-- dump date   	20140619_044855
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
NP_149993.1	250 aa, similar to pir:I40444 Spo0A activation inhibitor soj from Bacillus subtilis (253 aa); 37% identity in 250 aa overlap; ParA family
NP_149994.1	426 aa, similar to gpu:AF300944_3 presumptive ParB protein from Lactococcus lactis subsplactis (242 aa); 30% identity in 266 aa overlap
NP_149995.1	120 aa, no significant homology
NP_149997.1	83 aa, similar to pir:T14710 probable transposase from Yersinia pestis (402 aa); 44% identity in 50 aa overlap; truncated
NP_149998.1	60 aa, similar to gp:AF143819_1 transposase-like protein from Escherichia coli (402 aa); 38% identity in 60 aa overlap; truncated
NP_149999.1	52 aa, similar to pir:T43600 probable transposase from Yersinia pestis (105 aa); 56% identity in 50 aa overlap; truncated
NP_150000.1	211 aa, similar to gp:AP001508_4 ABC transporter (ATP-binding protein) from Bacillus halodurans (213 aa); 49% identity in 214 aa overlap
NP_150001.1	720 aa, similar to gp:AP001508_3 BH0280 gene product from Bacillus halodurans (713 aa); 23% identity in 661 aa overlap
NP_150002.1	103 aa, no significant homology
NP_150003.1	77 aa, similar to probable transposase from Yersinia pestis plasmid pMT1 (402 aa); 25% identity in 158 aa overlap; truncated
NP_150004.1	79 aa, similar to probable transposase from Yersinia pestis (99 aa); 46% identity in 73 aa overlap
NP_150005.1	161 aa, similar to sp:YPI6_CLOPE HYPOTHETICAL 19.7 KDA PROTEIN (ORF6) from Clostridium perfringens plasmid pIP404 (166 aa); 25% identity in 156 aa overlap; plasmid-related
NP_150006.1	59 aa, no significant homology
NP_150007.1	224 aa, similar to gp:AP001517_204 BH3082 gene product from Bacillus halodurans (211 aa); 25% identity in 196 aa overlap
NP_150008.1	189 aa, similar to sp:RESP_CLOPE RESOLVASE (ORF8) from Clostridium perfringens plasmid pIP404 (189 aa); 92% identity in 174 aa overlap
NP_150009.1	421 aa, no significant homology
NP_150010.1	265 aa, similar to pir:JC6515 beta 2 toxin from Clostridium perfringens (265 aa); 91% identity in 265 aa overlap
NP_150011.1	214 aa, no significant homology
NP_150012.1	104 aa, similar to pir:B75335 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (107 aa); 39% identity in 101 aa overlap
NP_150013.1	74 aa, no significant homology
NP_150014.1	145 aa, similar to prf:2605291A RadC protein from Bacillus sp. (119 aa); 54% identity in 119 aa overlap
NP_150015.1	105 aa, partially similar to gp:AF225463_1 SpoIIGB from Clostridium bifermentans (107 aa); 34% identity in 73 aa overlap
NP_150016.1	107 aa, no significant homology
NP_150017.1	67 aa, no significant homology
NP_150018.1	129 aa, no significant homology
NP_150019.1	355 aa, no significant homology
NP_150020.1	65 aa, similar to pir:S75025 hypothetical protein slr1999 from Synechocystis sp. (strain PCC 6803) (136 aa); 45% identity in 53 aa overlap
NP_150021.1	138 aa, similar to pir:T13557 hypothetical protein 17 from Bacillus phage phi-105 (138 aa); 48% identity in 134 aa overlap; phage-related
NP_150022.1	252 aa, no significant homology
NP_150023.1	337 aa, similar to gp:AP001508_32 BH0309 gene product from Bacillus halodurans (338 aa); 23% identity in 343 aa overlap
NP_150024.1	156 aa, no significant homology
NP_150025.1	61 aa, similar to gp:AF179847_5 putative resolvase from Lactococcus lactis (199 aa); 38% identity in 65 aa overlap; truncated
NP_150026.1	80 aa, no significant homology
NP_150027.1	165 aa, no significant homology
NP_150028.1	453 aa, partially similar to sp:PRIM_CLOAB DNA PRIMASE (EC 2.7.7.-) from Clostridium acetobutyricum (596 aa); 21% identity in 402 aa overlap
NP_150029.1	486 aa, similar to gp:AF188935_80 pXO2-81 from Bacillus anthracis (589 aa); 28% identity in 500 aa overlap; plasmid-related
NP_150030.1	54 aa, no significant homology
NP_150031.1	72 aa, no significant homology
NP_150032.1	377 aa, similar to gp:AF188935_83 pXO2-84 from Bacillus anthracis (490 aa); 31% identity in 421 aa overlap; plasmid-related
NP_150033.1	135 aa, no significant homology
NP_150034.1	88 aa, no significant homology
NP_150035.1	67 aa, no significant homology
NP_150036.1	304 aa, similar to gp:AF188935_5 pXO2-05 from Bacillus anthracis (282 aa); 25% identity in 227 aa overlap; plasmid-related
NP_150037.1	387 aa, similar to pir:F70031 cell wall-binding protein homolog yvcE from Bacillus subtilis (473 aa); 47% identity in 168 aa overlap
NP_150038.1	229 aa, no significant homology
NP_150039.1	632 aa, similar to gp:AF188935_9 pXO2.09 from Bacillus anthracis (643 aa); 33% identity in 640 aa overlap; plasmid-related
NP_150040.1	703 aa, similar to gp:AF007787_9 type I topoisomerase from Enterococcus faecalis (714 aa); 31% identity in 742 aa overlap
NP_150041.1	214 aa, similar to gp:AF188935_10 pXO2-10 from Bacillus anthracis (222 aa); 23% identity in 222 aa overlap; plasmid-related
NP_150042.1	93 aa, no significant homology
NP_150043.1	709 aa, similar to gp:AF188935_14 pXO2-14 from Bacillus anthracis (952 aa); 21% identity in 798 aa overlap; plasmid-related
NP_150044.1	913 aa, similar to gp:AF188935_16 pXO2-16 from Bacillus anthracis (611 aa); 35% identity in 650 aa overlap; plasmid-related
NP_150045.1	70 aa, no significant homology
NP_150046.1	78 aa, no significant homology
NP_150047.1	64 aa, no significant homology
NP_150048.1	152 aa, partially similar to gp:CBE288947_2 Spo0A protein from Clostridium beijerinckii (273 aa); 28% identity in 112 aa overlap
NP_150049.1	198 aa, similar to gp:AP001514_133 BH2127 gene product from Bacillus halodurans (194 aa); 29% identity in 174 aa overlap
NP_150050.1	1368 aa, similar to gp:AP001514_20 BH2014 gene product from Bacillus halodurans (1816 aa); 30% identity in 718 aa overlap. Also similar to pir:A42404 collagen adhesin from Staphylococcus aureus (1185 aa); 23% identity in 813 aa overlap
NP_150051.1	116 aa, similar to gp:SASIGFACB_1 ORF1 gene product from Staphylococcus aureus (120 aa); 41% identity in 112 aa overlap
NP_150052.1	357 aa, similar to pir:A81049 TonB protein NMB1730 from Neisseria meningitidis (280 aa); 38% identity in 120 aa overlap
NP_150053.1	161 aa, no significant homology
NP_150054.1	367 aa, similar to pir:D69944 transcription regulator phage-related homolog yqaE from Bacillus subtilis (116 aa); 37% identity in 109 aa overlap
NP_150055.1	148 aa, no significant homology
NP_150056.1	216 aa, no significant homology
NP_560917.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
NP_560918.1	binds the polymerase to DNA and acts as a sliding clamp
NP_560919.1	similar to pir|H75402 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (104 aa); % identity in 57 aa overlap
NP_560920.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
NP_560921.1	similar to pir:T46554 hypothetical protein X from Clostridium acetobutylicum (87 aa); 78.6% identity in 84 aa overlap
NP_560922.1	negatively supercoils closed circular double-stranded DNA
NP_560923.1	negatively supercoils closed circular double-stranded DNA
NP_560924.1	no significant homology.
NP_560925.1	no significant homology.
NP_560926.1	no significant homology. ATT start
NP_560927.1	similar to pir:D69427 conserved hypothetical protein AF1421 from Archaeoglobus fulgidus (880 aa); 31.7% identity in 881 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_560928.1	similar to pir:E72254 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (479 aa); 31.4% identity in 455 aa overlap.  N-terminal signal sequence was found by PSORT
NP_560929.1	no significant homology.
NP_560930.2	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_560931.1	no significant homology.
NP_560932.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_560933.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_560934.1	no significant homology.
NP_560935.1	no significant homology.
NP_560936.1	similar to sp:ADDB_BACSU ATP-DEPENDENT NUCLEASE SUBUNIT B from Bacillus subtilis (1166 aa); 32.7% identity in 1153 aa overlap. 1  transmembrane region was found by PSORT
NP_560937.1	similar to sp:ADDA_BACSU ATP-DEPENDENT NUCLEASE SUBUNIT A from Bacillus subtilis (1232 aa); 39.9% identity in 1256 aa overlap
NP_560938.1	similar to pir:A70188 polynucleotide adenylyltransferase (papS) homolog from Borrelia burgdorferi (410 aa); 38.2% identity in 411 aa overlap
NP_560939.1	similar to pir:G69818 CMP-binding factor homolog yhaM from Bacillus subtilis (314 aa); 41.2% identity in 301 aa overlap
NP_560940.1	C-terminal portion is similar to pir:A69760 conserved hypothetical protein yciB from Bacillus subtilis (194 aa); 33.9% identity in 165 aa overlap.  N-terminal signal sequence was found by PSORT
NP_560941.1	catalyzes the release of the N-terminal amino acid from a tripeptide
NP_560942.1	similar to pir:D69841 hypothetical protein yitS from Bacillus subtilis (283 aa); 36.8% identity in 280 aa overlap. 1  transmembrane region was found by PSORT
NP_560943.1	partially similar to gpu:AE004265_8 hypothetical protein from Vibrio cholerae (383 aa); 27.3% identity in 161 aa overlap
NP_560944.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
NP_560945.1	similar to pir:S38906 hypothetical protein 4 from Clostridium pasteurianum (190 aa); 45.7% identity in 186 aa overlap; TetR/AcrR family
NP_560946.1	similar to pir:F72326 hemolysin-related protein from Thermotoga maritima (strain MSB8) (455 aa); 34.2% identity in 401 aa overlap.Similar to many  hemolysins. N-terminal signal sequence and 3  transmembrane regions were found by PSORT
NP_560947.1	similar to sp:YAAJ_BACSU HYPOTHETICAL 17.8 KDA PROTEIN IN SERS-DNAH INTERGENIC REGION from Bacillus subtilis (161 aa); 52.8% identity in 125 aa overlap
NP_560948.1	no significant homology.
NP_560949.1	no significant homology.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_560950.1	similar to sp:Y531_BORBU HYPOTHETICAL PROTEIN BB0531 PRECURSOR from Borrelia burgdorferi (204 aa); 27.5% identity in 193 aa overlap.  N-terminal signal sequence was found by PSORT
NP_560951.1	similar to sp:YPLC_CLOPE HYPOTHETICAL 55.7 KDA PROTEIN IN PLC 5'REGION (ORF 2) from Clostridium perfringens (490 aa); 98.8% identity in 490 aa overlap
NP_560952.1	similar to gp:CLOCPAA_1 alpha-toxin (phospholipase C) from Clostridium perfringens (398 aa); 100% identity in 398 aa overlap.  N-terminal signal sequence was found by PSORT; alpha-toxin
NP_560953.1	similar to pir:H70313 cobalamin synthesis related protein CobW from Aquifex aeolicus (292 aa); 30.7% identity in 261 aa overlap
NP_560954.1	similar to pir:B69760 conserved hypothetical protein yciC from Bacillus subtilis (397 aa); 28.2% identity in 174 aa overlap. 1  transmembrane region was found by PSORT
NP_560955.1	similar to gpu:AP001512_105 BH1518 gene product from Bacillus halodurans (337 aa); 39.6% identity in 283 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.
NP_560956.1	partially similar to gpu:AP001512_104 BH1517 gene product from Bacillus halodurans (321 aa); 26.9% identity in 108 aa overlap.  N-terminal signal sequence and 2 transmembrane regions were found by PSORT.
NP_560957.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
NP_560958.1	similar to gp:CLOSERTRNA_1 Orf1 from Clostridium perfringens (167 aa); 82.6% identity in 167 aa overlap
NP_560959.1	similar to gp:CLOSERTRNA_2 sodium-coupled branched-chain amino acid carrier from Clostridium perfringens (338 aa); 95.3% identity in 338 aa overlap. N-terminal signal sequence and 11  transmembrane regions were found by PSORT
NP_560960.1	similar to pir:S52336 dihydrofolate reductase (EC 1.5.1.3) from Haemophilus influenzae (clinical isolate R1042) (160 aa); 40.4% identity in 136 aa overlap
NP_560961.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
NP_560962.1	similar to sp|P24281|YAAK_BACSU HYPOTHETICAL 11.8 KD PROTEIN IN DNAZ-RECR INTERGENIC REGION from Bacillus subtilis (107 aa); 60% identity in 50 aa overlap
NP_560963.1	involved in a recombinational process of DNA repair, independent of the recBC complex
NP_560964.1	no significant homology.
NP_560965.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_560966.1	no significant homology. 8  transmembrane regions were found by PSORT.
NP_560967.1	no significant homology.
NP_560968.1	no significant homology.
NP_560969.1	similar to pir:E71001 probable transaminase (EC 2.6.1.-) PH1308 from Pyrococcus horikoshii (386 aa); 38.6% identity in 342 aa overlap
NP_560970.1	similar to pir:B72257 D-3-phosphoglycerate dehydrogenase from Thermotoga maritima (strain MSB8) (306 aa); 42.4% identity in 297 aa overlap
NP_560971.1	similar to pir:G72244 hypothetical protein from Thermotoga maritima (strain MSB8) (406 aa); 41.9% identity in 415 aa overlap
NP_560972.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
NP_560973.1	similar to gpu:AP001511_144 BH1255 gene product from Bacillus halodurans (259 aa); 37.4% identity in 246 aa overlap. 2  transmembrane regions were found by PSORT.
NP_560974.1	similar to pir:S66834 probable membrane protein YOL137w from yeast (Saccharomyces cerevisiae) (497 aa); 25.2% identity in 262 aa overlap.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_560975.1	C-terminal portion is similar to gpu:AP001509_23 ribosomal-protein (S5)-alanine N-acetyltransferase from Bacillus halodurans (182 aa); 39% identity in 164 aa overlap
NP_560976.1	similar to pir:B56168 deoxyguanosine kinase (EC 2.7.1.113) from Lactobacillus acidophilus (224 aa); 44.2% identity in 199 aa overlap
NP_560977.1	similar to pir:T35220 probable integral membrane transport protein from Streptomyces coelicolor (474 aa); 28.8% identity in 427 aa overlap
NP_560978.1	no significant homology.
NP_560979.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
NP_560980.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
NP_560981.1	similar to gpu:AP001510_259 glycogen phosphorylase from Bacillus halodurans (815 aa); 53.9% identity in 801 aa overlap
NP_560982.1	similar to prf:2008115A amylopullulanase from Thermoanaerobacterium saccharolyticum (1288 aa); 39.2% identity in 587 aa overlap
NP_560983.1	no significant homology.
NP_560984.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
NP_560985.1	similar to gpu:AP001510_261 required for glycogen biosynthesis from Bacillus halodurans (368 aa); 41.2% identity in 364 aa overlap
NP_560986.1	similar to gpu:AP001519_222 acetobutylicum phosphotransbutyrylase from Bacillus halodurans (146 aa); 43% identity in 135 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_560987.1	similar to sp:CLS2_BACSU PROBABLE CARDIOLIPIN SYNTHETASE 2 (EC 2.7.8.-) (CARDIOLIPIN SYNTHASE 2) (CL SYNTHASE 2) from Bacillus subtilis (482 aa); 39.4% identity in 454 aa overlap. ATT start.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_560988.1	similar to gpu:AP001513_25 BH1752 gene product from Bacillus halodurans (514 aa); 47.8% identity in 508 aa overlap. 11  transmembrane regions were found by PSORT.
NP_560989.1	similar to pir|D69632 transcription antiterminator glcT from Bacillus subtilis (285 aa); 35.5% identity in 169 aa overlap. Probably truncated by frameshift mutation
NP_560990.1	similar to gb|AAB38977.1| (U34873) transcription antiterminator from Bacillus stearothermophilus (277 aa); 31.9% identity in 119 aa overlap. Probably truncated by frameshift mutation
NP_560991.1	no significant homology.
NP_560992.1	similar to N-terminal of sp:PTAA_KLEPN PTS SYSTEM, N-ACETYLGLUCOSAMINE-SPECIFIC IIABC COMPONENT (EIIABC-NAG) (N-ACETYLGLUCOSAMINE-PERMEASE IIABC COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, ABC COMPONENT) (EC 2.7.1.69) (EII-NAG) from Klebsiella pneumoniae (651 aa); 46.7% identity in 366 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_560993.1	no significant homology.
NP_560994.1	similar to sp:YHGD_BACSU HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN HEMY-GLTT INTERGENIC REGION (ORFA) from Bacillus subtilis (191 aa); 30.2% identity in 126 aa overlap; TetR/AcrR family
NP_560995.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_560996.1	no significant homology.
NP_560997.1	similar to sp:GLK_BACSU GLUCOKINASE (EC 2.7.1.2) (GLUCOSE KINASE) from Bacillus subtilis (321 aa); 34.7% identity in 297 aa overlap. 1  transmembrane region was found by PSORT
NP_560998.1	similar to sp:Y746_METJA HYPOTHETICAL PROTEIN MJ0746 from Methanococcus jannaschii (141 aa); 44.8% identity in 143 aa overlap
NP_560999.1	similar to pir:A70471 phosphoglycerate mutase 1 from Aquifex aeolicus (212 aa); 30% identity in 200 aa overlap. (EC 5.4.2.1)
NP_561000.1	similar to sp:IOLR_BACSU DNA-BINDING PROTEIN IOLR from Bacillus subtilis (251 aa); 44.4% identity in 250 aa overlap
NP_561001.1	similar to pir:A42952 methanol dehydrogenase (EC 1.1.1.244) from Bacillus sp. (381 aa); 35.4% identity in 381 aa overlap
NP_561002.1	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
NP_561003.1	similar to sp:IOLC_BACSU IOLC PROTEIN from Bacillus subtilis (325 aa); 46.5% identity in 318 aa overlap
NP_561004.1	similar to sp:IOLB_BACSU IOLB PROTEIN from Bacillus subtilis (271 aa); 24.6% identity in 244 aa overlap
NP_561005.1	similar to sp:IOLD_BACSU PROBABLE MALONIC SEMIALDEHYDE OXIDATIVE DECARBOXYLASE (EC 1.-.-.-) from Bacillus subtilis (580 aa); 53.8% identity in 586 aa overlap. 1  transmembrane region was found by PSORT
NP_561006.1	similar to sp:YRBE_BACSU HYPOTHETICAL 37.8 KDA PROTEIN IN CSBX-NADA INTERGENIC REGION (ORF1) from Bacillus subtilis (341 aa); 49.1% identity in 318 aa overlap
NP_561007.1	similar to sp:IOLE_BACSU IOLE PROTEIN from Bacillus subtilis (297 aa); 44.6% identity in 294 aa overlap
NP_561008.1	uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function
NP_561009.1	similar to gpu:AP001514_226 dehydrogenase from Bacillus halodurans (345 aa); 62.5% identity in 339 aa overlap
NP_561010.1	similar to sp:YWCJ_BACSU HYPOTHETICAL 28.4 KDA PROTEIN IN SACT-SACP INTERGENIC REGION from Bacillus subtilis (256 aa); 35.1% identity in 242 aa overlap. 6 transmembrane regions were found by PSORT.
NP_561011.1	similar to gp:TTBCSOPRN_1 crotonase from Thermoanaerobacterium thermosaccharolyticum (259 aa); 58.9% identity in 253 aa overlap. (EC 4.2.1.55); 3-hydroxybutyryl-CoA dehydratase
NP_561012.1	similar to gp:CPR276553_2 propionate CoA-transferase from Clostridium propionicum (524 aa); 56.6% identity in 516 aa overlap. 1  transmembrane region was found by PSORT
NP_561013.1	similar to sp:ACDS_CLOAB ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE) from Clostridium acetobutylicum (379 aa); 58.5% identity in 378 aa overlap. 1  transmembrane region was found by PSORT
NP_561014.1	similar to pir:A69364 hypothetical protein AF0913 from Archaeoglobus fulgidus (112 aa); 43.1% identity in 116 aa overlap
NP_561015.1	forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone
NP_561016.1	in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone
NP_561017.1	similar to pir:B69532 multidrug resistance protein homolog from Archaeoglobus fulgidus (503 aa); 30.2% identity in 424 aa overlap.  N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561018.1	no significant homology.
NP_561019.1	Converts (S)-lactate and NAD(+) to pyruvate and NADH
NP_561020.1	no significant homology. 5  transmembrane regions were found by PSORT.
NP_561021.1	no significant homology.
NP_561022.1	partially similar to pir:S32215 hypothetical protein 1 from Bacillus megaterium (226 aa); 29.9% identity in 67 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561023.1	partially similar to pir:S32215 hypothetical protein 1 from Bacillus megaterium (226 aa); 28% identity in 100 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561024.1	similar to gp:CTH275974_4  GTP-binding protein from Clostridium thermocellum (400 aa); 39% identity in 433 aa overlap
NP_561025.1	no significant homology.
NP_561026.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain
NP_561027.1	similar to pir:A72274 hypothetical protein from Thermotoga maritima (strain MSB8) (82 aa); 34.7% identity in 75 aa overlap
NP_561028.1	N-terminal portion is similar to sp:YPUA_BACSU HYPOTHETICAL 31.3 KDA PROTEIN IN LYSA-PPIB INTERGENIC REGION (ORFX19) from Bacillus subtilis (290 aa); 32.2% identity in 273 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561029.1	no significant homology.
NP_561030.1	no significant homology.
NP_561031.1	similar to gp:SCC53_4  secreted protein from Streptomyces coelicolor A3(2) (336 aa); 33.7% identity in 199 aa overlap
NP_561032.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561033.1	similar to pir:A70030 hypothetical protein yvbJ from Bacillus subtilis (605 aa); 25% identity in 172 aa overlap. 1  transmembrane region was found by PSORT
NP_561034.1	no significant homology. 4  transmembrane regions were found by PSORT.
NP_561035.1	similar to gp:AF036964_1  response regulator from Lactobacillus sakei (224 aa); 49.3% identity in 203 aa overlap
NP_561036.1	similar to gp:AF036964_2  histidine kinase from Lactobacillus sakei (339 aa); 38.2% identity in 178 aa overlap. 1  transmembrane region was found by PSORT
NP_561037.1	no significant homology.
NP_561038.1	similar to gpu:AP001508_9 ABC transporter (ATP-binding protein) from Bacillus halodurans (259 aa); 52% identity in 252 aa overlap; ATP-binding protein
NP_561039.1	similar to pir:G70032 ABC transporter (permease) homolog yvcS from Bacillus subtilis (646 aa); 24.1% identity in 602 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.; permease
NP_561040.1	no significant homology.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561041.1	similar to pir:F69799 hypothetical protein yezA from Bacillus subtilis (68 aa); 37.9% identity in 66 aa overlap
NP_561042.1	no significant homology.
NP_561043.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561044.1	similar to gpu:AE004302_6 conserved hypothetical protein from Vibrio cholerae (322 aa); 28.8% identity in 240 aa overlap. ATT start.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561045.1	similar to sp:YEIH_HAEIN HYPOTHETICAL PROTEIN HI1643 from Haemophilus influenzae (338 aa); 28% identity in 314 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.
NP_561046.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561047.1	similar to pir:B71256 conserved hypothetical integral membrane protein TP0986 from Treponema pallidum (294 aa); 33.7% identity in 270 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561048.1	similar to sp:CINA_BACSU  COMPETENCE-DAMAGE PROTEIN from Bacillus subtilis (416 aa); 43.1% identity in 394 aa overlap
NP_561049.1	similar to pir:S75835 hypothetical protein slr1288 from Synechocystis sp. (strain PCC 6803) (194 aa); 30.2% identity in 126 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561050.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561051.1	similar to sp:RUBY_CLOPE RUBRERYTHRIN from Clostridium perfringens (195 aa); 99% identity in 195 aa overlap
NP_561052.1	similar to sp:Y099_PYRHO HYPOTHETICAL PROTEIN PH0099 from Pyrococcus horikoshii (184 aa); 31.3% identity in 96 aa overlap
NP_561053.1	similar to pir:D69813 ABC transporter (ATP-binding protein) homolog yfmM from Bacillus subtilis (518 aa); 72.9% identity in 517 aa overlap; ATP-binding protein
NP_561054.1	similar to C-terminal of prf:2220313B ORF 3 - Lactococcal bacteriophage TP901-1 from Bacteriophage TP901-1 (181 aa); 39.5% identity in 167 aa overlap
NP_561055.1	similar to gp:AF125554_2  transposase from Enterococcus faecium (156 aa); 72.4% identity in 156 aa overlap
NP_561056.1	similar to prf:2303403A ORF 1 from Salmonella enterica (618 aa); 28% identity in 558 aa overlap
NP_561057.1	no significant homology.
NP_561058.1	similar to N-terminal of prf:2416406A   ORF A from Lactobacillus casei phage A2 (160 aa); 32.1% identity in 53 aa overlap
NP_561059.1	similar to N-terminal of gp:AF162221_131 ORF131 from Xestia c-nigrum granulovirus (442 aa); 40% identity in 75 aa overlap. ATT start
NP_561060.1	in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown
NP_561061.1	no significant homology.
NP_561062.1	similar to pir:G72422 2-keto-3-deoxygluconate kinase from Thermotoga maritima (strain MSB8) (339 aa); 38.2% identity in 322 aa overlap
NP_561063.1	similar to sp:BGLR_ECOLI BETA-GLUCURONIDASE (EC 3.2.1.31) (GUS) (BETA-D-GLUCURONOSIDE GLUCURONOSOHYDROLASE) from Escherichia coli (603 aa); 48.3% identity in 598 aa overlap
NP_561064.1	similar to prf:2514353L regulatory protein from Bacillus stearothermophilus (249 aa); 36.5% identity in 208 aa overlap; GntR family
NP_561065.1	Converts D-mannonate to D-mannuronate
NP_561066.1	similar to pir:F72422 KHG-KDPG bifunctional aldolase TM0066 from Thermotoga maritima (strain MSB8) (205 aa); 46.7% identity in 197 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561067.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
NP_561068.1	catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism
NP_561069.1	similar to sp:UIDB_ECOLI GLUCURONIDE CARRIER PROTEIN (GLUCURONIDE PERMEASE) from Escherichia coli (457 aa); 30.5% identity in 442 aa overlap. 9  transmembrane regions were found by PSORT.
NP_561070.1	similar to gp:AP001509_113 beta-hexosamidase A precursor from Bacillus halodurans (686 aa); 29% identity in 412 aa overlap
NP_561071.1	partially similar to gpu:AP001508_84 BH0361 gene product from Bacillus halodurans (1661 aa); 26.4% identity in 273 aa overlap.Also some similarity to sp:CNA_STAAU COLLAGEN ADHESIN PRECURSOR from Staphylococcus aureus. N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561072.1	similar to sp:TEE6_STRPY TRYPSIN-RESISTANT SURFACE T6 PROTEIN PRECURSOR from Streptococcus pyogenes (537 aa); 26.4% identity in 455 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561073.1	similar to gp:AF019629_2  fimbria-associated protein from Actinomyces naeslundii (365 aa); 39.5% identity in 205 aa overlap. 1  transmembrane region was found by PSORT
NP_561074.1	partially similar to gpu:AP001512_149 BH1562 gene product from Bacillus halodurans (268 aa); 26.2% identity in 103 aa overlap
NP_561075.1	similar to sp:YDJZ_ECOLI HYPOTHETICAL 26.2 KDA PROTEIN IN XTHA-GDHA INTERGENIC REGION from Escherichia coli (235 aa); 23% identity in 152 aa overlap. 5 transmembrane regions were found by PSORT.
NP_561076.1	similar to pir:T35433 hypothetical protein SC6A9.02 SC6A9.02 from Streptomyces coelicolor (213 aa); 45.2% identity in 177 aa overlap
NP_561077.1	no significant homology.
NP_561078.1	similar to pir:A43577 regulatory protein pfoR from Clostridium perfringens (343 aa); 88.7% identity in 327 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561079.1	similar to sp:TACY_CLOPE PERFRINGOLYSIN O PRECURSOR (THETA-TOXIN) (THIOL-ACTIVATED CYTOLYSIN) from Clostridium perfringens (500 aa); 99.8% identity in 500 aa overlap. N-terminal signal sequence was found by PSORT
NP_561080.1	similar to gp:CLOPBG_2 unknown from Clostridium perfringens (152 aa); 100% identity in 152 aa overlap
NP_561081.1	similar to gp:CLOPBG_3 unknown from Clostridium perfringens (72 aa); 100% identity in 55 aa overlap
NP_561082.1	similar to gp:CLOPBG_4 membrane-spanning transporter protein from Clostridium perfringens (495 aa); 94.9% identity in 495 aa overlap.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_561083.1	similar to gp:CLOPBG_5 beta-galactosidase from Clostridium perfringens (676 aa); 99.4% identity in 676 aa overlap
NP_561084.1	catalyzes the degradation of arginine to citruline and ammonia
NP_561085.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
NP_561086.1	similar to sp:ARCD_CLOPE ARGININE/ORNITHINE ANTIPORTER from Clostridium perfringens (476 aa); 88.5% identity in 478 aa overlap.  N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561087.1	catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
NP_561088.1	similar to sp:ARGR_CLOPE ARGININE REPRESSOR from Clostridium perfringens (145 aa); 91% identity in 144 aa overlap
NP_561089.1	similar to sp:COLA_CLOPE MICROBIAL COLLAGENASE PRECURSOR (EC 3.4.24.3) (120 KDA COLLAGENASE) from Clostridium perfringens (1104 aa); 98.1% identity in 1104 aa overlap.  N-terminal signal sequence was found by PSORT; kappa-toxin
NP_561090.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
NP_561091.1	similar to pir:A83577 probable transcription regulator PA0547 from Pseudomonas aeruginosa (344 aa); 33.6% identity in 134 aa overlap.Also similar to pir:E69758 hypothetical protein ycgJ from Bacillus subtilis. 1  transmembrane region was found by PSORT
NP_561092.1	similar to gp:AB028629_1 cystathionine beta-synthase from Clostridium perfringens (351 aa); 96.6% identity in 351 aa overlap. 1  transmembrane region was found by PSORT
NP_561093.1	similar to pir:T43792 cysteine synthase (EC 4.2.99.8) cysK from Clostridium perfringens (302 aa); 96.7% identity in 302 aa overlap. 1  transmembrane region was found by PSORT
NP_561094.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
NP_561095.1	similar to pir:T43794 probable lipase lipA from Clostridium perfringens (311 aa); 99.4% identity in 310 aa overlap. ATA start
NP_561096.1	similar to pir:H75377 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (262 aa); 28.5% identity in 263 aa overlap. 5  transmembrane regions were found by PSORT.
NP_561097.1	similar to pir:G75377 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (267 aa); 21.2% identity in 226 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561098.1	similar to gp:SCE6_29  ABC-transport protein, ATP-binding component from Streptomyces coelicolor A3(2) (354 aa); 50% identity in 258 aa overlap; ATP-binding protein
NP_561099.1	similar to sp:YFKO_BACSU  NAD(P)H NITROREDUCTASE YFKO (EC 1.-.-.-) from Bacillus subtilis (221 aa); 42.9% identity in 217 aa overlap
NP_561100.1	Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate
NP_561101.1	catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid
NP_561102.1	similar to pir:S75887 hypothetical protein from Synechocystis sp. (strain PCC 6803 (512 aa); 31.5% identity in 428 aa overlap.  N-terminal signal sequence and 12  transmembrane regions were found by PSORT.
NP_561103.1	similar to pir:S56477 hypothetical 17.3K protein (pyrL-argI intergenic region) from Escherichia coli (153 aa); 32% identity in 153 aa overlap
NP_561104.1	similar to pir:S43901 hypothetical protein A from Clostridium perfringens (182 aa); 90.4% identity in 177 aa overlap. Also similar to gp:AP001509_235 glucose kinase from Bacillus halodurans. 2  transmembrane regions were found by PSORT.
NP_561105.1	similar to sp:YNGB_CLOPE HYPOTHETICAL 31.2 KDA PROTEIN IN NAGH 5'REGION (ORFB) from Clostridium perfringens (279 aa); 100% identity in 279 aa overlap
NP_561106.1	similar to sp:YNGC_CLOPE HYPOTHETICAL 10.8 KDA PROTEIN IN NAGH 5'REGION (ORFC) from Clostridium perfringens (94 aa); 100% identity in 86 aa overlap. N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561107.1	similar to sp:NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSOR (EC 3.2.1.35) (HYALURONIDASE) (MU TOXIN) from Clostridium perfringens (1042 aa); 97.5% identity in 1041 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561108.2	catalyzes the ATP-dependent transport of cobalt
NP_561109.1	periplasmic cobalt binding component of the cobalt transport system
NP_561110.1	similar to pir:H64435 cobalt transport protein Q homolog from Methanococcus jannaschii (268 aa); 34.2% identity in 225 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561111.1	with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene
NP_561112.1	similar to sp:PTIB_BACSU PTS SYSTEM, ARBUTIN-LIKE IIBC COMPONENT (PHOSPHOTRANSFERASE ENZYME II, BC COMPONENT) (EC 2.7.1.69) from Bacillus subtilis (527 aa); 60.7% identity in 527 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_561113.1	similar to sp:YFIA_BACSU HYPOTHETICAL 29.3 KDA PROTEIN IN GLVG-GLVBC INTERGENIC REGION from Bacillus subtilis (254 aa); 40.2% identity in 254 aa overlap
NP_561114.1	partially similar to sp:YFIA_BACSU HYPOTHETICAL 29.3 KDA PROTEIN IN GLVG-GLVBC INTERGENIC REGION from Bacillus subtilis (254 aa); 26.7% identity in 90 aa overlap
NP_561115.1	similar to sp:MALH_FUSMR MALTOSE-6'-PHOSPHATE GLUCOSIDASE (EC 3.2.1.122) (6-PHOSPHO-ALPHA-D- GLUCOSIDASE) from Fusobacterium mortiferum (441 aa); 81.4% identity in 441 aa overlap
NP_561116.1	no significant homology.
NP_561117.1	similar to gp:FMY12759_1 acid phosphatase from Chryseobacterium meningosepticum (267 aa); 42.3% identity in 234 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561118.1	similar to gpu:AP001519_115 cell wall-binding protein from Bacillus halodurans (461 aa); 32.4% identity in 336 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561119.1	partially similar to N-terminal of pir:G64667 NA+/H+ antiporter from Helicobacter pylori (strain 26695) (383 aa); 28% identity in 150 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561120.1	similar to gp:AF125164_20  acetyltransferase from Bacteroides fragilis (194 aa); 30.7% identity in 101 aa overlap
NP_561121.1	similar to pir:E70718 hypothetical protein Rv0967 from Mycobacterium tuberculosis (strain H37RV) (119 aa); 34.9% identity in 83 aa overlap
NP_561122.1	no significant homology.
NP_561123.1	similar to pir:C72228 sensor histidine kinase HpkA from Thermotoga maritima (strain MSB8) (412 aa); 28.4% identity in 349 aa overlap. 8  transmembrane regions were found by PSORT.
NP_561124.1	similar to pir:S23349 hypothetical protein 17.4 from Salmonella choleraesuis (367 aa); 24.8% identity in 319 aa overlap.  N-terminal signal sequence and 6 transmembrane regions were found by PSORT.
NP_561125.1	no significant homology.
NP_561126.1	no significant homology.
NP_561127.1	partially similar to pir:F75103 probable purine NTPase PAB0812 from Pyrococcus abyssi (strain Orsay) (880 aa); 33.3% identity in 201 aa overlap
NP_561128.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561129.1	similar to gpu:AE004134_7 conserved hypothetical protein from Vibrio cholerae (287 aa); 34.2% identity in 263 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_561130.1	similar to sp:HO1_SYNY3 HEME OXYGENASE 1 (EC 1.14.99.3) from Synechocystis sp. (strain PCC 6803) (240 aa); 32.5% identity in 200 aa overlap
NP_561131.1	similar to sp:SBCD_BACSU EXONUCLEASE SBCD HOMOLOG (FRAGMENT) from Bacillus subtilis (325 aa); 38.1% identity in 339 aa overlap
NP_561132.1	similar to >gp:CPSBCC_1 sbcC gene product from Clostridium perfringens (140 aa); 91.4% identity in 140 aa overlap
NP_561133.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
NP_561134.1	similar to gpu:AE004132_1 DnaJ-related protein from Vibrio cholerae (284 aa); 27.9% identity in 208 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561135.1	similar to C-terminal of gpu:AP001511_12 BH1123 gene product from Bacillus halodurans (526 aa); 34.7% identity in 101 aa overlap.Also similar to C-terminal of many regulatory proteins
NP_561136.1	similar to gpu:AP001518_129 BH3298 gene product from Bacillus halodurans (1071 aa); 24.4% identity in 439 aa overlap. Also some similarity to gp:AB012764_1 Chitinase A from Clostridium paraputrificum (832 aa). N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561137.1	similar to gpu:AP001518_130 BH3299 gene product from Bacillus halodurans (221 aa); 20.3% identity in 153 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_561138.1	similar to gpu:AP001519_111 BH3596 gene product from Bacillus halodurans (187 aa); 30.2% identity in 126 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561139.1	similar to gpu:AP001518_128 ferrichrome ABC transporter (ferrichrome-binding protein) from Bacillus halodurans (302 aa); 36.2% identity in 287 aa overlap; ferrichrome-binding protein
NP_561140.1	similar to gpu:AP001518_127 ferrichrome ABC transporter (permease) from Bacillus halodurans (328 aa); 35.6% identity in 298 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.; permease
NP_561141.1	similar to gpu:AP001518_126 ferrichrome ABC transporter (ATP-binding protein) from Bacillus halodurans (256 aa); 48.4% identity in 250 aa overlap; ATP-binding protein
NP_561142.1	similar to sp:Y663_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI0663 from Haemophilus influenzae Rd (560 aa); 44.2% identity in 550 aa overlap. 6  transmembrane regions were found by PSORT.; ATP-binding protein
NP_561143.1	similar to sp:Y664_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI0664 from Haemophilus influenzae Rd (552 aa); 43.2% identity in 551 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; ATP-binding protein
NP_561144.1	no significant homology.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561145.1	similar to prf:2511340D ygbA gene from Proteus mirabilis (75 aa); 54.4% identity in 57 aa overlap
NP_561146.1	no significant homology.
NP_561147.1	can hydrolyze p-nitrophenyl sulfate; contains a specific cysteine that is converted into C{alpha]-formylglycine upon activation with the anaerobic sulfatase-maturase
NP_561148.1	similar to sp:GLPT_BACSU GLYCEROL-3-PHOSPHATE TRANSPORTER (G-3-P TRANSPORTER) (G-3-P PERMEASE) from Bacillus subtilis (444 aa); 48.5% identity in 412 aa overlap. 8  transmembrane regions were found by PSORT.
NP_561149.1	similar to prf:2223232C   Fe-binding protein from Actinobacillus pleuropneumoniae (346 aa); 28.5% identity in 291 aa overlap.  N-terminal signal sequence was found by PSORT; periplasmic iron-compound-binding protein
NP_561150.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561151.1	similar to gp:AB028738_5 Sensor histidine kinase VirJ from Clostridium perfringens (471 aa); 30.3% identity in 413 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_561152.1	similar to gp:CAU58131_2 PhoP from Clostridium acetobutylicum (217 aa); 38.3% identity in 222 aa overlap. 1  transmembrane region was found by PSORT
NP_561153.1	similar to prf:2210362A   grmA gene from Bacillus megaterium (386 aa); 36.4% identity in 357 aa overlap.Also similar to many bacterial Na+/H+ antiporters.  N-terminal signal sequence and 12  transmembrane regions were found by PSORT.
NP_561154.1	no significant homology.
NP_561155.1	no significant homology.
NP_561156.1	partially similar to pir:T28317 ORF MSV156 hypothetical protein from Melanoplus sanguinipes entomopoxvirus (1127 aa); 24.2% identity in 293 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561157.1	similar to C-terminal half of pir:F81407 probable periplasmic protein Cj0599 from Campylobacter jejuni (strain NCTC 11168) (317 aa); 26% identity in 181 aa overlap. 1  transmembrane region was found by PSORT
NP_561158.1	similar to prf:2503398E divercin immunity protein from Carnobacterium divergens (97 aa); 64.3% identity in 98 aa overlap
NP_561159.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561160.1	similar to C-terminal of pir:S76167 hypothetical protein from Synechocystis sp. (strain PCC 6803) (529 aa); 34.3% identity in 67 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561161.1	similar to C-terminal half of gp:BCE243712_8 YkoW protein from Bacillus cereus (892 aa); 32.5% identity in 425 aa overlap.  N-terminal signal sequence and 7 transmembrane regions were found by PSORT.
NP_561162.1	partially similar to sp:Y798_METJA HYPOTHETICAL PROTEIN MJ0798 from Methanococcus jannaschii (334 aa); 29.1% identity in 134 aa overlap
NP_561163.1	similar to sp:GRPE_FRATU GRPE PROTEIN (HSP-70 COFACTOR) from Francisella tularensis (195 aa); 35.2% identity in 105 aa overlap
NP_561164.1	similar to pir:C72385 dnaK-type molecular chaperone dnaK from Thermotoga maritima (strain MSB8) (596 aa); 43.3% identity in 563 aa overlap
NP_561165.1	partially similar to prf:2123314A   SPR3 gene from Saccharomyces cerevisiae (512 aa); 26.7% identity in 161 aa overlap
NP_561166.1	similar to prf:2315479F   epsC gene from Lactococcus lactis (254 aa); 37.4% identity in 235 aa overlap; EpsC
NP_561167.1	similar to pir:H82985 hypothetical protein from Pseudomonas aeruginosa (423 aa); 26.6% identity in 331 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561168.1	similar to N-terminal of sp:DIVB_BACSU DIVISION INITIATION PROTEIN (CELL DIVISION AND SPORULATION PROTEIN) from Bacillus subtilis (263 aa); 25.2% identity in 115 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561169.1	no significant homology.
NP_561170.1	no significant homology.
NP_561171.1	no significant homology.
NP_561172.1	Modulates the activities of several enzymes which are inactive in their acetylated form
NP_561173.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_561174.1	similar to pir:H75270 transcription regulator, PbsX family from Deinococcus radiodurans (strain R1) (64 aa); 40% identity in 60 aa overlap
NP_561175.1	similar to gp:AP001511_272 transcriptional factor from Bacillus halodurans (201 aa); 22.5% identity in 173 aa overlap
NP_561176.1	similar to gpu:AP001516_112 BH2683 gene product from Bacillus halodurans (379 aa); 39% identity in 272 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561177.1	similar to gpu:AE004159_7 copper homeostasis protein from Vibrio cholerae (254 aa); 38.2% identity in 199 aa overlap
NP_561178.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_561179.1	no significant homology.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_561180.1	no significant homology.
