-- dump date 20140619_043955 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 720554000001 SEQ_END SEQ_END NC_016627.1 4897678 4897678 DR NC_016627.1; contig end 4897678..4897678 Clostridium clariflavum DSM 19732 YP_005044685.1 CDS Clocl_0001 NC_016627.1 567 1901 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 567..1901 Clostridium clariflavum DSM 19732 11560730 YP_005044686.1 CDS Clocl_0002 NC_016627.1 2304 3407 D PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 2304..3407 Clostridium clariflavum DSM 19732 11560873 YP_005044687.1 CDS Clocl_0003 NC_016627.1 3430 3636 D PFAM: S4 domain; TIGRFAM: S4 domain protein YaaA; S4 domain-containing protein YaaA 3430..3636 Clostridium clariflavum DSM 19732 11560875 YP_005044688.1 CDS Clocl_0004 NC_016627.1 3654 4766 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; manually curated; DNA replication and repair protein RecF 3654..4766 Clostridium clariflavum DSM 19732 11560881 YP_005044689.1 CDS Clocl_0005 NC_016627.1 5004 5276 D hypothetical protein 5004..5276 Clostridium clariflavum DSM 19732 11560921 YP_005044690.1 CDS Clocl_0006 NC_016627.1 5433 7358 D PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; manually curated; DNA gyrase subunit B 5433..7358 Clostridium clariflavum DSM 19732 11560975 YP_005044691.1 CDS Clocl_0007 NC_016627.1 7819 8598 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase 7819..8598 Clostridium clariflavum DSM 19732 11560977 YP_005044692.1 CDS Clocl_0008 NC_016627.1 8595 9446 D PFAM: Sugar-specific transcriptional regulator TrmB; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; manually curated; ParB-like partition protein 8595..9446 Clostridium clariflavum DSM 19732 11560979 YP_005044693.1 CDS Clocl_0009 NC_016627.1 9668 10186 D hypothetical protein 9668..10186 Clostridium clariflavum DSM 19732 11560728 YP_005044694.1 CDS Clocl_0010 NC_016627.1 10529 11263 D PFAM: Tetratricopeptide repeat; manually curated; hypothetical protein 10529..11263 Clostridium clariflavum DSM 19732 11562279 YP_005044695.1 CDS Clocl_0011 NC_016627.1 11552 12823 D PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 11552..12823 Clostridium clariflavum DSM 19732 11562280 YP_005044696.1 CDS Clocl_0014 NC_016627.1 13543 14949 R PFAM: Major Facilitator Superfamily; manually curated; arabinose efflux permease family protein complement(13543..14949) Clostridium clariflavum DSM 19732 11562283 YP_005044697.1 CDS Clocl_0015 NC_016627.1 15314 16798 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; NADH/NADPH-dependent glutamate synthase small subunit complement(15314..16798) Clostridium clariflavum DSM 19732 11562284 YP_005044698.1 CDS Clocl_0016 NC_016627.1 16815 21395 R PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase family protein complement(16815..21395) Clostridium clariflavum DSM 19732 11562285 YP_005044699.1 CDS Clocl_0017 NC_016627.1 21902 22405 R hypothetical protein complement(21902..22405) Clostridium clariflavum DSM 19732 11562286 YP_005044700.1 CDS Clocl_0018 NC_016627.1 22517 23098 R PFAM: S-layer homology domain; putative S-layer protein complement(22517..23098) Clostridium clariflavum DSM 19732 11562287 YP_005044701.1 CDS Clocl_0019 NC_016627.1 23568 24074 D hypothetical protein 23568..24074 Clostridium clariflavum DSM 19732 11562288 YP_005044702.1 CDS Clocl_0020 NC_016627.1 24282 26012 R PFAM: Putative peptidoglycan binding domain; G5 domain; VanW like protein; putative vancomycin resistance protein complement(24282..26012) Clostridium clariflavum DSM 19732 11562289 YP_005044703.1 CDS Clocl_0021 NC_016627.1 26470 26793 D PFAM: Protein of unknown function (DUF2508); hypothetical protein 26470..26793 Clostridium clariflavum DSM 19732 11562290 YP_005044704.1 CDS Clocl_0022 NC_016627.1 27116 27388 D PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA; pro-sigmaK processing inhibitor BofA 27116..27388 Clostridium clariflavum DSM 19732 11562291 YP_005044705.1 CDS Clocl_0023 NC_016627.1 27818 31366 D PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 27818..31366 Clostridium clariflavum DSM 19732 11562292 YP_005044706.1 CDS Clocl_0024 NC_016627.1 31483 31611 R hypothetical protein complement(31483..31611) Clostridium clariflavum DSM 19732 11562293 YP_005044707.1 CDS Clocl_0025 NC_016627.1 31894 32736 R hypothetical protein complement(31894..32736) Clostridium clariflavum DSM 19732 11562294 YP_005044708.1 CDS Clocl_0026 NC_016627.1 32945 33664 R PFAM: Helix-turn-helix; Helix-turn-helix protein complement(32945..33664) Clostridium clariflavum DSM 19732 11562295 YP_005044709.1 CDS Clocl_0027 NC_016627.1 34085 34351 D manually curated; hypothetical protein 34085..34351 Clostridium clariflavum DSM 19732 11562296 YP_005044710.1 CDS Clocl_0028 NC_016627.1 34550 35536 D PFAM: Choline/ethanolamine kinase; TIGRFAM: spore coat protein, CotS family; CotS family spore coat protein 34550..35536 Clostridium clariflavum DSM 19732 11562297 YP_005044711.1 CDS Clocl_0029 NC_016627.1 35772 37442 R PFAM: Formate--tetrahydrofolate ligase; formyltetrahydrofolate synthetase complement(35772..37442) Clostridium clariflavum DSM 19732 11562298 YP_005044712.1 CDS Clocl_0030 NC_016627.1 37750 38621 D PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG; manually curated; sporulation peptidase YabG join(37750..38010,38010..38621) Clostridium clariflavum DSM 19732 11562299 YP_005044713.1 CDS Clocl_0031 NC_016627.1 38742 39005 D PFAM: Protein of unknown function (DUF1021); hypothetical protein 38742..39005 Clostridium clariflavum DSM 19732 11562300 YP_005044714.1 CDS Clocl_0032 NC_016627.1 38925 39122 R hypothetical protein complement(38925..39122) Clostridium clariflavum DSM 19732 11562301 YP_005044715.1 CDS Clocl_0033 NC_016627.1 39285 40856 D PFAM: LysM domain; LysM repeat-containing protein 39285..40856 Clostridium clariflavum DSM 19732 11562302 YP_005044716.1 CDS Clocl_0034 NC_016627.1 41300 42169 D PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 41300..42169 Clostridium clariflavum DSM 19732 11562303 YP_005044717.1 CDS Clocl_0035 NC_016627.1 42177 42854 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 42177..42854 Clostridium clariflavum DSM 19732 11562304 YP_005044718.1 CDS Clocl_0036 NC_016627.1 42955 43161 R PFAM: Heavy-metal-associated domain; copper chaperone complement(42955..43161) Clostridium clariflavum DSM 19732 11562305 YP_005044719.1 CDS Clocl_0037 NC_016627.1 43580 44701 D PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 43580..44701 Clostridium clariflavum DSM 19732 11562306 YP_005044720.1 CDS Clocl_0038 NC_016627.1 44841 46469 D PFAM: ATPase family associated with various cellular activities (AAA); AAA ATPase 44841..46469 Clostridium clariflavum DSM 19732 11562307 YP_005044721.1 CDS Clocl_0039 NC_016627.1 46575 47354 D phage shock protein A (IM30), suppresses sigma54-dependent transcription 46575..47354 Clostridium clariflavum DSM 19732 11562308 YP_005044722.1 CDS Clocl_0040 NC_016627.1 47492 48271 D hypothetical protein 47492..48271 Clostridium clariflavum DSM 19732 11562309 YP_005044723.1 CDS Clocl_0041 NC_016627.1 48412 50004 D PFAM: Protein of unknown function (DUF342); manually curated; putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon 48412..50004 Clostridium clariflavum DSM 19732 11562310 YP_005044724.1 CDS Clocl_0042 NC_016627.1 50047 51180 D PFAM: Calcineurin-like phosphoesterase; DNA repair exonuclease 50047..51180 Clostridium clariflavum DSM 19732 11562311 YP_005044725.1 CDS Clocl_0043 NC_016627.1 51207 53831 D manually curated; hypothetical protein 51207..53831 Clostridium clariflavum DSM 19732 11562312 YP_005044726.1 CDS Clocl_0044 NC_016627.1 53902 54855 D PFAM: NlpC/P60 family; Bacterial SH3 domain; cell wall-associated hydrolase, invasion-associated protein 53902..54855 Clostridium clariflavum DSM 19732 11562313 YP_005044727.1 CDS Clocl_0045 NC_016627.1 55027 56265 R PFAM: Glycosyl hydrolase family 10; beta-1,4-xylanase complement(55027..56265) Clostridium clariflavum DSM 19732 11562314 YP_005044728.1 CDS Clocl_0046 NC_016627.1 56572 58227 R hypothetical protein complement(56572..58227) Clostridium clariflavum DSM 19732 11562315 YP_005044729.1 CDS Clocl_0047 NC_016627.1 58217 59119 R manually curated; hypothetical protein complement(58217..59119) Clostridium clariflavum DSM 19732 11562316 YP_005044730.1 CDS Clocl_0048 NC_016627.1 59116 60105 R PFAM: von Willebrand factor type A domain; manually curated; Mg-chelatase subunit ChlD complement(59116..60105) Clostridium clariflavum DSM 19732 11562317 YP_005044731.1 CDS Clocl_0049 NC_016627.1 60138 61103 R PFAM: von Willebrand factor type A domain; TIGRFAM: N-terminal double-transmembrane domain; hypothetical protein complement(60138..61103) Clostridium clariflavum DSM 19732 11562318 YP_005044732.1 CDS Clocl_0050 NC_016627.1 61100 61894 R hypothetical protein complement(61100..61894) Clostridium clariflavum DSM 19732 11562319 YP_005044733.1 CDS Clocl_0051 NC_016627.1 61891 62712 R PFAM: Protein of unknown function DUF58; hypothetical protein complement(61891..62712) Clostridium clariflavum DSM 19732 11562320 YP_005044734.1 CDS Clocl_0052 NC_016627.1 62735 63685 R PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase complement(62735..63685) Clostridium clariflavum DSM 19732 11562321 YP_005044735.1 CDS Clocl_0053 NC_016627.1 64112 65221 R PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase complement(64112..65221) Clostridium clariflavum DSM 19732 11562322 YP_005044736.1 CDS Clocl_0054 NC_016627.1 65703 66398 D PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme; spore cortex-lytic protein 65703..66398 Clostridium clariflavum DSM 19732 11562323 YP_005044737.1 CDS Clocl_0055 NC_016627.1 66413 67804 D TIGRFAM: germination protein YpeB; germination protein YpeB 66413..67804 Clostridium clariflavum DSM 19732 11562324 YP_005044738.1 CDS Clocl_0056 NC_016627.1 68106 69185 D PFAM: CAAX amino terminal protease family; putative metal-dependent membrane protease 68106..69185 Clostridium clariflavum DSM 19732 11562325 YP_005044739.1 CDS Clocl_0057 NC_016627.1 69450 70493 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(69450..70493) Clostridium clariflavum DSM 19732 11562326 YP_005044740.1 CDS Clocl_0058 NC_016627.1 70561 71541 R PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain; DnaD-like protein complement(70561..71541) Clostridium clariflavum DSM 19732 11562327 YP_005044741.1 CDS Clocl_0060 NC_016627.1 71944 73467 R hypothetical protein complement(71944..73467) Clostridium clariflavum DSM 19732 11560053 YP_005044742.1 CDS Clocl_0061 NC_016627.1 73660 74460 D PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor component 73660..74460 Clostridium clariflavum DSM 19732 11560054 YP_005044743.1 CDS Clocl_0062 NC_016627.1 74512 75291 D PFAM: OmpA family; flagellar motor protein 74512..75291 Clostridium clariflavum DSM 19732 11560055 YP_005044744.1 CDS Clocl_0063 NC_016627.1 75429 76412 D PFAM: Protein of unknown function (DUF1385); putative metal-dependent enzyme 75429..76412 Clostridium clariflavum DSM 19732 11560056 YP_005044745.1 CDS Clocl_0064 NC_016627.1 76455 77300 D PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase 76455..77300 Clostridium clariflavum DSM 19732 11560057 YP_005044746.1 CDS Clocl_0065 NC_016627.1 77278 78351 R PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI; sporulation integral membrane protein YtvI complement(77278..78351) Clostridium clariflavum DSM 19732 11560058 YP_005044747.1 CDS Clocl_0066 NC_016627.1 78961 80280 D PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 78961..80280 Clostridium clariflavum DSM 19732 11560059 YP_005044748.1 CDS Clocl_0067 NC_016627.1 80282 81271 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 80282..81271 Clostridium clariflavum DSM 19732 11560060 YP_005044749.1 CDS Clocl_0068 NC_016627.1 81264 81863 D PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 81264..81863 Clostridium clariflavum DSM 19732 11560061 YP_005044750.1 CDS Clocl_0069 NC_016627.1 81860 82525 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; RnfABCDGE type electron transport complex subunit E 81860..82525 Clostridium clariflavum DSM 19732 11560062 YP_005044751.1 CDS Clocl_0070 NC_016627.1 82525 83106 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 82525..83106 Clostridium clariflavum DSM 19732 11560063 YP_005044752.1 CDS Clocl_0071 NC_016627.1 83145 83930 D PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; RnfABCDGE type electron transport complex subunit B 83145..83930 Clostridium clariflavum DSM 19732 11560064 YP_005044753.1 CDS Clocl_0072 NC_016627.1 84193 84465 R hypothetical protein complement(84193..84465) Clostridium clariflavum DSM 19732 11560065 YP_005044754.1 CDS Clocl_0073 NC_016627.1 84705 85217 D PFAM: Shikimate kinase; shikimate kinase 84705..85217 Clostridium clariflavum DSM 19732 11560066 YP_005044755.1 CDS Clocl_0074 NC_016627.1 85513 86496 D PFAM: Glycosyl hydrolases family 43; beta-xylosidase 85513..86496 Clostridium clariflavum DSM 19732 11560067 YP_005044756.1 CDS Clocl_0075 NC_016627.1 86589 87704 R PFAM: Thermophilic metalloprotease (M29); leucyl aminopeptidase complement(86589..87704) Clostridium clariflavum DSM 19732 11560068 YP_005044757.1 CDS Clocl_0076 NC_016627.1 87701 89509 R PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F; oligoendopeptidase F complement(87701..89509) Clostridium clariflavum DSM 19732 11560069 YP_005044758.1 CDS Clocl_0077 NC_016627.1 89528 89887 R PFAM: MazG nucleotide pyrophosphohydrolase domain; putative pyrophosphatase complement(89528..89887) Clostridium clariflavum DSM 19732 11560070 YP_005044759.1 CDS Clocl_0078 NC_016627.1 90174 93323 R PFAM: S-layer homology domain; Fibronectin type III domain; fibronectin type 3 domain-containing protein complement(90174..93323) Clostridium clariflavum DSM 19732 11560071 YP_005044760.1 CDS Clocl_0079 NC_016627.1 93445 94839 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric; NADPH-dependent glutamate synthase, homotetrameric complement(93445..94839) Clostridium clariflavum DSM 19732 11560072 YP_005044761.1 CDS Clocl_0080 NC_016627.1 94832 95677 R PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; 2-polyprenylphenol 6-hydroxylase complement(94832..95677) Clostridium clariflavum DSM 19732 11560073 YP_005044762.1 CDS Clocl_0081 NC_016627.1 96036 97307 D PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18; putative glycosyl hydrolase 96036..97307 Clostridium clariflavum DSM 19732 11560074 YP_005044763.1 CDS Clocl_0082 NC_016627.1 98029 99369 D PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase/leucine dehydrogenase 98029..99369 Clostridium clariflavum DSM 19732 11560075 YP_005044764.1 CDS Clocl_0083 NC_016627.1 99663 99821 D hypothetical protein 99663..99821 Clostridium clariflavum DSM 19732 11560076 YP_005044765.1 CDS Clocl_0085 NC_016627.1 100144 100608 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytosine/adenosine deaminase 100144..100608 Clostridium clariflavum DSM 19732 11560078 YP_005044766.1 CDS Clocl_0087 NC_016627.1 101003 102325 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; Na+-driven multidrug efflux pump 101003..102325 Clostridium clariflavum DSM 19732 11560080 YP_005044767.1 CDS Clocl_0088 NC_016627.1 102565 104274 D PFAM: Alpha-L-arabinofuranosidase B (ABFB); Dockerin type I repeat; Glycosyl hydrolases family 43; beta-xylosidase 102565..104274 Clostridium clariflavum DSM 19732 11560081 YP_005044768.1 CDS Clocl_0089 NC_016627.1 104844 105296 D hypothetical protein 104844..105296 Clostridium clariflavum DSM 19732 11560082 YP_005044769.1 CDS Clocl_0090 NC_016627.1 105798 106322 D hypothetical protein 105798..106322 Clostridium clariflavum DSM 19732 11560083 YP_005044770.1 CDS Clocl_0091 NC_016627.1 106707 107447 D hypothetical protein 106707..107447 Clostridium clariflavum DSM 19732 11560084 YP_005044771.1 CDS Clocl_0092 NC_016627.1 107536 108819 D PFAM: Protein of unknown function (DUF2791); hypothetical protein 107536..108819 Clostridium clariflavum DSM 19732 11560085 YP_005044772.1 CDS Clocl_0093 NC_016627.1 108857 109552 D PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; looped-hinge helix DNA binding domain, AbrB family 108857..109552 Clostridium clariflavum DSM 19732 11560086 YP_005044773.1 CDS Clocl_0095 NC_016627.1 110112 110588 D hypothetical protein 110112..110588 Clostridium clariflavum DSM 19732 11560088 YP_005044774.1 CDS Clocl_0096 NC_016627.1 110642 111118 D hypothetical protein 110642..111118 Clostridium clariflavum DSM 19732 11560089 YP_005044775.1 CDS Clocl_0097 NC_016627.1 111268 111780 D hypothetical protein 111268..111780 Clostridium clariflavum DSM 19732 11560090 YP_005044776.1 CDS Clocl_0098 NC_016627.1 111997 112398 D hypothetical protein 111997..112398 Clostridium clariflavum DSM 19732 11560091 YP_005044777.1 CDS Clocl_0101 NC_016627.1 113822 114010 D hypothetical protein 113822..114010 Clostridium clariflavum DSM 19732 11560094 YP_005044778.1 CDS Clocl_0102 NC_016627.1 114007 114147 D hypothetical protein 114007..114147 Clostridium clariflavum DSM 19732 11560095 YP_005044779.1 CDS Clocl_0103 NC_016627.1 114352 114810 D hypothetical protein 114352..114810 Clostridium clariflavum DSM 19732 11560096 YP_005044780.1 CDS Clocl_0104 NC_016627.1 114927 115289 D hypothetical protein 114927..115289 Clostridium clariflavum DSM 19732 11560097 YP_005044781.1 CDS Clocl_0105 NC_016627.1 115365 115616 D hypothetical protein 115365..115616 Clostridium clariflavum DSM 19732 11560098 YP_005044782.1 CDS Clocl_0106 NC_016627.1 115997 116401 D PFAM: Protein of unknown function (DUF3592); hypothetical protein 115997..116401 Clostridium clariflavum DSM 19732 11560099 YP_005044783.1 CDS Clocl_0107 NC_016627.1 116538 117194 R PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D; H(+)-transporting ATP synthase, vacuolar type, subunit D complement(116538..117194) Clostridium clariflavum DSM 19732 11560100 YP_005044784.1 CDS Clocl_0108 NC_016627.1 117402 118784 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase archaeal, B subunit; archaeal/vacuolar-type H+-ATPase subunit B complement(117402..118784) Clostridium clariflavum DSM 19732 11560101 YP_005044785.1 CDS Clocl_0109 NC_016627.1 118777 120555 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase archaeal, A subunit; ATP synthase, A subunit complement(118777..120555) Clostridium clariflavum DSM 19732 11560102 YP_005044786.1 CDS Clocl_0110 NC_016627.1 120609 120929 R PFAM: ATP synthase (F/14-kDa) subunit; archaeal/vacuolar-type H+-ATPase subunit F complement(120609..120929) Clostridium clariflavum DSM 19732 11560103 YP_005044787.1 CDS Clocl_0111 NC_016627.1 120922 121941 R PFAM: ATP synthase (C/AC39) subunit; archaeal/vacuolar-type H+-ATPase subunit C complement(120922..121941) Clostridium clariflavum DSM 19732 11560104 YP_005044788.1 CDS Clocl_0112 NC_016627.1 121990 122586 R PFAM: ATP synthase (E/31 kDa) subunit; archaeal/vacuolar-type H+-ATPase subunit E complement(121990..122586) Clostridium clariflavum DSM 19732 11560105 YP_005044789.1 CDS Clocl_0113 NC_016627.1 122605 123096 R PFAM: ATP synthase subunit C; ATP synthase subunit C complement(122605..123096) Clostridium clariflavum DSM 19732 11560106 YP_005044790.1 CDS Clocl_0114 NC_016627.1 123098 125062 R PFAM: V-type ATPase 116kDa subunit family; archaeal/vacuolar-type H+-ATPase subunit I complement(123098..125062) Clostridium clariflavum DSM 19732 11560107 YP_005044791.1 CDS Clocl_0115 NC_016627.1 125049 125375 R hypothetical protein complement(125049..125375) Clostridium clariflavum DSM 19732 11560108 YP_005044792.1 CDS Clocl_0116 NC_016627.1 125851 126192 R hypothetical protein complement(125851..126192) Clostridium clariflavum DSM 19732 11560109 YP_005044793.1 CDS Clocl_0117 NC_016627.1 126460 129066 D PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 126460..129066 Clostridium clariflavum DSM 19732 11560110 YP_005044794.1 CDS Clocl_0118 NC_016627.1 129215 130306 R PFAM: Domain of unknown function DUF20; manually curated; putative permease complement(129215..130306) Clostridium clariflavum DSM 19732 11560111 YP_005044795.1 CDS Clocl_0119 NC_016627.1 130556 131824 D PFAM: KWG Leptospira; KWG repeat-containing protein 130556..131824 Clostridium clariflavum DSM 19732 11560112 YP_005044796.1 CDS Clocl_0120 NC_016627.1 131987 132820 D PFAM: Prephenate dehydratase; ACT domain; prephenate dehydratase 131987..132820 Clostridium clariflavum DSM 19732 11560113 YP_005044797.1 CDS Clocl_0121 NC_016627.1 133151 133492 D hypothetical protein 133151..133492 Clostridium clariflavum DSM 19732 11560114 YP_005044798.1 CDS Clocl_0122 NC_016627.1 133524 135533 D PFAM: DHH family; DHHA1 domain; putative signaling protein consisting of a modified GGDEF domain and a DHH domain protein 133524..135533 Clostridium clariflavum DSM 19732 11560115 YP_005044799.1 CDS Clocl_0123 NC_016627.1 135565 136011 D PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; manually curated; 50S ribosomal protein L9P 135565..136011 Clostridium clariflavum DSM 19732 11560116 YP_005044800.1 CDS Clocl_0124 NC_016627.1 136023 137363 D PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase 136023..137363 Clostridium clariflavum DSM 19732 11560117 YP_005044801.1 CDS Clocl_0125 NC_016627.1 137412 138818 D PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; manually curated; tRNA(Ile)-lysidine synthetase 137412..138818 Clostridium clariflavum DSM 19732 11560118 YP_005044802.1 CDS Clocl_0126 NC_016627.1 138834 139382 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 138834..139382 Clostridium clariflavum DSM 19732 11560119 YP_005044803.1 CDS Clocl_0127 NC_016627.1 139585 141396 D PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; ATP-dependent metalloprotease FtsH 139585..141396 Clostridium clariflavum DSM 19732 11560120 YP_005044804.1 CDS Clocl_0128 NC_016627.1 141670 142071 D PFAM: Thioesterase superfamily; putative thioesterase 141670..142071 Clostridium clariflavum DSM 19732 11560121 YP_005044805.1 CDS Clocl_0129 NC_016627.1 142095 142286 D hypothetical protein 142095..142286 Clostridium clariflavum DSM 19732 11560122 YP_005044806.1 CDS Clocl_0130 NC_016627.1 142719 143912 D PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 142719..143912 Clostridium clariflavum DSM 19732 11560123 YP_005044807.1 CDS Clocl_0131 NC_016627.1 144176 146719 D PFAM: Predicted membrane protein (DUF2339); manually curated; hypothetical protein 144176..146719 Clostridium clariflavum DSM 19732 11560124 YP_005044808.1 CDS Clocl_0132 NC_016627.1 146830 147225 D hypothetical protein 146830..147225 Clostridium clariflavum DSM 19732 11560125 YP_005044809.1 CDS Clocl_0133 NC_016627.1 147303 147743 D hypothetical protein 147303..147743 Clostridium clariflavum DSM 19732 11560126 YP_005044810.1 CDS Clocl_0134 NC_016627.1 147989 150202 D PFAM: Putative ATPase (DUF699); TIGRFAM: helicase, putative, RecD/TraA family; helicase, putative, RecD/TraA family 147989..150202 Clostridium clariflavum DSM 19732 11560127 YP_005044811.1 CDS Clocl_0135 NC_016627.1 150284 150457 D hypothetical protein 150284..150457 Clostridium clariflavum DSM 19732 11560128 YP_005044812.1 CDS Clocl_0137 NC_016627.1 151335 152993 D PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III, subunit gamma/tau 151335..152993 Clostridium clariflavum DSM 19732 11560130 YP_005044813.1 CDS Clocl_0138 NC_016627.1 153197 153538 D PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; DNA-binding protein, YbaB/EbfC family 153197..153538 Clostridium clariflavum DSM 19732 11560131 YP_005044814.1 CDS Clocl_0139 NC_016627.1 153556 154155 D PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; DNA replication and repair protein RecR 153556..154155 Clostridium clariflavum DSM 19732 11560132 YP_005044815.1 CDS Clocl_0140 NC_016627.1 155467 155955 D PFAM: Pyridoxamine 5'-phosphate oxidase; putative flavin-nucleotide-binding protein 155467..155955 Clostridium clariflavum DSM 19732 11560133 YP_005044816.1 CDS Clocl_0142 NC_016627.1 156931 157599 D PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 156931..157599 Clostridium clariflavum DSM 19732 11560135 YP_005044817.1 CDS Clocl_0144 NC_016627.1 157800 158441 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 157800..158441 Clostridium clariflavum DSM 19732 11560137 YP_005044818.1 CDS Clocl_0146 NC_016627.1 159323 160135 D hypothetical protein 159323..160135 Clostridium clariflavum DSM 19732 11560139 YP_005044819.1 CDS Clocl_0147 NC_016627.1 160271 160858 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 160271..160858 Clostridium clariflavum DSM 19732 11560140 YP_005044820.1 CDS