-- dump date 20240506_002432 -- class Genbank::Contig -- table contig_comment -- id comment NC_014376.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002109.1.REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. HemmeREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: CanadaREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: SludgeREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: ChemoorganotrophREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in CanadaREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: SporulatingREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37CREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted) :: 18 of 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted) :: 18 of 52 Pseudo Genes (incomplete) :: 36 of 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted) :: 18 of 52 Pseudo Genes (incomplete) :: 36 of 52 Pseudo Genes (internal stop) :: 10 of 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted) :: 18 of 52 Pseudo Genes (incomplete) :: 36 of 52 Pseudo Genes (internal stop) :: 10 of 52 Pseudo Genes (multiple problems) :: 10 of 52REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted) :: 18 of 52 Pseudo Genes (incomplete) :: 36 of 52 Pseudo Genes (internal stop) :: 10 of 52 Pseudo Genes (multiple problems) :: 10 of 52 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002109.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4086885 Source DNA and organism available from Christopher L. Hemme (hemmecl@ou.edu) Contacts: Christopher L. Hemme (hemmecl@ou.edu) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Clostridium saccharolyticum WM1, DSM 2544 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Canada environment :: Sludge num_replicons :: 1 ref_biomaterial :: ATCC 35040, NRC 2533, DSM 2544 biotic_relationship :: Free living trophic_level :: Chemoorganotroph rel_to_oxygen :: Anaerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 finishing_strategy :: Finished GOLD Stamp ID :: Gi02585 Type Strain :: Yes Greengenes ID :: 52311 Funding Program :: DOEM 2007 Isolation Site :: Sewage sludge in Canada Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Sporulating Temperature Range :: Mesophile Temperature Optimum :: 37C Gram Staining :: Gram+ Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/28/2024 11:16:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,327 CDSs (total) :: 4,237 Genes (coding) :: 4,185 CDSs (with protein) :: 4,185 Genes (RNA) :: 90 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 68 ncRNAs :: 4 Pseudo Genes (total) :: 52 CDSs (without protein) :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted) :: 18 of 52 Pseudo Genes (incomplete) :: 36 of 52 Pseudo Genes (internal stop) :: 10 of 52 Pseudo Genes (multiple problems) :: 10 of 52 ##Genome-Annotation-Data-END## COMPLETENESS: full length.