2536018) 1 NC_017304.1 TIGRFAM: aspartate/ammonia ligase; KEGG: cce:Ccel_2575 asparagine synthetase AsnA; PFAM: aspartate--ammonia ligase; aspartate/ammonia ligase 2536018 12421903 Clo1313_2163 Clostridium thermocellum DSM 1313 aspartate/ammonia ligase YP_005688654.1 2534996 R 637887 CDS YP_005688655.1 385779490 12421904 2536209..2536820 1 NC_017304.1 KEGG: cce:Ccel_3079 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Peptidylprolyl isomerase 2536820 12421904 Clo1313_2164 Clostridium thermocellum DSM 1313 Peptidylprolyl isomerase YP_005688655.1 2536209 D 637887 CDS YP_005688656.1 385779491 12421905 complement(2536892..2537617) 1 NC_017304.1 PFAM: Silent information regulator protein Sir2; KEGG: clj:CLJU_c01320 NAD-dependent deacetylase; silent information regulator protein Sir2 2537617 12421905 Clo1313_2165 Clostridium thermocellum DSM 1313 silent information regulator protein Sir2 YP_005688656.1 2536892 R 637887 CDS YP_005688657.1 385779492 12421906 complement(2537675..2538151) 1 NC_017304.1 KEGG: cbb:CLD_3291 hypothetical protein; hypothetical protein 2538151 12421906 Clo1313_2166 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688657.1 2537675 R 637887 CDS YP_005688658.1 385779493 12421907 complement(2538148..2538486) 1 NC_017304.1 KEGG: cno:NT01CX_0223 hypothetical protein; hypothetical protein 2538486 12421907 Clo1313_2167 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688658.1 2538148 R 637887 CDS YP_005688659.1 385779494 12421908 2538682..2539638 1 NC_017304.1 KEGG: afn:Acfer_0490 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; Na/Pi-cotransporter II-like protein 2539638 12421908 Clo1313_2168 Clostridium thermocellum DSM 1313 Na/Pi-cotransporter II-like protein YP_005688659.1 2538682 D 637887 CDS YP_005688660.1 385779495 12421909 complement(2539659..2539994) 1 NC_017304.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cbe:Cbei_2158 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 2539994 12421909 Clo1313_2169 Clostridium thermocellum DSM 1313 rubredoxin-type Fe(Cys)4 protein YP_005688660.1 2539659 R 637887 CDS YP_005688661.1 385779496 12421910 2540261..2542150 1 NC_017304.1 PFAM: sulfatase; KEGG: cbi:CLJ_B3115 sulfatase family protein; sulfatase 2542150 12421910 Clo1313_2170 Clostridium thermocellum DSM 1313 sulfatase YP_005688661.1 2540261 D 637887 CDS YP_005688662.1 385779497 12421911 2542360..2542908 1 NC_017304.1 PFAM: BioY protein; KEGG: cby:CLM_1052 BioY family protein; BioY protein 2542908 12421911 Clo1313_2171 Clostridium thermocellum DSM 1313 BioY protein YP_005688662.1 2542360 D 637887 CDS YP_005688663.1 385779498 12421912 complement(2543053..2543556) 1 NC_017304.1 PFAM: SEC-C motif domain protein; KEGG: cce:Ccel_2572 hypothetical protein; SEC-C motif domain-containing protein 2543556 12421912 Clo1313_2172 Clostridium thermocellum DSM 1313 SEC-C motif domain-containing protein YP_005688663.1 2543053 R 637887 CDS YP_005688664.1 385779499 12421913 complement(2543675..2545135) 1 NC_017304.1 PFAM: type 3a cellulose-binding domain protein; KEGG: cce:Ccel_1740 hypothetical protein; type 3a cellulose-binding domain-containing protein 2545135 12421913 Clo1313_2173 Clostridium thermocellum DSM 1313 type 3a cellulose-binding domain-containing protein YP_005688664.1 2543675 R 637887 CDS YP_005688665.1 385779500 12421914 complement(2545142..2545903) 1 NC_017304.1 TIGRFAM: RNA polymerase sigma-I factor; KEGG: cbe:Cbei_2829 putative RNA polymerase sigma factor SigI; RNA polymerase sigma-I factor 2545903 12421914 Clo1313_2174 Clostridium thermocellum DSM 1313 RNA polymerase sigma-I factor YP_005688665.1 2545142 R 637887 CDS YP_005688666.1 385779501 12421915 2546121..2546753 1 NC_017304.1 KEGG: aoe:Clos_2167 hypothetical protein; hypothetical protein 2546753 12421915 Clo1313_2175 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688666.1 2546121 D 637887 CDS YP_005688667.1 385779502 12421916 complement(2546829..2560709) 1 NC_017304.1 KEGG: cpy:Cphy_2500 Ig domain-containing protein; PFAM: S-layer domain-containing protein; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; S-layer protein 2560709 12421916 Clo1313_2176 Clostridium thermocellum DSM 1313 S-layer protein YP_005688667.1 2546829 R 637887 CDS YP_005688668.1 385779503 12421917 complement(2561200..2561736) 1 NC_017304.1 KEGG: cce:Ccel_1170 hypothetical protein; hypothetical protein 2561736 12421917 Clo1313_2177 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688668.1 2561200 R 637887 CDS YP_005688669.1 385779504 12421918 complement(2561978..2564167) 1 NC_017304.1 PFAM: protein of unknown function DUF187; S-layer domain-containing protein; KEGG: amt:Amet_3669 hypothetical protein; hypothetical protein 2564167 12421918 Clo1313_2178 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688669.1 2561978 R 637887 CDS YP_005688670.1 385779505 12421919 complement(2564422..2566806) 1 NC_017304.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: cce:Ccel_2401 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase 2566806 12421919 Clo1313_2179 Clostridium thermocellum DSM 1313 ribonucleoside-diphosphate reductase YP_005688670.1 2564422 R 637887 CDS YP_005688671.1 385779506 12421920 complement(2567084..2568343) 1 NC_017304.1 KEGG: cce:Ccel_2402 hypothetical protein; hypothetical protein 2568343 12421920 Clo1313_2180 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688671.1 2567084 R 637887 CDS YP_005688672.1 385779507 12421921 complement(2568544..2569803) 1 NC_017304.1 KEGG: cce:Ccel_2402 hypothetical protein; hypothetical protein 2569803 12421921 Clo1313_2181 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688672.1 2568544 R 637887 CDS YP_005688673.1 385779508 12421922 complement(2569984..2570943) 1 NC_017304.1 KEGG: cac:CA_C0870 hypothetical protein; hypothetical protein 2570943 12421922 Clo1313_2182 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688673.1 2569984 R 637887 CDS YP_005688674.1 385779509 12421923 complement(2571244..2571906) 1 NC_017304.1 KEGG: cce:Ccel_1150 XRE family plasmid maintenance system antidote protein; PFAM: helix-turn-helix domain protein; Peptidase S24/S26A/S26B, conserved region; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2571906 12421923 Clo1313_2183 Clostridium thermocellum DSM 1313 helix-turn-helix domain-containing protein YP_005688674.1 2571244 R 637887 CDS YP_005688675.1 385779510 12421924 complement(2571992..2572801) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0805 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2572801 12421924 Clo1313_2184 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688675.1 2571992 R 637887 CDS YP_005688676.1 385779511 12421925 complement(2572821..2573630) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0805 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2573630 12421925 Clo1313_2185 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688676.1 2572821 R 637887 CDS YP_005688677.1 385779512 12421926 complement(2573878..2576580) 1 NC_017304.1 KEGG: pth:PTH_0170 hypothetical protein; hypothetical protein 2576580 12421926 Clo1313_2186 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688677.1 2573878 R 637887 CDS YP_005688678.1 385779513 12421927 complement(2576626..2577435) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2577435 12421927 Clo1313_2187 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688678.1 2576626 R 637887 CDS YP_005688679.1 385779514 12421928 2577787..2579388 1 NC_017304.1 PFAM: Spore coat protein CotH; Dockerin type 1; KEGG: gau:GAU_1784 hypothetical protein; spore coat protein CotH 2579388 12421928 Clo1313_2188 Clostridium thermocellum DSM 1313 spore coat protein CotH YP_005688679.1 2577787 D 637887 CDS YP_005688680.1 385779515 12421929 complement(2579512..2581740) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: cce:Ccel_0231 glycoside hydrolase family 9; glycoside hydrolase 2581740 12421929 Clo1313_2189 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688680.1 2579512 R 637887 CDS YP_005688681.1 385779516 12421930 complement(2582127..2583329) 1 NC_017304.1 KEGG: cpy:Cphy_2081 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; small GTP-binding protein 2583329 12421930 Clo1313_2190 Clostridium thermocellum DSM 1313 small GTP-binding protein YP_005688681.1 2582127 R 637887 CDS YP_005688682.1 385779517 12421931 2583554..2583988 1 NC_017304.1 KEGG: gtn:GTNG_1264 hypothetical protein; hypothetical protein 2583988 12421931 Clo1313_2191 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688682.1 2583554 D 637887 CDS YP_005688683.1 385779518 12421932 complement(2583990..2586653) 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; KEGG: csc:Csac_1076 glycoside hydrolase family protein; glycoside hydrolase 2586653 12421932 Clo1313_2192 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688683.1 2583990 R 637887 CDS YP_005688684.1 385779519 12421933 complement(2586897..2588768) 1 NC_017304.1 KEGG: cce:Ccel_2313 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2588768 12421933 Clo1313_2193 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688684.1 2586897 R 637887 CDS YP_005688685.1 385779520 12421934 complement(2588821..2589285) 1 NC_017304.1 KEGG: cce:Ccel_2314 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 2589285 12421934 Clo1313_2194 Clostridium thermocellum DSM 1313 CheW protein YP_005688685.1 2588821 R 637887 CDS YP_005688686.1 385779521 12421935 complement(2590057..2591928) 1 NC_017304.1 KEGG: cce:Ccel_2313 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2591928 12421935 Clo1313_2195 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688686.1 2590057 R 637887 CDS YP_005688687.1 385779522 12421936 complement(2591981..2592445) 1 NC_017304.1 KEGG: cce:Ccel_2314 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 2592445 12421936 Clo1313_2196 Clostridium thermocellum DSM 1313 CheW protein YP_005688687.1 2591981 R 637887 CDS YP_005688688.1 385779523 12421937 2593299..2593727 1 NC_017304.1 PFAM: heat shock protein Hsp20; KEGG: hth:HTH_0332 small heat shock protein HSP20; heat shock protein Hsp20 2593727 12421937 Clo1313_2197 Clostridium thermocellum DSM 1313 heat shock protein Hsp20 YP_005688688.1 2593299 D 637887 CDS YP_005688689.1 385779524 12421938 complement(2593829..2595457) 1 NC_017304.1 KEGG: cce:Ccel_0749 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein 2595457 12421938 Clo1313_2198 Clostridium thermocellum DSM 1313 hybrid cluster protein YP_005688689.1 2593829 R 637887 CDS YP_005688690.1 385779525 12421939 complement(2595517..2596221) 1 NC_017304.1 KEGG: cdf:CD2169 iron-sulfur binding protein; iron-sulfur binding protein 2596221 12421939 Clo1313_2199 Clostridium thermocellum DSM 1313 iron-sulfur binding protein YP_005688690.1 2595517 R 637887 CDS YP_005688691.1 385779526 12421940 2596336..2596995 1 NC_017304.1 KEGG: cpy:Cphy_3149 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; CarD family transcriptional regulator 2596995 12421940 Clo1313_2200 Clostridium thermocellum DSM 1313 CarD family transcriptional regulator YP_005688691.1 2596336 D 637887 CDS YP_005688692.1 385779527 12421941 complement(2597112..2599778) 1 NC_017304.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function DUF901; elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain-containing protein; KEGG: cce:Ccel_1053 small GTP-binding protein; SMART: elongation factor G domain IV; elongation factor G domain-containing protein; small GTP-binding protein 2599778 12421941 Clo1313_2201 Clostridium thermocellum DSM 1313 small GTP-binding protein YP_005688692.1 2597112 R 637887 CDS YP_005688693.1 385779528 12421942 2600147..2601919 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: cce:Ccel_1551 glycoside hydrolase family 26; Dockerin type 1 2601919 12421942 Clo1313_2202 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005688693.1 2600147 D 637887 CDS YP_005688694.1 385779529 12421943 complement(2601986..2602630) 1 NC_017304.1 PFAM: Protein of unknown function DUF2174-like; KEGG: fsu:Fisuc_0606 hypothetical protein; hypothetical protein 2602630 12421943 Clo1313_2203 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688694.1 2601986 R 637887 CDS YP_005688695.1 385779530 12421944 2603067..2604077 1 NC_017304.1 PFAM: Nucleotidyltransferase, predicted; KEGG: cby:CLM_2617 hypothetical protein; nucleotidyltransferase 2604077 12421944 Clo1313_2204 Clostridium thermocellum DSM 1313 nucleotidyltransferase YP_005688695.1 2603067 D 637887 CDS YP_005688696.1 385779531 12421947 complement(2606220..2607593) 1 NC_017304.1 KEGG: ate:Athe_2542 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2607593 12421947 Clo1313_2207 Clostridium thermocellum DSM 1313 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005688696.1 2606220 R 637887 CDS YP_005688697.1 385779532 12421948 complement(2607586..2608437) 1 NC_017304.1 KEGG: bmq:BMQ_3717 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC 2608437 12421948 Clo1313_2208 Clostridium thermocellum DSM 1313 biotin biosynthesis protein BioC YP_005688697.1 2607586 R 637887 CDS YP_005688698.1 385779533 12421949 complement(2608427..2609179) 1 NC_017304.1 manually curated; KEGG: bmq:BMQ_3716 biotin biosynthesis protein BioH; PFAM: alpha/beta hydrolase fold; Carboxylesterase 2609179 12421949 Clo1313_2209 Clostridium thermocellum DSM 1313 Carboxylesterase YP_005688698.1 2608427 R 637887 CDS YP_005688699.1 385779534 12421950 complement(2609203..2610369) 1 NC_017304.1 PFAM: aminotransferase class I and II; manually curated; KEGG: tex:Teth514_0779 pyridoxal phosphate-dependent acyltransferase, putative; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 2610369 12421950 Clo1313_2210 Clostridium thermocellum DSM 1313 8-amino-7-oxononanoate synthase YP_005688699.1 2609203 R 637887 CDS YP_005688700.1 385779535 12421951 complement(2610362..2611096) 1 NC_017304.1 KEGG: csc:Csac_0305 dethiobiotin synthase; manually curated; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 2611096 12421951 Clo1313_2211 Clostridium thermocellum DSM 1313 dethiobiotin synthase YP_005688700.1 2610362 R 637887 CDS YP_005688701.1 385779536 12421952 complement(2611093..2612055) 1 NC_017304.1 KEGG: tjr:TherJR_0016 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; manually curated; TIGRFAM: biotin synthase; SMART: Elongator protein 3/MiaB/NifB; biotin and thiamin synthesis associated; biotin synthase 2612055 12421952 Clo1313_2212 Clostridium thermocellum DSM 1313 biotin synthase YP_005688701.1 2611093 R 637887 CDS YP_005688702.1 385779537 12421954 complement(2612934..2614796) 1 NC_017304.1 PFAM: protein of unknown function DUF1538; KEGG: dhd:Dhaf_1786 protein of unknown function DUF1538; hypothetical protein 2614796 12421954 Clo1313_2214 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688702.1 2612934 R 637887 CDS YP_005688703.1 385779538 12421955 complement(2615353..2615832) 1 NC_017304.1 PFAM: Ferritin Dps family protein; KEGG: apr:Apre_1391 ferritin Dps family protein; ferritin Dps family protein 2615832 12421955 Clo1313_2215 Clostridium thermocellum DSM 1313 ferritin Dps family protein YP_005688703.1 2615353 R 637887 CDS YP_005688704.1 385779539 12421956 complement(2616196..2618319) 1 NC_017304.1 PFAM: alpha-L-arabinofuranosidase B; Dockerin type 1; glycoside hydrolase family 43; KEGG: bsu:BSU39330 arabinan endo-1,5-alpha-L-arabinosidase; alpha-L-arabinofuranosidase 2618319 12421956 Clo1313_2216 Clostridium thermocellum DSM 1313 alpha-L-arabinofuranosidase YP_005688704.1 2616196 R 637887 CDS YP_005688705.1 385779540 12421957 complement(2618936..2619265) 1 NC_017304.1 KEGG: ptm:GSPATT00035077001 hypothetical protein; hypothetical protein 2619265 12421957 Clo1313_2217 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688705.1 2618936 R 637887 CDS YP_005688706.1 385779541 12421959 complement(2620366..2620743) 1 NC_017304.1 manually curated; KEGG: afl:Aflv_0562 hypothetical protein; hypothetical protein 2620743 12421959 Clo1313_2219 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688706.1 2620366 R 637887 CDS YP_005688707.1 385779542 12421961 complement(2626362..2626664) 1 NC_017304.1 KEGG: cce:Ccel_1068 protein tyrosine phosphatase; hypothetical protein 2626664 12421961 Clo1313_2221 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688707.1 2626362 R 637887 CDS YP_005688708.1 385779543 12421962 complement(2626857..2627390) 1 NC_017304.1 KEGG: bwe:BcerKBAB4_4445 hypothetical protein; hypothetical protein 2627390 12421962 Clo1313_2222 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688708.1 2626857 R 637887 CDS YP_005688709.1 385779544 12421963 complement(2628266..2628898) 1 NC_017304.1 manually curated; KEGG: npu:Npun_F1419 WD-40 repeat-containing protein; hypothetical protein 2628898 12421963 Clo1313_2223 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688709.1 2628266 R 637887 CDS YP_005688710.1 385779545 12421964 2628987..2630210 1 NC_017304.1 KEGG: tpd:Teth39_2032 transposase, mutator type; manually curated; PFAM: transposase mutator type; transposase mutator type 2630210 12421964 Clo1313_2224 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688710.1 2628987 D 637887 CDS YP_005688711.1 385779546 12421965 complement(2630724..2631038) 1 NC_017304.1 KEGG: pth:PTH_2444 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2631038 12421965 Clo1313_2225 Clostridium thermocellum DSM 1313 helix-turn-helix domain-containing protein YP_005688711.1 2630724 R 637887 CDS YP_005688712.1 385779547 12421966 complement(2631064..2631411) 1 NC_017304.1 KEGG: pth:PTH_2443 hypothetical protein; manually curated; PFAM: protein of unknown function DUF891; hypothetical protein 2631411 12421966 Clo1313_2226 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688712.1 2631064 R 637887 CDS YP_005688713.1 385779548 12421968 complement(2632012..2632464) 1 NC_017304.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ere:EUBREC_1225 peroxiredoxin; alkyl hydroperoxide reductase 2632464 12421968 Clo1313_2228 Clostridium thermocellum DSM 1313 alkyl hydroperoxide reductase YP_005688713.1 2632012 R 637887 CDS YP_005688714.1 385779549 12421969 complement(2632725..2633270) 1 NC_017304.1 PFAM: protein of unknown function DUF1706; KEGG: seq:SZO_12730 hypothetical protein; hypothetical protein 2633270 12421969 Clo1313_2229 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688714.1 2632725 R 637887 CDS YP_005688715.1 385779550 12421971 2633716..2633904 1 NC_017304.1 KEGG: fno:Fnod_0812 hypothetical protein; hypothetical protein 2633904 12421971 Clo1313_2231 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688715.1 2633716 D 637887 CDS YP_005688716.1 385779551 12421972 2634571..2635134 1 NC_017304.1 KEGG: pjd:Pjdr2_5633 RNA polymerase sigma factor SigW; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2635134 12421972 Clo1313_2232 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005688716.1 2634571 D 637887 CDS YP_005688717.1 385779552 12421973 2635131..2636816 1 NC_017304.1 PFAM: glycoside hydrolase family 5; KEGG: tbi:Tbis_2319 family 5 glycoside hydrolase; glycoside hydrolase 2636816 12421973 Clo1313_2233 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688717.1 2635131 D 637887 CDS YP_005688718.1 385779553 12421974 2637086..2639788 1 NC_017304.1 KEGG: cce:Ccel_0840 glycoside hydrolase family 5; manually curated; PFAM: glycoside hydrolase family 5; Dockerin type 1; glycoside hydrolase 2639788 12421974 Clo1313_2234 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688718.1 2637086 D 637887 CDS YP_005688719.1 385779554 12421975 complement(2640004..2640567) 1 NC_017304.1 PFAM: NADPH-dependent FMN reductase; KEGG: ele:Elen_1278 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2640567 12421975 Clo1313_2235 Clostridium thermocellum DSM 1313 NADPH-dependent FMN reductase YP_005688719.1 2640004 R 637887 CDS YP_005688720.1 385779555 12421977 complement(2641392..2641739) 1 NC_017304.1 manually curated; KEGG: hmo:HM1_2511 sigma-54 dependent transcriptional regulator; hypothetical protein 2641739 12421977 Clo1313_2237 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688720.1 2641392 R 637887 CDS YP_005688721.1 385779556 12421978 complement(2641878..2642795) 1 NC_017304.1 KEGG: tle:Tlet_0370 carbamoyl-phosphate synthase, large subunit; hypothetical protein 2642795 12421978 Clo1313_2238 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688721.1 2641878 R 637887 CDS YP_005688722.1 385779557 12421979 complement(2643189..2643725) 1 NC_017304.1 KEGG: ele:Elen_1249 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; deoxycytidine triphosphate deaminase 2643725 12421979 Clo1313_2239 Clostridium thermocellum DSM 1313 deoxycytidine triphosphate deaminase YP_005688722.1 2643189 R 637887 CDS YP_005688723.1 385779558 12421980 2644178..2644738 1 NC_017304.1 PFAM: regulatory protein TetR; KEGG: cpy:Cphy_0176 TetR family transcriptional regulator; regulatory protein TetR 2644738 12421980 Clo1313_2240 Clostridium thermocellum DSM 1313 regulatory protein TetR YP_005688723.1 2644178 D 637887 CDS YP_005688724.1 385779559 12421981 2644920..2645528 1 NC_017304.1 KEGG: ere:EUBREC_0239 hypothetical protein; hypothetical protein 2645528 12421981 Clo1313_2241 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688724.1 2644920 D 637887 CDS YP_005688725.1 385779560 12421982 2645525..2647630 1 NC_017304.1 KEGG: eel:EUBELI_00031 hypothetical protein; hypothetical protein 2647630 12421982 Clo1313_2242 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688725.1 2645525 D 637887 CDS YP_005688726.1 385779561 12421983 2647620..2649932 1 NC_017304.1 manually curated; KEGG: ere:EUBREC_3014 transmembrane protein; hypothetical protein 2649932 12421983 Clo1313_2243 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688726.1 2647620 D 637887 CDS YP_005688727.1 385779562 12421984 complement(2650035..2650850) 1 NC_017304.1 KEGG: clj:CLJU_c24920 putative hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 2650850 12421984 Clo1313_2244 Clostridium thermocellum DSM 1313 cof family hydrolase YP_005688727.1 2650035 R 637887 CDS YP_005688728.1 385779563 12421985 complement(2650853..2651911) 1 NC_017304.1 KEGG: aoe:Clos_0811 hypothetical protein; hypothetical protein 2651911 12421985 Clo1313_2245 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688728.1 2650853 R 637887 CDS YP_005688729.1 385779564 12421986 complement(2652145..2652855) 1 NC_017304.1 KEGG: lac:LBA0355 transcriptional regulator; transcriptional regulator 2652855 12421986 Clo1313_2246 Clostridium thermocellum DSM 1313 transcriptional regulator YP_005688729.1 2652145 R 637887 CDS YP_005688730.1 385779565 12421987 complement(2652979..2654202) 1 NC_017304.1 SMART: beta-lactamase domain protein; KEGG: aoe:Clos_0139 beta-lactamase domain-containing protein; beta-lactamase 2654202 12421987 Clo1313_2247 Clostridium thermocellum DSM 1313 beta-lactamase YP_005688730.1 2652979 R 637887 CDS YP_005688731.1 385779566 12421988 complement(2654345..2654740) 1 NC_017304.1 PFAM: NUDIX hydrolase; KEGG: dhd:Dhaf_2293 mutator MutT protein; NUDIX hydrolase 2654740 12421988 Clo1313_2248 Clostridium thermocellum DSM 1313 NUDIX hydrolase YP_005688731.1 2654345 R 637887 CDS YP_005688732.1 385779567 12421989 complement(2654758..2655147) 1 NC_017304.1 manually curated; KEGG: cby:CLM_1089 hypothetical protein; hypothetical protein 2655147 12421989 Clo1313_2249 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688732.1 2654758 R 637887 CDS YP_005688733.1 385779568 12421990 complement(2655542..2657818) 1 NC_017304.1 KEGG: cce:Ccel_3226 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2657818 12421990 Clo1313_2250 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688733.1 2655542 R 637887 CDS YP_005688734.1 385779569 12421991 complement(2657867..2658253) 1 NC_017304.1 KEGG: pfa:MAL7P1.146 hypothetical protein; hypothetical protein 2658253 12421991 Clo1313_2251 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688734.1 2657867 R 637887 CDS YP_005688735.1 385779570 12421992 complement(2658255..2658875) 1 NC_017304.1 KEGG: cbh:CLC_1041 hypothetical protein; hypothetical protein 2658875 12421992 Clo1313_2252 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688735.1 2658255 R 637887 CDS YP_005688736.1 385779571 12421993 complement(2658877..2659194) 1 NC_017304.1 PFAM: transcriptional regulator PadR family protein; KEGG: sak:SAK_1972 PadR family transcriptional regulator; PadR family transcriptional regulator 2659194 12421993 Clo1313_2253 Clostridium thermocellum DSM 1313 PadR family transcriptional regulator YP_005688736.1 2658877 R 637887 CDS YP_005688737.1 385779572 12421994 complement(2659412..2661034) 1 NC_017304.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: apv:Apar_1266 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 2661034 12421994 Clo1313_2254 Clostridium thermocellum DSM 1313 NAD(P)H dehydrogenase (quinone) YP_005688737.1 2659412 R 637887 CDS YP_005688738.1 385779573 12421995 complement(2661031..2661573) 1 NC_017304.1 KEGG: apv:Apar_1267 transcriptional regulator, PadR-like family; manually curated; PFAM: transcriptional regulator PadR family protein; PadR-like family transcriptional regulator 2661573 12421995 Clo1313_2255 Clostridium thermocellum DSM 1313 PadR-like family transcriptional regulator YP_005688738.1 2661031 R 637887 CDS YP_005688739.1 385779574 12421996 complement(2661671..2662084) 1 NC_017304.1 KEGG: tde:TDE2739 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane; hypothetical protein 2662084 12421996 Clo1313_2256 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688739.1 2661671 R 637887 CDS YP_005688740.1 385779575 12421997 complement(2662236..2662628) 1 NC_017304.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: slp:Slip_0090 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2662628 12421997 Clo1313_2257 Clostridium thermocellum DSM 1313 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_005688740.1 2662236 R 637887 CDS YP_005688741.1 385779576 12421998 complement(2662822..2663460) 1 NC_017304.1 KEGG: clj:CLJU_c26800 hypothetical protein; hypothetical protein 2663460 12421998 Clo1313_2258 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688741.1 2662822 R 637887 CDS YP_005688742.1 385779577 12421999 complement(2663739..2665553) 1 NC_017304.1 KEGG: cce:Ccel_2313 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2665553 12421999 Clo1313_2259 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005688742.1 2663739 R 637887 CDS YP_005688743.1 385779578 12422000 2666554..2668308 1 NC_017304.1 KEGG: afw:Anae109_3636 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; nitrogen regulatory protein P-II; ammonium transporter 2668308 12422000 Clo1313_2260 Clostridium thermocellum DSM 1313 ammonium transporter YP_005688743.1 2666554 D 637887 CDS YP_005688744.1 385779579 12422001 complement(2668431..2670404) 1 NC_017304.1 KEGG: bfs:BF2979 putative ABC transport system, membrane protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter 2670404 12422001 Clo1313_2261 Clostridium thermocellum DSM 1313 ABC transporter YP_005688744.1 2668431 R 637887 CDS YP_005688745.1 385779580 12422002 complement(2670404..2672140) 1 NC_017304.1 manually curated; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: ate:Athe_2619 ABC transporter related; SMART: AAA ATPase; ABC transporter 2672140 12422002 Clo1313_2262 Clostridium thermocellum DSM 1313 ABC transporter YP_005688745.1 2670404 R 637887 CDS YP_005688746.1 385779581 12422003 complement(2672161..2672634) 1 NC_017304.1 KEGG: tle:Tlet_1610 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 2672634 12422003 Clo1313_2263 Clostridium thermocellum DSM 1313 MarR family transcriptional regulator YP_005688746.1 2672161 R 637887 CDS YP_005688747.1 385779582 12422004 2672908..2673267 1 NC_017304.1 KEGG: ate:Athe_0416 hypothetical protein; hypothetical protein 2673267 12422004 Clo1313_2264 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688747.1 2672908 D 637887 CDS YP_005688748.1 385779583 12422005 2673279..2674091 1 NC_017304.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: ele:Elen_3018 Linocin_M18 bacteriocin protein; Linocin_M18 bacteriocin protein 2674091 12422005 Clo1313_2265 Clostridium thermocellum DSM 1313 Linocin_M18 bacteriocin protein YP_005688748.1 2673279 D 637887 CDS YP_005688749.1 385779584 12422006 complement(2674242..2674982) 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: drm:Dred_2998 S-layer domain-containing protein; S-layer protein 2674982 12422006 Clo1313_2266 Clostridium thermocellum DSM 1313 S-layer protein YP_005688749.1 2674242 R 637887 CDS YP_005688750.1 385779585 12422007 complement(2675487..2676629) 1 NC_017304.1 KEGG: ere:EUBREC_2808 metal dependent phosphohydrolase; manually curated; PFAM: protein of unknown function DUF1113; metal-dependent phosphohydrolase HD sub domain; metal dependent phosphohydrolase 2676629 12422007 Clo1313_2267 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005688750.1 2675487 R 637887 CDS YP_005688751.1 385779586 12422009 complement(2677161..2677619) 1 NC_017304.1 PFAM: AIG2 family protein; KEGG: cpf:CPF_1677 hypothetical protein; AIG2 family protein 2677619 12422009 Clo1313_2269 Clostridium thermocellum DSM 1313 AIG2 family protein YP_005688751.1 2677161 R 637887 CDS YP_005688752.1 385779587 12422010 complement(2677849..2678205) 1 NC_017304.1 PFAM: arsenate reductase and related; KEGG: dhd:Dhaf_2269 arsenate reductase and related; arsenate reductase-like protein 2678205 12422010 Clo1313_2270 Clostridium thermocellum DSM 1313 arsenate reductase-like protein YP_005688752.1 2677849 R 637887 CDS YP_005688753.1 385779588 12422011 complement(2679062..2680297) 1 NC_017304.1 PFAM: protein of unknown function DUF438; Hemerythrin HHE cation binding domain protein; KEGG: dhd:Dhaf_2669 protein of unknown function DUF438; hypothetical protein 2680297 12422011 Clo1313_2271 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688753.1 2679062 R 637887 CDS YP_005688754.1 385779589 12422012 complement(2680570..2681313) 1 NC_017304.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cbe:Cbei_1961 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2681313 12422012 Clo1313_2272 Clostridium thermocellum DSM 1313 short-chain dehydrogenase/reductase SDR YP_005688754.1 2680570 R 637887 CDS YP_005688755.1 385779590 12422013 complement(2681391..2682380) 1 NC_017304.