Clocl_0148 NC_016627.1 160858 161565 D PFAM: LysE type translocator; putative threonine efflux protein 160858..161565 Clostridium clariflavum DSM 19732 11560141 YP_005044821.1 CDS Clocl_0149 NC_016627.1 161660 162394 D PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 161660..162394 Clostridium clariflavum DSM 19732 11560142 YP_005044822.1 CDS Clocl_0150 NC_016627.1 162429 163265 D PFAM: Nucleotidyltransferase domain; putative nucleotidyltransferase 162429..163265 Clostridium clariflavum DSM 19732 11560143 YP_005044823.1 CDS Clocl_0151 NC_016627.1 163333 163719 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase 163333..163719 Clostridium clariflavum DSM 19732 11560144 YP_005044824.1 CDS Clocl_0152 NC_016627.1 163782 164138 D hypothetical protein 163782..164138 Clostridium clariflavum DSM 19732 11560145 YP_005044825.1 CDS Clocl_0153 NC_016627.1 164187 164792 D hypothetical protein 164187..164792 Clostridium clariflavum DSM 19732 11560146 YP_005044826.1 CDS Clocl_0154 NC_016627.1 165204 165602 D PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 165204..165602 Clostridium clariflavum DSM 19732 11560147 YP_005044827.1 CDS Clocl_0155 NC_016627.1 165736 166791 D PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein 165736..166791 Clostridium clariflavum DSM 19732 11560148 YP_005044828.1 CDS Clocl_0156 NC_016627.1 166816 167217 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase 166816..167217 Clostridium clariflavum DSM 19732 11560149 YP_005044829.1 CDS Clocl_0157 NC_016627.1 167325 168341 D PFAM: Predicted permease; manually curated; putative permease 167325..168341 Clostridium clariflavum DSM 19732 11560150 YP_005044830.1 CDS Clocl_0158 NC_016627.1 168419 168904 D PFAM: Predicted permease; putative permease 168419..168904 Clostridium clariflavum DSM 19732 11560151 YP_005044831.1 CDS Clocl_0159 NC_016627.1 168901 169431 D PFAM: Predicted permease; putative permease 168901..169431 Clostridium clariflavum DSM 19732 11560152 YP_005044832.1 CDS Clocl_0160 NC_016627.1 169455 169691 D hypothetical protein 169455..169691 Clostridium clariflavum DSM 19732 11560153 YP_005044833.1 CDS Clocl_0162 NC_016627.1 169949 170176 D TIGRFAM: small redox-active disulfide protein 2; small redox-active disulfide protein 2 169949..170176 Clostridium clariflavum DSM 19732 11560155 YP_005044834.1 CDS Clocl_0164 NC_016627.1 171003 171563 D PFAM: Protein of unknown function (DUF2703); hypothetical protein 171003..171563 Clostridium clariflavum DSM 19732 11560157 YP_005044835.1 CDS Clocl_0165 NC_016627.1 171774 172607 D PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; chromosome partitioning ATPase 171774..172607 Clostridium clariflavum DSM 19732 11560158 YP_005044836.1 CDS Clocl_0166 NC_016627.1 172631 173026 D PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 172631..173026 Clostridium clariflavum DSM 19732 11560159 YP_005044837.1 CDS Clocl_0167 NC_016627.1 173028 173864 D PFAM: 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily 173028..173864 Clostridium clariflavum DSM 19732 11560160 YP_005044838.1 CDS Clocl_0168 NC_016627.1 173849 174709 D PFAM: 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily 173849..174709 Clostridium clariflavum DSM 19732 11560161 YP_005044839.1 CDS Clocl_0169 NC_016627.1 174729 175085 D PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 174729..175085 Clostridium clariflavum DSM 19732 11560162 YP_005044840.1 CDS Clocl_0170 NC_016627.1 175103 175588 D PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 175103..175588 Clostridium clariflavum DSM 19732 11560163 YP_005044841.1 CDS Clocl_0171 NC_016627.1 175573 176007 D PFAM: Protein of unknown function DUF134; putative DNA-binding protein 175573..176007 Clostridium clariflavum DSM 19732 11560164 YP_005044842.1 CDS Clocl_0172 NC_016627.1 176102 176656 R PFAM: Protein of unknown function (DUF820); hypothetical protein complement(176102..176656) Clostridium clariflavum DSM 19732 11560165 YP_005044843.1 CDS Clocl_0173 NC_016627.1 176766 177170 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(176766..177170) Clostridium clariflavum DSM 19732 11560166 YP_005044844.1 CDS Clocl_0174 NC_016627.1 177701 178609 D PFAM: StbA protein; actin-like ATPase involved in cell division 177701..178609 Clostridium clariflavum DSM 19732 11560167 YP_005044845.1 CDS Clocl_0175 NC_016627.1 178614 178904 D hypothetical protein 178614..178904 Clostridium clariflavum DSM 19732 11560168 YP_005044846.1 CDS Clocl_0176 NC_016627.1 179655 179942 R hypothetical protein complement(179655..179942) Clostridium clariflavum DSM 19732 11560169 YP_005044847.1 CDS Clocl_0177 NC_016627.1 180268 181092 R PFAM: Sigma-70, region 4; sigma-70 family RNA polymerase sigma factor complement(180268..181092) Clostridium clariflavum DSM 19732 11560170 YP_005044848.1 CDS Clocl_0178 NC_016627.1 181237 182796 D manually curated; hypothetical protein 181237..182796 Clostridium clariflavum DSM 19732 11560171 YP_005044849.1 CDS Clocl_0179 NC_016627.1 183289 183576 D PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 183289..183576 Clostridium clariflavum DSM 19732 11560172 YP_005044850.1 CDS Clocl_0180 NC_016627.1 183831 184076 R PFAM: Helix-turn-helix; Helix-turn-helix protein complement(183831..184076) Clostridium clariflavum DSM 19732 11560173 YP_005044851.1 CDS Clocl_0181 NC_016627.1 184183 185073 D PFAM: Spo0E like sporulation regulatory protein; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 184183..185073 Clostridium clariflavum DSM 19732 11560174 YP_005044852.1 CDS Clocl_0183 NC_016627.1 185698 186600 D hypothetical protein 185698..186600 Clostridium clariflavum DSM 19732 11560176 YP_005044853.1 CDS Clocl_0184 NC_016627.1 186801 187979 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 186801..187979 Clostridium clariflavum DSM 19732 11560177 YP_005044854.1 CDS Clocl_0185 NC_016627.1 188219 189286 D hypothetical protein 188219..189286 Clostridium clariflavum DSM 19732 11560178 YP_005044855.1 CDS Clocl_0186 NC_016627.1 189748 190599 D PFAM: HNH endonuclease; HNH endonuclease 189748..190599 Clostridium clariflavum DSM 19732 11560179 YP_005044856.1 CDS Clocl_0187 NC_016627.1 190851 191945 D manually curated; hypothetical protein 190851..191945 Clostridium clariflavum DSM 19732 11560180 YP_005044857.1 CDS Clocl_0188 NC_016627.1 191956 192729 D PFAM: Radical SAM superfamily; DNA repair photolyase 191956..192729 Clostridium clariflavum DSM 19732 11560181 YP_005044858.1 CDS Clocl_0189 NC_016627.1 192950 194968 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system methyltransferase subunit 192950..194968 Clostridium clariflavum DSM 19732 11560182 YP_005044859.1 CDS Clocl_0190 NC_016627.1 194965 196257 D PFAM: Type I restriction modification DNA specificity domain; manually curated; restriction endonuclease S subunit 194965..196257 Clostridium clariflavum DSM 19732 11560183 YP_005044860.1 CDS Clocl_0191 NC_016627.1 196282 199266 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; helicase, type I site-specific restriction-modification system restriction subunit 196282..199266 Clostridium clariflavum DSM 19732 11560184 YP_005044861.1 CDS Clocl_0192 NC_016627.1 199290 200168 D PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; ADP-ribosylglycohydrolase 199290..200168 Clostridium clariflavum DSM 19732 11560185 YP_005044862.1 CDS Clocl_0193 NC_016627.1 200281 201069 R hypothetical protein complement(200281..201069) Clostridium clariflavum DSM 19732 11560186 YP_005044863.1 CDS Clocl_0194 NC_016627.1 201165 201701 R hypothetical protein complement(201165..201701) Clostridium clariflavum DSM 19732 11560187 YP_005044864.1 CDS Clocl_0195 NC_016627.1 201839 202381 R hypothetical protein complement(201839..202381) Clostridium clariflavum DSM 19732 11560188 YP_005044865.1 CDS Clocl_0196 NC_016627.1 202771 203454 D hypothetical protein 202771..203454 Clostridium clariflavum DSM 19732 11560189 YP_005044866.1 CDS Clocl_0197 NC_016627.1 203447 205726 D PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; manually curated; DNA/RNA helicase 203447..205726 Clostridium clariflavum DSM 19732 11560190 YP_005044867.1 CDS Clocl_0198 NC_016627.1 205982 206704 D PFAM: Protein of unknown function (DUF1444); hypothetical protein 205982..206704 Clostridium clariflavum DSM 19732 11560191 YP_005044868.1 CDS Clocl_0199 NC_016627.1 207204 207500 R hypothetical protein complement(207204..207500) Clostridium clariflavum DSM 19732 11560192 YP_005044869.1 CDS Clocl_0200 NC_016627.1 207811 208671 D hypothetical protein 207811..208671 Clostridium clariflavum DSM 19732 11560193 YP_005044870.1 CDS Clocl_0201 NC_016627.1 208929 209126 D hypothetical protein 208929..209126 Clostridium clariflavum DSM 19732 11560194 YP_005044871.1 CDS Clocl_0202 NC_016627.1 209234 209323 D hypothetical protein 209234..209323 Clostridium clariflavum DSM 19732 11560195 YP_005044872.1 CDS Clocl_0203 NC_016627.1 209397 210287 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; site-specific recombinase XerD complement(209397..210287) Clostridium clariflavum DSM 19732 11560196 YP_005044873.1 CDS Clocl_0204 NC_016627.1 210647 212623 R hypothetical protein complement(210647..212623) Clostridium clariflavum DSM 19732 11560197 YP_005044874.1 CDS Clocl_0205 NC_016627.1 213296 213625 D hypothetical protein 213296..213625 Clostridium clariflavum DSM 19732 11560198 YP_005044875.1 CDS Clocl_0207 NC_016627.1 214218 214679 D hypothetical protein 214218..214679 Clostridium clariflavum DSM 19732 11560200 YP_005044876.1 CDS Clocl_0208 NC_016627.1 214728 214913 R hypothetical protein complement(214728..214913) Clostridium clariflavum DSM 19732 11560201 YP_005044877.1 CDS Clocl_0209 NC_016627.1 215204 216058 D PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal; TnsA endonuclease 215204..216058 Clostridium clariflavum DSM 19732 11560202 YP_005044878.1 CDS Clocl_0210 NC_016627.1 216045 218180 D PFAM: Mu transposase, C-terminal; Integrase core domain; Mu transposase/integrase 216045..218180 Clostridium clariflavum DSM 19732 11560203 YP_005044879.1 CDS Clocl_0211 NC_016627.1 218173 219831 D PFAM: Bacterial TniB protein; TniB protein 218173..219831 Clostridium clariflavum DSM 19732 11560204 YP_005044880.1 CDS Clocl_0212 NC_016627.1 219837 221723 D hypothetical protein 219837..221723 Clostridium clariflavum DSM 19732 11560205 YP_005044881.1 CDS Clocl_0214 NC_016627.1 226403 226711 D hypothetical protein 226403..226711 Clostridium clariflavum DSM 19732 11560207 YP_005044882.1 CDS Clocl_0215 NC_016627.1 226825 227181 D hypothetical protein 226825..227181 Clostridium clariflavum DSM 19732 11560208 YP_005044883.1 CDS Clocl_0216 NC_016627.1 227215 227799 D hypothetical protein 227215..227799 Clostridium clariflavum DSM 19732 11560209 YP_005044884.1 CDS Clocl_0217 NC_016627.1 227853 228530 R PFAM: Iron dependent repressor, N-terminal DNA binding domain; Cyclic nucleotide-binding domain; cAMP-binding protein complement(227853..228530) Clostridium clariflavum DSM 19732 11560210 YP_005044885.1 CDS Clocl_0218 NC_016627.1 228626 228955 D PFAM: Cupin domain; cupin domain-containing protein 228626..228955 Clostridium clariflavum DSM 19732 11560211 YP_005044886.1 CDS Clocl_0219 NC_016627.1 228962 229444 D PFAM: Predicted permease; putative permease 228962..229444 Clostridium clariflavum DSM 19732 11560212 YP_005044887.1 CDS Clocl_0220 NC_016627.1 229446 230165 D PFAM: Predicted permease; putative permease 229446..230165 Clostridium clariflavum DSM 19732 11560213 YP_005044888.1 CDS Clocl_0222 NC_016627.1 230684 231331 D PFAM: LysE type translocator; putative threonine efflux protein 230684..231331 Clostridium clariflavum DSM 19732 11560215 YP_005044889.1 CDS Clocl_0223 NC_016627.1 231405 231536 D hypothetical protein 231405..231536 Clostridium clariflavum DSM 19732 11560216 YP_005044890.1 CDS Clocl_0224 NC_016627.1 231523 232452 D PFAM: HD domain; HD-GYP domain-containing protein 231523..232452 Clostridium clariflavum DSM 19732 11560217 YP_005044891.1 CDS Clocl_0225 NC_016627.1 232561 232950 D PFAM: Protein of unknown function (DUF1232); hypothetical protein 232561..232950 Clostridium clariflavum DSM 19732 11560218 YP_005044892.1 CDS Clocl_0227 NC_016627.1 233273 233674 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase, glutathione/glutaredoxin type; protein-tyrosine-phosphatase 233273..233674 Clostridium clariflavum DSM 19732 11560220 YP_005044893.1 CDS Clocl_0228 NC_016627.1 233900 234241 D PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 233900..234241 Clostridium clariflavum DSM 19732 11560221 YP_005044894.1 CDS Clocl_0229 NC_016627.1 234256 235272 D PFAM: Predicted permease; putative permease 234256..235272 Clostridium clariflavum DSM 19732 11560222 YP_005044895.1 CDS Clocl_0230 NC_016627.1 235396 235623 D TIGRFAM: small redox-active disulfide protein 2; small redox-active disulfide protein 2 235396..235623 Clostridium clariflavum DSM 19732 11560223 YP_005044896.1 CDS Clocl_0231 NC_016627.1 235641 236204 D PFAM: Protein of unknown function (DUF2703); hypothetical protein 235641..236204 Clostridium clariflavum DSM 19732 11560224 YP_005044897.1 CDS Clocl_0232 NC_016627.1 236613 237758 D PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain 236613..237758 Clostridium clariflavum DSM 19732 11560225 YP_005044898.1 CDS Clocl_0233 NC_016627.1 237896 238210 D hypothetical protein 237896..238210 Clostridium clariflavum DSM 19732 11560226 YP_005044899.1 CDS Clocl_0234 NC_016627.1 238285 239025 D PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 238285..239025 Clostridium clariflavum DSM 19732 11560227 YP_005044900.1 CDS Clocl_0235 NC_016627.1 239057 239890 D PFAM: Nucleotidyltransferase domain; putative nucleotidyltransferase 239057..239890 Clostridium clariflavum DSM 19732 11560228 YP_005044901.1 CDS Clocl_0236 NC_016627.1 239958 240374 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase 239958..240374 Clostridium clariflavum DSM 19732 11560229 YP_005044902.1 CDS Clocl_0237 NC_016627.1 240407 240763 D hypothetical protein 240407..240763 Clostridium clariflavum DSM 19732 11560230 YP_005044903.1 CDS Clocl_0238 NC_016627.1 241124 241675 R PFAM: Protein of unknown function (DUF820); hypothetical protein complement(241124..241675) Clostridium clariflavum DSM 19732 11560231 YP_005044904.1 CDS Clocl_0239 NC_016627.1 241845 242204 D hypothetical protein 241845..242204 Clostridium clariflavum DSM 19732 11560232 YP_005044905.1 CDS Clocl_0240 NC_016627.1 242307 242693 R PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; S23 ribosomal protein complement(242307..242693) Clostridium clariflavum DSM 19732 11560233 YP_005044906.1 CDS Clocl_0241 NC_016627.1 243216 244124 D PFAM: StbA protein; actin-like ATPase involved in cell division 243216..244124 Clostridium clariflavum DSM 19732 11560234 YP_005044907.1 CDS Clocl_0242 NC_016627.1 244129 244410 D hypothetical protein 244129..244410 Clostridium clariflavum DSM 19732 11560235 YP_005044908.1 CDS Clocl_0243 NC_016627.1 244601 245419 D hypothetical protein 244601..245419 Clostridium clariflavum DSM 19732 11560236 YP_005044909.1 CDS Clocl_0244 NC_016627.1 245989 246276 R hypothetical protein complement(245989..246276) Clostridium clariflavum DSM 19732 11560237 YP_005044910.1 CDS Clocl_0245 NC_016627.1 246362 248329 R PFAM: CHC2 zinc finger; DNA primase complement(246362..248329) Clostridium clariflavum DSM 19732 11560238 YP_005044911.1 CDS Clocl_0246 NC_016627.1 248746 249030 D PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 248746..249030 Clostridium clariflavum DSM 19732 11560239 YP_005044912.1 CDS Clocl_0247 NC_016627.1 249237 250133 D PFAM: Spo0E like sporulation regulatory protein; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 249237..250133 Clostridium clariflavum DSM 19732 11560240 YP_005044913.1 CDS Clocl_0248 NC_016627.1 250383 251450 D hypothetical protein 250383..251450 Clostridium clariflavum DSM 19732 11560241 YP_005044914.1 CDS Clocl_0249 NC_016627.1 252203 252727 D hypothetical protein 252203..252727 Clostridium clariflavum DSM 19732 11560242 YP_005044915.1 CDS Clocl_0250 NC_016627.1 253005 253610 D PFAM: Putative inner membrane protein (DUF1819); hypothetical protein 253005..253610 Clostridium clariflavum DSM 19732 11560243 YP_005044916.1 CDS Clocl_0251 NC_016627.1 253611 254195 D PFAM: Domain of unknown function (DUF1788); hypothetical protein 253611..254195 Clostridium clariflavum DSM 19732 11560244 YP_005044917.1 CDS Clocl_0252 NC_016627.1 254231 257791 D hypothetical protein 254231..257791 Clostridium clariflavum DSM 19732 11560245 YP_005044918.1 CDS Clocl_0253 NC_016627.1 257805 261509 D PFAM: N-6 DNA Methylase; N-6 DNA Methylase 257805..261509 Clostridium clariflavum DSM 19732 11560246 YP_005044919.1 CDS Clocl_0254 NC_016627.1 261529 264090 D PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein; hypothetical protein 261529..264090 Clostridium clariflavum DSM 19732 11560247 YP_005044920.1 CDS Clocl_0255 NC_016627.1 264114 265331 D hypothetical protein 264114..265331 Clostridium clariflavum DSM 19732 11560248 YP_005044921.1 CDS Clocl_0256 NC_016627.1 265396 267426 D PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein; hypothetical protein 265396..267426 Clostridium clariflavum DSM 19732 11560249 YP_005044922.1 CDS Clocl_0257 NC_016627.1 267523 268533 D hypothetical protein 267523..268533 Clostridium clariflavum DSM 19732 11560250 YP_005044923.1 CDS Clocl_0258 NC_016627.1 268563 269465 D PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; ADP-ribosylglycohydrolase 268563..269465 Clostridium clariflavum DSM 19732 11560251 YP_005044924.1 CDS Clocl_0259 NC_016627.1 269479 270060 D hypothetical protein 269479..270060 Clostridium clariflavum DSM 19732 11560252 YP_005044925.1 CDS Clocl_0260 NC_016627.1 270231 270968 D PFAM: Protein of unknown function (DUF1444); hypothetical protein 270231..270968 Clostridium clariflavum DSM 19732 11560253 YP_005044926.1 CDS Clocl_0261 NC_016627.1 271093 271359 D hypothetical protein 271093..271359 Clostridium clariflavum DSM 19732 11560254 YP_005044927.1 CDS Clocl_0262 NC_016627.1 271425 271721 R hypothetical protein complement(271425..271721) Clostridium clariflavum DSM 19732 11560255 YP_005044928.1 CDS Clocl_0263 NC_016627.1 271919 272308 D PFAM: Helix-turn-helix; Helix-turn-helix protein 271919..272308 Clostridium clariflavum DSM 19732 11560256 YP_005044929.1 CDS Clocl_0264 NC_016627.1 272311 273102 D PFAM: Domain of unknown function (DUF955); putative Zn peptidase 272311..273102 Clostridium clariflavum DSM 19732 11560257 YP_005044930.1 CDS Clocl_0265 NC_016627.1 273104 273670 D hypothetical protein 273104..273670 Clostridium clariflavum DSM 19732 11560258 YP_005044931.1 CDS Clocl_0266 NC_016627.1 273896 274756 D hypothetical protein 273896..274756 Clostridium clariflavum DSM 19732 11560259 YP_005044932.1 CDS Clocl_0267 NC_016627.1 275025 275228 D hypothetical protein 275025..275228 Clostridium clariflavum DSM 19732 11560260 YP_005044933.1 CDS Clocl_0268 NC_016627.1 275460 276365 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; site-specific recombinase XerD complement(275460..276365) Clostridium clariflavum DSM 19732 11560261 YP_005044934.1 CDS Clocl_0269 NC_016627.1 276608 277519 D hypothetical protein 276608..277519 Clostridium clariflavum DSM 19732 11560262 YP_005044935.1 CDS Clocl_0270 NC_016627.1 277504 280974 D PFAM: Helicase conserved C-terminal domain; HIRAN domain; DEAD/DEAH box helicase; superfamily II helicase 277504..280974 Clostridium clariflavum DSM 19732 11560263 YP_005044936.1 CDS Clocl_0271 NC_016627.1 281096 281557 D hypothetical protein 281096..281557 Clostridium clariflavum DSM 19732 11560264 YP_005044937.1 CDS Clocl_0272 NC_016627.1 281721 282095 D hypothetical protein 281721..282095 Clostridium clariflavum DSM 19732 11560265 YP_005044938.1 CDS Clocl_0273 NC_016627.1 282109 282903 D hypothetical protein 282109..282903 Clostridium clariflavum DSM 19732 11560266 YP_005044939.1 CDS Clocl_0274 NC_016627.1 282900 283769 D hypothetical protein 282900..283769 Clostridium clariflavum DSM 19732 11560267 YP_005044940.1 CDS Clocl_0275 NC_016627.1 283837 284028 R hypothetical protein complement(283837..284028) Clostridium clariflavum DSM 19732 11560268 YP_005044941.1 CDS Clocl_0276 NC_016627.1 284331 285188 D PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal; TnsA endonuclease 284331..285188 Clostridium clariflavum DSM 19732 11560269 YP_005044942.1 CDS Clocl_0277 NC_016627.1 285169 287328 D PFAM: Integrase core domain; integrase family protein 285169..287328 Clostridium clariflavum DSM 19732 11560270 YP_005044943.1 CDS Clocl_0278 NC_016627.1 287336 288997 D manually curated; hypothetical protein 287336..288997 Clostridium clariflavum DSM 19732 11560271 YP_005044944.1 CDS Clocl_0279 NC_016627.1 288991 290721 D hypothetical protein 288991..290721 Clostridium clariflavum DSM 19732 11560272 YP_005044945.1 CDS Clocl_0280 NC_016627.1 291112 292806 D PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain 291112..292806 Clostridium clariflavum DSM 19732 11560273 YP_005044946.1 CDS Clocl_0281 NC_016627.1 293916 294491 D hypothetical protein 293916..294491 Clostridium clariflavum DSM 19732 11560274 YP_005044947.1 CDS Clocl_0282 NC_016627.1 295215 299594 D PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; S-layer homology domain; beta-1,4-xylanase 295215..299594 Clostridium clariflavum DSM 19732 11560275 YP_005044948.1 CDS Clocl_0283 NC_016627.1 299880 300248 D PFAM: Protein of unknown function(DUF2089); hypothetical protein 299880..300248 Clostridium clariflavum DSM 19732 11560276 YP_005044949.1 CDS Clocl_0284 NC_016627.1 300304 301512 D hypothetical protein 300304..301512 Clostridium clariflavum DSM 19732 11560277 YP_005044950.1 CDS Clocl_0285 NC_016627.1 301709 302791 D PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 (bRF-1) 301709..302791 Clostridium clariflavum DSM 19732 11560278 YP_005044951.1 CDS Clocl_0286 NC_016627.1 302994 303734 D PFAM: ZIP Zinc transporter; putative divalent heavy-metal cations transporter 302994..303734 Clostridium clariflavum DSM 19732 11560279 YP_005044952.1 CDS Clocl_0287 NC_016627.1 303821 304876 D PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 303821..304876 Clostridium clariflavum DSM 19732 11560280 YP_005044953.1 CDS Clocl_0288 NC_016627.1 304920 305408 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase 304920..305408 Clostridium clariflavum DSM 19732 11560281 YP_005044954.1 CDS Clocl_0289 NC_016627.1 305512 305961 D PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose-5-phosphate isomerase 305512..305961 Clostridium clariflavum DSM 19732 11560282 YP_005044955.1 CDS Clocl_0290 NC_016627.1 305977 306606 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 305977..306606 Clostridium clariflavum DSM 19732 11560283 YP_005044956.1 CDS Clocl_0291 NC_016627.1 306692 307138 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; deoxycytidylate deaminase 306692..307138 Clostridium clariflavum DSM 19732 11560284 YP_005044957.1 CDS Clocl_0292 NC_016627.1 307307 308431 D PFAM: Glycosyl transferase family 4; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 307307..308431 Clostridium clariflavum DSM 19732 11560285 YP_005044958.1 CDS Clocl_0293 NC_016627.1 308494 309648 D PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; UDP-N-Acetylglucosamine 2-epimerase 308494..309648 Clostridium clariflavum DSM 19732 11560286 YP_005044959.1 CDS Clocl_0294 NC_016627.1 310208 310597 D hypothetical protein 310208..310597 Clostridium clariflavum DSM 19732 11560287 YP_005044960.1 CDS Clocl_0295 NC_016627.1 310610 311365 D PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); F0F1-type ATP synthase subunit alpha 310610..311365 Clostridium clariflavum DSM 19732 11560288 YP_005044961.1 CDS Clocl_0296 NC_016627.1 311379 311597 D PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase F0 subcomplex subunit C 311379..311597 Clostridium clariflavum DSM 19732 11560289 YP_005044962.1 CDS Clocl_0297 NC_016627.1 311708 312196 D PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase F0 subcomplex subunit B 311708..312196 Clostridium clariflavum DSM 19732 11560290 YP_005044963.1 CDS Clocl_0298 NC_016627.1 312284 312820 D PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase F1 subcomplex subunit delta 312284..312820 Clostridium clariflavum DSM 19732 11560291 YP_005044964.1 CDS Clocl_0299 NC_016627.1 312826 314349 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase F1 subcomplex subunit alpha 312826..314349 Clostridium clariflavum DSM 19732 11560292 YP_005044965.1 CDS Clocl_0300 NC_016627.1 