NP_561181.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NP_561182.1	similar to sp:YBBD_BACSU HYPOTHETICAL 70.6 KDA LIPOPROTEIN IN FEUA-SIGW INTERGENIC REGION PRECURSOR (ORF1) from Bacillus subtilis (642 aa); 46.4% identity in 619 aa overlap. Also similar to gp:AP001509_113 beta-hexosamidase A precursor from Bacillus halodurans. N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561183.1	similar to gpu:AP001510_123 bacterioferritin comigratory protein from Bacillus halodurans (154 aa); 61.2% identity in 147 aa overlap
NP_561184.1	similar to gpu:AP001511_66 protein secretion (post-translocation chaperonin) from Bacillus halodurans (333 aa); 31.5% identity in 235 aa overlap
NP_561185.1	similar to gp:AF071085_12  ABC transporter permease from Enterococcus faecalis (264 aa); 32.7% identity in 269 aa overlap. 6  transmembrane regions were found by PSORT.; permease
NP_561186.1	similar to gp:AB030032_11  ABC transporter from Actinobacillus actinomycetemcomitans (398 aa); 43.7% identity in 387 aa overlap; ATP-binding protein
NP_561187.1	similar to pir:C75592 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (415 aa); 27.1% identity in 251 aa overlap
NP_561188.1	similar to prf:2318308D   cps19bP gene from Streptococcus pneumoniae (360 aa); 30.5% identity in 256 aa overlap
NP_561189.1	similar to gp:AB030032_11  ABC transporter from Actinobacillus actinomycetemcomitans (398 aa); 40.1% identity in 389 aa overlap; ATP-binding protein
NP_561190.1	similar to prf:2318308D   cps19bP gene from Streptococcus pneumoniae (360 aa); 26.6% identity in 361 aa overlap
NP_561191.1	similar to gp:AE003576_10 Gs1l gene product from Drosophila melanogaster (231 aa); 29.2% identity in 209 aa overlap
NP_561192.1	partially similar to pir:G72256 hydrogenase (EC 1.18.99.1) (Fe) large chain from Thermotoga maritima (strain MSB8) (645 aa); 31.3% identity in 240 aa overlap
NP_561193.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561194.1	similar to gp:LMO250194_1 P45 from Listeria monocytogenes (401 aa); 26% identity in 388 aa overlap. N-terminal signal sequence was found by PSORT
NP_561195.1	similar to sp:YABB_BACSU HYPOTHETICAL 28.3 KDA PROTEIN IN XPAC-ABRB INTERGENIC REGION from Bacillus subtilis (247 aa); 43.3% identity in 240 aa overlap
NP_561196.1	similar to gpu:AP001507_49 BH0049 gene product from Bacillus halodurans (289 aa); 52.4% identity in 271 aa overlap
NP_561197.1	similar to gpu:AP001507_50 transcriptional pleiotropic regulator of transition state genes from Bacillus halodurans (96 aa); 76.7% identity in 60 aa overlap
NP_561198.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561199.1	similar to sp:LAXC_LACLA LACX PROTEIN, CHROMOSOMAL from Lactococcus lactis (299 aa); 33% identity in 288 aa overlap
NP_561200.1	similar to gp:EFA276231_1 PSR protein from Enterococcus faecalis (390 aa); 29.3% identity in 324 aa overlap. 1  transmembrane region was found by PSORT
NP_561201.1	similar to prf:2516401CC   yfkH gene from Bacillus cereus (289 aa); 39.4% identity in 249 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561202.1	similar to gpu:AP001510_283 UDP-glucose 4-epimerase from Bacillus halodurans (334 aa); 63.5% identity in 326 aa overlap
NP_561203.1	similar to gp:BA1242593_64  SSB protein from Bacteriophage A118 (160 aa); 45% identity in 111 aa overlap; SSB
NP_561204.1	similar to gp:RCAFDXC_3 ORFU1 product, potential FMN-protein from Rhodobacter capsulatus (435 aa); 42.6% identity in 387 aa overlap
NP_561205.1	similar to gpu:AP001509_223 endo-beta-N-acetylglucosaminidase from Bacillus halodurans (878 aa); 45% identity in 845 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561206.1	no significant homology.
NP_561207.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
NP_561208.1	similar to pir:C72317 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (490 aa); 37.6% identity in 474 aa overlap
NP_561209.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561210.1	no significant homology.
NP_561211.1	similar to gpu:AP001508_245 BH0522 gene product from Bacillus halodurans (116 aa); 73.9% identity in 111 aa overlap
NP_561212.1	similar to sp:TKTN_METJA  TRANSKETOLASE N-TERMINAL SECTION (EC 2.2.1.1) (TK) from Methanococcus jannaschii (274 aa); 57.7% identity in 267 aa overlap
NP_561213.1	similar to sp:TKTC_METJA  TRANSKETOLASE C-TERMINAL SECTION (EC 2.2.1.1) (TK) from Methanococcus jannaschii (316 aa); 51.2% identity in 303 aa overlap. 1 transmembrane region was found by PSORT
NP_561214.1	similar to pir:G72409 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (283 aa); 37% identity in 281 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561215.1	similar to pir:D69627 cell-division ATP-binding protein ftsE from Bacillus subtilis (228 aa); 60.7% identity in 224 aa overlap
NP_561216.1	similar to sp:FTSX_BACSU CELL DIVISION PROTEIN FTSX HOMOLOG from Bacillus subtilis (296 aa); 28.3% identity in 251 aa overlap. 4  transmembrane regions were found by PSORT.
NP_561217.1	similar to pir:B69610 carboxy-terminal processing proteinase ctpA (EC 3.4.99.-) from Bacillus subtilis (466 aa); 41% identity in 376 aa overlap.  N-terminal signal sequence was found by PSORT.
NP_561218.1	no significant homology.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561219.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
NP_561220.1	similar to sp:DEGV_BACSU DEGV PROTEIN from Bacillus subtilis (281 aa); 32.3% identity in 279 aa overlap. 1 transmembrane region was found by PSORT
NP_561221.1	similar to pir:B72334 ABC transporter, ATP-binding protein from Thermotoga maritima (strain MSB8) (260 aa); 42.9% identity in 238 aa overlap; ATP-binding protein
NP_561222.1	partially similar to gp:BSP250862_5 MrsE protein from Bacillus sp. HIL-Y85/54728 (244 aa); 27.9% identity in 183 aa overlap. 13  transmembrane regions were found by PSORT.
NP_561223.1	similar to pir:T43794 probable lipase lipA from Clostridium perfringens (311 aa); 23.1% identity in 260 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561224.1	similar to N-terminal of sp:MUTS_THEMA DNA MISMATCH REPAIR PROTEIN MUTS from Thermotoga maritima (793 aa); 32.2% identity in 267 aa overlap. 2  transmembrane regions were found by PSORT.
NP_561225.1	similar to sp:YCBG_BACSU HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN GLTP-CWLJ INTERGENIC REGION (ORF6). from Bacillus subtilis (233 aa); 30.8% identity in 224 aa overlap; GntR family
NP_561226.1	similar to gp:SILCT_2 lactate premease from Streptococcus iniae (474 aa); 49.5% identity in 416 aa overlap.  N-terminal signal sequence and 13  transmembrane regions were found by PSORT.
NP_561227.1	similar to sp:ETFB_CLOTS ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT (BETA-ETF) (ELECTRON TRANSFER FLAVOPROTEIN SMALL SUBUNIT) (ETFSS) from Clostridium thermosaccharolyticum (260 aa); 44.9% identity in 256 aa overlap
NP_561228.1	similar to sp:ETFA_CLOTS ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRON TRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) from Clostridium thermosaccharolyticum (330 aa); 49.1% identity in 212 aa overlap. 1  transmembrane region was found by PSORT
NP_561229.1	similar to pir:D69984 glycolate oxidase subunit homolog ysfC from Bacillus subtilis (470 aa); 39.9% identity in 431 aa overlap. 2  transmembrane regions were found by PSORT.
NP_561230.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561231.1	similar to sp:LEP_STAAU SIGNAL PEPTIDASE IB (EC 3.4.21.89) (SPASE IB) (LEADER PEPTIDASE IB) from Staphylococcus aureus (191 aa); 40% identity in 165 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561232.1	similar to gpu:AP001510_1 transcriptional repressor from Bacillus halodurans (251 aa); 32.3% identity in 220 aa overlap
NP_561233.1	similar to gpu:AP001512_138 rhamnulokinase (EC 2.7.1.5) from Bacillus halodurans (467 aa); 43.6% identity in 463 aa overlap
NP_561234.1	catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose
NP_561235.1	catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate
NP_561236.1	similar to N-terminal of gp:AF130465_1 mannose-specific phosphotransferase system component IIAB from Streptococcus salivarius (330 aa); 34.7% identity in 98 aa overlap. 1  transmembrane region was found by PSORT
NP_561237.1	similar to gp:AF129168_5 EIIB sorbose-PTS homolog from Lactobacillus casei (164 aa); 38.9% identity in 157 aa overlap; mannose-specific component IIAB
NP_561238.1	similar to sp:PTNC_ECOLI PTS SYSTEM, MANNOSE-SPECIFIC IIC COMPONENT (EIIC-MAN) (MANNOSE- PERMEASE IIC COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, C COMPONENT) (EII-P-MAN) from Escherichia coli (266 aa); 33.5% identity in 239 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.; mannose-specific component IIC
NP_561239.1	similar to gp:AF130465_3 mannose-specific phosphotransferase system component IID from Streptococcus salivarius (303 aa); 37% identity in 254 aa overlap. 5 transmembrane regions were found by PSORT.; mannose-specific component IID
NP_561240.1	similar to pir:T36467 probable glycosyl hydrolase from Streptomyces coelicolor (423 aa); 34% identity in 332 aa overlap
NP_561241.1	partially similar to pir:T36462 hypothetical protein SCF85.02 from Streptomyces coelicolor (499 aa); 33.3% identity in 78 aa overlap
NP_561242.1	catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate; tagatose pathway for galactose utilization
NP_561243.1	catalyzes the interconversion of galactose 6-phosphate to tagatose 6-phosphate
NP_561244.1	similar to sp:LACC_STAAU TAGATOSE-6-PHOSPHATE KINASE (EC 2.7.1.144) (PHOSPHOTAGATOKINASE) from Staphylococcus aureus (310 aa); 56.8% identity in 310 aa overlap
NP_561245.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561246.1	similar to pir:C69850 hypothetical protein yjgA from Bacillus subtilis (132 aa); 54.2% identity in 107 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561247.1	partially similar to pir:S32215 hypothetical protein 1 from Bacillus megaterium (226 aa); 54.4% identity in 57 aa overlap. 5  transmembrane regions were found by PSORT.
NP_561248.1	similar to sp:APL_LACLC ALKALINE PHOSPHATASE LIKE PROTEIN from Lactococcus lactis (242 aa); 32.5% identity in 169 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_561249.1	similar to pir:H69877 calcium-transporting ATPase homolog yloB from Bacillus subtilis (890 aa); 42.1% identity in 837 aa overlap. 9  transmembrane regions were found by PSORT.
NP_561250.1	some similarity to gpu:AB018117_28 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5 from Arabidopsis thaliana (268 aa); 37.6% identity in 125 aa overlap
NP_561251.1	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine
NP_561252.1	similar to pir:D71226 hypothetical protein PH0070 from Pyrococcus horikoshii (275 aa); 30.4% identity in 273 aa overlap.  N-terminal signal sequence and 8 transmembrane regions were found by PSORT.
NP_561253.1	similar to gp:BCE237785_5  amino acid transporter from Bacillus cereus (471 aa); 44.1% identity in 454 aa overlap. 11  transmembrane regions were found by PSORT.
NP_561254.1	partially similar to pir:S74882 hypothetical protein sll1151 from Synechocystis sp. (strain PCC 6803) (605 aa); 30.4% identity in 227 aa overlap. 7 transmembrane regions were found by PSORT.
NP_561255.1	similar to pir:D72342 tldD protein from Thermotoga maritima (strain MSB8) (499 aa); 51.6% identity in 467 aa overlap
NP_561256.1	similar to pir:E70461 pmbA protein from Synechocystis sp. (strain PCC 6803) (441 aa); 34.3% identity in 428 aa overlap
NP_561257.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
NP_561258.1	similar to gp:MAV011838_4 methylated-DNA-protein-cystein methyltransferase from Mycobacterium avium subsp. paratuberculosis (165 aa); 46.6% identity in 133 aa overlap
NP_561259.1	similar to pir:F69901 DNA helicase recQ from Bacillus subtilis (591 aa); 48.1% identity in 590 aa overlap. 1  transmembrane region was found by PSORT
NP_561260.1	similar to gpu:AP001513_52 BH1779 gene product from Bacillus halodurans (287 aa); 36.9% identity in 252 aa overlap
NP_561261.1	similar to gpu:AE004241_1 conserved hypothetical protein from Vibrio cholerae (458 aa); 29.3% identity in 444 aa overlap
NP_561262.1	similar to pir:C69661 transcription activator of multidrug-efflux transporter genes mta from Bacillus subtilis (257 aa); 44.3% identity in 246 aa overlap
NP_561263.1	similar to sp:YEIL_ECOLI HYPOTHETICAL 25.3 KDA PROTEIN IN NFO-FRUA INTERGENIC REGION from Escherichia coli (219 aa); 26.9% identity in 201 aa overlap. Also similar to prf:2508375B FNR-like protein from Lactococcus lactis and many transcriptional regulators
NP_561264.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NP_561265.1	similar to pir:A70700 hypothetical protein Rv0019c from Mycobacterium tuberculosis (strain H37RV) (155 aa); 31.8% identity in 88 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561266.1	similar to sp:FTSW_MYCTU PROBABLE CELL DIVISION PROTEIN FTSW from Mycobacterium tuberculosis (469 aa); 35.6% identity in 354 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561267.1	similar to pir:T36716 probable penicillin-binding protein from Streptomyces coelicolor (490 aa); 32.8% identity in 473 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561268.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NP_561269.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
NP_561270.1	similar to gpu:AP001519_84 BH3569 gene product from Bacillus halodurans (295 aa); 50.9% identity in 291 aa overlap
NP_561271.1	similar to sp:YAMB_THETU HYPOTHETICAL 35.6 KDA PROTEIN IN AMYB 5'REGION (ORF1) from Thermoanaerobacterium thermosulfurigenes (323 aa); 55.7% identity in 300 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561272.1	similar to gp:SAY14324_4 Staphylococcus aureus partial ORF292 and ORF271, ORF331 and ORF314 from Staphylococcus aureus (314 aa); 46.8% identity in 314 aa overlap
NP_561273.1	similar to C-terminal of prf:1711414A USO1 gene from Saccharomyces cerevisiae (1790 aa); 29.7% identity in 148 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561274.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561275.1	similar to gpu:AP001509_58 RNA polymerase ECF-type sigma factor from Bacillus halodurans (177 aa); 30.3% identity in 142 aa overlap
NP_561276.1	catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.
NP_561277.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
NP_561278.1	similar to sp:KPYK_BACSU PYRUVATE KINASE (EC 2.7.1.40) (PK) (VEGETATIVE PROTEIN 17) (VEG17) from Bacillus subtilis (585 aa); 56% identity in 466 aa overlap. 1  transmembrane region was found by PSORT
NP_561279.1	no significant homology.
NP_561280.1	similar to pir:T35593 probable dehydrogenase from Streptomyces coelicolor (257 aa); 32.4% identity in 210 aa overlap
NP_561281.1	similar to sp:CLS_CLOPE CARDIOLIPIN SYNTHETASE (EC 2.7.8.-) (CARDIOLIPIN SYNTHASE) (CL SYNTHASE) from Clostridium perfringens (476 aa); 34.1% identity in 451 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561282.1	similar to pir:B69780 transcription regulator GntR family homolog ydfD from Bacillus subtilis (482 aa); 26.7% identity in 475 aa overlap; GntR family
NP_561283.1	similar to gpu:AP001509_125 RNA methyltransferase from Bacillus halodurans (458 aa); 50.8% identity in 451 aa overlap
NP_561284.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561285.1	similar to pir:H69898 hypothetical protein yobI from Bacillus subtilis (1201 aa); 28% identity in 1236 aa overlap. ATC start.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_561286.1	similar to pir:A42400 probable transcription regulator msmR from Streptococcus mutans (278 aa); 32.8% identity in 271 aa overlap; AraC/XylS family
NP_561287.1	similar to gpu:AP001513_137 BH1864 gene product from Bacillus halodurans (461 aa); 30.2% identity in 420 aa overlap
NP_561288.1	similar to gpu:AP001513_138 sugar transport system (permease) (binding protein dependent transporter) from Bacillus halodurans (309 aa); 35.1% identity in 291 aa overlap. 6  transmembrane regions were found by PSORT.; permease
NP_561289.1	similar to pir:A56641 probable membrane transport protein from Clostridium perfringens (275 aa); 68.5% identity in 251 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_561290.1	similar to gp:AF038547_4 alpha-galactosidase (EC 3.2.1.22) (melibiase) from Bacillus stearothermophilus (743 aa); 52.4% identity in 735 aa overlap
NP_561291.1	similar to gpu:AB038772_1 endo-beta-galactosidase C from Clostridium perfringens (845 aa); 97.2% identity in 832 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561292.1	no significant homology.
NP_561293.1	similar to gpu:AP001518_225 BH3394 gene product from Bacillus halodurans (186 aa); 25% identity in 180 aa overlap; TetR/AcrR family
NP_561294.1	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever
NP_561295.1	similar to gp:SC7A8_2  ABC transporter from Streptomyces coelicolor A3(2) (577 aa); 39.1% identity in 575 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.; ATP-binding protein
NP_561296.1	similar to gp:SC7A8_3  ABC transporter from Streptomyces coelicolor A3(2) (642 aa); 46.1% identity in 532 aa overlap.  N-terminal signal sequence and 6 transmembrane regions were found by PSORT.; ATP-binding protein
NP_561297.1	similar to pir:H72370 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (284 aa); 27.4% identity in 124 aa overlap
NP_561298.1	similar to sp:YNGE_CLOPE HYPOTHETICAL PROTEIN IN NAGH 3'REGION (ORFE) (FRAGMENT) from Clostridium perfringens (88 aa); 100% identity in 87 aa overlap. Also similar to gp:CLOLYC_1 autolytic lysozyme from Clostridium acetobutylicum
NP_561299.1	similar to sp:YNGD_CLOPE HYPOTHETICAL 14.9 KDA PROTEIN IN NAGH 3'REGION (ORFD) from Clostridium perfringens (132 aa); 78.1% identity in 128 aa overlap. N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561300.1	similar to pir:A70081 conserved hypothetical protein yxkH from Bacillus subtilis (279 aa); 31.1% identity in 254 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561301.1	similar to sp:Y325_THEMA HYPOTHETICAL OXIDOREDUCTASE TM0325 (EC 1.-.-.-) from Thermotoga maritima (251 aa); 39.9% identity in 263 aa overlap
NP_561302.1	similar to gpu:AP001515_128 transcriptional regulator (GntR family) from Bacillus halodurans (242 aa); 27.2% identity in 217 aa overlap; GntR family
NP_561303.1	similar to sp:UDP_TREPA URIDINE PHOSPHORYLASE (EC 2.4.2.3) (UDRPASE) from Treponema pallidum (258 aa); 54.2% identity in 249 aa overlap. 1  transmembrane region was found by PSORT
NP_561304.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
NP_561305.1	similar to gpu:AP002548_234 arginine/ornithine antiporter from Chlamydophila pneumoniae (481 aa); 48.7% identity in 456 aa overlap.  N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561306.1	similar to pir:DCCLHP histidine decarboxylase (EC 4.1.1.22) precursor from Clostridium perfringens (320 aa); 99.7% identity in 320 aa overlap
NP_561307.1	similar to pir:D69860 probable phosphoesterase (EC 3.1.-.-) ykoQ from Bacillus subtilis (270 aa); 28.8% identity in 271 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561308.1	no significant homology.
NP_561309.1	similar to sp:YKWC_BACSU HYPOTHETICAL 30.7 KDA PROTEIN IN MCPC-KINA INTERGENIC REGION from Bacillus subtilis (288 aa); 51.7% identity in 286 aa overlap. Also similar to many dehydrogenases
NP_561310.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
NP_561311.1	catalyzes the formation of oxaloacetate from L-aspartate
NP_561312.1	similar to pir:B70375 quinolinate phosphoribosyl transferase (EC 2.4.2.19) from Aquifex aeolicus (274 aa); 55.7% identity in 273 aa overlap
NP_561313.1	similar to sp:YCPX_CLOPE HYPOTHETICAL PROTEIN IN CPE 5'REGION (FRAGMENT) from Clostridium perfringens (311 aa); 88.2% identity in 306 aa overlap. Also similar to many permeases. 11  transmembrane regions were found by PSORT.
NP_561314.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
NP_561315.1	similar to pir:E83401 probable transporter PA1958 from Pseudomonas aeruginosa (191 aa); 23.6% identity in 178 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561316.1	no significant homology.
NP_561317.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561318.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561319.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_561320.1	similar to pir:C69596 branched-chain amino acid transporter braB from Bacillus subtilis (445 aa); 44.5% identity in 418 aa overlap.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_561321.1	similar to gp:LSEXOGC_5 L.sake gene cluster from Lactobacillus sakei (283 aa); 43.4% identity in 274 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561322.1	similar to pir:G70034 reticuline oxidase homolog yvdP from Bacillus subtilis (447 aa); 30.6% identity in 451 aa overlap
NP_561323.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_561324.1	similar to gpu:AP001513_19 BH1746 gene product from Bacillus halodurans (282 aa); 36.2% identity in 271 aa overlap
NP_561325.1	similar to pir:E72254 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (479 aa); 43.9% identity in 467 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561326.1	similar to gp:CPIS1136_1 C.perfringens IS1136 DNA from Clostridium perfringens (122 aa); 65.6% identity in 125 aa overlap; IS1136
NP_561327.1	partially similar to pir:C75218 probable monooxygenase PAB0184 from Pyrococcus abyssi (strain Orsay) (407 aa); 26.3% identity in 259 aa overlap. 1 transmembrane region was found by PSORT
NP_561328.1	similar to pir:F32057 hypothetical protein 2 from Azotobacter vinelandii (183 aa); 33.3% identity in 123 aa overlap
NP_561329.1	similar to pir:F69993 carbonic anhydrase homolog ytiB from Bacillus subtilis (187 aa); 57.7% identity in 182 aa overlap
NP_561330.1	no significant homology.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561331.1	no significant homology.
NP_561332.1	molecular chaperone
NP_561333.1	similar to sp:MALR_STRPN MALTOSE OPERON TRANSCRIPTIONAL REPRESSOR from Streptococcus pneumoniae (327 aa); 39.4% identity in 310 aa overlap; LacI family
NP_561334.1	similar to gp:BACEA14G_1 exo-alpha-1,4-glucosidase from Bacillus stearothermophilus (555 aa); 62.3% identity in 551 aa overlap
NP_561335.1	similar to gp:SMU78600_1  ptsG protein from Streptococcus mutans (409 aa); 51.1% identity in 266 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.; glucose-specific enzyme IIA component
NP_561336.1	some similarity to pir:T37061 probable secreted protein from Streptomyces coelicolor (279 aa); 23.9% identity in 176 aa overlap
NP_561337.1	similar to pir:F69961 glycerophosphodiester phosphodiesterase homolog yqiK from Bacillus subtilis (243 aa); 37% identity in 235 aa overlap
NP_561338.1	similar to sp:YIHN_ECOLI HYPOTHETICAL 46.3 KDA PROTEIN IN GLNA-RBN INTERGENIC REGION (O421) from Escherichia coli (421 aa); 37.5% identity in 408 aa overlap
NP_561339.1	similar to gpu:AP001509_86 ATP-dependent DNA helicase from Bacillus halodurans (747 aa); 30.3% identity in 478 aa overlap
NP_561340.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
NP_561341.1	partially similar to gp:CLOTETP_1 Clostridium perfringens tetracycline resistance protein (tetA(P) and tetB(P)) genes, complete cds's, and three unidentified coding regions from Clostridium perfringens (102 aa); 60.8% identity in 102 aa overlap
NP_561342.1	similar to gpu:AP001509_228 BH0790 gene product from Bacillus halodurans (454 aa); 52.8% identity in 396 aa overlap
NP_561343.1	no significant homology.
NP_561344.1	no significant homology.
NP_561345.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_561346.1	similar to sp:LEPU_BACSU SIGNAL PEPTIDASE I U (EC 3.4.21.89) (SPASE I) (LEADER PEPTIDASE I) from Bacillus subtilis (187 aa); 35% identity in 143 aa overlap. N-terminal signal sequence was found by PSORT. transmembrane region was found by PSORT
NP_561347.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561348.1	similar to gpu:AE004250_8 beta-ketoadipate enol-lactone hydrolase,  from Vibrio cholerae (272 aa); 34.5% identity in 252 aa overlap
NP_561349.1	partially similar to sp:Y164_METJA HYPOTHETICAL PROTEIN MJ0164 from Methanococcus jannaschii (395 aa); 29.5% identity in 234 aa overlap
NP_561350.1	no significant homology.
NP_561351.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561352.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561353.1	similar to gp:AF051356_4  hemolysin from Streptococcus mutans (445 aa); 32.8% identity in 412 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561354.1	similar to pir:S74691 iron transport protein from Synechocystis sp. (strain PCC 6803) (360 aa); 37% identity in 338 aa overlap; iron-binding protein
NP_561355.1	similar to pir:E81435 probable iron-uptake ABC transport system permease Cj0174c from Campylobacter jejuni (strain NCTC 11168) (538 aa); 34.6% identity in 529 aa overlap.  N-terminal signal sequence and 10 transmembrane regions were found by PSORT.; permease
NP_561356.1	similar to gpu:AP001508_235 ABC transporter (ATP-binding protein) from Bacillus halodurans (349 aa); 46.7% identity in 225 aa overlap; ATP-binding protein
NP_561357.1	similar to gp:MBHRDED_1 hypothetical protein from Methanosarcina barkeri (225 aa); 43.9% identity in 198 aa overlap
NP_561358.1	no significant homology.
NP_561359.1	similar to gpu:AP001509_89 transcriptional regulator (GntR family) from Bacillus halodurans (123 aa); 58.2% identity in 122 aa overlap; GntR family
NP_561360.1	similar to gpu:AP001509_90 ABC transporter (ATP-binding protein) from Bacillus halodurans (288 aa); 46.9% identity in 286 aa overlap; ATP-binding protein
NP_561361.1	no significant homology.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561362.1	no significant homology.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561363.1	similar to sp:LGUL_HAEIN LACTOYLGLUTATHIONE LYASE (EC 4.4.1.5) (METHYLGLYOXALASE) (ALDOKETOMUTASE) (GLYOXALASE I) (GLX I) (KETONE-ALDEHYDE MUTASE) (S-D-LACTOYLGLUTATHIONE METHYLGLYOXAL LYASE) from Haemophilus influenzae (135 aa); 47.5% identity in 122 aa overlap
NP_561364.1	similar to gp:AE001762_11 transcriptional regulator,  from Thermotoga maritima (299 aa); 26.4% identity in 239 aa overlap; AraC/XylS family
NP_561365.1	similar to sp:ADH2_ECOLI PROBABLE ALCOHOL DEHYDROGENASE (EC 1.1.1.1) from Escherichia coli (383 aa); 63.8% identity in 378 aa overlap
NP_561366.1	no significant homology.
NP_561367.1	similar to sp:YWKD_BACSU HYPOTHETICAL 14.8 KDA PROTEIN IN TDK-PRFA INTERGENIC REGION from Bacillus subtilis (128 aa); 64.3% identity in 126 aa overlap
NP_561368.1	partially similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 31.5% identity in 130 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561369.1	similar to gpu:AP001519_11 transcriptional regulator of multidrug-efflux transporter genes from Bacillus halodurans (271 aa); 33.8% identity in 240 aa overlap; MerR family
NP_561370.1	no significant homology.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561371.1	similar to N-terminal of sp:APL_LACLC ALKALINE PHOSPHATASE LIKE PROTEIN from Lactococcus lactis (242 aa); 30.5% identity in 154 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561372.1	no significant homology.
NP_561373.1	similar to gpu:AP001511_42 two-component response regulator from Bacillus halodurans (232 aa); 55.7% identity in 230 aa overlap
NP_561374.1	similar to gpu:AP001511_43 BH1154 gene product from Bacillus halodurans (750 aa); 29.8% identity in 652 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561375.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561376.1	partially similar to gpu:AE004017_3 conserved hypothetical protein from Xylella fastidiosa (740 aa); 29.8% identity in 171 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561377.1	similar to gpu:AP001519_184 capsular polysaccharide biosynthesis from Bacillus halodurans (232 aa); 19.5% identity in 215 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561378.1	similar to gpu:AP001519_183 capsular polysaccharide biosynthesis from Bacillus halodurans (235 aa); 52.1% identity in 188 aa overlap
NP_561379.1	similar to gp:AF155805_2 Cps9E from Streptococcus suis (608 aa); 43.4% identity in 588 aa overlap. N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561380.1	similar to pir:F70037 spore coat polysaccharide biosynthesis homolog yvfE from Bacillus subtilis (301 aa); 57.3% identity in 286 aa overlap. Also similar to many aminotransferases
NP_561381.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561382.1	no significant homology.
NP_561383.1	some similarity to gpu:AP001508_4 ABC transporter (ATP-binding protein) from Bacillus halodurans (213 aa); 22.8% identity in 123 aa overlap. 1  transmembrane region was found by PSORT
NP_561384.1	no significant homology.
NP_561385.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561386.1	no significant homology.
NP_561387.1	no significant homology.
NP_561388.1	similar to pir:F75142 abc transporter ATP-binding protein PAB2148 from Pyrococcus abyssi (strain Orsay) (580 aa); 24.7% identity in 547 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.; ATP-binding protein
NP_561389.1	similar to pir:T44837 probable UDP-galactose phosphate transferase from Acinetobacter lwoffii (203 aa); 55.1% identity in 196 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561390.1	similar to pir:E70037 serine O-acetyltransferase homolog yvfD from Bacillus subtilis (216 aa); 33.2% identity in 214 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561391.1	similar to pir:C70036 capsular polysaccharide biosynthesis homolog yveN from Bacillus subtilis (381 aa); 34.4% identity in 369 aa overlap
NP_561392.1	similar to pir:F70441 capsular polysaccharide biosynthsis protein from Aquifex aeolicus (316 aa); 31.2% identity in 202 aa overlap
NP_561393.1	similar to pir:S51262 probable beta-glycosyltransferase trsC from Yersinia enterocolitica (292 aa); 33.3% identity in 258 aa overlap. 1 transmembrane region was found by PSORT
NP_561394.1	similar to pir:F70036 capsular polysaccharide biosynthesis homolog yveQ from Bacillus subtilis (367 aa); 34.6% identity in 286 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561395.1	similar to pir:E70036 capsular polysaccharide biosynthesis homolog yveP from Bacillus subtilis (384 aa); 33.2% identity in 368 aa overlap. 2  transmembrane regions were found by PSORT.
NP_561396.1	similar to pir:F70441 capsular polysaccharide biosynthsis protein from Aquifex aeolicus (316 aa); 30.8% identity in 201 aa overlap
NP_561397.1	similar to pir:T50039 beta-1,4-galactosyltransferase cps14J from Streptococcus pneumoniae (318 aa); 34.5% identity in 310 aa overlap
NP_561398.1	similar to pir:T50042 hypothetical protein tasA from Streptococcus pneumoniae (359 aa); 39.7% identity in 317 aa overlap
NP_561399.1	similar to pir:A70419 glycerol-3-phosphate cytidyltransferase from Aquifex aeolicus (168 aa); 46% identity in 139 aa overlap
NP_561400.1	similar to gp:AF155804_7 Cps1K from Streptococcus suis (279 aa); 42.4% identity in 231 aa overlap. N-terminal signal sequence was found by PSORT
NP_561401.1	similar to pir:F70441 capsular polysaccharide biosynthsis protein from Aquifex aeolicus (316 aa); 34.4% identity in 221 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561402.1	similar to gp:AF143904_1  galactosyl transferase from Actinobacillus pleuropneumoniae (383 aa); 26.5% identity in 351 aa overlap
NP_561403.1	partially similar to pir:T48446 hypothetical protein T32M21.100 from Arabidopsis thaliana (764 aa); 33.6% identity in 238 aa overlap
NP_561404.1	similar to pir:F70441 capsular polysaccharide biosynthsis protein from Aquifex aeolicus (316 aa); 31.3% identity in 179 aa overlap. 1  transmembrane region was found by PSORT
NP_561405.1	similar to gp:AF048749_8  flippase from Bacteroides fragilis (511 aa); 26.8% identity in 459 aa overlap. N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561406.1	similar to gpu:AF244637_1 hypothetical protein from Carboxydothermus hydrogenoformans (162 aa); 33.9% identity in 109 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561407.1	similar to pir:F70066 capsular polysaccharide biosynthesis homolog ywqC from Bacillus subtilis (248 aa); 31% identity in 232 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561408.1	similar to pir:G70066 capsular polysaccharide biosynthesis homolog ywqD from Bacillus subtilis (237 aa); 44.1% identity in 213 aa overlap
NP_561409.1	similar to C-terminal of prf:2512318F Cps2E protein from Streptococcus pneumoniae (455 aa); 47% identity in 198 aa overlap. 1  transmembrane region was found by PSORT
NP_561410.1	similar to pir:G59102 hypothetical protein pXO1-95 from Bacillus anthracis virulence plasmid pXO1 (443 aa); 52.8% identity in 445 aa overlap.Also similar to pir:A70067 NDP-sugar dehydrogenase homolog ywqF from Bacillus subtilis
NP_561411.1	similar to pir:H70352 mannose-6-phosphate isomerase/mannose-1-phosphate guanyl transferase from Aquifex aeolicus (453 aa); 37.2% identity in 339 aa overlap
NP_561412.1	similar to prf:2518331F   ManNAc transferase from Streptococcus pneumoniae (247 aa); 32.4% identity in 241 aa overlap
NP_561413.1	similar to N-terminal of pir:B71691 capm protein (capM1) RP344 from Rickettsia prowazekii (389 aa); 26.8% identity in 138 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing)
NP_561414.1	similar to C-terminal of pir:F64500 probable hexosyltransferase (EC 2.4.1.-) MJ1607 from Methanococcus jannaschii (390 aa); 27.8% identity in 209 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing)
NP_561415.1	similar to C-terminal of pir:A75059 probable hexosyltransferase (EC 2.4.1.-) PAB0973 from Pyrococcus abyssi (strain Orsay) (390 aa); 39% identity in 141 aa overlap
NP_561416.1	similar to sp:YC08_KLEPN HYPOTHETICAL 42.6 KDA PROTEIN IN CPS REGION (ORF8) from Klebsiella pneumoniae (373 aa); 28.6% identity in 399 aa overlap
NP_561417.1	similar to gp:AF155804_7 Cps1K from Streptococcus suis (279 aa); 39.7% identity in 229 aa overlap
NP_561418.1	similar to gpu:AP001519_178 lipopolysaccharide biosynthesis from Bacillus halodurans (373 aa); 28.6% identity in 360 aa overlap
NP_561419.1	no significant homology.  N-terminal signal sequence and 12  transmembrane regions were found by PSORT.
NP_561420.1	similar to pir:G70036 spore coat polysaccharide biosynthesis homolog yveR from Bacillus subtilis (344 aa); 32.8% identity in 262 aa overlap. 1  transmembrane region was found by PSORT
NP_561421.1	similar to gp:AF048749_8  flippase from Bacteroides fragilis (511 aa); 28% identity in 443 aa overlap. N-terminal signal sequence and 12  transmembrane regions were found by PSORT.
NP_561422.1	similar to gpu:AP001519_167 UTP-glucose-1-phosphate uridylyltransferase from Bacillus halodurans (297 aa); 60.1% identity in 288 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561423.1	no significant homology.
NP_561424.1	no significant homology.
NP_561425.1	similar to sp:GALE_BACSU UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2) (GALACTOWALDENASE) (UDP- GALACTOSE 4-EPIMERASE) from Bacillus subtilis (339 aa); 58.6% identity in 338 aa overlap
NP_561426.1	similar to gpu:AP001519_167 UTP-glucose-1-phosphate uridylyltransferase from Bacillus halodurans (297 aa); 60.6% identity in 284 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561427.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561428.1	similar to gp:AF130985_1 alpha-galactosidase (EC 3.2.1.22) AgaN from Bacillus stearothermophilus (729 aa); 60.4% identity in 720 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561429.1	similar to gpu:AP001518_125 BH3294 gene product from Bacillus halodurans (254 aa); 35.4% identity in 209 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561430.1	similar to gp:AF085497_1 signal peptidase type I from Bacillus amyloliquefaciens (194 aa); 37.2% identity in 137 aa overlap
NP_561431.1	some similarity to N-terminal of gpu:AP001514_135 spore coat-associated protein from Bacillus halodurans (210 aa); 27.2% identity in 103 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561432.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561433.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561434.1	similar to pir:S60139 virR protein from Clostridium perfringens (252 aa); 31.9% identity in 238 aa overlap
NP_561435.1	similar to pir:C55521 virS protein from Clostridium perfringens (440 aa); 32.5% identity in 234 aa overlap. N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_561436.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561437.1	similar to C-terminal of gpu:AP001507_220 BH0220 gene product from Bacillus halodurans (701 aa); 31.7% identity in 142 aa overlap
NP_561438.1	similar to gpu:AP001507_222 BH0222 gene product from Bacillus halodurans (89 aa); 41.7% identity in 84 aa overlap
NP_561439.1	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
NP_561440.1	similar to gpu:AP001516_88 BH2659 gene product from Bacillus halodurans (257 aa); 29.1% identity in 258 aa overlap
NP_561441.1	similar to gpu:AP001517_194 transcriptional regulator from Bacillus halodurans (151 aa); 24.4% identity in 119 aa overlap; MarR family
NP_561442.1	similar to gp:SC7A8_2  ABC transporter from Streptomyces coelicolor A3(2) (577 aa); 42% identity in 531 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.; ATP-binding protein
NP_561443.1	similar to gp:SC7A8_3  ABC transporter from Streptomyces coelicolor A3(2) (642 aa); 49.2% identity in 594 aa overlap. 5  transmembrane regions were found by PSORT.; ATP-binding protein
NP_561444.1	no significant homology.
NP_561445.1	similar to gp:AF132735_8 malate permease from Clostridium cellulovorans (290 aa); 24% identity in 254 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561446.1	Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes
NP_561447.1	similar to pir:A70009 two-component sensor histidine kinase homolog yufL from Bacillus subtilis (533 aa); 28.7% identity in 492 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561448.1	similar to pir:B70009 two-component response regulator [YufL] homolog yufM from Bacillus subtilis (235 aa); 38.2% identity in 217 aa overlap
NP_561449.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561450.1	no significant homology.
NP_561451.1	similar to pir:F81434 probable integral membrane protein Cj0167c from Campylobacter jejuni (strain NCTC 11168) (187 aa); 43.5% identity in 186 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561452.1	similar to pir:C64895 hypothetical protein b1432 from Escherichia coli (402 aa); 27.9% identity in 305 aa overlap. Also similar to pir:C72305 transposase, IS605-TnpB family from Thermotoga maritima (strain MSB8)
NP_561453.1	similar to gp:CPIS1136_1 C.perfringens IS1136 DNA from Clostridium perfringens (122 aa); 59.3% identity in 91 aa overlap; IS1136
NP_561454.1	no significant homology.
NP_561455.1	similar to sp:4HDB_CLOKL NAD-DEPENDENT 4-HYDROXYBUTYRATE DEHYDROGENASE (EC 1.1.1.61) (4HBD from Clostridium kluyveri (371 aa); 47.2% identity in 371 aa overlap. 1  transmembrane region was found by PSORT
NP_561456.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561457.1	similar to pir:A75167 hypothetical protein PAB0333 from Pyrococcus abyssi (strain Orsay) (259 aa); 24.4% identity in 205 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561458.1	no significant homology.
NP_561459.1	similar to gp:AF051356_3  permease from Streptococcus mutans (364 aa); 27.9% identity in 319 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561460.1	similar to gpu:AE004180_4 proton/peptide symporter family protein from Vibrio cholerae (514 aa); 33.2% identity in 407 aa overlap. 8  transmembrane regions were found by PSORT.
NP_561461.1	no significant homology.
NP_561462.1	no significant homology.
NP_561463.1	similar to C-terminal of pir:C70319 nitrite reductase (NAD(P)H) large subunit from Aquifex aeolicus (1002 aa); 24.8% identity in 452 aa overlap
NP_561464.1	S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
NP_561465.1	similar to sp:DCLY_BACSU LYSINE DECARBOXYLASE (EC 4.1.1.18) (LDC) from Bacillus subtilis (490 aa); 44.1% identity in 479 aa overlap. 1  transmembrane region was found by PSORT
NP_561466.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
NP_561467.1	similar to pir:H70057 agmatinase homolog ywhG from Bacillus subtilis (290 aa); 48% identity in 271 aa overlap
NP_561468.1	similar to pir:G69983 hypothetical protein ysdA from Bacillus subtilis (89 aa); 46.9% identity in 64 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561469.1	similar to sp:NANH_CLOSE SIALIDASE PRECURSOR (EC 3.2.1.18) (NEURAMINIDASE) from Clostridium septicum (1014 aa); 50.9% identity in 953 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561470.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561471.1	similar to sp:ATCU_BACSU POTENTIAL COPPER-TRANSPORTING ATPASE (EC 3.6.1.36) from Bacillus subtilis (803 aa); 51.6% identity in 808 aa overlap. 7 transmembrane regions were found by PSORT.
NP_561472.1	similar to gp:AF112858_1 NAD(P)H dehydrogenase from Bacillus stearothermophilus (211 aa); 35.5% identity in 186 aa overlap
NP_561473.1	similar to gpu:AF249729_1 ATPase OpuCA from Listeria monocytogenes (397 aa); 47.5% identity in 354 aa overlap; ATP-binding protein
NP_561474.1	similar to pir:T44634 choline transporter from Streptococcus pneumoniae (506 aa); 34.7% identity in 502 aa overlap. 7  transmembrane regions were found by PSORT.; osmoprotectant-binding protein
NP_561475.1	similar to sp:SIGV_BACSU RNA POLYMERASE SIGMA FACTOR SIGV from Bacillus subtilis (166 aa); 34.1% identity in 138 aa overlap
NP_561476.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561477.1	similar to gpu:AE004175_1 PTS system, trehalose-specific IIBC component from Vibrio cholerae (478 aa); 52.9% identity in 367 aa overlap. 9 transmembrane regions were found by PSORT.; trehalose-specific IIBC component
NP_561478.1	similar to gp:AF216220_1 alpha-glucosidase from Bacillus sp. DG0303 (562 aa); 62.5% identity in 552 aa overlap
NP_561479.1	similar to sp:TRER_BACSU TREHALOSE OPERON TRANSCRIPTIONAL REPRESSOR from Bacillus subtilis (238 aa); 54.5% identity in 233 aa overlap
NP_561480.1	similar to gpu:AP001516_1 stage V sporulation protein (soprulation specific penicillin-binding protein) (spore cortex) from Bacillus halodurans (644 aa); 38.6% identity in 360 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561481.1	similar to pir:MUBPA7 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from phage T7 (151 aa); 38.7% identity in 119 aa overlap. 1  transmembrane region was found by PSORT; phage related
NP_561482.1	similar to sp:RIBD_ACTPL RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD [INCLUDES: DIAMINOHYDROXYPHOSPHORIBOSYLAMINOPYRIMIDINE DEAMINASE (EC 3.5.4.26) (RIBOFLAVIN-SPECIFIC DEAMINASE) from Actinobacillus pleuropneumoniae (376 aa); 44.8% identity in 357 aa overlap
NP_561483.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
NP_561484.1	similar to gpu:AP001512_143 GTP cyclohydrolase II / 3, 4-dihydroxy-2-butanone 4-phosphate synthase from Bacillus halodurans (404 aa); 63.1% identity in 396 aa overlap
NP_561485.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
NP_561486.1	similar to C-terminal of gp:AF154013_1 surface protein PspC from Streptococcus pneumoniae (730 aa); 52.5% identity in 217 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561487.1	similar to sp:YUGU_BACSU HYPOTHETICAL 16.3 KDA PROTEIN IN TGL-PGI INTERGENIC REGION from Bacillus subtilis (142 aa); 52.8% identity in 125 aa overlap
NP_561488.1	similar to pir:F72407 hypothetical protein from Thermotoga maritima (strain MSB8) (92 aa); 43.8% identity in 80 aa overlap
NP_561489.1	no significant homology.
NP_561490.1	similar to pir:D69796 two-component sensor histidine kinase homolog yesM from Bacillus subtilis (577 aa); 34.3% identity in 327 aa overlap. 1  transmembrane region was found by PSORT
NP_561491.1	similar to gpu:AP001511_12 BH1123 gene product from Bacillus halodurans (526 aa); 25% identity in 516 aa overlap. Also similar to pir:E69796 two-component response regulator [YesM] homolog yesN (368 aa) from Bacillus subtilis
NP_561492.1	similar to pir:T35670 hypothetical protein SC7B7.02 SC7B7.02 from Streptomyces coelicolor (469 aa); 28.7% identity in 397 aa overlap.  N-terminal signal sequence was found by PSORT; binding protein
NP_561493.1	similar to sp:YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEase YURN from Bacillus subtilis (292 aa); 35.6% identity in 267 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_561494.1	similar to pir:T35672 probable transmembrane transport protein from Streptomyces coelicolor (302 aa); 37% identity in 246 aa overlap. 5  transmembrane regions were found by PSORT.; permease
NP_561495.1	similar to sp:YDJZ_ECOLI HYPOTHETICAL 26.2 KDA PROTEIN IN XTHA-GDHA INTERGENIC REGION from Escherichia coli (235 aa); 55.7% identity in 219 aa overlap. N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561496.1	similar to pir:B69313 iron-sulfur binding reductase homolog from Archaeoglobus fulgidus (366 aa); 28% identity in 322 aa overlap
NP_561497.1	similar to sp:Y460_PYRHO HYPOTHETICAL PROTEIN PH0460 from Pyrococcus horikoshii (188 aa); 38.8% identity in 103 aa overlap. 5  transmembrane regions were found by PSORT.