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: chy:CHY_2212 putative DNA methylase; DNA methylase N-4/N-6 domain-containing protein 2682380 12422013 Clo1313_2273 Clostridium thermocellum DSM 1313 DNA methylase N-4/N-6 domain-containing protein YP_005688755.1 2681391 R 637887 CDS YP_005688756.1 385779591 12422014 complement(2682385..2683317) 1 NC_017304.1 manually curated; KEGG: cpo:COPRO5265_1446 type II restriction enzyme R protein; PFAM: DpmII restriction endonuclease; type II site-specific deoxyribonuclease 2683317 12422014 Clo1313_2274 Clostridium thermocellum DSM 1313 type II site-specific deoxyribonuclease YP_005688756.1 2682385 R 637887 CDS YP_005688757.1 385779592 12422015 complement(2683327..2684268) 1 NC_017304.1 manually curated; TIGRFAM: DNA adenine methylase; KEGG: chy:CHY_2213 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 2684268 12422015 Clo1313_2275 Clostridium thermocellum DSM 1313 DNA adenine methylase YP_005688757.1 2683327 R 637887 CDS YP_005688758.1 385779593 12422016 2684699..2685577 1 NC_017304.1 PFAM: protein of unknown function DUF125 transmembrane; Rubrerythrin; KEGG: hor:Hore_01890 uncharacterized membrane protein; hypothetical protein 2685577 12422016 Clo1313_2276 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688758.1 2684699 D 637887 CDS YP_005688759.1 385779594 12422018 complement(2686228..2687280) 1 NC_017304.1 KEGG: cpy:Cphy_1138 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 2687280 12422018 Clo1313_2278 Clostridium thermocellum DSM 1313 ribosome small subunit-dependent GTPase A YP_005688759.1 2686228 R 637887 CDS YP_005688760.1 385779595 12422019 complement(2687618..2687728) 1 NC_017304.1 hypothetical protein 2687728 12422019 Clo1313_2279 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688760.1 2687618 R 637887 CDS YP_005688761.1 385779596 12422020 complement(2687741..2688850) 1 NC_017304.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: aeh:Mlg_2780 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 2688850 12422020 Clo1313_2280 Clostridium thermocellum DSM 1313 type I phosphodiesterase/nucleotide pyrophosphatase YP_005688761.1 2687741 R 637887 CDS YP_005688762.1 385779597 12422022 2689386..2690309 1 NC_017304.1 KEGG: lin:lin0661 internalin-like protein; hypothetical protein 2690309 12422022 Clo1313_2282 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688762.1 2689386 D 637887 CDS YP_005688763.1 385779598 12422023 2690454..2691683 1 NC_017304.1 KEGG: shi:Shel_22980 SAM-dependent methyltransferase; SAM-dependent methyltransferase 2691683 12422023 Clo1313_2283 Clostridium thermocellum DSM 1313 SAM-dependent methyltransferase YP_005688763.1 2690454 D 637887 CDS YP_005688764.1 385779599 12422024 complement(2691697..2692239) 1 NC_017304.1 manually curated; KEGG: cbe:Cbei_2623 hypothetical protein; hypothetical protein 2692239 12422024 Clo1313_2284 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688764.1 2691697 R 637887 CDS YP_005688765.1 385779600 12422025 complement(2692270..2692848) 1 NC_017304.1 manually curated; KEGG: ssc:100157546 ubiquitin specific peptidase 8; hypothetical protein 2692848 12422025 Clo1313_2285 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688765.1 2692270 R 637887 CDS YP_005688766.1 385779601 12422026 complement(2693221..2694189) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2694189 12422026 Clo1313_2286 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688766.1 2693221 R 637887 CDS YP_005688767.1 385779602 12422027 complement(2694238..2694804) 1 NC_017304.1 KEGG: hsm:HSM_0705 TRAP transporter solute receptor TAXI family protein; hypothetical protein 2694804 12422027 Clo1313_2287 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688767.1 2694238 R 637887 CDS YP_005688768.1 385779603 12422028 complement(2694963..2695601) 1 NC_017304.1 PFAM: NADPH-dependent FMN reductase; KEGG: shi:Shel_00760 hypothetical protein; NADPH-dependent FMN reductase 2695601 12422028 Clo1313_2288 Clostridium thermocellum DSM 1313 NADPH-dependent FMN reductase YP_005688768.1 2694963 R 637887 CDS YP_005688769.1 385779604 12422029 2695878..2697671 1 NC_017304.1 KEGG: hpb:HELPY_1007 putative polysaccharide biosynthesis protein; PFAM: glycosyl transferase group 1; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; group 1 glycosyl transferase 2697671 12422029 Clo1313_2289 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005688769.1 2695878 D 637887 CDS YP_005688770.1 385779605 12422030 complement(2697703..2698776) 1 NC_017304.1 KEGG: sth:STH2580 hypothetical protein; hypothetical protein 2698776 12422030 Clo1313_2290 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688770.1 2697703 R 637887 CDS YP_005688771.1 385779606 12422031 complement(2699020..2700888) 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: ckr:CKR_0316 hypothetical protein; hypothetical protein 2700888 12422031 Clo1313_2291 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688771.1 2699020 R 637887 CDS YP_005688772.1 385779607 12422032 complement(2700875..2701639) 1 NC_017304.1 KEGG: clj:CLJU_c14420 putative ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2701639 12422032 Clo1313_2292 Clostridium thermocellum DSM 1313 ABC transporter YP_005688772.1 2700875 R 637887 CDS YP_005688773.1 385779608 12422033 complement(2701767..2702798) 1 NC_017304.1 KEGG: ckr:CKR_0312 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2702798 12422033 Clo1313_2293 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005688773.1 2701767 R 637887 CDS YP_005688774.1 385779609 12422034 complement(2702795..2703469) 1 NC_017304.1 KEGG: clj:CLJU_c14390 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein; winged helix family two component transcriptional regulator 2703469 12422034 Clo1313_2294 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005688774.1 2702795 R 637887 CDS YP_005688775.1 385779610 12422036 complement(2705756..2706421) 1 NC_017304.1 KEGG: mac:MA1341 FMN-binding protein; manually curated; PFAM: flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 2706421 12422036 Clo1313_2296 Clostridium thermocellum DSM 1313 flavin reductase domain-containing FMN-binding protein YP_005688775.1 2705756 R 637887 CDS YP_005688776.1 385779611 12422038 complement(2706854..2708491) 1 NC_017304.1 KEGG: tye:THEYE_A1993 chromosome segregation SMC protein, putative; hypothetical protein 2708491 12422038 Clo1313_2298 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688776.1 2706854 R 637887 CDS YP_005688777.1 385779612 12422039 complement(2708967..2709731) 1 NC_017304.1 KEGG: ckr:CKR_2198 hypothetical protein; hypothetical protein 2709731 12422039 Clo1313_2299 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688777.1 2708967 R 637887 CDS YP_005688778.1 385779613 12422040 complement(2709728..2710645) 1 NC_017304.1 KEGG: cdf:CD0293 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2710645 12422040 Clo1313_2300 Clostridium thermocellum DSM 1313 ABC transporter YP_005688778.1 2709728 R 637887 CDS YP_005688779.1 385779614 12422041 complement(2710646..2710852) 1 NC_017304.1 manually curated; KEGG: lrl:LC705_00137 hypothetical protein; hypothetical protein 2710852 12422041 Clo1313_2301 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688779.1 2710646 R 637887 CDS YP_005688780.1 385779615 12422042 complement(2710893..2712017) 1 NC_017304.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: clj:CLJU_c40130 transcriptional regulator; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2712017 12422042 Clo1313_2302 Clostridium thermocellum DSM 1313 helix-turn-helix domain-containing protein YP_005688780.1 2710893 R 637887 CDS YP_005688781.1 385779616 12422043 complement(2712239..2714344) 1 NC_017304.1 KEGG: tmt:Tmath_1325 glutamine synthetase catalytic region; manually curated; PFAM: glutamine synthetase catalytic region; glutamine synthetase 2714344 12422043 Clo1313_2303 Clostridium thermocellum DSM 1313 glutamine synthetase YP_005688781.1 2712239 R 637887 CDS YP_005688782.1 385779617 12422044 complement(2714855..2716270) 1 NC_017304.1 SMART: Asn/Gln amidotransferase; manually curated; KEGG: csc:Csac_0910 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 2716270 12422044 Clo1313_2304 Clostridium thermocellum DSM 1313 glutamyl-tRNA(Gln) amidotransferase subunit B YP_005688782.1 2714855 R 637887 CDS YP_005688783.1 385779618 12422045 complement(2716267..2717727) 1 NC_017304.1 KEGG: csc:Csac_0909 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 2717727 12422045 Clo1313_2305 Clostridium thermocellum DSM 1313 glutamyl-tRNA(Gln) amidotransferase subunit A YP_005688783.1 2716267 R 637887 CDS YP_005688784.1 385779619 12422046 complement(2717724..2718017) 1 NC_017304.1 KEGG: tpd:Teth39_1693 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 2718017 12422046 Clo1313_2306 Clostridium thermocellum DSM 1313 glutamyl-tRNA(Gln) amidotransferase subunit C YP_005688784.1 2717724 R 637887 CDS YP_005688785.1 385779620 12422047 complement(2718080..2719825) 1 NC_017304.1 KEGG: eel:EUBELI_00444 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 2719825 12422047 Clo1313_2307 Clostridium thermocellum DSM 1313 aspartyl-tRNA synthetase YP_005688785.1 2718080 R 637887 CDS YP_005688786.1 385779621 12422049 complement(2721618..2721773) 1 NC_017304.1 KEGG: cpy:Cphy_1657 hypothetical protein; hypothetical protein 2721773 12422049 Clo1313_2309 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688786.1 2721618 R 637887 CDS YP_005688787.1 385779622 12422050 complement(2721938..2723071) 1 NC_017304.1 KEGG: dba:Dbac_0334 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2723071 12422050 Clo1313_2310 Clostridium thermocellum DSM 1313 4Fe-4S ferredoxin YP_005688787.1 2721938 R 637887 CDS YP_005688788.1 385779623 12422051 2723456..2723890 1 NC_017304.1 PFAM: Protein of unknown function DUF2871; KEGG: aoe:Clos_0669 hypothetical protein; hypothetical protein 2723890 12422051 Clo1313_2311 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688788.1 2723456 D 637887 CDS YP_005688789.1 385779624 12422052 complement(2723963..2724709) 1 NC_017304.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sso:SSO2624 enoyl CoA hydratase (PaaF-7); Enoyl-CoA hydratase/isomerase 2724709 12422052 Clo1313_2312 Clostridium thermocellum DSM 1313 Enoyl-CoA hydratase/isomerase YP_005688789.1 2723963 R 637887 CDS YP_005688790.1 385779625 12422054 complement(2724918..2725589) 1 NC_017304.1 PFAM: Methyltransferase type 12; KEGG: mac:MA1733 hypothetical protein; type 12 methyltransferase 2725589 12422054 Clo1313_2314 Clostridium thermocellum DSM 1313 type 12 methyltransferase YP_005688790.1 2724918 R 637887 CDS YP_005688791.1 385779626 12422057 complement(2726957..2727349) 1 NC_017304.1 KEGG: pfd:PFDG_02325 hypothetical protein similar to merozoite antigen erythrocyte-binding ligand; hypothetical protein 2727349 12422057 Clo1313_2317 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688791.1 2726957 R 637887 CDS YP_005688792.1 385779627 12422058 complement(2727599..2728171) 1 NC_017304.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cpy:Cphy_2559 hypothetical protein; flavin reductase domain-containing FMN-binding protein 2728171 12422058 Clo1313_2318 Clostridium thermocellum DSM 1313 flavin reductase domain-containing FMN-binding protein YP_005688792.1 2727599 R 637887 CDS YP_005688793.1 385779628 12422059 complement(2728702..2729229) 1 NC_017304.1 KEGG: afn:Acfer_0164 methylated-DNA/protein-cysteinemethyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 2729229 12422059 Clo1313_2319 Clostridium thermocellum DSM 1313 methylated-DNA--protein-cysteine methyltransferase YP_005688793.1 2728702 R 637887 CDS YP_005688794.1 385779629 12422061 complement(2729536..2730420) 1 NC_017304.1 PFAM: NLPA lipoprotein; KEGG: ckr:CKR_0740 hypothetical protein; NLPA lipoprotein 2730420 12422061 Clo1313_2321 Clostridium thermocellum DSM 1313 NLPA lipoprotein YP_005688794.1 2729536 R 637887 CDS YP_005688795.1 385779630 12422062 complement(2730442..2731152) 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shi:Shel_25820 ABC-type metal ion transport system, permease component; binding-protein-dependent transport system inner membrane protein 2731152 12422062 Clo1313_2322 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005688795.1 2730442 R 637887 CDS YP_005688796.1 385779631 12422063 complement(2731192..2732013) 1 NC_017304.1 KEGG: ckr:CKR_0738 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2732013 12422063 Clo1313_2323 Clostridium thermocellum DSM 1313 ABC transporter YP_005688796.1 2731192 R 637887 CDS YP_005688797.1 385779632 12422064 complement(2732469..2732915) 1 NC_017304.1 manually curated; TIGRFAM: transcriptional regulator, Rrf2 family; KEGG: cce:Ccel_0924 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator 2732915 12422064 Clo1313_2324 Clostridium thermocellum DSM 1313 AsnC family transcriptional regulator YP_005688797.1 2732469 R 637887 CDS YP_005688798.1 385779633 12422065 2733273..2734436 1 NC_017304.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: fsu:Fisuc_1079 cystathionine gamma-synthase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 2734436 12422065 Clo1313_2325 Clostridium thermocellum DSM 1313 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_005688798.1 2733273 D 637887 CDS YP_005688799.1 385779634 12422066 2734433..2735341 1 NC_017304.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cpy:Cphy_1228 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 2735341 12422066 Clo1313_2326 Clostridium thermocellum DSM 1313 pyridoxal-5'-phosphate-dependent protein subunit beta YP_005688799.1 2734433 D 637887 CDS YP_005688800.1 385779635 12422067 2735353..2735787 1 NC_017304.1 KEGG: bll:BLJ_0857 hypothetical protein; hypothetical protein 2735787 12422067 Clo1313_2327 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688800.1 2735353 D 637887 CDS YP_005688801.1 385779636 12422068 2735759..2736970 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: bde:BDP_1014 hypothetical protein; hypothetical protein 2736970 12422068 Clo1313_2328 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688801.1 2735759 D 637887 CDS YP_005688802.1 385779637 12422069 2736972..2737643 1 NC_017304.1 KEGG: fnu:FN1348 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2737643 12422069 Clo1313_2329 Clostridium thermocellum DSM 1313 ABC transporter YP_005688802.1 2736972 D 637887 CDS YP_005688803.1 385779638 12422070 2737748..2738287 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY3675 hypothetical protein; N-acetyltransferase GCN5 2738287 12422070 Clo1313_2330 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005688803.1 2737748 D 637887 CDS YP_005688804.1 385779639 12422071 2738232..2739707 1 NC_017304.1 KEGG: ckr:CKR_0741 hypothetical protein; manually curated; PFAM: oxidoreductase/nitrogenase component 1; oxidoreductase/nitrogenase component 1 2739707 12422071 Clo1313_2331 Clostridium thermocellum DSM 1313 oxidoreductase/nitrogenase component 1 YP_005688804.1 2738232 D 637887 CDS YP_005688805.1 385779640 12422072 2739704..2741047 1 NC_017304.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbe:Cbei_0621 nitrogenase; oxidoreductase/nitrogenase component 1 2741047 12422072 Clo1313_2332 Clostridium thermocellum DSM 1313 oxidoreductase/nitrogenase component 1 YP_005688805.1 2739704 D 637887 CDS YP_005688806.1 385779641 12422073 2741061..2741396 1 NC_017304.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cbe:Cbei_0627 dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 2741396 12422073 Clo1313_2333 Clostridium thermocellum DSM 1313 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_005688806.1 2741061 D 637887 CDS YP_005688807.1 385779642 12422074 2741409..2742284 1 NC_017304.1 KEGG: fsu:Fisuc_1076 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2742284 12422074 Clo1313_2334 Clostridium thermocellum DSM 1313 radical SAM protein YP_005688807.1 2741409 D 637887 CDS YP_005688808.1 385779643 12422075 2742556..2743872 1 NC_017304.1 KEGG: ckr:CKR_1913 hypothetical protein; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cysteine synthase 2743872 12422075 Clo1313_2335 Clostridium thermocellum DSM 1313 cysteine synthase YP_005688808.1 2742556 D 637887 CDS YP_005688809.1 385779644 12422076 2743897..2744958 1 NC_017304.1 SMART: extracellular solute-binding protein family 3; KEGG: cbe:Cbei_0604 NMT1/THI5-like protein; family 3 extracellular solute-binding protein 2744958 12422076 Clo1313_2336 Clostridium thermocellum DSM 1313 family 3 extracellular solute-binding protein YP_005688809.1 2743897 D 637887 CDS YP_005688810.1 385779645 12422077 2745039..2746106 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ckr:CKR_1910 hypothetical protein; binding-protein-dependent transport system inner membrane protein 2746106 12422077 Clo1313_2337 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005688810.1 2745039 D 637887 CDS YP_005688811.1 385779646 12422078 2746103..2746906 1 NC_017304.1 KEGG: ckr:CKR_1909 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2746906 12422078 Clo1313_2338 Clostridium thermocellum DSM 1313 ABC transporter YP_005688811.1 2746103 D 637887 CDS YP_005688812.1 385779647 12422079 2746927..2747781 1 NC_017304.1 TIGRFAM: nitrogenase iron protein; KEGG: cbe:Cbei_0623 nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 2747781 12422079 Clo1313_2339 Clostridium thermocellum DSM 1313 nitrogenase iron protein YP_005688812.1 2746927 D 637887 CDS YP_005688813.1 385779648 12422080 complement(2748133..2748876) 1 NC_017304.1 KEGG: pay:PAU_03340 hypothetical protein; hypothetical protein 2748876 12422080 Clo1313_2340 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688813.1 2748133 R 637887 CDS YP_005688814.1 385779649 12422081 2749552..2750262 1 NC_017304.1 KEGG: cpy:Cphy_0752 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; purine nucleoside phosphorylase 2750262 12422081 Clo1313_2341 Clostridium thermocellum DSM 1313 purine nucleoside phosphorylase YP_005688814.1 2749552 D 637887 CDS YP_005688815.1 385779650 12422082 2750345..2751412 1 NC_017304.1 PFAM: basic membrane lipoprotein; KEGG: tmt:Tmath_0512 basic membrane lipoprotein; basic membrane lipoprotein 2751412 12422082 Clo1313_2342 Clostridium thermocellum DSM 1313 basic membrane lipoprotein YP_005688815.1 2750345 D 637887 CDS YP_005688816.1 385779651 12422083 2751482..2753011 1 NC_017304.1 KEGG: cbl:CLK_3052 hypothetical protein; hypothetical protein 2753011 12422083 Clo1313_2343 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688816.1 2751482 D 637887 CDS YP_005688817.1 385779652 12422084 2753014..2753856 1 NC_017304.1 KEGG: cbf:CLI_3805 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; (formate-C-acetyltransferase)-activating protein 2753856 12422084 Clo1313_2344 Clostridium thermocellum DSM 1313 (formate-C-acetyltransferase)-activating protein YP_005688817.1 2753014 D 637887 CDS YP_005688818.1 385779653 12422085 2753918..2755480 1 NC_017304.1 KEGG: gyc:GYMC61_2069 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2755480 12422085 Clo1313_2345 Clostridium thermocellum DSM 1313 ABC transporter YP_005688818.1 2753918 D 637887 CDS YP_005688819.1 385779654 12422086 2755455..2756573 1 NC_017304.1 PFAM: inner-membrane translocator; KEGG: fma:FMG_1011 ribose/galactoside ABC transporter permease protein; inner-membrane translocator 2756573 12422086 Clo1313_2346 Clostridium thermocellum DSM 1313 inner-membrane translocator YP_005688819.1 2755455 D 637887 CDS YP_005688820.1 385779655 12422087 2756574..2757509 1 NC_017304.1 PFAM: inner-membrane translocator; KEGG: fma:FMG_1010 ribose/galactoside ABC transporter permease protein; inner-membrane translocator 2757509 12422087 Clo1313_2347 Clostridium thermocellum DSM 1313 inner-membrane translocator YP_005688820.1 2756574 D 637887 CDS YP_005688821.1 385779656 12422088 2757591..2758007 1 NC_017304.1 KEGG: clo:HMPREF0868_0651 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; cytidine deaminase 2758007 12422088 Clo1313_2348 Clostridium thermocellum DSM 1313 cytidine deaminase YP_005688821.1 2757591 D 637887 CDS YP_005688822.1 385779657 12422089 2758064..2758732 1 NC_017304.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: cpy:Cphy_0753 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 2758732 12422089 Clo1313_2349 Clostridium thermocellum DSM 1313 deoxyribose-phosphate aldolase YP_005688822.1 2758064 D 637887 CDS YP_005688823.1 385779658 12422090 complement(2758958..2759737) 1 NC_017304.1 KEGG: gym:GYMC10_1096 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver; AraC family two component transcriptional regulator 2759737 12422090 Clo1313_2350 Clostridium thermocellum DSM 1313 AraC family two component transcriptional regulator YP_005688823.1 2758958 R 637887 CDS YP_005688824.1 385779659 12422091 complement(2759730..2761454) 1 NC_017304.1 KEGG: bcl:ABC3647 two-component sensor histidine kinase; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS 2761454 12422091 Clo1313_2351 Clostridium thermocellum DSM 1313 signal transduction histidine kinase LytS YP_005688824.1 2759730 R 637887 CDS YP_005688825.1 385779660 12422092 complement(2761565..2763220) 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: clo:HMPREF0868_0301 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 2763220 12422092 Clo1313_2352 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005688825.1 2761565 R 637887 CDS YP_005688826.1 385779661 12422093 complement(2763217..2764320) 1 NC_017304.1 KEGG: fnu:FN0376 iron(III)-transport ATP-binding protein SfuC; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 2764320 12422093 Clo1313_2353 Clostridium thermocellum DSM 1313 ABC transporter YP_005688826.1 2763217 R 637887 CDS YP_005688827.1 385779662 12422094 complement(2764458..2765564) 1 NC_017304.1 PFAM: extracellular solute-binding protein family 1; KEGG: clo:HMPREF0868_0299 bacterial extracellular solute-binding protein; extracellular solute-binding protein 2765564 12422094 Clo1313_2354 Clostridium thermocellum DSM 1313 extracellular solute-binding protein YP_005688827.1 2764458 R 637887 CDS YP_005688828.1 385779663 12422095 2765872..2766234 1 NC_017304.1 PFAM: Penicillinase repressor; KEGG: hmo:HM1_2921 hypothetical protein; CopY family transcriptional repressor 2766234 12422095 Clo1313_2355 Clostridium thermocellum DSM 1313 CopY family transcriptional repressor YP_005688828.1 2765872 D 637887 CDS YP_005688829.1 385779664 12422096 2766235..2768499 1 NC_017304.1 PFAM: peptidase M56 BlaR1; KEGG: ckr:CKR_3089 hypothetical protein; peptidase M56 BlaR1 2768499 12422096 Clo1313_2356 Clostridium thermocellum DSM 1313 peptidase M56 BlaR1 YP_005688829.1 2766235 D 637887 CDS YP_005688830.1 385779665 12422097 complement(2768879..2769013) 1 NC_017304.1 hypothetical protein 2769013 12422097 Clo1313_2357 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688830.1 2768879 R 637887 CDS YP_005688831.1 385779666 12422098 complement(2769122..2769535) 1 NC_017304.1 KEGG: amr:AM1_C0042 hypothetical protein; hypothetical protein 2769535 12422098 Clo1313_2358 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688831.1 2769122 R 637887 CDS YP_005688832.1 385779667 12422099 2769981..2771117 1 NC_017304.1 TIGRFAM: glycerate kinase; KEGG: tde:TDE0208 glycerate kinase; PFAM: glycerate kinase; glycerate kinase 2771117 12422099 Clo1313_2359 Clostridium thermocellum DSM 1313 glycerate kinase YP_005688832.1 2769981 D 637887 CDS YP_005688833.1 385779668 12422101 2771484..2771672 1 NC_017304.1 KEGG: bts:Btus_2106 hypothetical protein; hypothetical protein 2771672 12422101 Clo1313_2361 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688833.1 2771484 D 637887 CDS YP_005688834.1 385779669 12422105 complement(2773486..2774931) 1 NC_017304.1 PFAM: PglZ domain protein; KEGG: tit:Thit_1347 PglZ domain protein; PglZ domain-containing protein 2774931 12422105 Clo1313_2365 Clostridium thermocellum DSM 1313 PglZ domain-containing protein YP_005688834.1 2773486 R 637887 CDS YP_005688835.1 385779670 12422106 complement(2774936..2777605) 1 NC_017304.1 KEGG: tpd:Teth39_0928 helicase domain-containing protein; PFAM: SNF2-related protein; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SNF2-like protein 2777605 12422106 Clo1313_2366 Clostridium thermocellum DSM 1313 SNF2-like protein YP_005688835.1 2774936 R 637887 CDS YP_005688836.1 385779671 12422107 complement(2777616..2780171) 1 NC_017304.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tpd:Teth39_0927 DNA methylase N-4/N-6 domain-containing protein; DNA methylase N-4/N-6 domain-containing protein 2780171 12422107 Clo1313_2367 Clostridium thermocellum DSM 1313 DNA methylase N-4/N-6 domain-containing protein YP_005688836.1 2777616 R 637887 CDS YP_005688837.1 385779672 12422109 complement(2783692..2784843) 1 NC_017304.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: cce:Ccel_2178 transposase IS3/IS911 family protein; integrase catalytic subunit 2784843 12422109 Clo1313_2369 Clostridium thermocellum DSM 1313 integrase catalytic subunit YP_005688837.1 2783692 R 637887 CDS YP_005688838.1 385779673 12422110 complement(2785392..2786360) 1 NC_017304.1 KEGG: mif:Metin_0662 TPR repeat-containing protein; manually curated; PFAM: Protein of unknown function DUF2971; hypothetical protein 2786360 12422110 Clo1313_2370 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688838.1 2785392 R 637887 CDS YP_005688839.1 385779674 12422111 complement(2786450..2787190) 1 NC_017304.1 manually curated; PFAM: HhH-GPD family protein; KEGG: bhy:BHWA1_00690 hypothetical protein; SMART: iron-sulfur cluster loop; HhH-GPD family protein 2787190 12422111 Clo1313_2371 Clostridium thermocellum DSM 1313 HhH-GPD family protein YP_005688839.1 2786450 R 637887 CDS YP_005688840.1 385779675 12422112 complement(2787235..2787636) 1 NC_017304.1 KEGG: pth:PTH_1527 hypothetical protein; hypothetical protein 2787636 12422112 Clo1313_2372 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688840.1 2787235 R 637887 CDS YP_005688841.1 385779676 12422113 complement(2787675..2788505) 1 NC_017304.1 KEGG: ssp:SSP0073 putative restriction endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2788505 12422113 Clo1313_2373 Clostridium thermocellum DSM 1313 HNH endonuclease YP_005688841.1 2787675 R 637887 CDS YP_005688842.1 385779677 12422114 complement(2788498..2788893) 1 NC_017304.1 PFAM: NUDIX hydrolase; KEGG: rbi:RB2501_07100 NUDIX (MutT) family hydrolase/pyrophosphatase; NUDIX hydrolase 2788893 12422114 Clo1313_2374 Clostridium thermocellum DSM 1313 NUDIX hydrolase YP_005688842.1 2788498 R 637887 CDS YP_005688843.1 385779678 12422115 complement(2789134..2790183) 1 NC_017304.1 KEGG: tde:TDE1752 ISTde2, transposase; manually curated; PFAM: Integrase catalytic region; integrase catalytic subunit 2790183 12422115 Clo1313_2375 Clostridium thermocellum DSM 1313 integrase catalytic subunit YP_005688843.1 2789134 R 637887 CDS YP_005688844.1 385779679 12422116 complement(2790364..2791932) 1 NC_017304.1 KEGG: pmo:Pmob_0430 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SMART: Resolvase domain; resolvase domain-containing protein 2791932 12422116 Clo1313_2376 Clostridium thermocellum DSM 1313 resolvase domain-containing protein YP_005688844.1 2790364 R 637887 CDS YP_005688845.1 385779680 12422117 complement(2791895..2792350) 1 NC_017304.1 PFAM: Recombinase; KEGG: ckr:CKR_2322 hypothetical protein; recombinase 2792350 12422117 Clo1313_2377 Clostridium thermocellum DSM 1313 recombinase YP_005688845.1 2791895 R 637887 CDS YP_005688846.1 385779681 12422118 complement(2792350..2793918) 1 NC_017304.1 PFAM: Resolvase domain; Recombinase; KEGG: pmo:Pmob_0428 resolvase domain-containing protein; resolvase domain-containing protein 2793918 12422118 Clo1313_2378 Clostridium thermocellum DSM 1313 resolvase domain-containing protein YP_005688846.1 2792350 R 637887 CDS YP_005688847.1 385779682 12422119 complement(2793980..2794198) 1 NC_017304.1 KEGG: pmo:Pmob_0427 hypothetical protein; hypothetical protein 2794198 12422119 Clo1313_2379 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688847.1 2793980 R 637887 CDS YP_005688848.1 385779683 12422120 complement(2794252..2795256) 1 NC_017304.1 KEGG: pmo:Pmob_0425 peptidoglycan-binding LysM; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding lysin domain; SMART: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding LysM; N-acetylmuramoyl-L-alanine amidase family protein 2795256 12422120 Clo1313_2380 Clostridium thermocellum DSM 1313 N-acetylmuramoyl-L-alanine amidase family protein YP_005688848.1 2794252 R 637887 CDS YP_005688849.1 385779684 12422121 complement(2795253..2795672) 1 NC_017304.1 KEGG: pmo:Pmob_0424 toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; toxin secretion/phage lysis holin 2795672 12422121 Clo1313_2381 Clostridium thermocellum DSM 1313 toxin secretion/phage lysis holin YP_005688849.1 2795253 R 637887 CDS YP_005688850.1 385779685 12422122 complement(2795759..2798227) 1 NC_017304.1 KEGG: hmo:HM1_2869 hypothetical protein; hypothetical protein 2798227 12422122 Clo1313_2382 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688850.1 2795759 R 637887 CDS YP_005688851.1 385779686 12422123 complement(2798224..2798799) 1 NC_017304.1 KEGG: hmo:HM1_2870 hypothetical protein; hypothetical protein 2798799 12422123 Clo1313_2383 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688851.1 2798224 R 637887 CDS YP_005688852.1 385779687 12422124 complement(2798809..2799003) 1 NC_017304.1 KEGG: tex:Teth514_1266 hypothetical protein; hypothetical protein 2799003 12422124 Clo1313_2384 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688852.1 2798809 R 637887 CDS YP_005688853.1 385779688 12422125 complement(2799014..2801536) 1 NC_017304.1 TIGRFAM: phage minor structural protein; KEGG: hmo:HM1_2871 phage minor structural protein, N-terminal; phage minor structural protein 2801536 12422125 Clo1313_2385 Clostridium thermocellum DSM 1313 phage minor structural protein YP_005688853.1 2799014 R 637887 CDS YP_005688854.1 385779689 12422126 complement(2801541..2802314) 1 NC_017304.1 KEGG: hmo:HM1_2872 phage tail component, N-terminal domain, putative; TIGRFAM: phage tail component; PFAM: tail component family protein; phage tail component 2802314 12422126 Clo1313_2386 Clostridium thermocellum DSM 1313 phage tail component YP_005688854.1 2801541 R 637887 CDS YP_005688855.1 385779690 12422127 complement(2802328..2804514) 1 NC_017304.1 KEGG: cce:Ccel_2825 hypothetical protein; hypothetical protein 2804514 12422127 Clo1313_2387 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688855.1 2802328 R 637887 CDS YP_005688856.1 385779691 12422128 complement(2804542..2804733) 1 NC_017304.1 KEGG: hmo:HM1_2968 hypothetical protein; hypothetical protein 2804733 12422128 Clo1313_2388 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688856.1 2804542 R 637887 CDS YP_005688857.1 385779692 12422129 complement(2804730..2805113) 1 NC_017304.1 KEGG: hmo:HM1_2874 hypothetical protein; hypothetical protein 2805113 12422129 Clo1313_2389 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688857.1 2804730 R 637887 CDS YP_005688858.1 385779693 12422130 complement(2805113..2805712) 1 NC_017304.1 TIGRFAM: phage major tail protein, phi13 family; KEGG: hmo:HM1_2875 