314364 315251 D PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase, F1 gamma subunit 314364..315251 Clostridium clariflavum DSM 19732 11560293 YP_005044966.1 CDS Clocl_0301 NC_016627.1 315296 316690 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase F1 subcomplex subunit beta 315296..316690 Clostridium clariflavum DSM 19732 11560294 YP_005044967.1 CDS Clocl_0302 NC_016627.1 316701 317108 D PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase, F1 epsilon subunit 316701..317108 Clostridium clariflavum DSM 19732 11560295 YP_005044968.1 CDS Clocl_0303 NC_016627.1 317447 322318 D PFAM: S-layer homology domain; putative S-layer protein 317447..322318 Clostridium clariflavum DSM 19732 11560296 YP_005044969.1 CDS Clocl_0304 NC_016627.1 322408 326241 D hypothetical protein 322408..326241 Clostridium clariflavum DSM 19732 11560297 YP_005044970.1 CDS Clocl_0305 NC_016627.1 326272 327171 D PFAM: S-layer homology domain; putative S-layer protein 326272..327171 Clostridium clariflavum DSM 19732 11560298 YP_005044971.1 CDS Clocl_0306 NC_016627.1 327387 328142 D PFAM: Protein of unknown function (DUF1779); hypothetical protein 327387..328142 Clostridium clariflavum DSM 19732 11560299 YP_005044972.1 CDS Clocl_0307 NC_016627.1 328213 329484 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 328213..329484 Clostridium clariflavum DSM 19732 11560300 YP_005044973.1 CDS Clocl_0308 NC_016627.1 329718 330764 D PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D; manually curated; stage II sporulation protein D 329718..330764 Clostridium clariflavum DSM 19732 11560301 YP_005044974.1 CDS Clocl_0309 NC_016627.1 330832 331725 D PFAM: Peptidase family M23; metalloendopeptidase-like membrane protein 330832..331725 Clostridium clariflavum DSM 19732 11560302 YP_005044975.1 CDS Clocl_0310 NC_016627.1 331889 333511 D PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 331889..333511 Clostridium clariflavum DSM 19732 11560303 YP_005044976.1 CDS Clocl_0311 NC_016627.1 334175 334957 D PFAM: Dockerin type I repeat; dockerin-like protein 334175..334957 Clostridium clariflavum DSM 19732 11560304 YP_005044977.1 CDS Clocl_0312 NC_016627.1 335015 335728 R PFAM: NlpC/P60 family; cell wall-associated hydrolase, invasion-associated protein complement(335015..335728) Clostridium clariflavum DSM 19732 11560305 YP_005044978.1 CDS Clocl_0313 NC_016627.1 335973 336224 D PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID; sporulation transcriptional regulator SpoIIID 335973..336224 Clostridium clariflavum DSM 19732 11560306 YP_005044979.1 CDS Clocl_0314 NC_016627.1 336653 337687 D PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB 336653..337687 Clostridium clariflavum DSM 19732 11560307 YP_005044980.1 CDS Clocl_0315 NC_016627.1 337826 338605 D PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; manually curated; flagellar hook-basal body protein 337826..338605 Clostridium clariflavum DSM 19732 11560308 YP_005044981.1 CDS Clocl_0316 NC_016627.1 338689 339489 D PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 338689..339489 Clostridium clariflavum DSM 19732 11560309 YP_005044982.1 CDS Clocl_0317 NC_016627.1 339530 339901 D PFAM: Rod binding protein; Rod binding protein 339530..339901 Clostridium clariflavum DSM 19732 11560310 YP_005044983.1 CDS Clocl_0318 NC_016627.1 340151 340585 D PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ 340151..340585 Clostridium clariflavum DSM 19732 11560311 YP_005044984.1 CDS Clocl_0319 NC_016627.1 340727 342142 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(340727..342142) Clostridium clariflavum DSM 19732 11560312 YP_005044985.1 CDS Clocl_0320 NC_016627.1 342651 343463 D PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase; pur operon repressor 342651..343463 Clostridium clariflavum DSM 19732 11560313 YP_005044986.1 CDS Clocl_0321 NC_016627.1 343775 344062 D PFAM: SpoVG; hypothetical protein 343775..344062 Clostridium clariflavum DSM 19732 11560314 YP_005044987.1 CDS Clocl_0322 NC_016627.1 344531 345910 D PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 344531..345910 Clostridium clariflavum DSM 19732 11560315 YP_005044988.1 CDS Clocl_0323 NC_016627.1 346222 347190 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 346222..347190 Clostridium clariflavum DSM 19732 11560316 YP_005044989.1 CDS Clocl_0324 NC_016627.1 347346 347957 D PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 347346..347957 Clostridium clariflavum DSM 19732 11560317 YP_005044990.1 CDS Clocl_0325 NC_016627.1 347967 351500 D PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor Mfd 347967..351500 Clostridium clariflavum DSM 19732 11560318 YP_005044991.1 CDS Clocl_0326 NC_016627.1 351699 352775 D PFAM: PPIC-type PPIASE domain; PPIC-type PPIASE family protein 351699..352775 Clostridium clariflavum DSM 19732 11560319 YP_005044992.1 CDS Clocl_0327 NC_016627.1 352975 353529 D PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T; stage V sporulation protein T 352975..353529 Clostridium clariflavum DSM 19732 11560320 YP_005044993.1 CDS Clocl_0328 NC_016627.1 353635 354006 R PFAM: L,D-transpeptidase catalytic domain; hypothetical protein complement(353635..354006) Clostridium clariflavum DSM 19732 11560321 YP_005044994.1 CDS Clocl_0329 NC_016627.1 354431 355231 D PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; MazG family protein 354431..355231 Clostridium clariflavum DSM 19732 11560322 YP_005044995.1 CDS Clocl_0330 NC_016627.1 355379 355657 D PFAM: Bacterial DNA-binding protein; nucleoid DNA-binding protein 355379..355657 Clostridium clariflavum DSM 19732 11560323 YP_005044996.1 CDS Clocl_0331 NC_016627.1 355910 356149 D PFAM: S4 domain; ribosome-associated heat shock protein 355910..356149 Clostridium clariflavum DSM 19732 11560324 YP_005044997.1 CDS Clocl_0332 NC_016627.1 356444 356737 D PFAM: YabP family; TIGRFAM: sporulation protein YabP; sporulation protein YabP 356444..356737 Clostridium clariflavum DSM 19732 11560325 YP_005044998.1 CDS Clocl_0333 NC_016627.1 356960 357469 D PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ; Spore cortex protein YabQ (Spore_YabQ) 356960..357469 Clostridium clariflavum DSM 19732 11560326 YP_005044999.1 CDS Clocl_0334 NC_016627.1 357650 357928 D PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL; septum formation initiator 357650..357928 Clostridium clariflavum DSM 19732 11560327 YP_005045000.1 CDS Clocl_0335 NC_016627.1 358019 358447 D PFAM: S1 RNA binding domain; putative RNA-binding protein with ribosomal protein S1 domain 358019..358447 Clostridium clariflavum DSM 19732 11560328 YP_005045001.1 CDS Clocl_0338 NC_016627.1 359101 359556 D PFAM: Transposase IS200 like; transposase 359101..359556 Clostridium clariflavum DSM 19732 11560331 YP_005045002.1 CDS Clocl_0340 NC_016627.1 360339 361778 R PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; Trk-type K+ transport system, membrane component complement(360339..361778) Clostridium clariflavum DSM 19732 11560333 YP_005045003.1 CDS Clocl_0341 NC_016627.1 361825 363222 R PFAM: TrkA-N domain; TrkA-C domain; K+ transport system, NAD-binding component complement(361825..363222) Clostridium clariflavum DSM 19732 11560334 YP_005045004.1 CDS Clocl_0342 NC_016627.1 363602 364672 D PFAM: Integrase core domain; transposase, IS30 family 363602..364672 Clostridium clariflavum DSM 19732 11560335 YP_005045005.1 CDS Clocl_0343 NC_016627.1 365012 366229 R PFAM: Transposase, Mutator family; transposase complement(365012..366229) Clostridium clariflavum DSM 19732 11560336 YP_005045006.1 CDS Clocl_0344 NC_016627.1 366861 367214 D PFAM: Transposase; Transposase 366861..367214 Clostridium clariflavum DSM 19732 11560337 YP_005045007.1 CDS Clocl_0345 NC_016627.1 367211 367564 D PFAM: IS66 Orf2 like protein; transposase 367211..367564 Clostridium clariflavum DSM 19732 11560338 YP_005045008.1 CDS Clocl_0347 NC_016627.1 369235 369519 D hypothetical protein 369235..369519 Clostridium clariflavum DSM 19732 11560340 YP_005045009.1 CDS Clocl_0348 NC_016627.1 369569 369670 R hypothetical protein complement(369569..369670) Clostridium clariflavum DSM 19732 11560341 YP_005045010.1 CDS Clocl_0350 NC_016627.1 371022 373478 R PFAM: Cellulase (glycosyl hydrolase family 5); GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; endoglucanase complement(371022..373478) Clostridium clariflavum DSM 19732 11560343 YP_005045011.1 CDS Clocl_0351 NC_016627.1 373868 374728 D hypothetical protein 373868..374728 Clostridium clariflavum DSM 19732 11560344 YP_005045012.1 CDS Clocl_0352 NC_016627.1 375025 375459 D PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 375025..375459 Clostridium clariflavum DSM 19732 11560345 YP_005045013.1 CDS Clocl_0353 NC_016627.1 375647 377113 D PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; transposase 375647..377113 Clostridium clariflavum DSM 19732 11560346 YP_005045014.1 CDS Clocl_0354 NC_016627.1 377130 377900 D PFAM: IstB-like ATP binding protein; DNA replication protein 377130..377900 Clostridium clariflavum DSM 19732 11560347 YP_005045015.1 CDS Clocl_0355 NC_016627.1 378252 379622 R PFAM: Dockerin type I repeat; Leucine Rich Repeat; Leucine Rich Repeat (LRR)-containing protein,dockerin-like protein complement(378252..379622) Clostridium clariflavum DSM 19732 11560348 YP_005045016.1 CDS Clocl_0356 NC_016627.1 380198 382207 R PFAM: Predicted permease; putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component complement(380198..382207) Clostridium clariflavum DSM 19732 11560349 YP_005045017.1 CDS Clocl_0357 NC_016627.1 382200 382976 R PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; antimicrobial peptide ABC transporter ATPase complement(382200..382976) Clostridium clariflavum DSM 19732 11560350 YP_005045018.1 CDS Clocl_0358 NC_016627.1 383150 384145 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; manually curated; signal transduction histidine kinase complement(383150..384145) Clostridium clariflavum DSM 19732 11560351 YP_005045019.1 CDS Clocl_0359 NC_016627.1 384150 384818 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(384150..384818) Clostridium clariflavum DSM 19732 11560352 YP_005045020.1 CDS Clocl_0360 NC_016627.1 384952 386709 R PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease complement(384952..386709) Clostridium clariflavum DSM 19732 11560353 YP_005045021.1 CDS Clocl_0361 NC_016627.1 386711 388435 R PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease complement(386711..388435) Clostridium clariflavum DSM 19732 11560354 YP_005045022.1 CDS Clocl_0362 NC_016627.1 388894 389949 D PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; ABC-type Co2+ transport system, permease component 388894..389949 Clostridium clariflavum DSM 19732 11560355 YP_005045023.1 CDS Clocl_0363 NC_016627.1 389988 390797 D PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; cobalt ABC transporter permease CbiQ 389988..390797 Clostridium clariflavum DSM 19732 11560356 YP_005045024.1 CDS Clocl_0364 NC_016627.1 390798 391550 D PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit; cobalt ABC transporter ATPase 390798..391550 Clostridium clariflavum DSM 19732 11560357 YP_005045025.1 CDS Clocl_0365 NC_016627.1 391666 392877 D manually curated; hypothetical protein 391666..392877 Clostridium clariflavum DSM 19732 11560358 YP_005045026.1 CDS Clocl_0366 NC_016627.1 393000 394184 D PFAM: Copper amine oxidase N-terminal domain; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 393000..394184 Clostridium clariflavum DSM 19732 11560359 YP_005045027.1 CDS Clocl_0367 NC_016627.1 394212 394838 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein 394212..394838 Clostridium clariflavum DSM 19732 11560360 YP_005045028.1 CDS Clocl_0368 NC_016627.1 394939 396621 D PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; putative unusual protein kinase 394939..396621 Clostridium clariflavum DSM 19732 11560361 YP_005045029.1 CDS Clocl_0369 NC_016627.1 396712 399309 R PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase; plasma-membrane calcium-translocating P-type ATPase complement(396712..399309) Clostridium clariflavum DSM 19732 11560362 YP_005045030.1 CDS Clocl_0370 NC_016627.1 399708 400271 D PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: probable dihydroxyacetone kinase regulator; transcriptional regulator 399708..400271 Clostridium clariflavum DSM 19732 11560363 YP_005045031.1 CDS Clocl_0371 NC_016627.1 400647 402119 D PFAM: GumN protein; S-layer homology domain; hypothetical protein 400647..402119 Clostridium clariflavum DSM 19732 11560364 YP_005045032.1 CDS Clocl_0373 NC_016627.1 402869 405379 D PFAM: Chagasin family peptidase inhibitor I42; putative secreted protein 402869..405379 Clostridium clariflavum DSM 19732 11560366 YP_005045033.1 CDS Clocl_0375 NC_016627.1 405958 406896 D PFAM: DnaJ domain; DnaJ C terminal region; DnaJ-class molecular chaperone with C-terminal Zn finger domain 405958..406896 Clostridium clariflavum DSM 19732 11560368 YP_005045034.1 CDS Clocl_0376 NC_016627.1 406949 409543 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone ClpB 406949..409543 Clostridium clariflavum DSM 19732 11560369 YP_005045035.1 CDS Clocl_0377 NC_016627.1 409847 410665 D PFAM: DNA methylase; manually curated; DNA modification methylase 409847..410665 Clostridium clariflavum DSM 19732 11560370 YP_005045036.1 CDS Clocl_0378 NC_016627.1 410698 411885 D PFAM: Domain of unknown function (DUF362); hypothetical protein 410698..411885 Clostridium clariflavum DSM 19732 11560371 YP_005045037.1 CDS Clocl_0382 NC_016627.1 413027 415423 D PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E; stage II sporulation protein E 413027..415423 Clostridium clariflavum DSM 19732 11560375 YP_005045038.1 CDS Clocl_0383 NC_016627.1 415489 415830 D hypothetical protein 415489..415830 Clostridium clariflavum DSM 19732 11560376 YP_005045039.1 CDS Clocl_0384 NC_016627.1 415987 416613 D hypothetical protein 415987..416613 Clostridium clariflavum DSM 19732 11560377 YP_005045040.1 CDS Clocl_0386 NC_016627.1 417212 418939 D PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; putative signal transduction protein with a C-terminal ATPase domain 417212..418939 Clostridium clariflavum DSM 19732 11560379 YP_005045041.1 CDS Clocl_0387 NC_016627.1 418980 420584 D PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; manually curated; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 418980..420584 Clostridium clariflavum DSM 19732 11560380 YP_005045042.1 CDS Clocl_0388 NC_016627.1 420581 421924 D PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 420581..421924 Clostridium clariflavum DSM 19732 11560381 YP_005045043.1 CDS Clocl_0390 NC_016627.1 423592 424017 D PFAM: PilZ domain; PilZ domain-containing protein 423592..424017 Clostridium clariflavum DSM 19732 11560383 YP_005045044.1 CDS Clocl_0391 NC_016627.1 424279 425256 D PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA-U20-dihydrouridine synthase 424279..425256 Clostridium clariflavum DSM 19732 11560384 YP_005045045.1 CDS Clocl_0392 NC_016627.1 425400 426503 D PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; Competence protein A/Cell division protein FtsA 425400..426503 Clostridium clariflavum DSM 19732 11560385 YP_005045046.1 CDS Clocl_0393 NC_016627.1 426687 427211 D PFAM: Thioesterase superfamily; acyl-CoA hydrolase 426687..427211 Clostridium clariflavum DSM 19732 11560386 YP_005045047.1 CDS Clocl_0394 NC_016627.1 427308 427970 R PFAM: NlpC/P60 family; Putative peptidoglycan binding domain; cell wall-associated hydrolase, invasion-associated protein complement(427308..427970) Clostridium clariflavum DSM 19732 11560387 YP_005045048.1 CDS Clocl_0395 NC_016627.1 428541 430079 D PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; stage V sporulation protein B 428541..430079 Clostridium clariflavum DSM 19732 11560388 YP_005045049.1 CDS Clocl_0396 NC_016627.1 430419 430874 D PFAM: Hsp20/alpha crystallin family; molecular chaperone 430419..430874 Clostridium clariflavum DSM 19732 11560389 YP_005045050.1 CDS Clocl_0397 NC_016627.1 431171 431347 D hypothetical protein 431171..431347 Clostridium clariflavum DSM 19732 11560390 YP_005045051.1 CDS Clocl_0398 NC_016627.1 431682 432587 D PFAM: UbiA prenyltransferase family; 4-hydroxybenzoate polyprenyltransferase 431682..432587 Clostridium clariflavum DSM 19732 11560391 YP_005045052.1 CDS Clocl_0399 NC_016627.1 432670 434307 D PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 432670..434307 Clostridium clariflavum DSM 19732 11560392 YP_005045053.1 CDS Clocl_0400 NC_016627.1 434333 434869 D PFAM: Bacterial transferase hexapeptide (three repeats); acyltransferase family protein 434333..434869 Clostridium clariflavum DSM 19732 11560393 YP_005045054.1 CDS Clocl_0401 NC_016627.1 434942 436072 D PFAM: Glycosyl transferases group 1; glycosyltransferase 434942..436072 Clostridium clariflavum DSM 19732 11560394 YP_005045055.1 CDS Clocl_0402 NC_016627.1 436076 436582 D hypothetical protein 436076..436582 Clostridium clariflavum DSM 19732 11560395 YP_005045056.1 CDS Clocl_0403 NC_016627.1 436589 438199 D PFAM: O-Antigen ligase; Lipid A core--O-antigen ligase-like protein 436589..438199 Clostridium clariflavum DSM 19732 11560396 YP_005045057.1 CDS Clocl_0404 NC_016627.1 438234 438917 D manually curated; hypothetical protein 438234..438917 Clostridium clariflavum DSM 19732 11560397 YP_005045058.1 CDS Clocl_0405 NC_016627.1 439020 440579 D PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF-like protein, hydroxyethylthiazole kinase-related protein 439020..440579 Clostridium clariflavum DSM 19732 11560398 YP_005045059.1 CDS Clocl_0406 NC_016627.1 440581 441750 D PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 440581..441750 Clostridium clariflavum DSM 19732 11560399 YP_005045060.1 CDS Clocl_0407 NC_016627.1 442399 442677 D PFAM: Ribbon-helix-helix protein, copG family; putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain 442399..442677 Clostridium clariflavum DSM 19732 11560400 YP_005045061.1 CDS Clocl_0408 NC_016627.1 442677 443027 D PFAM: PemK-like protein; growth inhibitor 442677..443027 Clostridium clariflavum DSM 19732 11560401 YP_005045062.1 CDS Clocl_0409 NC_016627.1 443046 443663 D hypothetical protein 443046..443663 Clostridium clariflavum DSM 19732 11560402 YP_005045063.1 CDS Clocl_0410 NC_016627.1 443890 444438 D hypothetical protein 443890..444438 Clostridium clariflavum DSM 19732 11560403 YP_005045064.1 CDS Clocl_0411 NC_016627.1 444638 445375 R PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family complement(444638..445375) Clostridium clariflavum DSM 19732 11560404 YP_005045065.1 CDS Clocl_0412 NC_016627.1 445405 447642 R PFAM: Glycosyl transferases group 1; Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; polysaccharide pyruvyl transferase CsaB complement(445405..447642) Clostridium clariflavum DSM 19732 11560405 YP_005045066.1 CDS Clocl_0413 NC_016627.1 447899 448804 D PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein 447899..448804 Clostridium clariflavum DSM 19732 11560406 YP_005045067.1 CDS Clocl_0414 NC_016627.1 448932 449774 D PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 448932..449774 Clostridium clariflavum DSM 19732 11560407 YP_005045068.1 CDS Clocl_0415 NC_016627.1 449780 450724 D PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase 449780..450724 Clostridium clariflavum DSM 19732 11560408 YP_005045069.1 CDS Clocl_0416 NC_016627.1 450998 454612 R PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; Ig-like domain-containing protein,Leucine Rich Repeat (LRR)-containing protein,putative S-layer protein complement(450998..454612) Clostridium clariflavum DSM 19732 11560409 YP_005045070.1 CDS Clocl_0417 NC_016627.1 454897 458508 R PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; hypothetical protein complement(454897..458508) Clostridium clariflavum DSM 19732 11560410 YP_005045071.1 CDS Clocl_0418 NC_016627.1 458793 462551 R PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; hypothetical protein complement(458793..462551) Clostridium clariflavum DSM 19732 11560411 YP_005045072.1 CDS Clocl_0419 NC_016627.1 462881 466618 R PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; hypothetical protein complement(462881..466618) Clostridium clariflavum DSM 19732 11560412 YP_005045073.1 CDS Clocl_0420 NC_016627.1 466980 468047 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 466980..468047 Clostridium clariflavum DSM 19732 11560413 YP_005045074.1 CDS Clocl_0421 NC_016627.1 468079 469317 D PFAM: Type II/IV secretion system protein; Flp pilus assembly protein, ATPase CpaF 468079..469317 Clostridium clariflavum DSM 19732 11560414 YP_005045075.1 CDS Clocl_0422 NC_016627.1 469327 470193 D hypothetical protein 469327..470193 Clostridium clariflavum DSM 19732 11560415 YP_005045076.1 CDS Clocl_0423 NC_016627.1 470210 471076 D PFAM: Bacterial type II secretion system protein F domain; Flp pilus assembly protein TadC 470210..471076 Clostridium clariflavum DSM 19732 11560416 YP_005045077.1 CDS Clocl_0424 NC_016627.1 471111 471326 D TIGRFAM: archaeal flagellin N-terminal-like domain; flagellin-like protein 471111..471326 Clostridium clariflavum DSM 19732 11560417 YP_005045078.1 CDS Clocl_0425 NC_016627.1 471458 472120 D PFAM: TadE-like protein; TadE-like protein 471458..472120 Clostridium clariflavum DSM 19732 11560418 YP_005045079.1 CDS Clocl_0426 NC_016627.1 472155 475766 D hypothetical protein 472155..475766 Clostridium clariflavum DSM 19732 11560419 YP_005045080.1 CDS Clocl_0427 NC_016627.1 475783 476448 D hypothetical protein 475783..476448 Clostridium clariflavum DSM 19732 11560420 YP_005045081.1 CDS Clocl_0428 NC_016627.1 476710 477378 D hypothetical protein 476710..477378 Clostridium clariflavum DSM 19732 11560421 YP_005045082.1 CDS Clocl_0430 NC_016627.1 477641 478309 D hypothetical protein 477641..478309 Clostridium clariflavum DSM 19732 11560423 YP_005045083.1 CDS Clocl_0431 NC_016627.1 478439 479806 D hypothetical protein 478439..479806 Clostridium clariflavum DSM 19732 11560424 YP_005045084.1 CDS Clocl_0432 NC_016627.1 479830 480501 D PFAM: Type IV leader peptidase family; Flp pilus assembly protein, protease CpaA 479830..480501 Clostridium clariflavum DSM 19732 11560425 YP_005045085.1 CDS Clocl_0433 NC_016627.1 480491 481825 D PFAM: KWG Leptospira; KWG repeat-containing protein 480491..481825 Clostridium clariflavum DSM 19732 11560426 YP_005045086.1 CDS Clocl_0434 NC_016627.1 481831 483264 D PFAM: FHA domain; manually curated; FHA domain-containing protein 481831..483264 Clostridium clariflavum DSM 19732 11560427 YP_005045087.1 CDS Clocl_0435 NC_016627.1 483303 484061 D PFAM: Protein phosphatase 2C; serine/threonine protein phosphatase 483303..484061 Clostridium clariflavum DSM 19732 11560428 YP_005045088.1 CDS Clocl_0436 NC_016627.1 484076 485758 D PFAM: Protein kinase domain; protein kinase family protein 484076..485758 Clostridium clariflavum DSM 19732 11560429 YP_005045089.1 CDS Clocl_0437 NC_016627.1 485781 486290 D hypothetical protein 485781..486290 Clostridium clariflavum DSM 19732 11560430 YP_005045090.1 CDS Clocl_0438 NC_016627.1 486311 486766 D manually curated; hypothetical protein 486311..486766 Clostridium clariflavum DSM 19732 11560431 YP_005045091.1 CDS Clocl_0439 NC_016627.1 486802 494178 D manually curated; hypothetical protein 486802..494178 Clostridium clariflavum DSM 19732 11560432 YP_005045092.1 CDS Clocl_0440 NC_016627.1 494497 497058 D hypothetical protein 494497..497058 Clostridium clariflavum DSM 19732 11560433 YP_005045093.1 CDS Clocl_0441 NC_016627.1 497045 497977 D PFAM: ABC transporter; multidrug ABC transporter ATPase 497045..497977 Clostridium clariflavum DSM 19732 11560434 YP_005045094.1 CDS Clocl_0442 NC_016627.1 497967 498824 D hypothetical protein 497967..498824 Clostridium clariflavum DSM 19732 11560435 YP_005045095.1 CDS Clocl_0443 NC_016627.1 498873 500618 D hypothetical protein 498873..500618 Clostridium clariflavum DSM 19732 11560436 YP_005045096.1 CDS Clocl_0444 NC_016627.1 500712 501695 D PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 500712..501695 Clostridium clariflavum DSM 19732 11560437 YP_005045097.1 CDS Clocl_0445 NC_016627.1 501704 502582 D PFAM: Protein of unknown function DUF58; hypothetical protein 501704..502582 Clostridium clariflavum DSM 19732 11560438 YP_005045098.1 CDS Clocl_0446 NC_016627.1 502579 504399 D PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; hypothetical protein 502579..504399 Clostridium clariflavum DSM 19732 11560439 YP_005045099.1 CDS Clocl_0447 