NP_561498.1	similar to gp:SCD84_4 hypothetical protein SCD84.04 from Streptomyces coelicolor A3(2) (206 aa); 32.9% identity in 207 aa overlap
NP_561499.1	similar to gp:SCD84_5 phosphate transport protein from Streptomyces coelicolor A3(2) (332 aa); 44.1% identity in 306 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561500.1	similar to pir:H69626 PTS fructose-specific enzyme IIBC component fruA from Bacillus subtilis (635 aa); 57.1% identity in 627 aa overlap. 7  transmembrane regions were found by PSORT.; fructose-specific enzyme IIBC component
NP_561501.1	similar to sp:K1PF_BACSU 1-PHOSPHOFRUCTOKINASE (EC 2.7.1.56) (FRUCTOSE 1-PHOSPHATE KINASE) from Bacillus subtilis (303 aa); 49.3% identity in 302 aa overlap
NP_561502.1	similar to pir:B69627 transcription repressor of fructose operon fruR from Bacillus subtilis (251 aa); 48.4% identity in 246 aa overlap
NP_561503.1	no significant homology.
NP_561504.1	similar to gp:SPDACAO_1 membrane protein from Streptococcus pneumoniae (369 aa); 29.6% identity in 358 aa overlap
NP_561505.1	similar to pir:C72372 pyrazinamidase/nicotinamidase-related protein from Thermotoga maritima (strain MSB8) (214 aa); 30.2% identity in 159 aa overlap. 1  transmembrane region was found by PSORT
NP_561506.1	similar to pir:T44296 hypothetical protein from Bacillus halodurans (424 aa); 38.3% identity in 420 aa overlap. 5  transmembrane regions were found by PSORT.
NP_561507.1	similar to gpu:AP001516_56 glutaminase from Bacillus halodurans (308 aa); 44.3% identity in 305 aa overlap. 1  transmembrane region was found by PSORT
NP_561508.1	similar to pir:G71281 probable Mg2+ transport protein (mgtC) from Treponema pallidum (224 aa); 29.6% identity in 213 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561509.1	Regulatory factor involved in maltose metabolism
NP_561510.1	similar to C-terminal of gpu:AE004122_1 MutT/nudix family protein from Vibrio cholerae (269 aa); 32.1% identity in 162 aa overlap
NP_561511.1	similar to sp:DCDA_BACSU DIAMINOPIMELATE DECARBOXYLASE (EC 4.1.1.20) (DAP DECARBOXYLASE) from Bacillus subtilis (441 aa); 50.5% identity in 422 aa overlap
NP_561512.1	no significant homology.
NP_561513.1	similar to sp:LEP_PHOLA SIGNAL PEPTIDASE I (EC 3.4.21.89) (SPASE I) (LEADER PEPTIDASE I) from Phormidium laminosum (203 aa); 47.4% identity in 135 aa overlap. N-terminal signal sequence was found by PSORT
NP_561514.1	similar to sp:FTH3_SYNY3 CELL DIVISION PROTEIN FTSH HOMOLOG 3 (EC 3.4.24.-) from Synechocystis sp. (strain PCC 6803) (628 aa); 53.1% identity in 567 aa overlap. N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561515.1	similar to pir:H70040 hypothetical protein yvgS from Bacillus subtilis (774 aa); 30.2% identity in 660 aa overlap
NP_561516.1	similar to sp:YQIX_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER EXTRACELLULAR BINDING PROTEIN YQIX PRECURSOR from Bacillus subtilis (255 aa); 38.3% identity in 256 aa overlap; binding protein
NP_561517.1	similar to pir:A72357 amino acid ABC transporter, permease from Thermotoga maritima (strain MSB8) (216 aa); 44.4% identity in 214 aa overlap. 3  transmembrane regions were found by PSORT.; permease
NP_561518.1	similar to gpu:AP001512_50 ABC transporter (ATP-binding protein) from Bacillus halodurans (240 aa); 65.4% identity in 240 aa overlap; ATP-binding protein
NP_561519.1	similar to pir:A72221 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (593 aa); 39.3% identity in 356 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561520.1	similar to pir:A72221 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (593 aa); 31.4% identity in 519 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561521.1	similar to pir:H75109 cation efflux system protein (zinc/cadmium) PAB0462 from Pyrococcus abyssi (strain Orsay) (283 aa); 30.9% identity in 272 aa overlap. 6 transmembrane regions were found by PSORT.
NP_561522.1	multiple regions are similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 33.6% identity in 211 aa overlap. Also similar to many N-acetylmuramoyl-L alanine amidases.  N-terminal signal sequence was found by PSORT
NP_561523.1	catalyzes the removal of amino acids from the N termini of peptides
NP_561524.1	no significant homology.
NP_561525.1	similar to gpu:AP001508_220 BH0497 gene product from Bacillus halodurans (247 aa); 35% identity in 277 aa overlap
NP_561526.1	similar to sp:YDGH_BACSU  MEMBRANE PROTEIN YDGH from Bacillus subtilis (885 aa); 28.4% identity in 684 aa overlap.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_561527.1	similar to sp:RF3_SYNY3 PEPTIDE CHAIN RELEASE FACTOR 3 (RF-3) from Synechocystis sp. (strain PCC 6803) (547 aa); 52.1% identity in 511 aa overlap. 1 transmembrane region was found by PSORT
NP_561528.1	no significant homology.
NP_561529.1	similar to gpu:AE004216_3 conserved hypothetical protein from Vibrio cholerae (273 aa); 47.4% identity in 266 aa overlap
NP_561530.1	similar to prf:2312306A undecaprenyl phosphate galactosephosphotransferase from Anabaena sp. (252 aa); 52.8% identity in 195 aa overlap. 1  transmembrane region was found by PSORT
NP_561531.1	similar to sp:RFBN_SALTY  RHAMNOSYLTRANSFERASE RFBN (EC 2.4.1.-) from Salmonella typhimurium (314 aa); 34.9% identity in 304 aa overlap
NP_561532.1	similar to pir:C69106 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) from Methanobacterium thermoautotrophicum (292 aa); 65.2% identity in 287 aa overlap. 1  transmembrane region was found by PSORT
NP_561533.1	similar to pir:B69106 dTDP-4-dehydrorhamnose 3,5-epimerase from Methanobacterium thermoautotrophicum (strain Delta H) (185 aa); 59.4% identity in 180 aa overlap
NP_561534.1	similar to pir:D69106 dTDP-4-dehydrorhamnose reductase from Methanobacterium thermoautotrophicum (strain Delta H) (280 aa); 40% identity in 290 aa overlap
NP_561535.1	similar to pir:H69105 dTDP-glucose 4,6-dehydratase from Methanobacterium thermoautotrophicum (strain Delta H) (336 aa); 56% identity in 348 aa overlap
NP_561536.1	no significant homology.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_561537.1	similar to gpu:AP001519_228 glycosyltransferase from Bacillus halodurans (303 aa); 26.2% identity in 221 aa overlap
NP_561538.1	pertially similar to gp:AB038490_1 fukutin from Homo sapiens (461 aa); 28.9% identity in 187 aa overlap. Also partially similar to gp:AF052516_2 hemolysin erythrocyte lysis protein from Provotella intermedia
NP_561539.1	similar to gp:AF106539_1 unknown from Streptococcus pneumoniae (495 aa); 30.2% identity in 473 aa overlap. N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561540.1	partially similar to gp:AF154026_1 surface protein PspC from Streptococcus pneumoniae (752 aa); 42.5% identity in 214 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561541.1	partially similar to gp:AF154026_1 surface protein PspC from Streptococcus pneumoniae (752 aa); 43.4% identity in 272 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561542.1	partially similar to pir:A41971 surface protein pspA precursor from Streptococcus pneumoniae (619 aa); 46.3% identity in 203 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561543.1	C-terminal region is highly similar to gp:AF036951_1 choline kinase from Streptococcus pneumoniae (262 aa); 43.8% identity in 258 aa overlap
NP_561544.1	similar to sp:LICB_HAEIN LICB PROTEIN from Haemophilus influenzae Rd (292 aa); 33.3% identity in 300 aa overlap. 7  transmembrane regions were found by PSORT.
NP_561545.1	similar to sp:LICC_HAEIN LICC PROTEIN from Haemophilus influenzae Rd (233 aa); 35.3% identity in 221 aa overlap
NP_561546.1	partially similar to gp:AF154026_1 surface protein PspC from Streptococcus pneumoniae (752 aa); 49.4% identity in 233 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561547.1	similar to gp:EFA276231_1 PSR protein from Enterococcus faecalis (390 aa); 31.3% identity in 272 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561548.1	similar to gp:CLOSERTRNA_2 sodium-coupled branched-chain amino acid carrier from Clostridium perfringens (338 aa); 34.3% identity in 335 aa overlap. N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561549.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_561550.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561551.1	anSME; radical SAM enzyme; oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates
NP_561552.1	similar to gpu:AE004350_3 phosphate ABC transporter, periplasmic phosphate-binding protein from Vibrio cholerae (299 aa); 48.3% identity in 230 aa overlap.  N-terminal signal sequence was found by PSORT; binding protein
NP_561553.1	similar to gpu:AE004350_3 phosphate ABC transporter, periplasmic phosphate-binding protein from Vibrio cholerae (299 aa); 48.8% identity in 240 aa overlap; binding protein
NP_561554.1	similar to gpu:AE004350_4 phosphate ABC transporter, permease from Vibrio cholerae (327 aa); 54.3% identity in 278 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_561555.1	similar to gpu:AE004350_5 phosphate ABC transporter, permease from Vibrio cholerae (289 aa); 53.1% identity in 273 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_561556.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
NP_561557.1	similar to pir:B70378 transcription regulator PhoU-like from Aquifex aeolicus (221 aa); 35% identity in 206 aa overlap
NP_561558.1	similar to pir:D72228 response regulator DrrA from Thermotoga maritima (strain MSB8) (247 aa); 50.6% identity in 231 aa overlap
NP_561559.1	no significant homology.
NP_561560.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
NP_561561.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_561562.1	no significant homology.
NP_561563.1	no significant homology.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561564.1	similar to gpu:AP001513_207 spore germination protein KA from Bacillus halodurans (515 aa); 36.2% identity in 425 aa overlap. 7  transmembrane regions were found by PSORT.
NP_561565.1	similar to pir:S38904 hypothetical protein 2 from Clostridium pasteurianum (383 aa); 20.8% identity in 342 aa overlap
NP_561566.1	N-terminal region is similar to gp:AF150930_5 unknown from Thermoanaerobacter ethanolicus (169 aa); 54.3% identity in 164 aa overlap
NP_561567.1	no significant homology.
NP_561568.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
NP_561569.1	similar to pir:F75433 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (242 aa); 36.1% identity in 230 aa overlap
NP_561570.1	similar to gpu:AP001516_278 GTP pyrophosphokinase from Bacillus halodurans (211 aa); 57.1% identity in 205 aa overlap
NP_561571.1	no significant homology.
NP_561572.1	similar to pir:B72315 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (351 aa); 26.6% identity in 365 aa overlap
NP_561573.1	similar to sp:Y929_THEMA HYPOTHETICAL PROTEIN TM0929 from Thermotoga maritima (strain MSB8) (397 aa); 27.4% identity in 347 aa overlap
NP_561574.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561575.1	similar to sp:YJJI_HAEIN HYPOTHETICAL PROTEIN HI0521 from Haemophilus influenzae (strain Rd KW20) (514 aa); 46.9% identity in 499 aa overlap
NP_561576.1	similar to sp:YJJW_ECOLI HYPOTHETICAL 31.5 KDA PROTEIN IN OSMY-DEOC INTERGENIC REGION (F287) from Escherichia coli (287 aa); 40.8% identity in 206 aa overlap
NP_561577.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561578.1	partially similar to pir:B70374 conserved hypothetical protein aq_854 from Aquifex aeolicus (545 aa); 29.3% identity in 208 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561579.1	similar to gpu:AE003864_7 hypothetical protein from Xylella fastidiosa (460 aa); 20.5% identity in 414 aa overlap
NP_561580.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561581.1	no significant homology.
NP_561582.1	similar to pir:F75335 probable transposase from Deinococcus radiodurans (strain R1) (140 aa); 56.9% identity in 58 aa overlap. Probably truncated
NP_561583.1	similar to N-terminal of pir:JC4292 probable transposase from thermophilic bacterium PS-3 (369 aa); 37.7% identity in 106 aa overlap. Probably truncated; IS13
NP_561584.1	similar to gp:CDI131844_3  transposase from Clostridium difficile (408 aa); 47.4% identity in 270 aa overlap
NP_561585.1	pertially similar to gp:AF047005_1 asparagine-rich protein from Plasmodium falciparum (728 aa); 28% identity in 236 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561586.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
NP_561587.1	similar to pir:T36466 mutT domain-containing protein from Streptomyces coelicolor (204 aa); 25.6% identity in 129 aa overlap
NP_561588.1	no significant homology.
NP_561589.1	similar to sp:BIRA_BACSU BIRA BIFUNCTIONAL PROTEIN [INCLUDES: BIOTIN OPERON REPRESSOR; BIOTIN-[ACETYL-COA-CARBOXYLASE] SYNTHETASE (EC 6.3.4.15) (BIOTIN-PROTEIN LIGASE)] from Bacillus subtilis (325 aa); 32.9% identity in 322 aa overlap
NP_561590.1	partially similar to pir:F75357 hypothetical protein from Deinococcus radiodurans (strain R1) (328 aa); 26% identity in 181 aa overlap.Also similar to many DNA helicases
NP_561591.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561592.1	no significant homology. 5  transmembrane regions were found by PSORT.
NP_561593.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561594.1	similar to sp:DUT_CHLPN DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (EC 3.6.1.23) (DUTPASE) (DUTP PYROPHOSPHATASE) from Chlamydophila pneumoniae (strains CWL029 and AR39) (145 aa); 47.3% identity in 91 aa overlap
NP_561595.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
NP_561596.1	similar to pir:G81961 phosphoribosylformylglycinamidine synthase (EC 6.3.5.3) NMA0445 from Neisseria meningitidis (group A strain Z2491) (1320 aa); 25.6% identity in 1056 aa overlap. 1 transmembrane region was found by PSORT
NP_561597.1	Catalyzes a step in the de novo purine nucleotide biosynthetic pathway
NP_561598.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
NP_561599.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
NP_561600.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
NP_561601.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
NP_561602.1	involved in de novo purine biosynthesis
NP_561603.1	similar to sp:PUR2_AQUAE PHOSPHORIBOSYLAMINE-GLYCINE LIGASE (EC 6.3.4.13) (GARS) (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE) (PHOSPHORIBOSYLGLYCINAMIDE SYNTHETASE) from Aquifex aeolicus (424 aa); 51.3% identity in 413 aa overlap
NP_561604.1	similar to gpu:AE004430_11 conserved hypothetical protein from Vibrio cholerae (143 aa); 47.4% identity in 116 aa overlap.  N-terminal signal sequence and 3 transmembrane regions were found by PSORT.
NP_561605.1	similar to sp:Y746_METJA HYPOTHETICAL PROTEIN MJ0746 from Methanococcus jannaschii (141 aa); 43.4% identity in 143 aa overlap
NP_561606.1	catalyzes the formation of arginine from (N-L-arginino)succinate
NP_561607.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
NP_561608.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
NP_561609.1	similar to pir:T29435 hypothetical protein SC3A7.16c from Streptomyces coelicolor (1361 aa); 30.7% identity in 1024 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561610.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
NP_561611.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
NP_561612.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
NP_561613.2	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
NP_561614.1	similar to N-terminal of sp:PHEA_AQUAE P-PROTEIN [INCLUDES: CHORISMATE MUTASE (EC 5.4.99.5) (CM) from Aquifex aeolicus (362 aa); 30.1% identity in 93 aa overlap
NP_561615.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561616.1	similar to gpu:AP001511_213 shikimate 5-dehydrogenase from Bacillus halodurans (278 aa); 40.6% identity in 256 aa overlap
NP_561617.1	similar to sp:AROK_AQUAE SHIKIMATE KINASE (EC 2.7.1.71) (SK) from Aquifex aeolicus (168 aa); 37% identity in 154 aa overlap
NP_561618.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
NP_561619.1	no significant homology.
NP_561620.1	similar to sp:R14H_BACSH 30S RIBOSOMAL PROTEIN S14 HOMOLOG from Bacillus sphaericus (109 aa); 46.7% identity in 107 aa overlap
NP_561621.1	no significant homology. 6  transmembrane regions were found by PSORT.
NP_561622.1	no significant homology.
NP_561623.1	similar to gp:AF084104_17 NatA from Bacillus firmus (299 aa); 43.3% identity in 293 aa overlap; ATP-binding protein
NP_561624.1	similar to sp:YHAP_BACSU HYPOTHETICAL 45.4 KDA PROTEIN IN SSPB-PRSA INTERGENIC REGION from Bacillus subtilis (419 aa); 30.7% identity in 394 aa overlap. 6 transmembrane regions were found by PSORT.
NP_561625.1	similar to sp:CBH_CLOPE CHOLOYLGLYCINE HYDROLASE (EC 3.5.1.24) (CONJUGATED BILE ACID HYDROLASE) (CBAH) (BILE SALT HYDROLASE) from Clostridium perfringens (329 aa); 100% identity in 273 aa overlap
NP_561626.1	similar to gpu:AP001518_182 transcriptional regulator (Lrp/AsnC family) from Bacillus halodurans (164 aa); 52.3% identity in 153 aa overlap; Lrp/AsnC family
NP_561627.1	similar to gpu:AP001518_181 aspartate aminotransferase from Bacillus halodurans (393 aa); 54.3% identity in 376 aa overlap
NP_561628.1	no significant homology.
NP_561629.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561630.1	similar to gp:SAY14370_3 ypfP gene product from Staphylococcus aureus (391 aa); 28.3% identity in 364 aa overlap
NP_561631.1	similar to gpu:AE004201_8 conserved hypothetical protein from Vibrio cholerae (161 aa); 34.9% identity in 83 aa overlap
NP_561632.1	similar to gpu:AP001514_32 RNA polymerase ECF-type sigma factor from Bacillus halodurans (179 aa); 32.1% identity in 159 aa overlap
NP_561633.1	some similarity to gpu:AP001520_227 BH4003 gene product from Bacillus halodurans (264 aa); 30.6% identity in 173 aa overlap. 1  transmembrane region was found by PSORT
NP_561634.1	similar to pir:A71213 truncated alanine-tRNA ligase homolog PH1969 from Pyrococcus horikoshii (404 aa); 28.2% identity in 358 aa overlap
NP_561635.1	similar to prf:2315479K   epsG gene from Lactococcus lactis (316 aa); 31.8% identity in 255 aa overlap
NP_561636.1	similar to pir:G70007 conserved hypothetical protein yueF from Bacillus subtilis (369 aa); 25.2% identity in 349 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561637.1	similar to pir:F81444 probable integral membrane protein Cj0263 from Campylobacter jejuni (strain NCTC 11168) (291 aa); 45.6% identity in 274 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561638.1	similar to gpu:AP001512_140 transcriptional regulator (DeoR family) from Bacillus halodurans (251 aa); 33.6% identity in 238 aa overlap; DeoR family
NP_561639.1	similar to sp:YBIV_ECOLI HYPOTHETICAL 30.4 KDA PROTEIN IN OMPX-MOEB INTERGENIC REGION from Escherichia coli (271 aa); 37.1% identity in 259 aa overlap
NP_561640.1	similar to sp:SPL_BACSU SPORE PHOTOPRODUCT LYASE (EC 4.1.99.-) from Bacillus subtilis (199 aa); 91.5% identity in 199 aa overlap. Also similar to pir:I40865 hypothetical protein 1 from Clostridium perfringens
NP_561641.1	similar to pir:I40866 exo-alpha-sialidase (EC 3.2.1.18) from Clostridium perfringens (694 aa); 99.7% identity in 694 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561642.1	similar to pir:I40867 hypothetical protein 2 from Clostridium perfringens (384 aa); 96.1% identity in 384 aa overlap
NP_561643.1	similar to pir:I40868 hypothetical protein 3 nanH region from Clostridium perfringens (265 aa); 68.3% identity in 265 aa overlap. 3  transmembrane regions were found by PSORT.
NP_561644.1	similar to pir:I40869 hypothetical protein 4 nanH region from Clostridium perfringens (190 aa); 97.6% identity in 84 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing)
NP_561645.1	similar to pir:I40869 hypothetical protein 4 nanH region from Clostridium perfringens (190 aa); 97.1% identity in 103 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing)
NP_561646.1	similar to sp:YIAC_ECOLI HYPOTHETICAL 17.1 KDA PROTEIN IN TAG-BISC INTERGENIC REGION. from Escherichia coli (146 aa); 36% identity in 139 aa overlap
NP_561647.1	no significant homology.
NP_561648.1	similar to pir:H69339 conserved hypothetical protein AF0720 from Archaeoglobus fulgidus (214 aa); 38.5% identity in 213 aa overlap
NP_561649.1	similar to sp:YC30_ODOSI HYPOTHETICAL TRANSCRIPTIONAL REGULATOR YCF30 from Odontella sinensis chloroplast (309 aa); 29% identity in 262 aa overlap; LysR family
NP_561650.1	similar to gpu:AE004394_5 NADH oxidase,  from Vibrio cholerae (567 aa); 43% identity in 530 aa overlap. N-terminal signal sequence was found by PSORT
NP_561651.1	partially similar to pir:D82968 hypothetical protein PA5430 from Pseudomonas aeruginosa (strain PAO1) (404 aa); 25.5% identity in 314 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561652.1	similar to gpu:AP001510_169 BH0994 gene product from Bacillus halodurans (395 aa); 24.9% identity in 369 aa overlap.  N-terminal signal sequence and 11 transmembrane regions were found by PSORT.
NP_561653.1	similar to >gp:LMO132543_1 fibronectin-binding protein, 25kDA from Listeria monocytogenes (215 aa); 30.6% identity in 219 aa overlap
NP_561654.1	similar to pir:D69971 conserved hypothetical protein yraL from Bacillus subtilis (87 aa); 47.4% identity in 76 aa overlap
NP_561655.1	similar to pir:B37192 thioredoxin from Bacillus subtilis (104 aa); 56.8% identity in 81 aa overlap
NP_561656.1	similar to gpu:AP001509_175 cinnamoyl ester hydrolase from Bacillus halodurans (118 aa); 37% identity in 92 aa overlap
NP_561657.1	similar to sp:YE54_HAEIN HYPOTHETICAL CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI1454 from Haemophilus influenzae (213 aa); 39.9% identity in 193 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561658.1	C-terminal region is similar to pir:C69464 carboxylesterase (estA) homolog from Archaeoglobus fulgidus (311 aa); 35.9% identity in 248 aa overlap
NP_561659.1	similar to gpu:AE004154_11 carbon starvation protein A,  from Vibrio cholerae (494 aa); 48.1% identity in 437 aa overlap.  N-terminal signal sequence and 11 transmembrane regions were found by PSORT.
NP_561660.1	no significant homology.
NP_561661.1	similar to gpu:AP001509_157 transcriptional regulator (TetR/AcrR family) from Bacillus halodurans (188 aa); 30% identity in 170 aa overlap; TetR/AcrR family
NP_561662.1	similar to pir:B69477 ABC transporter, ATP-binding protein homolog from Archaeoglobus fulgidus (231 aa); 51.3% identity in 226 aa overlap; ATP-binding protein
NP_561663.1	C-terminal region is similar to pir:C69477 hypothetical protein AF1820 from Archaeoglobus fulgidus (791 aa); 23.4% identity in 538 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561664.1	no significant homology.
NP_561665.1	partially similar to pir:B75136 hypothetical protein PAB1767 from Pyrococcus abyssi (strain Orsay) (601 aa); 23.1% identity in 329 aa overlap. 1  transmembrane region was found by PSORT
NP_561666.1	similar to gp:AF158628_1 hypothetical protein from Prochlorococcus PCC9511 (146 aa); 31.4% identity in 105 aa overlap
NP_561667.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561668.1	no significant homology.
NP_561669.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561670.1	similar to sp:CLS2_BACSU PROBABLE CARDIOLIPIN SYNTHETASE 2 (EC 2.7.8.-) (CARDIOLIPIN SYNTHASE 2) (CL SYNTHASE 2) from Bacillus subtilis (482 aa); 42.8% identity in 484 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561671.1	similar to C-terminal of gp:AF083252_3 unknown from Pseudomonas aeruginosa (278 aa); 26.8% identity in 153 aa overlap
NP_561672.1	similar to pir:S22662 cytosine deaminase (EC 3.5.4.1) from Escherichia coli (427 aa); 51.2% identity in 402 aa overlap
NP_561673.1	similar to pir:T44251 creatinase (EC 3.5.3.3) from Arthrobacter sp. (strain TE1826) (258 aa); 56.6% identity in 244 aa overlap
NP_561674.1	similar to pir:D71226 hypothetical protein PH0070 from Pyrococcus horikoshii (275 aa); 22.1% identity in 290 aa overlap.  N-terminal signal sequence and 9 transmembrane regions were found by PSORT.
NP_561675.1	partially similar to gpu:AP001513_267 BH1994 gene product from Bacillus halodurans (735 aa); 25.4% identity in 268 aa overlap
NP_561676.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_561677.1	similar to sp:GLTT_BACST PROTON/SODIUM-GLUTAMATE SYMPORT PROTEIN (GLUTAMATE-ASPARTATE CARRIER PROTEIN) from Bacillus stearothermophilus (421 aa); 62.9% identity in 421 aa overlap.  N-terminal signal sequence and 8 transmembrane regions were found by PSORT.
NP_561678.1	similar to gpu:AE004391_5 conserved hypothetical protein from Vibrio cholerae (224 aa); 43% identity in 228 aa overlap
NP_561679.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561680.1	no significant homology.
NP_561681.1	similar to gpu:AP001519_11 transcriptional regulator of multidrug-efflux transporter genes from Bacillus halodurans (271 aa); 26.7% identity in 255 aa overlap; MerR family
NP_561682.1	no significant homology.
NP_561683.1	similar to gp:CPIS1136_1 C.perfringens IS1136 DNA from Clostridium perfringens (122 aa); 68% identity in 125 aa overlap
NP_561684.1	no significant homology.
NP_561685.1	similar to sp:GUTA_BACSU PROBABLE GLUCITOL TRANSPORT PROTEIN GUTA from Bacillus subtilis (463 aa); 30% identity in 237 aa overlap. 12  transmembrane regions were found by PSORT.
NP_561686.1	similar to sp:LACR_STAXY LACTOSE OPERON TRANSCRIPTION ACTIVATOR from Staphylococcus xylosus (279 aa); 44.5% identity in 272 aa overlap; AraC/XylS family
NP_561687.1	similar to sp:BGAL_STAXY BETA-GALACTOSIDASE (EC 3.2.1.23) (LACTASE) from Staphylococcus xylosus (994 aa); 44.9% identity in 1004 aa overlap
NP_561688.1	similar to gpu:AP001520_121 BH3897 gene product from Bacillus halodurans (427 aa); 43.7% identity in 435 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561689.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561690.1	similar to N-terminal of pir:B69271 hypothetical protein AF0170 from Archaeoglobus fulgidus (434 aa); 28.7% identity in 251 aa overlap. S.D. unclear
NP_561691.1	similar to gpu:REU278372_1 NorA2 protein from Ralstonia eutropha (235 aa); 27.4% identity in 223 aa overlap
NP_561692.1	similar to pir:C75282 transcription regulator from Deinococcus radiodurans (strain R1) (231 aa); 30% identity in 200 aa overlap; Crp/Fnr family
NP_561693.1	similar to sp:RUBR_CLOPE RUBREDOXIN (RD) from Clostridium perfringens (54 aa); 77.4% identity in 53 aa overlap
NP_561694.1	similar to C-terminal of gpu:AP001510_233 flavohemoglobin from Bacillus halodurans (411 aa); 37.9% identity in 240 aa overlap. 1  transmembrane region was found by PSORT
NP_561695.1	similar to gpu:AP001507_231 transcriptional regulator of anaerobic genes from Bacillus halodurans (237 aa); 28.8% identity in 215 aa overlap; Crp/Fnr family
NP_561696.1	similar to sp:RUBR_CLOPE RUBREDOXIN (RD) from Clostridium perfringens (54 aa); 100% identity in 53 aa overlap
NP_561697.1	similar to C-terminal of sp:Y732_METJA HYPOTHETICAL PROTEIN MJ0732 from Methanococcus jannaschii (393 aa); 33.7% identity in 243 aa overlap
NP_561698.1	similar to prf:2406356A alkyl hydrogen peroxide reductase from Enterococcus faecalis (187 aa); 65.8% identity in 187 aa overlap
NP_561699.1	similar to pir:D35156 thioredoxin reductase (NADPH) (EC 1.6.4.5) from Eubacterium acidaminophilum (315 aa); 50.8% identity in 309 aa overlap. 2  transmembrane regions were found by PSORT.
NP_561700.1	similar to gp:SAU82085_1 pristinamycin resistance protein VgaB from Staphylococcus aureus (552 aa); 34.5% identity in 522 aa overlap; ATP-binding protein
NP_561701.1	similar to pir:E71373 probable regulatory protein (pfoS/R) from Treponema pallidum (350 aa); 32% identity in 338 aa overlap. 10  transmembrane regions were found by PSORT.
NP_561702.1	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis
NP_561703.1	similar to pir:C70065 transcription regulator MarR family homolog ywoH from Bacillus subtilis (137 aa); 30.7% identity in 101 aa overlap; MarR family
NP_561704.1	no significant homology.
NP_561705.1	similar to pir:A69860 transcription regulator MarR family homolog ykoM from Bacillus subtilis (154 aa); 35.6% identity in 135 aa overlap. S.D. unclear; MarR family
NP_561706.1	similar to gp:AF154003_1 pirin from Lycopersicon esculentum (291 aa); 36% identity in 272 aa overlap
NP_561707.1	similar to gpu:AP001520_267 NAD(P)H dehydrogenase (quinone) from Bacillus halodurans (211 aa); 46% identity in 198 aa overlap
NP_561708.1	similar to pir:C69805 iron(III) dicitrate transport permease homolog yfiY from Bacillus subtilis (325 aa); 48.4% identity in 279 aa overlap.  N-terminal signal sequence was found by PSORT; binding protein
NP_561709.1	similar to pir:D69805 iron(III) dicitrate transport permease homolog yfiZ from Bacillus subtilis (333 aa); 35% identity in 306 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.; permease
NP_561710.1	similar to pir:B69800 iron(III) dicitrate transport permease homolog yfhA from Bacillus subtilis (343 aa); 38% identity in 308 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.; permease
NP_561711.1	similar to pir:G70022 iron(III) dicitrate transport permease homolog yusV from Bacillus subtilis (275 aa); 50.6% identity in 257 aa overlap; ATP-binding protein
NP_561712.1	similar to gpu:AE004390_1 MutT/nudix family protein from Vibrio cholerae (186 aa); 32.5% identity in 154 aa overlap
NP_561713.1	similar to sp:YWOA_BACSU HYPOTHETICAL 21.7 KDA PROTEIN IN NRGB-SPOIIQ INTERGENIC REGION from Bacillus subtilis (193 aa); 32.6% identity in 193 aa overlap. 4 transmembrane regions were found by PSORT.
NP_561714.1	similar to sp:YOXB_BACSU HYPOTHETICAL 28.5 KDA PROTEIN IN RTP-PELB INTERGENIC REGION (ORF119+) from Bacillus subtilis (256 aa); 40.6% identity in 244 aa overlap
NP_561715.1	similar to N-terminal of sp:FLIB_SALTY LYSINE-N-METHYLASE (EC 2.1.1.-) (LYSINE N-METHYLTRANSFERASE) from Salmonella typhimurium (401 aa); 28.9% identity in 204 aa overlap
NP_561716.1	no significant homology.
NP_561717.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561718.1	no significant homology.
NP_561719.1	partially similar to pir:A75268 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (241 aa); 31.5% identity in 111 aa overlap
NP_561720.1	catalyzes the formation of L-histidinol from L-histidinol phosphate
NP_561721.1	similar to pir:S63617 cymH protein from Klebsiella oxytoca (598 aa); 54.7% identity in 563 aa overlap
NP_561722.1	similar to sp:YA25_METJA HYPOTHETICAL PROTEIN MJ1025 from Methanococcus jannaschii (388 aa); 27.1% identity in 421 aa overlap
NP_561723.1	no significant homology.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561724.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561725.1	partially similar to prf:2316406C membrane protein from Staphylococcus gallinarum (330 aa); 38.4% identity in 151 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561726.1	similar to pir:C69805 iron(III) dicitrate transport permease homolog yfiY from Bacillus subtilis (325 aa); 31.9% identity in 273 aa overlap
NP_561727.1	similar to gpu:AP001510_258 ferrichrome ABC transporter (permease) from Bacillus halodurans (338 aa); 40.7% identity in 302 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_561728.1	similar to sp:FHUG_BACSU FERRICHROME TRANSPORT SYSTEM PERMEase FHUG from Bacillus subtilis (336 aa); 49.2% identity in 179 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561729.1	similar to sp:FHUC_BACSU FERRICHROME TRANSPORT ATP-BINDING PROTEIN FHUC from Bacillus subtilis (269 aa); 55.4% identity in 260 aa overlap; ATP-binding protein
NP_561730.1	similar to sp:YHHY_ECOLI HYPOTHETICAL 18.8 KDA PROTEIN IN GNTR-GGT INTERGENIC REGION from Escherichia coli (162 aa); 37.2% identity in 156 aa overlap
NP_561731.1	no significant homology.
NP_561732.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561733.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561734.1	similar to gpu:AP001509_223 endo-beta-N-acetylglucosaminidase from Bacillus halodurans (878 aa); 42.5% identity in 656 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561735.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_561736.1	similar to >sp:Y265_MYCGE HYPOTHETICAL PROTEIN MG265 from Mycoplasma genitalium (278 aa); 27.5% identity in 273 aa overlap
NP_561737.1	similar to gp:AF130465_1 mannose-specific phosphotransferase system component IIAB from Streptococcus salivarius (330 aa); 56.2% identity in 317 aa overlap; mannnose-specific IIAB component
NP_561738.1	similar to gp:AF130465_2 mannose-specific phosphotransferase system component IIC [Streptococcus salivarius] from Streptococcus salivarius (271 aa); 42.1% identity in 126 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.; mannnose-specific IIC component
NP_561739.1	similar to gp:AF130465_3 mannose-specific phosphotransferase system component IID [Streptococcus salivarius] from Streptococcus salivarius (303 aa); 73.2% identity in 123 aa overlap. Probably truncated by frameshift mutation; mannnose-specific IID component
NP_561740.1	similar to gp:AF130465_3 mannose-specific phosphotransferase system component IID [Streptococcus salivarius] from Streptococcus salivarius (303 aa); 62.3% identity in 167 aa overlap. Probably truncated by frameshift mutation. 3  transmembrane regions were found by PSORT.; mannnose-specific IID component
NP_561741.1	similar to gp:AF130465_4 unknown from Streptococcus salivarius (124 aa); 32.3% identity in 124 aa overlap
NP_561742.1	no significant homology.
NP_561743.1	similar to gpu:AP001520_126 endo-1,4-beta-xylanase from Bacillus halodurans (319 aa); 27.2% identity in 276 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561744.1	similar to gp:AF068901_6 unknown from Streptococcus pneumoniae (234 aa); 27.4% identity in 186 aa overlap. 7 transmembrane regions were found by PSORT.
NP_561745.1	no significant homology. S.D. unclear.
NP_561746.1	similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 34.8% identity in 428 aa overlap. 9  transmembrane regions were found by PSORT.
NP_561747.1	similar to sp:BGAL_THETU BETA-GALACTOSIDASE (EC 3.2.1.23) (LACTASE) from Thermoanaerobacterium thermosulfurigenes (716 aa); 56.3% identity in 611 aa overlap
NP_561748.1	similar to pir:C69870 conserved hypothetical protein ykwD from Bacillus subtilis (257 aa); 28.7% identity in 230 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561749.1	similar to prf:1807237B subtilin transport protein from Bacillus subtilis (599 aa); 28.6% identity in 559 aa overlap. 4  transmembrane regions were found by PSORT.; ATP-binding protein
NP_561750.1	similar to sp:SPAT_BACSU SUBTILIN TRANSPORT ATP-BINDING PROTEIN SPAT from Bacillus subtilis (614 aa); 29.6% identity in 578 aa overlap. 3  transmembrane regions were found by PSORT.; ATP-binding protein
NP_561751.1	similar to pir:E69772 hypothetical protein ydbS from Bacillus subtilis (159 aa); 36.4% identity in 99 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561752.1	similar to pir:F69772 hypothetical protein ydbT from Bacillus subtilis (493 aa); 19.1% identity in 325 aa overlap. 6  transmembrane regions were found by PSORT.
NP_561753.1	similar to sp:ARSR_STAAU ARSENICAL RESISTANCE OPERON REPRESSOR from Staphylococcus aureus plasmid pI258 (104 aa); 55.2% identity in 67 aa overlap; ArsR family
NP_561754.1	similar to pir:B70360 arsenate reductase from Aquifex aeolicus (144 aa); 45.6% identity in 125 aa overlap
NP_561755.1	similar to pir:H70158 conserved hypothetical integral membrane protein BB0473 from Borrelia burgdorferi (454 aa); 26.8% identity in 414 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561756.1	similar to gp:SPAJ6391_1 response regulator from Streptococcus pneumoniae (225 aa); 48.2% identity in 220 aa overlap
NP_561757.1	similar to gp:AF036964_2  histidine kinase from Lactobacillus sakei (339 aa); 32.1% identity in 280 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561758.1	no significant homology.
NP_561759.1	similar to gp:AF275307_2 unknown from Helicobacter pylori (234 aa); 39% identity in 100 aa overlap
NP_561760.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561761.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561762.1	similar to sp:CLOS_CLOHI ALPHA-CLOSTRIPAIN PRECURSOR (EC 3.4.22.8) (CLOSTRIDIOPEPTIDASE B) from Clostridium histolyticum (526 aa); 58.3% identity in 533 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561763.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561764.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561765.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561766.1	similar to gp:AP001520_137 ABC transporter (ATP-binding protein) from Bacillus halodurans (253 aa); 54.4% identity in 250 aa overlap; ATP-binding protein
NP_561767.1	similar to pir:B70001 ABC transporter (permease) homolog ytsD from Bacillus subtilis (646 aa); 23.6% identity in 665 aa overlap. 10  transmembrane regions were found by PSORT.; permease
NP_561768.1	similar to gb|AAF56462.1| (AE003751) CG11909 gene product from Drosophila melanogaster (657 aa); 31% identity in 432 aa overlap
NP_561769.1	no significant homology.
NP_561770.1	similar to gp:CPASPC_1 aspC gene product from Clostridium perfringens (160 aa); 96.9% identity in 159 aa overlap
NP_561771.1	similar to gp:AF202316_3 rubrerythrin from Moorella thermoacetica (191 aa); 55.4% identity in 184 aa overlap
NP_561772.1	similar to gp:AP001509_229 alpha-mannosidase from Bacillus halodurans (1039 aa); 32.8% identity in 1081 aa overlap
NP_561773.1	similar to gp:AP001510_12 BH0837 gene product from Bacillus halodurans (197 aa); 31.6% identity in 177 aa overlap
NP_561774.1	similar to sp:ADHA_BACSU PROBABLE NADH-DEPENDENT BUTANOL DEHYDROGENASE 1 (EC 1.1.1.-) from Bacillus subtilis (387 aa); 48.2% identity in 390 aa overlap
NP_561775.1	similar to gp:AP001516_160 BH2731 gene product from Bacillus halodurans (371 aa); 25.3% identity in 316 aa overlap
NP_561776.1	similar to sp:Y092_HAEIN HYPOTHETICAL PROTEIN HI0092 from Haemophilus influenzae (strain Rd KW20) (419 aa); 60.8% identity in 395 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_561777.1	similar to sp:YHAD_HAEIN HYPOTHETICAL PROTEIN HI0091 from Haemophilus influenzae (strain Rd KW20) (378 aa); 51.2% identity in 373 aa overlap
NP_561778.1	similar to sp:DEAD_BACSU PROBABLE ATP-DEPENDENT RNA HELICASE DEAD from Bacillus subtilis (479 aa); 49.2% identity in 476 aa overlap
NP_561779.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561780.1	similar to gpu:AE004241_1 conserved hypothetical protein from Vibrio cholerae (458 aa); 30.1% identity in 442 aa overlap. 12  transmembrane regions were found by PSORT.
NP_561781.1	no significant homology.
NP_561782.1	partially similar to sp:ANAG_HUMAN ALPHA-N-ACETYLGLUCOSAMINIDASE PRECURSOR (EC 3.2.1.50) (N-ACETYL-ALPHA- GLUCOSAMINIDASE) (NAG) from Homo sapiens (743 aa); 29.4% identity in 704 aa overlap
NP_561783.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561784.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
NP_561785.1	similar to pir:H75040 ribosomal protein s18 alanine acetyltransferase related PAB0870 from Pyrococcus abyssi (strain Orsay) (173 aa); 31.3% identity in 144 aa overlap
NP_561786.1	similar to gpu:AP001520_63 two-component sensor histidine kinase from Bacillus halodurans (538 aa); 28% identity in 193 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561787.1	similar to gp:AF012132_4 AgrB from Staphylococcus epidermidis (195 aa); 27.5% identity in 142 aa overlap. 5 transmembrane regions were found by PSORT.
NP_561788.1	similar to pir:D81414 probable aminopeptidase Cj0653c from Campylobacter jejuni (strain NCTC 11168) (596 aa); 44.5% identity in 587 aa overlap
NP_561789.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561790.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561791.1	similar to pir:D72513 probable aminopeptidase APE2081 from Aeropyrum pernix (strain K1) (382 aa); 40.6% identity in 377 aa overlap
NP_561792.1	partially similar to sp:TTR_PSESY ACETYLTRANSFERASE (EC 2.3.1.-) (TABTOXIN RESISTANCE PROTEIN) from Pseudomonas syringae pv. tabaci (177 aa); 35% identity in 60 aa overlap
NP_561793.1	similar to gpu:AP001512_265 BH1678 gene product from Bacillus halodurans (290 aa); 25.1% identity in 187 aa overlap.  N-terminal signal sequence and 3 transmembrane regions were found by PSORT.
NP_561794.1	similar to gp:CPIS1136_1 C.perfringens IS1136 DNA from Clostridium perfringens (122 aa); 64.8% identity in 125 aa overlap; IS1136
NP_561795.1	similar to gp:SCF56_14  acetyltransferase from Streptomyces coelicolor A3(2) (173 aa); 36.5% identity in 167 aa overlap
NP_561796.1	no significant homology. 4  transmembrane regions were found by PSORT.
NP_561797.1	similar to sp:NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSOR (EC 3.2.1.35) (HYALURONIDASE) (MU TOXIN) from Clostridium perfringens (1042 aa); 25.7% identity in 1006 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_561798.1	similar to pir:A72336 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (106 aa); 54.8% identity in 104 aa overlap
NP_561799.1	no significant homology.
NP_561800.1	similar to pir:H75077 abc transporter, ATP-binding protein PAB1696 from Pyrococcus abyssi (strain Orsay) (253 aa); 41.9% identity in 236 aa overlap; ATP-binding protein
NP_561801.1	no significant homology.
NP_561802.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561803.1	similar to pir:F70426 conserved hypothetical protein aq_1457 from Aquifex aeolicus (210 aa); 32.3% identity in 158 aa overlap
NP_561804.1	similar to gpu:AP001511_170 BH1281 gene product from Bacillus halodurans (207 aa); 33% identity in 209 aa overlap
NP_561805.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561806.1	similar to pir:B81322 probable integral membrane protein (dedA homolog) Cj1168c from Campylobacter jejuni (strain NCTC 11168) (200 aa); 37.5% identity in 80 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing).  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_561807.1	similar to pir:B81322 probable integral membrane protein (dedA homolog) Cj1168c from Campylobacter jejuni (strain NCTC 11168) (200 aa); 38.2% identity in 76 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing). 2  transmembrane regions were found by PSORT.