phage major tail protein, phi13 family; phage major tail protein, phi13 family 2805712 12422130 Clo1313_2390 Clostridium thermocellum DSM 1313 phage major tail protein, phi13 family YP_005688858.1 2805113 R 637887 CDS YP_005688859.1 385779694 12422131 complement(2805718..2806062) 1 NC_017304.1 KEGG: hmo:HM1_2876 hypothetical protein; hypothetical protein 2806062 12422131 Clo1313_2391 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688859.1 2805718 R 637887 CDS YP_005688860.1 385779695 12422132 complement(2806059..2806490) 1 NC_017304.1 TIGRFAM: phage protein, HK97 gp10 family; KEGG: hmo:HM1_2877 phage protein, hk97 GP10 family, putative; phage protein, HK97 gp10 family 2806490 12422132 Clo1313_2392 Clostridium thermocellum DSM 1313 phage protein, HK97 gp10 family YP_005688860.1 2806059 R 637887 CDS YP_005688861.1 385779696 12422133 complement(2806507..2806842) 1 NC_017304.1 PFAM: head-tail joining family protein; KEGG: hmo:HM1_2878 phage head-tail adaptor, putative; head-tail joining family protein 2806842 12422133 Clo1313_2393 Clostridium thermocellum DSM 1313 head-tail joining family protein YP_005688861.1 2806507 R 637887 CDS YP_005688862.1 385779697 12422134 complement(2806845..2807153) 1 NC_017304.1 PFAM: Bacteriophage QLRG family, putative DNA packaging; KEGG: hmo:HM1_2879 phage protein, uncharacterized; bacteriophage QLRG family DNA packaging 2807153 12422134 Clo1313_2394 Clostridium thermocellum DSM 1313 bacteriophage QLRG family DNA packaging YP_005688862.1 2806845 R 637887 CDS YP_005688863.1 385779698 12422135 complement(2807174..2808376) 1 NC_017304.1 TIGRFAM: phage major capsid protein, HK97 family; KEGG: hmo:HM1_2880 phage major capsid protein, hk97 family; phage major capsid protein, HK97 family 2808376 12422135 Clo1313_2395 Clostridium thermocellum DSM 1313 phage major capsid protein, HK97 family YP_005688863.1 2807174 R 637887 CDS YP_005688864.1 385779699 12422136 complement(2808390..2809115) 1 NC_017304.1 PFAM: peptidase S14 ClpP; KEGG: hmo:HM1_2881 peptidase S14, ClpP; peptidase S14 ClpP 2809115 12422136 Clo1313_2396 Clostridium thermocellum DSM 1313 peptidase S14 ClpP YP_005688864.1 2808390 R 637887 CDS YP_005688865.1 385779700 12422137 complement(2809054..2810376) 1 NC_017304.1 KEGG: hmo:HM1_2882 phage portal protein, hk97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 2810376 12422137 Clo1313_2397 Clostridium thermocellum DSM 1313 phage portal protein, HK97 family YP_005688865.1 2809054 R 637887 CDS YP_005688866.1 385779701 12422138 complement(2810373..2813042) 1 NC_017304.1 PFAM: Terminase; KEGG: bse:Bsel_0788 terminase; terminase 2813042 12422138 Clo1313_2398 Clostridium thermocellum DSM 1313 terminase YP_005688866.1 2810373 R 637887 CDS YP_005688867.1 385779702 12422139 complement(2813097..2813291) 1 NC_017304.1 KEGG: hmo:HM1_2957 hypothetical protein; hypothetical protein 2813291 12422139 Clo1313_2399 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688867.1 2813097 R 637887 CDS YP_005688868.1 385779703 12422140 complement(2813295..2813762) 1 NC_017304.1 PFAM: AIG2 family protein; KEGG: hmo:HM1_2884 hypothetical protein; AIG2 family protein 2813762 12422140 Clo1313_2400 Clostridium thermocellum DSM 1313 AIG2 family protein YP_005688868.1 2813295 R 637887 CDS YP_005688869.1 385779704 12422141 complement(2813825..2814724) 1 NC_017304.1 PFAM: Putative amidoligase enzyme; KEGG: ckr:CKR_2345 hypothetical protein; amidoligase 2814724 12422141 Clo1313_2401 Clostridium thermocellum DSM 1313 amidoligase YP_005688869.1 2813825 R 637887 CDS YP_005688870.1 385779705 12422142 complement(2814866..2815096) 1 NC_017304.1 KEGG: hmo:HM1_2887 hypothetical protein; hypothetical protein 2815096 12422142 Clo1313_2402 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688870.1 2814866 R 637887 CDS YP_005688871.1 385779706 12422143 complement(2815093..2815428) 1 NC_017304.1 KEGG: hmo:HM1_2888 hypothetical protein; hypothetical protein 2815428 12422143 Clo1313_2403 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688871.1 2815093 R 637887 CDS YP_005688872.1 385779707 12422144 complement(2815421..2816113) 1 NC_017304.1 KEGG: hmo:HM1_2889 hypothetical protein; hypothetical protein 2816113 12422144 Clo1313_2404 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688872.1 2815421 R 637887 CDS YP_005688873.1 385779708 12422145 complement(2816230..2817483) 1 NC_017304.1 KEGG: hmo:HM1_2890 DNA methylase, family protein; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; DNA methylase N-4/N-6 domain-containing protein 2817483 12422145 Clo1313_2405 Clostridium thermocellum DSM 1313 DNA methylase N-4/N-6 domain-containing protein YP_005688873.1 2816230 R 637887 CDS YP_005688874.1 385779709 12422146 complement(2817489..2818787) 1 NC_017304.1 KEGG: hmo:HM1_2891 DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; DNA methylase N-4/N-6 domain-containing protein 2818787 12422146 Clo1313_2406 Clostridium thermocellum DSM 1313 DNA methylase N-4/N-6 domain-containing protein YP_005688874.1 2817489 R 637887 CDS YP_005688875.1 385779710 12422147 complement(2818789..2819340) 1 NC_017304.1 KEGG: hmo:HM1_2892 hypothetical protein; hypothetical protein 2819340 12422147 Clo1313_2407 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688875.1 2818789 R 637887 CDS YP_005688876.1 385779711 12422148 complement(2819461..2819820) 1 NC_017304.1 KEGG: tex:Teth514_1241 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 2819820 12422148 Clo1313_2408 Clostridium thermocellum DSM 1313 HNH endonuclease YP_005688876.1 2819461 R 637887 CDS YP_005688877.1 385779712 12422149 complement(2819943..2820185) 1 NC_017304.1 manually curated; KEGG: clj:CLJU_c03450 hypothetical protein; hypothetical protein 2820185 12422149 Clo1313_2409 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688877.1 2819943 R 637887 CDS YP_005688878.1 385779713 12422150 complement(2820312..2820767) 1 NC_017304.1 KEGG: tex:Teth514_1240 hypothetical protein; hypothetical protein 2820767 12422150 Clo1313_2410 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688878.1 2820312 R 637887 CDS YP_005688879.1 385779714 12422151 complement(2820874..2821161) 1 NC_017304.1 PFAM: VRR-NUC domain-containing protein; KEGG: hmo:HM1_2894 hypothetical protein; VRR-NUC domain-containing protein 2821161 12422151 Clo1313_2411 Clostridium thermocellum DSM 1313 VRR-NUC domain-containing protein YP_005688879.1 2820874 R 637887 CDS YP_005688880.1 385779715 12422152 complement(2821461..2822996) 1 NC_017304.1 KEGG: cbl:CLK_1342 DNA primase related protein; hypothetical protein 2822996 12422152 Clo1313_2412 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688880.1 2821461 R 637887 CDS YP_005688881.1 385779716 12422154 2823615..2824292 1 NC_017304.1 KEGG: cdl:CDR20291_0400 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2824292 12422154 Clo1313_2414 Clostridium thermocellum DSM 1313 ABC transporter YP_005688881.1 2823615 D 637887 CDS YP_005688882.1 385779717 12422155 2824289..2826808 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: cac:CA_C2731 permease; hypothetical protein 2826808 12422155 Clo1313_2415 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688882.1 2824289 D 637887 CDS YP_005688883.1 385779718 12422156 complement(2826821..2827828) 1 NC_017304.1 KEGG: apr:Apre_0742 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2827828 12422156 Clo1313_2416 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005688883.1 2826821 R 637887 CDS YP_005688884.1 385779719 12422157 complement(2827828..2828502) 1 NC_017304.1 KEGG: cdl:CDR20291_0403 two-component response regulator; PFAM: transcriptional regulator domain-containing protein; response regulator receiver; SMART: response regulator receiver; winged helix family two component transcriptional regulator 2828502 12422157 Clo1313_2417 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005688884.1 2827828 R 637887 CDS YP_005688885.1 385779720 12422158 complement(2828920..2829696) 1 NC_017304.1 KEGG: ote:Oter_2963 beta-lactamase domain-containing protein; hypothetical protein 2829696 12422158 Clo1313_2418 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688885.1 2828920 R 637887 CDS YP_005688886.1 385779721 12422161 complement(2831860..2832396) 1 NC_017304.1 KEGG: esi:Exig_0440 hypothetical protein; hypothetical protein 2832396 12422161 Clo1313_2421 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688886.1 2831860 R 637887 CDS YP_005688887.1 385779722 12422162 complement(2832429..2833151) 1 NC_017304.1 KEGG: aoe:Clos_1847 hypothetical protein; hypothetical protein 2833151 12422162 Clo1313_2422 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688887.1 2832429 R 637887 CDS YP_005688888.1 385779723 12422163 complement(2833178..2833336) 1 NC_017304.1 hypothetical protein 2833336 12422163 Clo1313_2423 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688888.1 2833178 R 637887 CDS YP_005688889.1 385779724 12422164 complement(2834143..2834280) 1 NC_017304.1 hypothetical protein 2834280 12422164 Clo1313_2424 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688889.1 2834143 R 637887 CDS YP_005688890.1 385779725 12422165 complement(2834291..2835658) 1 NC_017304.1 manually curated; TIGRFAM: RNA methyltransferase, TrmA family; KEGG: cce:Ccel_2868 RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; Methyltransferase type 11; (Uracil-5)-methyltransferase; TrmA family RNA methyltransferase 2835658 12422165 Clo1313_2425 Clostridium thermocellum DSM 1313 TrmA family RNA methyltransferase YP_005688890.1 2834291 R 637887 CDS YP_005688891.1 385779726 12422166 complement(2835966..2836766) 1 NC_017304.1 manually curated; PFAM: ABC transporter related; KEGG: clj:CLJU_c05840 putative Fe3+ ABC transporter ATPase; SMART: AAA ATPase; ABC transporter 2836766 12422166 Clo1313_2426 Clostridium thermocellum DSM 1313 ABC transporter YP_005688891.1 2835966 R 637887 CDS YP_005688892.1 385779727 12422167 complement(2836767..2837813) 1 NC_017304.1 KEGG: cno:NT01CX_2085 iron (III) dicitrate transport system permease protein; manually curated; PFAM: transport system permease protein; transport system permease 2837813 12422167 Clo1313_2427 Clostridium thermocellum DSM 1313 transport system permease YP_005688892.1 2836767 R 637887 CDS YP_005688893.1 385779728 12422168 complement(2837829..2838785) 1 NC_017304.1 PFAM: periplasmic binding protein; KEGG: cno:NT01CX_2084 iron compound ABC transporter, iron compound-binding protein, putative; periplasmic binding protein 2838785 12422168 Clo1313_2428 Clostridium thermocellum DSM 1313 periplasmic binding protein YP_005688893.1 2837829 R 637887 CDS YP_005688894.1 385779729 12422169 complement(2839287..2840453) 1 NC_017304.1 KEGG: gur:Gura_2274 putative virion core protein (lumpy skin disease virus)-like protein; hypothetical protein 2840453 12422169 Clo1313_2429 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688894.1 2839287 R 637887 CDS YP_005688895.1 385779730 12422170 2840835..2841764 1 NC_017304.1 PFAM: Peptidase M23; KEGG: tpd:Teth39_1491 peptidase M23B; peptidase M23 2841764 12422170 Clo1313_2430 Clostridium thermocellum DSM 1313 peptidase M23 YP_005688895.1 2840835 D 637887 CDS YP_005688896.1 385779731 12422171 2841801..2842238 1 NC_017304.1 PFAM: protein of unknown function DUF583; KEGG: aoe:Clos_0181 hypothetical protein; hypothetical protein 2842238 12422171 Clo1313_2431 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688896.1 2841801 D 637887 CDS YP_005688897.1 385779732 12422172 complement(2842371..2843042) 1 NC_017304.1 KEGG: tte:TTE1683 hypothetical protein; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like; sporulation protein YunB 2843042 12422172 Clo1313_2432 Clostridium thermocellum DSM 1313 sporulation protein YunB YP_005688897.1 2842371 R 637887 CDS YP_005688898.1 385779733 12422173 2843257..2845731 1 NC_017304.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: cce:Ccel_2876 glycosyl transferase family 51; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 2845731 12422173 Clo1313_2433 Clostridium thermocellum DSM 1313 penicillin-binding protein YP_005688898.1 2843257 D 637887 CDS YP_005688899.1 385779734 12422174 complement(2846018..2847226) 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: cce:Ccel_0469 protein of unknown function DUF214; hypothetical protein 2847226 12422174 Clo1313_2434 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688899.1 2846018 R 637887 CDS YP_005688900.1 385779735 12422175 complement(2847245..2848510) 1 NC_017304.1 KEGG: cce:Ccel_0468 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2848510 12422175 Clo1313_2435 Clostridium thermocellum DSM 1313 RND family efflux transporter MFP subunit YP_005688900.1 2847245 R 637887 CDS YP_005688901.1 385779736 12422176 complement(2848507..2849247) 1 NC_017304.1 KEGG: cce:Ccel_0466 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2849247 12422176 Clo1313_2436 Clostridium thermocellum DSM 1313 ABC transporter YP_005688901.1 2848507 R 637887 CDS YP_005688902.1 385779737 12422177 complement(2849462..2850550) 1 NC_017304.1 PFAM: outer membrane efflux protein; KEGG: tjr:TherJR_2832 outer membrane efflux protein; outer membrane efflux protein 2850550 12422177 Clo1313_2437 Clostridium thermocellum DSM 1313 outer membrane efflux protein YP_005688902.1 2849462 R 637887 CDS YP_005688903.1 385779738 12422178 complement(2850565..2851716) 1 NC_017304.1 KEGG: cce:Ccel_3396 outer membrane protein-like protein; hypothetical protein 2851716 12422178 Clo1313_2438 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688903.1 2850565 R 637887 CDS YP_005688904.1 385779739 12422179 complement(2851784..2852617) 1 NC_017304.1 KEGG: cpf:CPF_2904 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; glutamate 5-kinase 2852617 12422179 Clo1313_2439 Clostridium thermocellum DSM 1313 glutamate 5-kinase YP_005688904.1 2851784 R 637887 CDS YP_005688905.1 385779740 12422180 complement(2852861..2853862) 1 NC_017304.1 KEGG: cce:Ccel_0323 hypothetical protein; hypothetical protein 2853862 12422180 Clo1313_2440 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688905.1 2852861 R 637887 CDS YP_005688906.1 385779741 12422181 complement(2853893..2854585) 1 NC_017304.1 KEGG: cce:Ccel_0322 NifU-like domain-containing protein; NifU-like domain-containing protein 2854585 12422181 Clo1313_2441 Clostridium thermocellum DSM 1313 NifU-like domain-containing protein YP_005688906.1 2853893 R 637887 CDS YP_005688907.1 385779742 12422182 2854841..2855233 1 NC_017304.1 KEGG: tet:TTHERM_00729070 hypothetical protein; hypothetical protein 2855233 12422182 Clo1313_2442 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688907.1 2854841 D 637887 CDS YP_005688908.1 385779743 12422183 complement(2855222..2855572) 1 NC_017304.1 KEGG: lba:Lebu_2088 major facilitator superfamily MFS_1; hypothetical protein 2855572 12422183 Clo1313_2443 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688908.1 2855222 R 637887 CDS YP_005688909.1 385779744 12422184 2855814..2856368 1 NC_017304.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cpy:Cphy_3121 rubrerythrin; rubrerythrin 2856368 12422184 Clo1313_2444 Clostridium thermocellum DSM 1313 rubrerythrin YP_005688909.1 2855814 D 637887 CDS YP_005688910.1 385779745 12422186 complement(2856672..2857460) 1 NC_017304.1 PFAM: protein of unknown function DUF218; KEGG: cce:Ccel_2459 protein of unknown function DUF218; hypothetical protein 2857460 12422186 Clo1313_2445 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688910.1 2856672 R 637887 CDS YP_005688911.1 385779746 12422187 complement(2857615..2860059) 1 NC_017304.1 KEGG: cce:Ccel_0802 peptidase S16, lon-like protein; peptidase S16, lon-like protein 2860059 12422187 Clo1313_2446 Clostridium thermocellum DSM 1313 peptidase S16, lon-like protein YP_005688911.1 2857615 R 637887 CDS YP_005688912.1 385779747 12422188 complement(2860341..2860799) 1 NC_017304.1 KEGG: tte:TTE0537 acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 2860799 12422188 Clo1313_2447 Clostridium thermocellum DSM 1313 ribosomal-protein-alanine acetyltransferase YP_005688912.1 2860341 R 637887 CDS YP_005688913.1 385779748 12422189 complement(2860811..2861521) 1 NC_017304.1 PFAM: peptidase M22 glycoprotease; KEGG: cce:Ccel_0800 peptidase M22 glycoprotease; peptidase M22 glycoprotease 2861521 12422189 Clo1313_2448 Clostridium thermocellum DSM 1313 peptidase M22 glycoprotease YP_005688913.1 2860811 R 637887 CDS YP_005688914.1 385779749 12422190 complement(2861518..2862003) 1 NC_017304.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: cce:Ccel_0799 protein of unknown function UPF0079; hypothetical protein 2862003 12422190 Clo1313_2449 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688914.1 2861518 R 637887 CDS YP_005688915.1 385779750 12422191 complement(2861990..2863192) 1 NC_017304.1 PFAM: amidohydrolase; KEGG: cce:Ccel_0798 amidohydrolase; amidohydrolase 2863192 12422191 Clo1313_2450 Clostridium thermocellum DSM 1313 amidohydrolase YP_005688915.1 2861990 R 637887 CDS YP_005688916.1 385779751 12422192 complement(2863488..2864447) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: cpo:COPRO5265_1473 protease, putative; copper amine oxidase-like domain-containing protein 2864447 12422192 Clo1313_2451 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688916.1 2863488 R 637887 CDS YP_005688917.1 385779752 12422193 complement(2865123..2865506) 1 NC_017304.1 KEGG: gwc:GWCH70_1303 hypothetical protein; hypothetical protein 2865506 12422193 Clo1313_2452 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688917.1 2865123 R 637887 CDS YP_005688918.1 385779753 12422194 complement(2865587..2866120) 1 NC_017304.1 KEGG: clj:CLJU_c34990 hypothetical protein; hypothetical protein 2866120 12422194 Clo1313_2453 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688918.1 2865587 R 637887 CDS YP_005688919.1 385779754 12422195 complement(2866484..2866795) 1 NC_017304.1 KEGG: tac:Ta1310 potassium-transporting ATPase subunit A; hypothetical protein 2866795 12422195 Clo1313_2454 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688919.1 2866484 R 637887 CDS YP_005688920.1 385779755 12422196 complement(2867029..2867421) 1 NC_017304.1 PFAM: ribosomal protein S9; KEGG: cce:Ccel_0795 30S ribosomal protein S9; 30S ribosomal protein S9 2867421 12422196 Clo1313_2455 Clostridium thermocellum DSM 1313 30S ribosomal protein S9 YP_005688920.1 2867029 R 637887 CDS YP_005688921.1 385779756 12422197 complement(2867444..2867881) 1 NC_017304.1 KEGG: cce:Ccel_0794 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 2867881 12422197 Clo1313_2456 Clostridium thermocellum DSM 1313 50S ribosomal protein L13 YP_005688921.1 2867444 R 637887 CDS YP_005688922.1 385779757 12422198 2868271..2868666 1 NC_017304.1 KEGG: cce:Ccel_0339 hypothetical protein; hypothetical protein 2868666 12422198 Clo1313_2457 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688922.1 2868271 D 637887 CDS YP_005688923.1 385779758 12422199 complement(2868769..2869851) 1 NC_017304.1 PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; KEGG: cce:Ccel_0337 DNA integrity scanning protein DisA; DNA integrity scanning protein DisA 2869851 12422199 Clo1313_2458 Clostridium thermocellum DSM 1313 DNA integrity scanning protein DisA YP_005688923.1 2868769 R 637887 CDS YP_005688924.1 385779759 12422200 complement(2869882..2871246) 1 NC_017304.1 TIGRFAM: DNA repair protein RadA; PFAM: Circadian clock protein KaiC central region; KEGG: cdf:CD0027 DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA 2871246 12422200 Clo1313_2459 Clostridium thermocellum DSM 1313 DNA repair protein RadA YP_005688924.1 2869882 R 637887 CDS YP_005688925.1 385779760 12422201 complement(2871246..2873180) 1 NC_017304.1 PFAM: glycoside hydrolase 15-related; KEGG: cce:Ccel_0335 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 2873180 12422201 Clo1313_2460 Clostridium thermocellum DSM 1313 glycoside hydrolase 15-like protein YP_005688925.1 2871246 R 637887 CDS YP_005688926.1 385779761 12422202 2873489..2874745 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: cce:Ccel_0333 glycosyl transferase family 2; family 2 glycosyl transferase 2874745 12422202 Clo1313_2461 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005688926.1 2873489 D 637887 CDS YP_005688927.1 385779762 12422203 complement(2874813..2877269) 1 NC_017304.1 KEGG: cce:Ccel_0327 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; ATPase 2877269 12422203 Clo1313_2462 Clostridium thermocellum DSM 1313 ATPase YP_005688927.1 2874813 R 637887 CDS YP_005688928.1 385779763 12422204 complement(2877315..2878337) 1 NC_017304.1 PFAM: ATP:guanido phosphotransferase; KEGG: cce:Ccel_0326 ATP:guanido phosphotransferase; ATP:guanido phosphotransferase 2878337 12422204 Clo1313_2463 Clostridium thermocellum DSM 1313 ATP:guanido phosphotransferase YP_005688928.1 2877315 R 637887 CDS YP_005688929.1 385779764 12422205 complement(2878378..2878884) 1 NC_017304.1 PFAM: UvrB/UvrC protein; KEGG: cce:Ccel_0325 UvrB/UvrC protein; UvrB/UvrC protein 2878884 12422205 Clo1313_2464 Clostridium thermocellum DSM 1313 UvrB/UvrC protein YP_005688929.1 2878378 R 637887 CDS YP_005688930.1 385779765 12422206 complement(2878931..2879392) 1 NC_017304.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: cce:Ccel_0324 transcriptional repressor, CtsR; transcriptional repressor CtsR 2879392 12422206 Clo1313_2465 Clostridium thermocellum DSM 1313 transcriptional repressor CtsR YP_005688930.1 2878931 R 637887 CDS YP_005688931.1 385779766 12422208 complement(2880622..2882709) 1 NC_017304.1 KEGG: cce:Ccel_2879 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 2882709 12422208 Clo1313_2467 Clostridium thermocellum DSM 1313 translation elongation factor G YP_005688931.1 2880622 R 637887 CDS YP_005688932.1 385779767 12422209 2883253..2884278 1 NC_017304.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cce:Ccel_2880 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 2884278 12422209 Clo1313_2468 Clostridium thermocellum DSM 1313 phospho-2-dehydro-3-deoxyheptonate aldolase YP_005688932.1 2883253 D 637887 CDS YP_005688933.1 385779768 12422210 2884268..2885365 1 NC_017304.1 KEGG: cce:Ccel_2881 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; amino acid-binding ACT domain protein; prephenate dehydrogenase 2885365 12422210 Clo1313_2469 Clostridium thermocellum DSM 1313 prephenate dehydrogenase YP_005688933.1 2884268 D 637887 CDS YP_005688934.1 385779769 12422211 2885455..2886726 1 NC_017304.1 KEGG: tte:TTE1015 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 2886726 12422211 Clo1313_2470 Clostridium thermocellum DSM 1313 3-phosphoshikimate 1-carboxyvinyltransferase YP_005688934.1 2885455 D 637887 CDS YP_005688935.1 385779770 12422212 complement(2886860..2887513) 1 NC_017304.1 PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: cce:Ccel_2882 redox-sensing transcriptional repressor REX; CoA-binding protein 2887513 12422212 Clo1313_2471 Clostridium thermocellum DSM 1313 CoA-binding protein YP_005688935.1 2886860 R 637887 CDS YP_005688936.1 385779771 12422213 2887761..2889677 1 NC_017304.1 KEGG: cce:Ccel_2884 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2889677 12422213 Clo1313_2472 Clostridium thermocellum DSM 1313 ABC transporter YP_005688936.1 2887761 D 637887 CDS YP_005688937.1 385779772 12422214 2889870..2891381 1 NC_017304.1 manually curated; PFAM: Peptidoglycan-binding lysin domain; SH3 type 3 domain protein; glycoside hydrolase family 18; KEGG: cbf:CLI_1294 glycosy hydrolase family protein; SMART: Peptidoglycan-binding LysM; SH3 domain protein; chitinase II; Peptidoglycan-binding lysin domain 2891381 12422214 Clo1313_2473 Clostridium thermocellum DSM 1313 Peptidoglycan-binding lysin domain YP_005688937.1 2889870 D 637887 CDS YP_005688938.1 385779773 12422215 complement(2891415..2892179) 1 NC_017304.1 KEGG: cce:Ccel_1184 cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2892179 12422215 Clo1313_2474 Clostridium thermocellum DSM 1313 ABC transporter YP_005688938.1 2891415 R 637887 CDS YP_005688939.1 385779774 12422216 complement(2892180..2892989) 1 NC_017304.1 KEGG: hmo:HM1_3001 cobalt abc transporter, permease protein CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter permease 2892989 12422216 Clo1313_2475 Clostridium thermocellum DSM 1313 cobalt ABC transporter permease YP_005688939.1 2892180 R 637887 CDS YP_005688940.1 385779775 12422217 complement(2893049..2894107) 1 NC_017304.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: hmo:HM1_3002 cobalamin biosynthesis protein CbiM; cobalamin (vitamin B12) biosynthesis protein CbiM 2894107 12422217 Clo1313_2476 Clostridium thermocellum DSM 1313 cobalamin (vitamin B12) biosynthesis protein CbiM YP_005688940.1 2893049 R 637887 CDS YP_005688941.1 385779776 12422218 complement(2894396..2895118) 1 NC_017304.1 KEGG: cce:Ccel_2890 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 2895118 12422218 Clo1313_2477 Clostridium thermocellum DSM 1313 cell wall hydrolase/autolysin YP_005688941.1 2894396 R 637887 CDS YP_005688942.1 385779777 12422219 complement(2895236..2896168) 1 NC_017304.1 TIGRFAM: diguanylate cyclase; PFAM: response regulator receiver; GGDEF domain containing protein; KEGG: tpd:Teth39_0760 response regulator receiver modulated diguanylate cyclase; SMART: response regulator receiver; GGDEF domain containing protein; response regulator receiver modulated diguanylate cyclase 2896168 12422219 Clo1313_2478 Clostridium thermocellum DSM 1313 response regulator receiver modulated diguanylate cyclase YP_005688942.1 2895236 R 637887 CDS YP_005688943.1 385779778 12422220 complement(2896392..2903294) 1 NC_017304.1 SMART: Ig domain protein group 2 domain protein; KEGG: cce:Ccel_1547 S-layer domain protein; Ig domain-containing protein 2903294 12422220 Clo1313_2479 Clostridium thermocellum DSM 1313 Ig domain-containing protein YP_005688943.1 2896392 R 637887 CDS YP_005688944.1 385779779 12422222 2904627..2904836 1 NC_017304.1 KEGG: cce:Ccel_1874 hypothetical protein; hypothetical protein 2904836 12422222 Clo1313_2481 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688944.1 2904627 D 637887 CDS YP_005688945.1 385779780 12422223 complement(2904937..2906601) 1 NC_017304.1 KEGG: gka:GK1403 hypothetical protein; hypothetical protein 2906601 12422223 Clo1313_2482 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688945.1 2904937 R 637887 CDS YP_005688946.1 385779781 12422224 complement(2906617..2907156) 1 NC_017304.1 KEGG: ckr:CKR_1497 hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 2907156 12422224 Clo1313_2483 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005688946.1 2906617 R 637887 CDS YP_005688947.1 385779782 12422225 complement(2907386..2909638) 1 NC_017304.1 PFAM: peptidase M56 BlaR1; KEGG: dhd:Dhaf_3787 peptidase M56 BlaR1; peptidase M56 BlaR1 2909638 12422225 Clo1313_2484 Clostridium thermocellum DSM 1313 peptidase M56 BlaR1 YP_005688947.1 2907386 R 637887 CDS YP_005688948.1 385779783 12422226 complement(2909641..2910015) 1 NC_017304.1 PFAM: Penicillinase repressor; KEGG: dhd:Dhaf_3788 transcriptional repressor, CopY family; CopY family transcriptional repressor 2910015 12422226 Clo1313_2485 Clostridium thermocellum DSM 1313 CopY family transcriptional repressor YP_005688948.1 2909641 R 637887 CDS YP_005688949.1 385779784 12422227 complement(2910320..2911108) 1 NC_017304.1 PFAM: Urease accessory protein UreD; KEGG: tjr:TherJR_0611 urease accessory protein UreD; urease accessory protein UreD 2911108 12422227 Clo1313_2486 Clostridium thermocellum DSM 1313 urease accessory protein UreD YP_005688949.1 2910320 R 637887 CDS YP_005688950.1 385779785 12422228 complement(2911112..2911720) 1 NC_017304.1 KEGG: hms:HMU03100 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; urease accessory protein UreG 2911720 12422228 Clo1313_2487 Clostridium thermocellum DSM 1313 urease accessory protein UreG YP_005688950.1 2911112 R 637887 CDS YP_005688951.1 385779786 12422229 complement(2911775..2912497) 1 NC_017304.1 PFAM: Urease accessory protein UreF; KEGG: hac:Hac_1536 hypothetical protein; urease accessory protein UreF 2912497 12422229 Clo1313_2488 Clostridium thermocellum DSM 1313 urease accessory protein UreF YP_005688951.1 2911775 R 637887 CDS YP_005688952.1 385779787 12422231 complement(2913076..2914794) 1 NC_017304.1 KEGG: tjr:TherJR_0607 urease, alpha subunit; TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain-containing protein; urease subunit alpha 2914794 12422231 Clo1313_2490 Clostridium thermocellum DSM 1313 urease subunit alpha YP_005688952.1 2913076 R 637887 CDS YP_005688953.1 385779788 12422232 complement(2914796..2915164) 1 NC_017304.1 TIGRFAM: urease, beta subunit; KEGG: hac:Hac_1532 urease subunit alpha; PFAM: Urease beta subunit; urease subunit beta 2915164 12422232 Clo1313_2491 Clostridium thermocellum DSM 1313 urease subunit beta YP_005688953.1 2914796 R 637887 CDS YP_005688954.1 385779789 12422233 complement(2915180..2915482) 1 NC_017304.1 TIGRFAM: urease, gamma subunit; KEGG: fjo:Fjoh_4837 urease subunit gamma; PFAM: Urease gamma subunit region; urease subunit gamma 2915482 12422233 Clo1313_2492 Clostridium thermocellum DSM 1313 urease subunit gamma YP_005688954.1 2915180 R 637887 CDS YP_005688955.1 385779790 12422234 complement(2915653..2916348) 1 NC_017304.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: pjd:Pjdr2_0561 UreA ABC transporter, ATP-binding protein UrtE; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 2916348 12422234 Clo1313_2493 Clostridium thermocellum DSM 1313 urea ABC transporter ATP-binding protein UrtE YP_005688955.1 2915653 R 637887 CDS YP_005688956.1 385779791 12422235 complement(2916341..2917105) 1 NC_017304.