NC_016627.1 504389 507202 D PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355); membrane protein 504389..507202 Clostridium clariflavum DSM 19732 11560440 YP_005045100.1 CDS Clocl_0449 NC_016627.1 508556 509785 D PFAM: Transposase, Mutator family; transposase 508556..509785 Clostridium clariflavum DSM 19732 11560442 YP_005045101.1 CDS Clocl_0453 NC_016627.1 514669 515361 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(514669..515361) Clostridium clariflavum DSM 19732 11560446 YP_005045102.1 CDS Clocl_0454 NC_016627.1 515336 516808 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(515336..516808) Clostridium clariflavum DSM 19732 11560447 YP_005045103.1 CDS Clocl_0455 NC_016627.1 516849 517598 R hypothetical protein complement(516849..517598) Clostridium clariflavum DSM 19732 11560448 YP_005045104.1 CDS Clocl_0456 NC_016627.1 517614 518330 R PFAM: ABC transporter; multidrug ABC transporter ATPase complement(517614..518330) Clostridium clariflavum DSM 19732 11560449 YP_005045105.1 CDS Clocl_0457 NC_016627.1 518454 518987 R manually curated; hypothetical protein complement(518454..518987) Clostridium clariflavum DSM 19732 11560450 YP_005045106.1 CDS Clocl_0458 NC_016627.1 519024 519929 R manually curated; hypothetical protein complement(519024..519929) Clostridium clariflavum DSM 19732 11560451 YP_005045107.1 CDS Clocl_0459 NC_016627.1 520221 520700 D PFAM: Protein of unknown function (DUF567); hypothetical protein 520221..520700 Clostridium clariflavum DSM 19732 11560452 YP_005045108.1 CDS Clocl_0460 NC_016627.1 520845 521264 R PFAM: Protein of unknown function (DUF3237); hypothetical protein complement(520845..521264) Clostridium clariflavum DSM 19732 11560453 YP_005045109.1 CDS Clocl_0461 NC_016627.1 521336 522238 R PFAM: alpha/beta hydrolase fold; esterase/lipase complement(521336..522238) Clostridium clariflavum DSM 19732 11560454 YP_005045110.1 CDS Clocl_0462 NC_016627.1 522737 523648 R PFAM: Peptidase family U32; collagenase-like protease complement(522737..523648) Clostridium clariflavum DSM 19732 11560455 YP_005045111.1 CDS Clocl_0463 NC_016627.1 524111 525169 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 524111..525169 Clostridium clariflavum DSM 19732 11560456 YP_005045112.1 CDS Clocl_0464 NC_016627.1 525282 527717 D PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family; cellobiose phosphorylase 525282..527717 Clostridium clariflavum DSM 19732 11560457 YP_005045113.1 CDS Clocl_0465 NC_016627.1 527856 530825 D PFAM: Amylo-alpha-1,6-glucosidase; Glycosyltransferase family 36; cellobiose phosphorylase 527856..530825 Clostridium clariflavum DSM 19732 11560458 YP_005045114.1 CDS Clocl_0466 NC_016627.1 530916 531218 R hypothetical protein complement(530916..531218) Clostridium clariflavum DSM 19732 11560459 YP_005045115.1 CDS Clocl_0467 NC_016627.1 531660 536813 R PFAM: Alpha-2-macroglobulin family; Dockerin type I repeat; Alpha-2-macroglobulin family N-terminal region; large extracellular alpha-helical protein complement(531660..536813) Clostridium clariflavum DSM 19732 11560460 YP_005045116.1 CDS Clocl_0468 NC_016627.1 537132 537578 R hypothetical protein complement(537132..537578) Clostridium clariflavum DSM 19732 11560461 YP_005045117.1 CDS Clocl_0469 NC_016627.1 538024 538710 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 538024..538710 Clostridium clariflavum DSM 19732 11560462 YP_005045118.1 CDS Clocl_0470 NC_016627.1 538703 540109 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 538703..540109 Clostridium clariflavum DSM 19732 11560463 YP_005045119.1 CDS Clocl_0471 NC_016627.1 540215 541396 D hypothetical protein 540215..541396 Clostridium clariflavum DSM 19732 11560464 YP_005045120.1 CDS Clocl_0472 NC_016627.1 541432 543513 D PFAM: UvrD/REP helicase; DNA/RNA helicase 541432..543513 Clostridium clariflavum DSM 19732 11560465 YP_005045121.1 CDS Clocl_0473 NC_016627.1 544492 545592 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 544492..545592 Clostridium clariflavum DSM 19732 11560466 YP_005045122.1 CDS Clocl_0474 NC_016627.1 545635 546543 D PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase 545635..546543 Clostridium clariflavum DSM 19732 11560467 YP_005045123.1 CDS Clocl_0475 NC_016627.1 546829 549036 D PFAM: Bacterial regulatory proteins, lacI family; Bacterial extracellular solute-binding protein; family; transcriptional regulator 546829..549036 Clostridium clariflavum DSM 19732 11560468 YP_005045124.1 CDS Clocl_0476 NC_016627.1 549088 549558 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 549088..549558 Clostridium clariflavum DSM 19732 11560469 YP_005045125.1 CDS Clocl_0477 NC_016627.1 549737 551254 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction system adenine methylase HsdM 549737..551254 Clostridium clariflavum DSM 19732 11560470 YP_005045126.1 CDS Clocl_0478 NC_016627.1 551416 552384 D hypothetical protein 551416..552384 Clostridium clariflavum DSM 19732 11560471 YP_005045127.1 CDS Clocl_0479 NC_016627.1 552393 552671 D hypothetical protein 552393..552671 Clostridium clariflavum DSM 19732 11560472 YP_005045128.1 CDS Clocl_0480 NC_016627.1 552634 554307 D PFAM: Uncharacterized protein conserved in bacteria (DUF2326); manually curated; hypothetical protein 552634..554307 Clostridium clariflavum DSM 19732 11560473 YP_005045129.1 CDS Clocl_0481 NC_016627.1 554328 555602 D PFAM: Type I restriction modification DNA specificity domain; restriction endonuclease S subunit 554328..555602 Clostridium clariflavum DSM 19732 11560474 YP_005045130.1 CDS Clocl_0483 NC_016627.1 558774 559487 D PFAM: Protein of unknown function DUF45; putative metal-dependent hydrolase 558774..559487 Clostridium clariflavum DSM 19732 11560476 YP_005045131.1 CDS Clocl_0484 NC_016627.1 559616 560833 D PFAM: Transposase, Mutator family; transposase 559616..560833 Clostridium clariflavum DSM 19732 11560477 YP_005045132.1 CDS Clocl_0485 NC_016627.1 561298 562311 R hypothetical protein complement(561298..562311) Clostridium clariflavum DSM 19732 11560478 YP_005045133.1 CDS Clocl_0486 NC_016627.1 562400 563950 R hypothetical protein complement(562400..563950) Clostridium clariflavum DSM 19732 11560479 YP_005045134.1 CDS Clocl_0488 NC_016627.1 564799 565275 R PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase complement(564799..565275) Clostridium clariflavum DSM 19732 11560481 YP_005045135.1 CDS Clocl_0489 NC_016627.1 565294 566214 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(565294..566214) Clostridium clariflavum DSM 19732 11560482 YP_005045136.1 CDS Clocl_0490 NC_016627.1 566248 567444 R PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; acetylornithine and succinylornithine aminotransferases; acetylornithine aminotransferase complement(566248..567444) Clostridium clariflavum DSM 19732 11560483 YP_005045137.1 CDS Clocl_0491 NC_016627.1 567674 568339 R PFAM: PilZ domain; PilZ domain-containing protein complement(567674..568339) Clostridium clariflavum DSM 19732 11560484 YP_005045138.1 CDS Clocl_0492 NC_016627.1 568690 569604 R PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; N-acetylglutamate kinase complement(568690..569604) Clostridium clariflavum DSM 19732 11560485 YP_005045139.1 CDS Clocl_0493 NC_016627.1 569779 570819 R PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase complement(569779..570819) Clostridium clariflavum DSM 19732 11560486 YP_005045140.1 CDS Clocl_0494 NC_016627.1 571438 572550 D PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATP-binding protein 571438..572550 Clostridium clariflavum DSM 19732 11560487 YP_005045141.1 CDS Clocl_0495 NC_016627.1 572778 573860 D sugar diacid utilization regulator 572778..573860 Clostridium clariflavum DSM 19732 11560488 YP_005045142.1 CDS Clocl_0496 NC_016627.1 573971 574678 D PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; cell division ATP-binding protein FtsE 573971..574678 Clostridium clariflavum DSM 19732 11560489 YP_005045143.1 CDS Clocl_0497 NC_016627.1 574647 575531 D PFAM: Predicted permease; cell division protein 574647..575531 Clostridium clariflavum DSM 19732 11560490 YP_005045144.1 CDS Clocl_0498 NC_016627.1 575646 576773 D PFAM: Peptidase family M23; manually curated; metalloendopeptidase-like membrane protein 575646..576773 Clostridium clariflavum DSM 19732 11560491 YP_005045145.1 CDS Clocl_0499 NC_016627.1 577084 578367 D PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); C-terminal processing peptidase 577084..578367 Clostridium clariflavum DSM 19732 11560492 YP_005045146.1 CDS Clocl_0500 NC_016627.1 578513 578680 D PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 578513..578680 Clostridium clariflavum DSM 19732 11560493 YP_005045147.1 CDS Clocl_0501 NC_016627.1 578922 579677 D PFAM: Methyltransferase domain; methyltransferase family protein 578922..579677 Clostridium clariflavum DSM 19732 11560494 YP_005045148.1 CDS Clocl_0502 NC_016627.1 579840 580040 D PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 579840..580040 Clostridium clariflavum DSM 19732 11560495 YP_005045149.1 CDS Clocl_0503 NC_016627.1 580362 581240 D PFAM: Hsp33 protein; disulfide bond chaperone 580362..581240 Clostridium clariflavum DSM 19732 11560496 YP_005045150.1 CDS Clocl_0509 NC_016627.1 582243 583304 D PFAM: Integrase core domain; transposase, IS30 family 582243..583304 Clostridium clariflavum DSM 19732 11560502 YP_005045151.1 CDS Clocl_0510 NC_016627.1 583529 585301 D hypothetical protein 583529..585301 Clostridium clariflavum DSM 19732 11560503 YP_005045152.1 CDS Clocl_0511 NC_016627.1 585508 586428 D PFAM: Protein of unknown function (DUF2935); hypothetical protein 585508..586428 Clostridium clariflavum DSM 19732 11560504 YP_005045153.1 CDS Clocl_0512 NC_016627.1 586483 586608 D hypothetical protein 586483..586608 Clostridium clariflavum DSM 19732 11560505 YP_005045154.1 CDS Clocl_0513 NC_016627.1 586663 587727 D PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein; sulfate/thiosulfate-binding protein 586663..587727 Clostridium clariflavum DSM 19732 11560506 YP_005045155.1 CDS Clocl_0514 NC_016627.1 587727 588572 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT; sulfate ABC transporter, permease protein CysT 587727..588572 Clostridium clariflavum DSM 19732 11560507 YP_005045156.1 CDS Clocl_0515 NC_016627.1 588590 589471 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysW 588590..589471 Clostridium clariflavum DSM 19732 11560508 YP_005045157.1 CDS Clocl_0516 NC_016627.1 589595 590668 D PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein; sulfate ABC transporter ATP-binding protein 589595..590668 Clostridium clariflavum DSM 19732 11560509 YP_005045158.1 CDS Clocl_0517 NC_016627.1 590834 590971 R hypothetical protein complement(590834..590971) Clostridium clariflavum DSM 19732 11560510 YP_005045159.1 CDS Clocl_0518 NC_016627.1 591268 591921 D PFAM: Putative Phosphatase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase 591268..591921 Clostridium clariflavum DSM 19732 11560511 YP_005045160.1 CDS Clocl_0519 NC_016627.1 591918 592988 D PFAM: 3-dehydroquinate synthase; glycerol dehydrogenase 591918..592988 Clostridium clariflavum DSM 19732 11560512 YP_005045161.1 CDS Clocl_0520 NC_016627.1 593112 595025 D PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; carbon-monoxide dehydrogenase, catalytic subunit 593112..595025 Clostridium clariflavum DSM 19732 11560513 YP_005045162.1 CDS Clocl_0521 NC_016627.1 595207 595428 R manually curated; hypothetical protein complement(595207..595428) Clostridium clariflavum DSM 19732 11560514 YP_005045163.1 CDS Clocl_0522 NC_016627.1 595719 596651 D PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 595719..596651 Clostridium clariflavum DSM 19732 11560515 YP_005045164.1 CDS Clocl_0523 NC_016627.1 596712 597581 D hypothetical protein 596712..597581 Clostridium clariflavum DSM 19732 11560516 YP_005045165.1 CDS Clocl_0524 NC_016627.1 597864 599507 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 597864..599507 Clostridium clariflavum DSM 19732 11560517 YP_005045166.1 CDS Clocl_0525 NC_016627.1 599555 601261 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; histidine kinase,GAF domain-containing protein complement(599555..601261) Clostridium clariflavum DSM 19732 11560518 YP_005045167.1 CDS Clocl_0526 NC_016627.1 601548 602039 D manually curated; hypothetical protein 601548..602039 Clostridium clariflavum DSM 19732 11560519 YP_005045168.1 CDS Clocl_0527 NC_016627.1 602161 602880 D PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; N-acetylmuramoyl-L-alanine amidase CwlD 602161..602880 Clostridium clariflavum DSM 19732 11560520 YP_005045169.1 CDS Clocl_0528 NC_016627.1 603027 604538 D PFAM: Copper amine oxidase N-terminal domain; Bacterial SH3 domain; LysM domain; copper amine oxidase family protein,LysM domain-containing protein,SH3 domain-containing protein 603027..604538 Clostridium clariflavum DSM 19732 11560521 YP_005045170.1 CDS Clocl_0529 NC_016627.1 604614 605033 R PFAM: Leucine Rich Repeat; Leucine Rich Repeat (LRR)-containing protein complement(604614..605033) Clostridium clariflavum DSM 19732 11560522 YP_005045171.1 CDS Clocl_0531 NC_016627.1 606206 606499 R PFAM: Transposase; transposase complement(606206..606499) Clostridium clariflavum DSM 19732 11560524 YP_005045172.1 CDS Clocl_0532 NC_016627.1 606903 607355 R hypothetical protein complement(606903..607355) Clostridium clariflavum DSM 19732 11560525 YP_005045173.1 CDS Clocl_0533 NC_016627.1 607829 609340 R PFAM: Glycosyl hydrolases family 18; Bacterial SH3 domain; LysM domain; putative glycosyl hydrolase complement(607829..609340) Clostridium clariflavum DSM 19732 11560526 YP_005045174.1 CDS Clocl_0534 NC_016627.1 609594 610238 R PFAM: CoA binding domain; Putative DNA-binding protein N-terminus; AT-rich DNA-binding protein complement(609594..610238) Clostridium clariflavum DSM 19732 11560527 YP_005045175.1 CDS Clocl_0535 NC_016627.1 610506 612422 D PFAM: ABC transporter; ABC transporter ATPase 610506..612422 Clostridium clariflavum DSM 19732 11560528 YP_005045176.1 CDS Clocl_0537 NC_016627.1 613511 613804 D PFAM: Transposase; transposase 613511..613804 Clostridium clariflavum DSM 19732 11560529 YP_005045177.1 CDS Clocl_0538 NC_016627.1 613764 614663 D PFAM: Integrase core domain; transposase 613764..614663 Clostridium clariflavum DSM 19732 11560530 YP_005045178.1 CDS Clocl_0539 NC_016627.1 615515 616612 R PFAM: Prephenate dehydrogenase; ACT domain; prephenate dehydrogenase complement(615515..616612) Clostridium clariflavum DSM 19732 11560531 YP_005045179.1 CDS Clocl_0540 NC_016627.1 616602 617627 R PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase complement(616602..617627) Clostridium clariflavum DSM 19732 11560532 YP_005045180.1 CDS Clocl_0541 NC_016627.1 618497 620584 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor EF-G 618497..620584 Clostridium clariflavum DSM 19732 11560533 YP_005045181.1 CDS Clocl_0542 NC_016627.1 620615 620755 D hypothetical protein 620615..620755 Clostridium clariflavum DSM 19732 11560534 YP_005045182.1 CDS Clocl_0543 NC_016627.1 620742 621440 D PFAM: Protein of unknown function (DUF1624); hypothetical protein 620742..621440 Clostridium clariflavum DSM 19732 11560535 YP_005045183.1 CDS Clocl_0544 NC_016627.1 621850 622311 D PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR); transcriptional repressor of class III stress genes 621850..622311 Clostridium clariflavum DSM 19732 11560536 YP_005045184.1 CDS Clocl_0545 NC_016627.1 622575 623072 D PFAM: UvrB/uvrC motif; hypothetical protein 622575..623072 Clostridium clariflavum DSM 19732 11560537 YP_005045185.1 CDS Clocl_0546 NC_016627.1 623103 624131 D PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain; arginine kinase 623103..624131 Clostridium clariflavum DSM 19732 11560538 YP_005045186.1 CDS Clocl_0547 NC_016627.1 624302 626734 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); chaperone ATPase 624302..626734 Clostridium clariflavum DSM 19732 11560539 YP_005045187.1 CDS Clocl_0551 NC_016627.1 628459 629763 D hypothetical protein 628459..629763 Clostridium clariflavum DSM 19732 11560543 YP_005045188.1 CDS Clocl_0552 NC_016627.1 629830 631137 D putative virion core protein (lumpy skin disease virus) 629830..631137 Clostridium clariflavum DSM 19732 11560544 YP_005045189.1 CDS Clocl_0554 NC_016627.1 631487 633589 R PFAM: Transglutaminase-like superfamily; transglutaminase complement(631487..633589) Clostridium clariflavum DSM 19732 11560546 YP_005045190.1 CDS Clocl_0555 NC_016627.1 633590 634807 R PFAM: Protein of unknown function DUF58; hypothetical protein complement(633590..634807) Clostridium clariflavum DSM 19732 11560547 YP_005045191.1 CDS Clocl_0556 NC_016627.1 634831 635766 R PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase complement(634831..635766) Clostridium clariflavum DSM 19732 11560548 YP_005045192.1 CDS Clocl_0557 NC_016627.1 636475 636765 D hypothetical protein 636475..636765 Clostridium clariflavum DSM 19732 11560549 YP_005045193.1 CDS Clocl_0558 NC_016627.1 636900 637379 R hypothetical protein complement(636900..637379) Clostridium clariflavum DSM 19732 11560550 YP_005045194.1 CDS Clocl_0559 NC_016627.1 637828 638898 R PFAM: Integrase core domain; transposase, IS30 family complement(637828..638898) Clostridium clariflavum DSM 19732 11560551 YP_005045195.1 CDS Clocl_0560 NC_016627.1 639021 641186 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 639021..641186 Clostridium clariflavum DSM 19732 11560552 YP_005045196.1 CDS Clocl_0561 NC_016627.1 641281 641898 D PFAM: DUF218 domain; hypothetical protein 641281..641898 Clostridium clariflavum DSM 19732 11560553 YP_005045197.1 CDS Clocl_0562 NC_016627.1 641983 643239 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(641983..643239) Clostridium clariflavum DSM 19732 11560554 YP_005045198.1 CDS Clocl_0563 NC_016627.1 643636 645570 D PFAM: Glycosyl hydrolases family 15; TIGRFAM: oligosaccharide amylase; glycosyl hydrolase family protein 643636..645570 Clostridium clariflavum DSM 19732 11560555 YP_005045199.1 CDS Clocl_0564 NC_016627.1 645604 646968 D PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 645604..646968 Clostridium clariflavum DSM 19732 11560556 YP_005045200.1 CDS Clocl_0565 NC_016627.1 647023 648105 D PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region; putative nucleic-acid-binding protein (contains the HHH domain) 647023..648105 Clostridium clariflavum DSM 19732 11560557 YP_005045201.1 CDS Clocl_0566 NC_016627.1 648249 648644 R hypothetical protein complement(648249..648644) Clostridium clariflavum DSM 19732 11560558 YP_005045202.1 CDS Clocl_0567 NC_016627.1 649204 649683 D PFAM: CarD-like/TRCF domain; CarD-like transcriptional regulator 649204..649683 Clostridium clariflavum DSM 19732 11560559 YP_005045203.1 CDS Clocl_0568 NC_016627.1 649929 650642 D PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 649929..650642 Clostridium clariflavum DSM 19732 11560560 YP_005045204.1 CDS Clocl_0569 NC_016627.1 650682 651413 D PFAM: ABC transporter; ABC-type Na+ transport system, ATPase component 650682..651413 Clostridium clariflavum DSM 19732 11560561 YP_005045205.1 CDS Clocl_0570 NC_016627.1 651403 652617 D PFAM: ABC-2 type transporter; Na+ efflux pump ABC transporter permease 651403..652617 Clostridium clariflavum DSM 19732 11560562 YP_005045206.1 CDS Clocl_0571 NC_016627.1 652745 654550 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 652745..654550 Clostridium clariflavum DSM 19732 11560563 YP_005045207.1 CDS Clocl_0572 NC_016627.1 654661 656490 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 654661..656490 Clostridium clariflavum DSM 19732 11560564 YP_005045208.1 CDS Clocl_0573 NC_016627.1 656498 656968 R PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(656498..656968) Clostridium clariflavum DSM 19732 11560565 YP_005045209.1 CDS Clocl_0574 NC_016627.1 657271 658107 D PFAM: Cysteine-rich secretory protein family; Bacterial SH3 domain; TIGRFAM: uncharacterized protein, YkwD family; hypothetical protein 657271..658107 Clostridium clariflavum DSM 19732 11560566 YP_005045210.1 CDS Clocl_0575 NC_016627.1 658694 660094 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; manually curated; putative efflux protein, MATE family 658694..660094 Clostridium clariflavum DSM 19732 11560567 YP_005045211.1 CDS Clocl_0576 NC_016627.1 660307 661236 D PFAM: Thymidylate synthase; thymidylate synthase 660307..661236 Clostridium clariflavum DSM 19732 11560568 YP_005045212.1 CDS Clocl_0577 NC_016627.1 661248 661778 D PFAM: Protein of unknown function DUF84; hypothetical protein 661248..661778 Clostridium clariflavum DSM 19732 11560569 YP_005045213.1 CDS Clocl_0578 NC_016627.1 661807 662337 D PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; hypothetical protein 661807..662337 Clostridium clariflavum DSM 19732 11560570 YP_005045214.1 CDS Clocl_0579 NC_016627.1 662334 663548 D PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 662334..663548 Clostridium clariflavum DSM 19732 11560571 YP_005045215.1 CDS Clocl_0580 NC_016627.1 663606 665792 D PFAM: Phosphopantetheine attachment site; NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC; subfamily IIIC HAD-superfamily phosphatase 663606..665792 Clostridium clariflavum DSM 19732 11560572 YP_005045216.1 CDS Clocl_0581 NC_016627.1 665817 668702 D PFAM: Glycosyltransferase family 28 N-terminal domain; Condensation domain; manually curated; non-ribosomal peptide synthase 665817..668702 Clostridium clariflavum DSM 19732 11560573 YP_005045217.1 CDS Clocl_0582 NC_016627.1 668982 670475 D PFAM: Integrase core domain; transposase 668982..670475 Clostridium clariflavum DSM 19732 11560574 YP_005045218.1 CDS Clocl_0584 NC_016627.1 671622 672593 R PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; manually curated; RluA family pseudouridine synthase complement(671622..672593) Clostridium clariflavum DSM 19732 11560576 YP_005045219.1 CDS Clocl_0585 NC_016627.1 672639 675083 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Nucleoside-diphosphate-sugar pyrophosphorylase family protein complement(672639..675083) Clostridium clariflavum DSM 19732 11560577 YP_005045220.1 CDS Clocl_0586 NC_016627.1 675803 676882 D PFAM: Putative peptidoglycan binding domain; putative peptidoglycan-binding domain-containing protein 675803..676882 Clostridium clariflavum DSM 19732 11560578 YP_005045221.1 CDS Clocl_0587 NC_016627.1 677106 679088 D PFAM: Copper amine oxidase N-terminal domain; D-alanyl-D-alanine carboxypeptidase; beta-lactamase class A 677106..679088 Clostridium clariflavum DSM 19732 11560579 YP_005045222.1 CDS Clocl_0588 NC_016627.1 679224 679607 D PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP 679224..679607 Clostridium clariflavum DSM 19732 11560580 YP_005045223.1 CDS Clocl_0589 NC_016627.1 679642 680871 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; NAD(P)H-nitrite reductase 679642..680871 Clostridium clariflavum DSM 19732 11560581 YP_005045224.1 CDS Clocl_0590 NC_016627.1 680887 681624 D PFAM: Methyltransferase domain; methyltransferase family protein 680887..681624 Clostridium clariflavum DSM 19732 11560582 YP_005045225.1 CDS Clocl_0591 NC_016627.1 681946 682911 D PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE; UV-damage endonuclease 681946..682911 Clostridium clariflavum DSM 19732 11560583 YP_005045226.1 CDS Clocl_0592 NC_016627.1 682962 683129 D hypothetical protein 682962..683129 Clostridium clariflavum DSM 19732 11560584 YP_005045227.1 CDS Clocl_0593 NC_016627.1 683291 683491 D hypothetical protein 683291..683491 Clostridium clariflavum DSM 19732 11560585 YP_005045228.1 CDS Clocl_0594 NC_016627.1 683625 684554 D PFAM: pfkB family carbohydrate kinase; TIGRFAM: tagatose-6-phosphate kinase; 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family; 1-phosphofructokinase 683625..684554 Clostridium clariflavum DSM 19732 11560586 YP_005045229.1 CDS Clocl_0595 NC_016627.1 684693 685739 R PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(684693..685739) Clostridium clariflavum DSM 19732 11560587 YP_005045230.1 CDS Clocl_0596 NC_016627.1 686213 688366 D PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; transcriptional accessory protein 686213..688366 Clostridium clariflavum DSM 19732 11560588 YP_005045231.1 CDS Clocl_0597 NC_016627.1 688370 689254 D manually curated; hypothetical protein 688370..689254 Clostridium clariflavum DSM 19732 11560589 YP_005045232.1 CDS Clocl_0598 NC_016627.1 689406 690104 R PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme; spore cortex-lytic protein