-- dump date 20240506_060906 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP024846.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP024846.1.REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp).REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250xREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinIONREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72 Pseudo Genes (incomplete) :: 61 of 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72 Pseudo Genes (incomplete) :: 61 of 72 Pseudo Genes (internal stop) :: 8 of 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72 Pseudo Genes (incomplete) :: 61 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 14 of 72REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72 Pseudo Genes (incomplete) :: 61 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 14 of 72 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72 Pseudo Genes (incomplete) :: 61 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 14 of 72 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP024846.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by DFAST v.1.2.0 (https://dfast.nig.ac.jp). ##Genome-Assembly-Data-START## Assembly Method :: unicycler v. 0.4.7 Genome Coverage :: 250x Sequencing Technology :: Illumina MiSeq; Oxford Nanopore MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/29/2024 06:14:17 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,421 CDSs (total) :: 3,348 Genes (coding) :: 3,276 CDSs (with protein) :: 3,276 Genes (RNA) :: 73 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 57 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 21 of 72 Pseudo Genes (incomplete) :: 61 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 14 of 72 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.