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: pjd:Pjdr2_0560 UreA ABC transporter, ATP-binding protein UrtD; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtD 2917105 12422235 Clo1313_2494 Clostridium thermocellum DSM 1313 urea ABC transporter ATP-binding protein UrtD YP_005688956.1 2916341 R 637887 CDS YP_005688957.1 385779792 12422236 complement(2917089..2918237) 1 NC_017304.1 manually curated; TIGRFAM: urea ABC transporter, permease protein UrtC; KEGG: gka:GK1935 ABC transporter (permease); PFAM: inner-membrane translocator; urea ABC transporter permease UrtC 2918237 12422236 Clo1313_2495 Clostridium thermocellum DSM 1313 urea ABC transporter permease UrtC YP_005688957.1 2917089 R 637887 CDS YP_005688958.1 385779793 12422237 complement(2918249..2919157) 1 NC_017304.1 manually curated; TIGRFAM: urea ABC transporter, permease protein UrtB; KEGG: gym:GYMC10_1634 UreA ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease UrtB 2919157 12422237 Clo1313_2496 Clostridium thermocellum DSM 1313 urea ABC transporter permease UrtB YP_005688958.1 2918249 R 637887 CDS YP_005688959.1 385779794 12422238 complement(2919296..2920555) 1 NC_017304.1 KEGG: gct:GC56T3_1585 UreA ABC transporter, UreA binding protein; TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; urea ABC transporter substrate-binding protein 2920555 12422238 Clo1313_2497 Clostridium thermocellum DSM 1313 urea ABC transporter substrate-binding protein YP_005688959.1 2919296 R 637887 CDS YP_005688960.1 385779795 12422239 complement(2921030..2922118) 1 NC_017304.1 KEGG: aoe:Clos_2472 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain; AraC family two component transcriptional regulator 2922118 12422239 Clo1313_2498 Clostridium thermocellum DSM 1313 AraC family two component transcriptional regulator YP_005688960.1 2921030 R 637887 CDS YP_005688961.1 385779796 12422240 complement(2922150..2924948) 1 NC_017304.1 KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; multi-sensor hybrid histidine kinase 2924948 12422240 Clo1313_2499 Clostridium thermocellum DSM 1313 multi-sensor hybrid histidine kinase YP_005688961.1 2922150 R 637887 CDS YP_005688962.1 385779797 12422241 2925239..2926330 1 NC_017304.1 KEGG: lic:LIC12058 histidine kinase response regulator hybrid protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; response regulator receiver sensor signal transduction histidine kinase 2926330 12422241 Clo1313_2500 Clostridium thermocellum DSM 1313 response regulator receiver sensor signal transduction histidine kinase YP_005688962.1 2925239 D 637887 CDS YP_005688963.1 385779798 12422243 complement(2926753..2927727) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2927727 12422243 Clo1313_2502 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688963.1 2926753 R 637887 CDS YP_005688964.1 385779799 12422244 complement(2927766..2928338) 1 NC_017304.1 KEGG: fma:FMG_0224 putative zinc-binding lipoprotein; hypothetical protein 2928338 12422244 Clo1313_2503 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688964.1 2927766 R 637887 CDS YP_005688965.1 385779800 12422245 complement(2928381..2928956) 1 NC_017304.1 KEGG: dwi:Dwil_GK10283 GK10283 gene product from transcript GK10283-RA; hypothetical protein 2928956 12422245 Clo1313_2504 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688965.1 2928381 R 637887 CDS YP_005688966.1 385779801 12422247 complement(2930928..2932142) 1 NC_017304.1 KEGG: cce:Ccel_0509 hypothetical protein; hypothetical protein 2932142 12422247 Clo1313_2506 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688966.1 2930928 R 637887 CDS YP_005688967.1 385779802 12422248 complement(2932219..2934288) 1 NC_017304.1 KEGG: tva:TVAG_233770 ATP-dependent DNA helicase, RecQ family protein; hypothetical protein 2934288 12422248 Clo1313_2507 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688967.1 2932219 R 637887 CDS YP_005688968.1 385779803 12422249 2934418..2935641 1 NC_017304.1 PFAM: transposase mutator type; KEGG: tpd:Teth39_2032 transposase, mutator type; transposase mutator type 2935641 12422249 Clo1313_2508 Clostridium thermocellum DSM 1313 transposase mutator type YP_005688968.1 2934418 D 637887 CDS YP_005688969.1 385779804 12422250 complement(2935846..2936532) 1 NC_017304.1 KEGG: tet:TTHERM_00136030 hypothetical protein; hypothetical protein 2936532 12422250 Clo1313_2509 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688969.1 2935846 R 637887 CDS YP_005688970.1 385779805 12422251 complement(2936552..2937520) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0805 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2937520 12422251 Clo1313_2510 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688970.1 2936552 R 637887 CDS YP_005688971.1 385779806 12422252 complement(2937571..2938134) 1 NC_017304.1 manually curated; KEGG: fma:FMG_0224 putative zinc-binding lipoprotein; hypothetical protein 2938134 12422252 Clo1313_2511 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688971.1 2937571 R 637887 CDS YP_005688972.1 385779807 12422254 complement(2941791..2943005) 1 NC_017304.1 KEGG: cce:Ccel_0509 hypothetical protein; hypothetical protein 2943005 12422254 Clo1313_2515 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688972.1 2941791 R 637887 CDS YP_005688973.1 385779808 12422255 complement(2943082..2945151) 1 NC_017304.1 KEGG: tva:TVAG_233770 ATP-dependent DNA helicase, RecQ family protein; hypothetical protein 2945151 12422255 Clo1313_2516 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688973.1 2943082 R 637887 CDS YP_005688974.1 385779809 12422257 complement(2946818..2949613) 1 NC_017304.1 KEGG: tva:TVAG_233770 ATP-dependent DNA helicase, RecQ family protein; hypothetical protein 2949613 12422257 Clo1313_2518 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688974.1 2946818 R 637887 CDS YP_005688975.1 385779810 12422258 complement(2949634..2950605) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0805 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2950605 12422258 Clo1313_2519 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688975.1 2949634 R 637887 CDS YP_005688976.1 385779811 12422259 complement(2950648..2951232) 1 NC_017304.1 KEGG: pfh:PFHG_00100 conserved hypothetical protein; hypothetical protein 2951232 12422259 Clo1313_2520 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688976.1 2950648 R 637887 CDS YP_005688977.1 385779812 12422260 complement(2951285..2954623) 1 NC_017304.1 KEGG: cce:Ccel_0508 hypothetical protein; hypothetical protein 2954623 12422260 Clo1313_2521 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688977.1 2951285 R 637887 CDS YP_005688978.1 385779813 12422261 complement(2954846..2956063) 1 NC_017304.1 PFAM: transposase IS4 family protein; KEGG: dsy:DSY3434 hypothetical protein; transposase IS4 family protein 2956063 12422261 Clo1313_2522 Clostridium thermocellum DSM 1313 transposase IS4 family protein YP_005688978.1 2954846 R 637887 CDS YP_005688979.1 385779814 12422262 complement(2956293..2957507) 1 NC_017304.1 manually curated; KEGG: cce:Ccel_0509 hypothetical protein; hypothetical protein 2957507 12422262 Clo1313_2523 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688979.1 2956293 R 637887 CDS YP_005688980.1 385779815 12422263 complement(2957584..2960286) 1 NC_017304.1 manually curated; KEGG: pth:PTH_0170 hypothetical protein; hypothetical protein 2960286 12422263 Clo1313_2524 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688980.1 2957584 R 637887 CDS YP_005688981.1 385779816 12422264 complement(2960330..2961139) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: tjr:TherJR_0863 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 2961139 12422264 Clo1313_2525 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005688981.1 2960330 R 637887 CDS YP_005688982.1 385779817 12422265 complement(2961191..2961784) 1 NC_017304.1 KEGG: mpe:MYPE6480 DNA topoisomerase IV subunit B; hypothetical protein 2961784 12422265 Clo1313_2526 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688982.1 2961191 R 637887 CDS YP_005688983.1 385779818 12422267 complement(2965609..2966571) 1 NC_017304.1 KEGG: dae:Dtox_1722 hypothetical protein; hypothetical protein 2966571 12422267 Clo1313_2528 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688983.1 2965609 R 637887 CDS YP_005688984.1 385779819 12422268 complement(2966815..2967324) 1 NC_017304.1 KEGG: tet:TTHERM_00352220 Peptidase family M1 containing protein; hypothetical protein 2967324 12422268 Clo1313_2529 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688984.1 2966815 R 637887 CDS YP_005688985.1 385779820 12422269 complement(2967666..2969525) 1 NC_017304.1 KEGG: cpy:Cphy_0624 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Dockerin type 1; SMART: glycoside hydrolase family 10; glycoside hydrolase 2969525 12422269 Clo1313_2530 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005688985.1 2967666 R 637887 CDS YP_005688986.1 385779821 12422270 2969932..2970993 1 NC_017304.1 manually curated; PFAM: Radical SAM domain protein; KEGG: cpy:Cphy_2083 biotin synthase; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 2970993 12422270 Clo1313_2531 Clostridium thermocellum DSM 1313 radical SAM protein YP_005688986.1 2969932 D 637887 CDS YP_005688987.1 385779822 12422271 complement(2971251..2972186) 1 NC_017304.1 KEGG: dsy:DSY4189 hypothetical protein; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase A 2972186 12422271 Clo1313_2532 Clostridium thermocellum DSM 1313 cysteine synthase A YP_005688987.1 2971251 R 637887 CDS YP_005688988.1 385779823 12422272 complement(2972271..2973080) 1 NC_017304.1 KEGG: cce:Ccel_0923 ExsB family protein; manually curated; PFAM: PP-loop domain protein; PP-loop domain-containing protein 2973080 12422272 Clo1313_2533 Clostridium thermocellum DSM 1313 PP-loop domain-containing protein YP_005688988.1 2972271 R 637887 CDS YP_005688989.1 385779824 12422273 complement(2973086..2974378) 1 NC_017304.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; manually curated; KEGG: dhd:Dhaf_1146 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2974378 12422273 Clo1313_2534 Clostridium thermocellum DSM 1313 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_005688989.1 2973086 R 637887 CDS YP_005688990.1 385779825 12422274 complement(2974439..2974888) 1 NC_017304.1 KEGG: dhd:Dhaf_1145 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator 2974888 12422274 Clo1313_2535 Clostridium thermocellum DSM 1313 AsnC family transcriptional regulator YP_005688990.1 2974439 R 637887 CDS YP_005688991.1 385779826 12422275 complement(2974948..2975409) 1 NC_017304.1 manually curated; TIGRFAM: transcriptional regulator, Rrf2 family; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator 2975409 12422275 Clo1313_2536 Clostridium thermocellum DSM 1313 AsnC family transcriptional regulator YP_005688991.1 2974948 R 637887 CDS YP_005688992.1 385779827 12422276 complement(2975456..2976373) 1 NC_017304.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: tjr:TherJR_2227 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 2976373 12422276 Clo1313_2537 Clostridium thermocellum DSM 1313 homoserine O-succinyltransferase YP_005688992.1 2975456 R 637887 CDS YP_005688993.1 385779828 12422277 complement(2976457..2977848) 1 NC_017304.1 KEGG: cce:Ccel_1713 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2977848 12422277 Clo1313_2538 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005688993.1 2976457 R 637887 CDS YP_005688994.1 385779829 12422278 complement(2977873..2978577) 1 NC_017304.1 KEGG: ckr:CKR_1387 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 2978577 12422278 Clo1313_2539 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005688994.1 2977873 R 637887 CDS YP_005688995.1 385779830 12422279 complement(2978701..2980932) 1 NC_017304.1 KEGG: cce:Ccel_0746 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; copper-translocating P-type ATPase 2980932 12422279 Clo1313_2540 Clostridium thermocellum DSM 1313 copper-translocating P-type ATPase YP_005688995.1 2978701 R 637887 CDS YP_005688996.1 385779831 12422280 complement(2981039..2982538) 1 NC_017304.1 PFAM: Heavy metal transport/detoxification protein; KEGG: cce:Ccel_0745 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 2982538 12422280 Clo1313_2541 Clostridium thermocellum DSM 1313 heavy metal transport/detoxification protein YP_005688996.1 2981039 R 637887 CDS YP_005688997.1 385779832 12422281 complement(2982592..2983083) 1 NC_017304.1 KEGG: cce:Ccel_1716 hypothetical protein; hypothetical protein 2983083 12422281 Clo1313_2542 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688997.1 2982592 R 637887 CDS YP_005688998.1 385779833 12422282 complement(2983304..2983897) 1 NC_017304.1 KEGG: tjr:TherJR_1966 protein of unknown function DUF1113; manually curated; PFAM: protein of unknown function DUF1113; hypothetical protein 2983897 12422282 Clo1313_2543 Clostridium thermocellum DSM 1313 hypothetical protein YP_005688998.1 2983304 R 637887 CDS YP_005688999.1 385779834 12422288 complement(2985035..2985925) 1 NC_017304.1 PFAM: Hsp33 protein; KEGG: cce:Ccel_2900 HSP33 protein; Hsp33 protein 2985925 12422288 Clo1313_2544 Clostridium thermocellum DSM 1313 Hsp33 protein YP_005688999.1 2985035 R 637887 CDS YP_005689000.1 385779835 12422289 complement(2986131..2986331) 1 NC_017304.1 KEGG: cce:Ccel_2901 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 2986331 12422289 Clo1313_2545 Clostridium thermocellum DSM 1313 cold-shock protein YP_005689000.1 2986131 R 637887 CDS YP_005689001.1 385779836 12422290 complement(2986476..2986796) 1 NC_017304.1 KEGG: apv:Apar_0739 methylated-DNA/protein-cysteinemethyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 2986796 12422290 Clo1313_2546 Clostridium thermocellum DSM 1313 methylated-DNA--protein-cysteine methyltransferase YP_005689001.1 2986476 R 637887 CDS YP_005689002.1 385779837 12422291 complement(2986800..2987534) 1 NC_017304.1 KEGG: cce:Ccel_2902 methyltransferase type 12; manually curated; PFAM: Methyltransferase type 11; type 11 methyltransferase 2987534 12422291 Clo1313_2547 Clostridium thermocellum DSM 1313 type 11 methyltransferase YP_005689002.1 2986800 R 637887 CDS YP_005689003.1 385779838 12422292 complement(2987713..2987886) 1 NC_017304.1 KEGG: cce:Ccel_2903 small acid-soluble spore protein beta; beta type small acid-soluble spore protein 2987886 12422292 Clo1313_2548 Clostridium thermocellum DSM 1313 beta type small acid-soluble spore protein YP_005689003.1 2987713 R 637887 CDS YP_005689004.1 385779839 12422293 complement(2988003..2989292) 1 NC_017304.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: cce:Ccel_2904 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 2989292 12422293 Clo1313_2549 Clostridium thermocellum DSM 1313 carboxyl-terminal protease YP_005689004.1 2988003 R 637887 CDS YP_005689005.1 385779840 12422294 complement(2989507..2990634) 1 NC_017304.1 PFAM: Peptidase M23; KEGG: cce:Ccel_2905 peptidase M23; peptidase M23 2990634 12422294 Clo1313_2550 Clostridium thermocellum DSM 1313 peptidase M23 YP_005689005.1 2989507 R 637887 CDS YP_005689006.1 385779841 12422295 complement(2990702..2991586) 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: cce:Ccel_2906 protein of unknown function DUF214; hypothetical protein 2991586 12422295 Clo1313_2551 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689006.1 2990702 R 637887 CDS YP_005689007.1 385779842 12422296 complement(2991555..2992262) 1 NC_017304.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: cce:Ccel_2907 cell division ATP-binding protein FtsE; SMART: AAA ATPase; cell division ATP-binding protein FtsE 2992262 12422296 Clo1313_2552 Clostridium thermocellum DSM 1313 cell division ATP-binding protein FtsE YP_005689007.1 2991555 R 637887 CDS YP_005689008.1 385779843 12422297 complement(2992437..2993522) 1 NC_017304.1 KEGG: cce:Ccel_2908 transcriptional regulator, CdaR; transcriptional regulator CdaR 2993522 12422297 Clo1313_2553 Clostridium thermocellum DSM 1313 transcriptional regulator CdaR YP_005689008.1 2992437 R 637887 CDS YP_005689009.1 385779844 12422298 complement(2993715..2994827) 1 NC_017304.1 manually curated; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: cce:Ccel_2909 ABC transporter related; SMART: AAA ATPase; ABC transporter 2994827 12422298 Clo1313_2554 Clostridium thermocellum DSM 1313 ABC transporter YP_005689009.1 2993715 R 637887 CDS YP_005689010.1 385779845 12422299 2995209..2996249 1 NC_017304.1 SMART: Semialdehyde dehydrogenase NAD - binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: tjr:TherJR_0346 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase 2996249 12422299 Clo1313_2555 Clostridium thermocellum DSM 1313 N-acetyl-gamma-glutamyl-phosphate reductase YP_005689010.1 2995209 D 637887 CDS YP_005689011.1 385779846 12422300 2996314..2997228 1 NC_017304.1 TIGRFAM: acetylglutamate kinase; KEGG: cce:Ccel_2911 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 2997228 12422300 Clo1313_2556 Clostridium thermocellum DSM 1313 acetylglutamate kinase YP_005689011.1 2996314 D 637887 CDS YP_005689012.1 385779847 12422301 2997411..2998073 1 NC_017304.1 PFAM: type IV pilus assembly PilZ; KEGG: sbi:SORBI_06g005650 hypothetical protein; type IV pilus assembly PilZ 2998073 12422301 Clo1313_2557 Clostridium thermocellum DSM 1313 type IV pilus assembly PilZ YP_005689012.1 2997411 D 637887 CDS YP_005689013.1 385779848 12422302 2998477..2999679 1 NC_017304.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: cce:Ccel_2912 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 2999679 12422302 Clo1313_2558 Clostridium thermocellum DSM 1313 acetylornithine and succinylornithine aminotransferase YP_005689013.1 2998477 D 637887 CDS YP_005689014.1 385779849 12422303 2999899..3000963 1 NC_017304.1 KEGG: cce:Ccel_2913 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; carbamoyl-phosphate synthase small subunit 3000963 12422303 Clo1313_2559 Clostridium thermocellum DSM 1313 carbamoyl-phosphate synthase small subunit YP_005689014.1 2999899 D 637887 CDS YP_005689015.1 385779850 12422304 3000997..3004200 1 NC_017304.1 KEGG: cce:Ccel_2914 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 3004200 12422304 Clo1313_2560 Clostridium thermocellum DSM 1313 carbamoyl-phosphate synthase large subunit YP_005689015.1 3000997 D 637887 CDS YP_005689016.1 385779851 12422305 3004235..3005158 1 NC_017304.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: cce:Ccel_2915 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 3005158 12422305 Clo1313_2561 Clostridium thermocellum DSM 1313 ornithine carbamoyltransferase YP_005689016.1 3004235 D 637887 CDS YP_005689017.1 385779852 12422306 3005171..3005647 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cce:Ccel_2916 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3005647 12422306 Clo1313_2562 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005689017.1 3005171 D 637887 CDS YP_005689018.1 385779853 12422307 complement(3006066..3007013) 1 NC_017304.1 PFAM: transposase IS4 family protein; KEGG: llo:LLO_1884 transposase (DDE domain); transposase IS4 family protein 3007013 12422307 Clo1313_2563 Clostridium thermocellum DSM 1313 transposase IS4 family protein YP_005689018.1 3006066 R 637887 CDS YP_005689019.1 385779854 12422308 complement(3007588..3009801) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: ecw:EcE24377A_1450 hypothetical protein; Dockerin type 1 3009801 12422308 Clo1313_2564 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005689019.1 3007588 R 637887 CDS YP_005689020.1 385779855 12422309 complement(3010374..3010763) 1 NC_017304.1 KEGG: dhd:Dhaf_0970 hypothetical protein; hypothetical protein 3010763 12422309 Clo1313_2565 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689020.1 3010374 R 637887 CDS YP_005689021.1 385779856 12422311 complement(3011744..3012187) 1 NC_017304.1 KEGG: dhd:Dhaf_0962 cell division membrane protein-like protein; cell division membrane protein-like protein 3012187 12422311 Clo1313_2567 Clostridium thermocellum DSM 1313 cell division membrane protein-like protein YP_005689021.1 3011744 R 637887 CDS YP_005689022.1 385779857 12422312 complement(3012174..3012521) 1 NC_017304.1 KEGG: dsy:DSY4371 hypothetical protein; manually curated; PFAM: transcriptional regulator PadR family protein; PadR-like family transcriptional regulator 3012521 12422312 Clo1313_2568 Clostridium thermocellum DSM 1313 PadR-like family transcriptional regulator YP_005689022.1 3012174 R 637887 CDS YP_005689023.1 385779858 12422313 complement(3012664..3013425) 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: cbe:Cbei_1777 metallophosphoesterase; metallophosphoesterase 3013425 12422313 Clo1313_2569 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005689023.1 3012664 R 637887 CDS YP_005689024.1 385779859 12422314 complement(3013522..3013848) 1 NC_017304.1 KEGG: bcb:BCB4264_A2973 hypothetical protein; hypothetical protein 3013848 12422314 Clo1313_2570 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689024.1 3013522 R 637887 CDS YP_005689025.1 385779860 12422316 complement(3014512..3015381) 1 NC_017304.1 KEGG: shi:Shel_05720 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; serine-type D-Ala-D-Ala carboxypeptidase 3015381 12422316 Clo1313_2572 Clostridium thermocellum DSM 1313 serine-type D-Ala-D-Ala carboxypeptidase YP_005689025.1 3014512 R 637887 CDS YP_005689026.1 385779861 12422318 3016481..3017704 1 NC_017304.1 KEGG: tpd:Teth39_2032 transposase, mutator type; manually curated; PFAM: transposase mutator type; transposase mutator type 3017704 12422318 Clo1313_2574 Clostridium thermocellum DSM 1313 transposase mutator type YP_005689026.1 3016481 D 637887 CDS YP_005689027.1 385779862 12422319 complement(3018024..3018899) 1 NC_017304.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pto:PTO0418 threonine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 3018899 12422319 Clo1313_2575 Clostridium thermocellum DSM 1313 pyridoxal-5'-phosphate-dependent protein subunit beta YP_005689027.1 3018024 R 637887 CDS YP_005689028.1 385779863 12422320 complement(3018948..3019685) 1 NC_017304.1 KEGG: cpy:Cphy_0405 polysaccharide deacetylase; manually curated; PFAM: polysaccharide deacetylase; polysaccharide deacetylase 3019685 12422320 Clo1313_2576 Clostridium thermocellum DSM 1313 polysaccharide deacetylase YP_005689028.1 3018948 R 637887 CDS YP_005689029.1 385779864 12422321 complement(3019741..3025242) 1 NC_017304.1 KEGG: hau:Haur_3129 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; major facilitator superfamily MFS_1; amino acid adenylation protein 3025242 12422321 Clo1313_2577 Clostridium thermocellum DSM 1313 amino acid adenylation protein YP_005689029.1 3019741 R 637887 CDS YP_005689030.1 385779865 12422322 complement(3025373..3026605) 1 NC_017304.1 PFAM: glycosyl transferase family 28; KEGG: ote:Oter_1867 glycosyl transferase family protein; glycosyl transferase family protein 3026605 12422322 Clo1313_2578 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005689030.1 3025373 R 637887 CDS YP_005689031.1 385779866 12422323 complement(3026636..3027847) 1 NC_017304.1 PFAM: glycosyl transferase family 28; KEGG: mch:Mchl_5544 glycosyl transferase family 28; glycosyl transferase family protein 3027847 12422323 Clo1313_2579 Clostridium thermocellum DSM 1313 glycosyl transferase family protein YP_005689031.1 3026636 R 637887 CDS YP_005689032.1 385779867 12422324 complement(3027953..3029830) 1 NC_017304.1 manually curated; TIGRFAM: amino acid adenylation domain protein; KEGG: cyc:PCC7424_5756 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; amino acid adenylation protein 3029830 12422324 Clo1313_2580 Clostridium thermocellum DSM 1313 amino acid adenylation protein YP_005689032.1 3027953 R 637887 CDS YP_005689033.1 385779868 12422325 complement(3030257..3033145) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: cce:Ccel_2335 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 3033145 12422325 Clo1313_2581 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005689033.1 3030257 R 637887 CDS YP_005689034.1 385779869 12422326 complement(3033138..3034610) 1 NC_017304.1 KEGG: cce:Ccel_2334 copper amine oxidase domain protein; manually curated; PFAM: copper amine oxidase-like domain-containing protein; copper amine oxidase-like domain-containing protein 3034610 12422326 Clo1313_2582 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005689034.1 3033138 R 637887 CDS YP_005689035.1 385779870 12422327 complement(3034639..3035880) 1 NC_017304.1 KEGG: cce:Ccel_2336 hypothetical protein; hypothetical protein 3035880 12422327 Clo1313_2583 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689035.1 3034639 R 637887 CDS YP_005689036.1 385779871 12422328 complement(3036223..3040095) 1 NC_017304.1 KEGG: cce:Ccel_1656 carbohydrate binding family 6; PFAM: Carbohydrate binding family 6; S-layer domain-containing protein; SMART: cellulose binding type IV; carbohydrate binding family protein 3040095 12422328 Clo1313_2584 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005689036.1 3036223 R 637887 CDS YP_005689037.1 385779872 12422329 complement(3040450..3040926) 1 NC_017304.1 PFAM: transposase IS200-family protein; KEGG: dhd:Dhaf_3832 transposase IS200-family protein; transposase IS200-family protein 3040926 12422329 Clo1313_2585 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005689037.1 3040450 R 637887 CDS YP_005689038.1 385779873 12422330 complement(3041147..3042754) 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: dsy:DSY1185 hypothetical protein; copper amine oxidase-like domain-containing protein 3042754 12422330 Clo1313_2586 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005689038.1 3041147 R 637887 CDS YP_005689039.1 385779874 12422331 complement(3042972..3043769) 1 NC_017304.1 KEGG: hor:Hore_08350 hypothetical protein; hypothetical protein 3043769 12422331 Clo1313_2587 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689039.1 3042972 R 637887 CDS YP_005689040.1 385779875 12422332 complement(3043874..3045154) 1 NC_017304.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: dae:Dtox_2626 TPR repeat-containing protein; hypothetical protein 3045154 12422332 Clo1313_2588 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689040.1 3043874 R 637887 CDS YP_005689041.1 385779876 12422333 complement(3045256..3046647) 1 NC_017304.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: dae:Dtox_2624 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 3046647 12422333 Clo1313_2589 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005689041.1 3045256 R 637887 CDS YP_005689042.1 385779877 12422334 complement(3046649..3047335) 1 NC_017304.1 KEGG: dae:Dtox_2625 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3047335 12422334 Clo1313_2590 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005689042.1 3046649 R 637887 CDS YP_005689043.1 385779878 12422335 complement(3048789..3051506) 1 NC_017304.1 KEGG: cce:Ccel_0294 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; P-type HAD superfamily ATPase 3051506 12422335 Clo1313_2591 Clostridium thermocellum DSM 1313 P-type HAD superfamily ATPase YP_005689043.1 3048789 R 637887 CDS YP_005689044.1 385779879 12422336 complement(3051659..3053119) 1 NC_017304.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ate:Athe_2050 Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase major region 3053119 12422336 Clo1313_2592 Clostridium thermocellum DSM 1313 Orn/Lys/Arg decarboxylase major region YP_005689044.1 3051659 R 637887 CDS YP_005689045.1 385779880 12422337 complement(3053252..3053950) 1 NC_017304.1 PFAM: MgtC/SapB transporter; amino acid-binding ACT domain protein; KEGG: cce:Ccel_0293 MgtC/SapB transporter; MgtC/SapB transporter 3053950 12422337 Clo1313_2593 Clostridium thermocellum DSM 1313 MgtC/SapB transporter YP_005689045.1 3053252 R 637887 CDS YP_005689046.1 385779881 12422338 complement(3054257..3054955) 1 NC_017304.1 KEGG: cce:Ccel_0292 stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R; stage II sporulation protein R 3054955 12422338 Clo1313_2594 Clostridium thermocellum DSM 1313 stage II sporulation protein R YP_005689046.1 3054257 R 637887 CDS YP_005689047.1 385779882 12422339 3055278..3055622 1 NC_017304.1 PFAM: transcriptional regulator PadR family protein; KEGG: ckr:CKR_1526 hypothetical protein; PadR-like family transcriptional regulator 3055622 12422339 Clo1313_2595 Clostridium thermocellum DSM 1313 PadR-like family transcriptional regulator YP_005689047.1 3055278 D 637887 CDS YP_005689048.1 385779883 12422340 3055609..3056577 1 NC_017304.1 KEGG: ckr:CKR_1525 hypothetical protein; hypothetical protein 3056577 12422340 Clo1313_2596 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689048.1 3055609 D 637887 CDS YP_005689049.1 385779884 12422341 complement(3056697..3058325) 1 NC_017304.1 TIGRFAM: CTP synthase; KEGG: csc:Csac_2561 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 3058325 12422341 Clo1313_2597 Clostridium thermocellum DSM 1313 CTP synthase YP_005689049.1 3056697 R 637887 CDS YP_005689050.1 385779885 12422343 complement(3060574..3061191) 1 NC_017304.1 KEGG: pcu:pc1361 hypothetical protein; hypothetical protein 3061191 12422343 Clo1313_2599 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689050.1 3060574 R 637887 CDS YP_005689051.1 385779886 12422344 complement(3061379..3063031) 1 NC_017304.1 SMART: Hedgehog/intein hint domain protein; KEGG: nme:NMB0655 hypothetical protein; Hedgehog/intein hint domain-containing protein 3063031 12422344 Clo1313_2600 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005689051.1 3061379 R 637887 CDS YP_005689052.1 385779887 12422345 complement(3063414..3064931) 1 NC_017304.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; Peptidoglycan-binding domain 1 protein; KEGG: tjr:TherJR_0020 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 3064931 12422345 Clo1313_2601 Clostridium thermocellum DSM 1313 carboxyl-terminal protease YP_005689052.1 3063414 R 637887 CDS YP_005689053.1 385779888 12422346 complement(3065005..3066570) 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0289 S-layer domain protein; S-layer protein 3066570 12422346 Clo1313_2602 Clostridium thermocellum DSM 1313 S-layer protein YP_005689053.1 3065005 R 637887 CDS YP_005689054.1 385779889 12422347 complement(3066598..3069603) 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: cce:Ccel_0288 hypothetical protein; S-layer protein 3069603 12422347 Clo1313_2603 Clostridium thermocellum DSM 1313 S-layer protein YP_005689054.1 3066598 R 637887 CDS YP_005689055.1 385779890 12422348 complement(3069805..3070440) 1 NC_017304.1 manually curated; KEGG: tpd:Teth39_0191 Zn-dependent hydrolase of the beta-lactamase fold-like protein; Zn-dependent hydrolase 3070440 12422348 Clo1313_2604 Clostridium thermocellum DSM 1313 Zn-dependent hydrolase YP_005689055.1 3069805 R 637887 CDS YP_005689056.1 385779891 12422349 complement(3070528..3071205) 1 NC_017304.1 KEGG: ckr:CKR_0665 hypothetical protein; manually curated; PFAM: Abortive infection protein; abortive infection protein 3071205 12422349 Clo1313_2605 Clostridium thermocellum DSM 1313 abortive infection protein YP_005689056.1 3070528 R 637887 CDS YP_005689057.1 385779892 12422350 complement(3071387..3073081) 1 NC_017304.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: cce:Ccel_0285 arginyl-tRNA synthetase; arginyl-tRNA synthetase 3073081 12422350 Clo1313_2606 Clostridium thermocellum DSM 1313 arginyl-tRNA synthetase YP_005689057.1 3071387 R 637887 CDS YP_005689058.1 385779893 12422351 complement(3073044..3073511) 1 NC_017304.1 PFAM: Domain of unknown function DUF1934; KEGG: cce:Ccel_0284 hypothetical protein; hypothetical protein 3073511 12422351 Clo1313_2607 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689058.1 3073044 R 637887 CDS YP_005689059.1 385779894 12422352 complement(3073570..3074376) 1 NC_017304.1 TIGRFAM: glutamate racemase; KEGG: csc:Csac_1373 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 3074376 12422352 Clo1313_2608 Clostridium thermocellum DSM 1313 glutamate racemase YP_005689059.1 3073570 R 637887 CDS YP_005689060.1 385779895 12422353 complement(3074441..3075571) 1 NC_017304.