NP_561808.1	similar to sp:ADH1_CLOAB NADPH-DEPENDENT BUTANOL DEHYDROGENASE (EC 1.1.1.-) (BDH) from Clostridium acetobutylicum (370 aa); 44.5% identity in 371 aa overlap
NP_561809.1	similar to sp:PDUU_SALTY PROPANEDIOL UTILIZATION PROTEIN PDUU from Salmonella enterica serovar Typhimurium (116 aa); 61.4% identity in 114 aa overlap
NP_561810.1	similar to sp:PDUV_SALTY PROPANEDIOL UTILIZATION PROTEIN PDUV from Salmonella enterica serovar Typhimurium (150 aa); 41.5% identity in 142 aa overlap. 1 transmembrane region was found by PSORT
NP_561811.1	similar to pir:T35758 probable response regulator from Streptomyces coelicolor (218 aa); 38.5% identity in 182 aa overlap
NP_561812.1	similar to pir:E70596 hypothetical protein Rv3220c from Mycobacterium tuberculosis (strain H37RV) (501 aa); 25.8% identity in 461 aa overlap. Also similar to many histidine kinases
NP_561813.1	ethanolamine utilization protein EutA
NP_561814.1	similar to sp:EUTB_ECOLI ETHANOLAMINE AMMONIA-LYASE HEAVY CHAIN (EC 4.3.1.7) from Escherichia coli (453 aa); 61.7% identity in 452 aa overlap
NP_561815.1	catalyzes the formation of acetaldehyde from ethanolamine
NP_561816.1	similar to sp:EUTL_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTL from Escherichia coli (219 aa); 49.1% identity in 212 aa overlap
NP_561817.1	partially similar to gp:AF026270_10 PduJ from Salmonella enterica serovar Typhimurium (91 aa); 50.6% identity in 87 aa overlap. 1  transmembrane region was found by PSORT
NP_561818.1	similar to N-termminal of pir:DEEC acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) / alcohol dehydrogenase (EC 1.1.1.1) from Escherichia coli (891 aa); 41.1% identity in 440 aa overlap. 1  transmembrane region was found by PSORT
NP_561819.1	similar to prf:2520232K pduJ gene from Salmonella enterica (91 aa); 58% identity in 88 aa overlap
NP_561820.1	similar to sp:EUTT_ECOLI ETHANOLAMINE UTILIZATION COBALAMIN ADENOSYLTRANSFERASE (EC 2.5.1.17) from Escherichia coli (267 aa); 30.4% identity in 217 aa overlap
NP_561821.1	similar to prf:2520232M pduL gene from Salmonella enterica (210 aa); 53.5% identity in 198 aa overlap
NP_561822.1	no significant homology.
NP_561823.1	similar to sp:EUTN_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTN from Salmonella typhimurium (100 aa); 34.5% identity in 87 aa overlap
NP_561824.1	similar to gp:AF026270_19 PduT from Salmonella typhimurium (184 aa); 37.5% identity in 184 aa overlap
NP_561825.1	similar to sp:EUTH_ECOLI ETHANOLAMINE UTILIZATION PROTEIN EUTH ( ETHANOLAMINE TRANSPORTER) from Escherichia coli (370 aa); 48.4% identity in 353 aa overlap. N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_561826.1	similar to sp:EUTQ_SALTY ETHANOLAMINE UTILIZATION PROTEIN EUTQ from Salmonella typhimurium (229 aa); 36.4% identity in 151 aa overlap
NP_561827.1	similar to sp:GPO_LACLC GLUTATHIONE PEROXIDASE (EC 1.11.1.9) from Lactococcus lactis (157 aa); 59.2% identity in 157 aa overlap
NP_561828.1	similar to pir:B70351 ribosomal-protein-alanine acetyltransferase from Aquifex aeolicus (154 aa); 28.2% identity in 78 aa overlap
NP_561829.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561830.1	partially similar to pir:A70399 conserved hypothetical protein aq_1151 from Aquifex aeolicus (814 aa); 30% identity in 257 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561831.1	similar to pir:T17189 conserved hypothetical protein CAB06296 from Chlorobium vibrioforme (192 aa); 40.9% identity in 181 aa overlap
NP_561832.1	no significant homology.
NP_561833.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
NP_561834.1	no significant homology.
NP_561835.1	no significant homology.
NP_561836.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561837.1	similar to pir:C75136 hypothetical protein PAB0597 from Pyrococcus abyssi (strain Orsay) (187 aa); 29.6% identity in 179 aa overlap. 1  transmembrane region was found by PSORT
NP_561838.1	no significant homology.
NP_561839.1	no significant homology.
NP_561840.1	similar to pir:E69013 conserved hypothetical protein MTH1101 from Methanobacterium thermoautotrophicum (strain Delta H) (260 aa); 30% identity in 273 aa overlap
NP_561841.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561842.1	similar to sp:GLPF_THEMA PROBABLE GLYCEROL UPTAKE FACILITATOR PROTEIN from Thermotoga maritima (strain MSB8) (234 aa); 61.5% identity in 234 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561843.1	similar to gpu:AP001514_116 BH2110 gene product from Bacillus halodurans (585 aa); 36.5% identity in 233 aa overlap. Also similar to many histidine kinases. 1 transmembrane region was found by PSORT
NP_561844.1	similar to gpu:AP001519_194 two-component response regulator from Bacillus halodurans (257 aa); 30.8% identity in 247 aa overlap
NP_561845.1	similar to prf:2223300A adenosylcobalamin-dependent glycerol dehydrogenase from Klebsiella pneumoniae (555 aa); 80.8% identity in 553 aa overlap
NP_561846.1	similar to prf:2222228B   coenzyme B12-dependent glycerol dehydratase from Citrobacter freundii (194 aa); 60.9% identity in 184 aa overlap
NP_561847.1	similar to prf:2417317C   B12-dependent glycerol dehydrogenase:SUBUNIT=small from Clostridium pasteurianum (146 aa); 70.5% identity in 132 aa overlap
NP_561848.1	similar to prf:2417317D   ORF Z from Clostridium pasteurianum (602 aa); 69.5% identity in 603 aa overlap. 1 transmembrane region was found by PSORT
NP_561849.1	similar to sp:YDHX_CITFR HYPOTHETICAL 12.5 KDA PROTEIN IN DHAR-DHAT INTERGENIC REGION (ORFX) from Citrobacter freundii (117 aa); 40.5% identity in 74 aa overlap
NP_561850.1	similar to sp:YDHW_CITFR HYPOTHETICAL 19.8 KDA PROTEIN IN DHAR-DHAT INTERGENIC REGION (ORFW) from Citrobacter freundii (176 aa); 59.6% identity in 166 aa overlap
NP_561851.1	similar to prf:2324292C   ORF Y from Clostridium pasteurianum (143 aa); 52.2% identity in 136 aa overlap. 1 transmembrane region was found by PSORT
NP_561852.1	similar to prf:2324292D   1,3-propanediol dehydrogenase from Clostridium pasteurianum (385 aa); 85.7% identity in 385 aa overlap
NP_561853.1	similar to gp:CLOPBG_4 membrane-spanning transporter protein from Clostridium perfringens (495 aa); 33.1% identity in 417 aa overlap.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_561854.1	similar to pir:B71309 hypothetical protein TP0572 from Treponema pallidum (360 aa); 33.3% identity in 120 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561855.1	similar to pir:G81269 probable acetyltransferase Cj1715 from Campylobacter jejuni (strain NCTC 11168) (176 aa); 31% identity in 158 aa overlap
NP_561856.1	no significant homology.
NP_561857.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561858.1	similar to pir:S74723 hypothetical protein sll0939 from Synechocystis sp. (strain PCC 6803) (125 aa); 30.2% identity in 96 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561859.1	similar to pir:C75409 conserved hypothetical protein from Deinococcus radiodurans (109 aa); 44.6% identity in 56 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561860.1	similar to sp:PLDB_ECOLI LYSOPHOSPHOLIPASE L2 (EC 3.1.1.5) (LECITHINASE B) from Escherichia coli (340 aa); 30.2% identity in 301 aa overlap
NP_561861.1	no significant homology. S.D. unclear.
NP_561862.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561863.1	similar to pir:D81418 probable transmembrane symporter Cj0025c from Campylobacter jejuni (strain NCTC 11168) (461 aa); 39.3% identity in 374 aa overlap. N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_561864.1	similar to gpu:AP001509_258 two-component response regulator from Bacillus halodurans (234 aa); 41.9% identity in 222 aa overlap. 1  transmembrane region was found by PSORT
NP_561865.1	similar to sp:BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA from Bacillus licheniformis (306 aa); 42.4% identity in 302 aa overlap; ATP-binding protein
NP_561866.1	no significant homology.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561867.1	similar to prf:1502267A   phoR gene from Bacillus subtilis (579 aa); 32.2% identity in 261 aa overlap. N-terminal signal sequence was found by PSORT
NP_561868.1	no significant homology.
NP_561869.1	similar to gpu:AP001518_110 BH3279 gene product from Bacillus halodurans (422 aa); 38.9% identity in 396 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561870.1	similar to sp:GPXA_NEIME GLUTATHIONE PEROXIDASE HOMOLOG from Neisseria meningitidis (177 aa); 56.5% identity in 161 aa overlap
NP_561871.1	similar to gp:AB004104_3 ORF10291-3 from Clostridium perfringens (113 aa); 47.5% identity in 40 aa overlap
NP_561872.1	similar to gp:AB004104_2 ORF10291-2 from Clostridium perfringens (196 aa); 72.4% identity in 196 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_561873.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561874.1	similar to gp:AB004104_1 ORF10291-1 from Clostridium perfringens (198 aa); 99.5% identity in 198 aa overlap
NP_561875.1	no significant homology.
NP_561876.1	similar to pir:G69838 hypothetical protein yisX from Bacillus subtilis (212 aa); 33.3% identity in 162 aa overlap
NP_561877.1	similar to pir:E69857 conserved hypothetical protein ykmA from Bacillus subtilis (147 aa); 53.2% identity in 141 aa overlap; MarR family
NP_561878.1	no significant homology.  N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561879.1	similar to sp:YJEM_ECOLI HYPOTHETICAL 54.7 KDA PROTEIN IN POXA-PSD INTERGENIC REGION from Escherichia coli (500 aa); 51.5% identity in 491 aa overlap. N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_561880.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561881.1	similar to gpu:AE004307_6 sensory box/GGDEF family protein from Vibrio cholerae (884 aa); 46% identity in 161 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_561882.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561883.1	similar to pir:G71309 probable glutamate/ aspartate transporter from Treponema pallidum (396 aa); 51.5% identity in 355 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_561884.1	no significant homology.
NP_561885.1	partially similar to pir:H81242 conserved hypothetical protein NMB0050 from Neisseria meningitidis (716 aa); 20.4% identity in 289 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_561886.1	similar to pir:A69845 Na+/H+ antiporter homolog yjbQ from Bacillus subtilis (614 aa); 31.8% identity in 468 aa overlap.  N-terminal signal sequence and 11 transmembrane regions were found by PSORT.
NP_561887.1	similar to pir:B81534 hypothetical protein CP0835 from Chlamydophila pneumoniae (219 aa); 24.6% identity in 138 aa overlap
NP_561888.1	similar to pir:F75515 probable histidinol phosphatase from Deinococcus radiodurans (strain R1) (260 aa); 26.4% identity in 231 aa overlap
NP_561889.1	no significant homology.
NP_561890.1	similar to pir:D69856 conserved hypothetical protein ykgB from Bacillus subtilis (349 aa); 34.3% identity in 338 aa overlap
NP_561891.1	similar to prf:2309135A   tet(T) gene from Streptococcus pyogenes (651 aa); 31.4% identity in 609 aa overlap. 1  transmembrane region was found by PSORT
NP_561892.1	no significant homology.
NP_561893.1	partially similar to gp:LPARGCL_1 hypothetical protein from Lactobacillus plantarum (124 aa); 47.7% identity in 109 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561894.1	partially similar to prf:2509287C   K transporter-like protein from Lactococcus lactis (170 aa); 64.1% identity in 92 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561895.1	similar to gpu:AP001511_13 ferritin from Bacillus halodurans (169 aa); 49.7% identity in 165 aa overlap
NP_561896.1	similar to gpu:AF206272_3 transcriptional regulator from Streptococcus mutans (301 aa); 25.2% identity in 266 aa overlap; AraC/XylS family
NP_561897.1	partially similar to gpu:AE004147_1 beta-N-acetylhexosaminidase from Vibrio cholerae (637 aa); 23.4% identity in 359 aa overlap
NP_561898.1	no significant homology.
NP_561899.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561900.1	similar to gpu:AP001512_10 stage V sporulation protein AF from Bacillus halodurans (487 aa); 38% identity in 466 aa overlap. 4  transmembrane regions were found by PSORT.
NP_561901.1	similar to sp:YFCC_HAEIN HYPOTHETICAL PROTEIN HI0594. from Haemophilus influenzae (509 aa); 46.9% identity in 493 aa overlap.  N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_561902.1	similar to pir:T17197 adenylate cyclase homolog from Spirulina platensis (1202 aa); 31.3% identity in 268 aa overlap. Also similar to many two-component sensor histidine kinases
NP_561903.1	similar to pir:A43577 regulatory protein pfoR from Clostridium perfringens (343 aa); 74.5% identity in 318 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561904.1	similar to gpu:AP001515_231 L-serine dehydratase beta subunit from Bacillus halodurans (220 aa); 40.9% identity in 215 aa overlap
NP_561905.1	similar to sp:SDHA_PEPAS L-SERINE DEHYDRATASE, ALPHA CHAIN (EC 4.2.1.13) (L-SERINE DEAMINASE) (SDH) (L-SD) from Peptostreptococcus asaccharolyticus (292 aa); 47.9% identity in 282 aa overlap. 3  transmembrane regions were found by PSORT.
NP_561906.1	similar to gpu:AE004222_1 conserved hypothetical protein from Vibrio cholerae (310 aa); 37.8% identity in 230 aa overlap
NP_561907.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
NP_561908.1	similar to pir:H81334 hypothetical protein Cj1270c from Campylobacter jejuni (strain NCTC 11168) (363 aa); 41.7% identity in 348 aa overlap
NP_561909.1	similar to pir:E70790 probable transcription regulator Rv3676 from Mycobacterium tuberculosis (strain H37RV) (224 aa); 29.7% identity in 212 aa overlap. 1 transmembrane region was found by PSORT; Crp/Fnr family
NP_561910.1	similar to pir:D72416 hypothetical protein TM0109 from Thermotoga maritima (strain MSB8) (328 aa); 45.3% identity in 276 aa overlap
NP_561911.1	similar to pir:C69830 glucanase homolog yhfE from Bacillus subtilis (346 aa); 45% identity in 342 aa overlap
NP_561912.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561913.1	no significant homology.
NP_561914.1	similar to sp:SYE_BACSU GLUTAMYL-TRNA SYNTHETASE (EC 6.1.1.17) (GLUTAMATE-TRNA LIGASE) (GLURS). from Bacillus subtilis (483 aa); 33.3% identity in 510 aa overlap
NP_561915.1	no significant homology.
NP_561916.1	similar to pir:B72450 hypothetical protein APE2246 from Aeropyrum pernix (strain K1) (188 aa); 27.2% identity in 151 aa overlap
NP_561917.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
NP_561918.1	no significant homology.
NP_561919.1	similar to gpu:AP001515_87 BH2353 gene product from Bacillus halodurans (79 aa); 46.7% identity in 45 aa overlap
NP_561920.1	catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system
NP_561921.1	similar to C-terminal of pir:S75981 magnesium/cobalt transport protein sll0507 from Synechocystis sp. (strain PCC 6803) (387 aa); 22.4% identity in 263 aa overlap. 2  transmembrane regions were found by PSORT.
NP_561922.1	catalyzes the removal of amino acids from the N termini of peptides
NP_561923.1	partially similar to gp:D90740_3 Hypothetical 24.0K protein from Escherichia coli (476 aa); 27.6% identity in 170 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_561924.1	similar to gp:BCE243712_8 YkoW protein from Bacillus cereus (892 aa); 30.9% identity in 278 aa overlap
NP_561925.1	catalyzes the formation of methylglyoxal from glycerone phosphate
NP_561926.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_561927.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561928.1	similar to pir:G75032 probable translation initiation inhibitor PAB0825 from Pyrococcus abyssi (strain Orsay) (127 aa); 61% identity in 123 aa overlap
NP_561929.1	no significant homology.
NP_561930.1	similar to gp:RCAFDXC_3 ORFU1 product, potential FMN-protein from Rhodobacter capsulatus (435 aa); 42.6% identity in 404 aa overlap
NP_561931.1	similar to gpu:AP001518_203 BH3372 gene product from Bacillus halodurans (266 aa); 36.3% identity in 240 aa overlap. ATT start
NP_561932.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
NP_561933.1	similar to gpu:AP001507_90 para-aminobenzoate synthase component I from Bacillus halodurans (486 aa); 37.3% identity in 405 aa overlap
NP_561934.1	similar to gp:AP001507_92 4-amino-4-deoxychorismate lyase from Bacillus halodurans (295 aa); 28.6% identity in 266 aa overlap
NP_561935.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
NP_561936.1	similar to sp:YBUK_CLOAB HYPOTHETICAL 18.9 KDA PROTEIN IN BUK 3'REGION (ORF4) from Clostridium acetobutylicum (strain NCIMB 8052) (157 aa); 50.3% identity in 155 aa overlap
NP_561937.1	similar to gpu:AP001507_93 dihydropteroate synthase (dihydropteroate pyrophosphorylase) from Bacillus halodurans (280 aa); 60.7% identity in 262 aa overlap
NP_561938.1	similar to sp:SULD_STRPN BIFUNCTIONAL FOLATE SYNTHESIS PROTEIN [INCLUDES: DIHYDRONEOPTERIN ALDOLASE (EC 4.1.2.25) (DHNA) from Streptococcus pneumoniae (270 aa); 43.9% identity in 271 aa overlap
NP_561939.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_561940.1	no significant homology. 1  transmembrane region was found by PSORT
NP_561941.1	partially similar to gp:AE002118_3 pyruvate kinase from Ureaplasma urealyticum (474 aa); 31.5% identity in 324 aa overlap
NP_561942.1	similar to pir:D69206 conserved hypothetical protein MTH798 from Methanobacterium thermoautotrophicum (strain Delta H) (186 aa); 34.7% identity in 167 aa overlap. 4  transmembrane regions were found by PSORT.
NP_561943.1	similar to gpu:AP001509_234 BH0796 gene product from Bacillus halodurans (500 aa); 40.4% identity in 451 aa overlap.  N-terminal signal sequence was found by PSORT
NP_561944.1	similar to pir:B75108 hypothetical protein PAB1926 from Pyrococcus abyssi (strain Orsay) (127 aa); 36.7% identity in 90 aa overlap
NP_561945.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
NP_561946.1	similar to gpu:AP001509_234 BH0796 gene product from Bacillus halodurans (500 aa); 47.3% identity in 425 aa overlap
NP_561947.1	similar to gpu:AP001510_120 transcriptional regulator (ArsR family) from Bacillus halodurans (99 aa); 40.3% identity in 72 aa overlap; ArsR family
NP_561948.1	similar to pir:T44439 indole-3-acetyl-L-aspartic acid hydrolase (EC 3.5.1.-) [validated] from Enterobacter agglomerans (441 aa); 40% identity in 425 aa overlap
NP_561949.1	similar to sp:LICA_HAEIN LICA PROTEIN from Haemophilus influenzae (strain RM7004) (339 aa); 28.7% identity in 258 aa overlap
NP_561950.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
NP_561951.1	similar to gpu:AP001512_177 cobinamide kinase/cobinamide phosphate guanylyltransferase from Bacillus halodurans (188 aa); 23.4% identity in 154 aa overlap
NP_561952.1	similar to gpu:AP001512_179 cobalamin synthase from Bacillus halodurans (261 aa); 31.6% identity in 234 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_561953.1	similar to gpu:AP001512_181 BH1594 gene product from Bacillus halodurans (140 aa); 39.2% identity in 51 aa overlap
NP_561954.1	similar to gpu:AP001512_180 alpha-ribazole-5'-phosphate phosphatase from Bacillus halodurans (209 aa); 31.3% identity in 176 aa overlap. 1 transmembrane region was found by PSORT
NP_561955.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
NP_561956.1	cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase
NP_561957.1	similar to pir:G70046 iron-binding protein homolog yvrC from Bacillus subtilis (314 aa); 34.2% identity in 298 aa overlap; ferric ion-binding protein
NP_561958.1	similar to gpu:AP001512_173 ferric ion ABC transpoter (permease) from Bacillus halodurans (353 aa); 39.3% identity in 305 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.; permease
NP_561959.1	similar to N-terminal half of gpu:AP001512_174 iron(III) dicitrate transport system (permease) from Bacillus halodurans (491 aa); 37.8% identity in 241 aa overlap; permease
NP_561960.1	similar to pir:H69339 conserved hypothetical protein AF0720 from Archaeoglobus fulgidus (214 aa); 34.6% identity in 214 aa overlap
NP_561961.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
NP_561962.1	partially similar to gpu:AB012238_1 alpha-glucosidase from Bacillus thermoamyloliquefaciens (731 aa); 27.1% identity in 591 aa overlap
NP_561963.1	similar to pir:B29504 hypothetical 18K protein (mer operon) from Staphylococcus aureus plasmid pI258 (161 aa); 25% identity in 132 aa overlap
NP_561964.1	no significant homology.
NP_561965.1	no significant homology.
NP_561966.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
NP_561967.1	similar to pir:A81324 probable cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) Cj1183c from Campylobacter jejuni (strain NCTC 11168) (387 aa); 46.8% identity in 391 aa overlap
NP_561968.1	similar to pir:E64935 hypothetical protein b1757 from Escherichia coli (strain K-12) (440 aa); 36.4% identity in 404 aa overlap
NP_561969.1	no significant homology.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_561970.1	no significant homology.
NP_561971.1	similar to pir:T48821 hypothetical protein 68B2.50 from Neurospora crassa (386 aa); 25% identity in 260 aa overlap
NP_561972.1	catalyzes the formation of L-histidinol from L-histidinol phosphate
NP_561973.1	partially similar to prf:2217303A periplasmic protein from Escherichia coli        (262 aa); 26.7% identity in 101 aa overlap. 1  transmembrane region was found by PSORT
NP_561974.1	catalyzes the formation of NAD(+) from deamido-NAD(+) using either ammonia or glutamine as the nitrogen source
NP_561975.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561976.1	similar to sp:YBBK_ECOLI HYPOTHETICAL 33.7 KDA PROTEIN IN USHA-TESA INTERGENIC REGION from Escherichia coli (305 aa); 42.8% identity in 297 aa overlap. N-terminal signal sequence was found by PSORT
NP_561977.1	similar to sp:ALR_BORBU ALANINE RACEMASE (EC 5.1.1.1) from Borrelia burgdorferi (372 aa); 33.4% identity in 314 aa overlap
NP_561978.1	similar to pir:G72398 hypothetical protein TM0246 from Thermotoga maritima (strain MSB8) (224 aa); 32.4% identity in 182 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_561979.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
NP_561980.1	similar to pir:A72399 Na-translocating NADH-quinone reductase, Nqr5 subunit from Thermotoga maritima (strain MSB8) (213 aa); 54.6% identity in 194 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_561981.1	involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate
NP_561982.1	similar to pir:I55434 deoxycytidylate deaminase from Homo sapiens (178 aa); 60.1% identity in 158 aa overlap
NP_561983.1	similar to gpu:AP001514_67 transcriptional regulator (MarR family) from Bacillus halodurans (149 aa); 30.7% identity in 101 aa overlap; MarR family
NP_561984.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
NP_561985.1	similar to sp:FABD_BACSU MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE (EC 2.3.1.39) from Bacillus subtilis (317 aa); 43.5% identity in 310 aa overlap
NP_561986.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_561987.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
NP_561988.1	similar to pir:H69580 acetyl-CoA carboxylase (biotin carboxyl carrier subunit) accB from Bacillus subtilis (159 aa); 41.4% identity in 162 aa overlap; biotin carboxyl carrier subunit
NP_561989.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
NP_561990.1	Catalyzes the formation of malnoyl-CoA, which in turn controls the rate of fatty acid metabolism
NP_561991.1	similar to gpu:AP001517_288 acetyl-CoA carboxylase transferase beta subunit from Bacillus halodurans (282 aa); 49.8% identity in 289 aa overlap; transferase beta subunit
NP_561992.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
NP_561993.1	similar to pir:C69525 conserved hypothetical protein AF2203 from Archaeoglobus fulgidus (119 aa); 35.3% identity in 85 aa overlap
NP_561994.1	no significant homology.
NP_561995.1	similar to pir:E75018 endonuclease iv related protein PAB1103 from Pyrococcus abyssi (strain Orsay) (281 aa); 46.2% identity in 236 aa overlap
NP_561996.1	similar to gpu:AP001512_163 pseudouridylate synthase from Bacillus halodurans (242 aa); 42.7% identity in 234 aa overlap
NP_561997.1	similar to pir:G81942 hypothetical protein NMA0960 from Neisseria meningitidis (group A strain Z2491) (188 aa); 41.1% identity in 168 aa overlap. ATC start
NP_561998.1	similar to gpu:AP001517_62 BH2940 gene product from Bacillus halodurans (284 aa); 41.8% identity in 282 aa overlap. 1  transmembrane region was found by PSORT; RpiR family
NP_561999.1	similar to gpu:AP001518_110 BH3279 gene product from Bacillus halodurans (422 aa); 38.5% identity in 379 aa overlap
NP_562000.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
NP_562001.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
NP_562002.1	partially similar to pir:B70351 ribosomal-protein-alanine acetyltransferase from Aquifex aeolicus (154 aa); 41.2% identity in 97 aa overlap
NP_562003.1	no significant homology.
NP_562004.1	partially similar to pir:S37170 repB protein from Lactococcus lacti (381 aa); 25.1% identity in 175 aa overlap
NP_562005.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562006.1	no significant homology.
NP_562007.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562008.1	similar to sp:PAC_BACSH PENICILLIN ACYLASE (EC 3.5.1.11) (PENICILLIN V AMIDASE) from Bacillus sphaericus (338 aa); 33.7% identity in 323 aa overlap
NP_562009.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
NP_562010.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
NP_562011.1	similar to sp:RIPX_BACSU PROBABLE INTEGRASE/RECOMBINASE RIPX from Bacillus subtilis (296 aa); 28% identity in 321 aa overlap
NP_562012.1	no significant homology.
NP_562013.1	similar to pir:G82969 probable transcription regulator PA5403 from Pseudomonas aeruginosa (strain PAO1) (68 aa); 41.2% identity in 68 aa overlap
NP_562014.1	no significant homology.
NP_562015.1	no significant homology.
NP_562016.1	similar to N-terminal of gp:MHO243903_1 P75 protein from Mycoplasma hominis (654 aa); 26.2% identity in 168 aa overlap
NP_562017.1	no significant homology.
NP_562018.1	no significant homology
NP_562019.1	N-terminal portion is similar to pir:T12827 hypothetical protein yonO from Bacillus subtilis phage SPBc2 (839 aa); 21.3% identity in 536 aa overlap
NP_562020.1	no significant homology.
NP_562021.1	no significant homology.
NP_562022.1	no significant homology.
NP_562023.1	no significant homology.
NP_562024.1	no significant homology
NP_562025.1	no significant homology.
NP_562026.1	similar to pir:T28355 ORF MSV194 ALI motif gene family protein from Melanoplus sanguinipes entomopoxvirus (409 aa); 28.2% identity in 195 aa overlap
NP_562027.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562028.1	no significant homology.
NP_562029.1	no significant homology.
NP_562030.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562031.1	no significant homology.
NP_562032.1	similar to prf:2419278BV   ORF from bacteriophage phi-PVL (113 aa); 33.7% identity in 95 aa overlap
NP_562033.1	similar to pir:T00134 hypothetical protein 4 from Staphylococcus aureus phage phi PVL (155 aa); 28% identity in 150 aa overlap
NP_562034.1	similar to gp:AF198256_11 phage D3 terminase-like protein from Haemophilus influenzae (555 aa); 25.9% identity in 528 aa overlap. 2  transmembrane regions were found by PSORT.
NP_562035.1	no significant homology.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562036.1	similar to pir:T13514 hypothetical protein 25 from Bacillus phage phi-105 (416 aa); 29.3% identity in 372 aa overlap
NP_562037.1	similar to gp:AF198256_17 phage phi-C31 gp35-like protein from Haemophilus influenzae (188 aa); 35.2% identity in 159 aa overlap
NP_562038.1	similar to pir:T13516 hypothetical protein 27 from bacteriophage phi-105 (397 aa); 32.6% identity in 371 aa overlap
NP_562039.1	similar to pir:T13519 hypothetical protein 30 from Bacillus phage phi-105 (115 aa); 26.5% identity in 68 aa overlap
NP_562040.1	no significant homology.
NP_562041.1	similar to pir:T13521 hypothetical protein 32 from Bacillus phage phi-105 (127 aa); 27.7% identity in 119 aa overlap
NP_562042.1	similar to pir:T13522 hypothetical protein 33 from Bacillus phage phi-105 (162 aa); 53.6% identity in 28 aa overlap. 1  transmembrane region was found by PSORT
NP_562043.1	similar to pir:T13523 hypothetical protein 34 from Bacillus phage phi-105 (200 aa); 28.4% identity in 141 aa overlap
NP_562044.1	no significant homology.
NP_562045.1	no significant homology.
NP_562046.1	similar to pir:T00148 hypothetical protein 15 from Staphylococcus aureus phage phi PVL (694 aa); 17.5% identity in 531 aa overlap. 2  transmembrane regions were found by PSORT.
NP_562047.1	similar to gp:LBA131519_53 hypothetical protein from Lactobacillus bacteriophage phi adh (247 aa); 26.2% identity in 214 aa overlap
NP_562048.1	partially similar to pir:F70700 hypothetical protein Rv0024 from Mycobacterium tuberculosis (strain H37RV) (281 aa); 40% identity in 120 aa overlap
NP_562049.1	partially similar to gpu:AF278687_1 choline binding protein E from Streptococcus pneumoniae (627 aa); 26.4% identity in 447 aa overlap
NP_562050.1	no significant homology.
NP_562051.1	no significant homology.
NP_562052.1	similar to pir:JH0445 hypothetical 10.2K protein (lyc 5' region) from Clostridium acetobutylicum (86 aa); 25% identity in 52 aa overlap
NP_562053.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_562054.1	partially similar to sp:BCN5_CLOPE BACTERIOCIN BCN5 from Clostridium perfringens plasmid pIP404 (890 aa); 51.1% identity in 141 aa overlap
NP_562055.1	no significant homology.
NP_562056.1	no significant homology.
NP_562057.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562058.1	no significant homology.
NP_562059.1	no significant homology.
NP_562060.1	similar to prf:2515339A   regulatory protein from Leuconostoc mesenteroides (312 aa); 33.4% identity in 302 aa overlap. 1  transmembrane region was found by PSORT; SorC family
NP_562061.1	similar to gpu:AE004165_6 citG protein from Vibrio cholerae (313 aa); 34.2% identity in 260 aa overlap. 1 transmembrane region was found by PSORT
NP_562062.1	similar to gpu:AE004165_1 citrate (pro-3S)-lyase ligase from Vibrio cholerae (356 aa); 40.8% identity in 316 aa overlap
NP_562063.1	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate
NP_562064.1	similar to sp:CILB_LEUMC CITRATE LYASE BETA CHAIN (EC 4.1.3.6) (CITRASE) (CITRYL-COA LYASE SUBUNIT) (EC 4.1.3.34) from Leuconostoc mesenteroides (302 aa); 57.7% identity in 286 aa overlap
NP_562065.1	similar to sp:CILA_LEUMC CITRATE LYASE ALPHA CHAIN (EC 4.1.3.6) (CITRASE) (CITRATE COA- TRANSFERASE SUBUNIT) (EC 2.8.3.10) from Leuconostoc mesenteroides (512 aa); 58.7% identity in 508 aa overlap
NP_562066.1	partially similar to sp:CITG_LEUMC CITG PROTEIN from Leuconostoc mesenteroides (467 aa); 33.3% identity in 162 aa overlap
NP_562067.1	similar to pir:T46727 probable malic enzyme from Weissella paramesenteroides plasmid (378 aa); 49.1% identity in 373 aa overlap. 1  transmembrane region was found by PSORT; malic enzyme
NP_562068.1	similar to gpu:AE004164_11 citrate/sodium symporter from Vibrio cholerae (448 aa); 39.8% identity in 422 aa overlap. 11  transmembrane regions were found by PSORT.
NP_562069.1	similar to sp:PFL_CLOPA FORMATE ACETYLTRANSFERASE (EC 2.3.1.54) (PYRUVATE FORMATE-LYASE) from Clostridium pasteurianum (740 aa); 73.7% identity in 744 aa overlap. 1 transmembrane region was found by PSORT
NP_562071.1	This protein performs the mismatch recognition step during the DNA repair process
NP_562072.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NP_562073.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
NP_562074.1	similar to gpu:AP001515_99 host factor-1 protein from Bacillus halodurans (78 aa); 66.2% identity in 68 aa overlap
NP_562075.1	similar to pir:C69888 conserved hypothetical protein ynbB from Bacillus subtilis (421 aa); 53.5% identity in 398 aa overlap
NP_562076.1	no significant homology.
NP_562077.1	Represses a number of genes involved in the response to DNA damage
NP_562078.1	no significant homology.
NP_562079.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
NP_562080.1	similar to pir:D70069 hypothetical protein ywsA from Bacillus subtilis (98 aa); 31.9% identity in 69 aa overlap
NP_562081.1	catalyzes the formation of 2-oxobutanoate from L-threonine
NP_562082.1	similar to sp:LYSP_ECOLI LYSINE-SPECIFIC PERMEASE. from Escherichia coli (488 aa); 54.1% identity in 440 aa overlap. 11  transmembrane regions were found by PSORT.
NP_562083.1	similar to pir:G71309 probable glutamate/ aspartate transporter from Treponema pallidum (396 aa); 30.8% identity in 347 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_562084.1	no significant homology.
NP_562085.1	similar to sp:YYAS_BACSU HYPOTHETICAL 22.0 KDA PROTEIN IN COTF-TETB INTERGENIC REGION from Bacillus subtilis (201 aa); 24.5% identity in 204 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562086.1	no significant homology.
NP_562087.1	no significant homology.
NP_562088.1	partially similar to sp:IMD_STRCN INHIBITION OF MORPHOLOGICAL DIFFERENTIATION PROTEIN from Streptomyces cyaneus (277 aa); 25% identity in 208 aa overlap
NP_562089.1	partially similar to pir:A71195 hypothetical protein PH1832 from Pyrococcus horikoshii (202 aa); 32.4% identity in 111 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562090.1	similar to sp:EXOA_BACSU EXODEOXYRIBONUCLEASE (EC 3.1.11.2) from Bacillus subtilis (252 aa); 65.9% identity in 249 aa overlap
NP_562091.1	no significant homology.
NP_562092.1	similar to gp:AF158628_1 hypothetical protein from Prochlorococcus PCC9511 (146 aa); 31.7% identity in 104 aa overlap. 1  transmembrane region was found by PSORT
NP_562093.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
NP_562094.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits
NP_562095.1	responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+)
NP_562096.1	OMP decarboxylase; OMPDCase; OMPdecase; type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
NP_562097.1	similar to sp:PYRC_AQUAE DIHYDROOROTASE (EC 3.5.2.3) (DHOASE) from Aquifex aeolicus (422 aa); 41.8% identity in 395 aa overlap
NP_562098.1	no significant homology.
NP_562099.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
NP_562100.1	similar to pir:G75518 probable beta-lactamase from Deinococcus radiodurans (strain R1) (277 aa); 26.3% identity in 205 aa overlap
NP_562101.1	similar to gp:AF159501_4 Pfk1(6-phosphofructokinase) (EC 2.7.1.11) from Myxococcus xanthus (361 aa); 48.6% identity in 360 aa overlap
NP_562102.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
NP_562103.1	similar to pir:H69848 mannose-6-phosphate isomerase homolog yjdE from Bacillus subtilis (315 aa); 38.8% identity in 307 aa overlap. 1  transmembrane region was found by PSORT
NP_562104.1	similar to pir:T31440 UDP-N-acetylmuramyl tripeptide synthetase homolog murC from Heliobacillus mobilis (455 aa); 31.3% identity in 438 aa overlap
NP_562105.1	similar to pir:T31439 probable cobyric acid synthase CobQ from Heliobacillus mobilis (252 aa); 48.2% identity in 228 aa overlap
NP_562106.1	similar to pir:S56384 hypothetical 56.3K protein (genX-psd intergenic region) from Escherichia coli (514 aa); 52.1% identity in 484 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_562107.1	partially similar to pir:S74741 hypothetical protein sll092 from Synechocystis sp. (strain PCC 6803) (184 aa); 39.8% identity in 103 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562108.1	similar to C-terminal of gp:AF049873_3 sensor protein from Lactococcus lacti (464 aa); 28% identity in 307 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562109.1	similar to gpu:AP001511_42 two-component response regulator from Bacillus halodurans (232 aa); 47.5% identity in 223 aa overlap
NP_562110.1	similar to pir:D70325 hypothetical protein aq_276 from Aquifex aeolicus (458 aa); 24.6% identity in 395 aa overlap
NP_562111.1	partially similar to pir:F70325 conserved hypothetical protein aq_278 from Aquifex aeolicus (611 aa); 34.8% identity in 581 aa overlap.Also similar to pir:A72369 (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein from Thermotoga maritima (strain MSB8)
NP_562112.1	similar to pir:C72391 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (558 aa); 47.6% identity in 572 aa overlap
NP_562113.1	similar to pir:B71116 probable helicase PH0697 from Pyrococcus horikoshii (641 aa); 28.3% identity in 594 aa overlap. 1  transmembrane region was found by PSORT
NP_562114.1	similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 26.1% identity in 111 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing). 3  transmembrane regions were found by PSORT.
NP_562115.1	similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 37.9% identity in 309 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing). 8  transmembrane regions were found by PSORT.
NP_562116.1	similar to gp:AF248951_4 MdsC protein from Prevotella sp. RS2 (362 aa); 40.4% identity in 356 aa overlap
NP_562117.1	partially similar to pir:D64437 glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) from Methanococcus jannaschii (408 aa); 27.5% identity in 229 aa overlap
NP_562118.1	similar to pir:H69877 calcium-transporting ATPase homolog yloB from Bacillus subtilis (890 aa); 42.3% identity in 855 aa overlap. 9  transmembrane regions were found by PSORT.
NP_562119.1	similar to gpu:AP001518_108 spore cortex protein from Bacillus halodurans (539 aa); 22.1% identity in 403 aa overlap.  N-terminal signal sequence and 12 transmembrane regions were found by PSORT.
NP_562120.1	similar to pir:D72316 ribosomal large subunit pseudouridine synthase C from Thermotoga maritima (strain MSB8) (304 aa); 36.3% identity in 289 aa overlap
NP_562121.1	similar to pir:G71097 probable amidohydrolase from Pyrococcus horikoshii (387 aa); 43.6% identity in 390 aa overlap
NP_562122.1	similar to sp:PCRA_STAAU ATP-DEPENDENT HELICASE PCRA (EC 3.6.1.-) from Staphylococcus aureus (675 aa); 31.3% identity in 578 aa overlap
NP_562123.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate
NP_562124.1	no significant homology.
NP_562125.1	no significant homology.
NP_562126.1	similar to gp:AF095596_1 ferric uptake regulator homolog from Staphylococcus aureus (148 aa); 30.4% identity in 138 aa overlap; FurR family
NP_562127.1	divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases
NP_562128.1	similar to pir:F72329 uracil permease from Thermotoga maritima (strain MSB8) (399 aa); 52.5% identity in 413 aa overlap. 12  transmembrane regions were found by PSORT.
NP_562129.1	no significant homology.
NP_562130.1	partially similar to pir:B75463 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (142 aa); 47.8% identity in 69 aa overlap
NP_562131.1	similar to prf:2513373E   Fe uptake system:SUBUNIT=permease from Streptomyces coelicolor (271 aa); 45.6% identity in 136 aa overlap.; ATP-binding protein
NP_562132.1	no significant homology.
NP_562133.1	similar to pir:G75619 probable hemin ABC transporter, permease from Deinococcus radiodurans (strain R1) (354 aa); 37.9% identity in 282 aa overlap. N-terminal signal sequence and 8  transmembrane regions were found by PSORT.; permease
NP_562134.1	similar to pir:G70046 iron-binding protein homolog yvrC from Bacillus subtilis (314 aa); 25.8% identity in 229 aa overlap; binding protein
NP_562135.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6
NP_562136.1	catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine
NP_562137.1	catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3
NP_562138.1	similar to pir:A64497 precorrin-3 methylase from Methanococcus jannaschii (259 aa); 54.9% identity in 244 aa overlap. 1  transmembrane region was found by PSORT
NP_562139.1	catalyzes the formation of precorrin-3A from precorrin-2
NP_562140.1	similar to sp:CBIT_SALTY PRECORRIN-8W DECARBOXYLASE (EC 1.-.-.-) from Salmonella typhimurium (192 aa); 29.9% identity in 194 aa overlap
NP_562141.1	similar to sp:COBL_METJA PROBABLE PRECORRIN-6Y C5,15-METHYLTRANSFERASE [DECARBOXYLATING] (EC 2.1.1.132) (PRECORRIN-6 METHYLTRANSFERASE) (PRECORRIN-6Y METHYLASE) from Methanococcus jannaschii (211 aa); 36.6% identity in 202 aa overlap
NP_562142.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
NP_562143.1	catalyzes the interconversion of precorrin-8X and cobyrinic acid
NP_562144.1	similar to sp:CBIK_SALTY CBIK PROTEIN from Salmonella typhimurium (264 aa); 36.8% identity in 261 aa overlap
NP_562145.1	similar to prf:2015382A ORF 1 from Clostridium perfringens (80 aa); 60% identity in 75 aa overlap. N-terminal signal sequence was found by PSORT
NP_562146.1	no significant homology.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562147.1	similar to pir:T30290 AAS surface protein from Staphylococcus saprophyticus (1463 aa); 25.4% identity in 764 aa overlap.Also similar to pir:T30211 autolysin E from Staphylococcus epidermidis; gp:AF192767_1 enterotoxin from Bacillus cereus.  N-terminal signal sequence was found by PSORT
NP_562148.1	no significant homology.
NP_562149.1	no significant homology.
NP_562150.1	similar to sp:NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSOR (EC 3.2.1.35) (HYALURONIDASE) (MU TOXIN) from Clostridium perfringens (1042 aa); 27.2% identity in 736 aa overlap.  N-terminal signal sequence was found by PSORT; mu-toxin
NP_562151.1	partially similar to pir:T29435 hypothetical protein SC3A7.16c from Streptomyces coelicolor (1361 aa); 23.5% identity in 226 aa overlap
NP_562152.1	similar to gp:CPSUPOXID_1 superoxide dismutase from Clostridium perfringens (227 aa); 95.6% identity in 227 aa overlap. (EC 1.15.1.1)
NP_562153.1	no significant homology.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562154.1	similar to pir:B69532 multidrug resistance protein homolog from Archaeoglobus fulgidus (503 aa); 31.3% identity in 400 aa overlap.  N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_562155.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_562156.1	similar to gpu:AP001508_234 magnesium (Mg2+) transporter from Bacillus halodurans (452 aa); 35% identity in 360 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562157.1	similar to prf:2316406C membrane protein from Staphylococcus gallinarum (330 aa); 32.2% identity in 242 aa overlap.  N-terminal signal sequence and 2 transmembrane regions were found by PSORT.
NP_562158.1	similar to gp:LMCSPLGEN_1 CspL protein from Listeria monocytogenes (68 aa); 55.9% identity in 68 aa overlap
NP_562159.1	no significant homology.
NP_562160.1	similar to pir:A69760 conserved hypothetical protein yciB from Bacillus subtilis (194 aa); 35.3% identity in 116 aa overlap
NP_562161.1	similar to sp:YULF_BACSU HYPOTHETICAL 36.5 KDA PROTEIN IN GBSA-TLPB INTERGENIC REGION from Bacillus subtilis (328 aa); 28.4% identity in 320 aa overlap
NP_562162.1	no significant homology. 2  transmembrane regions were found by PSORT.
NP_562163.1	similar to gp:D85082_8 YfiX from Bacillus subtilis (610 aa); 36.1% identity in 581 aa overlap.  N-terminal signal sequence and 13  transmembrane regions were found by PSORT.
NP_562164.1	similar to pir:A69805 hypothetical protein yfiW from Bacillus subtilis (258 aa); 31.8% identity in 195 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_562165.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_562166.1	partially similar to pir:A64465 hypothetical protein MJ1322 from Methanococcus jannaschii (1005 aa); 25.8% identity in 411 aa overlap
NP_562167.1	partially similar to pir:B70356 chromosome assembly protein homolog from Aquifex aeolicus (1156 aa); 23% identity in 291 aa overlap. 1  transmembrane region was found by PSORT
NP_562168.1	similar to gpu:AE004082_1 conserved hypothetical protei from Xylella fastidiosa (253 aa); 39.7% identity in 234 aa overlap. 7  transmembrane regions were found by PSORT.