complement(689406..690104) Clostridium clariflavum DSM 19732 11560590 YP_005045233.1 CDS Clocl_0599 NC_016627.1 690211 690549 R hypothetical protein complement(690211..690549) Clostridium clariflavum DSM 19732 11560591 YP_005045234.1 CDS Clocl_0600 NC_016627.1 690546 690974 R hypothetical protein complement(690546..690974) Clostridium clariflavum DSM 19732 11560592 YP_005045235.1 CDS Clocl_0601 NC_016627.1 690998 691324 R hypothetical protein complement(690998..691324) Clostridium clariflavum DSM 19732 11560593 YP_005045236.1 CDS Clocl_0602 NC_016627.1 691533 691733 R hypothetical protein complement(691533..691733) Clostridium clariflavum DSM 19732 11560594 YP_005045237.1 CDS Clocl_0603 NC_016627.1 692275 692943 D PFAM: Cytochrome C biogenesis protein transmembrane region; cytochrome c biogenesis protein 692275..692943 Clostridium clariflavum DSM 19732 11560595 YP_005045238.1 CDS Clocl_0604 NC_016627.1 692991 693590 D PFAM: AhpC/TSA family; peroxiredoxin 692991..693590 Clostridium clariflavum DSM 19732 11560596 YP_005045239.1 CDS Clocl_0605 NC_016627.1 693677 694957 D PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin-disulfide reductase 693677..694957 Clostridium clariflavum DSM 19732 11560597 YP_005045240.1 CDS Clocl_0606 NC_016627.1 694965 695861 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 694965..695861 Clostridium clariflavum DSM 19732 11560598 YP_005045241.1 CDS Clocl_0608 NC_016627.1 696566 699031 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; SirA-like protein; DsrE/DsrF-like family; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; TIGRFAM: CoA-disulfide reductase; NAD(FAD)-dependent dehydrogenase 696566..699031 Clostridium clariflavum DSM 19732 11560600 YP_005045242.1 CDS Clocl_0609 NC_016627.1 699099 699380 D PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 699099..699380 Clostridium clariflavum DSM 19732 11560601 YP_005045243.1 CDS Clocl_0610 NC_016627.1 699397 700086 D PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 699397..700086 Clostridium clariflavum DSM 19732 11560602 YP_005045244.1 CDS Clocl_0611 NC_016627.1 700184 701029 D PFAM: Sporulation and spore germination; sporulation/spore germination protein 700184..701029 Clostridium clariflavum DSM 19732 11560603 YP_005045245.1 CDS Clocl_0612 NC_016627.1 701226 701768 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 701226..701768 Clostridium clariflavum DSM 19732 11560604 YP_005045246.1 CDS Clocl_0613 NC_016627.1 701771 702247 D hypothetical protein 701771..702247 Clostridium clariflavum DSM 19732 11560983 YP_005045247.1 CDS Clocl_0614 NC_016627.1 702255 703064 D PFAM: TM2 domain; TM2 domain-containing protein 702255..703064 Clostridium clariflavum DSM 19732 11560984 YP_005045248.1 CDS Clocl_0615 NC_016627.1 703094 704467 D hypothetical protein 703094..704467 Clostridium clariflavum DSM 19732 11560985 YP_005045249.1 CDS Clocl_0616 NC_016627.1 704946 705116 D hypothetical protein 704946..705116 Clostridium clariflavum DSM 19732 11560986 YP_005045250.1 CDS Clocl_0617 NC_016627.1 705164 706522 D manually curated; hypothetical protein 705164..706522 Clostridium clariflavum DSM 19732 11560987 YP_005045251.1 CDS Clocl_0618 NC_016627.1 706889 710926 D PFAM: S-layer homology domain; manually curated; putative S-layer protein 706889..710926 Clostridium clariflavum DSM 19732 11560988 YP_005045252.1 CDS Clocl_0619 NC_016627.1 711199 712701 D PFAM: Bacterial protein of unknown function (DUF853); putative ATPase 711199..712701 Clostridium clariflavum DSM 19732 11560989 YP_005045253.1 CDS Clocl_0620 NC_016627.1 712711 713358 D PFAM: Putative cyclase; putative metal-dependent hydrolase 712711..713358 Clostridium clariflavum DSM 19732 11560990 YP_005045254.1 CDS Clocl_0622 NC_016627.1 719063 719278 R PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; putative regulatory protein, FmdB family complement(719063..719278) Clostridium clariflavum DSM 19732 11560992 YP_005045255.1 CDS Clocl_0623 NC_016627.1 719733 720848 D PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 719733..720848 Clostridium clariflavum DSM 19732 11560993 YP_005045256.1 CDS Clocl_0624 NC_016627.1 720937 721743 D PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; glutamate racemase 720937..721743 Clostridium clariflavum DSM 19732 11560994 YP_005045257.1 CDS Clocl_0625 NC_016627.1 721924 722391 D PFAM: Domain of unknown function (DUF1934); hypothetical protein 721924..722391 Clostridium clariflavum DSM 19732 11560995 YP_005045258.1 CDS Clocl_0626 NC_016627.1 722354 724048 D PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 722354..724048 Clostridium clariflavum DSM 19732 11560996 YP_005045259.1 CDS Clocl_0627 NC_016627.1 724855 725493 D hypothetical protein 724855..725493 Clostridium clariflavum DSM 19732 11560997 YP_005045260.1 CDS Clocl_0628 NC_016627.1 725664 729188 D PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 725664..729188 Clostridium clariflavum DSM 19732 11560998 YP_005045261.1 CDS Clocl_0629 NC_016627.1 729403 732369 D PFAM: S-layer homology domain; putative S-layer protein 729403..732369 Clostridium clariflavum DSM 19732 11560999 YP_005045262.1 CDS Clocl_0630 NC_016627.1 732417 733955 D PFAM: S-layer homology domain; putative S-layer protein 732417..733955 Clostridium clariflavum DSM 19732 11561000 YP_005045263.1 CDS Clocl_0631 NC_016627.1 733983 735479 D PFAM: Putative peptidoglycan binding domain; Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); C-terminal processing peptidase 733983..735479 Clostridium clariflavum DSM 19732 11561001 YP_005045264.1 CDS Clocl_0632 NC_016627.1 735640 736032 R hypothetical protein complement(735640..736032) Clostridium clariflavum DSM 19732 11561002 YP_005045265.1 CDS Clocl_0634 NC_016627.1 738534 740144 D PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 738534..740144 Clostridium clariflavum DSM 19732 11561004 YP_005045266.1 CDS Clocl_0635 NC_016627.1 740343 741068 D PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R; stage II sporulation protein R 740343..741068 Clostridium clariflavum DSM 19732 11561005 YP_005045267.1 CDS Clocl_0636 NC_016627.1 741500 742192 D PFAM: MgtC family; hypothetical protein 741500..742192 Clostridium clariflavum DSM 19732 11561006 YP_005045268.1 CDS Clocl_0637 NC_016627.1 742389 743846 D PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase 742389..743846 Clostridium clariflavum DSM 19732 11561007 YP_005045269.1 CDS Clocl_0638 NC_016627.1 744120 746834 D PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase; sarco/endoplasmic reticulum calcium-translocating P-type ATPase 744120..746834 Clostridium clariflavum DSM 19732 11561008 YP_005045270.1 CDS Clocl_0639 NC_016627.1 747156 748223 D PFAM: ABC transporter; multidrug ABC transporter ATPase 747156..748223 Clostridium clariflavum DSM 19732 11561009 YP_005045271.1 CDS Clocl_0640 NC_016627.1 748226 748942 D hypothetical protein 748226..748942 Clostridium clariflavum DSM 19732 11561010 YP_005045272.1 CDS Clocl_0641 NC_016627.1 748949 750397 D PFAM: ABC-type uncharacterized transport system; ABC transporter 748949..750397 Clostridium clariflavum DSM 19732 11561011 YP_005045273.1 CDS Clocl_0642 NC_016627.1 750394 751788 D hypothetical protein 750394..751788 Clostridium clariflavum DSM 19732 11561012 YP_005045274.1 CDS Clocl_0643 NC_016627.1 752017 753150 D hypothetical protein 752017..753150 Clostridium clariflavum DSM 19732 11561013 YP_005045275.1 CDS Clocl_0644 NC_016627.1 753255 754448 D hypothetical protein 753255..754448 Clostridium clariflavum DSM 19732 11561014 YP_005045276.1 CDS Clocl_0645 NC_016627.1 754554 755267 D PFAM: Colicin V production protein; putative membrane protein, required for colicin V production 754554..755267 Clostridium clariflavum DSM 19732 11561015 YP_005045277.1 CDS Clocl_0646 NC_016627.1 755511 757175 D PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 755511..757175 Clostridium clariflavum DSM 19732 11561016 YP_005045278.1 CDS Clocl_0647 NC_016627.1 757189 758856 D PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase, large subunit 757189..758856 Clostridium clariflavum DSM 19732 11561017 YP_005045279.1 CDS Clocl_0648 NC_016627.1 759097 759246 D PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 759097..759246 Clostridium clariflavum DSM 19732 11561018 YP_005045280.1 CDS Clocl_0649 NC_016627.1 759393 759617 D PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; Preprotein translocase subunit SecE 759393..759617 Clostridium clariflavum DSM 19732 11561019 YP_005045281.1 CDS Clocl_0650 NC_016627.1 759671 760204 D PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein nusG 759671..760204 Clostridium clariflavum DSM 19732 11561020 YP_005045282.1 CDS Clocl_0651 NC_016627.1 760476 760901 D PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 760476..760901 Clostridium clariflavum DSM 19732 11561021 YP_005045283.1 CDS Clocl_0652 NC_016627.1 761083 761778 D PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 761083..761778 Clostridium clariflavum DSM 19732 11561022 YP_005045284.1 CDS Clocl_0653 NC_016627.1 762065 762598 D PFAM: Ribosomal protein L10; 50S ribosomal protein L10 762065..762598 Clostridium clariflavum DSM 19732 11561023 YP_005045285.1 CDS Clocl_0654 NC_016627.1 762673 763059 D PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L12 762673..763059 Clostridium clariflavum DSM 19732 11561024 YP_005045286.1 CDS Clocl_0655 NC_016627.1 764058 767810 D PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 764058..767810 Clostridium clariflavum DSM 19732 11561025 YP_005045287.1 CDS Clocl_0656 NC_016627.1 767822 771325 D PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 767822..771325 Clostridium clariflavum DSM 19732 11561026 YP_005045288.1 CDS Clocl_0657 NC_016627.1 771596 771838 D PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; ribosomal protein HS6-type (S12/L30/L7a) 771596..771838 Clostridium clariflavum DSM 19732 11561027 YP_005045289.1 CDS Clocl_0658 NC_016627.1 771948 772376 D PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 771948..772376 Clostridium clariflavum DSM 19732 11561028 YP_005045290.1 CDS Clocl_0659 NC_016627.1 772547 773017 D PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; manually curated; 30S ribosomal protein S7 772547..773017 Clostridium clariflavum DSM 19732 11561029 YP_005045291.1 CDS Clocl_0660 NC_016627.1 773089 775167 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor EF-G 773089..775167 Clostridium clariflavum DSM 19732 11561030 YP_005045292.1 CDS Clocl_0661 NC_016627.1 775296 776498 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor TU 775296..776498 Clostridium clariflavum DSM 19732 11561031 YP_005045293.1 CDS Clocl_0662 NC_016627.1 776639 777193 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 776639..777193 Clostridium clariflavum DSM 19732 11561032 YP_005045294.1 CDS Clocl_0663 NC_016627.1 777190 777768 D manually curated; hypothetical protein 777190..777768 Clostridium clariflavum DSM 19732 11561033 YP_005045295.1 CDS Clocl_0664 NC_016627.1 777933 778205 D hypothetical protein 777933..778205 Clostridium clariflavum DSM 19732 11561034 YP_005045296.1 CDS Clocl_0665 NC_016627.1 778451 779356 D PFAM: Putative peptidoglycan binding domain; VanW like protein; putative vancomycin resistance protein 778451..779356 Clostridium clariflavum DSM 19732 11561035 YP_005045297.1 CDS Clocl_0666 NC_016627.1 779508 779771 D PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein 779508..779771 Clostridium clariflavum DSM 19732 11561036 YP_005045298.1 CDS Clocl_0667 NC_016627.1 779778 781508 D PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 779778..781508 Clostridium clariflavum DSM 19732 11561037 YP_005045299.1 CDS Clocl_0668 NC_016627.1 781638 783494 D PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; manually curated; Excinuclease ABC subunit C 781638..783494 Clostridium clariflavum DSM 19732 11561038 YP_005045300.1 CDS Clocl_0669 NC_016627.1 783495 784196 D PFAM: Calcineurin-like phosphoesterase; putative phosphohydrolase 783495..784196 Clostridium clariflavum DSM 19732 11561039 YP_005045301.1 CDS Clocl_0670 NC_016627.1 784513 785799 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; trigger factor 784513..785799 Clostridium clariflavum DSM 19732 11561040 YP_005045302.1 CDS Clocl_0671 NC_016627.1 785866 786450 D PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 785866..786450 Clostridium clariflavum DSM 19732 11561041 YP_005045303.1 CDS Clocl_0672 NC_016627.1 786464 787759 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); endopeptidase Clp ATP-binding regulatory subunit ClpX 786464..787759 Clostridium clariflavum DSM 19732 11561042 YP_005045304.1 CDS Clocl_0673 NC_016627.1 788106 788312 D hypothetical protein 788106..788312 Clostridium clariflavum DSM 19732 11561043 YP_005045305.1 CDS Clocl_0674 NC_016627.1 788568 790247 D PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease; ATP-dependent protease LonB 788568..790247 Clostridium clariflavum DSM 19732 11561044 YP_005045306.1 CDS Clocl_0675 NC_016627.1 790547 791569 D PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; O-sialoglycoprotein endopeptidase 790547..791569 Clostridium clariflavum DSM 19732 11561045 YP_005045307.1 CDS Clocl_0676 NC_016627.1 792220 793554 D PFAM: Radical SAM superfamily; PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512); putative Fe-S oxidoreductase 792220..793554 Clostridium clariflavum DSM 19732 11561046 YP_005045308.1 CDS Clocl_0677 NC_016627.1 793583 794260 R PFAM: Transglycosylase SLT domain; lytic murein transglycosylase complement(793583..794260) Clostridium clariflavum DSM 19732 11561047 YP_005045309.1 CDS Clocl_0678 NC_016627.1 794394 794717 R hypothetical protein complement(794394..794717) Clostridium clariflavum DSM 19732 11561048 YP_005045310.1 CDS Clocl_0679 NC_016627.1 794942 795406 D PFAM: Protein of unknown function (DUF402); hypothetical protein 794942..795406 Clostridium clariflavum DSM 19732 11561049 YP_005045311.1 CDS Clocl_0680 NC_016627.1 795474 796310 D PFAM: PHP domain; putative metal-dependent phosphoesterase, PHP family 795474..796310 Clostridium clariflavum DSM 19732 11561050 YP_005045312.1 CDS Clocl_0682 NC_016627.1 796672 797136 D PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 796672..797136 Clostridium clariflavum DSM 19732 11561051 YP_005045313.1 CDS Clocl_0684 NC_016627.1 799131 799412 R hypothetical protein complement(799131..799412) Clostridium clariflavum DSM 19732 11561053 YP_005045314.1 CDS Clocl_0685 NC_016627.1 799409 800257 R hypothetical protein complement(799409..800257) Clostridium clariflavum DSM 19732 11561054 YP_005045315.1 CDS Clocl_0686 NC_016627.1 800398 800607 D hypothetical protein 800398..800607 Clostridium clariflavum DSM 19732 11561055 YP_005045316.1 CDS Clocl_0687 NC_016627.1 800647 801606 D hypothetical protein 800647..801606 Clostridium clariflavum DSM 19732 11561056 YP_005045317.1 CDS Clocl_0688 NC_016627.1 801825 803114 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(801825..803114) Clostridium clariflavum DSM 19732 11561057 YP_005045318.1 CDS Clocl_0689 NC_016627.1 803531 805564 D hypothetical protein 803531..805564 Clostridium clariflavum DSM 19732 11561058 YP_005045319.1 CDS Clocl_0690 NC_016627.1 805564 805971 D hypothetical protein 805564..805971 Clostridium clariflavum DSM 19732 11561059 YP_005045320.1 CDS Clocl_0691 NC_016627.1 805958 806440 D hypothetical protein 805958..806440 Clostridium clariflavum DSM 19732 11561060 YP_005045321.1 CDS Clocl_0692 NC_016627.1 806421 807029 D hypothetical protein 806421..807029 Clostridium clariflavum DSM 19732 11561061 YP_005045322.1 CDS Clocl_0693 NC_016627.1 807115 807897 D PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; DNA-directed RNA polymerase specialized sigma subunit 807115..807897 Clostridium clariflavum DSM 19732 11561062 YP_005045323.1 CDS Clocl_0694 NC_016627.1 807930 808334 D hypothetical protein 807930..808334 Clostridium clariflavum DSM 19732 11561063 YP_005045324.1 CDS Clocl_0695 NC_016627.1 808380 808556 R hypothetical protein complement(808380..808556) Clostridium clariflavum DSM 19732 11561064 YP_005045325.1 CDS Clocl_0696 NC_016627.1 808572 809081 R hypothetical protein complement(808572..809081) Clostridium clariflavum DSM 19732 11561065 YP_005045326.1 CDS Clocl_0697 NC_016627.1 809115 809483 R hypothetical protein complement(809115..809483) Clostridium clariflavum DSM 19732 11561066 YP_005045327.1 CDS Clocl_0698 NC_016627.1 809668 809895 D PFAM: Helix-turn-helix; putative transcriptional regulator 809668..809895 Clostridium clariflavum DSM 19732 11561067 YP_005045328.1 CDS Clocl_0699 NC_016627.1 809904 810080 D hypothetical protein 809904..810080 Clostridium clariflavum DSM 19732 11561068 YP_005045329.1 CDS Clocl_0700 NC_016627.1 810766 811194 D hypothetical protein 810766..811194 Clostridium clariflavum DSM 19732 11561069 YP_005045330.1 CDS Clocl_0701 NC_016627.1 811263 811703 D hypothetical protein 811263..811703 Clostridium clariflavum DSM 19732 11561070 YP_005045331.1 CDS Clocl_0703 NC_016627.1 813236 813448 D hypothetical protein 813236..813448 Clostridium clariflavum DSM 19732 11561072 YP_005045332.1 CDS Clocl_0704 NC_016627.1 813928 814221 D PFAM: Transposase; transposase 813928..814221 Clostridium clariflavum DSM 19732 11561073 YP_005045333.1 CDS Clocl_0705 NC_016627.1 814181 815080 D PFAM: Integrase core domain; transposase 814181..815080 Clostridium clariflavum DSM 19732 11561074 YP_005045334.1 CDS Clocl_0706 NC_016627.1 815574 816257 D hypothetical protein 815574..816257 Clostridium clariflavum DSM 19732 11561075 YP_005045335.1 CDS Clocl_0707 NC_016627.1 816392 816706 R hypothetical protein complement(816392..816706) Clostridium clariflavum DSM 19732 11561076 YP_005045336.1 CDS Clocl_0708 NC_016627.1 816960 817406 D hypothetical protein 816960..817406 Clostridium clariflavum DSM 19732 11561077 YP_005045337.1 CDS Clocl_0709 NC_016627.1 817796 817984 D hypothetical protein 817796..817984 Clostridium clariflavum DSM 19732 11561078 YP_005045338.1 CDS Clocl_0710 NC_016627.1 817962 818768 R PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); CBM6-containing protein,dockerin-like protein complement(817962..818768) Clostridium clariflavum DSM 19732 11561079 YP_005045339.1 CDS Clocl_0711 NC_016627.1 818876 819640 R hypothetical protein complement(818876..819640) Clostridium clariflavum DSM 19732 11561080 YP_005045340.1 CDS Clocl_0713 NC_016627.1 820466 822037 D PFAM: DnaJ domain; DnaJ-class molecular chaperone with C-terminal Zn finger domain 820466..822037 Clostridium clariflavum DSM 19732 11561082 YP_005045341.1 CDS Clocl_0714 NC_016627.1 822333 823550 R PFAM: Transposase, Mutator family; transposase complement(822333..823550) Clostridium clariflavum DSM 19732 11561083 YP_005045342.1 CDS Clocl_0715 NC_016627.1 823821 825179 R hypothetical protein complement(823821..825179) Clostridium clariflavum DSM 19732 11561084 YP_005045343.1 CDS Clocl_0716 NC_016627.1 825403 826548 R hypothetical protein complement(825403..826548) Clostridium clariflavum DSM 19732 11561085 YP_005045344.1 CDS Clocl_0717 NC_016627.1 826740 828130 D PFAM: Transposase DDE domain; manually curated; transposase family protein join(826740..827540,827540..828130) Clostridium clariflavum DSM 19732 11561086 YP_005045345.1 CDS Clocl_0718 NC_016627.1 828476 828775 D PFAM: Protein of unknown function(DUF2089); hypothetical protein 828476..828775 Clostridium clariflavum DSM 19732 11561087 YP_005045346.1 CDS Clocl_0719 NC_016627.1 828779 829087 D hypothetical protein 828779..829087 Clostridium clariflavum DSM 19732 11561088 YP_005045347.1 CDS Clocl_0720 NC_016627.1 829950 832292 D PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase class III catalytic subunit 829950..832292 Clostridium clariflavum DSM 19732 11561089 YP_005045348.1 CDS Clocl_0721 NC_016627.1 832335 832853 D PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 832335..832853 Clostridium clariflavum DSM 19732 11561090 YP_005045349.1 CDS Clocl_0722 NC_016627.1 833909 835531 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 833909..835531 Clostridium clariflavum DSM 19732 11561091 YP_005045350.1 CDS Clocl_0723 NC_016627.1 835570 837204 D PFAM: Histidine kinase; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 835570..837204 Clostridium clariflavum DSM 19732 11561092 YP_005045351.1 CDS Clocl_0724 NC_016627.1 837179 837826 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 837179..837826 Clostridium clariflavum DSM 19732 11561093 YP_005045352.1 CDS Clocl_0726 NC_016627.1 838836 839309 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 838836..839309 Clostridium clariflavum DSM 19732 11561095 YP_005045353.1 CDS Clocl_0727 NC_016627.1 839450 840034 D PFAM: Uncharacterised protein family (UPF0157); hypothetical protein 839450..840034 Clostridium clariflavum DSM 19732 11561096 YP_005045354.1 CDS Clocl_0728 NC_016627.1 840031 840123 D hypothetical protein 840031..840123 Clostridium clariflavum DSM 19732 11561097 YP_005045355.1 CDS Clocl_0729 NC_016627.1 840132 840230 D hypothetical protein 840132..840230 Clostridium clariflavum DSM 19732 11561098 YP_005045356.1 CDS Clocl_0730 NC_016627.1 840208 840420 D hypothetical protein 840208..840420 Clostridium clariflavum DSM 19732 11561099 YP_005045357.1 CDS Clocl_0731 NC_016627.1 840515 840808 D hypothetical protein 840515..840808 Clostridium clariflavum DSM 19732 11561100 YP_005045358.1 CDS Clocl_0733 NC_016627.1 841269 842192 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 841269..842192 Clostridium clariflavum DSM 19732 11561102 YP_005045359.1 CDS Clocl_0734 NC_016627.1 842719 843597 D PFAM: Bacterial transcription activator, effector binding domain; hypothetical protein 842719..843597 Clostridium clariflavum DSM 19732 11561103 YP_005045360.1 CDS Clocl_0736 NC_016627.1 845185 845679 D hypothetical protein 845185..845679 Clostridium clariflavum DSM 19732 11561105 YP_005045361.1 CDS Clocl_0737 NC_016627.1 845766 847088 D hypothetical protein 845766..847088 Clostridium clariflavum DSM 19732 11561106 YP_005045362.1 CDS Clocl_0738 NC_016627.1 847072 848124 D hypothetical protein 847072..848124 Clostridium clariflavum DSM 19732 11561107 YP_005045363.1 CDS Clocl_0739 NC_016627.1 848587 850050 D PFAM: TROVE domain; TROVE domain-containing protein 848587..850050 Clostridium clariflavum DSM 19732 11561108 YP_005045364.1 CDS Clocl_0740 NC_016627.1 850064 851644 D hypothetical protein 850064..851644 Clostridium clariflavum DSM 19732 11561109 YP_005045365.1 CDS Clocl_0741 NC_016627.1 851657 851896 D hypothetical protein 851657..851896 Clostridium clariflavum DSM 19732 11561110 YP_005045366.1 CDS Clocl_0742 NC_016627.1 852290 853687 D PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1; 3' terminal RNA ribose 2'-O-methyltransferase Hen1 852290..853687 Clostridium clariflavum DSM 19732 11561111 YP_005045367.1 CDS Clocl_0743 NC_016627.1 853684 856296 D PFAM: Calcineurin-like phosphoesterase; Chromatin associated protein KTI12; TIGRFAM: polynucleotide kinase-phosphatase; polynucleotide 3'-phosphatase,polynucleotide 5'-hydroxyl-kinase,polynucleotide 2',3'-cyclic phosphate phosphodiesterase 853684..856296 Clostridium clariflavum DSM 19732 11561112 YP_005045368.1 CDS Clocl_0744 NC_016627.1 856336 857073 D PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; PHP family phosphohydrolase, histidinol phosphatase 856336..857073 Clostridium clariflavum DSM 19732 11561113 YP_005045369.1 CDS Clocl_0745 NC_016627.1 857080 858629 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(join(857080..857838,857838..858629)) Clostridium clariflavum DSM 19732 11561114 YP_005045370.1 CDS Clocl_0746 NC_016627.1 858992 859630 D hypothetical protein 858992..859630 Clostridium clariflavum DSM 19732 11561115 YP_005045371.1 CDS Clocl_0747 NC_016627.1 860020 860676 D hypothetical protein 860020..860676 Clostridium clariflavum DSM 19732 11561116 YP_005045372.1 CDS Clocl_0748 NC_016627.1 860837 862386 D PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase join(860837..861628,861628..862386) Clostridium clariflavum DSM 19732 11561117 YP_005045373.1 CDS Clocl_0749 NC_016627.1 862892 863605 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 862892..863605 Clostridium clariflavum DSM 19732 11561118 YP_005045374.1 CDS Clocl_0750 NC_016627.1 863739 864197 D PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; hypothetical protein 863739..864197 Clostridium clariflavum DSM 19732 11561119 YP_005045375.1 CDS Clocl_0751 NC_016627.1 864398 865225 D PFAM: ADP-ribosylglycohydrolase; ADP-ribosylglycohydrolase 