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: cce:Ccel_0283 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 3075571 12422353 Clo1313_2609 Clostridium thermocellum DSM 1313 D-alanine--D-alanine ligase YP_005689060.1 3074441 R 637887 CDS YP_005689061.1 385779896 12422354 complement(3076096..3077430) 1 NC_017304.1 TIGRFAM: magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; KEGG: cno:NT01CX_1586 magnesium transporter; SMART: CBS domain containing protein; magnesium transporter 3077430 12422354 Clo1313_2610 Clostridium thermocellum DSM 1313 magnesium transporter YP_005689061.1 3076096 R 637887 CDS YP_005689062.1 385779897 12422355 complement(3077402..3077539) 1 NC_017304.1 hypothetical protein 3077539 12422355 Clo1313_2611 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689062.1 3077402 R 637887 CDS YP_005689063.1 385779898 12422356 complement(3077603..3078343) 1 NC_017304.1 PFAM: RDD domain containing protein; KEGG: emi:Emin_0170 RDD domain-containing protein; RDD domain-containing protein 3078343 12422356 Clo1313_2612 Clostridium thermocellum DSM 1313 RDD domain-containing protein YP_005689063.1 3077603 R 637887 CDS YP_005689064.1 385779899 12422357 3078525..3078740 1 NC_017304.1 KEGG: cce:Ccel_0363 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 3078740 12422357 Clo1313_2613 Clostridium thermocellum DSM 1313 FmdB family regulatory protein YP_005689064.1 3078525 D 637887 CDS YP_005689065.1 385779900 12422358 complement(3078779..3079678) 1 NC_017304.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: cce:Ccel_0362 cytochrome b5; Lipoprotein LpqB, GerMN domain 3079678 12422358 Clo1313_2614 Clostridium thermocellum DSM 1313 Lipoprotein LpqB, GerMN domain YP_005689065.1 3078779 R 637887 CDS YP_005689066.1 385779901 12422359 complement(3079769..3080431) 1 NC_017304.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: ton:TON_1608 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 3080431 12422359 Clo1313_2615 Clostridium thermocellum DSM 1313 deoxyribose-phosphate aldolase YP_005689066.1 3079769 R 637887 CDS YP_005689067.1 385779902 12422360 complement(3080747..3081295) 1 NC_017304.1 PFAM: protein of unknown function DUF458; KEGG: bpu:BPUM_1307 hypothetical protein; hypothetical protein 3081295 12422360 Clo1313_2616 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689067.1 3080747 R 637887 CDS YP_005689068.1 385779903 12422361 complement(3081566..3082459) 1 NC_017304.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cce:Ccel_0360 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3082459 12422361 Clo1313_2617 Clostridium thermocellum DSM 1313 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005689068.1 3081566 R 637887 CDS YP_005689069.1 385779904 12422362 complement(3082513..3083796) 1 NC_017304.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain-containing protein; KEGG: chy:CHY_0560 thioredoxin/thioredoxin-disulfide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3083796 12422362 Clo1313_2618 Clostridium thermocellum DSM 1313 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_005689069.1 3082513 R 637887 CDS YP_005689070.1 385779905 12422363 complement(3083833..3084429) 1 NC_017304.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cce:Ccel_1661 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 3084429 12422363 Clo1313_2619 Clostridium thermocellum DSM 1313 alkyl hydroperoxide reductase YP_005689070.1 3083833 R 637887 CDS YP_005689071.1 385779906 12422364 complement(3084491..3085159) 1 NC_017304.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cce:Ccel_1660 cytochrome c biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane region 3085159 12422364 Clo1313_2620 Clostridium thermocellum DSM 1313 cytochrome c biogenesis protein transmembrane region YP_005689071.1 3084491 R 637887 CDS YP_005689072.1 385779907 12422365 3085803..3086126 1 NC_017304.1 KEGG: cce:Ccel_0358 hypothetical protein; hypothetical protein 3086126 12422365 Clo1313_2621 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689072.1 3085803 D 637887 CDS YP_005689073.1 385779908 12422366 3086201..3086662 1 NC_017304.1 KEGG: cce:Ccel_0357 hypothetical protein; hypothetical protein 3086662 12422366 Clo1313_2622 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689073.1 3086201 D 637887 CDS YP_005689074.1 385779909 12422367 3086676..3087050 1 NC_017304.1 KEGG: cce:Ccel_0356 hypothetical protein; hypothetical protein 3087050 12422367 Clo1313_2623 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689074.1 3086676 D 637887 CDS YP_005689075.1 385779910 12422368 3087340..3088044 1 NC_017304.1 KEGG: csc:Csac_1743 cell wall hydrolase, SleB; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein; spore cortex-lytic protein 3088044 12422368 Clo1313_2624 Clostridium thermocellum DSM 1313 spore cortex-lytic protein YP_005689075.1 3087340 D 637887 CDS YP_005689076.1 385779911 12422369 complement(3088099..3088962) 1 NC_017304.1 KEGG: cce:Ccel_0355 hypothetical protein; hypothetical protein 3088962 12422369 Clo1313_2625 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689076.1 3088099 R 637887 CDS YP_005689077.1 385779912 12422370 complement(3089047..3091203) 1 NC_017304.1 KEGG: cce:Ccel_0354 RNA binding S1 domain protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein 3091203 12422370 Clo1313_2626 Clostridium thermocellum DSM 1313 Tex-like protein YP_005689077.1 3089047 R 637887 CDS YP_005689078.1 385779913 12422371 complement(3091484..3092416) 1 NC_017304.1 KEGG: hor:Hore_22720 tagatose-6-phosphate kinase, phosphofructokinase I; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 3092416 12422371 Clo1313_2627 Clostridium thermocellum DSM 1313 1-phosphofructokinase YP_005689078.1 3091484 R 637887 CDS YP_005689079.1 385779914 12422372 complement(3092453..3093793) 1 NC_017304.1 PFAM: extracellular solute-binding protein family 1; KEGG: mrb:Mrub_0284 extracellular solute-binding protein family 1; extracellular solute-binding protein 3093793 12422372 Clo1313_2628 Clostridium thermocellum DSM 1313 extracellular solute-binding protein YP_005689079.1 3092453 R 637887 CDS YP_005689080.1 385779915 12422373 complement(3094055..3094252) 1 NC_017304.1 KEGG: apo:Arcpr_1461 dihydroxy-acid dehydratase; hypothetical protein 3094252 12422373 Clo1313_2629 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689080.1 3094055 R 637887 CDS YP_005689081.1 385779916 12422374 complement(3094337..3095302) 1 NC_017304.1 KEGG: cce:Ccel_0352 putative UV damage endonuclease; TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE; UV-endonuclease UvdE 3095302 12422374 Clo1313_2630 Clostridium thermocellum DSM 1313 UV-endonuclease UvdE YP_005689081.1 3094337 R 637887 CDS YP_005689082.1 385779917 12422375 complement(3095385..3096119) 1 NC_017304.1 PFAM: Methyltransferase type 11; KEGG: cce:Ccel_1149 methyltransferase type 11; type 11 methyltransferase 3096119 12422375 Clo1313_2631 Clostridium thermocellum DSM 1313 type 11 methyltransferase YP_005689082.1 3095385 R 637887 CDS YP_005689083.1 385779918 12422376 complement(3096487..3097569) 1 NC_017304.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: hmo:HM1_1685 peptidoglycan binding domain 1, putative; peptidoglycan-binding domain-containing protein 3097569 12422376 Clo1313_2632 Clostridium thermocellum DSM 1313 peptidoglycan-binding domain-containing protein YP_005689083.1 3096487 R 637887 CDS YP_005689084.1 385779919 12422377 3097986..3100436 1 NC_017304.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: cce:Ccel_0348 nucleotidyl transferase; nucleotidyltransferase 3100436 12422377 Clo1313_2633 Clostridium thermocellum DSM 1313 nucleotidyltransferase YP_005689084.1 3097986 D 637887 CDS YP_005689085.1 385779920 12422378 3100473..3101435 1 NC_017304.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: cce:Ccel_0347 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 3101435 12422378 Clo1313_2634 Clostridium thermocellum DSM 1313 RluA family pseudouridine synthase YP_005689085.1 3100473 D 637887 CDS YP_005689086.1 385779921 12422379 complement(3101534..3104047) 1 NC_017304.1 KEGG: cce:Ccel_1232 carbohydrate binding family 6; PFAM: glycoside hydrolase family 10; Carbohydrate binding family 6; esterase; Dockerin type 1; SMART: glycoside hydrolase family 10; cellulose binding type IV; glycoside hydrolase 3104047 12422379 Clo1313_2635 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689086.1 3101534 R 637887 CDS YP_005689087.1 385779922 12422381 complement(3104643..3106172) 1 NC_017304.1 KEGG: gwc:GWCH70_0448 alkyl hydroperoxide reductase, F subunit; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; alkyl hydroperoxide reductase 3106172 12422381 Clo1313_2637 Clostridium thermocellum DSM 1313 alkyl hydroperoxide reductase YP_005689087.1 3104643 R 637887 CDS YP_005689088.1 385779923 12422382 complement(3106186..3106749) 1 NC_017304.1 TIGRFAM: peroxiredoxin; KEGG: cbe:Cbei_2135 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; peroxiredoxin 3106749 12422382 Clo1313_2638 Clostridium thermocellum DSM 1313 peroxiredoxin YP_005689088.1 3106186 R 637887 CDS YP_005689089.1 385779924 12422383 complement(3106959..3107099) 1 NC_017304.1 KEGG: smm:Smp_045610 rho GDP-dissociation inhibitor-related; hypothetical protein 3107099 12422383 Clo1313_2639 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689089.1 3106959 R 637887 CDS YP_005689090.1 385779925 12422384 complement(3107135..3107461) 1 NC_017304.1 KEGG: esi:Exig_2157 succinate dehydrogenase flavoprotein subunit; hypothetical protein 3107461 12422384 Clo1313_2640 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689090.1 3107135 R 637887 CDS YP_005689091.1 385779926 12422385 complement(3107476..3109212) 1 NC_017304.1 KEGG: oih:OB1316 hypothetical protein; hypothetical protein 3109212 12422385 Clo1313_2641 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689091.1 3107476 R 637887 CDS YP_005689092.1 385779927 12422386 complement(3109215..3112415) 1 NC_017304.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: cac:CA_C0039 DNA segregation ATP-ase FtsK/SpoIIIE; cell division protein FtsK 3112415 12422386 Clo1313_2642 Clostridium thermocellum DSM 1313 cell division protein FtsK YP_005689092.1 3109215 R 637887 CDS YP_005689093.1 385779928 12422387 complement(3112439..3113818) 1 NC_017304.1 KEGG: cno:NT01CX_0211 putative S-layer protein (peptidoglycan anchored); hypothetical protein 3113818 12422387 Clo1313_2643 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689093.1 3112439 R 637887 CDS YP_005689094.1 385779929 12422388 complement(3113934..3114239) 1 NC_017304.1 KEGG: isc:IscW_ISCW012825 hypothetical protein; hypothetical protein 3114239 12422388 Clo1313_2644 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689094.1 3113934 R 637887 CDS YP_005689095.1 385779930 12422389 complement(3114257..3114586) 1 NC_017304.1 KEGG: pic:PICST_29284 hypothetical protein; hypothetical protein 3114586 12422389 Clo1313_2645 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689095.1 3114257 R 637887 CDS YP_005689096.1 385779931 12422390 complement(3114611..3114931) 1 NC_017304.1 KEGG: mch:Mchl_4932 apolipoprotein A1/A4/E; hypothetical protein 3114931 12422390 Clo1313_2646 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689096.1 3114611 R 637887 CDS YP_005689097.1 385779932 12422391 complement(3114928..3116451) 1 NC_017304.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ptm:GSPATT00039334001 hypothetical protein; hypothetical protein 3116451 12422391 Clo1313_2647 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689097.1 3114928 R 637887 CDS YP_005689098.1 385779933 12422392 complement(3116613..3117176) 1 NC_017304.1 KEGG: bcy:Bcer98_0786 cell wall anchor domain-containing protein; hypothetical protein 3117176 12422392 Clo1313_2648 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689098.1 3116613 R 637887 CDS YP_005689099.1 385779934 12422393 complement(3117694..3118032) 1 NC_017304.1 KEGG: gyc:GYMC61_3122 hypothetical protein; hypothetical protein 3118032 12422393 Clo1313_2649 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689099.1 3117694 R 637887 CDS YP_005689100.1 385779935 12422394 complement(3118091..3118336) 1 NC_017304.1 KEGG: dmo:Dmoj_GI24505 GI24505 gene product from transcript GI24505-RA; hypothetical protein 3118336 12422394 Clo1313_2650 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689100.1 3118091 R 637887 CDS YP_005689101.1 385779936 12422395 complement(3118317..3119669) 1 NC_017304.1 SMART: Hedgehog/intein hint domain protein; KEGG: ate:Athe_2571 transglutaminase domain protein; Hedgehog/intein hint domain-containing protein 3119669 12422395 Clo1313_2651 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005689101.1 3118317 R 637887 CDS YP_005689102.1 385779937 12422397 complement(3120996..3121133) 1 NC_017304.1 manually curated; KEGG: cbb:CLD_2459 hypothetical protein; hypothetical protein 3121133 12422397 Clo1313_2653 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689102.1 3120996 R 637887 CDS YP_005689103.1 385779938 12422398 complement(3121126..3121515) 1 NC_017304.1 KEGG: ssl:SS1G_06335 hypothetical protein; hypothetical protein 3121515 12422398 Clo1313_2654 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689103.1 3121126 R 637887 CDS YP_005689104.1 385779939 12422399 complement(3121683..3122024) 1 NC_017304.1 KEGG: ptm:GSPATT00003973001 hypothetical protein; hypothetical protein 3122024 12422399 Clo1313_2655 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689104.1 3121683 R 637887 CDS YP_005689105.1 385779940 12422401 complement(3123818..3124132) 1 NC_017304.1 KEGG: spo:SPBC29A10.04 mitotic cohesin complex subunit Psm1 (PMID 11069892); hypothetical protein 3124132 12422401 Clo1313_2657 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689105.1 3123818 R 637887 CDS YP_005689106.1 385779941 12422402 complement(3124143..3124439) 1 NC_017304.1 manually curated; KEGG: rcp:RCAP_rcc02587 hypothetical protein; hypothetical protein 3124439 12422402 Clo1313_2658 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689106.1 3124143 R 637887 CDS YP_005689107.1 385779942 12422403 complement(3124568..3125827) 1 NC_017304.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: bcx:BCA_2283 transposase, IS110 family, OrfB; transposase IS116/IS110/IS902 family protein 3125827 12422403 Clo1313_2659 Clostridium thermocellum DSM 1313 transposase IS116/IS110/IS902 family protein YP_005689107.1 3124568 R 637887 CDS YP_005689108.1 385779943 12422404 complement(3126248..3126799) 1 NC_017304.1 KEGG: mmz:MmarC7_1490 resolvase domain-containing protein; hypothetical protein 3126799 12422404 Clo1313_2660 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689108.1 3126248 R 637887 CDS YP_005689109.1 385779944 12422405 complement(3127067..3127417) 1 NC_017304.1 manually curated; KEGG: ecw:EcE24377A_0425 exonuclease subunit SbcD; hypothetical protein 3127417 12422405 Clo1313_2661 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689109.1 3127067 R 637887 CDS YP_005689110.1 385779945 12422407 join(3127621..3127896,3127898..3128773) 1 NC_017304.1 KEGG: cce:Ccel_1666 transposase IS3/IS911 family protein; manually curated; PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3128773 12422407 Clo1313_2663 Clostridium thermocellum DSM 1313 transposase IS3/IS911 family protein YP_005689110.1 3127621 D 637887 CDS YP_005689111.1 385779946 12422408 complement(3129745..3130692) 1 NC_017304.1 PFAM: transposase IS4 family protein; KEGG: llo:LLO_1884 transposase (DDE domain); transposase IS4 family protein 3130692 12422408 Clo1313_2664 Clostridium thermocellum DSM 1313 transposase IS4 family protein YP_005689111.1 3129745 R 637887 CDS YP_005689112.1 385779947 12422409 complement(3130960..3131331) 1 NC_017304.1 KEGG: cbe:Cbei_3223 hypothetical protein; hypothetical protein 3131331 12422409 Clo1313_2665 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689112.1 3130960 R 637887 CDS YP_005689113.1 385779948 12422410 complement(3131344..3133098) 1 NC_017304.1 SMART: Hedgehog/intein hint domain protein; KEGG: rca:Rcas_1719 hypothetical protein; Hedgehog/intein hint domain-containing protein 3133098 12422410 Clo1313_2666 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005689113.1 3131344 R 637887 CDS YP_005689114.1 385779949 12422411 complement(3133546..3134352) 1 NC_017304.1 PFAM: Bifunctional DNA primase/polymerase ; Primase 1; KEGG: adg:Adeg_2001 bifunctional DNA primase/polymerase; bifunctional DNA primase/polymerase 3134352 12422411 Clo1313_2667 Clostridium thermocellum DSM 1313 bifunctional DNA primase/polymerase YP_005689114.1 3133546 R 637887 CDS YP_005689115.1 385779950 12422413 complement(3134608..3134997) 1 NC_017304.1 KEGG: ote:Oter_1901 RND family efflux transporter MFP subunit; hypothetical protein 3134997 12422413 Clo1313_2669 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689115.1 3134608 R 637887 CDS YP_005689116.1 385779951 12422414 complement(3135192..3135470) 1 NC_017304.1 KEGG: ssl:SS1G_08969 hypothetical protein; hypothetical protein 3135470 12422414 Clo1313_2670 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689116.1 3135192 R 637887 CDS YP_005689117.1 385779952 12422415 complement(3135484..3137157) 1 NC_017304.1 KEGG: str:Sterm_0439 Hedgehog/intein hint domain protein; manually curated; SMART: Hedgehog/intein hint domain protein; Hedgehog/intein hint domain-containing protein 3137157 12422415 Clo1313_2671 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005689117.1 3135484 R 637887 CDS YP_005689118.1 385779953 12422416 complement(3137300..3137647) 1 NC_017304.1 KEGG: lcb:LCABL_12630 cell surface protein; hypothetical protein 3137647 12422416 Clo1313_2672 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689118.1 3137300 R 637887 CDS YP_005689119.1 385779954 12422419 complement(3139629..3140099) 1 NC_017304.1 KEGG: str:Sterm_0453 hypothetical protein; hypothetical protein 3140099 12422419 Clo1313_2675 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689119.1 3139629 R 637887 CDS YP_005689120.1 385779955 12422421 complement(3140848..3142086) 1 NC_017304.1 PFAM: Domain of unknown function DUF1910; Domain of unknown function DUF1911; KEGG: bcg:BCG9842_B2211 hypothetical protein; hypothetical protein 3142086 12422421 Clo1313_2677 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689120.1 3140848 R 637887 CDS YP_005689121.1 385779956 12422422 complement(3142110..3143957) 1 NC_017304.1 SMART: Hedgehog/intein hint domain protein; KEGG: bcg:BCG9842_B2210 putative cytoplasmic protein; Hedgehog/intein hint domain-containing protein 3143957 12422422 Clo1313_2678 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005689121.1 3142110 R 637887 CDS YP_005689122.1 385779957 12422424 complement(3145280..3145417) 1 NC_017304.1 manually curated; KEGG: cbb:CLD_2459 hypothetical protein; hypothetical protein 3145417 12422424 Clo1313_2680 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689122.1 3145280 R 637887 CDS YP_005689123.1 385779958 12422426 complement(3146054..3146653) 1 NC_017304.1 KEGG: tde:TDE1092 hypothetical protein; hypothetical protein 3146653 12422426 Clo1313_2682 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689123.1 3146054 R 637887 CDS YP_005689124.1 385779959 12422427 complement(3146669..3147625) 1 NC_017304.1 manually curated; PFAM: protein of unknown function DUF1557; KEGG: str:Sterm_0439 Hedgehog/intein hint domain protein; SMART: Hedgehog/intein hint domain protein; hypothetical protein 3147625 12422427 Clo1313_2683 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689124.1 3146669 R 637887 CDS YP_005689125.1 385779960 12422428 complement(3147839..3148456) 1 NC_017304.1 KEGG: bcz:BCZK2568 phosphoesterase-like protein; hypothetical protein 3148456 12422428 Clo1313_2684 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689125.1 3147839 R 637887 CDS YP_005689126.1 385779961 12422430 complement(3150468..3150944) 1 NC_017304.1 KEGG: dhd:Dhaf_3832 transposase IS200-family protein; manually curated; PFAM: transposase IS200-family protein; transposase IS200-family protein 3150944 12422430 Clo1313_2686 Clostridium thermocellum DSM 1313 transposase IS200-family protein YP_005689126.1 3150468 R 637887 CDS YP_005689127.1 385779962 12422431 complement(3151163..3157177) 1 NC_017304.1 manually curated; KEGG: ere:EUBREC_1116 hypothetical protein; hypothetical protein 3157177 12422431 Clo1313_2687 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689127.1 3151163 R 637887 CDS YP_005689128.1 385779963 12422432 complement(3157280..3157594) 1 NC_017304.1 KEGG: aci:ACIAD0089 MviN family virulence factor; hypothetical protein 3157594 12422432 Clo1313_2688 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689128.1 3157280 R 637887 CDS YP_005689129.1 385779964 12422433 complement(3157591..3159474) 1 NC_017304.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: lba:Lebu_0998 serine/threonine protein kinase; Serine/threonine-protein kinase-like domain 3159474 12422433 Clo1313_2689 Clostridium thermocellum DSM 1313 Serine/threonine-protein kinase-like domain YP_005689129.1 3157591 R 637887 CDS YP_005689130.1 385779965 12422435 complement(3160725..3161507) 1 NC_017304.1 KEGG: pth:PTH_0014 metal-dependent hydrolase of the TIM-barrel fold; manually curated; PFAM: amidohydrolase 2; amidohydrolase 2 3161507 12422435 Clo1313_2691 Clostridium thermocellum DSM 1313 amidohydrolase 2 YP_005689130.1 3160725 R 637887 CDS YP_005689131.1 385779966 12422437 complement(3163334..3165757) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: dtu:Dtur_0172 coagulation factor 5/8 type domain protein; Dockerin type 1 3165757 12422437 Clo1313_2693 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005689131.1 3163334 R 637887 CDS YP_005689132.1 385779967 12422438 complement(3166281..3170036) 1 NC_017304.1 KEGG: cce:Ccel_1774 recombination helicase AddA; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; recombination helicase AddA 3170036 12422438 Clo1313_2694 Clostridium thermocellum DSM 1313 recombination helicase AddA YP_005689132.1 3166281 R 637887 CDS YP_005689133.1 385779968 12422439 complement(3170065..3173505) 1 NC_017304.1 TIGRFAM: ATP-dependent nuclease subunit B; KEGG: cce:Ccel_1775 ATP-dependent nuclease subunit B; ATP-dependent nuclease subunit B 3173505 12422439 Clo1313_2695 Clostridium thermocellum DSM 1313 ATP-dependent nuclease subunit B YP_005689133.1 3170065 R 637887 CDS YP_005689134.1 385779969 12422440 complement(3173623..3174069) 1 NC_017304.1 manually curated; KEGG: cbl:CLK_0205 hypothetical protein; hypothetical protein 3174069 12422440 Clo1313_2696 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689134.1 3173623 R 637887 CDS YP_005689135.1 385779970 12422442 complement(3175503..3176108) 1 NC_017304.1 manually curated; KEGG: ptm:GSPATT00020489001 hypothetical protein; hypothetical protein 3176108 12422442 Clo1313_2698 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689135.1 3175503 R 637887 CDS YP_005689136.1 385779971 12422444 3178058..3179209 1 NC_017304.1 PFAM: Integrase catalytic region; transposase IS3/IS911 family protein; KEGG: cce:Ccel_2178 transposase IS3/IS911 family protein; integrase catalytic subunit 3179209 12422444 Clo1313_2700 Clostridium thermocellum DSM 1313 integrase catalytic subunit YP_005689136.1 3178058 D 637887 CDS YP_005689137.1 385779972 12422446 complement(3181550..3182026) 1 NC_017304.1 manually curated; KEGG: ptm:GSPATT00034298001 hypothetical protein; hypothetical protein 3182026 12422446 Clo1313_2702 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689137.1 3181550 R 637887 CDS YP_005689138.1 385779973 12422447 complement(3182072..3182266) 1 NC_017304.1 KEGG: lac:LBA0660 putative protease; hypothetical protein 3182266 12422447 Clo1313_2703 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689138.1 3182072 R 637887 CDS YP_005689139.1 385779974 12422448 complement(3182472..3184121) 1 NC_017304.1 KEGG: str:Sterm_0439 Hedgehog/intein hint domain protein; manually curated; SMART: Hedgehog/intein hint domain protein; Hedgehog/intein hint domain-containing protein 3184121 12422448 Clo1313_2704 Clostridium thermocellum DSM 1313 Hedgehog/intein hint domain-containing protein YP_005689139.1 3182472 R 637887 CDS YP_005689140.1 385779975 12422449 complement(3184298..3184825) 1 NC_017304.1 manually curated; KEGG: tva:TVAG_431080 viral A-type inclusion protein; hypothetical protein 3184825 12422449 Clo1313_2705 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689140.1 3184298 R 637887 CDS YP_005689141.1 385779976 12422450 complement(3184867..3185772) 1 NC_017304.1 PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0362 hypothetical protein; hypothetical protein 3185772 12422450 Clo1313_2706 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689141.1 3184867 R 637887 CDS YP_005689142.1 385779977 12422451 complement(3185735..3186574) 1 NC_017304.1 manually curated; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; KEGG: adg:Adeg_0985 protein of unknown function DUF324; PFAM: protein of unknown function DUF324; CRISPR-associated RAMP protein 3186574 12422451 Clo1313_2707 Clostridium thermocellum DSM 1313 CRISPR-associated RAMP protein YP_005689142.1 3185735 R 637887 CDS YP_005689143.1 385779978 12422452 complement(3186567..3187349) 1 NC_017304.1 manually curated; TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; KEGG: cyb:CYB_0590 CRISPR-associated Csm3 family protein; PFAM: protein of unknown function DUF324; CRISPR-associated RAMP protein 3187349 12422452 Clo1313_2708 Clostridium thermocellum DSM 1313 CRISPR-associated RAMP protein YP_005689143.1 3186567 R 637887 CDS YP_005689144.1 385779979 12422453 complement(3187380..3187772) 1 NC_017304.1 KEGG: mvu:Metvu_1289 protein of unknown function DUF499; hypothetical protein 3187772 12422453 Clo1313_2709 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689144.1 3187380 R 637887 CDS YP_005689145.1 385779980 12422454 complement(3187774..3189021) 1 NC_017304.1 KEGG: ana:all1477 hypothetical protein; hypothetical protein 3189021 12422454 Clo1313_2710 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689145.1 3187774 R 637887 CDS YP_005689146.1 385779981 12422455 complement(3189006..3189551) 1 NC_017304.1 PFAM: protein of unknown function DUF324; KEGG: mfs:MFS40622_0582 CRISPR-associated RAMP protein, Csm3 family; hypothetical protein 3189551 12422455 Clo1313_2711 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689146.1 3189006 R 637887 CDS YP_005689147.1 385779982 12422456 complement(3189557..3191476) 1 NC_017304.1 KEGG: rrs:RoseRS_1438 hypothetical protein; hypothetical protein 3191476 12422456 Clo1313_2712 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689147.1 3189557 R 637887 CDS YP_005689148.1 385779983 12422457 complement(3191484..3192425) 1 NC_017304.1 manually curated; KEGG: paa:Paes_1983 conserved hypothetical cytosolic protein; hypothetical protein 3192425 12422457 Clo1313_2713 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689148.1 3191484 R 637887 CDS YP_005689149.1 385779984 12422458 complement(3192532..3194364) 1 NC_017304.1 KEGG: tex:Teth514_1838 CRISPR-associated TM1812 family protein; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein TM1812; CRISPR-associated protein 3194364 12422458 Clo1313_2714 Clostridium thermocellum DSM 1313 CRISPR-associated protein YP_005689149.1 3192532 R 637887 CDS YP_005689150.1 385779985 12422459 complement(3194753..3195280) 1 NC_017304.1 KEGG: nhl:Nhal_3073 Appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein 3195280 12422459 Clo1313_2715 Clostridium thermocellum DSM 1313 Appr-1-p processing protein YP_005689150.1 3194753 R 637887 CDS YP_005689151.1 385779986 12422462 complement(3195941..3196585) 1 NC_017304.1 KEGG: cce:Ccel_3319 RNA polymerase factor sigma-70; TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3196585 12422462 Clo1313_2716 Clostridium thermocellum DSM 1313 ECF subfamily RNA polymerase sigma-24 subunit YP_005689151.1 3195941 R 637887 CDS YP_005689152.1 385779987 12422463 complement(3196690..3196782) 1 NC_017304.1 hypothetical protein 3196782 12422463 Clo1313_2717 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689152.1 3196690 R 637887 CDS YP_005689153.1 385779988 12422464 complement(3196887..3197720) 1 NC_017304.1 KEGG: cce:Ccel_3320 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase 3197720 12422464 Clo1313_2718 Clostridium thermocellum DSM 1313 TrmH family RNA methyltransferase YP_005689153.1 3196887 R 637887 CDS YP_005689154.1 385779989 12422465 complement(3197871..3198293) 1 NC_017304.1 PFAM: ribonuclease III; KEGG: cce:Ccel_3321 ribonuclease III; ribonuclease III 3198293 12422465 Clo1313_2719 Clostridium thermocellum DSM 1313 ribonuclease III YP_005689154.1 3197871 R 637887 CDS YP_005689155.1 385779990 12422466 3198480..3200015 1 NC_017304.1 KEGG: tmt:Tmath_2129 GerA spore germination protein; manually curated; PFAM: GerA spore germination protein; GerA spore germination protein 3200015 12422466 Clo1313_2720 Clostridium thermocellum DSM 1313 GerA spore germination protein YP_005689155.1 3198480 D 637887 CDS YP_005689156.1 385779991 12422467 3200005..3201126 1 NC_017304.1 KEGG: bbe:BBR47_16340 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; spore germination protein 3201126 12422467 Clo1313_2721 Clostridium thermocellum DSM 1313 spore germination protein YP_005689156.1 3200005 D 637887 CDS YP_005689157.1 385779992 12422468 3201110..3202381 1 NC_017304.1 KEGG: tjr:TherJR_2528 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; Ger(x)C family germination protein 3202381 12422468 Clo1313_2722 Clostridium thermocellum DSM 1313 Ger(x)C family germination protein YP_005689157.1 3201110 D 637887 CDS YP_005689158.1 385779993 12422469 complement(3202470..3203876) 1 NC_017304.