NP_562169.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_562170.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
NP_562171.1	similar to pir:F75069 hydrogenase, chain gamma related protein PAB1737 from Pyrococcus abyssi (strain Orsay) (278 aa); 51.5% identity in 272 aa overlap. 1 transmembrane region was found by PSORT
NP_562172.1	similar to sp:ADH1_CLOAB NADPH-DEPENDENT BUTANOL DEHYDROGENASE (EC 1.1.1.-) (BDH) from Clostridium acetobutylicum (388 aa); 69.6% identity in 388 aa overlap
NP_562173.1	similar to gpu:AP001509_234 BH0796 gene product from Bacillus halodurans (500 aa); 43.6% identity in 459 aa overlap
NP_562174.1	similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 23.2% identity in 224 aa overlap
NP_562175.1	partially similar to gp:AF102543_8 unknown from Zymomonas mobilis (318 aa); 40.8% identity in 120 aa overlap
NP_562176.1	similar to prf:2408488H   ORF 142 from Streptococcus thermophilus phage TP-J34 (142 aa); 42.5% identity in 120 aa overlap. 1  transmembrane region was found by PSORT
NP_562177.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_562178.1	no significant homology.
NP_562179.1	similar to sp:GREA_RHIME TRANSCRIPTION ELONGATION FACTOR GREA (TRANSCRIPT CLEAVAGE FACTOR GREA) from Sinorhizobium meliloti (158 aa); 29.5% identity in 149 aa overlap
NP_562180.1	partially similar to sp:NANH_MICVI SIALIDASE PRECURSOR (EC 3.2.1.18) (NEURAMINIDASE) from Micromonospora viridifaciens (647 aa); 36.1% identity in 119 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562181.1	no significant homology.
NP_562182.1	similar to gpu:AF282987_1 beta-galactosidase precursor from Streptococcus pneumoniae (2233 aa); 42.9% identity in 907 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562183.1	similar to sp:YF05_METTH HYPOTHETICAL PROTEIN MTH1505 from Methanobacterium thermoautotrophicum (427 aa); 36.7% identity in 379 aa overlap
NP_562184.1	similar to sp:ADEC_METTH PROBABLE ADENINE DEAMINASE (EC 3.5.4.2) (ADENASE) (ADENINE AMINASE). from Methanobacterium thermoautotrophicum (strain Delta H) (538 aa); 34.7% identity in 513 aa overlap
NP_562185.1	similar to pir:H64117 spermidine/putrescine-binding protein 1 precursor HI1344 from Haemophilus influenzae (strain Rd KW20) (379 aa); 27.2% identity in 298 aa overlap
NP_562186.1	similar to gpu:AB039932_2 riorf36 gene product from Agrobacterium rhizogenes (352 aa); 42.9% identity in 280 aa overlap. 1  transmembrane region was found by PSORT; ATP-binding protein
NP_562187.1	similar to gp:BLLAMLCHA_1  inner membrane protein from Bacillus licheniformis (270 aa); 37.1% identity in 245 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.; permease
NP_562188.1	partially similar to prf:2220324B   attA2 gene from Agrobacterium tumefaciens (300 aa); 42.9% identity in 112 aa overlap.Also partially similar to many ABC transporter proteins (permease). 2  transmembrane regions were found by PSORT.
NP_562189.1	partially similar to gpu:AB039932_1 riorf35 gene product from Agrobacterium rhizogenes (283 aa); 34% identity in 103 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562190.1	partially similar to sp:FLIB_SALTY LYSINE-N-METHYLASE (EC 2.1.1.-) (LYSINE N-METHYLTRANSFERASE) from Salmonella typhimurium (401 aa); 21.8% identity in 394 aa overlap. 1  transmembrane region was found by PSORT
NP_562191.1	similar to pir:C81429 probable transcription regulator Cj0123c from Campylobacter jejuni (strain NCTC 11168) (308 aa); 29% identity in 252 aa overlap
NP_562192.1	similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 33.2% identity in 422 aa overlap
NP_562193.1	similar to gp:LSEXOGC_3 L.sake gene cluster from Lactobacillus sakei (117 aa); 50% identity in 88 aa overlap. 10  transmembrane regions were found by PSORT.
NP_562194.1	similar to gp:LSEXOGC_2 L.sake gene cluster from Lactobacillus sakei (645 aa); 61.4% identity in 573 aa overlap. 16  transmembrane regions were found by PSORT.
NP_562195.1	similar to sp:NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSOR (EC 3.2.1.35) (HYALURONIDASE) (MU TOXIN) from Clostridium perfringens (1042 aa); 37.8% identity in 874 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT; mu-toxin
NP_562196.1	no significant homology.
NP_562197.1	partially similar to pir:T36472 probable secreted alpha-galactosidase from Streptomyces coelicolor (680 aa); 33.6% identity in 140 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562198.1	similar to prf:2516401T   transmembrane protein from Bacillus cereus (441 aa); 25.5% identity in 377 aa overlap. 13  transmembrane regions were found by PSORT.
NP_562199.1	similar to gpu:AP001515_128 transcriptional regulator (GntR family) from Bacillus halodurans (242 aa); 24.9% identity in 229 aa overlap; GntR family
NP_562200.1	similar to gp:D45912_25 pyrimidine nucleoside transport protein from Bacillus subtilis (393 aa); 71.7% identity in 392 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_562201.1	no significant homology.
NP_562202.1	similar to gpu:AE004385_4 conserved hypothetical protein from Vibrio cholerae (170 aa); 43.8% identity in 144 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562203.1	partially similar to pir:C72285 hypothetical protein from Thermotoga maritima (strain MSB8) (718 aa); 22.8% identity in 487 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562204.1	partially similar to gp:HC11504_1 DNA-polymerase from Hebeloma circinans (858 aa); 23.8% identity in 336 aa overlap
NP_562205.1	partially similar to pir:H81403 hypothetical protein Cj0569 from Campylobacter jejuni (strain NCTC 11168) (289 aa); 43.8% identity in 272 aa overlap. 2 transmembrane regions were found by PSORT.
NP_562206.1	similar to pir:E81403 hypothetical protein Cj0566 from Campylobacter jejuni (strain NCTC 11168) (488 aa); 22.4% identity in 504 aa overlap. 2  transmembrane regions were found by PSORT.
NP_562207.1	no significant homology.
NP_562208.1	Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine
NP_562209.1	similar to pir:F69210 conserved hypothetical protein MTH83 from Methanobacterium thermoautotrophicum (strain Delta H) (379 aa); 30.9% identity in 223 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562210.1	partially similar to pir:G36891 transfer complex protein TrsF from Staphylococcus aureus (426 aa); 28.7% identity in 108 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562211.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
NP_562212.1	similar to sp:RNR_BACSU RIBONUCLEASE R (EC 3.1.-.-) (RNASE R) (VACB PROTEIN HOMOLOG) from Bacillus subtilis (779 aa); 52.8% identity in 703 aa overlap
NP_562213.1	similar to sp:SECG_BACSU PROBABLE PROTEIN-EXPORT MEMBRANE PROTEIN SECG from Bacillus subtilis (76 aa); 30.6% identity in 72 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562214.1	similar to pir:A69818 hypothetical protein yhaG from Bacillus subtilis (172 aa); 40.3% identity in 176 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562215.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
NP_562216.1	similar to prf:2408418B gadC gene from Lactococcus lactis (503 aa); 58.1% identity in 475 aa overlap. N-terminal signal sequence and 11  transmembrane regions were found by PSORT.; extreme acid sensitivity protein
NP_562217.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NP_562218.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
NP_562219.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
NP_562220.1	similar to gp:AF043386_2 glyceraldehyde-3-phosphate dehydrogenase from Clostridium acetobutylicum (334 aa); 78.8% identity in 326 aa overlap. (EC 1.2.1.12)
NP_562221.1	similar to gp:AF043386_1 unknown from Clostridium acetobutylicum (276 aa); 45.6% identity in 272 aa overlap; SorC family
NP_562222.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
NP_562223.1	similar to gpu:AP001510_28 BH0853 gene product from Bacillus halodurans (227 aa); 36.8% identity in 209 aa overlap. 1  transmembrane region was found by PSORT
NP_562224.1	no significant homology.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562225.1	similar to prf:2501364A   surface protein from Listeria monocytogenes (357 aa); 36.3% identity in 336 aa overlap
NP_562226.1	similar to prf:2509371A   grrY gene:SUBUNIT=selenoprotein B from Eubacterium acidaminophilum (280 aa); 32.4% identity in 275 aa overlap. 2  transmembrane regions were found by PSORT.
NP_562227.1	similar to prf:2217197C   ORF from Bacillus circulans alkalophilus (144 aa); 41.8% identity in 141 aa overlap. Also similar to many rRNA methylases
NP_562228.1	similar to sp:YXEH_BACSU HYPOTHETICAL 30.2 KDA PROTEIN IN IDH-DEOR INTERGENIC REGION from Bacillus subtilis (270 aa); 35.3% identity in 272 aa overlap
NP_562229.1	partially similar to gpu:AP001512_183 BH1596 gene product from Bacillus halodurans (305 aa); 34.7% identity in 248 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562230.1	similar to prf:2313244A   muramidase from Clostridium perfringens (321 aa); 100% identity in 321 aa overlap; cortical fragment-lytic enzyme
NP_562231.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
NP_562232.1	similar to gpu:AP001512_168 two-component sensor histidine kinase from Bacillus halodurans (594 aa); 29.2% identity in 363 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_562233.1	similar to pir:B71256 conserved hypothetical integral membrane protein TP0986 from Treponema pallidum (294 aa); 40% identity in 275 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_562234.1	similar to gpu:AP001512_285 endonuclease III (DNA repair) from Bacillus halodurans (218 aa); 49.8% identity in 203 aa overlap
NP_562235.1	similar to prf:2403377A sn-glycerol-3-phosphate acyltransferase from Clostridium butyricum (234 aa); 57.1% identity in 233 aa overlap
NP_562236.1	similar to gpu:AP001510_195 BH1020 gene product from Bacillus halodurans (391 aa); 32.7% identity in 297 aa overlap
NP_562237.1	similar to sp:CYSE_HELPY SERINE ACETYLTRANSFERASE (EC 2.3.1.30) (SAT) from Helicobacter pylori (strain 26695) (171 aa); 69.1% identity in 162 aa overlap. 1 transmembrane region was found by PSORT
NP_562238.1	similar to gp:CST130879_2 o-acetylserine sulfhydrylase from Clostridium sticklandii (304 aa); 50.8% identity in 299 aa overlap; cysteine synthase
NP_562239.1	partially similar to gpu:AP001508_234 magnesium (Mg2+) transporter from Bacillus halodurans (452 aa); 29.6% identity in 226 aa overlap
NP_562240.1	similar to gp:AF086736_1 amino acid-binding protein Abp from Streptococcus uberis (277 aa); 41.5% identity in 234 aa overlap; binding protein
NP_562241.1	similar to pir:S77250 hypothetical protein from Synechocystis sp. (strain PCC 6803 (530 aa); 42.4% identity in 172 aa overlap. 3  transmembrane regions were found by PSORT.; permease
NP_562242.1	similar to pir:F71849 amino acid ABC transporter, ATP-binding protei from Helicobacter pylori (strain J99) (248 aa); 43.7% identity in 229 aa overlap; ATP-binding protein
NP_562243.1	no significant homology.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_562244.1	similar to YegS from E. coli
NP_562245.1	similar to gpu:AP001511_199 phosphatidylserine synthase from Bacillus halodurans (179 aa); 38.2% identity in 170 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_562246.1	no significant homology.
NP_562247.1	similar to sp:RUBY_DESVH RUBRERYTHRIN from Desulfovibrio vulgaris (191 aa); 45.1% identity in 175 aa overlap
NP_562248.1	similar to sp:SP5R_BACSU STAGE V SPORULATION PROTEIN R from Bacillus subtilis (468 aa); 40.6% identity in 443 aa overlap
NP_562249.1	similar to gpu:AP001510_206 BH1031 gene product from Bacillus halodurans (388 aa); 38.5% identity in 377 aa overlap
NP_562250.1	similar to sp:PRKA_BACSU PRKA PROTEIN from Bacillus subtilis (631 aa); 39.2% identity in 637 aa overlap
NP_562251.1	similar to pir:F69901 DNA helicase recQ from Bacillus subtilis (591 aa); 38% identity in 587 aa overlap
NP_562252.1	Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate
NP_562253.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
NP_562254.1	similar to gpu:AP001512_22 phosphomethylpyrimidine kinase from Bacillus halodurans (270 aa); 45.8% identity in 262 aa overlap
NP_562255.1	partially similar to gpu:AE004275_8 conserved hypothetical protein from Vibrio cholerae (389 aa); 32.3% identity in 167 aa overlap
NP_562256.1	similar to gpu:AP001514_233 transcriptional regulator (AraC/XylS family) from Bacillus halodurans (347 aa); 41.7% identity in 333 aa overlap; AraC/XylS family
NP_562257.1	similar to gpu:AE004212_7 galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein from Vibrio cholerae (324 aa); 60.4% identity in 303 aa overlap; D-galactose/D-glucose-binding protein
NP_562258.1	with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains
NP_562259.1	ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex
NP_562260.1	similar to gpu:AP001516_184 aldose 1-epimerase (EC 5.1.3.3) from Bacillus halodurans (348 aa); 38.8% identity in 335 aa overlap
NP_562261.1	catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism
NP_562262.1	catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism
NP_562263.1	similar to pir:B72341 uridine kinase-related protein from Thermotoga maritima (strain MSB8) (555 aa); 42.9% identity in 546 aa overlap
NP_562264.1	similar to gpu:AP001511_121 BH1232 gene product from Bacillus halodurans (218 aa); 31.4% identity in 220 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562265.1	no significant homology.  N-terminal signal sequence was found by PSORT
NP_562266.1	similar to sp:ALF_MYCPN FRUCTOSE-BISPHOSPHATE ALDOLASE (EC 4.1.2.13) from Mycoplasma pneumoniae (strain ATCC 29342) (288 aa); 55.2% identity in 286 aa overlap
NP_562267.1	C-terminal portion is similar to gp:CST130879_1 hypothetical protein from Clostridium sticklandii (95 aa); 38.7% identity in 62 aa overlap
NP_562268.1	similar to sp:Y240_METJA HYPOTHETICAL PROTEIN MJ0240 from Methanococcus jannaschii (175 aa); 31.9% identity in 182 aa overlap
NP_562269.1	no significant homology
NP_562270.1	similar to gp:AF192766_1 enterotoxin from Bacillus cereus (419 aa); 23.7% identity in 375 aa overlap. N-terminal signal sequence was found by PSORT
NP_562271.1	no significant homology
NP_562272.1	no significant homology 1  transmembrane region was found by PSORT
NP_562273.1	similar to pir:D69849 transcription regulation homolog yjdI from Bacillus subtilis (159 aa); 56.9% identity in 160 aa overlap
NP_562274.1	partially similar to pir:G71602 protein with DnaJ domain (RESA-like) PFB0925w from Plasmodium falciparum (657 aa); 26.1% identity in 157 aa overlap. 1 transmembrane region was found by PSORT
NP_562275.1	no significant homology 1  transmembrane region was found by PSORT
NP_562276.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562277.1	partially similar to sp:YPIX_CLOPE HYPOTHETICAL 38.4 KDA PROTEIN (ORF10) from Clostridium perfringens plasmid pIP404 (342 aa); 60.4% identity in 144 aa overlap
NP_562278.1	partially similar to pir:B69424 conserved hypothetical protein AF1395 from Archaeoglobus fulgidus (323 aa); 24.6% identity in 183 aa overlap
NP_562279.1	member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions
NP_562280.1	partially similar to gp:SSU40488_1 lacto-N-biosidase precursor from Streptomyces sp (639 aa); 26.6% identity in 482 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562281.1	similar to pir:E71247 hypothetical protein PH0236 from Pyrococcus horikoshii (205 aa); 27.6% identity in 163 aa overlap
NP_562282.1	similar to pir:H64478 hypothetical protein MJ1433 from Methanococcus jannaschii (247 aa); 35.8% identity in 218 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562283.1	partially similar to pir:T37180 probable membrane protein from Streptomyces coelicolor (513 aa); 23.5% identity in 315 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_562284.1	similar to pir:H72357 hypothetical protein TM0599 from Thermotoga maritima (strain MSB8 (546 aa); 30.2% identity in 533 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562285.1	similar to pir:G81269 probable acetyltransferase Cj1715 from Campylobacter jejuni (strain NCTC 11168) (176 aa); 28.4% identity in 155 aa overlap
NP_562286.1	similar to pir:F75515 probable histidinol phosphatase from Deinococcus radiodurans (strain R1) (260 aa); 24.3% identity in 226 aa overlap
NP_562287.1	similar to pir:C71376 probable sodium- and chloride- dependent transporter from Treponema pallidum (443 aa); 36.6% identity in 328 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_562288.1	similar to gpu:AP001510_5 BH0830 gene product from Bacillus halodurans (186 aa); 42.1% identity in 152 aa overlap. 6  transmembrane regions were found by PSORT.
NP_562289.1	similar to sp:HIS8_METTH PROBABLE HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (EC 2.6.1.9) (IMIDAZOLE ACETOL-PHOSPHATE TRANSAMINASE) from Methanobacterium thermoautotrophicum (strain Delta H) (373 aa); 29.9% identity in 351 aa overlap
NP_562290.1	similar to pir:S75587 H+/Ca2+ exchanging protein from Synechocystis sp. (strain PCC 6803) (372 aa); 48.6% identity in 346 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_562291.1	partially similar to gpu:HSJ131F15_2 dJ131F15.2 (phosphodiesterase I/nucleotide pyrophosphatase 1 (homologous to mouse Ly-41 antigen) (PC1, NPPS)) from Homo sapiens (845 aa); 32.1% identity in 218 aa overlap
NP_562292.1	no significant homology 1  transmembrane region was found by PSORT
NP_562293.1	no significant homology
NP_562294.1	similar to gpu:AE004347_10 conserved hypothetical protein from Vibrio cholerae (308 aa); 28.4% identity in 271 aa overlap. 8  transmembrane regions were found by PSORT.
NP_562295.1	similar to pir:F69903 D-alanyl-D-alanine carboxypeptidase homolog yodJ from Bacillus subtilis (273 aa); 39.8% identity in 191 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562296.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562297.1	no significant homology 1  transmembrane region was found by PSORT
NP_562298.1	similar to pir:D83189 methionine aminopeptidase PA3657 from Pseudomonas aeruginosa (strain PAO1) (261 aa); 55.9% identity in 245 aa overlap
NP_562299.1	no significant homology
NP_562300.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562301.1	no significant homology
NP_562302.1	no significant homology
NP_562303.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_562304.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_562305.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
NP_562306.1	similar to sp:LON_BACBR ATP-DEPENDENT PROTEASE LA (EC 3.4.21.53 from Bacillus brevis (779 aa); 51% identity in 770 aa overlap
NP_562307.1	similar to sp:LON2_BACSU ATP-DEPENDENT PROTEASE LA HOMOLOG (EC 3.4.21.-) from Bacillus subtilis (552 aa); 58.2% identity in 507 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562308.1	binds and unfolds substrates as part of the ClpXP protease
NP_562309.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
NP_562310.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
NP_562311.1	similar to sp:YD11_METJA HYPOTHETICAL PROTEIN MJ1311 from Methanococcus jannaschii (293 aa); 26% identity in 262 aa overlap
NP_562312.1	similar to gpu:AP001515_118 ATP-dependent RNA helicase from Bacillus halodurans] (539 aa); 46.8% identity in 524 aa overlap
NP_562313.1	no significant homology. S.D. unclear
NP_562314.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
NP_562315.1	partially similar to pir:A70030 hypothetical protein yvbJ from Bacillus subtilis (605 aa); 22.1% identity in 321 aa overlap. 1  transmembrane region was found by PSORT
NP_562316.1	no significant homology
NP_562317.1	3'-5' exonuclease of DNA polymerase III
NP_562318.1	similar to gpu:AP000419_7 zinc metalloprotease (insulinase) from Arabidopsis thaliana (1052 aa); 36.7% identity in 960 aa overlap; insulinase
NP_562319.1	no significant homology  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562320.1	similar to gp:BSU58864_1 Bacillus subtilis methylase homolog (cspR) gene, complete cds from Bacillus subtilis (174 aa); 31.6% identity in 117 aa overlap. N-terminal signal sequence was found by PSORT
NP_562321.1	similar to pir:G81691 N-acetylmuramoyl-L-alanine amidase, probable TC0539 from Chlamydia muridarum (strain Nigg) (268 aa); 29.1% identity in 172 aa overlap. N-terminal signal sequence was found by PSORT
NP_562323.1	similar to gpu:AF225976_1 flavoredoxin from Desulfovibrio giga (194 aa); 31.7% identity in 145 aa overlap
NP_562324.1	similar to gpu:AE004383_5 conserved hypothetical protein from Vibrio cholerae (468 aa); 28.9% identity in 353 aa overlap. 11  transmembrane regions were found by PSORT.
NP_562325.1	similar to pir:E72398 hypothetical protein TM0244 from Thermotoga maritima (strain MSB8) (451 aa); 41.4% identity in 430 aa overlap. 1  transmembrane region was found by PSORT
NP_562326.1	similar to pir:F72398 Na-translocating NADH-quinone reductase, Nqr2 subunit from Thermotoga maritima (strain MSB8) (318 aa); 39.7% identity in 300 aa overlap. 6 transmembrane regions were found by PSORT.
NP_562327.1	similar to pir:E83269 hypothetical protein PA3012 from Pseudomonas aeruginosa (strain PAO1) (124 aa); 58.5% identity in 53 aa overlap
NP_562328.1	Required for the synthesis of the thiazole moiety
NP_562329.1	similar to pir:F72223 iron-sulfur cofactor synthesis protein TM1692 from Thermotoga maritima (strain MSB8) (384 aa); 42.6% identity in 376 aa overlap
NP_562330.1	similar to gpu:AP001511_103 chorismate mutase from Bacillus halodurans (147 aa); 36% identity in 136 aa overlap
NP_562331.1	similar to gpu:AP001509_227 BH0789 gene product from Bacillus halodurans (777 aa); 41.4% identity in 684 aa overlap
NP_562332.1	similar to sp:YP20_BACLI HYPOTHETICAL P20 PROTEIN from Bacillus licheniformis (178 aa); 38.7% identity in 111 aa overlap
NP_562333.1	similar to N-terminal of pir:B72397 5-methyltetrahydrofolate S-homocysteine methyltransferase from Thermotoga maritima (strain MSB8) (768 aa); 36.6% identity in 268 aa overlap
NP_562334.1	similar to pir:G72223 hypothetical protein TM1693 from Thermotoga maritima (strain MSB8) (247 aa); 42.3% identity in 175 aa overlap
NP_562335.1	similar to pir:H64099 probable amino acid transport protein HI0883, sodium-dependent from Haemophilus influenzae (strain Rd KW20) (456 aa); 58.2% identity in 445 aa overlap.  N-terminal signal sequence and 7 transmembrane regions were found by PSORT.
NP_562336.1	partially similar to pir:C70485 poly A polymerase from Aquifex aeolicus (512 aa); 35.2% identity in 182 aa overlap
NP_562337.1	partially similar to gp:BAMALAMYA_3 membrane protein from Bacillus acidopullulyticus (183 aa); 26.4% identity in 239 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_562338.1	similar to sp:YD33_MYCTU HYPOTHETICAL 33.9 KDA PROTEIN RV1333 from Mycobacterium tuberculosis (strain H37RV) (344 aa); 39.2% identity in 316 aa overlap. 1 transmembrane region was found by PSORT
NP_562339.1	similar to pir:JN0083 small acid-soluble spore protein C2 from Clostridium perfringens (60 aa); 100% identity in 60 aa overlap
NP_562340.1	similar to pir:S74403 hypothetical protein slr0491 from Synechocystis sp. (strain PCC 6803) (144 aa); 29.2% identity in 137 aa overlap
NP_562341.1	catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline
NP_562342.1	similar to pir:A81402 probable integral membrane protein Cj0553 from Campylobacter jejuni (strain NCTC 11168) (317 aa); 37.2% identity in 301 aa overlap. N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_562343.1	similar to pir:H81401 hydrophobic protein Cj0552 from Campylobacter jejuni (strain NCTC 11168) (230 aa); 39.7% identity in 204 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562344.1	similar to pir:S76197 endopeptidase Clp ATP-binding chain B1 from Synechocystis sp. (strain PCC 6803) (867 aa); 55.8% identity in 577 aa overlap
NP_562345.1	similar to gp:AP001516_278 GTP pyrophosphokinase from Bacillus halodurans   (211 aa); 30.2% identity in 139 aa overlap
NP_562346.1	similar to sp:CLS_CLOPE CARDIOLIPIN SYNTHETASE (EC 2.7.8.-) (CARDIOLIPIN SYNTHASE) (CL SYNTHASE) from Clostridium perfringens (476 aa); 99.8% identity in 454 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562347.1	similar to pir:T43862 FAD flavoprotein oxidase from Clostridium perfringens (541 aa); 93% identity in 541 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562348.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
NP_562349.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
NP_562350.1	similar to >pir:T43859 uroporphyrinogen III methylas from Clostridium perfringens (492 aa); 96.3% identity in 492 aa overlap
NP_562351.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
NP_562352.1	catalyzes the formation of siroheme from precorrin-2
NP_562353.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
NP_562354.1	similar to sp:ASRC_SALTY ANAEROBIC SULFITE REDUCTASE SUBUNIT C (EC 1.8.1.-) from Salmonella typhimurium (337 aa); 43.4% identity in 318 aa overlap
NP_562355.1	with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide
NP_562356.1	similar to sp:ASRA_SALTY ANAEROBIC SULFITE REDUCTASE SUBUNIT A (ANAEROBIC SULFITE REDUCTASE IRON-SULFUR SUBUNIT) from Salmonella typhimurium (347 aa); 45.3% identity in 333 aa overlap
NP_562357.1	similar to pir:T36556 probable transcription regulator from Streptomyces coelicolor (224 aa); 22.9% identity in 192 aa overlap; Crp/Fnr family
NP_562358.1	similar to pir:S39703 nitrite transport protein homolog ywcJ from Bacillus subtilis (256 aa); 37.9% identity in 214 aa overlap. 7  transmembrane regions were found by PSORT.
NP_562359.1	similar to no homology from (410 aa); 28.3% identity in 127 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562360.1	similar to pir:A69742 conserved hypothetical protein yazA from Bacillus subtilis (99 aa); 51.6% identity in 91 aa overlap. S.D. unclear
NP_562361.1	similar to gp:AB042614_1 beta-1,4-xylosidase with transcriptional regulator of AraC/XylS family from Aeromonas caviae (745 aa); 26.2% identity in 237 aa overlap; AraC/XylS family
NP_562362.1	similar to prf:2105286A   transcriptional activator from Lactobacillus sp (424 aa); 22.4% identity in 398 aa overlap
NP_562363.1	partially similar to prf:1616280A neutral protease transcriptional activator from Bacillus stearothermophilus (406 aa); 22.2% identity in 144 aa overlap. ATA start
NP_562364.1	partially similar to pir:JC6007 transcription activator plcR from Bacillus thuringiensis (285 aa); 27.8% identity in 144 aa overlap
NP_562365.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562366.1	similar to pir:B72269 ribonuclease H-related protein from Thermotoga maritima (strain MSB8) (223 aa); 37.1% identity in 205 aa overlap
NP_562367.1	similar to pir:G69161 conserved hypothetical protein MTH471 from Methanobacterium thermoautotrophicum (strain Delta H) (138 aa); 24.8% identity in 105 aa overlap. 3  transmembrane regions were found by PSORT.
NP_562368.1	partially similar to sp:YQGP_BACSU HYPOTHETICAL 56.4 KDA PROTEIN IN SODA-COMGA INTERGENIC REGION. from Bacillus subtilis (507 aa); 43% identity in 151 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562369.1	similar to pir:T44581 thimet oligopeptidase (EC 3.4.24.15) from Bacillus licheniformis (628 aa); 46.4% identity in 603 aa overlap
NP_562370.1	no significant homology
NP_562371.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562372.1	similar to pir:E71375 probable ABC transporter, ATP-binding protein from Treponema pallidum (238 aa); 37.3% identity in 212 aa overlap; ATP-binding protein
NP_562373.1	similar to pir:F71375 probable ABC transporter, permease from [Treponema pallidum (266 aa); 41.7% identity in 242 aa overlap. 7  transmembrane regions were found by PSORT.; permease
NP_562374.1	no significant homology 1  transmembrane region was found by PSORT
NP_562375.1	similar to pir:H72331 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (464 aa); 26.3% identity in 411 aa overlap. 10  transmembrane regions were found by PSORT.
NP_562376.1	no significant homology
NP_562377.1	no significant homology
NP_562378.1	similar to sp:FUR_CAMJE FERRIC UPTAKE REGULATION PROTEIN (FERRIC UPTAKE REGULATOR) from Campylobacter jejuni (strain NCTC 11168) (157 aa); 33.8% identity in 133 aa overlap
NP_562379.1	similar to sp:PTND_ECOLI PTS SYSTEM, MANNOSE-SPECIFIC IID COMPONENT (EIID-MAN) (MANNOSE- PERMEASE IID COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, D COMPONENT) (EII-M-MAN) from Escherichia coli (286 aa); 34.8% identity in 247 aa overlap. 4  transmembrane regions were found by PSORT.; mannose-specific IID component
NP_562380.1	similar to gp:VFU65015_2 PTS permease for mannose subunit IIPMan from Vibrio furnissii (258 aa); 30.3% identity in 221 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; mannose-specific IIC component
NP_562381.1	similar to pir:WQECM3 phosphotransferase system enzyme II (EC 2.7.1.69), mannose-specific, factor IIAB from Escherichia coli (323 aa); 30.2% identity in 139 aa overlap; mannose-specific IIAB component
NP_562382.1	partially similar to gp:AF130465_1 mannose-specific phosphotransferase system component IIAB from Streptococcus salivarius (330 aa); 31.6% identity in 95 aa overlap. 1  transmembrane region was found by PSORT; mannose-specific IIAB component
NP_562383.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
NP_562384.1	no significant homology 1  transmembrane region was found by PSORT
NP_562385.1	similar to pir:T35528 probable aminotransferase from Streptomyces coelicolor (476 aa); 32.1% identity in 414 aa overlap. 1  transmembrane region was found by PSORT
NP_562386.1	similar to gpu:AP001508_273 ABC transporter (ATP-binding protein) from Bacillus halodurans (642 aa); 37.9% identity in 634 aa overlap; ATP-binding protein
NP_562387.1	similar to pir:H69888 deoxyuridine 5'-triphosphate pyrophosphatase homolog yncF from Bacillus subtili (144 aa); 48.1% identity in 154 aa overlap
NP_562388.1	no significant homology
NP_562389.1	no significant homology 1  transmembrane region was found by PSORT
NP_562390.1	similar to pir:H75342 probable hemolysin Deinococcus radiodurans (strain R1) from Deinococcus radiodurans (strain R1) (219 aa); 36.3% identity in 212 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_562391.1	similar to sp:YEIE_ECOLI HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN LYSP-NFO INTERGENIC REGION from Escherichia coli (293 aa); 34.7% identity in 285 aa overlap. 1  transmembrane region was found by PSORT; LysR-family
NP_562392.1	no significant homology  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562393.1	similar to pir:F69829 endo-1,4-beta-xylanase homolog yheN from Bacillus subtilis (282 aa); 35.4% identity in 198 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562394.1	no significant homology
NP_562395.1	no significant homology
NP_562396.1	similar to gpu:AE004350_10 sulfate permease from Vibrio cholera (553 aa); 43.4% identity in 535 aa overlap. 10  transmembrane regions were found by PSORT.
NP_562397.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562398.1	similar to sp:YEIC_ECOLI HYPOTHETICAL SUGAR KINASE IN NFO-FRUA INTERGENIC REGIO from Escherichia coli (313 aa); 33.7% identity in 306 aa overlap
NP_562399.1	similar to gpu:AE004172_2 hypothetical protein from Vibrio cholerae (63 aa); 36.1% identity in 61 aa overlap
NP_562400.1	similar to pir:A71849 hypothetical protein jhp1110 from Helicobacter pylori (strain J99) (459 aa); 27.3% identity in 436 aa overlap. 11  transmembrane regions were found by PSORT.
NP_562401.1	similar to gpu:AP001511_100 ABC transporter (ATP-binding protein) from Bacillus halodurans (264 aa); 39.3% identity in 206 aa overlap; ATP-binding protein
NP_562402.1	similar to pir:E72405 ABC transporter, permease, cysTW family from Thermotoga maritima (strain MSB8) (243 aa); 23.9% identity in 226 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permeaese protein
NP_562403.1	similar to pir:D72405 hypothetical protein from Thermotoga maritima (strain MSB8) (300 aa); 29.7% identity in 266 aa overlap
NP_562404.1	no significant homology
NP_562405.1	no significant homology
NP_562406.1	no significant homology  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_562407.1	no significant homology
NP_562408.1	partially similar to sp:APL_LACLC ALKALINE PHOSPHATASE LIKE PROTEIN from Lactococcus lactis (242 aa); 28% identity in 157 aa overlap. 4  transmembrane regions were found by PSORT.
NP_562409.1	similar to pir:B81322 probable integral membrane protein (dedA homolog) Cj1168c from Campylobacter jejuni (strain NCTC 11168) (200 aa); 29.7% identity in 158 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562410.1	similar to gpu:AE004222_1 conserved hypothetical protein from Vibrio cholerae (310 aa); 33.1% identity in 275 aa overlap
NP_562411.1	no significant homology
NP_562412.1	ACT domain-containing protein
NP_562413.1	similar to pir:C81059 conserved hypothetical protein NMB1652 from Neisseria meningitidis (group B strain MD58) (451 aa); 69% identity in 449 aa overlap. 1 transmembrane region was found by PSORT
NP_562414.1	no significant homology  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562415.1	similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.7% identity in 246 aa overlap
NP_562416.1	similar to pir:C55521 virS protein from Clostridium perfringens (440 aa); 85.7% identity in 440 aa overlap. 5 transmembrane regions were found by PSORT.
NP_562417.1	similar to pir:S60139 virR protein from Clostridium perfringens (252 aa); 100% identity in 237 aa overlap
NP_562418.1	similar to pir:S49554 hypothetical protein 10C from Clostridium perfringens (337 aa); 95.5% identity in 337 aa overlap
NP_562419.1	similar to sp:YVI2_CLOPE HYPOTHETICAL 10.7 KDA PROTEIN IN VIRR 5'REGION (ORF2) from Clostridium perfringens (95 aa); 100% identity in 95 aa overlap
NP_562420.1	similar to sp:YABE_BACSU HYPOTHETICAL 47.7 KDA PROTEIN IN METS-KSGA INTERGENIC REGION from Bacillus subtilis (437 aa); 33.8% identity in 305 aa overlap. 1 transmembrane region was found by PSORT
NP_562421.1	similar to sp:URAA_ECOLI URACIL PERMEASE (URACIL TRANSPORTER) from Escherichia coli (429 aa); 54.7% identity in 411 aa overlap. 12  transmembrane regions were found by PSORT.
NP_562422.1	similar to pir:E69861 ABC transporter (ATP-binding protein) homolog ykpA from Bacillus subtilis (540 aa); 70.7% identity in 525 aa overlap; ATP-binding protein
NP_562423.1	similar to pir:F69829 endo-1,4-beta-xylanase homolog yheN from Bacillus subtilis> (282 aa); 32.3% identity in 192 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562424.1	decatenates replicating daughter chromosomes
NP_562425.1	similar to pir:F69772 hypothetical protein ydbT from Bacillus subtilis (493 aa); 20.4% identity in 457 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562426.1	similar to gpu:AP001512_307 BH1720 gene product from Bacillus halodurans (159 aa); 29.7% identity in 91 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562427.1	no significant homology
NP_562428.1	similar to gpu:AE003965_12 hypothetical protein from Xylella fastidiosa (1197 aa); 21.8% identity in 1080 aa overlap. Also similar to many sensor histidine kinases..  N-terminal signal sequence and 1  transmembrane region were found by PSORT; hybrid
NP_562429.1	similar to gp:AF115542_1 unknown from Desulfitobacterium dehalogenans (388 aa); 25.9% identity in 363 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562430.1	similar to prf:2212278A   algI gene from Pseudomonas aeruginosa (520 aa); 41.3% identity in 387 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_562431.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562432.1	similar to gpu:AP001518_179 RNA helicase from Bacillus halodurans (389 aa); 38.2% identity in 377 aa overlap
NP_562433.1	no significant homology
NP_562434.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
NP_562435.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_562436.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
NP_562437.1	partially similar to sp:CAPA_STAAU CAPA PROTEIN from Staphylococcus aureus (221 aa); 23.7% identity in 114 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562438.1	no significant homology
NP_562439.1	similar to >sp:NAGH_CLOPE HYALURONOGLUCOSAMINIDASE PRECURSOR (EC 3.2.1.35) (HYALURONIDASE) (MU TOXIN from Clostridium perfringens (1042 aa); 27.8% identity in 946 aa overlap
NP_562440.1	C-terminal portion is similar to sp:YAV4_XANCV HYPOTHETICAL 12 KDA AVIRULENCE PROTEIN IN AVRBS1 REGION from Xanthomonas campestris (104 aa); 39.6% identity in 91 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562441.1	similar to pir:S72638 hypothetical ABC exporter component B from Thermoanaerobacterium thermosulfurigenes (594 aa); 54% identity in 589 aa overlap. 6  transmembrane regions were found by PSORT.; ATP-binding protein
NP_562442.1	similar to pir:S72637 hypothetical ABC exporter component A from Thermoanaerobacterium thermosulfurigenes (582 aa); 50.5% identity in 562 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.; ATP-binding protein
NP_562443.1	no significant homology 1  transmembrane region was found by PSORT
NP_562444.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562445.1	partially similar to gp:AB001488_13 ydaL gene product from Bacillus subtilis (576 aa); 29.3% identity in 208 aa overlap
NP_562446.1	no significant homology  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562447.1	similar to gp:AF059741_4 fructokinase from Clostridium beijerinckii (312 aa); 60.3% identity in 310 aa overlap
NP_562448.1	similar to gp:AF059741_3 sucrose-6-P hydrolase from Clostridium beijerinckii (485 aa); 51.1% identity in 479 aa overlap
NP_562449.1	similar to gp:AF059741_2 sucrose repressor from Clostridium beijerinckii (330 aa); 62.5% identity in 320 aa overlap
NP_562450.1	similar to gp:AF059741_1 sucrose-specific PTS permease from Clostridium beijerinckii (451 aa); 69.4% identity in 448 aa overlap. 10  transmembrane regions were found by PSORT.; sucrose-specific IIBC component
NP_562451.1	partially similar to pir:C81254 hypothetical protein Cj1589 from Campylobacter jejuni (strain NCTC 11168) (265 aa); 31.7% identity in 82 aa overlap
NP_562452.1	similar to sp:ASRC_SALTY ANAEROBIC SULFITE REDUCTASE SUBUNIT C (EC 1.8.1.-) from Salmonella typhimurium (337 aa); 50% identity in 334 aa overlap
NP_562453.1	with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide
NP_562454.1	similar to sp:ASRA_SALTY ANAEROBIC SULFITE REDUCTASE SUBUNIT A (ANAEROBIC SULFITE REDUCTASE IRON-SULFUR SUBUNIT) from Salmonella typhimurium (347 aa); 39.5% identity in 342 aa overlap
NP_562455.1	no significant homology  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562456.1	similar to sp:YKNZ_BACSU HYPOTHETICAL 42.1 KDA PROTEIN IN MOAD-FRUR INTERGENIC REGION from Bacillus subtilis (397 aa); 30.1% identity in 392 aa overlap. 4 transmembrane regions were found by PSORT.; ATP-binding protein
NP_562457.1	similar to sp:YF08_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1508 from Methanococcus jannaschii (224 aa); 53.2% identity in 222 aa overlap; ATP-binding protein
NP_562458.1	similar to pir:B70048 conserved hypothetical protein yvrP from Bacillus subtilis (397 aa); 28.9% identity in 374 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562459.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
NP_562460.1	catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine
NP_562461.1	similar to sp:BIOY_BACSH BIOY PROTEIN from Bacillus sphaericus (215 aa); 43.4% identity in 173 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562462.1	similar to sp:YPUA_BACSU HYPOTHETICAL 31.3 KDA PROTEIN IN LYSA-PPIB INTERGENIC REGION (ORFX19) from Bacillus subtilis (290 aa); 31% identity in 271 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562463.1	similar to gp:AB015670_7 Bacillus sp. genes for CDase, CGTase, MBP and 15 ORFs, partial and complete cds from Bacillus sp (549 aa); 45% identity in 522 aa overlap.Also similar to prf:2516401X stage V sporulation protein K from Bacillus cereus
NP_562464.1	similar to pir:S66017 formate dehydrogenase homolog yyaE from Bacillus subtilis (667 aa); 32.1% identity in 667 aa overlap
NP_562465.1	Catalyzes the formation of PRPP from ATP and ribose 5-phosphate
NP_562466.1	no significant homology
NP_562467.1	similar to pir:F69829 endo-1,4-beta-xylanase homolog yheN from Bacillus subtilis (282 aa); 31.9% identity in 226 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562468.1	similar to gp:BTU67061_1 pullulanase from Bacteroides thetaiotaomicron (668 aa); 45.2% identity in 615 aa overlap
NP_562469.1	similar to sp:LEPC_BACCL SIGNAL PEPTIDASE I (EC 3.4.21.89) (SPASE I) (LEADER PEPTIDASE I) from Bacillus caldolyticus (182 aa); 47.3% identity in 129 aa overlap. N-terminal signal sequence was found by PSORT
NP_562470.1	no significant homology
NP_562471.1	no significant homology
NP_562472.1	partially similar to sp:CGMA_RHIME  CYCLIC BETA-1,2-GLUCAN MODIFICATION PROTEIN from Rhizobium melioti (639 aa); 30.8% identity in 383 aa overlap. 5 transmembrane regions were found by PSORT.
NP_562473.1	similar to gpu:AP001512_51 BH1464 gene product from Bacillus halodurans (326 aa); 29.7% identity in 313 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562474.1	similar to pir:G72259 probable di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31) from Thermotoga maritima (strain MSB8) (233 aa); 33.8% identity in 213 aa overlap
NP_562475.1	similar to pir:T31463 probable diapophytoene dehydrogenase crtN from Heliobacillus mobilis (517 aa); 31% identity in 480 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562476.1	similar to sp:YK27_AQUAE HYPOTHETICAL PROTEIN AQ_2027 from Aquifex aeolicus (364 aa); 47.9% identity in 165 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562477.1	no significant homology 5  transmembrane regions were found by PSORT.
NP_562478.1	no significant homology 4  transmembrane regions were found by PSORT.
NP_562479.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562480.1	similar to gpu:AP001515_27 BH2293 gene product from Bacillus halodurans (212 aa); 30.2% identity in 129 aa overlap. ATA start. 5  transmembrane regions were found by PSORT.
NP_562481.1	similar to gpu:AP001508_188 BH0465 gene product from Bacillus halodurans (318 aa); 38.7% identity in 331 aa overlap.  N-terminal signal sequence and 8 transmembrane regions were found by PSORT.
NP_562482.1	similar to gpu:AE004300_1 DNA-damage-inducible protein P from Vibrio cholerae (360 aa); 40.8% identity in 336 aa overlap
NP_562483.1	similar to sp:CYPB_BACSU PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B (EC 5.2.1.8) (PPIASE B) (ROTAMASE B) from Bacillus subtilis (143 aa); 51.3% identity in 117 aa overlap
NP_562484.1	no significant homology
NP_562485.1	similar to gpu:AP001508_220 BH0497 gene product from Bacillus halodurans (247 aa); 30.7% identity in 274 aa overlap
NP_562486.1	similar to sp:IM30_PEA CHLOROPLAST MEMBRANE-ASSOCIATED 30 KDA PROTEIN PRECURSOR (M30) from Pisum sativum (323 aa); 24.6% identity in 240 aa overlap. Also similar to many phage shock proteins
NP_562487.1	no significant homology 1  transmembrane region was found by PSORT
NP_562488.1	no significant homology
NP_562489.1	Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine
NP_562490.1	partially similar to pir:E71657 hypothetical protein RP534 from Rickettsia prowazekii (598 aa); 28.3% identity in 173 aa overlap
NP_562491.1	similar to gpu:AE004299_6 conserved hypothetical protein from Vibrio cholerae (430 aa); 43% identity in 430 aa overlap. 12  transmembrane regions were found by PSORT.