864398..865225 Clostridium clariflavum DSM 19732 11561120 YP_005045376.1 CDS Clocl_0752 NC_016627.1 865438 866142 D PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 865438..866142 Clostridium clariflavum DSM 19732 11561121 YP_005045377.1 CDS Clocl_0753 NC_016627.1 866135 867151 D PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain; cytidyltransferase-related enzyme 866135..867151 Clostridium clariflavum DSM 19732 11561122 YP_005045378.1 CDS Clocl_0754 NC_016627.1 867312 867530 R PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein complement(867312..867530) Clostridium clariflavum DSM 19732 11561123 YP_005045379.1 CDS Clocl_0755 NC_016627.1 867846 868544 D PFAM: Manganese containing catalase; Mn-containing catalase 867846..868544 Clostridium clariflavum DSM 19732 11561124 YP_005045380.1 CDS Clocl_0756 NC_016627.1 868808 872333 D PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; manually curated; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric join(868808..872077,872079..872333) Clostridium clariflavum DSM 19732 11561125 YP_005045381.1 CDS Clocl_0757 NC_016627.1 872373 872540 R hypothetical protein complement(872373..872540) Clostridium clariflavum DSM 19732 11561126 YP_005045382.1 CDS Clocl_0758 NC_016627.1 872792 873757 D PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthase 872792..873757 Clostridium clariflavum DSM 19732 11561127 YP_005045383.1 CDS Clocl_0759 NC_016627.1 874091 874630 D PFAM: RNA 2'-phosphotransferase, Tpt1 / KptA family; RNA:NAD 2'-phosphotransferase 874091..874630 Clostridium clariflavum DSM 19732 11561128 YP_005045384.1 CDS Clocl_0760 NC_016627.1 874781 875959 D hypothetical protein 874781..875959 Clostridium clariflavum DSM 19732 11561129 YP_005045385.1 CDS Clocl_0761 NC_016627.1 876102 877325 D PFAM: Metallo-beta-lactamase superfamily; putative flavoprotein 876102..877325 Clostridium clariflavum DSM 19732 11561130 YP_005045386.1 CDS Clocl_0762 NC_016627.1 877507 878292 R PFAM: Putative esterase; putative esterase complement(877507..878292) Clostridium clariflavum DSM 19732 11561131 YP_005045387.1 CDS Clocl_0763 NC_016627.1 878727 880880 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 878727..880880 Clostridium clariflavum DSM 19732 11561132 YP_005045388.1 CDS Clocl_0764 NC_016627.1 881410 883563 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 881410..883563 Clostridium clariflavum DSM 19732 11561133 YP_005045389.1 CDS Clocl_0765 NC_016627.1 883801 885192 R PFAM: Transposase DDE domain; transposase family protein complement(883801..885192) Clostridium clariflavum DSM 19732 11561134 YP_005045390.1 CDS Clocl_0766 NC_016627.1 885634 886224 D PFAM: Accessory gene regulator B; manually curated; protein possibly involved in post-translational modification of quorum-sensing peptides 885634..886224 Clostridium clariflavum DSM 19732 11561135 YP_005045391.1 CDS Clocl_0767 NC_016627.1 886269 886412 D hypothetical protein 886269..886412 Clostridium clariflavum DSM 19732 11561136 YP_005045392.1 CDS Clocl_0768 NC_016627.1 886760 886945 R hypothetical protein complement(886760..886945) Clostridium clariflavum DSM 19732 11561137 YP_005045393.1 CDS Clocl_0769 NC_016627.1 887216 887911 D PFAM: ABC transporter; TIGRFAM: gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit; gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit 887216..887911 Clostridium clariflavum DSM 19732 11561138 YP_005045394.1 CDS Clocl_0770 NC_016627.1 887913 888671 D TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family; MutE/EpiE family lantibiotic protection ABC transporter permease 887913..888671 Clostridium clariflavum DSM 19732 11561139 YP_005045395.1 CDS Clocl_0771 NC_016627.1 888671 889447 D TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutG family; MutG family lantibiotic protection ABC transporter permease 888671..889447 Clostridium clariflavum DSM 19732 11561140 YP_005045396.1 CDS Clocl_0772 NC_016627.1 889471 890163 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 889471..890163 Clostridium clariflavum DSM 19732 11561141 YP_005045397.1 CDS Clocl_0773 NC_016627.1 890184 891614 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated; histidine kinase,HAMP domain-containing protein,histidine kinase 890184..891614 Clostridium clariflavum DSM 19732 11561142 YP_005045398.1 CDS Clocl_0774 NC_016627.1 891801 892802 R PFAM: Predicted nucleotidyltransferase; putative nucleotidyltransferase complement(891801..892802) Clostridium clariflavum DSM 19732 11561143 YP_005045399.1 CDS Clocl_0775 NC_016627.1 893228 894187 D hypothetical protein 893228..894187 Clostridium clariflavum DSM 19732 11561144 YP_005045400.1 CDS Clocl_0776 NC_016627.1 894278 894685 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytidine deaminase 894278..894685 Clostridium clariflavum DSM 19732 11561145 YP_005045401.1 CDS Clocl_0777 NC_016627.1 894780 895712 R PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit complement(894780..895712) Clostridium clariflavum DSM 19732 11561146 YP_005045402.1 CDS Clocl_0778 NC_016627.1 895991 896530 D hypothetical protein 895991..896530 Clostridium clariflavum DSM 19732 11561147 YP_005045403.1 CDS Clocl_0779 NC_016627.1 896655 897665 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; uroporphyrinogen-III decarboxylase complement(896655..897665) Clostridium clariflavum DSM 19732 11561148 YP_005045404.1 CDS Clocl_0780 NC_016627.1 898080 898718 D PFAM: B12 binding domain; putative cobalamin binding protein 898080..898718 Clostridium clariflavum DSM 19732 11561149 YP_005045405.1 CDS Clocl_0781 NC_016627.1 899069 900364 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 899069..900364 Clostridium clariflavum DSM 19732 11561150 YP_005045406.1 CDS Clocl_0782 NC_016627.1 900369 901301 R PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; putative GTPase, G3E family complement(900369..901301) Clostridium clariflavum DSM 19732 11561151 YP_005045407.1 CDS Clocl_0783 NC_016627.1 901398 902780 R PFAM: Methanol-cobalamin methyltransferase B subunit; methanol:corrinoid methyltransferase complement(901398..902780) Clostridium clariflavum DSM 19732 11561152 YP_005045408.1 CDS Clocl_0784 NC_016627.1 903106 903843 D PFAM: Protein of unknown function (DUF1638); hypothetical protein 903106..903843 Clostridium clariflavum DSM 19732 11561153 YP_005045409.1 CDS Clocl_0785 NC_016627.1 903904 904959 D PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 903904..904959 Clostridium clariflavum DSM 19732 11561154 YP_005045410.1 CDS Clocl_0786 NC_016627.1 905125 906933 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; putative metal-binding protein 905125..906933 Clostridium clariflavum DSM 19732 11561155 YP_005045411.1 CDS Clocl_0787 NC_016627.1 907020 908063 R PFAM: Bacterial regulatory proteins, lacI family; family; manually curated; transcriptional regulator complement(907020..908063) Clostridium clariflavum DSM 19732 11561156 YP_005045412.1 CDS Clocl_0788 NC_016627.1 908131 909036 R PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; sugar kinase complement(908131..909036) Clostridium clariflavum DSM 19732 11561157 YP_005045413.1 CDS Clocl_0789 NC_016627.1 909362 910609 D PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen-III decarboxylase 909362..910609 Clostridium clariflavum DSM 19732 11561158 YP_005045414.1 CDS Clocl_0790 NC_016627.1 910662 911672 D PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 910662..911672 Clostridium clariflavum DSM 19732 11561159 YP_005045415.1 CDS Clocl_0791 NC_016627.1 911790 912770 D PFAM: Branched-chain amino acid transport system / permease component; permease component of ribose/xylose/arabinose/galactoside ABC-type transporters 911790..912770 Clostridium clariflavum DSM 19732 11561160 YP_005045416.1 CDS Clocl_0792 NC_016627.1 912789 914276 D PFAM: ABC transporter; sugar ABC transporter ATPase 912789..914276 Clostridium clariflavum DSM 19732 11561161 YP_005045417.1 CDS Clocl_0793 NC_016627.1 914361 914768 D PFAM: RbsD / FucU transport protein family; ABC-type ribose transport system, auxiliary component 914361..914768 Clostridium clariflavum DSM 19732 11561162 YP_005045418.1 CDS Clocl_0794 NC_016627.1 915139 916194 D hypothetical protein 915139..916194 Clostridium clariflavum DSM 19732 11561163 YP_005045419.1 CDS Clocl_0795 NC_016627.1 916279 917538 D PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen-III decarboxylase 916279..917538 Clostridium clariflavum DSM 19732 11561164 YP_005045420.1 CDS Clocl_0796 NC_016627.1 918273 918425 D hypothetical protein 918273..918425 Clostridium clariflavum DSM 19732 11561165 YP_005045421.1 CDS Clocl_0797 NC_016627.1 918585 919775 D PFAM: Uncharacterized protein family UPF0027; hypothetical protein 918585..919775 Clostridium clariflavum DSM 19732 11561166 YP_005045422.1 CDS Clocl_0798 NC_016627.1 919789 920556 D PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 919789..920556 Clostridium clariflavum DSM 19732 11561167 YP_005045423.1 CDS Clocl_0799 NC_016627.1 920568 921479 D PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; RNAse Z 920568..921479 Clostridium clariflavum DSM 19732 11561168 YP_005045424.1 CDS Clocl_0800 NC_016627.1 921899 923242 D PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 921899..923242 Clostridium clariflavum DSM 19732 11561169 YP_005045425.1 CDS Clocl_0801 NC_016627.1 923300 924019 D PFAM: Region found in RelA / SpoT proteins; hypothetical protein 923300..924019 Clostridium clariflavum DSM 19732 11561170 YP_005045426.1 CDS Clocl_0802 NC_016627.1 924178 925239 D PFAM: Integrase core domain; transposase, IS30 family 924178..925239 Clostridium clariflavum DSM 19732 11561171 YP_005045427.1 CDS Clocl_0803 NC_016627.1 925592 927325 D PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease 925592..927325 Clostridium clariflavum DSM 19732 11561172 YP_005045428.1 CDS Clocl_0804 NC_016627.1 927327 929225 D PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease 927327..929225 Clostridium clariflavum DSM 19732 11561173 YP_005045429.1 CDS Clocl_0805 NC_016627.1 929412 930107 R PFAM: NPCBM/NEW2 domain; Copper amine oxidase N-terminal domain; manually curated; putative carbohydrate binding protein,copper amine oxidase family protein complement(929412..930107) Clostridium clariflavum DSM 19732 11561174 YP_005045430.1 CDS Clocl_0806 NC_016627.1 930367 932376 D PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; carbon-monoxide dehydrogenase, catalytic subunit 930367..932376 Clostridium clariflavum DSM 19732 11561175 YP_005045431.1 CDS Clocl_0807 NC_016627.1 932386 933378 D PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 932386..933378 Clostridium clariflavum DSM 19732 11561176 YP_005045432.1 CDS Clocl_0808 NC_016627.1 933378 934157 D PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 933378..934157 Clostridium clariflavum DSM 19732 11561177 YP_005045433.1 CDS Clocl_0809 NC_016627.1 934159 934929 D PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; nitrate/sulfonate/bicarbonate ABC transporter ATPase 934159..934929 Clostridium clariflavum DSM 19732 11561178 YP_005045434.1 CDS Clocl_0810 NC_016627.1 935061 935837 D hypothetical protein 935061..935837 Clostridium clariflavum DSM 19732 11561179 YP_005045435.1 CDS Clocl_0812 NC_016627.1 937071 937493 D hypothetical protein 937071..937493 Clostridium clariflavum DSM 19732 11561181 YP_005045436.1 CDS Clocl_0814 NC_016627.1 938089 938889 D hypothetical protein 938089..938889 Clostridium clariflavum DSM 19732 11561183 YP_005045437.1 CDS Clocl_0817 NC_016627.1 943972 944355 D hypothetical protein 943972..944355 Clostridium clariflavum DSM 19732 11561186 YP_005045438.1 CDS Clocl_0818 NC_016627.1 944540 945307 D hypothetical protein 944540..945307 Clostridium clariflavum DSM 19732 11561187 YP_005045439.1 CDS Clocl_0819 NC_016627.1 945581 946048 D hypothetical protein 945581..946048 Clostridium clariflavum DSM 19732 11561188 YP_005045440.1 CDS Clocl_0820 NC_016627.1 946041 947159 D hypothetical protein 946041..947159 Clostridium clariflavum DSM 19732 11561189 YP_005045441.1 CDS Clocl_0821 NC_016627.1 947170 949452 D PFAM: Bacterial Ig-like domain (group 2); Ig-like domain-containing surface protein 947170..949452 Clostridium clariflavum DSM 19732 11561190 YP_005045442.1 CDS Clocl_0822 NC_016627.1 949780 950823 D PFAM: Transposase domain (DUF772); transposase 949780..950823 Clostridium clariflavum DSM 19732 11561191 YP_005045443.1 CDS Clocl_0825 NC_016627.1 952818 954035 D PFAM: Transposase, Mutator family; transposase 952818..954035 Clostridium clariflavum DSM 19732 11561194 YP_005045444.1 CDS Clocl_0827 NC_016627.1 955108 955335 R PFAM: Tautomerase enzyme; 4-oxalocrotonate tautomerase complement(955108..955335) Clostridium clariflavum DSM 19732 11561196 YP_005045445.1 CDS Clocl_0828 NC_016627.1 955351 955908 R PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family; hypothetical protein complement(955351..955908) Clostridium clariflavum DSM 19732 11561197 YP_005045446.1 CDS Clocl_0829 NC_016627.1 955992 957302 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family complement(955992..957302) Clostridium clariflavum DSM 19732 11561198 YP_005045447.1 CDS Clocl_0832 NC_016627.1 960162 960476 D hypothetical protein 960162..960476 Clostridium clariflavum DSM 19732 11561201 YP_005045448.1 CDS Clocl_0833 NC_016627.1 960466 960897 D hypothetical protein 960466..960897 Clostridium clariflavum DSM 19732 11561202 YP_005045449.1 CDS Clocl_0834 NC_016627.1 960887 966920 D manually curated; hypothetical protein join(960887..964522,964524..966920) Clostridium clariflavum DSM 19732 11561203 YP_005045450.1 CDS Clocl_0835 NC_016627.1 966985 968247 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 966985..968247 Clostridium clariflavum DSM 19732 11561204 YP_005045451.1 CDS Clocl_0836 NC_016627.1 968307 968666 D hypothetical protein 968307..968666 Clostridium clariflavum DSM 19732 11561205 YP_005045452.1 CDS Clocl_0837 NC_016627.1 968794 969108 D hypothetical protein 968794..969108 Clostridium clariflavum DSM 19732 11561206 YP_005045453.1 CDS Clocl_0838 NC_016627.1 970112 970483 D hypothetical protein 970112..970483 Clostridium clariflavum DSM 19732 11561207 YP_005045454.1 CDS Clocl_0839 NC_016627.1 970829 971065 D hypothetical protein 970829..971065 Clostridium clariflavum DSM 19732 11561208 YP_005045455.1 CDS Clocl_0840 NC_016627.1 971234 971743 D hypothetical protein 971234..971743 Clostridium clariflavum DSM 19732 11561209 YP_005045456.1 CDS Clocl_0843 NC_016627.1 973035 973805 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(973035..973805) Clostridium clariflavum DSM 19732 11561212 YP_005045457.1 CDS Clocl_0844 NC_016627.1 973822 975287 R PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; manually curated; transposase complement(join(973822..974985,974985..975287)) Clostridium clariflavum DSM 19732 11561213 YP_005045458.1 CDS Clocl_0845 NC_016627.1 975642 976205 D PFAM: She9 / Mdm33 family; She9 / Mdm33 family 975642..976205 Clostridium clariflavum DSM 19732 11561214 YP_005045459.1 CDS Clocl_0847 NC_016627.1 977547 977885 D PFAM: HNH endonuclease; restriction endonuclease 977547..977885 Clostridium clariflavum DSM 19732 11561216 YP_005045460.1 CDS Clocl_0848 NC_016627.1 977908 978585 D hypothetical protein 977908..978585 Clostridium clariflavum DSM 19732 11561217 YP_005045461.1 CDS Clocl_0850 NC_016627.1 980584 980766 D hypothetical protein 980584..980766 Clostridium clariflavum DSM 19732 11561219 YP_005045462.1 CDS Clocl_0851 NC_016627.1 980763 980882 D hypothetical protein 980763..980882 Clostridium clariflavum DSM 19732 11561220 YP_005045463.1 CDS Clocl_0853 NC_016627.1 981929 982483 D hypothetical protein 981929..982483 Clostridium clariflavum DSM 19732 11561222 YP_005045464.1 CDS Clocl_0854 NC_016627.1 983241 983750 D PFAM: SMI1 / KNR4 family; putative glucan synthasis protein 983241..983750 Clostridium clariflavum DSM 19732 11561223 YP_005045465.1 CDS Clocl_0855 NC_016627.1 983985 985496 D PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 983985..985496 Clostridium clariflavum DSM 19732 11561224 YP_005045466.1 CDS Clocl_0856 NC_016627.1 985496 985819 D hypothetical protein 985496..985819 Clostridium clariflavum DSM 19732 11561225 YP_005045467.1 CDS Clocl_0857 NC_016627.1 985837 986163 D hypothetical protein 985837..986163 Clostridium clariflavum DSM 19732 11561226 YP_005045468.1 CDS Clocl_0858 NC_016627.1 986180 986479 D hypothetical protein 986180..986479 Clostridium clariflavum DSM 19732 11561227 YP_005045469.1 CDS Clocl_0859 NC_016627.1 986567 987931 D hypothetical protein 986567..987931 Clostridium clariflavum DSM 19732 11561228 YP_005045470.1 CDS Clocl_0860 NC_016627.1 987955 991158 D PFAM: FtsK/SpoIIIE family; manually curated; DNA segregation ATPase FtsK 987955..991158 Clostridium clariflavum DSM 19732 11561229 YP_005045471.1 CDS Clocl_0861 NC_016627.1 991146 992894 D PFAM: Archaeal ATPase; FtsK/SpoIIIE family; DNA segregation ATPase FtsK 991146..992894 Clostridium clariflavum DSM 19732 11561230 YP_005045472.1 CDS Clocl_0862 NC_016627.1 992908 993240 D hypothetical protein 992908..993240 Clostridium clariflavum DSM 19732 11561231 YP_005045473.1 CDS Clocl_0863 NC_016627.1 993272 993433 D hypothetical protein 993272..993433 Clostridium clariflavum DSM 19732 11561232 YP_005045474.1 CDS Clocl_0864 NC_016627.1 993847 994473 D PFAM: Nitroreductase family; nitroreductase 993847..994473 Clostridium clariflavum DSM 19732 11561233 YP_005045475.1 CDS Clocl_0865 NC_016627.1 994645 995175 R PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; isopentenyl-diphosphate delta-isomerase complement(994645..995175) Clostridium clariflavum DSM 19732 11561234 YP_005045476.1 CDS Clocl_0866 NC_016627.1 995218 996360 R PFAM: Aromatic prenyltransferase Orf2; Aromatic prenyltransferase Orf2 complement(995218..996360) Clostridium clariflavum DSM 19732 11561235 YP_005045477.1 CDS Clocl_0867 NC_016627.1 997182 997745 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; peroxiredoxin 997182..997745 Clostridium clariflavum DSM 19732 11561236 YP_005045478.1 CDS Clocl_0868 NC_016627.1 997758 999287 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; alkyl hydroperoxide reductase 997758..999287 Clostridium clariflavum DSM 19732 11561237 YP_005045479.1 CDS Clocl_0869 NC_016627.1 999366 1000127 D PFAM: Transposase IS200 like; transposase 999366..1000127 Clostridium clariflavum DSM 19732 11561238 YP_005045480.1 CDS Clocl_0870 NC_016627.1 1000168 1001718 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(1000168..1001718) Clostridium clariflavum DSM 19732 11561239 YP_005045481.1 CDS Clocl_0871 NC_016627.1 1001933 1003558 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein complement(1001933..1003558) Clostridium clariflavum DSM 19732 11561240 YP_005045482.1 CDS Clocl_0872 NC_016627.1 1003731 1004759 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(1003731..1004759) Clostridium clariflavum DSM 19732 11561241 YP_005045483.1 CDS Clocl_0873 NC_016627.1 1004752 1005759 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(1004752..1005759) Clostridium clariflavum DSM 19732 11561242 YP_005045484.1 CDS Clocl_0874 NC_016627.1 1005827 1006822 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(1005827..1006822) Clostridium clariflavum DSM 19732 11561243 YP_005045485.1 CDS Clocl_0875 NC_016627.1 1006975 1007898 R PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease complement(1006975..1007898) Clostridium clariflavum DSM 19732 11561244 YP_005045486.1 CDS Clocl_0877 NC_016627.1 1009931 1010494 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; peroxiredoxin 1009931..1010494 Clostridium clariflavum DSM 19732 11561246 YP_005045487.1 CDS Clocl_0880 NC_016627.1 1014392 1014583 D hypothetical protein 1014392..1014583 Clostridium clariflavum DSM 19732 11561249 YP_005045488.1 CDS Clocl_0882 NC_016627.1 1017131 1017526 D hypothetical protein 1017131..1017526 Clostridium clariflavum DSM 19732 11561251 YP_005045489.1 CDS Clocl_0883 NC_016627.1 1017624 1017806 D hypothetical protein 1017624..1017806 Clostridium clariflavum DSM 19732 11561252 YP_005045490.1 CDS Clocl_0884 NC_016627.1 1017844 1018989 D PFAM: Peptidase family M50; Peptidase family M50 1017844..1018989 Clostridium clariflavum DSM 19732 11561253 YP_005045491.1 CDS Clocl_0885 NC_016627.1 1019955 1020431 D manually curated; hypothetical protein 1019955..1020431 Clostridium clariflavum DSM 19732 11561254 YP_005045492.1 CDS Clocl_0886 NC_016627.1 1020424 1021446 D hypothetical protein 1020424..1021446 Clostridium clariflavum DSM 19732 11561255 YP_005045493.1 CDS Clocl_0888 NC_016627.1 1022917 1023687 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1022917..1023687 Clostridium clariflavum DSM 19732 11561257 YP_005045494.1 CDS Clocl_0889 NC_016627.1 1023684 1026296 D hypothetical protein 1023684..1026296 Clostridium clariflavum DSM 19732 11561258 YP_005045495.1 CDS Clocl_0890 NC_016627.1 1026382 1027329 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1026382..1027329 Clostridium clariflavum DSM 19732 11561259 YP_005045496.1 CDS Clocl_0891 NC_016627.1 1028125 1029369 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; Retron-type reverse transcriptase 1028125..1029369 Clostridium clariflavum DSM 19732 11561260 YP_005045497.1 CDS Clocl_0893 NC_016627.1 1029561 1029845 R hypothetical protein complement(1029561..1029845) Clostridium clariflavum DSM 19732 11561262 YP_005045498.1 CDS Clocl_0895 NC_016627.1 1031515 1031868 R PFAM: IS66 Orf2 like protein; transposase complement(1031515..1031868) Clostridium clariflavum DSM 19732 11561264 YP_005045499.1 CDS Clocl_0896 NC_016627.1 1031865 1032218 R PFAM: Transposase; Transposase complement(1031865..1032218) Clostridium clariflavum DSM 19732 11561265 YP_005045500.1 CDS Clocl_0897 NC_016627.1 1032426 1035365 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(1032426..1035365) Clostridium clariflavum DSM 19732 11561266 YP_005045501.1 CDS Clocl_0899 NC_016627.1 1036767 1037390 D PFAM: Bacterial transcription activator, effector binding domain; Uncharacterized conserved protein (DUF2174); hypothetical protein 1036767..1037390 Clostridium clariflavum DSM 19732 11561268 YP_005045502.1 CDS Clocl_0900 NC_016627.1 1037414 1037851 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 1037414..1037851 Clostridium clariflavum DSM 19732 11561269 YP_005045503.1 CDS Clocl_0901 NC_016627.1 1037940 1039712 R PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; beta-mannanase complement(1037940..1039712) Clostridium clariflavum DSM 19732 11561270 YP_005045504.1 CDS Clocl_0902 NC_016627.1 1040210 1041109 R PFAM: Integrase core domain; transposase complement(1040210..1041109) Clostridium clariflavum DSM 19732 11561271 YP_005045505.1 CDS Clocl_0903 NC_016627.1 1041069 1041362 R PFAM: Transposase; transposase complement(1041069..1041362) Clostridium clariflavum DSM 19732 11561272 YP_005045506.1 CDS Clocl_0904 NC_016627.1 1041633 1041998 D PFAM: Penicillinase repressor; putative transcriptional regulator 1041633..1041998 Clostridium clariflavum DSM 19732 11561273 YP_005045507.1 CDS Clocl_0905 NC_016627.1 1042084 1043856 D PFAM: Flavin containing amine oxidoreductase; monoamine oxidase 1042084..1043856 Clostridium clariflavum DSM 19732 11561274 YP_005045508.1 CDS Clocl_0906 NC_016627.1 1043912 1046593 R PFAM: BNR/Asp-box repeat; BNR/Asp-box repeat-containing protein complement(1043912..1046593) Clostridium clariflavum DSM 19732 11561275 YP_005045509.1 CDS Clocl_0907 NC_016627.1 1047160 1049379 D PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 1047160..1049379 Clostridium clariflavum DSM 19732 11561276 YP_005045510.1 CDS Clocl_0908 NC_016627.1 1049389 1050108 D PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase 1-activating enzyme 1049389..1050108 Clostridium clariflavum DSM 19732 11561277 YP_005045511.1 CDS Clocl_0909 NC_016627.1 1050197 1051051 D PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter family protein 1050197..1051051 Clostridium clariflavum DSM 19732 11561278 YP_005045512.1 CDS Clocl_0910 NC_016627.1 1051193 1051849 D hypothetical protein 1051193..1051849 Clostridium clariflavum DSM 19732 11561279 YP_005045513.1 CDS Clocl_0911 NC_016627.1 1051958 1054108 R PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; ferrous iron transporter FeoB complement(1051958..1054108) Clostridium clariflavum DSM 19732 11561280 YP_005045514.1 CDS Clocl_0912 NC_016627.1 1054496 1055308 D PFAM: ZIP Zinc transporter; putative divalent heavy-metal cations transporter 1054496..1055308 Clostridium clariflavum DSM 19732 11561281 