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: cno:NT01CX_1093 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase 3203876 12422469 Clo1313_2723 Clostridium thermocellum DSM 1313 cysteinyl-tRNA synthetase YP_005689158.1 3202470 R 637887 CDS YP_005689159.1 385779994 12422470 complement(3203863..3204609) 1 NC_017304.1 TIGRFAM: serine O-acetyltransferase; KEGG: cce:Ccel_3325 serine O-acetyltransferase; serine O-acetyltransferase 3204609 12422470 Clo1313_2724 Clostridium thermocellum DSM 1313 serine O-acetyltransferase YP_005689159.1 3203863 R 637887 CDS YP_005689160.1 385779995 12422471 3205238..3205645 1 NC_017304.1 PFAM: membrane protein of unknown function; KEGG: cce:Ccel_2873 membrane protein of unknown function; membrane protein 3205645 12422471 Clo1313_2725 Clostridium thermocellum DSM 1313 membrane protein YP_005689160.1 3205238 D 637887 CDS YP_005689161.1 385779996 12422473 complement(3206110..3206997) 1 NC_017304.1 PFAM: 8-oxoguanine DNA glycosylase domain-containing protein; HhH-GPD family protein; KEGG: cce:Ccel_3329 8-oxoguanine DNA glycosylase domain protein; SMART: HhH-GPD family protein; DNA-(apurinic or apyrimidinic site) lyase 3206997 12422473 Clo1313_2726 Clostridium thermocellum DSM 1313 DNA-(apurinic or apyrimidinic site) lyase YP_005689161.1 3206110 R 637887 CDS YP_005689162.1 385779997 12422474 3207237..3208013 1 NC_017304.1 KEGG: cce:Ccel_3330 hypothetical protein; hypothetical protein 3208013 12422474 Clo1313_2727 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689162.1 3207237 D 637887 CDS YP_005689163.1 385779998 12422475 complement(3208006..3208863) 1 NC_017304.1 KEGG: cce:Ccel_3339 hypothetical protein; hypothetical protein 3208863 12422475 Clo1313_2728 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689163.1 3208006 R 637887 CDS YP_005689164.1 385779999 12422476 complement(3209478..3210401) 1 NC_017304.1 KEGG: cce:Ccel_3340 sporulation protein YtxC; TIGRFAM: sporulation protein YtxC; PFAM: Sporulation protein YtxC; sporulation protein YtxC 3210401 12422476 Clo1313_2729 Clostridium thermocellum DSM 1313 sporulation protein YtxC YP_005689164.1 3209478 R 637887 CDS YP_005689165.1 385780000 12422477 complement(3210635..3211387) 1 NC_017304.1 KEGG: cce:Ccel_3341 hypothetical protein; hypothetical protein 3211387 12422477 Clo1313_2730 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689165.1 3210635 R 637887 CDS YP_005689166.1 385780001 12422478 3212138..3213319 1 NC_017304.1 TIGRFAM: amidohydrolase; KEGG: dtu:Dtur_0066 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3213319 12422478 Clo1313_2731 Clostridium thermocellum DSM 1313 amidohydrolase YP_005689166.1 3212138 D 637887 CDS YP_005689167.1 385780002 12422479 3213443..3213661 1 NC_017304.1 PFAM: protein of unknown function DUF378; KEGG: cce:Ccel_3342 protein of unknown function DUF378; hypothetical protein 3213661 12422479 Clo1313_2732 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689167.1 3213443 D 637887 CDS YP_005689168.1 385780003 12422480 complement(3213788..3213958) 1 NC_017304.1 KEGG: pyo:PY02600 hypothetical protein; hypothetical protein 3213958 12422480 Clo1313_2733 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689168.1 3213788 R 637887 CDS YP_005689169.1 385780004 12422482 complement(3214190..3214918) 1 NC_017304.1 PFAM: protein of unknown function DUF28; KEGG: cce:Ccel_0181 hypothetical protein; hypothetical protein 3214918 12422482 Clo1313_2734 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689169.1 3214190 R 637887 CDS YP_005689170.1 385780005 12422483 3215194..3216357 1 NC_017304.1 KEGG: cno:NT01CX_0224 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3216357 12422483 Clo1313_2735 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005689170.1 3215194 D 637887 CDS YP_005689171.1 385780006 12422484 complement(3216444..3216818) 1 NC_017304.1 PFAM: CoA-binding domain protein; KEGG: cce:Ccel_1777 CoA-binding domain protein; CoA-binding protein 3216818 12422484 Clo1313_2736 Clostridium thermocellum DSM 1313 CoA-binding protein YP_005689171.1 3216444 R 637887 CDS YP_005689172.1 385780007 12422485 complement(3216891..3217547) 1 NC_017304.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: cce:Ccel_0180 protein of unknown function UPF0029; hypothetical protein 3217547 12422485 Clo1313_2737 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689172.1 3216891 R 637887 CDS YP_005689173.1 385780008 12422486 3217798..3218364 1 NC_017304.1 KEGG: cce:Ccel_2462 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 3218364 12422486 Clo1313_2738 Clostridium thermocellum DSM 1313 signal peptidase I YP_005689173.1 3217798 D 637887 CDS YP_005689174.1 385780009 12422487 complement(3218479..3219051) 1 NC_017304.1 PFAM: NUDIX hydrolase; KEGG: cce:Ccel_0179 NUDIX hydrolase; NUDIX hydrolase 3219051 12422487 Clo1313_2739 Clostridium thermocellum DSM 1313 NUDIX hydrolase YP_005689174.1 3218479 R 637887 CDS YP_005689175.1 385780010 12422488 complement(3219201..3221027) 1 NC_017304.1 manually curated; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; KEGG: cce:Ccel_0178 GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; GTP-binding proten HflX 3221027 12422488 Clo1313_2740 Clostridium thermocellum DSM 1313 GTP-binding proten HflX YP_005689175.1 3219201 R 637887 CDS YP_005689176.1 385780011 12422489 complement(3221109..3221333) 1 NC_017304.1 KEGG: csc:Csac_0616 hypothetical protein; hypothetical protein 3221333 12422489 Clo1313_2741 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689176.1 3221109 R 637887 CDS YP_005689177.1 385780012 12422490 complement(3221375..3222574) 1 NC_017304.1 KEGG: cce:Ccel_2007 UMUC domain protein DNA-repair protein; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 3222574 12422490 Clo1313_2742 Clostridium thermocellum DSM 1313 DNA-directed DNA polymerase YP_005689177.1 3221375 R 637887 CDS YP_005689178.1 385780013 12422491 complement(3223374..3223892) 1 NC_017304.1 KEGG: cce:Ccel_0177 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 3223892 12422491 Clo1313_2743 Clostridium thermocellum DSM 1313 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_005689178.1 3223374 R 637887 CDS YP_005689179.1 385780014 12422492 complement(3223996..3226515) 1 NC_017304.1 PFAM: peptidase U32; Peptidase U32, collagenase; KEGG: cce:Ccel_0176 peptidase U32; peptidase U32 3226515 12422492 Clo1313_2744 Clostridium thermocellum DSM 1313 peptidase U32 YP_005689179.1 3223996 R 637887 CDS YP_005689180.1 385780015 12422493 complement(3226512..3227396) 1 NC_017304.1 PFAM: metalloenzyme domain protein; KEGG: cce:Ccel_0175 metalloenzyme domain protein; metalloenzyme domain-containing protein 3227396 12422493 Clo1313_2745 Clostridium thermocellum DSM 1313 metalloenzyme domain-containing protein YP_005689180.1 3226512 R 637887 CDS YP_005689181.1 385780016 12422494 complement(3227474..3227884) 1 NC_017304.1 PFAM: protein of unknown function DUF710; KEGG: cce:Ccel_0174 protein of unknown function DUF710; hypothetical protein 3227884 12422494 Clo1313_2746 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689181.1 3227474 R 637887 CDS YP_005689182.1 385780017 12422495 complement(3228085..3230319) 1 NC_017304.1 KEGG: csc:Csac_1076 glycoside hydrolase family protein; manually curated; PFAM: glycoside hydrolase family 48; Dockerin type 1; glycoside hydrolase 3230319 12422495 Clo1313_2747 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689182.1 3228085 R 637887 CDS YP_005689183.1 385780018 12422496 complement(3231203..3231781) 1 NC_017304.1 KEGG: amt:Amet_1371 hypothetical protein; hypothetical protein 3231781 12422496 Clo1313_2748 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689183.1 3231203 R 637887 CDS YP_005689184.1 385780019 12422497 complement(3231939..3233237) 1 NC_017304.1 KEGG: cce:Ccel_0172 hypothetical protein; hypothetical protein 3233237 12422497 Clo1313_2749 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689184.1 3231939 R 637887 CDS YP_005689185.1 385780020 12422498 complement(3233468..3234322) 1 NC_017304.1 SMART: Ribosomal RNA adenine methylase transferase-like; TIGRFAM: dimethyladenosine transferase; KEGG: cce:Ccel_0171 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 3234322 12422498 Clo1313_2750 Clostridium thermocellum DSM 1313 dimethyladenosine transferase YP_005689185.1 3233468 R 637887 CDS YP_005689186.1 385780021 12422499 complement(3234542..3235600) 1 NC_017304.1 PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348; KEGG: cce:Ccel_0170 3D domain protein; hypothetical protein 3235600 12422499 Clo1313_2751 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689186.1 3234542 R 637887 CDS YP_005689187.1 385780022 12422500 complement(3235944..3236495) 1 NC_017304.1 KEGG: bfo:BRAFLDRAFT_86148 hypothetical protein; hypothetical protein 3236495 12422500 Clo1313_2752 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689187.1 3235944 R 637887 CDS YP_005689188.1 385780023 12422501 complement(3236602..3237369) 1 NC_017304.1 KEGG: cce:Ccel_0168 hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 3237369 12422501 Clo1313_2753 Clostridium thermocellum DSM 1313 TatD family hydrolase YP_005689188.1 3236602 R 637887 CDS YP_005689189.1 385780024 12422502 complement(3237422..3239386) 1 NC_017304.1 KEGG: tte:TTE0110 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; methionyl-tRNA synthetase 3239386 12422502 Clo1313_2754 Clostridium thermocellum DSM 1313 methionyl-tRNA synthetase YP_005689189.1 3237422 R 637887 CDS YP_005689190.1 385780025 12422503 3239627..3240670 1 NC_017304.1 PFAM: Protein of unknown function DUF2600; KEGG: dsy:DSY2213 hypothetical protein; hypothetical protein 3240670 12422503 Clo1313_2755 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689190.1 3239627 D 637887 CDS YP_005689191.1 385780026 12422504 complement(3240675..3241208) 1 NC_017304.1 KEGG: cce:Ccel_0166 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 3241208 12422504 Clo1313_2756 Clostridium thermocellum DSM 1313 nucleoside recognition domain-containing protein YP_005689191.1 3240675 R 637887 CDS YP_005689192.1 385780027 12422505 complement(3241205..3241837) 1 NC_017304.1 PFAM: nucleoside recognition domain protein; KEGG: cce:Ccel_0165 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 3241837 12422505 Clo1313_2757 Clostridium thermocellum DSM 1313 nucleoside recognition domain-containing protein YP_005689192.1 3241205 R 637887 CDS YP_005689193.1 385780028 12422506 3242269..3242508 1 NC_017304.1 KEGG: cce:Ccel_0164 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; AbrB family transcriptional regulator 3242508 12422506 Clo1313_2758 Clostridium thermocellum DSM 1313 AbrB family transcriptional regulator YP_005689193.1 3242269 D 637887 CDS YP_005689194.1 385780029 12422507 complement(3242630..3243472) 1 NC_017304.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cce:Ccel_0163 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 3243472 12422507 Clo1313_2759 Clostridium thermocellum DSM 1313 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_005689194.1 3242630 R 637887 CDS YP_005689195.1 385780030 12422508 complement(3243465..3244229) 1 NC_017304.1 PFAM: Methyltransferase type 11; KEGG: cce:Ccel_0162 methyltransferase type 11; type 11 methyltransferase 3244229 12422508 Clo1313_2760 Clostridium thermocellum DSM 1313 type 11 methyltransferase YP_005689195.1 3243465 R 637887 CDS YP_005689196.1 385780031 12422509 complement(3244505..3244675) 1 NC_017304.1 KEGG: cce:Ccel_0161 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3244675 12422509 Clo1313_2761 Clostridium thermocellum DSM 1313 4Fe-4S ferredoxin YP_005689196.1 3244505 R 637887 CDS YP_005689197.1 385780032 12422510 complement(3244820..3245695) 1 NC_017304.1 PFAM: PSP1 domain protein; KEGG: cce:Ccel_0160 PSP1 domain protein; PSP1 domain-containing protein 3245695 12422510 Clo1313_2762 Clostridium thermocellum DSM 1313 PSP1 domain-containing protein YP_005689197.1 3244820 R 637887 CDS YP_005689198.1 385780033 12422511 complement(3245695..3246684) 1 NC_017304.1 SMART: AAA ATPase; KEGG: cce:Ccel_0159 DNA polymerase III, delta prime subunit; AAA ATPase 3246684 12422511 Clo1313_2763 Clostridium thermocellum DSM 1313 AAA ATPase YP_005689198.1 3245695 R 637887 CDS YP_005689199.1 385780034 12422512 complement(3246825..3247277) 1 NC_017304.1 PFAM: protein of unknown function DUF327; KEGG: cce:Ccel_0158 protein of unknown function DUF327; hypothetical protein 3247277 12422512 Clo1313_2764 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689199.1 3246825 R 637887 CDS YP_005689200.1 385780035 12422513 complement(3247359..3248042) 1 NC_017304.1 PFAM: thymidylate kinase; KEGG: clj:CLJU_c01390 thymidylate kinase; thymidylate kinase 3248042 12422513 Clo1313_2765 Clostridium thermocellum DSM 1313 thymidylate kinase YP_005689200.1 3247359 R 637887 CDS YP_005689201.1 385780036 12422514 complement(3248069..3249508) 1 NC_017304.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: cce:Ccel_0155 Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase major region 3249508 12422514 Clo1313_2766 Clostridium thermocellum DSM 1313 Orn/Lys/Arg decarboxylase major region YP_005689201.1 3248069 R 637887 CDS YP_005689202.1 385780037 12422515 complement(3249508..3249690) 1 NC_017304.1 KEGG: tps:THAPSDRAFT_37559 hypothetical protein; hypothetical protein 3249690 12422515 Clo1313_2767 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689202.1 3249508 R 637887 CDS YP_005689203.1 385780038 12422516 complement(3249799..3252336) 1 NC_017304.1 PFAM: Beta propeller domain; copper amine oxidase-like domain-containing protein; KEGG: pth:PTH_0613 secreted protein; beta propeller domain 3252336 12422516 Clo1313_2768 Clostridium thermocellum DSM 1313 beta propeller domain YP_005689203.1 3249799 R 637887 CDS YP_005689204.1 385780039 12422517 3252661..3253434 1 NC_017304.1 KEGG: bcl:ABC0252 peptide ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3253434 12422517 Clo1313_2769 Clostridium thermocellum DSM 1313 ABC transporter YP_005689204.1 3252661 D 637887 CDS YP_005689205.1 385780040 12422518 3253424..3255481 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: aoe:Clos_0981 hypothetical protein; hypothetical protein 3255481 12422518 Clo1313_2770 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689205.1 3253424 D 637887 CDS YP_005689206.1 385780041 12422519 3255510..3256211 1 NC_017304.1 KEGG: bcl:ABC0254 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3256211 12422519 Clo1313_2771 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005689206.1 3255510 D 637887 CDS YP_005689207.1 385780042 12422520 3256186..3257211 1 NC_017304.1 KEGG: bha:BH0289 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 3257211 12422520 Clo1313_2772 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005689207.1 3256186 D 637887 CDS YP_005689208.1 385780043 12422521 3257685..3257972 1 NC_017304.1 PFAM: protein of unknown function DUF77; KEGG: cbt:CLH_1406 hypothetical protein; hypothetical protein 3257972 12422521 Clo1313_2773 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689208.1 3257685 D 637887 CDS YP_005689209.1 385780044 12422522 3257947..3258708 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CA_C1399 ABC transporter, permease component; binding-protein-dependent transport system inner membrane protein 3258708 12422522 Clo1313_2774 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005689209.1 3257947 D 637887 CDS YP_005689210.1 385780045 12422523 3258715..3259743 1 NC_017304.1 KEGG: str:Sterm_2065 NMT1/THI5 like domain protein; NMT1/THI5 like domain-containing protein 3259743 12422523 Clo1313_2775 Clostridium thermocellum DSM 1313 NMT1/THI5 like domain-containing protein YP_005689210.1 3258715 D 637887 CDS YP_005689211.1 385780046 12422524 3259836..3260588 1 NC_017304.1 KEGG: str:Sterm_2066 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3260588 12422524 Clo1313_2776 Clostridium thermocellum DSM 1313 ABC transporter YP_005689211.1 3259836 D 637887 CDS YP_005689212.1 385780047 12422525 complement(3260669..3262951) 1 NC_017304.1 KEGG: bpu:BPUM_1560 glycoside hydrolase; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10; glycoside hydrolase 3262951 12422525 Clo1313_2777 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689212.1 3260669 R 637887 CDS YP_005689213.1 385780048 12422526 complement(3262948..3263709) 1 NC_017304.1 TIGRFAM: RNA polymerase sigma-I factor; KEGG: cce:Ccel_1739 putative RNA polymerase sigma factor SigI; RNA polymerase sigma-I factor 3263709 12422526 Clo1313_2778 Clostridium thermocellum DSM 1313 RNA polymerase sigma-I factor YP_005689213.1 3262948 R 637887 CDS YP_005689214.1 385780049 12422527 complement(3264076..3264786) 1 NC_017304.1 KEGG: cce:Ccel_3235 hypothetical protein; hypothetical protein 3264786 12422527 Clo1313_2779 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689214.1 3264076 R 637887 CDS YP_005689215.1 385780050 12422528 3265077..3265352 1 NC_017304.1 KEGG: shc:Shell_1389 translation initiation factor eIF-6; hypothetical protein 3265352 12422528 Clo1313_2780 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689215.1 3265077 D 637887 CDS YP_005689216.1 385780051 12422529 complement(3265349..3266761) 1 NC_017304.1 PFAM: Trypanosome RHS; KEGG: cac:CA_C0668 hypothetical protein; Trypanosome RHS 3266761 12422529 Clo1313_2781 Clostridium thermocellum DSM 1313 Trypanosome RHS YP_005689216.1 3265349 R 637887 CDS YP_005689217.1 385780052 12422530 complement(3266772..3268115) 1 NC_017304.1 KEGG: amt:Amet_4741 RND family efflux transporter MFP subunit; hypothetical protein 3268115 12422530 Clo1313_2782 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689217.1 3266772 R 637887 CDS YP_005689218.1 385780053 12422531 complement(3268129..3269043) 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_4742 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3269043 12422531 Clo1313_2783 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005689218.1 3268129 R 637887 CDS YP_005689219.1 385780054 12422532 complement(3269071..3269982) 1 NC_017304.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CA_C0665 ABC-type sugar transport system, permease component; binding-protein-dependent transport system inner membrane protein 3269982 12422532 Clo1313_2784 Clostridium thermocellum DSM 1313 binding-protein-dependent transport system inner membrane protein YP_005689219.1 3269071 R 637887 CDS YP_005689220.1 385780055 12422533 complement(3270058..3270852) 1 NC_017304.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: cce:Ccel_2538 ATPase associated with various cellular activities AAA_3; ATPase 3270852 12422533 Clo1313_2785 Clostridium thermocellum DSM 1313 ATPase YP_005689220.1 3270058 R 637887 CDS YP_005689221.1 385780056 12422534 complement(3271028..3272410) 1 NC_017304.1 PFAM: extracellular solute-binding protein family 1; KEGG: cac:CA_C0664 sugar-binding periplasmic protein; extracellular solute-binding protein 3272410 12422534 Clo1313_2786 Clostridium thermocellum DSM 1313 extracellular solute-binding protein YP_005689221.1 3271028 R 637887 CDS YP_005689222.1 385780057 12422536 complement(3272894..3274096) 1 NC_017304.1 KEGG: cce:Ccel_0254 hypothetical protein; hypothetical protein 3274096 12422536 Clo1313_2788 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689222.1 3272894 R 637887 CDS YP_005689223.1 385780058 12422537 complement(3274228..3274596) 1 NC_017304.1 PFAM: Protein of unknown function DUF2089; KEGG: cce:Ccel_0253 hypothetical protein; hypothetical protein 3274596 12422537 Clo1313_2789 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689223.1 3274228 R 637887 CDS YP_005689224.1 385780059 12422538 3275041..3276339 1 NC_017304.1 KEGG: amt:Amet_0237 abortive infection protein, putative; hypothetical protein 3276339 12422538 Clo1313_2790 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689224.1 3275041 D 637887 CDS YP_005689225.1 385780060 12422539 3276339..3276950 1 NC_017304.1 KEGG: afn:Acfer_0737 hypothetical protein; hypothetical protein 3276950 12422539 Clo1313_2791 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689225.1 3276339 D 637887 CDS YP_005689226.1 385780061 12422541 3277761..3280193 1 NC_017304.1 PFAM: Carbohydrate binding family 6; Dockerin type 1; KEGG: pjd:Pjdr2_2552 ricin B lectin; carbohydrate binding family protein 3280193 12422541 Clo1313_2793 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005689226.1 3277761 D 637887 CDS YP_005689227.1 385780062 12422542 3280523..3282265 1 NC_017304.1 KEGG: scl:sce1246 putative alpha-arabinofuranosidase; manually curated; PFAM: glycoside hydrolase family 43; alpha-L-arabinofuranosidase B; Dockerin type 1; glycoside hydrolase 3282265 12422542 Clo1313_2794 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689227.1 3280523 D 637887 CDS YP_005689228.1 385780063 12422543 3282325..3285273 1 NC_017304.1 PFAM: alpha-L-arabinofuranosidase B; Dockerin type 1; glycoside hydrolase family 30; KEGG: scl:sce0966 hypothetical protein; alpha-L-arabinofuranosidase 3285273 12422543 Clo1313_2795 Clostridium thermocellum DSM 1313 alpha-L-arabinofuranosidase YP_005689228.1 3282325 D 637887 CDS YP_005689229.1 385780064 12422544 complement(3285503..3286825) 1 NC_017304.1 KEGG: mta:Moth_0065 hypothetical protein; hypothetical protein 3286825 12422544 Clo1313_2796 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689229.1 3285503 R 637887 CDS YP_005689230.1 385780065 12422545 complement(3286977..3287171) 1 NC_017304.1 KEGG: smc:SmuNN2025_0438 hypothetical protein; hypothetical protein 3287171 12422545 Clo1313_2797 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689230.1 3286977 R 637887 CDS YP_005689231.1 385780066 12422546 complement(3287225..3288412) 1 NC_017304.1 KEGG: fsu:Fisuc_1158 metal-dependent phosphohydrolase HD sub domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal-dependent phosphohydrolase HD sub domain 3288412 12422546 Clo1313_2798 Clostridium thermocellum DSM 1313 metal-dependent phosphohydrolase HD sub domain YP_005689231.1 3287225 R 637887 CDS YP_005689232.1 385780067 12422548 complement(3288935..3289534) 1 NC_017304.1 SMART: Toprim sub domain-containing protein; manually curated; KEGG: cce:Ccel_0244 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; recombination protein RecR 3289534 12422548 Clo1313_2800 Clostridium thermocellum DSM 1313 recombination protein RecR YP_005689232.1 3288935 R 637887 CDS YP_005689233.1 385780068 12422549 complement(3289566..3289907) 1 NC_017304.1 PFAM: Uncharacterised protein family UPF0133; KEGG: cce:Ccel_0243 hypothetical protein; hypothetical protein 3289907 12422549 Clo1313_2801 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689233.1 3289566 R 637887 CDS YP_005689234.1 385780069 12422550 complement(3290024..3291667) 1 NC_017304.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: cce:Ccel_0242 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 3291667 12422550 Clo1313_2802 Clostridium thermocellum DSM 1313 DNA polymerase III subunits gamma and tau YP_005689234.1 3290024 R 637887 CDS YP_005689235.1 385780070 12422553 3293632..3293973 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: dae:Dtox_4298 copper amine oxidase domain protein; copper amine oxidase-like domain-containing protein 3293973 12422553 Clo1313_2804 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005689235.1 3293632 D 637887 CDS YP_005689236.1 385780071 12422554 3294219..3296201 1 NC_017304.1 PFAM: glycoside hydrolase family 5; Dockerin type 1; type 3a cellulose-binding domain protein; KEGG: csc:Csac_1078 cellulose 1,4-beta-cellobiosidase; glycoside hydrolase 3296201 12422554 Clo1313_2805 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689236.1 3294219 D 637887 CDS YP_005689237.1 385780072 12422555 complement(3296316..3297080) 1 NC_017304.1 PFAM: Carbohydrate-binding CenC domain protein; KEGG: hvo:HVO_B0215 probable secreted glycosyl hydrolase; carbohydrate-binding CenC domain-containing protein 3297080 12422555 Clo1313_2806 Clostridium thermocellum DSM 1313 carbohydrate-binding CenC domain-containing protein YP_005689237.1 3296316 R 637887 CDS YP_005689238.1 385780073 12422556 complement(3297128..3298417) 1 NC_017304.1 PFAM: amine oxidase; KEGG: xal:XALc_2703 probable protoporphyrinogen oxidase protein; amine oxidase 3298417 12422556 Clo1313_2807 Clostridium thermocellum DSM 1313 amine oxidase YP_005689238.1 3297128 R 637887 CDS YP_005689239.1 385780074 12422557 complement(3298462..3299808) 1 NC_017304.1 KEGG: cac:CA_C0354 hypothetical protein; hypothetical protein 3299808 12422557 Clo1313_2808 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689239.1 3298462 R 637887 CDS YP_005689240.1 385780075 12422558 complement(3299910..3302279) 1 NC_017304.1 KEGG: cpy:Cphy_2889 hypothetical protein; hypothetical protein 3302279 12422558 Clo1313_2809 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689240.1 3299910 R 637887 CDS YP_005689241.1 385780076 12422559 complement(3302328..3302846) 1 NC_017304.1 KEGG: dhd:Dhaf_2536 hypothetical protein; manually curated; PFAM: GtrA family protein; GtrA family protein 3302846 12422559 Clo1313_2810 Clostridium thermocellum DSM 1313 GtrA family protein YP_005689241.1 3302328 R 637887 CDS YP_005689242.1 385780077 12422561 3303140..3304015 1 NC_017304.1 PFAM: Methyltransferase type 11; KEGG: psl:Psta_1523 methyltransferase type 11; type 11 methyltransferase 3304015 12422561 Clo1313_2811 Clostridium thermocellum DSM 1313 type 11 methyltransferase YP_005689242.1 3303140 D 637887 CDS YP_005689243.1 385780078 12422562 complement(3304274..3306169) 1 NC_017304.1 PFAM: S-layer domain-containing protein; KEGG: gym:GYMC10_4794 legume lectin beta domain protein; S-layer protein 3306169 12422562 Clo1313_2812 Clostridium thermocellum DSM 1313 S-layer protein YP_005689243.1 3304274 R 637887 CDS YP_005689244.1 385780079 12422563 complement(3306229..3306507) 1 NC_017304.1 KEGG: nfi:NFIA_003740 hybrid PKS/NRPS enzyme, putative; hypothetical protein 3306507 12422563 Clo1313_2813 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689244.1 3306229 R 637887 CDS YP_005689245.1 385780080 12422564 complement(3306561..3306893) 1 NC_017304.1 KEGG: ptm:GSPATT00028784001 hypothetical protein; hypothetical protein 3306893 12422564 Clo1313_2814 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689245.1 3306561 R 637887 CDS YP_005689246.1 385780081 12422565 complement(3307455..3308315) 1 NC_017304.1 KEGG: ccu:Ccur_03560 hypothetical protein; hypothetical protein 3308315 12422565 Clo1313_2815 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689246.1 3307455 R 637887 CDS YP_005689247.1 385780082 12422566 complement(3308367..3310781) 1 NC_017304.1 PFAM: Spore coat protein CotH; KEGG: amt:Amet_0190 spore coat protein CotH; spore coat protein CotH 3310781 12422566 Clo1313_2816 Clostridium thermocellum DSM 1313 spore coat protein CotH YP_005689247.1 3308367 R 637887 CDS YP_005689248.1 385780083 12422567 complement(3311093..3311251) 1 NC_017304.1 KEGG: pfh:PFHG_04900 hypothetical protein; hypothetical protein 3311251 12422567 Clo1313_2817 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689248.1 3311093 R 637887 CDS YP_005689249.1 385780084 12422568 complement(3311550..3311672) 1 NC_017304.1 KEGG: cbt:CLH_1355 putative autoinducer prepeptide; autoinducer prepeptide 3311672 12422568 Clo1313_2818 Clostridium thermocellum DSM 1313 autoinducer prepeptide YP_005689249.1 3311550 R 637887 CDS YP_005689250.1 385780085 12422569 complement(3311764..3312645) 1 NC_017304.1 KEGG: cce:Ccel_2792 hypothetical protein; hypothetical protein 3312645 12422569 Clo1313_2819 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689250.1 3311764 R 637887 CDS YP_005689251.1 385780086 12422570 complement(3312818..3313534) 1 NC_017304.1 PFAM: peptidase C26; KEGG: cce:Ccel_3356 peptidase C26; peptidase C26 3313534 12422570 Clo1313_2820 Clostridium thermocellum DSM 1313 peptidase C26 YP_005689251.1 3312818 R 637887 CDS YP_005689252.1 385780087 12422571 complement(3313764..3314099) 1 NC_017304.1 KEGG: ddf:DEFDS_0429 anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 3314099 12422571 Clo1313_2821 Clostridium thermocellum DSM 1313 anti-sigma-factor antagonist YP_005689252.1 3313764 R 637887 CDS YP_005689253.1 385780088 12422572 3314574..3314714 1 NC_017304.1 hypothetical protein 3314714 12422572 Clo1313_2822 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689253.1 3314574 D 637887 CDS YP_005689254.1 385780089 12422573 complement(3314775..3314933) 1 NC_017304.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cce:Ccel_3357 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 3314933 12422573 Clo1313_2823 Clostridium thermocellum DSM 1313 rubredoxin-type Fe(Cys)4 protein YP_005689254.1 3314775 R 637887 CDS YP_005689255.1 385780090 12422574 complement(3315085..3315678) 1 NC_017304.1 KEGG: cce:Ccel_3360 sporulation protein YyaC; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; sporulation protein YyaC 3315678 12422574 Clo1313_2824 Clostridium thermocellum DSM 1313 sporulation protein YyaC YP_005689255.1 3315085 R 637887 CDS YP_005689256.1 385780091 12422575 3315931..3317067 1 NC_017304.1 TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E; PAS fold domain protein; KEGG: cce:Ccel_3361 putative PAS/PAC sensor protein; SMART: protein phosphatase 2C domain protein; PAS/PAC sensor protein 3317067 12422575 Clo1313_2825 Clostridium thermocellum DSM 1313 PAS/PAC sensor protein YP_005689256.1 3315931 D 637887 CDS YP_005689257.1 385780092 12422576 complement(3317068..3318210) 1 NC_017304.1 KEGG: cpf:CPF_2247 glycosy hydrolase family protein; glucosyl hydrolase family protein 3318210 12422576 Clo1313_2826 Clostridium thermocellum DSM 1313 glucosyl hydrolase family protein YP_005689257.1 3317068 R 637887 CDS YP_005689258.1 385780093 12422577 complement(3318356..3320551) 1 NC_017304.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: tjr:TherJR_2662 S-layer domain protein; propeptide PepSY amd peptidase M4 3320551 12422577 Clo1313_2827 Clostridium thermocellum DSM 1313 propeptide PepSY amd peptidase M4 YP_005689258.1 3318356 R 637887 CDS YP_005689259.1 385780094 12422578 complement(3320670..3321491) 1 NC_017304.1 PFAM: metallophosphoesterase; KEGG: mma:MM_0540 hypothetical protein; metallophosphoesterase 3321491 12422578 Clo1313_2828 Clostridium thermocellum DSM 1313 metallophosphoesterase YP_005689259.1 3320670 R 637887 CDS YP_005689260.1 385780095 12422579 3321655..3322764 1 NC_017304.1 KEGG: cbi:CLJ_B3043 hypothetical protein; hypothetical protein 3322764 12422579 Clo1313_2829 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689260.1 3321655 D 637887 CDS YP_005689261.1 385780096 12422580 complement(3322801..3325770) 1 NC_017304.1 KEGG: sti:Sthe_2206 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; type III restriction protein res subunit 3325770 12422580 Clo1313_2830 Clostridium thermocellum DSM 1313 type III restriction protein res subunit YP_005689261.1 3322801 R 637887 CDS YP_005689262.1 385780097 12422581 complement(3325966..3326169) 1 NC_017304.1 KEGG: cce:Ccel_3375 ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 3326169 12422581 Clo1313_2831 Clostridium thermocellum DSM 1313 50S ribosomal protein L31 YP_005689262.1 3325966 R 637887 CDS YP_005689263.1 385780098 12422582 complement(3326317..3328269) 1 NC_017304.