NP_562492.1	similar to pir:H72254 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (131 aa); 34.8% identity in 112 aa overlap
NP_562493.1	similar to pir:F70009 conserved hypothetical protein yufQ from Bacillus subtilis (319 aa); 42.8% identity in 152 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.; permease
NP_562494.1	similar to gpu:CST276209_12  permease 1 of an ABC transporter from Clostridium sticklandii (354 aa); 43% identity in 316 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_562495.1	similar to pir:D70009 probable ABC transporter yufO from Bacillus subtilis (510 aa); 61.8% identity in 502 aa overlap; ATP-binding protein
NP_562496.1	similar to sp:TMPC_TREPA MEMBRANE LIPOPROTEIN TMPC PRECURSOR (MEMBRANE PROTEIN C) (35 KDA ANTIGEN) from Treponema pallidum (353 aa); 37.5% identity in 333 aa overlap. 1  transmembrane region was found by PSORT
NP_562497.1	partially similar to pir:C75472 probable lipase from Deinococcus radiodurans (strain R1) (454 aa); 26.9% identity in 216 aa overlap.Also similar to pir:T43794 probable lipase lipA from Clostridium perfringens
NP_562498.1	partially similar to pir:F75200 hypothetical protein PAB2261 from Pyrococcus abyssi (strain Orsay) (248 aa); 31.5% identity in 127 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562499.1	similar to pir:H69858 cation ABC transporter (ATP-binding protein) homolog ykoD from Bacillus subtilis (490 aa); 31.6% identity in 488 aa overlap. 1 transmembrane region was found by PSORT; ATP-binding protein
NP_562500.1	similar to gp:LLA012388_6 hypothetical protein from Lactococcus lactis (182 aa); 51.1% identity in 184 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562501.1	similar to pir:T44113 conserved hypothetical protein from Staphylococcus aureus (131 aa); 48.1% identity in 77 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562502.1	no significant homology
NP_562503.1	similar to sp:PULA_THEMA PULLULANASE PRECURSOR (EC 3.2.1.41) (ALPHA-DEXTRIN ENDO-1,6-ALPHA- GLUCOSIDASE) (PULLULAN 6-GLUCANOHYDROLASE) from Thermotoga maritima (strain MSB8) (843 aa); 37.1% identity in 832 aa overlap
NP_562504.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
NP_562505.1	similar to sp:YYBI_BACSU HYPOTHETICAL 30.1 KDA PROTEIN IN COTF-TETB INTERGENIC REGION from Bacillus subtilis (262 aa); 33.3% identity in 132 aa overlap. 1 transmembrane region was found by PSORT
NP_562506.1	similar to gpu:AP001507_81 BH0081 gene product from Bacillus halodurans (251 aa); 31.3% identity in 217 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562507.1	similar to gpu:AP001507_82 BH0082 from Bacillus halodurans (150 aa); 34.1% identity in 135 aa overlap. N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562508.1	partially similar to prf:2117382A   alpha toxin from Clostridium novyi (2178 aa); 25.4% identity in 197 aa overlap
NP_562509.1	similar to gp:D85082_8 YfiX from Bacillus subtilis (610 aa); 34.9% identity in 476 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562510.1	no significant homology 1  transmembrane region was found by PSORT
NP_562511.1	similar to pir:G69781 thioredoxin homolog ydfQ from Bacillus subtilis (112 aa); 31% identity in 84 aa overlap. 1  transmembrane region was found by PSORT
NP_562512.1	similar to >pir:S41858 hypothetical protein from Thermoanaerobacterium saccharolyticum (320 aa); 48.8% identity in 303 aa overlap
NP_562513.1	similar to gpu:AP001520_185 BH3961 gene product from Bacillus halodurans (295 aa); 32.8% identity in 247 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562514.1	no significant homology
NP_562515.1	similar to pir:D75087 thiamin phosphate pyrophosphorylase (thie) PAB1645 from Pyrococcus abyssi (strain Orsay) (207 aa); 30.6% identity in 193 aa overlap
NP_562516.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center
NP_562517.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
NP_562518.1	catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate
NP_562519.1	similar to pir:C69845 hypothetical protein yjbS from Bacillus subtilis (66 aa); 50% identity in 62 aa overlap
NP_562520.1	similar to pir:G69804 multidrug-efflux transporter homolog yfiU from Bacillus subtilis (518 aa); 36.9% identity in 425 aa overlap.  N-terminal signal sequence and 12  transmembrane regions were found by PSORT.
NP_562521.1	similar to pir:C59107 hypothetical protein pXO1-131 from Bacillus anthracis virulence plasmid pXO1 (349 aa); 40.2% identity in 266 aa overlap
NP_562522.1	no significant homology
NP_562523.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
NP_562524.1	similar to gp:AF117259_1 replication protein from Staphylococcus aureus (303 aa); 27.2% identity in 103 aa overlap
NP_562525.1	no significant homology
NP_562526.1	similar to pir:F69829 endo-1,4-beta-xylanase homolog yheN from Bacillus subtilis (282 aa); 31.6% identity in 231 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562527.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562528.1	similar to sp:YTXB_BACSU HYPOTHETICAL 23.3 KDA PROTEIN IN DNAI-THRS INTERGENIC REGION (ORF-213) from Bacillus subtilis (213 aa); 23.2% identity in 151 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_562529.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562530.1	similar to gpu:AP001519_115 cell wall-binding protein from Bacillus halodurans (461 aa); 27.3% identity in 429 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562531.1	no significant homology
NP_562532.1	no significant homology
NP_562533.1	no significant homology
NP_562534.1	no significant homology
NP_562535.1	similar to pir:H70040 hypothetical protein yvgS from Bacillus subtilis (774 aa); 29.9% identity in 699 aa overlap
NP_562536.1	no significant homology
NP_562537.1	similar to gpu:AP001508_150 BH0427 gene product from Bacillus haloduran (301 aa); 36.9% identity in 268 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562538.1	similar to sp:YYBI_BACSU HYPOTHETICAL 30.1 KDA PROTEIN IN COTF-TETB INTERGENIC REGION from Bacillus subtilis (262 aa); 27.3% identity in 227 aa overlap
NP_562539.1	no significant homology 1  transmembrane region was found by PSORT
NP_562540.1	partially similar to gp:KPN250891_3 virulence protein Q from Klebsiella pneumoniae (328 aa); 27.1% identity in 118 aa overlap. 9  transmembrane regions were found by PSORT.
NP_562541.1	similar to prf:2516401B SNF gene from Bacillus cereus (1064 aa); 34.4% identity in 868 aa overlap
NP_562542.1	similar to gpu:AP001519_242 transcriptional repressor of the ribose operon from Bacillus halodurans (331 aa); 38.1% identity in 310 aa overlap. 1 transmembrane region was found by PSORT; LacI family
NP_562543.1	similar to sp:RBSB_BACSU D-RIBOSE-BINDING PROTEIN PRECURSOR from Bacillus subtilis (305 aa); 55.7% identity in 131 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing)
NP_562544.1	similar to sp:RBSB_ECOLI D-RIBOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR from Escherichia coli (296 aa); 56.6% identity in 166 aa overlap. Truncated by frameshift mutation (confirmed by PCR-direct sequencing). N-terminal signal sequence was found by PSORT
NP_562545.1	similar to gpu:AE004354_5 ribose ABC transporter, permease from Vibrio cholerae (332 aa); 45.4% identity in 295 aa overlap.  N-terminal signal sequence and 7 transmembrane regions were found by PSORT.
NP_562546.1	similar to gp:ECOUW82_115 high affinity ribose transport protein from Escherichia coli (501 aa); 52.2% identity in 492 aa overlap; ATP-binding protein
NP_562547.1	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source
NP_562548.1	similar to gp:AF115391_7 ribokinase RbsK (EC 2.7.1.15) from Lactobacillus sakei (302 aa); 48% identity in 302 aa overlap
NP_562549.1	similar to sp:DEF_CLOAB POLYPEPTIDE DEFORMYLASE (EC 3.5.1.31) (PDF) (FORMYLMETHIONINE DEFORMYLASE) from Clostridium acetobutylicum (150 aa); 45.9% identity in 148 aa overlap; formylmethionine deformylase
NP_562550.1	similar to pir:B69721 teichoic acid linkage unit synthesis tagO from Bacillus subtilis (358 aa); 35.1% identity in 305 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_562551.1	similar to gpu:AP001508_15 BH0292 gene product from Bacillus halodurans (177 aa); 35.7% identity in 84 aa overlap; ArsR family
NP_562552.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex
NP_562553.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex
NP_562554.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex
NP_562555.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the F subunit is part of the catalytic core of the ATP synthase complex
NP_562556.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the C subunit is part of the catalytic core of the ATP synthase complex
NP_562557.1	similar to sp:ATPE_METJA ATP SYNTHASE, SUBUNIT E (EC 3.6.1.34).>pir:E64327 H+-transporting ATP synthase (EC 3.6.1.34) subunit E from Methanococcus jannaschii (206 aa); 34% identity in 197 aa overlap
NP_562558.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits
NP_562559.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.
NP_562560.1	similar to sp:Y223_METJA HYPOTHETICAL PROTEIN MJ0223 from Methanococcus jannaschii (104 aa); 39.8% identity in 88 aa overlap
NP_562561.1	similar to gpu:AP001517_74 Mg-protoporphyrin IX monomethyl ester oxidative cyclas from Bacillus halodurans (592 aa); 39.4% identity in 503 aa overlap
NP_562562.1	no significant homology
NP_562563.1	partially similar to gp:AF226444_1  lipoprotein GNA2132 from Neisseria meningitidis (486 aa); 27.5% identity in 204 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562564.1	similar to sp:SP5B_BACSU STAGE V SPORULATION PROTEIN B from Bacillus subtilis (518 aa); 23.9% identity in 493 aa overlap.  N-terminal signal sequence and 3 transmembrane regions were found by PSORT.
NP_562565.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562566.1	similar to gpu:AE004229_1 conserved hypothetical protein from Vibrio cholera (298 aa); 34.9% identity in 281 aa overlap
NP_562567.1	similar to pir:G70443 conserved hypothetical protein aq_1660 from Aquifex aeolicus (172 aa); 49.4% identity in 162 aa overlap
NP_562568.1	partially similar to pir:H72357 hypothetical protein TM0599 from Thermotoga maritima (strain MSB8) (546 aa); 32% identity in 275 aa overlap
NP_562569.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562570.1	similar to gpu:AE004098_5 transcriptional regulator AsnC from Vibrio cholerae (153 aa); 46.6% identity in 131 aa overlap; AsnC family
NP_562571.1	similar to gpu:AP001518_176 BH3345 gene product from Bacillus halodurans (75 aa); 59.6% identity in 57 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562572.1	partially similar to sp:PPCK_ECOLI PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP] (EC 4.1.1.49) from Escherichia coli (540 aa); 30.4% identity in 194 aa overlap
NP_562573.1	similar to pir:T44344 late competence protein homolog comEC from Bacillus halodurans (266 aa); 33.5% identity in 242 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562574.1	no significant homology
NP_562575.1	similar to gpu:AE004281_9 ferrous iron transport protein A from Vibrio cholerae (76 aa); 40.6% identity in 69 aa overlap
NP_562576.1	similar to pir:C69549 iron (II) transporter (feoB-2) homolog from Archaeoglobus fulgidus (563 aa); 38.9% identity in 579 aa overlap. 7  transmembrane regions were found by PSORT.
NP_562577.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
NP_562578.1	similar to gpu:AP001511_282 exopolyphosphatase from Bacillus halodurans (518 aa); 25.9% identity in 495 aa overlap
NP_562579.1	similar to gp:SCM10_29  lipoprotein from Streptomyces coelicolor A3(2) (384 aa); 29.7% identity in 256 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562580.1	similar to pir:D70057 conserved hypothetical protein ywhC from Bacillus subtilis (219 aa); 38.7% identity in 155 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562581.1	similar to pir:A69873 phosphate starvation inducible protein homolog ylaK from Bacillus subtilis (442 aa); 42% identity in 459 aa overlap
NP_562582.1	partially similar to gp:AE002349_1 DNA polymerase III, epsilon subunit,  from Chlamydia muridarum (250 aa); 31.5% identity in 111 aa overlap
NP_562583.1	similar to gp:AE002154_2 single-strand binding protein from Ureaplasma urealyticum (166 aa); 25.7% identity in 105 aa overlap
NP_562584.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
NP_562585.1	similar to sp:PTHP_STAAU PHOSPHOCARRIER PROTEIN HPR (HISTIDINE-CONTAINING PROTEIN) from Staphylococcus aureus (88 aa); 56.5% identity in 69 aa overlap
NP_562586.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
NP_562587.1	similar to >gpu:AP001515_109 stage V sporulation protein S from Bacillus halodurans (86 aa); 81.4% identity in 86 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562588.1	protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP
NP_562589.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
NP_562590.1	similar to gpu:AP001515_120 phosphatidylglycerophosphate synthase from Bacillus halodurans (192 aa); 46.4% identity in 192 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562591.1	similar to sp:Y849_AQUAE HYPOTHETICAL PROTEIN AQ_849 from Aquifex aeolicus (432 aa); 46% identity in 433 aa overlap
NP_562592.1	similar to gp:AF177859_1 sporulation protein SpoIIIE from Sporosarcina ureae (780 aa); 44.4% identity in 768 aa overlap. 6  transmembrane regions were found by PSORT.
NP_562593.1	similar to gpu:AP001515_131 BH2397 gene product from Bacillus halodurans (256 aa); 59.7% identity in 196 aa overlap
NP_562594.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive
NP_562595.1	similar to gpu:AP001515_138 BH2404 gene product from Bacillus halodurans (82 aa); 33.3% identity in 75 aa overlap
NP_562596.1	similar to pir:S70691 polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) alpha chain pnpA from Bacillus subtilis (705 aa); 55% identity in 693 aa overlap. 1  transmembrane region was found by PSORT
NP_562597.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
NP_562598.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
NP_562599.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
NP_562600.1	similar to pir:F70440 conserved hypothetical protein aq_1630 from Aquifex aeolicus (325 aa); 39.2% identity in 296 aa overlap
NP_562601.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
NP_562602.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NP_562603.1	similar to sp:YLXQ_BACSU PROBABLE RIBOSOMAL PROTEIN IN NUSA-INFB INTERGENIC REGION (ORF4) from Bacillus subtilis (100 aa); 30.7% identity in 88 aa overlap
NP_562604.1	similar to gpu:AP001515_149 BH2415 gene product from Bacillus halodurans (91 aa); 50% identity in 88 aa overlap
NP_562605.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
NP_562606.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
NP_562607.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity
NP_562608.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
NP_562609.1	similar to sp:YI21_SYNY3 HYPOTHETICAL 39.0 KDA PROTEIN SLR1821 from Synechocystis sp. (366 aa); 34.7% identity in 291 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562610.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
NP_562611.1	similar to gpu:AP001515_156 phosphatidate cytidylyltransferase (EC 2.7.7.41) from Bacillus halodurans (264 aa); 34.7% identity in 239 aa overlap. N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_562612.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
NP_562613.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
NP_562614.1	Catalyzes the phosphorylation of UMP to UDP
NP_562615.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
NP_562616.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
NP_562617.1	CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
NP_562618.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
NP_562619.1	similar to gpu:AE004096_2 smf protein from Vibrio cholerae (371 aa); 39.3% identity in 275 aa overlap
NP_562620.1	similar to pir:G72368 comM protein from Thermotoga maritima (strain MSB8) (501 aa); 45% identity in 467 aa overlap
NP_562621.1	similar to pir:A82030 hypothetical protein NMA0341 from Neisseria meningitidis (group A strain Z2491) (115 aa); 28% identity in 100 aa overlap
NP_562622.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
NP_562623.1	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)
NP_562624.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NP_562625.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
NP_562626.1	Essential for efficient processing of 16S rRNA
NP_562627.1	similar to sp:Y696_BORBU HYPOTHETICAL PROTEIN BB0696 from Borrelia burgdorferi (82 aa); 55.3% identity in 76 aa overlap
NP_562628.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
NP_562629.1	similar to gpu:AP001515_218 signal recognition particle from Bacillus halodurans (451 aa); 56.4% identity in 443 aa overlap
NP_562630.1	similar to gpu:AP001515_219 BH2485 gene product from Bacillus halodurans (109 aa); 43.8% identity in 96 aa overlap
NP_562631.1	similar to gpu:AP001515_220 signal recognition particle (docking protein) from Bacillus halodurans (330 aa); 48.5% identity in 297 aa overlap
NP_562632.1	similar to sp:SMC_BACSU CHROMOSOME PARTITION PROTEIN SMC from Bacillus subtilis (1186 aa); 35.5% identity in 1185 aa overlap
NP_562633.1	similar to pir:A72295 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (317 aa); 35.5% identity in 273 aa overlap
NP_562634.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
NP_562635.1	carries the fatty acid chain in fatty acid biosynthesis
NP_562636.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
NP_562637.1	similar to sp|O65984|PLSX_CLOTS FATTY ACID/PHOSPHOLIPID SYNTHESIS PROTEIN PLSX from Thermoanaerobacterium thermosaccharolyticum (333 aa); 42.9% identity in 112 aa overlap. Probably truncated by frameshift mutation
NP_562638.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
NP_562639.1	similar to prf:2220209C   ORF X from Clostridium acetobutylicum (158 aa); 39.6% identity in 154 aa overlap
NP_562640.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
NP_562641.1	in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta
NP_562642.2	similar to pir:B69875 conserved hypothetical protein ylbM from Bacillus subtilis (415 aa); 37.7% identity in 382 aa overlap
NP_562643.1	similar to pir:G69874 hypothetical protein ylbJ from Bacillus subtilis (408 aa); 24.7% identity in 320 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_562644.1	similar to pir:T44704 hypothetical protein MLCB1243.13 from Mycobacterium leprae (245 aa); 28% identity in 168 aa overlap
NP_562645.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
NP_562646.1	similar to gpu:AP001516_19 BH2590 gene product from Bacillus halodurans (189 aa); 35.3% identity in 184 aa overlap
NP_562647.1	catalyzes branch migration in Holliday junction intermediates
NP_562648.1	similar to pir:E69879 conserved hypothetical protein yloV from Bacillus subtilis (553 aa); 44.3% identity in 548 aa overlap
NP_562649.1	similar to pir:D69879 alkaline-shock protein homolog yloU from Bacillus subtilis (120 aa); 41.3% identity in 109 aa overlap
NP_562650.1	similar to sp:R28A_STRCO 50S RIBOSOMAL PROTEIN L28- from Streptomyces coelicolor A3(2) (63 aa); 58.6% identity in 58 aa overlap
NP_562651.1	similar to pir:C69879 hypothetical protein yloS from Bacillus subtilis (214 aa); 34.6% identity in 205 aa overlap
NP_562652.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
NP_562653.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
NP_562654.1	similar to pir:T35491 probable serine/threonine-specific protein kinase pkaF from Streptomyces coelicolor (667 aa); 29.8% identity in 580 aa overlap. 1  transmembrane region was found by PSORT
NP_562655.1	similar to gpu:AP001515_239 BH2505 gene product from Bacillus halodurans (249 aa); 40.6% identity in 229 aa overlap
NP_562656.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
NP_562657.1	similar to gpu:AP001515_241 BH2507 gene product from Bacillus halodurans (450 aa); 39.8% identity in 437 aa overlap
NP_562658.1	similar to pir:H72244 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (230 aa); 50.7% identity in 221 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562659.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
NP_562660.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
NP_562661.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
NP_562662.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
NP_562663.1	Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NP_562664.1	Essential for recycling GMP and indirectly, cGMP
NP_562665.1	similar to gpu:AP001515_247 BH2513 gene product from Bacillus halodurans (87 aa); 88.8% identity in 80 aa overlap
NP_562666.1	similar to gpu:AP001515_248 BH2514 gene product from Bacillus halodurans (294 aa); 38.4% identity in 294 aa overlap
NP_562667.1	similar to pir:B70219 conserved hypothetical protein BBB22 from Borrelia burgdorferi (451 aa); 49.1% identity in 436 aa overlap. 12  transmembrane regions were found by PSORT.
NP_562668.1	similar to gpu:AP001512_211 L-asparaginase from Bacillus halodurans (322 aa); 48.2% identity in 141 aa overlap
NP_562669.1	similar to gpu:AP001512_232 stage IV sporulation protein A (spore cortex formation and coat assembly) from Bacillus halodurans (492 aa); 48.8% identity in 490 aa overlap
NP_562670.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
NP_562671.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
NP_562672.1	similar to gp:D90904_134 hypothetical protein from Synechocystis sp. (451 aa); 37% identity in 440 aa overlap
NP_562673.1	similar to gpu:AP001517_278 two-component sensor histidine kinase involved in phosphate regulation from Bacillus halodurans (589 aa); 33.8% identity in 547 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562674.1	similar to prf:2022232K sigG downstream ORF W from Clostridium acetobutylicum (147 aa); 45.1% identity in 133 aa overlap
NP_562675.1	similar to sp:YORV_CLOAB HYPOTHETICAL 15.2 KDA PROTEIN IN SIGG 3'REGION (ORF V) from Clostridium acetobutylicum (129 aa); 75.7% identity in 111 aa overlap
NP_562676.1	similar to sp:YORU_CLOAB HYPOTHETICAL 9.6 KDA PROTEIN IN SIGG 3'REGION (ORF U) from Clostridium acetobutylicum (87 aa); 54.9% identity in 71 aa overlap
NP_562677.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin
NP_562678.1	sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation
NP_562679.1	similar to sp:SP2G_CLOAB PROBABLE SPORULATION SIGMA-E FACTOR PROCESSING PEPTIDASE (EC 3.4.23.-) from Clostridium acetobutylicum (266 aa); 28.4% identity in 268 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_562680.1	no significant homology 1  transmembrane region was found by PSORT
NP_562681.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
NP_562682.1	similar to gp:AF218835_4  FtsA ortholog from Clostridium perfringens (109 aa); 96.3% identity in 109 aa overlap
NP_562683.1	similar to gp:AF218835_3 PilT from Clostridium perfringens (350 aa); 94.9% identity in 350 aa overlap
NP_562684.1	sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment
NP_562685.1	similar to gp:AF218835_1  penicillin-binding protein from Clostridium perfringens (212 aa); 98.1% identity in 212 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562686.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
NP_562687.1	similar to pir:H69979 proteinase homolog yrrO from Bacillus subtilis (422 aa); 45.8% identity in 404 aa overlap
NP_562688.1	similar to pir:F69979 caffeoyl-CoA O-methyltransferase homolog yrrM from Bacillus subtilis (217 aa); 39.7% identity in 209 aa overlap
NP_562689.1	similar to pir:A70368 conserved hypothetical protein aq_775 from Aquifex aeolicus (326 aa); 40.7% identity in 295 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562690.1	similar to sp:TYPA_HELPY GTP-BINDING PROTEIN TYPA/BIPA HOMOLOG from Helicobacter pylori (strain 26695) (599 aa); 58.4% identity in 596 aa overlap
NP_562691.1	similar to gpu:AP001515_132 BH2398 gene product from Bacillus halodurans (555 aa); 54.7% identity in 554 aa overlap. 1  transmembrane region was found by PSORT
NP_562692.1	similar to gp:AF095597_1 ferric uptake regulator homolog from Staphylococcus aureus (149 aa); 45.3% identity in 128 aa overlap; FurR family
NP_562693.1	similar to gpu:AP001511_159 BH1270 gene product from Bacillus halodurans (93 aa); 46.1% identity in 76 aa overlap
NP_562694.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
NP_562695.1	similar to gpu:AP001511_157 BH1268 gene product from Bacillus halodurans (90 aa); 52.5% identity in 80 aa overlap. S.D. unclear
NP_562696.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_562697.1	partially similar to gpu:AP001511_155 BH1266 gene product from Bacillus halodurans (358 aa); 24.7% identity in 186 aa overlap.  N-terminal signal sequence and 10 transmembrane regions were found by PSORT.
NP_562698.1	partially similar to pir:H69208 hypothetical protein MTH815 from Methanobacterium thermoautotrophicum (strain Delta H) (99 aa); 32.3% identity in 62 aa overlap
NP_562699.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
NP_562700.1	similar to pir:A69273 nifU protein (nifU-1/nifU-2) from Archaeoglobus fulgidus (153 aa); 60.7% identity in 122 aa overlap
NP_562701.1	similar to prf:2421289A   Cys desulfurase from Ruminococcus flavefaciens (396 aa); 55.4% identity in 392 aa overlap
NP_562702.1	similar to gpu:AP001511_148 BH1259 gene product from Bacillus halodurans (139 aa); 45.4% identity in 108 aa overlap
NP_562703.1	similar to pir:D69981 conserved hypothetical protein yrvN from Bacillus subtilis (421 aa); 45.1% identity in 415 aa overlap
NP_562704.1	similar to gp:AB017192_14 hypothetical 34.4-kDa protein from Clostridium perfringens (299 aa); 99% identity in 299 aa overlap
NP_562705.1	similar to gp:AB017192_13 hypothetical 15.6-kDa protein from Clostridium perfringens (142 aa); 97.9% identity in 142 aa overlap
NP_562706.1	similar to sp:MOAA_CLOPE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A from Clostridium perfringens (323 aa); 91.6% identity in 323 aa overlap
NP_562707.1	similar to gp:AB017192_11 molybdopterin biosynthesis protein from Clostridium perfringens (337 aa); 90.2% identity in 337 aa overlap
NP_562708.1	similar to gp:AB017192_10 molybdopterin-guanine dinucleotide biosynthesis protein A from Clostridium perfringens (198 aa); 92.4% identity in 198 aa overlap
NP_562709.1	similar to gp:AB017192_9 molybdenum cofactor biosynthesis protein from Clostridium perfringens (406 aa); 96.6% identity in 406 aa overlap
NP_562710.1	similar to gp:AB017192_8 molybdopterin-guanine dinucleotide biosynthesis protein B from Clostridium perfringens (160 aa); 97.5% identity in 160 aa overlap
NP_562711.1	similar to gp:AB017192_7 nitrate reductase NADH oxydase subunit from Clostridium perfringens (407 aa); 90.7% identity in 407 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562712.1	similar to gp:AB017192_6 nitrate reductase electron transfer subunit from Clostridium perfringens (137 aa); 99.3% identity in 137 aa overlap
NP_562713.1	similar to gp:AB017192_5 nitrate reductase catalytic subunit from Clostridium perfringen (692 aa); 96.4% identity in 692 aa overlap
NP_562714.1	similar to gp:AB017192_4 Clostridium perfringens nitrate reductase gene cluster, partial and complete cds from Clostridium perfringens (142 aa); 95.1% identity in 142 aa overlap. 3  transmembrane regions were found by PSORT.
NP_562715.1	similar to gp:AB017192_3 Clostridium perfringens nitrate reductase gene cluster, partial and complete cds from Clostridium perfringens (425 aa); 99.8% identity in 425 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562716.1	similar to gp:AB017192_2 electron transfer subunit protein from Clostridium perfringens (326 aa); 99.4% identity in 326 aa overlap. 1  transmembrane region was found by PSORT
NP_562717.1	similar to gp:AB017192_1 D-alanyl-D-alanine carboxypeptidase from Clostridium perfringens (183 aa); 100% identity in 183 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562718.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562719.1	similar to gpu:AP001518_26 BH3195 gene product from Bacillus halodurans (147 aa); 44.3% identity in 115 aa overlap
NP_562720.1	functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer
NP_562721.1	functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB
NP_562722.1	similar to sp:DACF_BACSU PENICILLIN-BINDING PROTEIN DACF PRECURSOR (D-ALANYL-D-ALANINE CARBOXYPEPTIDASE) (EC 3.4.16.4) (DD-PEPTIDASE) (DD-CARBOXYPEPTIDASE) from Bacillus subtilis (389 aa); 45.6% identity in 342 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562723.1	similar to sp:PDP_BACSU PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE (EC 2.4.2.2) (PYNP) from Bacillus subtili (434 aa); 62.7% identity in 432 aa overlap. 2 transmembrane regions were found by PSORT.
NP_562724.1	similar to gpu:AP001512_116 integrase/recombinase from Bacillus halodurans (299 aa); 36.4% identity in 275 aa overlap
NP_562725.1	similar to gpu:AP001512_113 stage II sporulation protein M from Bacillus halodurans (217 aa); 23.8% identity in 172 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562726.1	similar to pir:H72286 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (179 aa); 38.4% identity in 172 aa overlap
NP_562727.1	no significant homology
NP_562728.1	similar to gp:CBE288947_2 Spo0A protein from Clostridium beijerinckii (273 aa); 89.7% identity in 117 aa overlap.Truncated by frame shift mutation. Truncated by frameshift mutation (confirmed by PCR-direct sequencing)
NP_562729.1	similar to pir:S60877 phosphorylation-activated transcription factor Spo0A from Clostridium acetobutylicum (strain NCIMB 8052) (224 aa); 76.6% identity in 137 aa overlap.Truncated by frameshift mutation (confirmed by PCR-direct sequencing). 1  transmembrane region was found by PSORT
NP_562730.1	similar to gp:BSU68235_2 SpoIVB from Bacillus subtilis (426 aa); 47.3% identity in 313 aa overlap. N-terminal signal sequence was found by PSORT
NP_562731.1	similar to sp:RECN_BACSU DNA REPAIR PROTEIN RECN (RECOMBINATION PROTEIN N) from Bacillus subtilis (576 aa); 36.5% identity in 559 aa overlap
NP_562732.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
NP_562733.1	similar to sp:Y909_AQUAE HYPOTHETICAL PROTEIN AQ_909 from Aquifex aeolicus (274 aa); 36.9% identity in 249 aa overlap. 1  transmembrane region was found by PSORT
NP_562734.1	similar to gpu:AP001516_207 hemolysin-like protein from Bacillus halodurans (272 aa); 56.1% identity in 262 aa overlap. 1  transmembrane region was found by PSORT
NP_562735.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
NP_562736.1	similar to gpu:AP001516_210 geranyltranstransferase (EC 2.5.1.10) from Bacillus halodurans (294 aa); 43% identity in 286 aa overlap
NP_562737.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
NP_562738.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
NP_562739.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
NP_562740.1	Regulates rRNA biosynthesis by transcriptional antitermination
NP_562741.1	similar to sp:YQHY_BACSU HYPOTHETICAL 14.7 KDA PROTEIN IN ACCC-FOLD INTERGENIC REGION from Bacillus subtilis (135 aa); 40.7% identity in 113 aa overlap. Also similar to pir:JC2527 alkaline shock protein from Staphylococcus aureus. 2  transmembrane regions were found by PSORT.
NP_562742.1	similar to sp:S3AH_BACSU STAGE III SPORULATION PROTEIN AH from Bacillus subtilis (218 aa); 22.4% identity in 143 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562743.1	similar to pir:B69712 mutants block sporulation after engulfment spoIIIAG from Bacillus subtilis (229 aa); 28% identity in 157 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562744.1	no significant homology
NP_562745.1	similar to gpu:AP001516_222 mutants block sporulation after engulfment from Bacillus halodurans (397 aa); 26.4% identity in 333 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_562746.1	similar to sp:S3AD_BACSU STAGE III SPORULATION PROTEIN AD from Bacillus subtilis (133 aa); 34% identity in 103 aa overlap. S.D. unclear.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562747.1	similar to sp:S3AC_BACSU STAGE III SPORULATION PROTEIN AC from Bacillus subtilis (68 aa); 49.2% identity in 63 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562748.1	necessary for complete engulfment of forespore
NP_562749.1	similar to sp:S3AA_BACSU STAGE III SPORULATION PROTEIN AA from Bacillus subtilis (307 aa); 40.3% identity in 293 aa overlap
NP_562750.1	no significant homology
NP_562751.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
NP_562752.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562753.1	no significant homology 1  transmembrane region was found by PSORT
NP_562754.1	no significant homology
NP_562755.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562756.1	no significant homology
NP_562757.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562758.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562759.1	similar to pir:D70365 fimbrial assembly protein PilC from Aquifex aeolicus (408 aa); 22.5% identity in 325 aa overlap. 4  transmembrane regions were found by PSORT.
NP_562760.1	similar to pir:B70469 type IV pilus assembly protein TapB from Aquifex aeolicus (566 aa); 42.6% identity in 352 aa overlap
NP_562761.1	no significant homology
NP_562762.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
NP_562763.1	similar to pir:G69877 fibronectin-binding protein homolog yloA from Bacillus subtilis (572 aa); 39.3% identity in 573 aa overlap
NP_562764.1	similar to gpu:AP001513_44 BH1771 gene product from Bacillus halodurans (385 aa); 57.1% identity in 364 aa overlap
NP_562765.1	regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity
NP_562766.1	similar to sp:YLYB_BACSU HYPOTHETICAL 33.7 KDA PROTEIN IN LSP-PYRR INTERGENIC REGION (ORF-X) from Bacillus subtilis (303 aa); 56.8% identity in 296 aa overlap
NP_562767.1	similar to gpu:AP001515_280 cell-division initiation protein (septum placement) from Bacillus halodurans (165 aa); 32.2% identity in 149 aa overlap
NP_562768.1	similar to pir:H69876 cell-division protein homolog ylmH from Bacillus subtilis (257 aa); 29.4% identity in 194 aa overlap
NP_562769.1	partially similar to gpu:AP001515_283 BH2549 gene product from Bacillus halodurans (149 aa); 39.2% identity in 79 aa overlap
NP_562770.1	similar to pir:B72217 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (229 aa); 41.7% identity in 211 aa overlap
NP_562771.1	similar to gp:BLU01958_3 Bacillus licheniformis 5A2 divIB gene, complete cds from Bacillus licheniformis (188 aa); 28.6% identity in 189 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562772.1	similar to gpu:AP001515_294 small basic protein from Bacillus halodurans (117 aa); 46.7% identity in 92 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562773.1	similar to gpu:AP001515_296 BH2562 gene product from Bacillus halodurans (240 aa); 25.5% identity in 165 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_562774.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562775.1	similar to sp:SP5E_BACSU STAGE V SPORULATION PROTEIN E. from Bacillus subtilis (366 aa); 43.2% identity in 352 aa overlap.  N-terminal signal sequence and 8 transmembrane regions were found by PSORT.
NP_562776.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NP_562777.1	similar to sp:MURF_BACSU UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2, 6-DIAMINOPIMELATE-D-ALANYL-D- ALANYL LIGASE (EC 6.3.2.15) (UDP-MURNAC-PENTAPEPTIDE SYNTHETASE) (D-ALANYL-D-ALANINE-ADDING ENZYME) from Bacillus subtilis (457 aa); 38.7% identity in 452 aa overlap
NP_562778.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
NP_562779.1	similar to gpu:AP001516_1 stage V sporulation protein (soprulation specific penicillin-binding protein) (spore cortex) from Bacillus halodurans (644 aa); 33.3% identity in 651 aa overlap. 1  transmembrane region was found by PSORT
NP_562780.1	no significant homology 1  transmembrane region was found by PSORT
NP_562781.1	similar to sp:YLXA_BACSU HYPOTHETICAL 35.3 KDA PROTEIN IN FTSL 5'REGION (ORFB) from Bacillus subtilis (311 aa); 54.1% identity in 307 aa overlap
NP_562782.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
NP_562783.1	similar to prf:2516401CT   polysaccharide deacetylase-like protein from Bacillus cereus (260 aa); 43.8% identity in 258 aa overlap.  N-terminal signal sequence was found by PSORT; nodulation protein nodB
NP_562784.1	similar to sp:SCE4_METEX  SERINE CYCLE ENZYME (ORF4) from Methylobacterium extorquens (208 aa); 30% identity in 200 aa overlap. 2  transmembrane regions were found by PSORT.
NP_562785.1	similar to C-terminal region of gp:AF169324_12 BcbC from Pasteurella multocida (1033 aa); 27% identity in 244 aa overlap
NP_562786.1	similar to gp:TTH401026_3 hypothetical protein from Thermoanaerobacter thermohydrosulfuricus (245 aa); 39.9% identity in 208 aa overlap
NP_562787.1	similar to sp:Y263_METJA HYPOTHETICAL PROTEIN MJ0263 from Methanococcus jannaschii (320 aa); 23.4% identity in 201 aa overlap. ATA start
NP_562788.1	no significant homology
NP_562789.1	similar to gpu:AP001510_281 phosphomannomutase from Bacillus halodurans (578 aa); 51.1% identity in 573 aa overlap
NP_562790.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
NP_562791.1	partially similar to gpu:AP001510_17 BH0842 gene product from Bacillus halodurans (795 aa); 40.8% identity in 762 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562792.1	partially similar to gpu:AE003864_7 hypothetical protein from Xylella fastidiosa (460 aa); 33.6% identity in 438 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562793.1	similar to pir:F69961 glycerophosphodiester phosphodiesterase homolog yqiK from Bacillus subtilis (239 aa); 39.2% identity in 227 aa overlap
NP_562794.1	similar to gpu:AP000600_10 glycolate oxidase from Arabidopsis thaliana (365 aa); 35.9% identity in 295 aa overlap. 2  transmembrane regions were found by PSORT.
NP_562795.1	similar to pir:F69744 hypothetical protein ybbK from Bacillus subtilis (151 aa); 47.9% identity in 146 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562796.1	similar to gpu:AP001516_1 stage V sporulation protein (soprulation specific penicillin-binding protein) (spore cortex) from Bacillus halodurans (644 aa); 37.5% identity in 627 aa overlap.  N-terminal signal sequence was found by PSORT; soprulation specific penicillin-binding protein
NP_562797.1	MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange
NP_562798.1	similar to pir:D69102 collagenase from Methanobacterium thermoautotrophicum (strain Delta H) (807 aa); 37.5% identity in 512 aa overlap; proteinase
NP_562799.1	similar to sp:YHIC_LACLA HYPOTHETICAL 31.3 KDA PROTEIN IN HISIE 3'REGION (ORF13) from Lactococcus lactis subsp. lactis (269 aa); 33% identity in 221 aa overlap
NP_562800.1	no significant homology
NP_562801.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
NP_562802.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
NP_562803.1	similar to pir:F75550 probable transposase from Deinococcus radiodurans (strain R1) (409 aa); 43% identity in 381 aa overlap
NP_562804.1	similar to pir:F75335 probable transposase from Deinococcus radiodurans (strain R1) (140 aa); 52.8% identity in 123 aa overlap
NP_562805.1	similar to gpu:AP001517_234 rRNA methylase from Bacillus halodurans (251 aa); 39% identity in 223 aa overlap
NP_562806.1	similar to prf:2408326B   trkA gene from Thermoanaerobacter ethanolicus (195 aa); 59.3% identity in 189 aa overlap. 1  transmembrane region was found by PSORT
NP_562807.1	similar to pir:G53610 ntpJ protein from Enterococcus hirae (448 aa); 45.3% identity in 437 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_562808.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
NP_562809.1	similar to gpu:AP001517_261 ribosomal protein L35 from Bacillus halodurans (66 aa); 62.5% identity in 64 aa overlap
NP_562810.1	similar to pir:FIBS3F translation initiation factor IF-3 from Bacillus stearothermophilus (172 aa); 46.4% identity in 168 aa overlap
NP_562811.1	similar to sp:YTXC_BACSU HYPOTHETICAL 33.3 KDA PROTEIN IN DNAI-THRS INTERGENIC REGION (ORF-281) from Bacillus subtilis (281 aa); 24.8% identity in 202 aa overlap
NP_562812.1	similar to prf:2509371E grrZ gene from Eubacterium acidaminophilum (220 aa); 42.1% identity in 183 aa overlap
NP_562813.1	similar to pir:T35886 hypothetical protein SC9B10.17 from Streptomyces coelicolor (330 aa); 33.8% identity in 302 aa overlap. 1  transmembrane region was found by PSORT
NP_562814.1	similar to sp:YSA1_YEAST YSA1 PROTEIN from Saccharomyces cerevisiae (231 aa); 34.3% identity in 134 aa overlap
NP_562815.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562816.1	no significant homology
NP_562817.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
NP_562818.1	similar to sp:YQEM_BACSU HYPOTHETICAL 28.3 KDA PROTEIN IN AROD-COMER INTERGENIC REGION from Bacillus subtilis (247 aa); 31% identity in 242 aa overlap
NP_562819.1	similar to sp:SAS2_CLOBI SMALL, ACID-SOLUBLE SPORE PROTEIN BETA (SASP) (ASSP) from Clostridium bifermentans (64 aa); 46.4% identity in 56 aa overlap
NP_562820.1	similar to sp:DHAS_AQUAE ASPARTATE-SEMIALDEHYDE DEHYDROGENASE (EC 1.2.1.11) (ASA DEHYDROGENASE) from Aquifex aeolicus (340 aa); 55.7% identity in 323 aa overlap
NP_562821.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
NP_562822.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
NP_562823.1	similar to prf:1603288B   kinA assocd ORF Y from Bacillus subtilis (393 aa); 44.1% identity in 381 aa overlap.Also similar to many aminotransferases
NP_562824.1	similar to pir:B72252 cob(I)alamin adenosyltransferase from Thermotoga maritima (strain MSB8) (170 aa); 44.5% identity in 173 aa overlap
NP_562825.1	similar to pir:F69866 tetrahydrodipicolinate succinylase homolog ykuQ from Bacillus subtilis (236 aa); 53.7% identity in 231 aa overlap. 1  transmembrane region was found by PSORT
NP_562826.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
NP_562827.1	partially similar to pir:H69882 deacetylase homolog ylxY from Bacillus subtilis (319 aa); 28.5% identity in 200 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562828.1	no significant homology
NP_562829.1	similar to gp:AF051356_3  permease from Streptococcus mutans (364 aa); 27.1% identity in 362 aa overlap.  N-terminal signal sequence and 7  transmembrane regions were found by PSORT.
NP_562830.1	similar to prf:2423292A   psr gene from Enterococcus hirae (293 aa); 30.7% identity in 293 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562831.1	similar to sp:HLY3_BACCE HEMOLYSIN III (HLY-III) from Bacillus cereus (219 aa); 42.9% identity in 203 aa overlap. 6  transmembrane regions were found by PSORT.
NP_562832.1	similar to pir:S74709 hypothetical protein sll1188 from Synechocystis sp. (strain PCC 6803) (164 aa); 43.9% identity in 164 aa overlap
NP_562833.1	similar to gpu:AE004383_5 conserved hypothetical protein from Vibrio cholerae (468 aa); 34.3% identity in 353 aa overlap.  N-terminal signal sequence and 9 transmembrane regions were found by PSORT.
NP_562834.1	similar to gp:CPFOLC_1 folC gene product from Clostridium perfringens (148 aa); 98.6% identity in 145 aa overlap. 1  transmembrane region was found by PSORT
NP_562835.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
NP_562836.1	no significant homology
NP_562837.1	no significant homology 1  transmembrane region was found by PSORT
NP_562838.1	partially similar to pir:C71139 hypothetical protein PH0326 from Pyrococcus horikoshii (1003 aa); 33.3% identity in 120 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562839.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
NP_562840.1	similar to sp:YMXG_BACSU HYPOTHETICAL ZINC PROTEASE YMXG (EC 3.4.99.-) (ORFP) from Bacillus subtilis (409 aa); 29% identity in 365 aa overlap
NP_562841.1	similar to gp:CPHYPC_1 hypC gene product from Clostridium perfringens (110 aa); 100% identity in 106 aa overlap.Also similar to many two-component response regulators
NP_562842.1	similar to prf:1502267A   phoR gene from Bacillus subtilis (579 aa); 38.1% identity in 223 aa overlap. N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562843.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
NP_562844.1	similar to pir:S20452 hypothetical protein X (fragment) from Klebsiella pneumoniae (271 aa); 34.3% identity in 254 aa overlap
NP_562845.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
NP_562846.1	similar to gpu:AP001507_81 BH0081 gene product from Bacillus halodurans (251 aa); 34.3% identity in 245 aa overlap. 5  transmembrane regions were found by PSORT.
NP_562847.1	similar to gpu:AP001507_82 BH0082 gene product from Bacillus halodurans (150 aa); 36.8% identity in 133 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562848.1	similar to pir:G70041 conserved hypothetical protein yvgZ from Bacillus subtilis (101 aa); 40% identity in 90 aa overlap
NP_562849.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
NP_562850.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
NP_562851.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_562852.1	similar to sp:YCBL_ECOLI HYPOTHETICAL 23.8 KDA PROTEIN IN MUKB-ASPC INTERGENIC REGION from Escherichia coli (215 aa); 39.8% identity in 206 aa overlap
NP_562853.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
NP_562854.1	(p)ppGpp synthetase; 726 aa, similar to prf:2404419A   relA gene from Bacillus subtilis (734 aa); 54% identity in 722 aa overlap. 1 transmembrane region was found by PSORT
NP_562855.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
NP_562856.1	partially similar to pir:H69980 single-strand DNA-specific exonuclease homolog yrvE from Bacillus subtilis (786 aa); 27.9% identity in 262 aa overlap. 2 transmembrane regions were found by PSORT.