YP_005045515.1 CDS Clocl_0913 NC_016627.1 1055552 1056406 D PFAM: Uracil DNA glycosylase superfamily; G:T/U mismatch-specific DNA glycosylase 1055552..1056406 Clostridium clariflavum DSM 19732 11561282 YP_005045516.1 CDS Clocl_0914 NC_016627.1 1056567 1057061 D PFAM: Rubrerythrin; rubrerythrin 1056567..1057061 Clostridium clariflavum DSM 19732 11561283 YP_005045517.1 CDS Clocl_0915 NC_016627.1 1057260 1059887 R PFAM: Topoisomerase DNA binding C4 zinc finger; manually curated; topoisomerase-like C4 zinc finger-containing protein complement(1057260..1059887) Clostridium clariflavum DSM 19732 11561284 YP_005045518.1 CDS Clocl_0916 NC_016627.1 1060090 1061480 D PFAM: Transposase DDE domain; manually curated; transposase family protein join(1060090..1060890,1060890..1061480) Clostridium clariflavum DSM 19732 11561285 YP_005045519.1 CDS Clocl_0917 NC_016627.1 1061732 1063513 D PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase; hydroxylamine reductase 1061732..1063513 Clostridium clariflavum DSM 19732 11561286 YP_005045520.1 CDS Clocl_0918 NC_016627.1 1063705 1064244 D PFAM: HD domain; putative HD superfamily hydrolase involved in NAD metabolism 1063705..1064244 Clostridium clariflavum DSM 19732 11561287 YP_005045521.1 CDS Clocl_0919 NC_016627.1 1064601 1065512 D PFAM: FMN-dependent dehydrogenase; alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase 1064601..1065512 Clostridium clariflavum DSM 19732 11561288 YP_005045522.1 CDS Clocl_0920 NC_016627.1 1065549 1066385 D PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase 1065549..1066385 Clostridium clariflavum DSM 19732 11561289 YP_005045523.1 CDS Clocl_0921 NC_016627.1 1066514 1066912 R hypothetical protein complement(1066514..1066912) Clostridium clariflavum DSM 19732 11561290 YP_005045524.1 CDS Clocl_0922 NC_016627.1 1067202 1067648 D hypothetical protein 1067202..1067648 Clostridium clariflavum DSM 19732 11561291 YP_005045525.1 CDS Clocl_0923 NC_016627.1 1068026 1069771 D PFAM: Dockerin type I repeat; Pectinesterase; Carbohydrate binding module (family 6); pectin methylesterase 1068026..1069771 Clostridium clariflavum DSM 19732 11561292 YP_005045526.1 CDS Clocl_0924 NC_016627.1 1070071 1072221 D PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; helicase, putative, RecD/TraA family; helicase, putative, RecD/TraA family 1070071..1072221 Clostridium clariflavum DSM 19732 11561293 YP_005045527.1 CDS Clocl_0925 NC_016627.1 1072333 1072926 R PFAM: Cupin domain; mannose-6-phosphate isomerase complement(1072333..1072926) Clostridium clariflavum DSM 19732 11561294 YP_005045528.1 CDS Clocl_0926 NC_016627.1 1073015 1073314 R hypothetical protein complement(1073015..1073314) Clostridium clariflavum DSM 19732 11561295 YP_005045529.1 CDS Clocl_0927 NC_016627.1 1073648 1076230 D PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; phosphoenolpyruvate synthase 1073648..1076230 Clostridium clariflavum DSM 19732 11561296 YP_005045530.1 CDS Clocl_0928 NC_016627.1 1076344 1077519 D PFAM: Iron-containing alcohol dehydrogenase; Fe-dependent oxidoreductase, alcohol dehydrogenase 1076344..1077519 Clostridium clariflavum DSM 19732 11561297 YP_005045531.1 CDS Clocl_0929 NC_016627.1 1077760 1079379 D PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol-1-phosphate/altronate dehydrogenase 1077760..1079379 Clostridium clariflavum DSM 19732 11561298 YP_005045532.1 CDS Clocl_0930 NC_016627.1 1079428 1081521 D PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; alpha-glucuronidase 1079428..1081521 Clostridium clariflavum DSM 19732 11561299 YP_005045533.1 CDS Clocl_0931 NC_016627.1 1081493 1081591 D hypothetical protein 1081493..1081591 Clostridium clariflavum DSM 19732 11561300 YP_005045534.1 CDS Clocl_0932 NC_016627.1 1081648 1083813 R PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; sugar ABC transporter periplasmic protein complement(1081648..1083813) Clostridium clariflavum DSM 19732 11561301 YP_005045535.1 CDS Clocl_0933 NC_016627.1 1084273 1086846 D PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 1084273..1086846 Clostridium clariflavum DSM 19732 11561302 YP_005045536.1 CDS Clocl_0934 NC_016627.1 1087080 1087520 D PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 1087080..1087520 Clostridium clariflavum DSM 19732 11561303 YP_005045537.1 CDS Clocl_0935 NC_016627.1 1087599 1087904 D PFAM: Uncharacterized protein conserved in bacteria (DUF2325); ABC transporter substrate-binding protein 1087599..1087904 Clostridium clariflavum DSM 19732 11561304 YP_005045538.1 CDS Clocl_0936 NC_016627.1 1087946 1088377 D PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain; flavodoxin, short chain 1087946..1088377 Clostridium clariflavum DSM 19732 11561305 YP_005045539.1 CDS Clocl_0937 NC_016627.1 1088652 1089272 D hypothetical protein 1088652..1089272 Clostridium clariflavum DSM 19732 11561306 YP_005045540.1 CDS Clocl_0938 NC_016627.1 1089856 1092387 D PFAM: AMP-binding enzyme; Xylose isomerase-like TIM barrel; acyl-CoA synthetase 1089856..1092387 Clostridium clariflavum DSM 19732 11561307 YP_005045541.1 CDS Clocl_0939 NC_016627.1 1092701 1093300 D PFAM: Nitroreductase family; nitroreductase-like oxidoreductase 1092701..1093300 Clostridium clariflavum DSM 19732 11561308 YP_005045542.1 CDS Clocl_0940 NC_016627.1 1093543 1094103 D hypothetical protein 1093543..1094103 Clostridium clariflavum DSM 19732 11561309 YP_005045543.1 CDS Clocl_0941 NC_016627.1 1094191 1095407 D PFAM: Transposase, Mutator family; manually curated; transposase join(1094191..1094403,1094403..1095407) Clostridium clariflavum DSM 19732 11561310 YP_005045544.1 CDS Clocl_0942 NC_016627.1 1095656 1096252 D hypothetical protein 1095656..1096252 Clostridium clariflavum DSM 19732 11561311 YP_005045545.1 CDS Clocl_0943 NC_016627.1 1096390 1098030 R PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase complement(1096390..1098030) Clostridium clariflavum DSM 19732 11561312 YP_005045546.1 CDS Clocl_0944 NC_016627.1 1098238 1099371 R hypothetical protein complement(1098238..1099371) Clostridium clariflavum DSM 19732 11561313 YP_005045547.1 CDS Clocl_0945 NC_016627.1 1099745 1100566 D PFAM: Protein of unknown function, DUF624; manually curated; putative integral membrane protein 1099745..1100566 Clostridium clariflavum DSM 19732 11561314 YP_005045548.1 CDS Clocl_0946 NC_016627.1 1100678 1101853 D PFAM: GDSL-like Lipase/Acylhydrolase; lysophospholipase L1-like esterase 1100678..1101853 Clostridium clariflavum DSM 19732 11561315 YP_005045549.1 CDS Clocl_0947 NC_016627.1 1101986 1102453 D PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 1101986..1102453 Clostridium clariflavum DSM 19732 11561316 YP_005045550.1 CDS Clocl_0948 NC_016627.1 1102600 1104978 D PFAM: Clostripain family; clostripain family protease 1102600..1104978 Clostridium clariflavum DSM 19732 11561317 YP_005045551.1 CDS Clocl_0949 NC_016627.1 1105028 1105300 D PFAM: TfoX C-terminal domain; TfoX C-terminal domain-containing protein 1105028..1105300 Clostridium clariflavum DSM 19732 11561318 YP_005045552.1 CDS Clocl_0950 NC_016627.1 1105768 1105986 D hypothetical protein 1105768..1105986 Clostridium clariflavum DSM 19732 11561319 YP_005045553.1 CDS Clocl_0951 NC_016627.1 1105965 1107365 D PFAM: Nickel-dependent hydrogenase; Ni,Fe-hydrogenase I large subunit 1105965..1107365 Clostridium clariflavum DSM 19732 11561320 YP_005045554.1 CDS Clocl_0952 NC_016627.1 1107629 1109287 D PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; hypothetical protein 1107629..1109287 Clostridium clariflavum DSM 19732 11561321 YP_005045555.1 CDS Clocl_0953 NC_016627.1 1109490 1110149 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein 1109490..1110149 Clostridium clariflavum DSM 19732 11561322 YP_005045556.1 CDS Clocl_0954 NC_016627.1 1110547 1111797 D PFAM: Major Facilitator Superfamily; sugar phosphate permease 1110547..1111797 Clostridium clariflavum DSM 19732 11561323 YP_005045557.1 CDS Clocl_0955 NC_016627.1 1112196 1113161 D PFAM: Dihydrouridine synthase (Dus); tRNA-dihydrouridine synthase 1112196..1113161 Clostridium clariflavum DSM 19732 11561324 YP_005045558.1 CDS Clocl_0956 NC_016627.1 1113314 1113514 D PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 1113314..1113514 Clostridium clariflavum DSM 19732 11561325 YP_005045559.1 CDS Clocl_0957 NC_016627.1 1113935 1114525 D PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC; putative sporulation protein YyaC 1113935..1114525 Clostridium clariflavum DSM 19732 11561326 YP_005045560.1 CDS Clocl_0958 NC_016627.1 1114658 1115146 D PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybaK/ebsC protein 1114658..1115146 Clostridium clariflavum DSM 19732 11561327 YP_005045561.1 CDS Clocl_0959 NC_016627.1 1115154 1115825 R PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(1115154..1115825) Clostridium clariflavum DSM 19732 11561328 YP_005045562.1 CDS Clocl_0960 NC_016627.1 1116149 1116529 D PFAM: Protein of unknown function (DUF2809); hypothetical protein 1116149..1116529 Clostridium clariflavum DSM 19732 11561329 YP_005045563.1 CDS Clocl_0961 NC_016627.1 1116676 1117605 D hypothetical protein 1116676..1117605 Clostridium clariflavum DSM 19732 11561330 YP_005045564.1 CDS Clocl_0963 NC_016627.1 1117919 1118221 R PFAM: Branched-chain amino acid transport protein (AzlD); hypothetical protein complement(1117919..1118221) Clostridium clariflavum DSM 19732 11561332 YP_005045565.1 CDS Clocl_0964 NC_016627.1 1118226 1118948 R PFAM: AzlC protein; putative branched-chain amino acid permease (azaleucine resistance) complement(1118226..1118948) Clostridium clariflavum DSM 19732 11561333 YP_005045566.1 CDS Clocl_0965 NC_016627.1 1119212 1121299 R PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; inorganic pyrophosphatase complement(1119212..1121299) Clostridium clariflavum DSM 19732 11561334 YP_005045567.1 CDS Clocl_0966 NC_016627.1 1122046 1123230 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 1122046..1123230 Clostridium clariflavum DSM 19732 11561335 YP_005045568.1 CDS Clocl_0967 NC_016627.1 1123223 1123993 D PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 1123223..1123993 Clostridium clariflavum DSM 19732 11561336 YP_005045569.1 CDS Clocl_0968 NC_016627.1 1124324 1124689 D PFAM: Phage derived protein Gp49-like (DUF891); phage-like protein 1124324..1124689 Clostridium clariflavum DSM 19732 11561337 YP_005045570.1 CDS Clocl_0969 NC_016627.1 1124682 1124966 D PFAM: Helix-turn-helix; putative transcriptional regulator 1124682..1124966 Clostridium clariflavum DSM 19732 11561338 YP_005045571.1 CDS Clocl_0970 NC_016627.1 1125335 1127638 D manually curated; hypothetical protein 1125335..1127638 Clostridium clariflavum DSM 19732 11561339 YP_005045572.1 CDS Clocl_0971 NC_016627.1 1128044 1129342 D PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein 1128044..1129342 Clostridium clariflavum DSM 19732 11561340 YP_005045573.1 CDS Clocl_0972 NC_016627.1 1129784 1130179 D hypothetical protein 1129784..1130179 Clostridium clariflavum DSM 19732 11561341 YP_005045574.1 CDS Clocl_0973 NC_016627.1 1131018 1131509 D PFAM: CheW-like domain; chemotaxis signal transduction protein 1131018..1131509 Clostridium clariflavum DSM 19732 11561342 YP_005045575.1 CDS Clocl_0974 NC_016627.1 1131641 1133500 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 1131641..1133500 Clostridium clariflavum DSM 19732 11561343 YP_005045576.1 CDS Clocl_0975 NC_016627.1 1133759 1135450 D PFAM: MutS domain V; mismatch repair ATPase (MutS family) 1133759..1135450 Clostridium clariflavum DSM 19732 11561344 YP_005045577.1 CDS Clocl_0976 NC_016627.1 1135461 1137149 D PFAM: MutS domain V; mismatch repair ATPase (MutS family) 1135461..1137149 Clostridium clariflavum DSM 19732 11561345 YP_005045578.1 CDS Clocl_0977 NC_016627.1 1137653 1139536 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit 1137653..1139536 Clostridium clariflavum DSM 19732 11561346 YP_005045579.1 CDS Clocl_0978 NC_016627.1 1139589 1140440 D PFAM: NADH dehydrogenase; formate hydrogenlyase subunit 4 1139589..1140440 Clostridium clariflavum DSM 19732 11561347 YP_005045580.1 CDS Clocl_0979 NC_016627.1 1140452 1140886 D PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; Ni,Fe-hydrogenase III small subunit 1140452..1140886 Clostridium clariflavum DSM 19732 11561348 YP_005045581.1 CDS Clocl_0980 NC_016627.1 1140915 1141259 D PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH:ubiquinone oxidoreductase 27 kD subunit 1140915..1141259 Clostridium clariflavum DSM 19732 11561349 YP_005045582.1 CDS Clocl_0981 NC_016627.1 1141291 1142370 D PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; Ni,Fe-hydrogenase III large subunit 1141291..1142370 Clostridium clariflavum DSM 19732 11561350 YP_005045583.1 CDS Clocl_0982 NC_016627.1 1142375 1142740 D PFAM: 4Fe-4S binding domain; NADH:ubiquinone oxidoreductase chain I-like protein 1142375..1142740 Clostridium clariflavum DSM 19732 11561351 YP_005045584.1 CDS Clocl_0983 NC_016627.1 1142706 1143053 D PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1142706..1143053 Clostridium clariflavum DSM 19732 11561352 YP_005045585.1 CDS Clocl_0984 NC_016627.1 1143134 1143784 D PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1143134..1143784 Clostridium clariflavum DSM 19732 11561353 YP_005045586.1 CDS Clocl_0985 NC_016627.1 1143784 1146123 D PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 1143784..1146123 Clostridium clariflavum DSM 19732 11561354 YP_005045587.1 CDS Clocl_0986 NC_016627.1 1146145 1146360 D PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1146145..1146360 Clostridium clariflavum DSM 19732 11561355 YP_005045588.1 CDS Clocl_0987 NC_016627.1 1146360 1147409 D PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 1146360..1147409 Clostridium clariflavum DSM 19732 11561356 YP_005045589.1 CDS Clocl_0988 NC_016627.1 1147434 1148432 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1147434..1148432 Clostridium clariflavum DSM 19732 11561357 YP_005045590.1 CDS Clocl_0989 NC_016627.1 1148517 1149431 D PFAM: NUDIX domain; ADP-ribose pyrophosphatase 1148517..1149431 Clostridium clariflavum DSM 19732 11561358 YP_005045591.1 CDS Clocl_0990 NC_016627.1 1149456 1150130 D PFAM: Isochorismatase family; nicotinamidase-like amidase 1149456..1150130 Clostridium clariflavum DSM 19732 11561359 YP_005045592.1 CDS Clocl_0991 NC_016627.1 1150184 1151626 D PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase; putative nicotinate phosphoribosyltransferase 1150184..1151626 Clostridium clariflavum DSM 19732 11561360 YP_005045593.1 CDS Clocl_0992 NC_016627.1 1152099 1153901 D PFAM: Phosphoenolpyruvate carboxykinase; phosphoenolpyruvate carboxykinase (GTP) 1152099..1153901 Clostridium clariflavum DSM 19732 11561361 YP_005045594.1 CDS Clocl_0993 NC_016627.1 1153980 1154927 R manually curated; hypothetical protein complement(1153980..1154927) Clostridium clariflavum DSM 19732 11561362 YP_005045595.1 CDS Clocl_0994 NC_016627.1 1155032 1155787 R hypothetical protein complement(1155032..1155787) Clostridium clariflavum DSM 19732 11561363 YP_005045596.1 CDS Clocl_0995 NC_016627.1 1155781 1156761 R hypothetical protein complement(1155781..1156761) Clostridium clariflavum DSM 19732 11561364 YP_005045597.1 CDS Clocl_0996 NC_016627.1 1156993 1158183 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta complement(1156993..1158183) Clostridium clariflavum DSM 19732 11561365 YP_005045598.1 CDS Clocl_0997 NC_016627.1 1158546 1159445 D PFAM: Copper amine oxidase N-terminal domain; Cell Wall Hydrolase; copper amine oxidase family protein 1158546..1159445 Clostridium clariflavum DSM 19732 11561366 YP_005045599.1 CDS Clocl_0998 NC_016627.1 1159826 1160797 D PFAM: Periplasmic solute binding protein family; ABC-type metal ion transport system, periplasmic component/surface adhesin 1159826..1160797 Clostridium clariflavum DSM 19732 11561367 YP_005045600.1 CDS Clocl_0999 NC_016627.1 1160794 1161594 D PFAM: ABC transporter; ATPase component of Mn/Zn ABC-type transporter 1160794..1161594 Clostridium clariflavum DSM 19732 11561368 YP_005045601.1 CDS Clocl_1000 NC_016627.1 1161591 1162436 D PFAM: ABC 3 transport family; ABC-type Mn2+/Zn2+ transport system, permease component 1161591..1162436 Clostridium clariflavum DSM 19732 11561369 YP_005045602.1 CDS Clocl_1001 NC_016627.1 1162490 1164838 D PFAM: Copper amine oxidase N-terminal domain; Transglutaminase-like superfamily; Leucine Rich Repeat; copper amine oxidase family protein,Leucine Rich Repeat (LRR)-containing protein,Transglutaminase-like superfamily protein 1162490..1164838 Clostridium clariflavum DSM 19732 11561370 YP_005045603.1 CDS Clocl_1002 NC_016627.1 1164992 1165720 D PFAM: ABC transporter; multidrug ABC transporter ATPase 1164992..1165720 Clostridium clariflavum DSM 19732 11561371 YP_005045604.1 CDS Clocl_1003 NC_016627.1 1165710 1167374 D hypothetical protein 1165710..1167374 Clostridium clariflavum DSM 19732 11561372 YP_005045605.1 CDS Clocl_1004 NC_016627.1 1167377 1168096 R PFAM: PHP domain; capsular polysaccharide biosynthesis protein complement(1167377..1168096) Clostridium clariflavum DSM 19732 11561373 YP_005045606.1 CDS Clocl_1005 NC_016627.1 1168089 1168829 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide biosynthesis protein complement(1168089..1168829) Clostridium clariflavum DSM 19732 11561374 YP_005045607.1 CDS Clocl_1006 NC_016627.1 1168843 1169511 R PFAM: Chain length determinant protein; capsular polysaccharide biosynthesis protein complement(1168843..1169511) Clostridium clariflavum DSM 19732 11561375 YP_005045608.1 CDS Clocl_1007 NC_016627.1 1169681 1170013 R hypothetical protein complement(1169681..1170013) Clostridium clariflavum DSM 19732 11561376 YP_005045609.1 CDS Clocl_1008 NC_016627.1 1170302 1172146 D PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase 1170302..1172146 Clostridium clariflavum DSM 19732 11561377 YP_005045610.1 CDS Clocl_1009 NC_016627.1 1172156 1172392 D hypothetical protein 1172156..1172392 Clostridium clariflavum DSM 19732 11561378 YP_005045611.1 CDS Clocl_1010 NC_016627.1 1172428 1173186 D PFAM: short chain dehydrogenase; dehydrogenase 1172428..1173186 Clostridium clariflavum DSM 19732 11561379 YP_005045612.1 CDS Clocl_1011 NC_016627.1 1173198 1173857 D PFAM: Bacterial sugar transferase; glycosyl transferase 1173198..1173857 Clostridium clariflavum DSM 19732 11561380 YP_005045613.1 CDS Clocl_1012 NC_016627.1 1173907 1174764 D PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 1173907..1174764 Clostridium clariflavum DSM 19732 11561381 YP_005045614.1 CDS Clocl_1013 NC_016627.1 1174761 1175690 D PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase 1174761..1175690 Clostridium clariflavum DSM 19732 11561382 YP_005045615.1 CDS Clocl_1014 NC_016627.1 1175690 1176460 D PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 1175690..1176460 Clostridium clariflavum DSM 19732 11561383 YP_005045616.1 CDS Clocl_1015 NC_016627.1 1176566 1177732 D PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 1176566..1177732 Clostridium clariflavum DSM 19732 11561384 YP_005045617.1 CDS Clocl_1016 NC_016627.1 1177797 1178882 D manually curated; hypothetical protein 1177797..1178882 Clostridium clariflavum DSM 19732 11561385 YP_005045618.1 CDS Clocl_1017 NC_016627.1 1178923 1180209 D PFAM: O-Antigen ligase; O-Antigen ligase 1178923..1180209 Clostridium clariflavum DSM 19732 11561386 YP_005045619.1 CDS Clocl_1018 NC_016627.1 1180206 1181057 D PFAM: LICD Protein Family; LPS biosynthesis protein 1180206..1181057 Clostridium clariflavum DSM 19732 11561387 YP_005045620.1 CDS Clocl_1019 NC_016627.1 1181390 1182133 D PFAM: Nucleotidyl transferase; putative sugar nucleotidyltransferase 1181390..1182133 Clostridium clariflavum DSM 19732 11561388 YP_005045621.1 CDS Clocl_1020 NC_016627.1 1182233 1183240 D PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase 1182233..1183240 Clostridium clariflavum DSM 19732 11561389 YP_005045622.1 CDS Clocl_1021 NC_016627.1 1183259 1184347 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis 1183259..1184347 Clostridium clariflavum DSM 19732 11561390 YP_005045623.1 CDS Clocl_1022 NC_016627.1 1184352 1185413 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis 1184352..1185413 Clostridium clariflavum DSM 19732 11561391 YP_005045624.1 CDS Clocl_1023 NC_016627.1 1185404 1185919 D PFAM: Acetyltransferase (GNAT) family; putative acyltransferase 1185404..1185919 Clostridium clariflavum DSM 19732 11561392 YP_005045625.1 CDS Clocl_1024 NC_016627.1 1185922 1186932 D PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 1185922..1186932 Clostridium clariflavum DSM 19732 11561393 YP_005045626.1 CDS Clocl_1025 NC_016627.1 1186956 1188446 D PFAM: Polysaccharide biosynthesis protein; manually curated; membrane protein involved in the export of O-antigen and teichoic acid 1186956..1188446 Clostridium clariflavum DSM 19732 11561394 YP_005045627.1 CDS Clocl_1026 NC_016627.1 1188630 1190816 D PFAM: S-layer homology domain; zinc metalloprotease 1188630..1190816 Clostridium clariflavum DSM 19732 11561395 YP_005045628.1 CDS Clocl_1027 NC_016627.1 1190888 1191691 R PFAM: short chain dehydrogenase; dehydrogenase complement(1190888..1191691) Clostridium clariflavum DSM 19732 11561396 YP_005045629.1 CDS Clocl_1028 NC_016627.1 1192248 1194650 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 1192248..1194650 Clostridium clariflavum DSM 19732 11561397 YP_005045630.1 CDS Clocl_1029 NC_016627.1 1194899 1196767 D PFAM: Endonuclease/Exonuclease/phosphatase family; manually curated; hypothetical protein 1194899..1196767 Clostridium clariflavum DSM 19732 11561398 YP_005045631.1 CDS Clocl_1030 NC_016627.1 1196906 1197472 D PFAM: Rhomboid family; hypothetical protein 1196906..1197472 Clostridium clariflavum DSM 19732 11561399 YP_005045632.1 CDS Clocl_1031 NC_016627.1 1197687 1199822 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; family; transcriptional regulator 1197687..1199822 Clostridium clariflavum DSM 19732 11561400 YP_005045633.1 CDS Clocl_1032 NC_016627.1 1199944 1202472 D PFAM: Transglutaminase-like superfamily; transglutaminase 1199944..1202472 Clostridium clariflavum DSM 19732 11561401 YP_005045634.1 CDS Clocl_1033 NC_016627.1 1202499 1203650 D manually curated; hypothetical protein 1202499..1203650 Clostridium clariflavum DSM 19732 11561402 YP_005045635.1 CDS Clocl_1034 NC_016627.1 1203598 1204596 D PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 1203598..1204596 Clostridium clariflavum DSM 19732 11561403 YP_005045636.1 CDS Clocl_1035 NC_016627.1 1204597 1205919 D PFAM: Protein of unknown function DUF58; hypothetical protein 1204597..1205919 Clostridium clariflavum DSM 19732 11561404 YP_005045637.1 CDS Clocl_1036 NC_016627.1 1205916 1206527 D hypothetical protein 1205916..1206527 Clostridium clariflavum DSM 19732 11561405 YP_005045638.1 CDS Clocl_1037 NC_016627.1 1206782 1207483 D hypothetical protein 1206782..1207483 Clostridium clariflavum DSM 19732 11561406 YP_005045639.1 CDS Clocl_1038 NC_016627.1 1207619 1208203 R PFAM: Desulfoferrodoxin; Helix-turn-helix; putative transcriptional regulator complement(1207619..1208203) Clostridium clariflavum DSM 19732 11561407 YP_005045640.1 CDS Clocl_1039 NC_016627.1 1208541 1209908 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 1208541..1209908 Clostridium clariflavum DSM 19732 11561408 YP_005045641.1 CDS Clocl_1040 NC_016627.1 1210012 1210764 R PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(1210012..1210764) Clostridium clariflavum DSM 19732 11561409 YP_005045642.1 CDS Clocl_1041 NC_016627.1 1210774 1211805 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(1210774..1211805) Clostridium clariflavum DSM 19732 11561410 YP_005045643.1 CDS Clocl_1042 NC_016627.1 1211811 1212572 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(1211811..1212572) Clostridium clariflavum DSM 19732 11561411 YP_005045644.1 CDS Clocl_1043 NC_016627.1 1212547 1212834 R PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family; hypothetical protein complement(1212547..1212834) Clostridium clariflavum DSM 19732 11561412 YP_005045645.1 CDS Clocl_1044 NC_016627.1 1213357 1216191 D PFAM: S-layer homology domain; beta-propeller domain-containing protein, methanol dehydrogenase 1213357..1216191 Clostridium clariflavum DSM 19732 11561413 YP_005045646.1 CDS Clocl_1045 NC_016627.1 1216498 1217034 D hypothetical protein 1216498..1217034 Clostridium clariflavum DSM 19732 11561414 YP_005045647.1 CDS Clocl_1046 NC_016627.1 1217171 1218466 D PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase 1217171..1218466 