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: cce:Ccel_3376 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 3328269 12422582 Clo1313_2832 Clostridium thermocellum DSM 1313 transcription termination factor Rho YP_005689263.1 3326317 R 637887 CDS YP_005689264.1 385780099 12422583 complement(3328630..3328722) 1 NC_017304.1 hypothetical protein 3328722 12422583 Clo1313_2833 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689264.1 3328630 R 637887 CDS YP_005689265.1 385780100 12422584 complement(3328786..3329454) 1 NC_017304.1 KEGG: tjr:TherJR_2918 hypothetical protein; hypothetical protein 3329454 12422584 Clo1313_2834 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689265.1 3328786 R 637887 CDS YP_005689266.1 385780101 12422585 3329767..3330645 1 NC_017304.1 PFAM: Abortive infection protein; KEGG: amt:Amet_1042 abortive infection protein; abortive infection protein 3330645 12422585 Clo1313_2835 Clostridium thermocellum DSM 1313 abortive infection protein YP_005689266.1 3329767 D 637887 CDS YP_005689267.1 385780102 12422586 3330767..3330964 1 NC_017304.1 KEGG: cce:Ccel_0636 hypothetical protein; hypothetical protein 3330964 12422586 Clo1313_2836 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689267.1 3330767 D 637887 CDS YP_005689268.1 385780103 12422587 3331090..3331551 1 NC_017304.1 KEGG: cce:Ccel_0637 hypothetical protein; hypothetical protein 3331551 12422587 Clo1313_2837 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689268.1 3331090 D 637887 CDS YP_005689269.1 385780104 12422588 complement(3332025..3332174) 1 NC_017304.1 KEGG: bta:518737 WD repeat domain 88; hypothetical protein 3332174 12422588 Clo1313_2838 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689269.1 3332025 R 637887 CDS YP_005689270.1 385780105 12422589 complement(3332167..3332460) 1 NC_017304.1 KEGG: rpe:RPE_1469 major facilitator transporter; hypothetical protein 3332460 12422589 Clo1313_2839 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689270.1 3332167 R 637887 CDS YP_005689271.1 385780106 12422590 complement(3332658..3333776) 1 NC_017304.1 PFAM: acyltransferase 3; KEGG: cce:Ccel_2617 acyltransferase 3; acyltransferase 3 3333776 12422590 Clo1313_2840 Clostridium thermocellum DSM 1313 acyltransferase 3 YP_005689271.1 3332658 R 637887 CDS YP_005689272.1 385780107 12422591 3333842..3334171 1 NC_017304.1 KEGG: cgr:CAGL0K10472g hypothetical protein; hypothetical protein 3334171 12422591 Clo1313_2841 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689272.1 3333842 D 637887 CDS YP_005689273.1 385780108 12422593 complement(3334494..3335540) 1 NC_017304.1 KEGG: ate:Athe_1855 pectate disaccharide-lyase; pectate disaccharide-lyase 3335540 12422593 Clo1313_2842 Clostridium thermocellum DSM 1313 pectate disaccharide-lyase YP_005689273.1 3334494 R 637887 CDS YP_005689274.1 385780109 12422594 complement(3335549..3337246) 1 NC_017304.1 KEGG: cce:Ccel_2243 pectate lyase/Amb allergen; PFAM: Pectate lyase/Amb allergen; Dockerin type 1; SMART: Pectate lyase/Amb allergen; Parallel beta-helix repeat; Pectate lyase/Amb allergen 3337246 12422594 Clo1313_2843 Clostridium thermocellum DSM 1313 Pectate lyase/Amb allergen YP_005689274.1 3335549 R 637887 CDS YP_005689275.1 385780110 12422596 3338109..3339407 1 NC_017304.1 PFAM: Cl- channel voltage-gated family protein; KEGG: cdf:CD0656 putative chloride ion channel protein; Cl- channel voltage-gated family protein 3339407 12422596 Clo1313_2844 Clostridium thermocellum DSM 1313 Cl- channel voltage-gated family protein YP_005689275.1 3338109 D 637887 CDS YP_005689276.1 385780111 12422598 3339821..3340534 1 NC_017304.1 KEGG: cce:Ccel_3405 PP-loop domain protein; manually curated; PFAM: PP-loop domain protein; PP-loop domain-containing protein 3340534 12422598 Clo1313_2845 Clostridium thermocellum DSM 1313 PP-loop domain-containing protein YP_005689276.1 3339821 D 637887 CDS YP_005689277.1 385780112 12422599 3340575..3343364 1 NC_017304.1 PFAM: Ig domain protein group 2 domain protein; KEGG: cce:Ccel_3406 Ig-like, group 2; Ig domain-containing protein 3343364 12422599 Clo1313_2846 Clostridium thermocellum DSM 1313 Ig domain-containing protein YP_005689277.1 3340575 D 637887 CDS YP_005689278.1 385780113 12422600 complement(3343572..3344441) 1 NC_017304.1 manually curated; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: cce:Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 3344441 12422600 Clo1313_2847 Clostridium thermocellum DSM 1313 UTP-glucose-1-phosphate uridylyltransferase YP_005689278.1 3343572 R 637887 CDS YP_005689279.1 385780114 12422602 3344663..3345493 1 NC_017304.1 KEGG: pjd:Pjdr2_5284 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN 3345493 12422602 Clo1313_2848 Clostridium thermocellum DSM 1313 ribonuclease BN YP_005689279.1 3344663 D 637887 CDS YP_005689280.1 385780115 12422603 complement(3345563..3345847) 1 NC_017304.1 KEGG: cce:Ccel_0075 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 3345847 12422603 Clo1313_2849 Clostridium thermocellum DSM 1313 30S ribosomal protein S18 YP_005689280.1 3345563 R 637887 CDS YP_005689281.1 385780116 12422604 complement(3345913..3346329) 1 NC_017304.1 KEGG: cce:Ccel_0056 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 3346329 12422604 Clo1313_2850 Clostridium thermocellum DSM 1313 single-strand binding protein YP_005689281.1 3345913 R 637887 CDS YP_005689282.1 385780117 12422606 complement(3346339..3346626) 1 NC_017304.1 KEGG: cce:Ccel_0055 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 3346626 12422606 Clo1313_2851 Clostridium thermocellum DSM 1313 30S ribosomal protein S6 YP_005689282.1 3346339 R 637887 CDS YP_005689283.1 385780118 12422607 3347224..3348471 1 NC_017304.1 KEGG: hya:HY04AAS1_1171 diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein; manually curated; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein; GAF sensor-containing diguanylate cyclase 3348471 12422607 Clo1313_2852 Clostridium thermocellum DSM 1313 GAF sensor-containing diguanylate cyclase YP_005689283.1 3347224 D 637887 CDS YP_005689284.1 385780119 12422609 complement(3348443..3349624) 1 NC_017304.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: dth:DICTH_1953 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 3349624 12422609 Clo1313_2853 Clostridium thermocellum DSM 1313 N-acetylglucosamine-6-phosphate deacetylase YP_005689284.1 3348443 R 637887 CDS YP_005689285.1 385780120 12422610 3349919..3352132 1 NC_017304.1 SMART: alpha amylase catalytic sub domain; manually curated; KEGG: cce:Ccel_0053 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; 1,4-alpha-glucan-branching protein 3352132 12422610 Clo1313_2854 Clostridium thermocellum DSM 1313 1,4-alpha-glucan-branching protein YP_005689285.1 3349919 D 637887 CDS YP_005689286.1 385780121 12422611 3352432..3353022 1 NC_017304.1 KEGG: bhy:BHWA1_01521 hypothetical protein; hypothetical protein 3353022 12422611 Clo1313_2855 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689286.1 3352432 D 637887 CDS YP_005689287.1 385780122 12422612 complement(3353463..3356309) 1 NC_017304.1 KEGG: chu:CHU_2399 hypothetical protein; PFAM: Carbohydrate binding family 6; Dockerin type 1; glycoside hydrolase family 5; SMART: Fibronectin type III domain protein; carbohydrate binding family protein 3356309 12422612 Clo1313_2856 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005689287.1 3353463 R 637887 CDS YP_005689288.1 385780123 12422613 complement(3356382..3358565) 1 NC_017304.1 KEGG: cce:Ccel_1233 carbohydrate binding family 6; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV; glycoside hydrolase 3358565 12422613 Clo1313_2857 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689288.1 3356382 R 637887 CDS YP_005689289.1 385780124 12422614 complement(3358667..3360178) 1 NC_017304.1 KEGG: cce:Ccel_1232 carbohydrate binding family 6; PFAM: Carbohydrate binding family 6; Dockerin type 1; esterase; SMART: cellulose binding type IV; carbohydrate binding family protein 3360178 12422614 Clo1313_2858 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005689289.1 3358667 R 637887 CDS YP_005689290.1 385780125 12422615 complement(3360300..3363197) 1 NC_017304.1 KEGG: cce:Ccel_1656 carbohydrate binding family 6; PFAM: Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV; Parallel beta-helix repeat; carbohydrate binding family protein 3363197 12422615 Clo1313_2859 Clostridium thermocellum DSM 1313 carbohydrate binding family protein YP_005689290.1 3360300 R 637887 CDS YP_005689291.1 385780126 12422616 complement(3363224..3364825) 1 NC_017304.1 KEGG: cce:Ccel_1231 carbohydrate binding family 6; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV; glycoside hydrolase 3364825 12422616 Clo1313_2860 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689291.1 3363224 R 637887 CDS YP_005689292.1 385780127 12422617 complement(3364842..3367901) 1 NC_017304.1 KEGG: cce:Ccel_1239 carbohydrate binding family 6; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; Carbohydrate binding family 6; Dockerin type 1; SMART: cellulose binding type IV; glycoside hydrolase 3367901 12422617 Clo1313_2861 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689292.1 3364842 R 637887 CDS YP_005689293.1 385780128 12422618 complement(3368345..3369640) 1 NC_017304.1 SMART: HNH nuclease; KEGG: fjo:Fjoh_3009 hypothetical protein; HNH nuclease 3369640 12422618 Clo1313_2862 Clostridium thermocellum DSM 1313 HNH nuclease YP_005689293.1 3368345 R 637887 CDS YP_005689294.1 385780129 12422619 complement(3369627..3371915) 1 NC_017304.1 KEGG: bcu:BCAH820_1018 hypothetical protein; hypothetical protein 3371915 12422619 Clo1313_2863 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689294.1 3369627 R 637887 CDS YP_005689295.1 385780130 12422620 complement(3372299..3373108) 1 NC_017304.1 KEGG: mla:Mlab_0010 hypothetical protein; PFAM: transcription activator effector binding; regulatory protein MerR; SMART: transcription activator effector binding; regulatory protein MerR; MerR family transcriptional regulator 3373108 12422620 Clo1313_2864 Clostridium thermocellum DSM 1313 MerR family transcriptional regulator YP_005689295.1 3372299 R 637887 CDS YP_005689296.1 385780131 12422621 complement(3373821..3375833) 1 NC_017304.1 PFAM: protein of unknown function DUF214; KEGG: aoe:Clos_2081 hypothetical protein; hypothetical protein 3375833 12422621 Clo1313_2865 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689296.1 3373821 R 637887 CDS YP_005689297.1 385780132 12422622 complement(3375826..3376593) 1 NC_017304.1 KEGG: ere:EUBREC_3078 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3376593 12422622 Clo1313_2866 Clostridium thermocellum DSM 1313 ABC transporter YP_005689297.1 3375826 R 637887 CDS YP_005689298.1 385780133 12422623 complement(3376786..3377763) 1 NC_017304.1 KEGG: aoe:Clos_2083 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3377763 12422623 Clo1313_2867 Clostridium thermocellum DSM 1313 integral membrane sensor signal transduction histidine kinase YP_005689298.1 3376786 R 637887 CDS YP_005689299.1 385780134 12422624 complement(3377765..3378436) 1 NC_017304.1 manually curated; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: dhd:Dhaf_0521 two component transcriptional regulator, winged helix family; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3378436 12422624 Clo1313_2868 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005689299.1 3377765 R 637887 CDS YP_005689300.1 385780135 12422625 complement(3378699..3378962) 1 NC_017304.1 KEGG: nvi:100124286 similar to protease m1 zinc metalloprotease; hypothetical protein 3378962 12422625 Clo1313_2869 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689300.1 3378699 R 637887 CDS YP_005689301.1 385780136 12422626 complement(3378986..3379513) 1 NC_017304.1 KEGG: cpy:Cphy_3712 hypothetical protein; hypothetical protein 3379513 12422626 Clo1313_2870 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689301.1 3378986 R 637887 CDS YP_005689302.1 385780137 12422627 complement(3379684..3380508) 1 NC_017304.1 KEGG: tet:TTHERM_00283420 Cytochrome P450 family protein; hypothetical protein 3380508 12422627 Clo1313_2871 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689302.1 3379684 R 637887 CDS YP_005689303.1 385780138 12422628 complement(3380776..3381135) 1 NC_017304.1 KEGG: tva:TVAG_228510 hypothetical protein; hypothetical protein 3381135 12422628 Clo1313_2872 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689303.1 3380776 R 637887 CDS YP_005689304.1 385780139 12422629 3381411..3382049 1 NC_017304.1 KEGG: llo:LLO_1884 transposase (DDE domain); transposase (DDE domain) 3382049 12422629 Clo1313_2873 Clostridium thermocellum DSM 1313 transposase (DDE domain) YP_005689304.1 3381411 D 637887 CDS YP_005689305.1 385780140 12422630 complement(3382051..3382701) 1 NC_017304.1 manually curated; KEGG: bfr:BF2234 putative efflux pump component protein; hypothetical protein 3382701 12422630 Clo1313_2874 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689305.1 3382051 R 637887 CDS YP_005689306.1 385780141 12422631 complement(3383048..3383785) 1 NC_017304.1 manually curated; KEGG: eat:EAT1b_1173 hypothetical protein; hypothetical protein 3383785 12422631 Clo1313_2875 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689306.1 3383048 R 637887 CDS YP_005689307.1 385780142 12422632 complement(3383863..3384426) 1 NC_017304.1 TIGRFAM: GTP cyclohydrolase I; KEGG: tpd:Teth39_0319 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I 3384426 12422632 Clo1313_2876 Clostridium thermocellum DSM 1313 GTP cyclohydrolase I YP_005689307.1 3383863 R 637887 CDS YP_005689308.1 385780143 12422633 complement(3384592..3387240) 1 NC_017304.1 KEGG: cce:Ccel_0132 cyanophycin synthetase; TIGRFAM: cyanophycin synthetase; PFAM: Mur ligase middle domain protein; RimK domain protein ATP-grasp; cytoplasmic peptidoglycan synthetase domain protein; cyanophycin synthetase 3387240 12422633 Clo1313_2877 Clostridium thermocellum DSM 1313 cyanophycin synthetase YP_005689308.1 3384592 R 637887 CDS YP_005689309.1 385780144 12422634 complement(3387268..3388089) 1 NC_017304.1 TIGRFAM: cyanophycinase; KEGG: swo:Swol_1351 cyanophycinase; PFAM: peptidase S51 dipeptidase E; cyanophycinase 3388089 12422634 Clo1313_2878 Clostridium thermocellum DSM 1313 cyanophycinase YP_005689309.1 3387268 R 637887 CDS YP_005689310.1 385780145 12422635 complement(3388195..3388491) 1 NC_017304.1 KEGG: cce:Ccel_0130 hypothetical protein; hypothetical protein 3388491 12422635 Clo1313_2879 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689310.1 3388195 R 637887 CDS YP_005689311.1 385780146 12422636 complement(3388520..3389695) 1 NC_017304.1 KEGG: swo:Swol_1352 isoaspartyl dipeptidase; TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; isoaspartyl dipeptidase 3389695 12422636 Clo1313_2880 Clostridium thermocellum DSM 1313 isoaspartyl dipeptidase YP_005689311.1 3388520 R 637887 CDS YP_005689312.1 385780147 12422637 3390044..3390679 1 NC_017304.1 manually curated; TIGRFAM: LexA repressor; KEGG: cac:CA_C1832 LexA repressor; PFAM: LexA DNA-binding domain protein; LexA family transcriptional repressor 3390679 12422637 Clo1313_2881 Clostridium thermocellum DSM 1313 LexA family transcriptional repressor YP_005689312.1 3390044 D 637887 CDS YP_005689313.1 385780148 12422638 complement(3390798..3391886) 1 NC_017304.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: cce:Ccel_0128 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 3391886 12422638 Clo1313_2882 Clostridium thermocellum DSM 1313 3-isopropylmalate dehydrogenase YP_005689313.1 3390798 R 637887 CDS YP_005689314.1 385780149 12422639 complement(3391888..3392391) 1 NC_017304.1 KEGG: cce:Ccel_0127 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 3392391 12422639 Clo1313_2883 Clostridium thermocellum DSM 1313 3-isopropylmalate dehydratase small subunit YP_005689314.1 3391888 R 637887 CDS YP_005689315.1 385780150 12422640 complement(3392447..3393706) 1 NC_017304.1 KEGG: cce:Ccel_0126 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit 3393706 12422640 Clo1313_2884 Clostridium thermocellum DSM 1313 3-isopropylmalate dehydratase large subunit YP_005689315.1 3392447 R 637887 CDS YP_005689316.1 385780151 12422641 complement(3393835..3394743) 1 NC_017304.1 KEGG: cce:Ccel_0125 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3394743 12422641 Clo1313_2885 Clostridium thermocellum DSM 1313 AraC family transcriptional regulator YP_005689316.1 3393835 R 637887 CDS YP_005689317.1 385780152 12422642 complement(3394791..3395408) 1 NC_017304.1 PFAM: Protein of unknown function DUF2179; KEGG: mem:Memar_1511 hypothetical protein; hypothetical protein 3395408 12422642 Clo1313_2886 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689317.1 3394791 R 637887 CDS YP_005689318.1 385780153 12422643 3395777..3396718 1 NC_017304.1 KEGG: cce:Ccel_0109 hypothetical protein; hypothetical protein 3396718 12422643 Clo1313_2887 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689318.1 3395777 D 637887 CDS YP_005689319.1 385780154 12422644 complement(3396715..3397662) 1 NC_017304.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: tjr:TherJR_2407 Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein 3397662 12422644 Clo1313_2888 Clostridium thermocellum DSM 1313 Mg2 transporter protein CorA family protein YP_005689319.1 3396715 R 637887 CDS YP_005689320.1 385780155 12422645 complement(3398080..3398568) 1 NC_017304.1 PFAM: FlgN family protein; KEGG: cce:Ccel_0107 FlgN family protein; FlgN family protein 3398568 12422645 Clo1313_2889 Clostridium thermocellum DSM 1313 FlgN family protein YP_005689320.1 3398080 R 637887 CDS YP_005689321.1 385780156 12422646 complement(3398579..3398983) 1 NC_017304.1 KEGG: cce:Ccel_0106 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS 3398983 12422646 Clo1313_2890 Clostridium thermocellum DSM 1313 flagellar protein FliS YP_005689321.1 3398579 R 637887 CDS YP_005689322.1 385780157 12422647 complement(3399048..3401564) 1 NC_017304.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: cce:Ccel_0105 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein 3401564 12422647 Clo1313_2891 Clostridium thermocellum DSM 1313 flagellar hook-associated 2 domain-containing protein YP_005689322.1 3399048 R 637887 CDS YP_005689323.1 385780158 12422648 complement(3401570..3401965) 1 NC_017304.1 PFAM: flagellar protein FlaG protein; KEGG: cce:Ccel_0104 flagellar protein FlaG protein; flagellar protein FlaG protein 3401965 12422648 Clo1313_2892 Clostridium thermocellum DSM 1313 flagellar protein FlaG protein YP_005689323.1 3401570 R 637887 CDS YP_005689324.1 385780159 12422649 complement(3402029..3402973) 1 NC_017304.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tmt:Tmath_0714 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3402973 12422649 Clo1313_2893 Clostridium thermocellum DSM 1313 NAD-dependent epimerase/dehydratase YP_005689324.1 3402029 R 637887 CDS YP_005689325.1 385780160 12422650 complement(3402989..3404158) 1 NC_017304.1 TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; KEGG: tmt:Tmath_0715 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 3404158 12422650 Clo1313_2894 Clostridium thermocellum DSM 1313 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase YP_005689325.1 3402989 R 637887 CDS YP_005689326.1 385780161 12422651 complement(3404217..3405281) 1 NC_017304.1 KEGG: tmt:Tmath_0719 pseudaminic acid biosynthesis-associated protein PseG; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; PFAM: Glycosyltransferase 28 domain; pseudaminic acid biosynthesis-associated protein PseG 3405281 12422651 Clo1313_2895 Clostridium thermocellum DSM 1313 pseudaminic acid biosynthesis-associated protein PseG YP_005689326.1 3404217 R 637887 CDS YP_005689327.1 385780162 12422652 complement(3405291..3405974) 1 NC_017304.1 PFAM: LmbE family protein; KEGG: swo:Swol_0211 putative LmbE-like protein; LmbE family protein 3405974 12422652 Clo1313_2896 Clostridium thermocellum DSM 1313 LmbE family protein YP_005689327.1 3405291 R 637887 CDS YP_005689328.1 385780163 12422653 complement(3405967..3406701) 1 NC_017304.1 KEGG: gfo:GFO_2018 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 3406701 12422653 Clo1313_2897 Clostridium thermocellum DSM 1313 methionyl-tRNA formyltransferase YP_005689328.1 3405967 R 637887 CDS YP_005689329.1 385780164 12422654 complement(3406686..3407096) 1 NC_017304.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cac:CA_C2192 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase 3407096 12422654 Clo1313_2898 Clostridium thermocellum DSM 1313 Glyoxalase/bleomycin resistance protein/dioxygenase YP_005689329.1 3406686 R 637887 CDS YP_005689330.1 385780165 12422655 complement(3407093..3408739) 1 NC_017304.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: cac:CA_C3312 hypothetical protein; FkbH-like protein 3408739 12422655 Clo1313_2899 Clostridium thermocellum DSM 1313 FkbH-like protein YP_005689330.1 3407093 R 637887 CDS YP_005689331.1 385780166 12422656 complement(3408745..3408960) 1 NC_017304.1 PFAM: phosphopantetheine-binding; KEGG: cac:CA_C3313 acyl carrier protein, ACP; phosphopantetheine-binding protein 3408960 12422656 Clo1313_2900 Clostridium thermocellum DSM 1313 phosphopantetheine-binding protein YP_005689331.1 3408745 R 637887 CDS YP_005689332.1 385780167 12422657 complement(3408966..3409577) 1 NC_017304.1 TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; KEGG: gfo:GFO_2021 GNAT family acetyltransferase; pseudaminic acid biosynthesis N-acetyl transferase 3409577 12422657 Clo1313_2901 Clostridium thermocellum DSM 1313 pseudaminic acid biosynthesis N-acetyl transferase YP_005689332.1 3408966 R 637887 CDS YP_005689333.1 385780168 12422658 complement(3409559..3410611) 1 NC_017304.1 SMART: SAF domain protein; TIGRFAM: pseudaminic acid synthase; KEGG: cbi:CLJ_B2947 sialic acid synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; pseudaminic acid synthase 3410611 12422658 Clo1313_2902 Clostridium thermocellum DSM 1313 pseudaminic acid synthase YP_005689333.1 3409559 R 637887 CDS YP_005689334.1 385780169 12422659 complement(3410669..3411409) 1 NC_017304.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: tmt:Tmath_0716 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 3411409 12422659 Clo1313_2903 Clostridium thermocellum DSM 1313 acylneuraminate cytidylyltransferase YP_005689334.1 3410669 R 637887 CDS YP_005689335.1 385780170 12422660 complement(3411441..3412085) 1 NC_017304.1 KEGG: chu:CHU_2762 methyltransferase; TIGRFAM: pseudaminic acid biosynthesis-associated methylase; PFAM: Methyltransferase type 11; pseudaminic acid biosynthesis-associated methylase 3412085 12422660 Clo1313_2904 Clostridium thermocellum DSM 1313 pseudaminic acid biosynthesis-associated methylase YP_005689335.1 3411441 R 637887 CDS YP_005689336.1 385780171 12422661 complement(3412212..3413210) 1 NC_017304.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: cbl:CLK_2110 exopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 3413210 12422661 Clo1313_2905 Clostridium thermocellum DSM 1313 polysaccharide biosynthesis protein CapD YP_005689336.1 3412212 R 637887 CDS YP_005689337.1 385780172 12422662 complement(3413197..3414609) 1 NC_017304.1 PFAM: protein of unknown function DUF115; KEGG: tjr:TherJR_2788 protein of unknown function DUF115; hypothetical protein 3414609 12422662 Clo1313_2906 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689337.1 3413197 R 637887 CDS YP_005689338.1 385780173 12422663 complement(3414590..3414973) 1 NC_017304.1 KEGG: cbt:CLH_0788 hypothetical protein; hypothetical protein 3414973 12422663 Clo1313_2907 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689338.1 3414590 R 637887 CDS YP_005689339.1 385780174 12422664 complement(3414955..3416859) 1 NC_017304.1 PFAM: protein of unknown function DUF115; KEGG: aoe:Clos_2517 hypothetical protein; hypothetical protein 3416859 12422664 Clo1313_2908 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689339.1 3414955 R 637887 CDS YP_005689340.1 385780175 12422665 complement(3416965..3417783) 1 NC_017304.1 PFAM: flagellin domain protein; KEGG: cbt:CLH_0786 flagellin; flagellin domain-containing protein 3417783 12422665 Clo1313_2909 Clostridium thermocellum DSM 1313 flagellin domain-containing protein YP_005689340.1 3416965 R 637887 CDS YP_005689341.1 385780176 12422666 complement(3417856..3418677) 1 NC_017304.1 PFAM: flagellin domain protein; KEGG: aoe:Clos_2518 flagellin domain-containing protein; flagellin domain-containing protein 3418677 12422666 Clo1313_2910 Clostridium thermocellum DSM 1313 flagellin domain-containing protein YP_005689341.1 3417856 R 637887 CDS YP_005689342.1 385780177 12422667 complement(3418895..3420313) 1 NC_017304.1 PFAM: Aldehyde Dehydrogenase; KEGG: ckr:CKR_1943 hypothetical protein; aldehyde dehydrogenase 3420313 12422667 Clo1313_2911 Clostridium thermocellum DSM 1313 aldehyde dehydrogenase YP_005689342.1 3418895 R 637887 CDS YP_005689343.1 385780178 12422668 complement(3420525..3420752) 1 NC_017304.1 KEGG: cce:Ccel_0099 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator CsrA 3420752 12422668 Clo1313_2912 Clostridium thermocellum DSM 1313 carbon storage regulator CsrA YP_005689343.1 3420525 R 637887 CDS YP_005689344.1 385780179 12422669 complement(3420724..3421203) 1 NC_017304.1 PFAM: protein of unknown function DUF180; KEGG: cce:Ccel_0098 flagellar assembly protein FliW; hypothetical protein 3421203 12422669 Clo1313_2913 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689344.1 3420724 R 637887 CDS YP_005689345.1 385780180 12422670 complement(3421233..3421811) 1 NC_017304.1 KEGG: cce:Ccel_0097 hypothetical protein; hypothetical protein 3421811 12422670 Clo1313_2914 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689345.1 3421233 R 637887 CDS YP_005689346.1 385780181 12422671 complement(3421855..3422763) 1 NC_017304.1 KEGG: cce:Ccel_0096 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 3422763 12422671 Clo1313_2915 Clostridium thermocellum DSM 1313 flagellar hook-associated protein 3 YP_005689346.1 3421855 R 637887 CDS YP_005689347.1 385780182 12422672 complement(3422804..3424363) 1 NC_017304.1 KEGG: cce:Ccel_0095 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 3424363 12422672 Clo1313_2916 Clostridium thermocellum DSM 1313 flagellar hook-associated protein FlgK YP_005689347.1 3422804 R 637887 CDS YP_005689348.1 385780183 12422673 complement(3424370..3425839) 1 NC_017304.1 KEGG: cce:Ccel_0094 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 3425839 12422673 Clo1313_2917 Clostridium thermocellum DSM 1313 flagellar hook-associated protein FlgK YP_005689348.1 3424370 R 637887 CDS YP_005689349.1 385780184 12422674 complement(3425859..3426359) 1 NC_017304.1 PFAM: FlgN family protein; KEGG: cce:Ccel_0093 FlgN family protein; FlgN family protein 3426359 12422674 Clo1313_2918 Clostridium thermocellum DSM 1313 FlgN family protein YP_005689349.1 3425859 R 637887 CDS YP_005689350.1 385780185 12422675 complement(3426473..3426766) 1 NC_017304.1 KEGG: cce:Ccel_0092 anti-sigma-28 factor FlgM family protein; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein; anti-sigma-28 factor FlgM family protein 3426766 12422675 Clo1313_2919 Clostridium thermocellum DSM 1313 anti-sigma-28 factor FlgM family protein YP_005689350.1 3426473 R 637887 CDS YP_005689351.1 385780186 12422676 complement(3426999..3427442) 1 NC_017304.1 KEGG: cce:Ccel_0091 regulatory protein, MerR; regulatory protein MerR 3427442 12422676 Clo1313_2920 Clostridium thermocellum DSM 1313 regulatory protein MerR YP_005689351.1 3426999 R 637887 CDS YP_005689352.1 385780187 12422677 complement(3427547..3428209) 1 NC_017304.1 PFAM: phosphoribosyltransferase; KEGG: cce:Ccel_0090 phosphoribosyltransferase; phosphoribosyltransferase 3428209 12422677 Clo1313_2921 Clostridium thermocellum DSM 1313 phosphoribosyltransferase YP_005689352.1 3427547 R 637887 CDS YP_005689353.1 385780188 12422678 complement(3428203..3430434) 1 NC_017304.1 TIGRFAM: helicase, RecD/TraA family; KEGG: tit:Thit_0465 helicase, RecD/TraA family; SMART: AAA ATPase; recombinase D 3430434 12422678 Clo1313_2922 Clostridium thermocellum DSM 1313 recombinase D YP_005689353.1 3428203 R 637887 CDS YP_005689354.1 385780189 12422679 complement(3430527..3430931) 1 NC_017304.1 KEGG: cce:Ccel_0088 hypothetical protein; hypothetical protein 3430931 12422679 Clo1313_2923 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689354.1 3430527 R 637887 CDS YP_005689355.1 385780190 12422680 complement(3431187..3432380) 1 NC_017304.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: cce:Ccel_0087 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 3432380 12422680 Clo1313_2924 Clostridium thermocellum DSM 1313 S-adenosylmethionine synthetase YP_005689355.1 3431187 R 637887 CDS YP_005689356.1 385780191 12422681 complement(3432731..3433135) 1 NC_017304.1 KEGG: amt:Amet_0908 thioesterase family protein; thioesterase family protein 3433135 12422681 Clo1313_2925 Clostridium thermocellum DSM 1313 thioesterase family protein YP_005689356.1 3432731 R 637887 CDS YP_005689357.1 385780192 12422682 complement(3433303..3435102) 1 NC_017304.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: cce:Ccel_0085 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41; ATP-dependent metalloprotease FtsH 3435102 12422682 Clo1313_2926 Clostridium thermocellum DSM 1313 ATP-dependent metalloprotease FtsH YP_005689357.1 3433303 R 637887 CDS YP_005689358.1 385780193 12422683 complement(3435230..3435784) 1 NC_017304.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: cce:Ccel_0084 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 3435784 12422683 Clo1313_2927 Clostridium thermocellum DSM 1313 hypoxanthine phosphoribosyltransferase YP_005689358.1 3435230 R 637887 CDS YP_005689359.1 385780194 12422684 complement(3435938..3437350) 1 NC_017304.1 KEGG: tte:TTE2395 ATPase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; tRNA(Ile)-lysidine synthetase 3437350 12422684 Clo1313_2928 Clostridium thermocellum DSM 1313 tRNA(Ile)-lysidine synthetase YP_005689359.1 3435938 R 637887 CDS YP_005689360.1 385780195 12422685 complement(3437366..3438703) 1 NC_017304.1 KEGG: cce:Ccel_0082 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; replicative DNA helicase 3438703 12422685 Clo1313_2929 Clostridium thermocellum DSM 1313 replicative DNA helicase YP_005689360.1 3437366 R 637887 CDS YP_005689361.1 385780196 12422686 complement(3438757..3439203) 1 NC_017304.1 KEGG: cce:Ccel_0081 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 3439203 12422686 Clo1313_2930 Clostridium thermocellum DSM 1313 50S ribosomal protein L9 YP_005689361.1 3438757 R 637887 CDS YP_005689362.1 385780197 12422687 complement(3439250..3441259) 1 NC_017304.