NP_562857.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
NP_562858.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
NP_562859.1	similar to pir:E72268 astB/chuR-related protein from Thermotoga maritima (strain MSB8) (463 aa); 27.6% identity in 424 aa overlap
NP_562860.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
NP_562861.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
NP_562862.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
NP_562863.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
NP_562864.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
NP_562865.1	similar to pir:T44357 hypothetical protein from Clostridium histolyticum (204 aa); 30.3% identity in 165 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562866.1	similar to gp:AB028630_4 2', 3'-cyclic nucleotide 2'-phosphodiesterase from Clostridium perfringens (865 aa); 65.7% identity in 867 aa overlap.  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_562867.1	similar to gp:AB028630_4 2', 3'-cyclic nucleotide 2'-phosphodiesterase from Clostridium perfringens (865 aa); 99.9% identity in 865 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562868.1	similar to gp:AB028630_3 protein-tyrosine phosphatase from Clostridium perfringens (332 aa); 95.8% identity in 332 aa overlap
NP_562869.1	similar to gp:AB028630_2 bacterial hemoglobin from Clostridium perfringens (144 aa); 100% identity in 144 aa overlap
NP_562870.1	similar to gp:AB028630_1 hypothetical protein from Clostridium perfringens (245 aa); 90.6% identity in 245 aa overlap
NP_562871.1	similar to pir:T44352 hypothetical protein from Clostridium histolyticum (216 aa); 50.7% identity in 213 aa overlap
NP_562872.1	similar to pir:T44350 hypothetical protein from Clostridium histolyticum (466 aa); 51.1% identity in 466 aa overlap. Also similar to pir:E75208 probable valine-pyruvate transaminase (EC 2.6.1.66) PAB2227 from Pyrococcus abyssi (strain Orsay)
NP_562873.1	similar to pir:T44349 hypothetical protein from Clostridium histolyticum (298 aa); 32.4% identity in 296 aa overlap
NP_562874.1	no significant homology
NP_562875.1	similar to pir:T44348 GTP binding protein from Clostridium histolyticum (596 aa); 55.8% identity in 597 aa overlap; GTPase
NP_562876.1	similar to pir:T44347 hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) from Clostridium histolyticum (175 aa); 65.9% identity in 173 aa overlap
NP_562877.1	similar to pir:T44346 hypothetical protein from Clostridium histolyticum (215 aa); 51.5% identity in 198 aa overlap. 1  transmembrane region was found by PSORT
NP_562878.1	similar to gpu:AP001512_289 penicillin-binding proteins 1A/1B from Bacillus halodurans (886 aa); 33.4% identity in 613 aa overlap. 1  transmembrane region was found by PSORT
NP_562879.1	no significant homology
NP_562880.1	similar to gpu:AP001516_143 amino acid carrier protein (sodium/alanine symporter) from Bacillus halodurans (470 aa); 51.3% identity in 464 aa overlap. 9 transmembrane regions were found by PSORT.; sodium/alanine symporter
NP_562881.1	no significant homology
NP_562882.1	no significant homology
NP_562883.1	similar to pir:E72348 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (176 aa); 42.2% identity in 173 aa overlap
NP_562884.1	similar to pir:A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA) homolog from Borrelia burgdorferi (347 aa); 56.7% identity in 344 aa overlap; ATP-binding protein
NP_562885.1	similar to pir:H70179 spermidine/putrescine ABC transporter, permease (potB) homolog from Borrelia burgdorferi (269 aa); 46.1% identity in 204 aa overlap. N-terminal signal sequence and 6  transmembrane regions were found by PSORT.; permease
NP_562886.1	similar to pir:G70179 spermidine/putrescine ABC transporter, permease (potC) homolog from Borrelia burgdorferi (263 aa); 41.2% identity in 245 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_562887.1	similar to sp:POTD_ECOLI SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN PRECURSOR (SPBP) from Escherichia coli (348 aa); 43.1% identity in 306 aa overlap.  N-terminal signal sequence was found by PSORT; binding protein
NP_562888.1	similar to sp:NDK_METTH NUCLEOSIDE DIPHOSPHATE KINASE (EC 2.7.4.6) (NDK) (NDP KINASE) from Methanobacterium thermoautotrophicum (151 aa); 52.9% identity in 140 aa overlap
NP_562889.1	similar to sp:ACYP_BACSU  ACYLPHOSPHATASE (EC 3.6.1.7) (ACYLPHOSPHATE PHOSPHOHYDROLASE) from Bacillus subtilis (91 aa); 36.8% identity in 87 aa overlap
NP_562890.1	no significant homology
NP_562891.1	no significant homology 1  transmembrane region was found by PSORT
NP_562892.1	similar to gpu:AP001512_122 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) from Bacillus halodurans (387 aa); 33.1% identity in 257 aa overlap. N-terminal signal sequence and 1  transmembrane region were found by PSORT; penicilin binding protein 5
NP_562893.1	hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation
NP_562894.1	catalyzes the formation of asparagine from aspartate and ammonia
NP_562895.1	partially similar to pir:B69196 conserved hypothetical protein MTH72 from Methanobacterium thermoautotrophicum (strain Delta H) (403 aa); 24.7% identity in 186 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_562896.1	similar to sp:YWBH_BACSU HYPOTHETICAL 14.3 KDA PROTEIN IN EPR-GALK INTERGENIC REGION from Bacillus subtilis (128 aa); 30.2% identity in 116 aa overlap. N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_562897.1	similar to gpu:AP001518_99 BH3268 gene product from Bacillus halodurans (227 aa); 35.3% identity in 221 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_562898.1	no significant homology
NP_562899.1	similar to gp:AF192329_12 DNA topoisomerase III-like protein from Enterococcus faecalis (693 aa); 30.5% identity in 696 aa overlap
NP_562900.1	similar to gpu:AP001517_130 BH3008 gene product from Bacillus halodurans (382 aa); 44.7% identity in 380 aa overlap
NP_562901.1	similar to pir:A57438 tryptophan-rich sensory protein from Rhodobacter sphaeroides (strain 2.4.1) (158 aa); 38.7% identity in 124 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562902.1	similar to prf:2314195D   adenylate cyclase from Anabaena sp. (1155 aa); 27.8% identity in 227 aa overlap. N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_562903.1	similar to sp:RESE_BACSU SENSOR PROTEIN RESE (EC 2.7.3.-) from Bacillus subtilis (589 aa); 29.4% identity in 228 aa overlap. 8  transmembrane regions were found by PSORT.
NP_562904.1	similar to pir:B69196 conserved hypothetical protein MTH72 from Methanobacterium thermoautotrophicum (strain Delta H) (403 aa); 29.4% identity in 187 aa overlap
NP_562905.1	similar to pir:D83233 hypothetical protein PA3301 from Pseudomonas aeruginosa (strain PAO1) (316 aa); 38.5% identity in 283 aa overlap
NP_562906.1	similar to gp:BYPK1CAP_1 serine/threonine kinase from Bacillus thuringiensis (385 aa); 27.8% identity in 162 aa overlap
NP_562907.1	similar to gp:AB001488_11 ydaJ gene product from Bacillus subtilis (364 aa); 27.1% identity in 314 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562908.1	partially similar to pir:S75975 hypothetical protein from Synechocystis sp. (strain PCC 6803) (847 aa); 34.3% identity in 134 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562909.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
NP_562910.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
NP_562911.1	catalyzes the formation of glutamate from glutamine
NP_562912.1	no significant homology
NP_562913.1	similar to sp:AMP2_BACST AMINOPEPTIDASE II (EC 3.4.11.-) (AP-II) from Bacillus stearothermophilus (413 aa); 54% identity in 411 aa overlap
NP_562914.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562915.1	partially similar to pir:T12792 hypothetical protein yomE from pir:T12792 hypothetical protein yomE - Bacillus subtilis phage SPBc2 (644 aa); 30.4% identity in 168 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562916.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_562917.1	similar to N-terminal of pir:D69376 conserved hypothetical protein AF1012 from Archaeoglobus fulgidus (312 aa); 27.1% identity in 129 aa overlap
NP_562918.1	similar to N-terminal of gp:AF036485_6 hypothetical protein from Plasmid pNZ4000 (200 aa); 20.9% identity in 177 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_562919.1	similar to gp:SPBC1683_6  inosine-uridine preferring nucleoside hydrolase from Schizosaccharomyces pombe (310 aa); 36.3% identity in 303 aa overlap
NP_562920.1	similar to gp:SCC30_9 hypothetical protein SCC30.09c from Streptomyces coelicolor A3(2) (285 aa); 34.1% identity in 258 aa overlap
NP_562921.1	similar to gp:D78182_2 ORF3 gene product from Streptococcus mutans (232 aa); 33.6% identity in 229 aa overlap
NP_562922.1	partially similar to sp:YORS_CLOAB HYPOTHETICAL 14.0 KDA PROTEIN IN SIGA 3'REGION (ORF S) from Clostridium acetobutylicum (118 aa); 25.9% identity in 116 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562923.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium
NP_562924.1	synthesizes RNA primers at the replication forks
NP_562925.1	dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
NP_562926.1	similar to pir:F69987 spore coat protein homolog ytaA from Bacillus subtilis (357 aa); 26.7% identity in 266 aa overlap
NP_562927.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
NP_562928.1	similar to gpu:AP001511_261 BH1372 gene product from Bacillus halodurans (214 aa); 47.6% identity in 210 aa overlap
NP_562929.1	no significant homology 1  transmembrane region was found by PSORT
NP_562930.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
NP_562931.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
NP_562932.1	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis
NP_562933.1	N-terminal region is similar to gpu:AP001511_253 diacylglycerol kinase from Bacillus halodurans (130 aa); 37.6% identity in 109 aa overlap. 6  transmembrane regions were found by PSORT.
NP_562934.1	similar to sp:YQFG_BACSU HYPOTHETICAL 17.8 KDA PROTEIN IN PHOH-DGKA INTERGENIC REGION from Bacillus subtilis (157 aa); 39.2% identity in 143 aa overlap
NP_562935.1	similar to gpu:AP001511_251 BH1362 gene product from Bacillus halodurans (721 aa); 33.2% identity in 669 aa overlap.  N-terminal signal sequence and 7 transmembrane regions were found by PSORT.
NP_562936.1	similar to sp:YQFD_BACSU HYPOTHETICAL 45.7 KDA PROTEIN IN RPSU-PHOH INTEREGENIC REGION from Bacillus subtilis (398 aa); 23.8% identity in 366 aa overlap. Also similar to gp:BMAJ4829_4 spoIV gene product from Bacillus megaterium. 1  transmembrane region was found by PSORT
NP_562937.1	similar to sp:YQFC_BACSU HYPOTHETICAL 10.8 KDA PROTEIN IN RPSU-PHOH INTEREGENIC REGION from Bacillus subtili (93 aa); 30.1% identity in 93 aa overlap
NP_562938.1	similar to pir:T43743 conserved hypothetical protein orf17 from Listeria monocytogenes (151 aa); 45.2% identity in 146 aa overlap
NP_562939.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
NP_562940.1	similar to pir:F83564 probable HIT family protein PA0656 from Pseudomonas aeruginosa (strain PAO1) (112 aa); 58% identity in 112 aa overlap
NP_562941.1	similar to gp:AF036764_3 unknown from Clostridium acetobutylicum (386 aa); 63.2% identity in 386 aa overlap
NP_562942.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
NP_562943.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
NP_562944.1	similar to gpu:AP001516_76 transcriptional regulator (GntR family) from Bacillus halodurans (123 aa); 52.5% identity in 118 aa overlap; GntR family
NP_562945.1	partially similar to gp:PFMAL3P2_16 PFC0235w gene product from Plasmodium falciparum (1213 aa); 25.2% identity in 313 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562946.1	similar to gpu:AP001516_78 BH2649 gene product from Bacillus halodurans (274 aa); 23.3% identity in 202 aa overlap. 6  transmembrane regions were found by PSORT.
NP_562947.1	similar to gpu:AP001516_77 ABC transporter (ATP-binding protein) from Bacillus halodurans (229 aa); 41.4% identity in 227 aa overlap; ATP-binding protein
NP_562948.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
NP_562949.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
NP_562950.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
NP_562951.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NP_562952.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
NP_562953.1	no significant homology
NP_562954.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
NP_562955.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_562956.1	similar to gpu:AP001513_176 stage II sporulation protein P from Bacillus halodurans (377 aa); 31.9% identity in 204 aa overlap.  N-terminal signal sequence was found by PSORT
NP_562957.1	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
NP_562958.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
NP_562959.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
NP_562960.1	partially similar to gpu:AP001511_224 late competence operon required for DNA binding and uptake from Bacillus halodurans (773 aa); 29.9% identity in 177 aa overlap.  N-terminal signal sequence and 10  transmembrane regions were found by PSORT.
NP_562961.1	similar to gpu:AP001512_157 sporulation protein from Bacillus halodurans (116 aa); 38.9% identity in 113 aa overlap.  N-terminal signal sequence and 2 transmembrane regions were found by PSORT.
NP_562962.1	similar to sp:SP54_BACSU STAGE V SPORULATION PROTEIN AD from Bacillus subtilis (338 aa); 39.2% identity in 332 aa overlap
NP_562963.1	similar to gpu:AP001512_155 stage V sporulation protein AC from Bacillus halodurans (159 aa); 49.7% identity in 145 aa overlap. 3  transmembrane regions were found by PSORT.
NP_562964.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.
NP_562965.1	binds to sigma F preventing its association with RNA polymerase during sporulation
NP_562966.1	similar to sp:SP21_BACME ANTI-SIGMA F FACTOR ANTAGONIST (STAGE II SPORULATION PROTEIN AA) from Bacillus megaterium (116 aa); 48.6% identity in 107 aa overlap; stage II sporulation protein AA
NP_562967.1	similar to pir:H82392 ATP-dependent LA-related proteinase VCA0975 from Vibrio cholerae (group O1 strain N16961) (786 aa); 31.5% identity in 715 aa overlap
NP_562968.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
NP_562969.1	no significant homology
NP_562970.1	similar to pir:H69877 calcium-transporting ATPase homolog yloB from Bacillus subtilis (890 aa); 48.7% identity in 649 aa overlap. 9  transmembrane regions were found by PSORT.
NP_562971.1	catalyzes the hydrolysis of pyrophosphate to phosphate
NP_562972.1	similar to pir:H81344 hypothetical protein Cj0733 from Campylobacter jejuni (strain NCTC 11168) (212 aa); 28.2% identity in 177 aa overlap
NP_562973.1	no significant homology
NP_562974.1	similar to gp:AB010789_2 glutamate decarboxylase from Lactococcus lactis (466 aa); 70.5% identity in 464 aa overlap
NP_562975.1	similar to sp:YHIM_ECOLI HYPOTHETICAL 39.2 KDA PROTEIN IN RHSB-PIT INTERGENIC REGION from Escherichia coli (364 aa); 49.2% identity in 356 aa overlap. N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_562976.1	similar to gp:AF309077_1 glutamate:gamma-aminobutyrate antiporter from Listeria monocytogenes (501 aa); 68.8% identity in 464 aa overlap. N-terminal signal sequence and 11  transmembrane regions were found by PSORT.
NP_562977.1	similar to gp:CPA17727_2 pyruvate ferredoxin oxidoreductase from Clostridium pasteurianum (1175 aa); 73.6% identity in 1167 aa overlap
NP_562978.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
NP_562979.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
NP_562980.1	similar to pir:JN0082 small acid-soluble spore protein C1 from Clostridium perfringens (59 aa); 100% identity in 59 aa overlap
NP_562981.1	similar to pir:H69980 single-strand DNA-specific exonuclease homolog yrvE from Bacillus subtilis (786 aa); 34.5% identity in 585 aa overlap. 1  transmembrane region was found by PSORT
NP_562982.1	similar to sp:Y219_RICPR HYPOTHETICAL ZINC PROTEASE RP219 (EC 3.4.99.-) from Rickettsia prowazekii (412 aa); 24.5% identity in 388 aa overlap
NP_562983.1	similar to pir:C81363 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein Cj0899c from Campylobacter jejuni (strain NCTC 11168) (187 aa); 31.7% identity in 183 aa overlap. 1  transmembrane region was found by PSORT
NP_562984.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_562985.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
NP_562986.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
NP_562987.1	similar to prf:2302324B   rfbB gene from Salmonella enterica (459 aa); 32% identity in 406 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562988.1	similar to gp:BCE243712_10  UV-endonuclease from Bacillus cereus (317 aa); 31.4% identity in 293 aa overlap
NP_562989.1	similar to pir:H69987 hypothetical protein ytaF from Bacillus subtilis (159 aa); 34% identity in 144 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_562990.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
NP_562991.1	similar to pir:B64829 membrane protein b0899 from Escherichia coli (540 aa); 56.6% identity in 486 aa overlap
NP_562992.1	similar to gp:AAC252161_6  alpha-glucosidase from Alicyclobacillus acidocaldarius (728 aa); 43.5% identity in 591 aa overlap
NP_562993.1	similar to gpu:AP001509_224 transcriptional regulator from Bacillus halodurans (302 aa); 35.5% identity in 293 aa overlap. 1  transmembrane region was found by PSORT
NP_562994.1	similar to gpu:AP001509_234 BH0796 gene product from Bacillus halodurans (500 aa); 45.8% identity in 474 aa overlap
NP_562995.1	similar to pir:E82970 hypothetical protein PA5409 from Pseudomonas aeruginosa (strain PAO1) (186 aa); 28.3% identity in 106 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_562996.1	similar to gpu:AP001509_229 alpha-mannosidase from Bacillus halodurans (1039 aa); 37.2% identity in 1038 aa overlap
NP_562997.1	similar to gpu:AP001509_233 sugar transport system (permease) (binding protein dependent transporter) from Bacillus halodurans (322 aa); 54.1% identity in 316 aa overlap. 6  transmembrane regions were found by PSORT.; permease
NP_562998.1	similar to gpu:AP001509_232 sugar transport system (permease) (binding protein dependent transporter) from Bacillus halodurans (312 aa); 55.6% identity in 304 aa overlap. 4  transmembrane regions were found by PSORT.; permease
NP_562999.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
NP_563000.1	similar to pir:S77084 ABC-type transport protein sll0739 from Synechocystis sp. (strain PCC 6803) (615 aa); 35.9% identity in 170 aa overlap.  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.; permease
NP_563001.1	similar to pir:A70040 molybdate-binding protein homolog yvg from Bacillus subtilis (260 aa); 44.3% identity in 246 aa overlap.  N-terminal signal sequence was found by PSORT; binding protein
NP_563002.1	partially similar to sp:CNX1_ARATH MOLYBDOPTERIN BIOSYNTHESIS CNX1 PROTEIN (MOLYBDENUM COFACTOR BIOSYNTHESIS ENZYME CNX1) from Arabidopsis thaliana (670 aa); 49.4% identity in 158 aa overlap
NP_563003.1	similar to gpu:AP001509_231 two-component sensor response regulator from Bacillus halodurans (508 aa); 29.2% identity in 507 aa overlap
NP_563004.1	similar to gpu:AP001509_230 two-component sensor histidine kinase from Bacillus halodurans (587 aa); 27.2% identity in 569 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563005.1	similar to gpu:AP001508_211 BH0488 gene product from Bacillus halodurans (216 aa); 22.7% identity in 185 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.
NP_563006.1	similar to gp:AF106850_1 FmhB from Staphylococcus aureus (421 aa); 30.3% identity in 439 aa overlap
NP_563007.1	similar to gpu:AP001509_13 BH0575 gene product from Bacillus halodurans (102 aa); 55.4% identity in 101 aa overlap
NP_563008.1	similar to sp:YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YXEO from Bacillus subtilis (249 aa); 61.4% identity in 241 aa overlap; ATP-binding protein
NP_563009.1	similar to gp:D90907_46 glutamine-binding periplasmic protein from Synechocystis sp. (strain PCC 6803) (530 aa); 34.7% identity in 461 aa overlap. 3 transmembrane regions were found by PSORT.; permease
NP_563010.1	partially similar to prf:2409329F hydrogenase from Methanosarcina barkeri (122 aa); 40.7% identity in 54 aa overlap
NP_563011.1	similar to pir:A75034 hypothetical protein PAB1546 from Pyrococcus abyssi (strain Orsay) (156 aa); 26.9% identity in 119 aa overlap
NP_563012.1	similar to gp:AB028738_8 hypothetical 25.9-kD protein from Clostridium perfringens (215 aa); 100% identity in 186 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563013.1	similar to gp:AB028738_6 hypothetical 48.7-kD protein from Clostridium perfringens (418 aa); 96.9% identity in 418 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563014.1	similar to gp:AB028738_5 Sensor histidine kinase VirJ from Clostridium perfringens (471 aa); 84.6% identity in 469 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_563015.1	similar to gp:AB028738_4 Response regulator protein VirI from Clostridium perfringens (232 aa); 100% identity in 232 aa overlap
NP_563016.1	similar to gp:AB028738_3 hypothetical 15.2-kD protein from Clostridium perfringens (131 aa); 89.3% identity in 131 aa overlap
NP_563017.1	similar to gp:AB028738_2 hypothetical 11.0-kD protein from Clostridium perfringens (96 aa); 100% identity in 96 aa overlap
NP_563018.1	similar to gp:AB028738_1 probable ATP-dependent RNA helicase from Clostridium perfringens (585 aa); 98.1% identity in 585 aa overlap
NP_563019.1	partially similar to gp:AE001768_5 ribosomal protein L11 methyltransferase,  from Thermotoga maritima (264 aa); 34.5% identity in 177 aa overlap. 1 transmembrane region was found by PSORT
NP_563020.1	similar to pir:F72239 hypothetical protein from Thermotoga maritima (strain MSB8) (211 aa); 20.8% identity in 154 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.
NP_563021.1	similar to pir:E72239 hypothetical protein TM1554 from Thermotoga maritima (strain MSB8) (106 aa); 40% identity in 50 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563022.1	similar to sp:APBE_TREPA THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE PRECURSOR from Treponema pallidum (362 aa); 33.6% identity in 286 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563023.1	partially similar to pir:T28317 ORF MSV156 hypothetical protein from Melanoplus sanguinipes entomopoxvirus (1127 aa); 21% identity in 675 aa overlap
NP_563024.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563025.1	similar to pir:D69439 conserved hypothetical protein AF1517 from Archaeoglobus fulgidus (162 aa); 27.8% identity in 97 aa overlap
NP_563026.1	no significant homology 5  transmembrane regions were found by PSORT.
NP_563027.1	partially similar to pir:C75537 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (406 aa); 22.6% identity in 137 aa overlap. ATT start. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_563028.1	partially similar to prf:2204349A   ORF 1 from Clostridium perfringens (242 aa); 41.4% identity in 232 aa overlap. 2  transmembrane regions were found by PSORT.
NP_563029.1	partially similar to prf:2204349A   ORF 1 from Clostridium perfringens (242 aa); 40.6% identity in 229 aa overlap. ATA start. 1  transmembrane region was found by PSORT
NP_563030.1	similar to gpu:AB023045_18 RNA methyltransferase-like protein from Arabidopsis thaliana (554 aa); 36.2% identity in 447 aa overlap
NP_563031.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_563032.1	similar to gp:EAC245960_3 elongation factor SelB from Eubacterium acidaminophilum (626 aa); 43.8% identity in 635 aa overlap. 1  transmembrane region was found by PSORT
NP_563033.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
NP_563034.1	similar to gp:EAC245960_1 selenophosphate synthetase from Eubacterium acidaminophilum (347 aa); 57.4% identity in 324 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563035.1	no significant homology 1  transmembrane region was found by PSORT
NP_563036.1	similar to sp:CME1_BACSU COME OPERON PROTEIN 1 from Bacillus subtili (205 aa); 39.9% identity in 148 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563037.1	similar to gp:CPDACF_1 dacF gene product from Clostridium perfringens (96 aa); 94.8% identity in 96 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563038.1	similar to sp:YJBO_BACSU HYPOTHETICAL 31.5 KDA PROTEIN IN MECA-TENA INTERGENIC REGION from Bacillus subtilis (283 aa); 39.8% identity in 269 aa overlap
NP_563039.1	similar to pir:S75661 membrane-bound protein lytR from Synechocystis sp. (strain PCC 6803) (463 aa); 31% identity in 358 aa overlap. 1  transmembrane region was found by PSORT; membrane-bound protein
NP_563040.1	similar to gpu:AP001511_216 BH1327 gene product from Bacillus halodurans (187 aa); 44.1% identity in 179 aa overlap
NP_563041.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
NP_563042.1	similar to sp:YQEI_BACSU HYPOTHETICAL 10.8 KDA PROTEIN IN AROD-COMER INTERGENIC REGION from Bacillus subtilis (96 aa); 46.9% identity in 96 aa overlap
NP_563043.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
NP_563044.1	involved in the peptidyltransferase reaction during translation
NP_563045.1	no significant homology 1  transmembrane region was found by PSORT
NP_563046.1	similar to pir:H81212 50S ribosomal protein L21 NMB0325 from Neisseria meningitidis (group B strain MD58, group A strain Z2491) (102 aa); 48.5% identity in 101 aa overlap
NP_563047.1	similar to sp:RNG_HAEIN RIBONUCLEASE G (EC 3.1.4.-) (RNASE G) (CYTOPLASMIC AXIAL FILAMENT PROTEIN) from Haemophilus influenzae (strain Rd KW20) (491 aa); 36.5% identity in 394 aa overlap
NP_563048.1	partially similar to gp:SCC88_11 hypothetical protein SCC88.11c from Streptomyces coelicolor A3(2) (258 aa); 28.3% identity in 159 aa overlap
NP_563049.1	similar to pir:H72336 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (599 aa); 41.3% identity in 605 aa overlap
NP_563050.1	similar to N-terminal of pir:A69209 conserved hypothetical protein MTH816 from Methanobacterium thermoautotrophicum (strain Delta H) (341 aa); 31.7% identity in 139 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_563051.1	no significant homology 1  transmembrane region was found by PSORT
NP_563052.1	similar to gp:SCY14206_5 sfr gene product from Streptomyces coelicolor A3(2) (372 aa); 29.3% identity in 355 aa overlap.  N-terminal signal sequence and 9 transmembrane regions were found by PSORT.
NP_563053.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
NP_563054.1	similar to gpu:AP001517_149 septum site-determining protein from Bacillus halodurans (264 aa); 55.4% identity in 240 aa overlap
NP_563055.1	blocks the formation of polar Z-ring septums
NP_563056.1	partially similar to gp:AF147448_1 penicillin-binding protein 2 from Pseudomonas aeruginosa (646 aa); 29.4% identity in 333 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563057.1	no significant homology  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_563058.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
NP_563059.1	functions in MreBCD complex in some organisms
NP_563060.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
NP_563061.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
NP_563062.1	no significant homology 1  transmembrane region was found by PSORT
NP_563063.1	similar to gpu:AP001515_17 BH2283 gene product from Bacillus haloduran (290 aa); 29.3% identity in 249 aa overlap
NP_563064.1	similar to gpu:AE004299_7 aminoacyl-histidine dipeptidase from Vibrio cholerae (534 aa); 39.5% identity in 476 aa overlap
NP_563065.1	similar to gpu:AP001517_285 pyruvate kinase (EC 2.7.1.40) from Bacillus halodurans (584 aa); 50% identity in 474 aa overlap
NP_563066.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
NP_563067.1	similar to pir:F70041 probable mercuric ion-binding protein yvgY from Bacillus subtilis (69 aa); 27.4% identity in 62 aa overlap
NP_563068.1	similar to sp:YAAA_HAEIN HYPOTHETICAL PROTEIN HI0984 from Haemophilus influenzae (strain Rd KW20) (272 aa); 43.5% identity in 255 aa overlap
NP_563069.1	similar to gpu:AP001516_139 inosine-5'-monophosphate dehydrogenase from Bacillus halodurans (144 aa); 64% identity in 136 aa overlap
NP_563070.1	partially similar to sp:DPO3_THEMA DNA POLYMERASE III, ALPHA CHAIN POLC-TYPE (EC 2.7.7.7) (POLIII) from Thermotoga maritima (strain MSB8 (1367 aa); 33.1% identity in 151 aa overlap
NP_563071.1	similar to pir:A64696 hypothetical protein HP0426/HP1409 from Helicobacter pylori (strain 26695) (578 aa); 26% identity in 557 aa overlap. 1  transmembrane region was found by PSORT
NP_563072.1	partially similar to sp:MUTS_AQUPY DNA MISMATCH REPAIR PROTEIN MUTS from Aquifex pyrophilus (855 aa); 28.3% identity in 258 aa overlap. 3  transmembrane regions were found by PSORT.
NP_563073.1	similar to gpu:AP001510_19 PTS system, glucose-specific enzyme II, A component from Bacillus halodurans (675 aa); 57.3% identity in 504 aa overlap. N-terminal signal sequence and 7  transmembrane regions were found by PSORT.; glucose-specific enzyme IIA component
NP_563074.1	similar to pir:A69756 adhesion protein homolog ycdH from Bacillus subtilis (319 aa); 33% identity in 315 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563075.1	similar to pir:A64465 hypothetical protein MJ1322 from Methanococcus jannaschii (1005 aa); 28.1% identity in 431 aa overlap. 2  transmembrane regions were found by PSORT.
NP_563076.1	similar to pir:A69819 probable phosphoesterase (EC 3.1.-.-) yhaO from Bacillus subtilis (408 aa); 28% identity in 296 aa overlap. 1  transmembrane region was found by PSORT
NP_563077.1	similar to pir:A54537 small acid-soluble spore ssp1 from Clostridium perfringens (60 aa); 100% identity in 60 aa overlap
NP_563078.1	similar to gpu:AE004311_7 2`,3`-cyclic-nucleotide 2`-phosphodiesterase,  from Vibrio cholerae (634 aa); 52.5% identity in 598 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563079.1	similar to pir:H72290 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (215 aa); 31.2% identity in 205 aa overlap
NP_563080.1	similar to sp:YDIB_BACSU HYPOTHETICAL 17.9 KDA PROTEIN IN PHOB-GROES INTERGENIC REGION from Bacillus subtilis (158 aa); 46.5% identity in 142 aa overlap
NP_563081.1	similar to pir:D69786 glycoprotein endopeptidase homolog ydi from Bacillus subtilis (229 aa); 33.6% identity in 232 aa overlap
NP_563082.1	similar to pir:E69786 ribosomal-protein-alanine N-acetyltransfer homolog ydiD from Bacillus subtilis (151 aa); 44.9% identity in 136 aa overlap
NP_563083.1	similar to sp:YPAA_BACSU HYPOTHETICAL 20.5 KDA PROTEIN IN SERA-FER INTERGENIC REGION from Bacillus subtilis (190 aa); 35.7% identity in 171 aa overlap. N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_563084.1	similar to gpu:AP001508_254 BH0531 gene product from Bacillus halodurans (728 aa); 53.3% identity in 709 aa overlap
NP_563085.1	partially similar to gpu:AE003921_10 hypothetical protein from Xylella fastidiosa (529 aa); 29.5% identity in 207 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_563086.1	catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA
NP_563087.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
NP_563088.1	similar to gpu:AP001519_123 ribosomal protein S30AE family from Bacillus haloduran (187 aa); 48.9% identity in 174 aa overlap
NP_563089.1	similar to gp:AE001803_4 comFC protein,  from Thermotoga maritima (202 aa); 27.7% identity in 184 aa overlap; late competence protein
NP_563090.1	no significant homology
NP_563091.1	similar to gp:SCC57A_8  deoxyribonuclease from Streptomyces coelicolor A3(2) (753 aa); 37.7% identity in 732 aa overlap
NP_563092.1	similar to gpu:AP001508_144 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Bacillus halodurans (397 aa); 40.7% identity in 376 aa overlap. 1  transmembrane region was found by PSORT
NP_563093.2	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
NP_563094.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563095.1	similar to sp:YYAC_BACSU HYPOTHETICAL 22.5 KDA PROTEIN IN RPSF-SPO0J INTERGENIC REGION from Bacillus subtilis (205 aa); 38.9% identity in 149 aa overlap
NP_563096.1	similar to sp:MBL_BACCE MREB-LIKE PROTEIN (MBL PROTEIN) from Bacillus cereus (333 aa); 52.9% identity in 323 aa overlap. 1  transmembrane region was found by PSORT; MreB-like protein
NP_563097.1	similar to sp:SP3D_BACSU STAGE III SPORULATION PROTEIN D (14 KDA TRANSCRIPTION FACTOR) from Bacillus subtilis (93 aa); 61.3% identity in 80 aa overlap
NP_563098.1	similar to C-terminal region of gpu:AF157831_2 43 kDa antigen from Bartonella bacilliformis (401 aa); 31.2% identity in 157 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563099.1	similar to pir:S27530 sporulation protein from Clostridium acetobutylicum (362 aa); 47.4% identity in 272 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563100.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
NP_563101.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563102.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex
NP_563103.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
NP_563104.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
NP_563105.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
NP_563106.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
NP_563107.1	produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel
NP_563108.1	produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0
NP_563109.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
NP_563110.1	no significant homology  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_563111.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis
NP_563112.1	similar to pir:A72304 UDP-N-acetylglucosamine 2-epimerase from Thermotoga maritima (strain MSB8) (378 aa); 58.5% identity in 378 aa overlap
NP_563113.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
NP_563114.1	catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity
NP_563115.1	no significant homology 1  transmembrane region was found by PSORT
NP_563116.1	similar to pir:D71154 hypothetical protein PH0435 from Pyrococcus horikoshii (340 aa); 49.4% identity in 330 aa overlap
NP_563117.1	no significant homology  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563118.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
NP_563119.1	N-terminal region is similar to pir:A72239 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (296 aa); 39.9% identity in 293 aa overlap. ATC start. 4  transmembrane regions were found by PSORT.
NP_563120.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
NP_563121.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
NP_563122.1	similar to sp:YPFP_BACSU HYPOTHETICAL 43.6 KDA PROTEIN IN CPSD-METB INTERGENIC REGION from Bacillus subtilis (382 aa); 29.1% identity in 333 aa overlap
NP_563123.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
NP_563124.1	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
NP_563125.1	similar to pir:C70059 hypothetical protein ywiB from Bacillus subtilis (142 aa); 31.9% identity in 113 aa overlap
NP_563126.1	similar to pir:G81259 hypothetical protein Cj1633 from Campylobacter jejuni (strain NCTC 11168) (327 aa); 41.5% identity in 299 aa overlap
NP_563127.1	similar to sp:SP2R_BACSU STAGE II SPORULATION PROTEIN R from Bacillus subtilis (224 aa); 37.7% identity in 167 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563128.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
NP_563129.1	catalyze the formation of cyanophycin which may act to store excess nitrogen
NP_563130.1	similar to sp:CPHB_SYNY8 CYANOPHYCINASE (EC 3.-.-.-) from Synechocystis PCC6308 (272 aa); 40.2% identity in 264 aa overlap
NP_563131.1	no significant homology
NP_563132.1	similar to sp:VEG_BACSU VEG PROTEIN from Bacillus subtilis (86 aa); 45.2% identity in 73 aa overlap
NP_563133.1	similar to sp:YABG_BACSU HYPOTHETICAL 33.3 KDA PROTEIN IN KSGA-VEG INTERGENIC REGION from Bacillus subtilis (290 aa); 41.3% identity in 288 aa overlap
NP_563134.1	similar to pir:F69987 spore coat protein homolog ytaA from Bacillus subtilis (357 aa); 24.3% identity in 284 aa overlap
NP_563135.1	similar to gp:AF189151_7 WbdB from Klebsiella pneumoniae (381 aa); 30.8% identity in 357 aa overlap
NP_563136.1	similar to pir:F69987 spore coat protein homolog ytaA from Bacillus subtilis (357 aa); 24.2% identity in 318 aa overlap
NP_563137.1	no significant homology
NP_563138.1	similar to pir:F69987 spore coat protein homolog ytaA from Bacillus subtilis (357 aa); 21.7% identity in 281 aa overlap
NP_563139.1	similar to gp:AF189151_7 WbdB from Klebsiella pneumoniae (381 aa); 35.3% identity in 266 aa overlap
NP_563140.1	similar to N-terminal of pir:C71336 hypothetical protein TP034 from Treponema pallidum (469 aa); 25.5% identity in 153 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563141.1	partially similar to pir:C71252 hypothetical protein TP1032 from syphilis spirochete (144 aa); 31.3% identity in 64 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563142.1	similar to sp:TA15_TREPA 15 KDA LIPOPROTEIN PRECURSOR (MAJOR MEMBRANE IMMUNOGEN) from Treponema pallidum (141 aa); 33.1% identity in 145 aa overlap. N-terminal signal sequence was found by PSORT
NP_563143.1	similar to sp:APBE_TREPA THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE PRECURSOR from Treponema pallidum (362 aa); 32.8% identity in 332 aa overlap
NP_563144.1	similar to sp:YXER_BACSU HYPOTHETICAL 38.4 KDA PROTEIN IN IDH-DEOR INTERGENIC REGION from Bacillus subtilis (370 aa); 32.1% identity in 330 aa overlap. N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_563145.1	similar to gpu:AP001510_84 PTS system, cellobiose-specific enzyme II, B component (EIIA-cell) from Bacillus halodurans (98 aa); 49% identity in 96 aa overlap.  N-terminal signal sequence was found by PSORT; cellobiose-specific enzyme IIB component
NP_563146.1	similar to pir:A69643 serine proteinase Do, heat-shock protein htrA from Bacillus subtilis (449 aa); 45.2% identity in 321 aa overlap. 1  transmembrane region was found by PSORT; heat-shock protein HtrA
NP_563147.1	similar to pir:D69747 hypothetical protein ybdG from Bacillus subtilis (296 aa); 23.3% identity in 288 aa overlap. 1  transmembrane region was found by PSORT
NP_563148.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
NP_563149.1	no significant homology
NP_563150.1	partially similar to sp:TESA_ECOLI ACYL-COA THIOESTERASE I PRECURSOR (EC 3.1.2.-) (PROTEASE I) (LYSOPHOSPHOLIPASE L1) (EC 3.1.1.5) (LECITHINASE B) from Escherichia col (208 aa); 26.3% identity in 99 aa overlap
NP_563151.1	similar to pir:C75218 probable monooxygenase PAB0184 from Pyrococcus abyssi (strain Orsay) (407 aa); 36.4% identity in 313 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563152.1	similar to pir:E81297 hypothetical protein Cj1505c from Campylobacter jejuni (strain NCTC 11168) (190 aa); 29.8% identity in 188 aa overlap
NP_563153.1	similar to pir:D69815 conserved hypothetical protein yfnI from Bacillus subtilis (653 aa); 32.8% identity in 567 aa overlap. 5  transmembrane regions were found by PSORT.
NP_563154.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563155.1	similar to pir:H69762 two-component sensor histidine kinase homolog yclK from Bacillus subtilis (473 aa); 30.3% identity in 435 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563156.1	similar to prf:2222216A   drrA gene from Thermotoga maritima (239 aa); 45.5% identity in 178 aa overlap
NP_563157.1	no significant homology
NP_563158.1	similar to gpu:AP001511_262 BH1373 gene product from Bacillus halodurans (270 aa); 44.5% identity in 256 aa overlap. 1  transmembrane region was found by PSORT
NP_563159.1	similar to prf:2202211A Met(S-adenosyl)-dependent methyltransferase from Escherichia coli (261 aa); 25.3% identity in 233 aa overlap. 1  transmembrane region was found by PSORT
NP_563160.1	similar to sp:LSPA_STACA LIPOPROTEIN SIGNAL PEPTIDASE (EC 3.4.23.36) (PROLIPOPROTEIN SIGNAL PEPTIDASE) (SIGNAL PEPTIDASE II) (SPASE II) from Staphylococcus carnosus (159 aa); 23.4% identity in 145 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563161.1	no significant homology
NP_563162.1	partially similar to pir:G71006 probable thiamin-binding periplasmic protein precursor from Pyrococcus horikoshii (347 aa); 30.1% identity in 103 aa overlap
NP_563163.1	similar to gp:AP001508_236 iron (III) transport system (iron (III)-binding protein) from Bacillus halodurans (372 aa); 24.4% identity in 164 aa overlap. N-terminal signal sequence was found by PSORT
NP_563164.1	similar to pir:B70156 probable chromate transport protein from Borrelia burgdorferi (177 aa); 34.8% identity in 178 aa overlap. 5  transmembrane regions were found by PSORT.
NP_563165.1	partially similar to pir:G71379 probable chromate transport protein from Treponema pallidum (456 aa); 35.8% identity in 173 aa overlap. 4  transmembrane regions were found by PSORT.
NP_563166.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563167.1	similar to pir:JU0300 X-His dipeptidase (EC 3.4.13.3) from Escherichia coli (485 aa); 38.4% identity in 482 aa overlap. 1  transmembrane region was found by PSORT
NP_563168.1	similar to sp:YSNB_BACSU HYPOTHETICAL 19.2 KDA PROTEIN IN RPH-ILVB INTERGENIC REGION from Bacillus subtilis (171 aa); 34.4% identity in 154 aa overlap
NP_563169.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
NP_563170.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
NP_563171.1	no significant homology
NP_563172.1	partially similar to sp:OPPA_BACSU OLIGOPEPTIDE-BINDING PROTEIN OPPA PRECURSOR from Bacillus subtilis (545 aa); 29.6% identity in 257 aa overlap. N-terminal signal sequence was found by PSORT
NP_563173.1	no significant homology
NP_563174.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563175.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB
NP_563176.1	similar to gpu:AP001509_86 ATP-dependent DNA helicase from Bacillus halodurans (747 aa); 50.1% identity in 742 aa overlap
NP_563177.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563178.1	partially similar to gpu:AP001514_135 spore coat-associated protein from Bacillus halodurans (210 aa); 27.2% identity in 92 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563179.1	no significant homology  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563180.1	similar to gpu:AP001518_104 16S pseudouridylate synthase from Bacillus halodurans (238 aa); 49.1% identity in 214 aa overlap
NP_563181.1	similar to sp:COLA_CLOPE MICROBIAL COLLAGENASE PRECURSOR (EC 3.4.24.3) (120 KDA COLLAGENASE) from Clostridium perfringens (1104 aa); 19.5% identity in 416 aa overlap
NP_563182.1	similar to gpu:AP001511_263 BH1374 gene product from Bacillus halodurans (157 aa); 41.7% identity in 132 aa overlap
NP_563183.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
NP_563184.1	no significant homology 1  transmembrane region was found by PSORT
NP_563185.1	similar to sp:APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPF from Bacillus subtilis (329 aa); 59.9% identity in 317 aa overlap; ATP-binding protein
NP_563186.1	similar to gpu:AP001519_161 oligopeptide ABC transporter (ATP-binding protein) from Bacillus halodurans (329 aa); 56% identity in 323 aa overlap. 1  transmembrane region was found by PSORT; ATP-binding protein
NP_563187.1	similar to gp:AF042861_3  OppC from Treponema denticola (338 aa); 42.7% identity in 246 aa overlap. 6 transmembrane regions were found by PSORT.; permease
NP_563188.1	similar to pir:B75381 peptide ABC transporter, permease from Deinococcus radiodurans (strain R1) (333 aa); 41% identity in 322 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.; permease
NP_563189.1	similar to sp:APPA_BACSU OLIGOPEPTIDE-BINDING PROTEIN APPA PRECURSOR from Bacillus subtilis (543 aa); 33.6% identity in 506 aa overlap.  N-terminal signal sequence was found by PSORT; binding protein
NP_563190.1	similar to gp:PSNARXL_3 nitrate extrusion protein from Pseudomonas aeruginosa (431 aa); 27.3% identity in 315 aa overlap. 11  transmembrane regions were found by PSORT.
NP_563191.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
NP_563192.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
NP_563193.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563194.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563195.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563196.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563197.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563198.1	no significant homology 1  transmembrane region was found by PSORT
NP_563199.1	similar to pir:C75477 probable fimbrial assembly protein PilM from Deinococcus radiodurans (strain R1) (391 aa); 18.3% identity in 334 aa overlap
NP_563200.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563201.1	similar to pir:A75344 pilin biogenesis protein from Deinococcus radiodurans (strain R1) (406 aa); 32.3% identity in 400 aa overlap. 3  transmembrane regions were found by PSORT.
NP_563202.1	similar to gpu:AE004128_11 MSHA biogenesis protein MshE from Vibrio cholerae (575 aa); 41% identity in 558 aa overlap
NP_563203.1	partially similar to pir:A75321 prepilin peptidase, type IV from Deinococcus radiodurans (strain R1) (388 aa); 38.8% identity in 201 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563204.1	similar to sp:PPDA_CLOPE PREPILIN PEPTIDASE DEPENDENT PROTEIN A PRECURSOR from Clostridium perfringens (140 aa); 78.6% identity in 140 aa overlap. 1 transmembrane region was found by PSORT
NP_563205.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
NP_563206.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
NP_563207.1	no significant homology  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_563208.1	similar to pir:B69836 hypothetical protein yisB from Bacillus subtilis (100 aa); 52.2% identity in 92 aa overlap
NP_563209.1	similar to pir:E69045 8-oxoguanine DNA glycosylase from Methanobacterium thermoautotrophicum (strain Delta H) (312 aa); 34.7% identity in 245 aa overlap
NP_563210.1	no significant homology 1  transmembrane region was found by PSORT
NP_563211.1	similar to gp:CPSPC21_1 spc21 gene product from Clostridium perfringens (82 aa); 98.8% identity in 82 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563212.1	similar to sp:YWJA_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN ACDA 5'REGION from Bacillus subtilis (575 aa); 46.1% identity in 564 aa overlap. 4  transmembrane regions were found by PSORT.; ATP-binding protein
NP_563213.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
NP_563214.1	similar to sp:FIXB_CLOAB FIXB PROTEIN from Clostridium acetobutylicum (334 aa); 73.9% identity in 329 aa overlap
NP_563215.1	similar to sp:ETFB_CLOAB ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT (BETA-ETF) (ELECTRON TRANSFER FLAVOPROTEIN SMALL SUBUNIT) (ETFSS) from Clostridium acetobutylicum (252 aa); 71.4% identity in 245 aa overlap
NP_563216.1	similar to sp:ACDS_CLOAB ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC (EC 1.3.99.2) (SCAD) (BUTYRYL-COA DEHYDROGENASE) from Clostridium acetobutylicum (379 aa); 72.6% identity in 379 aa overlap. 1  transmembrane region was found by PSORT
NP_563217.1	catalyzes the formation of crotonoyl-CoA from (3R)-3-hydroxybutanoyl-CoA
NP_563218.1	modulates transcription in response to the NADH/NAD(+) redox state
NP_563219.1	similar to pir:D70041 heavy metal-transporting ATPase homolog yvgW from Bacillus subtilis (702 aa); 55.8% identity in 588 aa overlap. 6  transmembrane regions were found by PSORT.
NP_563220.1	similar to sp:CADF_STAAU CADMIUM EFFLUX SYSTEM ACCESSORY PROTEIN HOMOLOG from Staphylococcus aureus (121 aa); 45.1% identity in 113 aa overlap; ArsC family
NP_563221.1	similar to pir:C69405 hypothetical protein AF1244 from Archaeoglobus fulgidus (161 aa); 38.3% identity in 60 aa overlap
NP_563222.1	no significant homology
NP_563223.1	no significant homology
NP_563224.1	similar to pir:B75596 mannose-1-phosphate guanylyltransferase from Deinococcus radiodurans (strain R1) (372 aa); 34.8% identity in 359 aa overlap
NP_563225.1	similar to gpu:AP001520_142 beta-glucosidase from Bacillus halodurans (466 aa); 57.5% identity in 457 aa overlap
NP_563226.1	similar to gpu:AP001510_40 aldehyde dehydrogenase from Bacillus halodurans (452 aa); 47% identity in 455 aa overlap
NP_563227.1	similar to gpu:AP001510_192 BH1017 gene product from Bacillus halodurans (202 aa); 30% identity in 200 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563228.1	similar to sp:YQKD_BACSU HYPOTHETICAL 34.6 KDA PROTEIN IN GLNQ-ANSR INTERGENIC REGION from Bacillus subtilis (305 aa); 34.5% identity in 223 aa overlap. N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_563229.1	similar to gpu:AE004294_7 pseudouridine synthase 1 protein from Vibrio cholerae (340 aa); 67.4% identity in 239 aa overlap
NP_563230.1	no significant homology 1  transmembrane region was found by PSORT
NP_563231.1	similar to gpu:AP001514_133 BH2127 gene product from Bacillus halodurans (194 aa); 36.9% identity in 130 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563232.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
NP_563233.1	similar to gpu:AE004359_10 Na+/H+ antiporter,  from Vibrio cholerae (447 aa); 36.5% identity in 414 aa overlap.  N-terminal signal sequence and 9  transmembrane regions were found by PSORT.
NP_563234.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
NP_563235.1	no significant homology
NP_563236.1	no significant homology
NP_563237.1	similar to sp:YQEF_BACSU HYPOTHETICAL 27.6 KDA LIPOPROTEIN IN NUCB-AROD INTERGENIC REGION from Bacillus subtilis (243 aa); 32% identity in 181 aa overlap
NP_563238.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
NP_563239.1	similar to pir:E71251 probable oligoendopeptidase F from Treponema pallidum (589 aa); 44.6% identity in 560 aa overlap
NP_563240.1	similar to pir:C70449 conserved hypothetical protein aq_1731 from Aquifex aeolicus (186 aa); 37.6% identity in 178 aa overlap
NP_563241.1	partially similar to pir:G69742 hypothetical protein ybaJ from Bacillus subtilis (255 aa); 36.6% identity in 101 aa overlap. 1  transmembrane region was found by PSORT
NP_563242.1	no significant homology
NP_563243.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NP_563244.1	similar to pir:A75157 hypothetical protein PAB2074 from Pyrococcus abyssi (strain Orsay) (101 aa); 36.4% identity in 66 aa overlap
NP_563245.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NP_563246.1	partially similar to gp:SCL2_1 hypothetical protein SCL2.01 from Streptomyces coelicolor A3(2) (328 aa); 24.4% identity in 197 aa overlap
NP_563247.1	similar to gp:EFA012050_2 VicK protein from Enterococcus faecalis (611 aa); 40.4% identity in 225 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563248.1	similar to gp:SPAJ6394_1 response regulator from Streptococcus pneumoniae (235 aa); 41.5% identity in 224 aa overlap
NP_563249.1	no significant homology
NP_563250.1	similar to pir:B69794 hypothetical protein yerC from Bacillus subtilis (104 aa); 63% identity in 92 aa overlap
NP_563251.1	similar to pir:C75527 conserved hypothetical protein from Deinococcus radiodurans (strain R1) (255 aa); 30.5% identity in 233 aa overlap
NP_563252.1	similar to pir:H75549 glycogen debranching enzyme-related protein from Deinococcus radiodurans (strain R1) (804 aa); 29.9% identity in 445 aa overlap
NP_563253.1	similar to pir:S77252 phosphorylase (EC 2.4.1.1) 2 from Synechocystis sp. (strain PCC 6803) (855 aa); 48.5% identity in 753 aa overlap
NP_563254.1	amylomaltase; acts to release glucose from maltodextrins
NP_563255.1	similar to gp:AAC252161_6  alpha-glucosidase from Alicyclobacillus acidocaldarius (728 aa); 35.4% identity in 611 aa overlap
NP_563256.1	similar to sp:MALR_CLOBU TRANSCRIPTIONAL REGULATORY PROTEIN MALR from Clostridium butyricum (335 aa); 61.9% identity in 333 aa overlap; LacI family
NP_563257.1	similar to gp:AAC252161_3  maltose transport membrane protein from Alicyclobacillus acidocaldarius (301 aa); 41.6% identity in 296 aa overlap. 6  transmembrane regions were found by PSORT.; permease
NP_563258.1	similar to gp:AAC252161_2  maltose transport membrane protein from Alicyclobacillus acidocaldarius (321 aa); 39.4% identity in 307 aa overlap. 5  transmembrane regions were found by PSORT.; permease
NP_563259.1	similar to gp:AAC252161_1 maltose binding protein from Alicyclobacillus acidocaldarius (427 aa); 41.7% identity in 405 aa overlap; maltose-binding protein
NP_563260.1	similar to gp:AB035092_6 Orf6 from Clostridium perfringens (313 aa); 96.5% identity in 313 aa overlap
NP_563261.1	similar to gp:AB035092_5 Orf5 from Clostridium perfringen (369 aa); 98.6% identity in 369 aa overlap; ATP-binding protein
NP_563262.1	similar to gp:AB016820_1 hydrogenase (EC 1.18.99.1) from Clostridium perfringens (572 aa); 100% identity in 572 aa overlap
NP_563263.1	catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate
NP_563264.1	catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate
NP_563265.1	similar to gp:AB035092_1 Orf1 from Clostridium perfringens (533 aa); 94% identity in 533 aa overlap. 1 transmembrane region was found by PSORT
NP_563266.1	similar to pir:A69745 hypothetical protein ybbR from Bacillus subtilis (483 aa); 22.8% identity in 403 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563267.1	similar to gpu:AP001507_265 BH0265 gene product from Bacillus halodurans (274 aa); 42.8% identity in 229 aa overlap. 4  transmembrane regions were found by PSORT.
NP_563268.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563269.1	similar to rf:2220325A   MurNAc-Ala amidase from Bacillus cereus (259 aa); 44.4% identity in 126 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563270.1	similar to pir:A69444 thioredoxin reductase (NADPH) (EC 1.6.4.5) from Archaeoglobus fulgidus (300 aa); 40.7% identity in 280 aa overlap
NP_563271.1	similar to sp:THIO_CYACA THIOREDOXIN. from Chloroplast Cyanidium caldarium (107 aa); 50% identity in 100 aa overlap
NP_563272.1	similar to gpu:AP001511_18 isoaspartyl dipeptidase from Bacillus halodurans (391 aa); 47.7% identity in 386 aa overlap
NP_563273.1	similar to gpu:AP001517_195 PTS system, enzyme I from Bacillus halodurans (572 aa); 58.1% identity in 534 aa overlap; PTS system enzyme I
NP_563274.1	similar to sp:YQIR_BACSU  SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR IN MMGE-BFMBAA INTERGENIC REGION from Bacillus subtilis (692 aa); 38.9% identity in 524 aa overlap. 1  transmembrane region was found by PSORT
NP_563275.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
NP_563276.1	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE
NP_563277.1	Catalyzes the rate-limiting step in dNTP synthesis
NP_563278.1	similar to gpu:AP001518_316 arsenate reductase from Bacillus halodurans (119 aa); 60.2% identity in 118 aa overlap
NP_563279.1	similar to gpu:AP001511_43 BH1154 gene product from Bacillus halodurans (750 aa); 43.2% identity in 292 aa overlap.Also similar to many two-component sensor histidine kinases. 4  transmembrane regions were found by PSORT.
NP_563280.1	similar to gpu:AP001511_42 two-component response regulator from Bacillus halodurans (232 aa); 62.6% identity in 227 aa overlap
NP_563281.1	similar to gpu:AP001519_119 BH3604 gene product from Bacillus halodurans (293 aa); 36.6% identity in 273 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_563282.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563283.1	similar to gpu:AP001507_239 germination specific N-acetylmuramoyl-L-alanine amidase from Bacillus halodurans (238 aa); 40.6% identity in 197 aa overlap. N-terminal signal sequence was found by PSORT
NP_563284.1	similar to gpu:AP001511_296 BH1407 gene product from Bacillus halodurans (543 aa); 38.6% identity in 502 aa overlap.  N-terminal signal sequence and 8 transmembrane regions were found by PSORT.
NP_563285.1	forms a direct contact with the tRNA during translation
NP_563286.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
NP_563287.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
NP_563288.1	similar to pir:T44414 hypothetical protein ybaF from Bacillus halodurans (265 aa); 40.7% identity in 248 aa overlap. 6  transmembrane regions were found by PSORT.
NP_563289.1	with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene
NP_563290.1	with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene
NP_563291.1	is a component of the macrolide binding site in the peptidyl transferase center
NP_563292.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
NP_563293.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
NP_563294.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
NP_563295.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
NP_563296.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
NP_563297.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
NP_563298.1	no significant homology
NP_563299.1	similar to pir:T44405 methionyl aminopeptidase (EC 3.4.11.18) map from Bacillus halodurans (248 aa); 55.7% identity in 246 aa overlap
NP_563300.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
NP_563301.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
NP_563302.1	late assembly protein
NP_563303.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
NP_563304.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
NP_563305.1	binds 5S rRNA along with protein L5 and L25
NP_563306.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
NP_563307.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NP_563308.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
NP_563309.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
NP_563310.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
NP_563311.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
NP_563312.1	primary binding protein; helps mediate assembly; involved in translation fidelity
NP_563313.1	one of the stabilizing components for the large ribosomal subunit
NP_563314.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
NP_563315.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
NP_563316.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
NP_563317.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NP_563318.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
NP_563319.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
NP_563320.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
NP_563321.2	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
NP_563322.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
NP_563323.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_563324.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
NP_563325.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
NP_563326.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
NP_563327.1	similar to pir:G69751 ribosomal protein L7AE family homolog ybxF from Bacillus subtilis (82 aa); 47.8% identity in 69 aa overlap
NP_563328.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
NP_563329.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
NP_563330.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
NP_563331.2	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
NP_563332.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
NP_563333.1	binds directly to 23S ribosomal RNA
NP_563334.1	Modulates Rho-dependent transcription termination
NP_563335.1	forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
NP_563336.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif
NP_563337.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
NP_563338.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NP_563339.1	similar to gpu:AP001507_114 BH0114 gene product from Bacillus halodurans (170 aa); 41.3% identity in 167 aa overlap
NP_563340.1	similar to sp:YACO_BACSU HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YACO (EC 2.1.1.-) from Bacillus subtilis (249 aa); 50.4% identity in 242 aa overlap
NP_563341.1	flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor
NP_563342.1	similar to gpu:AP001507_112 BH0112 gene product from Bacillus halodurans (139 aa); 50% identity in 114 aa overlap
NP_563343.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
NP_563344.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
NP_563345.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
NP_563346.1	similar to gpu:AP001507_106 BH0106 gene product from Bacillus halodurans (362 aa); 47.7% identity in 367 aa overlap.  N-terminal signal sequence and 3 transmembrane regions were found by PSORT.
NP_563347.1	no significant homology
NP_563348.1	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair
NP_563349.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
NP_563350.1	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate
NP_563351.1	similar to pir:D70044 transcription regulator GntR family homolog yvoA from Bacillus subtilis (243 aa); 37.3% identity in 225 aa overlap; GntR family
NP_563352.1	no significant homology
NP_563353.1	similar to sp:YRUB_CLOPA HYPOTHETICAL GLUTAREDOXIN-LIKE 8.6 KDA PROTEIN IN RUBREDOXIN OPERON (ORF B) from Clostridium pasteurianum (75 aa); 58.7% identity in 75 aa overlap
NP_563354.1	similar to sp:GAPN_STRMU NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (EC 1.2.1.9) (NON-PHOSPHORYLATING GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE) (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE [NADP+]) (TRIOSEPHOSPHATE DEHYDROGENASE) from Streptococcus mutans (475 aa); 57.1% identity in 475 aa overlap
NP_563355.1	similar to sp:YRUB_CLOPA HYPOTHETICAL GLUTAREDOXIN-LIKE 8.6 KDA PROTEIN IN RUBREDOXIN OPERON (ORF B) from Clostridium pasteurianum (75 aa); 41.3% identity in 75 aa overlap
NP_563356.1	similar to sp:R34K_CLOPA 34.2 KDA PROTEIN IN RUBREDOXIN OPERON (EC 1.6.4.-) (ORF A) from Clostridium pasteurianum (308 aa); 51.3% identity in 304 aa overlap. N-terminal signal sequence was found by PSORT
NP_563357.1	similar to sp:CLPC_BACSU NEGATIVE REGULATOR OF GENETIC COMPETENCE CLPC/MECB from Bacillus subtilis (810 aa); 53.1% identity in 813 aa overlap
NP_563358.1	similar to sp:YACI_BACSU HYPOTHETICAL 41.1 KDA PROTEIN IN LYSS-MECB INTERGENIC REGION (ORFX) from Bacillus subtilis (363 aa); 33.8% identity in 328 aa overlap
NP_563359.1	similar to gp:LMU40604_2 Listeria monocytogenes ClpC ATPase (mec) gene, complete cds from Listeria monocytogenes (174 aa); 34% identity in 162 aa overlap
NP_563360.1	similar to gp:AB031211_4 CtsR from Bacillus halodurans (156 aa); 38.3% identity in 149 aa overlap
NP_563361.1	similar to pir:A72406 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (208 aa); 41.9% identity in 179 aa overlap
NP_563362.1	partially similar to sp:CPHA_ANAVA CYANOPHYCIN SYNTHETASE (EC 6.-.-.-) from Anabaena variabilis (901 aa); 34.6% identity in 338 aa overlap
NP_563363.1	similar to sp:FER_CLOPE FERREDOXIN from Clostridium perfringens (55 aa); 100% identity in 55 aa overlap
NP_563364.1	similar to gpu:AP001507_45 signal peptidase-like protein from Bacillus halodurans (275 aa); 59.8% identity in 249 aa overlap
NP_563365.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
NP_563366.1	similar to gp:TT11467_4 hypothetical 12.0kD protein from Thermus thermophilu (109 aa); 42.2% identity in 109 aa overlap
NP_563367.1	no significant homology  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563368.1	similar to prf:2407216B   ORF from Bacillus natto (182 aa); 30.4% identity in 158 aa overlap
NP_563369.1	similar to sp:YAAO_BACSU HYPOTHETICAL 53.2 KDA PROTEIN IN XPAC-ABRB INTERGENIC REGION from Bacillus subtilis (480 aa); 33.3% identity in 451 aa overlap
NP_563370.1	similar to sp:CSFB_BACSU CSFB PROTEIN from Bacillus subtilis (64 aa); 43.2% identity in 44 aa overlap
NP_563371.1	partially similar to pir:D64883 hypothetical protein b1337 from Escherichia coli (481 aa); 31.8% identity in 245 aa overlap
NP_563372.1	no significant homology  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563373.1	similar to pir:A75272 probable transport protein from Deinococcus radiodurans (strain R1) (312 aa); 42.7% identity in 314 aa overlap. 2  transmembrane regions were found by PSORT.
NP_563374.1	similar to sp:YKFA_BACSU HYPOTHETICAL 25.4 KDA PROTEIN IN DPPE-HMP INTERGENIC REGION from Bacillus subtilis (234 aa); 40.3% identity in 211 aa overlap
NP_563375.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
NP_563376.1	catalyzes the formation of biotin from dethiobiotin and sulfur
NP_563377.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
NP_563378.1	similar to pir:E71292 probable immunity protein (mccF) from Treponema pallidum (337 aa); 31.6% identity in 285 aa overlap
NP_563379.1	similar to gpu:AE004214_3 peptidase, M20A family from Vibrio cholerae (368 aa); 44.8% identity in 362 aa overlap
NP_563380.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_563381.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
NP_563382.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NP_563383.1	similar to gpu:AP001507_97 transcriptional regulator involved in nitrogen regulation (NifR3/Smm1 family) from Bacillus halodurans (334 aa); 46.7% identity in 321 aa overlap; NifR3/Smm1 family
NP_563384.1	type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP
NP_563385.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
NP_563386.1	similar to pir:T31466 cell-division protein homolog ftsH from Heliobacillus mobilis (601 aa); 52% identity in 596 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_563387.1	similar to sp:HPRT_BACSU HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.8) (HGPRT) (HGPRTASE) from Bacillus subtilis (180 aa); 53.7% identity in 177 aa overlap. 1  transmembrane region was found by PSORT
NP_563388.1	similar to pir:S66097 cell-cycle protein homolog yacA from Bacillus subtilis (486 aa); 30.4% identity in 441 aa overlap
NP_563389.1	similar to gpu:AP001507_78 stage II sporulation protein E from Bacillus halodurans (830 aa); 23.9% identity in 762 aa overlap. 11  transmembrane regions were found by PSORT.
NP_563390.1	similar to sp:YABR_BACSU HYPOTHETICAL 14.2 KDA PROTEIN IN DIVIC-SPOIIE INTERGENIC REGION from Bacillus subtilis (128 aa); 45% identity in 131 aa overlap
NP_563391.1	similar to gp:AF023181_4 DivIC homolog from Listeria monocytogenes (128 aa); 31.1% identity in 74 aa overlap. 1  transmembrane region was found by PSORT
NP_563392.1	similar to sp:YABQ_BACSU HYPOTHETICAL 25.1 KDA PROTEIN IN MFD-DIVIC INTERGENIC REGION from Bacillus subtilis (211 aa); 30.6% identity in 121 aa overlap. N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_563393.1	similar to gpu:AP001507_74 BH0074 gene product from Bacillus halodurans (103 aa); 43.8% identity in 64 aa overlap
NP_563394.1	similar to gp:AF023181_3 unknown protein from Listeria monocytogenes (92 aa); 52.3% identity in 86 aa overlap
NP_563395.1	similar to sp:DBH_CLOPA DNA-BINDING PROTEIN H from Clostridium pasteurianum (91 aa); 81.1% identity in 90 aa overlap
NP_563396.1	similar to sp:YABN_BACSU HYPOTHETICAL 56.1 KDA PROTEIN IN MFD-DIVIC INTERGENIC REGION from Bacillus subtilis (489 aa); 47.7% identity in 484 aa overlap
NP_563397.1	similar to sp:SP5B_BACSU STAGE V SPORULATION PROTEIN B from Bacillus subtilis (518 aa); 27.7% identity in 505 aa overlap.  N-terminal signal sequence and 11 transmembrane regions were found by PSORT.
NP_563398.1	similar to gpu:AP001507_70 stage V sporulation protein T from Bacillus haloduran (179 aa); 63.7% identity in 182 aa overlap. 1  transmembrane region was found by PSORT
NP_563399.1	cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein
NP_563400.1	similar to sp:MFD_BACSU TRANSCRIPTION-REPAIR COUPLING FACTOR (TRCF) from Bacillus subtili (1177 aa); 48.4% identity in 1078 aa overlap
NP_563401.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
NP_563402.1	similar to sp:HTRA_CHLTR PROBABLE SERINE PROTEASE DO-LIKE PRECURSOR (EC 3.4.21.-) (59 KDA IMMUNOGENIC PROTEIN) (SK59) from Chlamydia trachomatis (serotype D, strain UW3/Cx) (497 aa); 31.8% identity in 274 aa overlap. 1  transmembrane region was found by PSORT; proteinase Do
NP_563403.1	similar to pir:H69762 two-component sensor histidine kinase homolog yclK from Bacillus subtilis (473 aa); 28.2% identity in 451 aa overlap.  N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563404.1	similar to gpu:AP001512_167 two-component response regulator from Bacillus halodurans (238 aa); 51.6% identity in 221 aa overlap
NP_563405.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
NP_563406.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
NP_563407.1	stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus
NP_563408.1	similar to gpu:AP001507_62 transcriptional repressor of the purine operon from Bacillus halodurans (282 aa); 42.6% identity in 258 aa overlap
NP_563409.2	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
NP_563410.1	similar to gpu:AP001515_47 transcriptional regulator from Bacillus halodurans (337 aa); 33.9% identity in 304 aa overlap; LacI family
NP_563411.1	catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation
NP_563412.1	similar to pir:H82087 NupC family protein VC2352 from Vibrio cholerae (group O1 strain N16961) (418 aa); 43.4% identity in 401 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_563413.1	similar to gpu:AP001518_10 prolidase (proline dipeptidase) from Bacillus halodurans (364 aa); 35.7% identity in 353 aa overlap
NP_563414.1	similar to pir:G72200 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (254 aa); 39% identity in 223 aa overlap
NP_563415.1	no significant homology
NP_563416.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
NP_563417.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
NP_563418.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_563419.1	similar to pir:D69136 anaerobic ribonucleotide reductase activase (EC 1.97.1.-) from Methanobacterium thermoautotrophicum (strain Delta H) (237 aa); 40.1% identity in 157 aa overlap
NP_563420.1	no significant homology
NP_563421.1	similar to gpu:AE004241_1 conserved hypothetical protein from Vibrio cholerae (458 aa); 30.2% identity in 450 aa overlap.  N-terminal signal sequence and 8 transmembrane regions were found by PSORT.
NP_563422.1	catalyzes the formation of inosine from adenosine
NP_563423.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
NP_563424.1	similar to gp:AF011544_5 YecC from Bacillus subtilis (331 aa); 32.4% identity in 281 aa overlap. N-terminal signal sequence was found by PSORT
NP_563425.1	similar to prf:2509371A   grrY gene:SUBUNIT=selenoprotein B from Eubacterium acidaminophilum (280 aa); 27.1% identity in 277 aa overlap
NP_563426.1	partially similar to pir:S78039 hypothetical protein c0114 from Sulfolobus solfataricus (135 aa); 40% identity in 65 aa overlap. 1  transmembrane region was found by PSORT
NP_563427.1	3Fe-4S; similar to sp:FER_THELI FERREDOXIN from Thermococcus litoralis (59 aa); 59.7% identity in 62 aa overlap
NP_563428.1	similar to sp:MRP_CLOPE MRP PROTEIN HOMOLOG (FRAGMENT) from Clostridium perfringens (140 aa); 100% identity in 132 aa overlap
NP_563429.1	no significant homology
NP_563430.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
NP_563431.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563432.1	no significant homology
NP_563433.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
NP_563434.1	similar to gpu:AP001507_56 BH0056 gene product from Bacillus halodurans (185 aa); 46.9% identity in 177 aa overlap
NP_563435.1	similar to sp:YABE_BACSU HYPOTHETICAL 47.7 KDA PROTEIN IN METS-KSGA INTERGENIC REGION from Bacillus subtilis (437 aa); 36.9% identity in 301 aa overlap. N-terminal signal sequence was found by PSORT
NP_563436.1	similar to sp:YABD_BACSU HYPOTHETICAL 29.2 KDA PROTEIN IN METS-KSGA INTERGENIC REGION from Bacillus subtilis (255 aa); 46.4% identity in 252 aa overlap
NP_563437.1	partially similar to pir:B69828 hypothetical protein yheB from Bacillus subtilis (377 aa); 32% identity in 169 aa overlap.  N-terminal signal sequence and 1 transmembrane region were found by PSORT
NP_563438.1	similar to prf:2511460B   dnrE gene from Pseudomonas stutzeri (231 aa); 24.5% identity in 220 aa overlap; Crp/Fnr family
NP_563439.1	similar to sp:SYM_ARCFU METHIONYL-TRNA SYNTHETASE (EC 6.1.1.10) (METHIONINE-TRNA LIGASE) (METRS) from Archaeoglobus fulgidus (658 aa); 35.3% identity in 504 aa overlap
NP_563440.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
NP_563441.1	no significant homology  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_563442.1	no significant homology 5  transmembrane regions were found by PSORT.
NP_563443.1	similar to pir:H81355 probable integral membrane protein Cj0832c from Campylobacter jejuni (strain NCTC 11168) (577 aa); 48.8% identity in 551 aa overlap. N-terminal signal sequence and 12  transmembrane regions were found by PSORT.
NP_563444.1	similar to pir:S38903 hypothetical protein 1 from Clostridium pasteurianum (530 aa); 48.1% identity in 530 aa overlap. 4  transmembrane regions were found by PSORT.
NP_563445.1	no significant homology
NP_563446.1	similar to sp:AMPP_ECOLI XAA-PRO AMINOPEPTIDASE (EC 3.4.11.9) (X-PRO AMINOPEPTIDASE) (AMINOPEPTIDASE P II) (APP-II) (AMINOACYLPROLINE AMINOPEPTIDASE) from Escherichia coli (440 aa); 34.5% identity in 406 aa overlap
NP_563447.1	similar to pir:A49346 aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) / alcohol dehydrogenase (EC 1.1.1.1) E from Clostridium acetobutylicum (862 aa); 67.3% identity in 859 aa overlap. 1  transmembrane region was found by PSORT
NP_563448.1	similar to gpu:AP001512_162 spore maturation protein from Bacillus halodurans (178 aa); 43.6% identity in 156 aa overlap.  N-terminal signal sequence and 3 transmembrane regions were found by PSORT.
NP_563449.1	similar to pir:S74647 spore maturation protein B from Synechocystis sp. (strain PCC 6803) (217 aa); 44.3% identity in 192 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_563450.1	no significant homology
NP_563451.1	similar to gpu:AP001514_169 BH2163 gene product from Bacillus halodurans (464 aa); 32.2% identity in 423 aa overlap. 12  transmembrane regions were found by PSORT.
NP_563452.1	no significant homology 6  transmembrane regions were found by PSORT.
NP_563453.1	similar to gp:AF052290_6  c-type cytochrome biogenesis protein from Synechococcus PCC7002 (246 aa); 32.6% identity in 181 aa overlap.  N-terminal signal sequence and 6  transmembrane regions were found by PSORT.
NP_563454.1	similar to pir:H70444 hypothetical protein aq_1669 from Aquifex aeolicus (164 aa); 37.4% identity in 91 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563455.1	similar to gpu:AF309566_1 transcriptional regulator CcpA from Clostridium perfringens (332 aa); 99.1% identity in 332 aa overlap
NP_563456.1	similar to pir:S49425 sulfide dehydrogenase (EC 1.-.-.-) from Wolinella succinogenes (149 aa); 36.2% identity in 94 aa overlap
NP_563457.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)
NP_563458.1	no significant homology
NP_563459.1	no significant homology 1  transmembrane region was found by PSORT
NP_563460.1	similar to pir:A69814 ABC transporter (ATP-binding protein) homolog yfmR from Bacillus subtilis (629 aa); 47.1% identity in 637 aa overlap. 1  transmembrane region was found by PSORT; ATP-binding protein
NP_563461.1	similar to gpu:AP001510_5 BH0830 gene product from Bacillus halodurans (186 aa); 35.5% identity in 155 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563462.1	similar to gpu:AP001516_108 transcriptional regulator of extracellular enzyme genes from Bacillus halodurans (224 aa); 36.7% identity in 218 aa overlap
NP_563463.1	no significant homology
NP_563464.1	similar to pir:C72220 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (391 aa); 40.6% identity in 382 aa overlap
NP_563465.1	similar to pir:G72254 hypothetical protein from Thermotoga maritima (strain MSB8) (138 aa); 39.5% identity in 114 aa overlap
NP_563466.1	similar to pir:F72254 hypothetical protein TM1433 from Thermotoga maritima (strain MSB8) (403 aa); 43.4% identity in 415 aa overlap
NP_563467.1	similar to pir:E72254 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (479 aa); 41.9% identity in 458 aa overlap. Also similar to pir:B75218 glycerol-3-phosphate dehydrogenase (glpa) PAB0183 from Pyrococcus abyssi (strain Orsay).  N-terminal signal sequence was found by PSORT
NP_563468.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
NP_563469.1	similar to sp:YGCP_ECOLI HYPOTHETICAL 20.8 KDA PROTEIN IN CYSJ-ENO INTERGENIC REGION from Escherichia coli (strain K-12 (191 aa); 40.6% identity in 180 aa overlap. Also similar to pir:D72254 glycerol uptake operon antiterminator from Thermotoga maritima (strain MSB8). 1 transmembrane region was found by PSORT
NP_563470.1	similar to sp:GLPF_THEMA PROBABLE GLYCEROL UPTAKE FACILITATOR PROTEIN from Thermotoga maritima (strain MSB8) (234 aa); 53.7% identity in 231 aa overlap.  N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563471.1	no significant homology
NP_563472.1	catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate
NP_563473.1	similar to pir:D69999 conserved hypothetical protein ytqA from Bacillus subtilis (322 aa); 55.3% identity in 302 aa overlap
NP_563474.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563475.1	similar to pir:H69867 conserved hypothetical protein ykvI from Bacillus subtilis (347 aa); 28% identity in 329 aa overlap.  N-terminal signal sequence and 9 transmembrane regions were found by PSORT.
NP_563476.1	similar to pir:I40824 spore cortex-lytic enzyme precursor from Clostridium perfringen (438 aa); 96.1% identity in 438 aa overlap
NP_563477.1	similar to prf:2204349A   ORF 1 from Clostridium perfringens (242 aa); 93.8% identity in 242 aa overlap. 1 transmembrane region was found by PSORT
NP_563478.1	similar to prf:2506437A   Ser-type protease from Aquifex pyrophilus (619 aa); 28.5% identity in 494 aa overlap
NP_563479.1	partially similar to prf:2204349A   ORF 1 from Clostridium perfringens (242 aa); 51.3% identity in 236 aa overlap. 1  transmembrane region was found by PSORT
NP_563480.1	partially similar to pir:F72267 hypothetical protein TM1330 from Thermotoga maritima (strain MSB8) (111 aa); 40% identity in 55 aa overlap
NP_563481.1	similar to pir:F75170 hypothetical protein PAB0357 from Pyrococcus abyssi (strain Orsay) (134 aa); 25.9% identity in 108 aa overlap
NP_563482.1	similar to gpu:AP001512_132 peptidyl-prolyl cis-trans isomerase B (EC 5.2.1.8) from Bacillus haloduran (145 aa); 59.5% identity in 131 aa overlap
NP_563483.1	no significant homology
NP_563484.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
NP_563485.1	similar to prf:1407183A   Gln synthetase from Clostridium acetobutylicum (443 aa); 30.3% identity in 426 aa overlap. S.D. unclear
NP_563486.1	no significant homology
NP_563487.1	similar to gpu:AP001520_191 BH3967 gene product from Bacillus halodurans (194 aa); 27.1% identity in 170 aa overlap.  N-terminal signal sequence and 4 transmembrane regions were found by PSORT.
NP_563488.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
NP_563489.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
NP_563490.1	no significant homology
NP_563491.1	similar to C-terminal region of gp:AB016820_1 hydrogenase from Clostridium perfringens (572 aa); 35.4% identity in 311 aa overlap
NP_563492.1	responsible for recognizing base lesions in the genome and initiating base excision DNA repair
NP_563493.1	similar to gpu:AP001510_85 PTS system, cellobiose-specific enzyme II, A component (EIIA-cell) from Bacillus halodurans (110 aa); 55.4% identity in 101 aa overlap; cellobiose-specific enzyme IIA component
NP_563494.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
NP_563495.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
NP_563496.1	similar to pir:G83378 probable short-chain dehydrogenase PA2142 from Pseudomonas aeruginosa (strain PAO1) (286 aa); 53.4% identity in 283 aa overlap
NP_563497.1	similar to pir:H83564 probable short-chain dehydrogenase PA0658 from Pseudomonas aeruginosa (strain PAO1) (266 aa); 35% identity in 260 aa overlap
NP_563498.1	similar to gpu:AP001514_36 BH2030 gene product from Bacillus halodurans (432 aa); 50.5% identity in 426 aa overlap. 12  transmembrane regions were found by PSORT.
NP_563499.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563500.2	catalyzes the reduction of hydroxylamine to ammonia and water
NP_563501.1	similar to pir:H82504 conserved hypothetical protein VCA0076 from Vibrio cholerae (group O1 strain N16961) (458 aa); 47.7% identity in 426 aa overlap. N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_563502.1	similar to gpu:AC022314_20 F9C16.20 from Arabidopsis thaliana (299 aa); 34.7% identity in 144 aa overlap
NP_563503.1	similar to gpu:AP001517_123 maltose transacetylase (maltose O-acetyltransferase) from Bacillus halodurans (186 aa); 55.1% identity in 187 aa overlap
NP_563504.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
NP_563505.1	similar to pir:D75204 site specific DNA-methyltransferase PAB2246 from Pyrococcus abyssi (strain Orsay) (464 aa); 25.2% identity in 476 aa overlap
NP_563506.1	partially similar to pir:A48653 phage infection protein precursor from Lactococcus lactis subsp. lactis (strain C2) (901 aa); 29.8% identity in 487 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563507.1	similar to pir:E69115 phage infection protein homolog from Methanobacterium thermoautotrophicum (strain Delta H) (631 aa); 28.8% identity in 713 aa overlap. N-terminal signal sequence and 5  transmembrane regions were found by PSORT.
NP_563508.1	similar to sp:PHNA_ECOLI PHNA PROTEIN from Escherichia coli (111 aa); 75.9% identity in 108 aa overlap
NP_563509.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563510.1	no significant homology
NP_563511.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
NP_563512.1	no significant homology 4  transmembrane regions were found by PSORT.
NP_563513.1	no significant homology  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.
NP_563514.1	similar to gpu:AP001512_98 oxidoreductase (short chain dehydrogenase/reductase) from Bacillus halodurans (287 aa); 60.2% identity in 284 aa overlap; short chain dehydrogenase/reductase
NP_563515.1	no significant homology
NP_563516.1	SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
NP_563517.1	no significant homology  N-terminal signal sequence and 2  transmembrane regions were found by PSORT.
NP_563518.1	similar to pir:F72412 hypothetical protein from Thermotoga maritima (strain MSB8) (215 aa); 43% identity in 207 aa overlap
NP_563519.1	no significant homology
NP_563520.1	partially similar to gpu:AP001517_192 germination (cortex hydrolysis) and sporulation (stage II, multiple polar septa) from Bacillus halodurans (365 aa); 30% identity in 110 aa overlap
NP_563521.1	similar to gpu:AP001520_247 BH4023 gene product from Bacillus halodurans (264 aa); 41.8% identity in 256 aa overlap
NP_563522.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
NP_563523.1	no significant homology
NP_563524.1	similar to gpu:AP001517_255 BH3133 gene product from Bacillus halodurans (162 aa); 32.2% identity in 149 aa overlap
NP_563525.1	no significant homology  N-terminal signal sequence and 4  transmembrane regions were found by PSORT.
NP_563526.1	similar to pir:A69587 intracellular alkaline serine proteinase aprX from Bacillus subtilis (442 aa); 28.6% identity in 336 aa overlap. 1  transmembrane region was found by PSORT
NP_563527.1	partially similar to pir:S76492 lipoprotein nlpD from Synechocystis sp. (strain PCC 6803) (715 aa); 53.2% identity in 109 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563528.1	similar to sp:DNAD_BACSU DNA REPLICATION PROTEIN DNAD from Bacillus subtilis (232 aa); 23.9% identity in 184 aa overlap
NP_563529.1	acts to load the DnaB helicase onto the initiation site during DNA replication
NP_563530.1	no significant homology
NP_563531.1	similar to gpu:AP001518_110 BH3279 gene product from Bacillus halodurans (422 aa); 30.1% identity in 395 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563532.1	partially similar to prf:2320383A thioesterase from Cuphea wrightii (398 aa); 20.8% identity in 226 aa overlap
NP_563533.1	similar to gp:UCU17097_1 Uc FatB2 from Umbellularia californica (383 aa); 23.8% identity in 244 aa overlap
NP_563534.1	similar to sp:Y746_METJA HYPOTHETICAL PROTEIN MJ0746 from Methanococcus jannaschii (141 aa); 44.8% identity in 143 aa overlap
NP_563535.1	no significant homology
NP_563536.1	no significant homology 1  transmembrane region was found by PSORT
NP_563537.1	partially similar to gpu:AP001513_166 BH1893 gene product from Bacillus halodurans (172 aa); 39.2% identity in 97 aa overlap
NP_563538.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
NP_563539.1	similar to sp:SDHB_BACSU PROBABLE L-SERINE DEHYDRATASE, BETA CHAIN (EC 4.2.1.13) (L-SERINE DEAMINASE) (SDH) (L-SD) from Bacillus subtilis (220 aa); 38.4% identity in 219 aa overlap
NP_563540.1	similar to sp:SDHA_BACSU PROBABLE L-SERINE DEHYDRATASE, ALPHA CHAIN (EC 4.2.1.13) (L-SERINE DEAMINASE) (SDH) (L-SD) from Bacillus subtilis (300 aa); 42.2% identity in 287 aa overlap. 3  transmembrane regions were found by PSORT.
NP_563541.1	similar to sp:AGAS_STRCO  TAGATOSE-6-PHOSPHATE KETOSE/ALDOSE ISOMERASE (EC 5.-.-.-) from Streptomyces coelicolor (385 aa); 41.2% identity in 374 aa overlap. 1 transmembrane region was found by PSORT
NP_563542.1	catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway
NP_563543.1	similar to gpu:AP001508_142 transcriptional regulator (GntR family) from Bacillus halodurans (240 aa); 36% identity in 239 aa overlap; GntR family
NP_563544.1	similar to gp:AP001511_118 BH1229 gene product from Bacillus halodurans (88 aa); 25.9% identity in 58 aa overlap.  N-terminal signal sequence was found by PSORT
NP_563545.1	similar to pir:WQECM3 phosphotransferase system enzyme II (EC 2.7.1.69), mannose-specific, factor IIAB from Escherichia coli (323 aa); 26.6% identity in 128 aa overlap; mannose-specific enzyme IIAB component
NP_563546.1	similar to prf:1305305C   mannose permease IIm from Escherichia coli (283 aa); 35.7% identity in 266 aa overlap. 5  transmembrane regions were found by PSORT.
NP_563547.1	similar to prf:2306373C   mannose phosphotransferase:SUBUNIT=EII from Lactobacillus curvatus (270 aa); 30.8% identity in 240 aa overlap.  N-terminal signal sequence and 3  transmembrane regions were found by PSORT.; mannose-specific enzyme IIC component
NP_563548.1	similar to pir:WQECM3 phosphotransferase system enzyme II (EC 2.7.1.69), mannose-specific, factor IIAB from Escherichia coli (323 aa); 35.8% identity in 151 aa overlap; mannose-specific enzyme IIAB component
NP_563549.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
NP_563550.1	unwinds double stranded DNA
NP_563551.1	similar to gpu:AP001517_173 ATP-dependent proteinase La from Bacillus halodurans (556 aa); 45.2% identity in 465 aa overlap. 1  transmembrane region was found by PSORT
NP_563552.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
NP_563553.1	similar to sp:YYBT_BACSU HYPOTHETICAL 74.3 KDA PROTEIN IN RPLI-COTF INTERGENIC REGION from Bacillus subtilis (659 aa); 34.8% identity in 621 aa overlap. N-terminal signal sequence and 1  transmembrane region were found by PSORT
NP_563554.1	similar to sp:YYBS_BACSU HYPOTHETICAL 34.5 KDA PROTEIN IN RPLI-COTF INTERGENIC REGION from Bacillus subtilis (309 aa); 22.4% identity in 263 aa overlap. N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_563555.1	no significant homology 2  transmembrane regions were found by PSORT.
NP_563556.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
NP_563557.1	similar to gp:BA1242593_64  SSB protein from Bacteriophage A118 (160 aa); 51% identity in 100 aa overlap
NP_563558.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
NP_563559.1	similar to gpu:AP001520_276 BH4052 gene product from Bacillus halodurans (65 aa); 45.6% identity in 57 aa overlap
NP_563560.1	similar to gpu:AP001516_95 BH2666 gene product from Bacillus halodurans (276 aa); 39.3% identity in 183 aa overlap. 2  transmembrane regions were found by PSORT.
NP_563561.1	no significant homology
NP_563562.1	similar to gpu:AP001514_176 BH2170 gene product from Bacillus halodurans (209 aa); 30.7% identity in 199 aa overlap.  N-terminal signal sequence and 5 transmembrane regions were found by PSORT.
NP_563563.1	similar to gpu:AP001520_280 aminotransferase required for NAD biosynthesis (NifS protein) from Bacillus halodurans (383 aa); 37.5% identity in 379 aa overlap
NP_563564.1	similar to pir:C70002 conserved hypothetical protein ytvI from Bacillus subtilis (371 aa); 22.8% identity in 298 aa overlap.  N-terminal signal sequence and 8  transmembrane regions were found by PSORT.
NP_563565.1	similar to gpu:AP001520_278 BH4054 gene product from Bacillus halodurans (216 aa); 49.7% identity in 169 aa overlap. 1  transmembrane region was found by PSORT
NP_563566.1	no significant homology  N-terminal signal sequence was found by PSORT
NP_563567.1	similar to gpu:AP001520_281 stage 0 sporulation protein J from Bacillus halodurans (288 aa); 47.4% identity in 251 aa overlap
NP_563568.1	similar to sp:SOJ_BACSU SOJ PROTEIN from (253 aa); 57.9% identity in 247 aa overlap. 1  transmembrane region was found by PSORT; ParA family
NP_563569.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
NP_563570.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
NP_563571.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
NP_563572.1	similar to sp:JAG_BACSU JAG PROTEIN (SPOIIIJ ASSOCIATED PROTEIN) from Bacillus subtilis (208 aa); 42% identity in 207 aa overlap
NP_563573.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
NP_563574.1	similar to pir:G72251 conserved hypothetical protein from Thermotoga maritima (strain MSB8) (81 aa); 63.2% identity in 68 aa overlap
NP_563575.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
NP_563576.1	in Escherichia coli transcription of this gene is enhanced by polyamines