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cce:Ccel_0080 phosphoesterase RecJ domain protein; phosphoesterase RecJ domain-containing protein 3441259 12422687 Clo1313_2931 Clostridium thermocellum DSM 1313 phosphoesterase RecJ domain-containing protein YP_005689362.1 3439250 R 637887 CDS YP_005689363.1 385780198 12422688 complement(3441285..3441626) 1 NC_017304.1 KEGG: cce:Ccel_0079 hypothetical protein; hypothetical protein 3441626 12422688 Clo1313_2932 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689363.1 3441285 R 637887 CDS YP_005689364.1 385780199 12422689 complement(3441758..3442594) 1 NC_017304.1 KEGG: cce:Ccel_0078 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; prephenate dehydratase 3442594 12422689 Clo1313_2933 Clostridium thermocellum DSM 1313 prephenate dehydratase YP_005689364.1 3441758 R 637887 CDS YP_005689365.1 385780200 12422690 3442979..3443305 1 NC_017304.1 KEGG: tit:Thit_2339 hypothetical protein; hypothetical protein 3443305 12422690 Clo1313_2934 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689365.1 3442979 D 637887 CDS YP_005689366.1 385780201 12422691 3443292..3445247 1 NC_017304.1 PFAM: V-type ATPase 116 kDa subunit; KEGG: tmt:Tmath_2248 V-type ATPase 116 kDa subunit; V-type ATPase 116 kDa subunit 3445247 12422691 Clo1313_2935 Clostridium thermocellum DSM 1313 V-type ATPase 116 kDa subunit YP_005689366.1 3443292 D 637887 CDS YP_005689367.1 385780202 12422692 3445264..3445731 1 NC_017304.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: cdl:CDR20291_2793 V-type ATP synthase subunit K; H+transporting two-sector ATPase subunit C 3445731 12422692 Clo1313_2936 Clostridium thermocellum DSM 1313 H+transporting two-sector ATPase subunit C YP_005689367.1 3445264 D 637887 CDS YP_005689368.1 385780203 12422693 3445758..3446354 1 NC_017304.1 PFAM: H+transporting two-sector ATPase E subunit; KEGG: tpd:Teth39_2262 H+-transporting two-sector ATPase, E subunit; H+transporting two-sector ATPase E subunit 3446354 12422693 Clo1313_2937 Clostridium thermocellum DSM 1313 H+transporting two-sector ATPase E subunit YP_005689368.1 3445758 D 637887 CDS YP_005689369.1 385780204 12422694 3446392..3447411 1 NC_017304.1 PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: cbk:CLL_A2863 V-type ATP synthase subunit C; H+transporting two-sector ATPase C (AC39) subunit 3447411 12422694 Clo1313_2938 Clostridium thermocellum DSM 1313 H+transporting two-sector ATPase C (AC39) subunit YP_005689369.1 3446392 D 637887 CDS YP_005689370.1 385780205 12422695 3447404..3447724 1 NC_017304.1 PFAM: Vacuolar H+transporting two-sector ATPase F subunit; KEGG: cby:CLM_2990 V-type ATP synthase subunit F; Vacuolar H+transporting two-sector ATPase F subunit 3447724 12422695 Clo1313_2939 Clostridium thermocellum DSM 1313 Vacuolar H+transporting two-sector ATPase F subunit YP_005689370.1 3447404 D 637887 CDS YP_005689371.1 385780206 12422696 3447807..3449597 1 NC_017304.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: tit:Thit_2333 ATP synthase, A subunit; H+transporting two-sector ATPase subunit alpha/beta 3449597 12422696 Clo1313_2940 Clostridium thermocellum DSM 1313 H+transporting two-sector ATPase subunit alpha/beta YP_005689371.1 3447807 D 637887 CDS YP_005689372.1 385780207 12422697 3449599..3450981 1 NC_017304.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cdl:CDR20291_2788 V-type ATP synthase subunit B; H+transporting two-sector ATPase subunit alpha/beta 3450981 12422697 Clo1313_2941 Clostridium thermocellum DSM 1313 H+transporting two-sector ATPase subunit alpha/beta YP_005689372.1 3449599 D 637887 CDS YP_005689373.1 385780208 12422698 3451079..3451747 1 NC_017304.1 KEGG: cdl:CDR20291_2787 V-type ATP synthase subunit D; TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; V-type ATPase subunit D 3451747 12422698 Clo1313_2942 Clostridium thermocellum DSM 1313 V-type ATPase subunit D YP_005689373.1 3451079 D 637887 CDS YP_005689374.1 385780209 12422699 complement(3451805..3453427) 1 NC_017304.1 KEGG: ckr:CKR_2049 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3453427 12422699 Clo1313_2943 Clostridium thermocellum DSM 1313 ABC transporter YP_005689374.1 3451805 R 637887 CDS YP_005689375.1 385780210 12422700 complement(3453770..3454306) 1 NC_017304.1 PFAM: Dockerin type 1; KEGG: cce:Ccel_0931 glycoside hydrolase family 10; Dockerin type 1 3454306 12422700 Clo1313_2944 Clostridium thermocellum DSM 1313 Dockerin type 1 YP_005689375.1 3453770 R 637887 CDS YP_005689376.1 385780211 12422701 3454736..3455650 1 NC_017304.1 KEGG: amt:Amet_1169 hypothetical protein; hypothetical protein 3455650 12422701 Clo1313_2945 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689376.1 3454736 D 637887 CDS YP_005689377.1 385780212 12422702 3455655..3456776 1 NC_017304.1 KEGG: amt:Amet_1170 hypothetical protein; hypothetical protein 3456776 12422702 Clo1313_2946 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689377.1 3455655 D 637887 CDS YP_005689378.1 385780213 12422703 complement(3457067..3457687) 1 NC_017304.1 KEGG: pfh:PFHG_04416 conserved hypothetical protein; hypothetical protein 3457687 12422703 Clo1313_2947 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689378.1 3457067 R 637887 CDS YP_005689379.1 385780214 12422705 complement(3459088..3459294) 1 NC_017304.1 KEGG: clj:CLJU_c35120 hypothetical protein; hypothetical protein 3459294 12422705 Clo1313_2949 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689379.1 3459088 R 637887 CDS YP_005689380.1 385780215 12422706 3459550..3460728 1 NC_017304.1 KEGG: amt:Amet_3170 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase 3460728 12422706 Clo1313_2950 Clostridium thermocellum DSM 1313 AAA ATPase YP_005689380.1 3459550 D 637887 CDS YP_005689381.1 385780216 12422707 complement(3460772..3461599) 1 NC_017304.1 KEGG: hor:Hore_15700 hypothetical protein; hypothetical protein 3461599 12422707 Clo1313_2951 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689381.1 3460772 R 637887 CDS YP_005689382.1 385780217 12422708 3461924..3462787 1 NC_017304.1 KEGG: cpy:Cphy_0847 amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3462787 12422708 Clo1313_2952 Clostridium thermocellum DSM 1313 family 3 extracellular solute-binding protein YP_005689382.1 3461924 D 637887 CDS YP_005689383.1 385780218 12422709 3462822..3463532 1 NC_017304.1 KEGG: ere:EUBREC_1489 amino acid ABC transporter, permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3463532 12422709 Clo1313_2953 Clostridium thermocellum DSM 1313 polar amino acid ABC transporter inner membrane subunit YP_005689383.1 3462822 D 637887 CDS YP_005689384.1 385780219 12422710 3463516..3464340 1 NC_017304.1 KEGG: amt:Amet_1675 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3464340 12422710 Clo1313_2954 Clostridium thermocellum DSM 1313 ABC transporter YP_005689384.1 3463516 D 637887 CDS YP_005689385.1 385780220 12422711 complement(3464363..3465448) 1 NC_017304.1 SMART: response regulator receiver; manually curated; KEGG: cbe:Cbei_4180 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 3465448 12422711 Clo1313_2955 Clostridium thermocellum DSM 1313 response regulator receiver modulated CheB methylesterase YP_005689385.1 3464363 R 637887 CDS YP_005689386.1 385780221 12422712 complement(3465448..3466260) 1 NC_017304.1 PFAM: MCP methyltransferase CheR-type; KEGG: cbe:Cbei_4181 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 3466260 12422712 Clo1313_2956 Clostridium thermocellum DSM 1313 chemotaxis protein CheR YP_005689386.1 3465448 R 637887 CDS YP_005689387.1 385780222 12422713 complement(3466424..3470851) 1 NC_017304.1 KEGG: cbe:Cbei_4182 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3470851 12422713 Clo1313_2957 Clostridium thermocellum DSM 1313 methyl-accepting chemotaxis sensory transducer YP_005689387.1 3466424 R 637887 CDS YP_005689388.1 385780223 12422714 complement(3470886..3472994) 1 NC_017304.1 KEGG: cbe:Cbei_4183 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; P2 response regulator binding domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; CheA signal transduction histidine kinase 3472994 12422714 Clo1313_2958 Clostridium thermocellum DSM 1313 CheA signal transduction histidine kinase YP_005689388.1 3470886 R 637887 CDS YP_005689389.1 385780224 12422715 complement(3473009..3473434) 1 NC_017304.1 KEGG: cbe:Cbei_4184 putative CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 3473434 12422715 Clo1313_2959 Clostridium thermocellum DSM 1313 CheW protein YP_005689389.1 3473009 R 637887 CDS YP_005689390.1 385780225 12422717 complement(3474280..3474840) 1 NC_017304.1 PFAM: integrase family protein; KEGG: cpy:Cphy_3451 integrase family protein; integrase family protein 3474840 12422717 Clo1313_2961 Clostridium thermocellum DSM 1313 integrase family protein YP_005689390.1 3474280 R 637887 CDS YP_005689391.1 385780226 12422718 3475241..3476173 1 NC_017304.1 KEGG: cbe:Cbei_2860 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3476173 12422718 Clo1313_2962 Clostridium thermocellum DSM 1313 AraC family transcriptional regulator YP_005689391.1 3475241 D 637887 CDS YP_005689392.1 385780227 12422719 complement(3476146..3476700) 1 NC_017304.1 PFAM: PEBP family protein; KEGG: mmo:MMOB0830 putative phospholipid binding protein; PEBP family protein 3476700 12422719 Clo1313_2963 Clostridium thermocellum DSM 1313 PEBP family protein YP_005689392.1 3476146 R 637887 CDS YP_005689393.1 385780228 12422720 complement(3476850..3477569) 1 NC_017304.1 KEGG: tit:Thit_0803 hypothetical protein; hypothetical protein 3477569 12422720 Clo1313_2964 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689393.1 3476850 R 637887 CDS YP_005689394.1 385780229 12422721 complement(3477548..3478228) 1 NC_017304.1 KEGG: ate:Athe_0677 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3478228 12422721 Clo1313_2965 Clostridium thermocellum DSM 1313 ABC transporter YP_005689394.1 3477548 R 637887 CDS YP_005689395.1 385780230 12422722 complement(3478546..3479004) 1 NC_017304.1 KEGG: tmt:Tmath_0840 hypothetical protein; hypothetical protein 3479004 12422722 Clo1313_2966 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689395.1 3478546 R 637887 CDS YP_005689396.1 385780231 12422723 complement(3479021..3479560) 1 NC_017304.1 KEGG: tit:Thit_0800 hypothetical protein; hypothetical protein 3479560 12422723 Clo1313_2967 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689396.1 3479021 R 637887 CDS YP_005689397.1 385780232 12422724 complement(3479601..3479888) 1 NC_017304.1 KEGG: aoe:Clos_0981 hypothetical protein; hypothetical protein 3479888 12422724 Clo1313_2968 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689397.1 3479601 R 637887 CDS YP_005689398.1 385780233 12422725 complement(3482114..3482377) 1 NC_017304.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: gyc:GYMC61_1189 CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 3482377 12422725 Clo1313_2969 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas2 YP_005689398.1 3482114 R 637887 CDS YP_005689399.1 385780234 12422726 complement(3482391..3483383) 1 NC_017304.1 KEGG: dtu:Dtur_0619 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 3483383 12422726 Clo1313_2970 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas1 YP_005689399.1 3482391 R 637887 CDS YP_005689400.1 385780235 12422727 complement(3483397..3483903) 1 NC_017304.1 KEGG: drm:Dred_0540 CRISPR-associated Cas4 family protein; manually curated; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas4 3483903 12422727 Clo1313_2971 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas4 YP_005689400.1 3483397 R 637887 CDS YP_005689401.1 385780236 12422728 complement(3483922..3486174) 1 NC_017304.1 TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: sli:Slin_6018 CRISPR-associated helicase Cas3; SMART: helicase domain protein; DEAD-like helicase; CRISPR-associated helicase Cas3 3486174 12422728 Clo1313_2972 Clostridium thermocellum DSM 1313 CRISPR-associated helicase Cas3 YP_005689401.1 3483922 R 637887 CDS YP_005689402.1 385780237 12422729 complement(3486196..3486921) 1 NC_017304.1 KEGG: sli:Slin_6017 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5; CRISPR-associated protein Cas5 3486921 12422729 Clo1313_2973 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas5 YP_005689402.1 3486196 R 637887 CDS YP_005689403.1 385780238 12422730 complement(3486940..3487824) 1 NC_017304.1 TIGRFAM: CRISPR-associated regulatory protein, DevR family; CRISPR-associated autoregulator DevR family; KEGG: sli:Slin_6016 CRISPR-associated autoregulator, DevR family; DevR family CRISPR-associated autoregulator 3487824 12422730 Clo1313_2974 Clostridium thermocellum DSM 1313 DevR family CRISPR-associated autoregulator YP_005689403.1 3486940 R 637887 CDS YP_005689404.1 385780239 12422731 complement(3487830..3489506) 1 NC_017304.1 manually curated; KEGG: sli:Slin_6015 hypothetical protein; hypothetical protein 3489506 12422731 Clo1313_2975 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689404.1 3487830 R 637887 CDS YP_005689405.1 385780240 12422732 complement(3489518..3490240) 1 NC_017304.1 KEGG: tye:THEYE_A1087 CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; CRISPR-associated protein Cas6 3490240 12422732 Clo1313_2976 Clostridium thermocellum DSM 1313 CRISPR-associated protein Cas6 YP_005689405.1 3489518 R 637887 CDS YP_005689406.1 385780241 12422733 3490497..3491417 1 NC_017304.1 KEGG: pjd:Pjdr2_4679 hypothetical protein; hypothetical protein 3491417 12422733 Clo1313_2977 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689406.1 3490497 D 637887 CDS YP_005689407.1 385780242 12422734 complement(3491447..3492265) 1 NC_017304.1 KEGG: cac:CA_C0501 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 3492265 12422734 Clo1313_2978 Clostridium thermocellum DSM 1313 undecaprenol kinase YP_005689407.1 3491447 R 637887 CDS YP_005689408.1 385780243 12422735 complement(3492400..3493809) 1 NC_017304.1 KEGG: cpo:COPRO5265_0068 Na+-driven multidrug efflux pump; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 3493809 12422735 Clo1313_2979 Clostridium thermocellum DSM 1313 MATE efflux family protein YP_005689408.1 3492400 R 637887 CDS YP_005689409.1 385780244 12422736 3494068..3494490 1 NC_017304.1 KEGG: nth:Nther_0635 hemerythrin-like metal-binding protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 3494490 12422736 Clo1313_2980 Clostridium thermocellum DSM 1313 hemerythrin-like metal-binding protein YP_005689409.1 3494068 D 637887 CDS YP_005689410.1 385780245 12422737 3494487..3494951 1 NC_017304.1 PFAM: CheC domain protein; KEGG: nth:Nther_0634 CheC domain protein; chemotaxis protein CheC 3494951 12422737 Clo1313_2981 Clostridium thermocellum DSM 1313 chemotaxis protein CheC YP_005689410.1 3494487 D 637887 CDS YP_005689411.1 385780246 12422738 complement(3495038..3495811) 1 NC_017304.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cac:CA_C1665 amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3495811 12422738 Clo1313_2982 Clostridium thermocellum DSM 1313 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_005689411.1 3495038 R 637887 CDS YP_005689412.1 385780247 12422739 3496130..3496858 1 NC_017304.1 PFAM: copper amine oxidase-like domain-containing protein; KEGG: bpf:BpOF4_12165 hypothetical protein; copper amine oxidase-like domain-containing protein 3496858 12422739 Clo1313_2983 Clostridium thermocellum DSM 1313 copper amine oxidase-like domain-containing protein YP_005689412.1 3496130 D 637887 CDS YP_005689413.1 385780248 12422741 complement(3497911..3498630) 1 NC_017304.1 KEGG: cac:CA_C0859 putative anti-SigV factor; hypothetical protein 3498630 12422741 Clo1313_2984 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689413.1 3497911 R 637887 CDS YP_005689414.1 385780249 12422742 complement(3498774..3499253) 1 NC_017304.1 PFAM: FMN-binding domain protein; KEGG: dhd:Dhaf_1503 hypothetical protein; FMN-binding domain-containing protein 3499253 12422742 Clo1313_2985 Clostridium thermocellum DSM 1313 FMN-binding domain-containing protein YP_005689414.1 3498774 R 637887 CDS YP_005689415.1 385780250 12422743 complement(3499394..3500149) 1 NC_017304.1 PFAM: protein of unknown function DUF218; KEGG: hmo:HM1_1492 hypothetical protein; hypothetical protein 3500149 12422743 Clo1313_2986 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689415.1 3499394 R 637887 CDS YP_005689416.1 385780251 12422744 complement(3500181..3500660) 1 NC_017304.1 PFAM: protein of unknown function DUF163; KEGG: cce:Ccel_3387 rRNA large subunit methyltransferase; hypothetical protein 3500660 12422744 Clo1313_2987 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689416.1 3500181 R 637887 CDS YP_005689417.1 385780252 12422745 complement(3500680..3501471) 1 NC_017304.1 KEGG: cce:Ccel_3388 beta-lactamase domain protein; beta-lactamase 3501471 12422745 Clo1313_2988 Clostridium thermocellum DSM 1313 beta-lactamase YP_005689417.1 3500680 R 637887 CDS YP_005689418.1 385780253 12422746 complement(3501501..3502754) 1 NC_017304.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: cce:Ccel_3389 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3502754 12422746 Clo1313_2989 Clostridium thermocellum DSM 1313 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005689418.1 3501501 R 637887 CDS YP_005689419.1 385780254 12422747 complement(3502892..3503728) 1 NC_017304.1 PFAM: Protein of unknown function YycH; KEGG: cce:Ccel_3390 hypothetical protein; hypothetical protein 3503728 12422747 Clo1313_2990 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689419.1 3502892 R 637887 CDS YP_005689420.1 385780255 12422748 complement(3503734..3505200) 1 NC_017304.1 KEGG: cce:Ccel_3391 hypothetical protein; hypothetical protein 3505200 12422748 Clo1313_2991 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689420.1 3503734 R 637887 CDS YP_005689421.1 385780256 12422750 complement(3505216..3505746) 1 NC_017304.1 KEGG: cce:Ccel_3392 hypothetical protein; hypothetical protein 3505746 12422750 Clo1313_2992 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689421.1 3505216 R 637887 CDS YP_005689422.1 385780257 12422751 complement(3505858..3507660) 1 NC_017304.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: cce:Ccel_3393 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; multi-sensor signal transduction histidine kinase 3507660 12422751 Clo1313_2993 Clostridium thermocellum DSM 1313 multi-sensor signal transduction histidine kinase YP_005689422.1 3505858 R 637887 CDS YP_005689423.1 385780258 12422752 complement(3507716..3508414) 1 NC_017304.1 KEGG: cce:Ccel_3394 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3508414 12422752 Clo1313_2994 Clostridium thermocellum DSM 1313 winged helix family two component transcriptional regulator YP_005689423.1 3507716 R 637887 CDS YP_005689424.1 385780259 12422753 complement(3508411..3508623) 1 NC_017304.1 KEGG: mga:MGA_0553 hypothetical protein; hypothetical protein 3508623 12422753 Clo1313_2995 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689424.1 3508411 R 637887 CDS YP_005689425.1 385780260 12422754 3508702..3508917 1 NC_017304.1 KEGG: str:Sterm_2480 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 3508917 12422754 Clo1313_2996 Clostridium thermocellum DSM 1313 TetR family transcriptional regulator YP_005689425.1 3508702 D 637887 CDS YP_005689426.1 385780261 12422755 complement(3509042..3510886) 1 NC_017304.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: amt:Amet_0277 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 3510886 12422755 Clo1313_2997 Clostridium thermocellum DSM 1313 polysaccharide biosynthesis protein CapD YP_005689426.1 3509042 R 637887 CDS YP_005689427.1 385780262 12422756 complement(3511013..3512485) 1 NC_017304.1 PFAM: polysaccharide biosynthesis protein; KEGG: fsu:Fisuc_2672 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3512485 12422756 Clo1313_2998 Clostridium thermocellum DSM 1313 polysaccharide biosynthesis protein YP_005689427.1 3511013 R 637887 CDS YP_005689428.1 385780263 12422757 complement(3512587..3513714) 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: tkm:TK90_1546 glycosyl transferase group 1; group 1 glycosyl transferase 3513714 12422757 Clo1313_2999 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005689428.1 3512587 R 637887 CDS YP_005689429.1 385780264 12422758 complement(3513692..3515005) 1 NC_017304.1 KEGG: erg:ERGA_CDS_01410 ABC transporter permease; hypothetical protein 3515005 12422758 Clo1313_3000 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689429.1 3513692 R 637887 CDS YP_005689430.1 385780265 12422759 complement(3514983..3516215) 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: pmo:Pmob_1293 glycosyl transferase group 1; group 1 glycosyl transferase 3516215 12422759 Clo1313_3001 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005689430.1 3514983 R 637887 CDS YP_005689431.1 385780266 12422760 complement(3516290..3517333) 1 NC_017304.1 PFAM: glycosyl transferase group 1; KEGG: bca:BCE_5391 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 3517333 12422760 Clo1313_3002 Clostridium thermocellum DSM 1313 group 1 glycosyl transferase YP_005689431.1 3516290 R 637887 CDS YP_005689432.1 385780267 12422761 complement(3517347..3518666) 1 NC_017304.1 KEGG: ele:Elen_1917 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 3518666 12422761 Clo1313_3003 Clostridium thermocellum DSM 1313 nucleotide sugar dehydrogenase YP_005689432.1 3517347 R 637887 CDS YP_005689433.1 385780268 12422762 complement(3518716..3519882) 1 NC_017304.1 PFAM: glycosyl transferase family 2; KEGG: apr:Apre_0245 glycosyl transferase family 2; family 2 glycosyl transferase 3519882 12422762 Clo1313_3004 Clostridium thermocellum DSM 1313 family 2 glycosyl transferase YP_005689433.1 3518716 R 637887 CDS YP_005689434.1 385780269 12422763 complement(3519947..3521005) 1 NC_017304.1 KEGG: pth:PTH_1099 hypothetical protein; hypothetical protein 3521005 12422763 Clo1313_3005 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689434.1 3519947 R 637887 CDS YP_005689435.1 385780270 12422764 complement(3521016..3521474) 1 NC_017304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hya:HY04AAS1_0683 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3521474 12422764 Clo1313_3006 Clostridium thermocellum DSM 1313 N-acetyltransferase GCN5 YP_005689435.1 3521016 R 637887 CDS YP_005689436.1 385780271 12422765 complement(3521449..3522147) 1 NC_017304.1 KEGG: drm:Dred_3047 sugar transferase; PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 3522147 12422765 Clo1313_3007 Clostridium thermocellum DSM 1313 undecaprenyl-phosphate galactose phosphotransferase YP_005689436.1 3521449 R 637887 CDS YP_005689437.1 385780272 12422766 complement(3522149..3523297) 1 NC_017304.1 KEGG: aco:Amico_1716 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 3523297 12422766 Clo1313_3008 Clostridium thermocellum DSM 1313 glutamine--scyllo-inositol transaminase YP_005689437.1 3522149 R 637887 CDS YP_005689438.1 385780273 12422767 complement(3523356..3526385) 1 NC_017304.1 KEGG: tit:Thit_0635 O-antigen polymerase; PFAM: O-antigen polymerase; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; O-antigen polymerase 3526385 12422767 Clo1313_3009 Clostridium thermocellum DSM 1313 O-antigen polymerase YP_005689438.1 3523356 R 637887 CDS YP_005689439.1 385780274 12422768 complement(3526427..3527707) 1 NC_017304.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: amt:Amet_0192 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 3527707 12422768 Clo1313_3010 Clostridium thermocellum DSM 1313 lipopolysaccharide biosynthesis protein YP_005689439.1 3526427 R 637887 CDS YP_005689440.1 385780275 12422769 complement(3527950..3531057) 1 NC_017304.1 PFAM: Ig domain protein; S-layer domain-containing protein; KEGG: cce:Ccel_3398 hypothetical protein; Ig domain-containing protein 3531057 12422769 Clo1313_3011 Clostridium thermocellum DSM 1313 Ig domain-containing protein YP_005689440.1 3527950 R 637887 CDS YP_005689441.1 385780276 12422770 complement(3531445..3531615) 1 NC_017304.1 KEGG: csc:Csac_2334 hypothetical protein; hypothetical protein 3531615 12422770 Clo1313_3012 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689441.1 3531445 R 637887 CDS YP_005689442.1 385780277 12422771 3531901..3532344 1 NC_017304.1 PFAM: cell wall hydrolase SleB; KEGG: cno:NT01CX_1338 cell wall hydrolase; cortex lytic enzyme, putative; cell wall hydrolase SleB 3532344 12422771 Clo1313_3013 Clostridium thermocellum DSM 1313 cell wall hydrolase SleB YP_005689442.1 3531901 D 637887 CDS YP_005689443.1 385780278 12422772 3532400..3532849 1 NC_017304.1 KEGG: cbh:CLC_2819 hypothetical protein; hypothetical protein 3532849 12422772 Clo1313_3014 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689443.1 3532400 D 637887 CDS YP_005689444.1 385780279 12422773 complement(3533022..3533450) 1 NC_017304.1 KEGG: cce:Ccel_1780 putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; signal transduction protein 3533450 12422773 Clo1313_3015 Clostridium thermocellum DSM 1313 signal transduction protein YP_005689444.1 3533022 R 637887 CDS YP_005689445.1 385780280 12422774 3533675..3534823 1 NC_017304.1 PFAM: Ig domain protein group 1 domain protein; KEGG: alv:Alvin_3300 lipase, class 2; Ig domain-containing protein 3534823 12422774 Clo1313_3016 Clostridium thermocellum DSM 1313 Ig domain-containing protein YP_005689445.1 3533675 D 637887 CDS YP_005689446.1 385780281 12422775 complement(3535133..3535966) 1 NC_017304.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: cce:Ccel_3478 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 3535966 12422775 Clo1313_3017 Clostridium thermocellum DSM 1313 nicotinate-nucleotide pyrophosphorylase YP_005689446.1 3535133 R 637887 CDS YP_005689447.1 385780282 12422776 complement(3535995..3537593) 1 NC_017304.1 TIGRFAM: L-aspartate oxidase; KEGG: cce:Ccel_3479 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 3537593 12422776 Clo1313_3018 Clostridium thermocellum DSM 1313 L-aspartate oxidase YP_005689447.1 3535995 R 637887 CDS YP_005689448.1 385780283 12422777 complement(3537751..3538665) 1 NC_017304.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: cce:Ccel_3480 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 3538665 12422777 Clo1313_3019 Clostridium thermocellum DSM 1313 quinolinate synthetase complex subunit A YP_005689448.1 3537751 R 637887 CDS YP_005689449.1 385780284 12422778 3538933..3540105 1 NC_017304.1 KEGG: eel:EUBELI_00783 hypothetical protein; hypothetical protein 3540105 12422778 Clo1313_3020 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689449.1 3538933 D 637887 CDS YP_005689450.1 385780285 12422779 complement(3540149..3540802) 1 NC_017304.1 KEGG: cce:Ccel_0955 accessory gene regulator B; PFAM: Accessory gene regulator B; SMART: Accessory gene regulator B; Accessory gene regulator B 3540802 12422779 Clo1313_3021 Clostridium thermocellum DSM 1313 Accessory gene regulator B YP_005689450.1 3540149 R 637887 CDS YP_005689451.1 385780286 12422784 3546611..3547228 1 NC_017304.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cce:Ccel_1803 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 3547228 12422784 Clo1313_3022 Clostridium thermocellum DSM 1313 metal dependent phosphohydrolase YP_005689451.1 3546611 D 637887 CDS YP_005689452.1 385780287 12422785 3547721..3550564 1 NC_017304.1 PFAM: glycoside hydrolase family 9; type 3a cellulose-binding domain protein; Dockerin type 1; KEGG: cce:Ccel_1648 glycoside hydrolase family 9; glycoside hydrolase 3550564 12422785 Clo1313_3023 Clostridium thermocellum DSM 1313 glycoside hydrolase YP_005689452.1 3547721 D 637887 CDS YP_005689453.1 385780288 12422786 complement(3550731..3553214) 1 NC_017304.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: cce:Ccel_3482 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 3553214 12422786 Clo1313_3024 Clostridium thermocellum DSM 1313 DNA gyrase subunit A YP_005689453.1 3550731 R 637887 CDS YP_005689454.1 385780289 12422787 complement(3553548..3554384) 1 NC_017304.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_3483 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein 3554384 12422787 Clo1313_3025 Clostridium thermocellum DSM 1313 parB-like partition protein YP_005689454.1 3553548 R 637887 CDS YP_005689455.1 385780290 12422788 complement(3554583..3555311) 1 NC_017304.1 KEGG: cce:Ccel_3484 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 3555311 12422788 Clo1313_3026 Clostridium thermocellum DSM 1313 methyltransferase GidB YP_005689455.1 3554583 R 637887 CDS YP_005689456.1 385780291 12422790 complement(3555331..3557223) 1 NC_017304.1 KEGG: cce:Ccel_3485 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 3557223 12422790 Clo1313_3027 Clostridium thermocellum DSM 1313 glucose inhibited division protein A YP_005689456.1 3555331 R 637887 CDS YP_005689457.1 385780292 12422792 complement(3557245..3558624) 1 NC_017304.1 KEGG: cce:Ccel_3486 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE 3558624 12422792 Clo1313_3028 Clostridium thermocellum DSM 1313 tRNA modification GTPase TrmE YP_005689457.1 3557245 R 637887 CDS YP_005689458.1 385780293 12422794 complement(3558840..3559460) 1 NC_017304.1 KEGG: cce:Ccel_3487 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein; KH domain protein; single-stranded nucleic acid binding R3H domain-containing protein 3559460 12422794 Clo1313_3029 Clostridium thermocellum DSM 1313 single-stranded nucleic acid binding R3H domain-containing protein YP_005689458.1 3558840 R 637887 CDS YP_005689459.1 385780294 12422795 complement(3559461..3560336) 1 NC_017304.1 KEGG: cce:Ccel_3488 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; YidC/Oxa1 family membrane protein insertase 3560336 12422795 Clo1313_3030 Clostridium thermocellum DSM 1313 YidC/Oxa1 family membrane protein insertase YP_005689459.1 3559461 R 637887 CDS YP_005689460.1 385780295 12422796 complement(3560357..3560572) 1 NC_017304.1 PFAM: protein of unknown function DUF37; KEGG: cce:Ccel_3489 protein of unknown function DUF37; hypothetical protein 3560572 12422796 Clo1313_3031 Clostridium thermocellum DSM 1313 hypothetical protein YP_005689460.1 3560357 R 637887 CDS YP_005689461.1 385780296 12422797 complement(3560554..3560934) 1 NC_017304.1 KEGG: cce:Ccel_3490 ribonuclease P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P protein component 3560934 12422797 Clo1313_3032 Clostridium thermocellum DSM 1313 ribonuclease P protein component YP_005689461.1 3560554 R 637887 CDS YP_005689462.1 385780297 12422798 complement(3560991..3561125) 1 NC_017304.1 manually curated; TIGRFAM: ribosomal protein L34; KEGG: cce:Ccel_3491 50S ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 3561125 12422798 Clo1313_3033 Clostridium thermocellum DSM 1313 50S ribosomal protein L34 YP_005689462.1 3560991 R 637887 CDS