Clostridium clariflavum DSM 19732 11561415 YP_005045648.1 CDS Clocl_1047 NC_016627.1 1218804 1221545 D PFAM: Dockerin type I repeat; manually curated; dockerin-like protein 1218804..1221545 Clostridium clariflavum DSM 19732 11561416 YP_005045649.1 CDS Clocl_1048 NC_016627.1 1221905 1225024 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1221905..1225024 Clostridium clariflavum DSM 19732 11561417 YP_005045650.1 CDS Clocl_1049 NC_016627.1 1226087 1227532 D PFAM: Anticodon binding domain; Prolyl-tRNA synthetase, C-terminal; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family I; prolyl-tRNA synthetase, family I 1226087..1227532 Clostridium clariflavum DSM 19732 11561418 YP_005045651.1 CDS Clocl_1050 NC_016627.1 1227932 1228402 R PFAM: CYTH domain; hypothetical protein complement(1227932..1228402) Clostridium clariflavum DSM 19732 11561419 YP_005045652.1 CDS Clocl_1051 NC_016627.1 1228834 1230534 D PFAM: Dockerin type I repeat; hypothetical protein 1228834..1230534 Clostridium clariflavum DSM 19732 11561420 YP_005045653.1 CDS Clocl_1052 NC_016627.1 1230485 1230700 D hypothetical protein 1230485..1230700 Clostridium clariflavum DSM 19732 11561421 YP_005045654.1 CDS Clocl_1053 NC_016627.1 1230896 1232863 R PFAM: Cellulose binding domain; Cellulose binding domain-containing protein complement(1230896..1232863) Clostridium clariflavum DSM 19732 11561422 YP_005045655.1 CDS Clocl_1054 NC_016627.1 1232844 1233632 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma-I factor complement(1232844..1233632) Clostridium clariflavum DSM 19732 11561423 YP_005045656.1 CDS Clocl_1055 NC_016627.1 1234153 1235604 D PFAM: Glycosyl hydrolases family 8; Dockerin type I repeat; endoglucanase Y 1234153..1235604 Clostridium clariflavum DSM 19732 11561424 YP_005045657.1 CDS Clocl_1056 NC_016627.1 1235930 1238128 D PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein 1235930..1238128 Clostridium clariflavum DSM 19732 11561425 YP_005045658.1 CDS Clocl_1057 NC_016627.1 1238207 1239361 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(1238207..1239361) Clostridium clariflavum DSM 19732 11561426 YP_005045659.1 CDS Clocl_1058 NC_016627.1 1239721 1240380 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; peroxiredoxin 1239721..1240380 Clostridium clariflavum DSM 19732 11561427 YP_005045660.1 CDS Clocl_1059 NC_016627.1 1240467 1241183 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(1240467..1241183) Clostridium clariflavum DSM 19732 11561428 YP_005045661.1 CDS Clocl_1061 NC_016627.1 1243291 1246149 D PFAM: Dockerin type I repeat; CotH protein; dockerin-like protein 1243291..1246149 Clostridium clariflavum DSM 19732 11561430 YP_005045662.1 CDS Clocl_1062 NC_016627.1 1246214 1246999 D PFAM: VTC domain; VTC domain-containing protein 1246214..1246999 Clostridium clariflavum DSM 19732 11561431 YP_005045663.1 CDS Clocl_1063 NC_016627.1 1246951 1247631 D hypothetical protein 1246951..1247631 Clostridium clariflavum DSM 19732 11561432 YP_005045664.1 CDS Clocl_1064 NC_016627.1 1247711 1248208 R PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein complement(1247711..1248208) Clostridium clariflavum DSM 19732 11561433 YP_005045665.1 CDS Clocl_1066 NC_016627.1 1250322 1251158 R PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form; S-adenosylmethionine decarboxylase complement(1250322..1251158) Clostridium clariflavum DSM 19732 11561435 YP_005045666.1 CDS Clocl_1067 NC_016627.1 1251501 1252460 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; lactate dehydrogenase-like oxidoreductase 1251501..1252460 Clostridium clariflavum DSM 19732 11561436 YP_005045667.1 CDS Clocl_1068 NC_016627.1 1253098 1253967 D PFAM: S-adenosylmethionine-dependent methyltransferase; putative SAM-dependent methyltransferase 1253098..1253967 Clostridium clariflavum DSM 19732 11561437 YP_005045668.1 CDS Clocl_1069 NC_016627.1 1253967 1254695 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; 23S RNA-specific pseudouridylate synthase 1253967..1254695 Clostridium clariflavum DSM 19732 11561438 YP_005045669.1 CDS Clocl_1070 NC_016627.1 1254901 1256523 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(1254901..1256523) Clostridium clariflavum DSM 19732 11561439 YP_005045670.1 CDS Clocl_1071 NC_016627.1 1256671 1261902 R PFAM: Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; large extracellular alpha-helical protein complement(1256671..1261902) Clostridium clariflavum DSM 19732 11561440 YP_005045671.1 CDS Clocl_1072 NC_016627.1 1262009 1262530 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02954 family; RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(1262009..1262530) Clostridium clariflavum DSM 19732 11561441 YP_005045672.1 CDS Clocl_1073 NC_016627.1 1262773 1264218 D PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 1262773..1264218 Clostridium clariflavum DSM 19732 11561442 YP_005045673.1 CDS Clocl_1074 NC_016627.1 1264349 1265296 R PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal; putative oxidoreductase, aryl-alcohol dehydrogenase like protein complement(1264349..1265296) Clostridium clariflavum DSM 19732 11561443 YP_005045674.1 CDS Clocl_1075 NC_016627.1 1265515 1266861 D PFAM: Protein of unknown function (DUF815); putative ATPase (AAA+ superfamily) 1265515..1266861 Clostridium clariflavum DSM 19732 11561444 YP_005045675.1 CDS Clocl_1076 NC_016627.1 1267128 1267712 D hypothetical protein 1267128..1267712 Clostridium clariflavum DSM 19732 11561445 YP_005045676.1 CDS Clocl_1077 NC_016627.1 1267975 1269183 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type; isocitrate dehydrogenase 1267975..1269183 Clostridium clariflavum DSM 19732 11561446 YP_005045677.1 CDS Clocl_1078 NC_016627.1 1269324 1270061 D PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; pseudouridylate synthase I 1269324..1270061 Clostridium clariflavum DSM 19732 11561447 YP_005045678.1 CDS Clocl_1079 NC_016627.1 1270189 1270695 D PFAM: SEC-C motif; hypothetical protein 1270189..1270695 Clostridium clariflavum DSM 19732 11561448 YP_005045679.1 CDS Clocl_1080 NC_016627.1 1270710 1270997 D hypothetical protein 1270710..1270997 Clostridium clariflavum DSM 19732 11561449 YP_005045680.1 CDS Clocl_1081 NC_016627.1 1271171 1273060 R PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily complement(1271171..1273060) Clostridium clariflavum DSM 19732 11561450 YP_005045681.1 CDS Clocl_1082 NC_016627.1 1273646 1273981 D hypothetical protein 1273646..1273981 Clostridium clariflavum DSM 19732 11561451 YP_005045682.1 CDS Clocl_1083 NC_016627.1 1274080 1274805 R PFAM: Protein of unknown function DUF45; putative metal-dependent hydrolase complement(1274080..1274805) Clostridium clariflavum DSM 19732 11561452 YP_005045683.1 CDS Clocl_1084 NC_016627.1 1275014 1275352 D hypothetical protein 1275014..1275352 Clostridium clariflavum DSM 19732 11561453 YP_005045684.1 CDS Clocl_1085 NC_016627.1 1275349 1275822 D hypothetical protein 1275349..1275822 Clostridium clariflavum DSM 19732 11561454 YP_005045685.1 CDS Clocl_1086 NC_016627.1 1276173 1277615 D hypothetical protein 1276173..1277615 Clostridium clariflavum DSM 19732 11561455 YP_005045686.1 CDS Clocl_1087 NC_016627.1 1277726 1278421 D PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 1277726..1278421 Clostridium clariflavum DSM 19732 11561456 YP_005045687.1 CDS Clocl_1088 NC_016627.1 1278608 1279621 D PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type; aspartate-ammonia ligase 1278608..1279621 Clostridium clariflavum DSM 19732 11561457 YP_005045688.1 CDS Clocl_1089 NC_016627.1 1279935 1281422 D PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase 1279935..1281422 Clostridium clariflavum DSM 19732 11561458 YP_005045689.1 CDS Clocl_1090 NC_016627.1 1281640 1283394 D PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 1281640..1283394 Clostridium clariflavum DSM 19732 11561459 YP_005045690.1 CDS Clocl_1091 NC_016627.1 1283421 1284176 D PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease III 1283421..1284176 Clostridium clariflavum DSM 19732 11561460 YP_005045691.1 CDS Clocl_1092 NC_016627.1 1284321 1284653 D hypothetical protein 1284321..1284653 Clostridium clariflavum DSM 19732 11561461 YP_005045692.1 CDS Clocl_1093 NC_016627.1 1284825 1285295 D PFAM: PspC domain; manually curated; putative stress-responsive transcriptional regulator 1284825..1285295 Clostridium clariflavum DSM 19732 11561462 YP_005045693.1 CDS Clocl_1094 NC_016627.1 1285292 1286251 D manually curated; hypothetical protein 1285292..1286251 Clostridium clariflavum DSM 19732 11561463 YP_005045694.1 CDS Clocl_1095 NC_016627.1 1286569 1288125 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain S-box 1286569..1288125 Clostridium clariflavum DSM 19732 11561464 YP_005045695.1 CDS Clocl_1096 NC_016627.1 1288118 1288585 R PFAM: Response regulator receiver domain; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain complement(1288118..1288585) Clostridium clariflavum DSM 19732 11561465 YP_005045696.1 CDS Clocl_1097 NC_016627.1 1288675 1290987 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; chemotaxis protein histidine kinase-like protein complement(1288675..1290987) Clostridium clariflavum DSM 19732 11561466 YP_005045697.1 CDS Clocl_1098 NC_016627.1 1291295 1291675 D gas vesicle protein 1291295..1291675 Clostridium clariflavum DSM 19732 11561467 YP_005045698.1 CDS Clocl_1099 NC_016627.1 1291785 1292183 D hypothetical protein 1291785..1292183 Clostridium clariflavum DSM 19732 11561468 YP_005045699.1 CDS Clocl_1100 NC_016627.1 1292220 1292429 R hypothetical protein complement(1292220..1292429) Clostridium clariflavum DSM 19732 11561469 YP_005045700.1 CDS Clocl_1101 NC_016627.1 1292785 1293303 D hypothetical protein 1292785..1293303 Clostridium clariflavum DSM 19732 11561470 YP_005045701.1 CDS Clocl_1102 NC_016627.1 1293323 1293778 R PFAM: CheW-like domain; chemotaxis signal transduction protein complement(1293323..1293778) Clostridium clariflavum DSM 19732 11561471 YP_005045702.1 CDS Clocl_1103 NC_016627.1 1294112 1295317 R PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; glutamate N-acetyltransferase complement(1294112..1295317) Clostridium clariflavum DSM 19732 11561472 YP_005045703.1 CDS Clocl_1104 NC_016627.1 1295961 1298396 D PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent protease La 1295961..1298396 Clostridium clariflavum DSM 19732 11561473 YP_005045704.1 CDS Clocl_1105 NC_016627.1 1298481 1299026 R hypothetical protein complement(1298481..1299026) Clostridium clariflavum DSM 19732 11561474 YP_005045705.1 CDS Clocl_1106 NC_016627.1 1299349 1300608 D hypothetical protein 1299349..1300608 Clostridium clariflavum DSM 19732 11561475 YP_005045706.1 CDS Clocl_1107 NC_016627.1 1300715 1301956 D PFAM: PRC-barrel domain; manually curated; hypothetical protein 1300715..1301956 Clostridium clariflavum DSM 19732 11561476 YP_005045707.1 CDS Clocl_1108 NC_016627.1 1301972 1303309 D PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain; putative vancomycin resistance protein 1301972..1303309 Clostridium clariflavum DSM 19732 11561477 YP_005045708.1 CDS Clocl_1109 NC_016627.1 1303386 1304012 R PFAM: Negative regulator of genetic competence (MecA); negative regulator of genetic competence, sporulation and motility complement(1303386..1304012) Clostridium clariflavum DSM 19732 11561478 YP_005045709.1 CDS Clocl_1110 NC_016627.1 1304390 1305316 D hypothetical protein 1304390..1305316 Clostridium clariflavum DSM 19732 11561479 YP_005045710.1 CDS Clocl_1111 NC_016627.1 1305544 1306128 D PFAM: Maf-like protein; TIGRFAM: MAF protein; MAF protein 1305544..1306128 Clostridium clariflavum DSM 19732 11561480 YP_005045711.1 CDS Clocl_1112 NC_016627.1 1306230 1307252 D PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB 1306230..1307252 Clostridium clariflavum DSM 19732 11561481 YP_005045712.1 CDS Clocl_1113 NC_016627.1 1307270 1308130 D PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; manually curated; rod shape-determining protein MreC 1307270..1308130 Clostridium clariflavum DSM 19732 11561482 YP_005045713.1 CDS Clocl_1114 NC_016627.1 1308127 1308642 D PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; rod shape-determining protein MreD 1308127..1308642 Clostridium clariflavum DSM 19732 11561483 YP_005045714.1 CDS Clocl_1115 NC_016627.1 1308751 1310874 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 1308751..1310874 Clostridium clariflavum DSM 19732 11561484 YP_005045715.1 CDS Clocl_1116 NC_016627.1 1310902 1311582 D PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC; septum site-determining protein MinC 1310902..1311582 Clostridium clariflavum DSM 19732 11561485 YP_005045716.1 CDS Clocl_1117 NC_016627.1 1311858 1312658 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD; septum site-determining protein MinD 1311858..1312658 Clostridium clariflavum DSM 19732 11561486 YP_005045717.1 CDS Clocl_1118 NC_016627.1 1312673 1312957 D PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; cell division topological specificity factor MinE 1312673..1312957 Clostridium clariflavum DSM 19732 11561487 YP_005045718.1 CDS Clocl_1119 NC_016627.1 1313043 1313438 D PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase; methylglyoxal synthase 1313043..1313438 Clostridium clariflavum DSM 19732 11561488 YP_005045719.1 CDS Clocl_1120 NC_016627.1 1313717 1314670 D PFAM: Peptidase family M23; metalloendopeptidase-like membrane protein 1313717..1314670 Clostridium clariflavum DSM 19732 11561489 YP_005045720.1 CDS Clocl_1121 NC_016627.1 1314841 1315650 D PFAM: Peptidase family M50; Zn-dependent protease 1314841..1315650 Clostridium clariflavum DSM 19732 11561490 YP_005045721.1 CDS Clocl_1122 NC_016627.1 1315788 1317401 D PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; endoglucanase 1315788..1317401 Clostridium clariflavum DSM 19732 11561491 YP_005045722.1 CDS Clocl_1123 NC_016627.1 1317485 1317874 D PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme 1317485..1317874 Clostridium clariflavum DSM 19732 11561492 YP_005045723.1 CDS Clocl_1124 NC_016627.1 1318278 1319351 D PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase 1318278..1319351 Clostridium clariflavum DSM 19732 11561493 YP_005045724.1 CDS Clocl_1125 NC_016627.1 1319420 1320076 D PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 1319420..1320076 Clostridium clariflavum DSM 19732 11561494 YP_005045725.1 CDS Clocl_1126 NC_016627.1 1320167 1321369 D PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase 1320167..1321369 Clostridium clariflavum DSM 19732 11561495 YP_005045726.1 CDS Clocl_1127 NC_016627.1 1321415 1321882 D PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1321415..1321882 Clostridium clariflavum DSM 19732 11561496 YP_005045727.1 CDS Clocl_1128 NC_016627.1 1321974 1322597 R PFAM: PilZ domain; PilZ domain-containing protein complement(1321974..1322597) Clostridium clariflavum DSM 19732 11561497 YP_005045728.1 CDS Clocl_1131 NC_016627.1 1323365 1324297 D PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; Hpr(Ser) kinase/phosphatase 1323365..1324297 Clostridium clariflavum DSM 19732 11561500 YP_005045729.1 CDS Clocl_1132 NC_016627.1 1324313 1325038 D PFAM: PHP domain; PHP family phosphohydrolase, histidinol phosphatase 1324313..1325038 Clostridium clariflavum DSM 19732 11561501 YP_005045730.1 CDS Clocl_1133 NC_016627.1 1325115 1326029 D PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylmuramate dehydrogenase 1325115..1326029 Clostridium clariflavum DSM 19732 11561502 YP_005045731.1 CDS Clocl_1134 NC_016627.1 1326082 1326954 D PFAM: P-loop ATPase protein family; putative P-loop-containing kinase 1326082..1326954 Clostridium clariflavum DSM 19732 11561503 YP_005045732.1 CDS Clocl_1135 NC_016627.1 1326954 1328210 D PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related; hypothetical protein 1326954..1328210 Clostridium clariflavum DSM 19732 11561504 YP_005045733.1 CDS Clocl_1136 NC_016627.1 1328310 1330283 D PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative; glycogen debranching enzyme, putative 1328310..1330283 Clostridium clariflavum DSM 19732 11561505 YP_005045734.1 CDS Clocl_1137 NC_016627.1 1330368 1331321 D PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein; hypothetical protein 1330368..1331321 Clostridium clariflavum DSM 19732 11561506 YP_005045735.1 CDS Clocl_1138 NC_016627.1 1331322 1331585 D PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein 1331322..1331585 Clostridium clariflavum DSM 19732 11561507 YP_005045736.1 CDS Clocl_1139 NC_016627.1 1331899 1332234 D PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist; anti-sigma F factor antagonist 1331899..1332234 Clostridium clariflavum DSM 19732 11561508 YP_005045737.1 CDS Clocl_1140 NC_016627.1 1332247 1332684 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor; anti-sigma F factor 1332247..1332684 Clostridium clariflavum DSM 19732 11561509 YP_005045738.1 CDS Clocl_1141 NC_016627.1 1332970 1333716 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; manually curated; RNA polymerase sigma-subunit RpoX/SigF 1332970..1333716 Clostridium clariflavum DSM 19732 11561510 YP_005045739.1 CDS Clocl_1142 NC_016627.1 1334149 1334592 D PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC; stage V sporulation protein AC 1334149..1334592 Clostridium clariflavum DSM 19732 11561511 YP_005045740.1 CDS Clocl_1143 NC_016627.1 1334602 1335621 D PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD; stage V sporulation protein AD 1334602..1335621 Clostridium clariflavum DSM 19732 11561512 YP_005045741.1 CDS Clocl_1144 NC_016627.1 1335773 1336144 D PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE; stage V sporulation protein AE 1335773..1336144 Clostridium clariflavum DSM 19732 11561513 YP_005045742.1 CDS Clocl_1145 NC_016627.1 1336158 1336721 D hypothetical protein 1336158..1336721 Clostridium clariflavum DSM 19732 11561514 YP_005045743.1 CDS Clocl_1147 NC_016627.1 1338626 1339090 D PFAM: CheC-like family; putative inhibitor of MCP methylation, CheC 1338626..1339090 Clostridium clariflavum DSM 19732 11561516 YP_005045744.1 CDS Clocl_1148 NC_016627.1 1339335 1339829 D PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; rRNA methylase, putative, group 2 1339335..1339829 Clostridium clariflavum DSM 19732 11561517 YP_005045745.1 CDS Clocl_1149 NC_016627.1 1339875 1340987 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein; peptidase T-like protein 1339875..1340987 Clostridium clariflavum DSM 19732 11561518 YP_005045746.1 CDS Clocl_1150 NC_016627.1 1341060 1342145 D PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase; 6-phosphofructokinase 1341060..1342145 Clostridium clariflavum DSM 19732 11561519 YP_005045747.1 CDS Clocl_1151 NC_016627.1 1342172 1343071 D PFAM: Uncharacterized conserved protein (DUF2156); hypothetical protein 1342172..1343071 Clostridium clariflavum DSM 19732 11561520 YP_005045748.1 CDS Clocl_1152 NC_016627.1 1343435 1344445 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I 1343435..1344445 Clostridium clariflavum DSM 19732 11561521 YP_005045749.1 CDS Clocl_1153 NC_016627.1 1344526 1345719 D PFAM: Phosphoglycerate kinase; 3-phosphoglycerate kinase 1344526..1345719 Clostridium clariflavum DSM 19732 11561522 YP_005045750.1 CDS Clocl_1154 NC_016627.1 1345739 1346494 D PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 1345739..1346494 Clostridium clariflavum DSM 19732 11561523 YP_005045751.1 CDS Clocl_1155 NC_016627.1 1346674 1348212 D PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1346674..1348212 Clostridium clariflavum DSM 19732 11561524 YP_005045752.1 CDS Clocl_1156 NC_016627.1 1348415 1349347 D hypothetical protein 1348415..1349347 Clostridium clariflavum DSM 19732 11561525 YP_005045753.1 CDS Clocl_1157 NC_016627.1 1349492 1355887 D PFAM: F5/8 type C domain; Dockerin type I repeat; RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; intein N-terminal splicing region; YD repeat (two copies); RHS repeat-associated core domain-containing protein 1349492..1355887 Clostridium clariflavum DSM 19732 11561526 YP_005045754.1 CDS Clocl_1158 NC_016627.1 1355927 1356406 D manually curated; hypothetical protein 1355927..1356406 Clostridium clariflavum DSM 19732 11561527 YP_005045755.1 CDS Clocl_1159 NC_016627.1 1356773 1357279 D hypothetical protein 1356773..1357279 Clostridium clariflavum DSM 19732 11561528 YP_005045756.1 CDS Clocl_1161 NC_016627.1 1357825 1358370 D hypothetical protein 1357825..1358370 Clostridium clariflavum DSM 19732 11561530 YP_005045757.1 CDS Clocl_1163 NC_016627.1 1359868 1360305 D hypothetical protein 1359868..1360305 Clostridium clariflavum DSM 19732 11561532 YP_005045758.1 CDS Clocl_1165 NC_016627.1 1361278 1361532 D PFAM: Domain of unknown function (DUF1871); hypothetical protein 1361278..1361532 Clostridium clariflavum DSM 19732 11561534 YP_005045759.1 CDS Clocl_1166 NC_016627.1 1361789 1361923 D TIGRFAM: YD repeat (two copies); hypothetical protein 1361789..1361923 Clostridium clariflavum DSM 19732 11561535 YP_005045760.1 CDS Clocl_1167 NC_016627.1 1361954 1362274 D hypothetical protein 1361954..1362274 Clostridium clariflavum DSM 19732 11561536 YP_005045761.1 CDS Clocl_1168 NC_016627.1 1362297 1362386 D hypothetical protein 1362297..1362386 Clostridium clariflavum DSM 19732 11561537 YP_005045762.1 CDS Clocl_1169 NC_016627.1 1362425 1362652 D hypothetical protein 1362425..1362652 Clostridium clariflavum DSM 19732 11561538 YP_005045763.1 CDS Clocl_1170 NC_016627.1 1362828 1363217 D hypothetical protein 1362828..1363217 Clostridium clariflavum DSM 19732 11561539 YP_005045764.1 CDS Clocl_1173 NC_016627.1 1364052 1364324 D hypothetical protein 1364052..1364324 Clostridium clariflavum DSM 19732 11561542 YP_005045765.1 CDS Clocl_1174 NC_016627.1 1364324 1364698 D manually curated; hypothetical protein 1364324..1364698 Clostridium clariflavum DSM 19732 11561543 YP_005045766.1 CDS Clocl_1175 NC_016627.1 1364829 1365218 D hypothetical protein 1364829..1365218 Clostridium clariflavum DSM 19732 11561544 YP_005045767.1 CDS Clocl_1178 NC_016627.1 1366761 1367564 D hypothetical protein 1366761..1367564 Clostridium clariflavum DSM 19732 11561547 YP_005045768.1 CDS Clocl_1180 NC_016627.1 1368370 1368810 D hypothetical protein 1368370..1368810 Clostridium clariflavum DSM 19732 11561549 YP_005045769.1 CDS Clocl_1183 NC_016627.1 1369924 1371141 R PFAM: Transposase, Mutator family; transposase complement(1369924..1371141) Clostridium clariflavum DSM 19732 11561552 YP_005045770.1 CDS Clocl_1185 NC_016627.1 1371971 1372192 R hypothetical protein complement(1371971..1372192) Clostridium clariflavum DSM 19732 11561554 YP_005045771.1 CDS Clocl_1186 NC_016627.1 1373096 1374487 R PFAM: Transposase DDE domain; transposase family protein complement(1373096..1374487) Clostridium clariflavum DSM 19732 11561555 YP_005045772.1 CDS Clocl_1187 NC_016627.1 1374610 1375056 R hypothetical protein complement(1374610..1375056) Clostridium clariflavum DSM 19732 11561556 YP_005045773.1 CDS Clocl_1188 NC_016627.1 1375166 1375627 R PFAM: GtrA-like protein; GtrA-like protein complement(1375166..1375627) Clostridium clariflavum DSM 19732 11561557 YP_005045774.1 CDS Clocl_1189 NC_016627.1 1375919 1376161 D hypothetical protein 1375919..1376161 Clostridium clariflavum DSM 19732 11561558 YP_005045775.1 CDS Clocl_1190 NC_016627.1 1376267 1377358 D PFAM: Domain of unknown function (DUF362); hypothetical protein 1376267..1377358 Clostridium clariflavum DSM 19732 11561559 YP_005045776.1 CDS Clocl_1191 NC_016627.1 1377387 1377758 D hypothetical protein 1377387..1377758 Clostridium clariflavum DSM 19732 11561560 YP_005045777.1 CDS Clocl_1192 NC_016627.1 1378027 1378932 D PFAM: Cellulose binding domain; Cellulose binding domain-containing protein 1378027..1378932 Clostridium clariflavum DSM 19732 11561561 YP_005045778.1 CDS Clocl_1193 NC_016627.1 1379041 1380342 D PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; phosphopyruvate hydratase 1379041..1380342 Clostridium clariflavum DSM 19732 11561562 YP_005045779.1 CDS Clocl_1194 NC_016627.1 1380461 1380697 D PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; protein translocase, SecG subunit 1380461..1380697 Clostridium clariflavum DSM 19732 11561563 YP_005045780.1 CDS Clocl_1195 NC_016627.1 1380891 1381346 D PFAM: Transposase IS200 like; transposase 1380891..1381346 Clostridium clariflavum DSM 19732 11561564 YP_005045781.1 CDS Clocl_1196 NC_016627.1 1381807 1382340 D PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein 1381807..1382340 Clostridium clariflavum DSM 19732 11561565 YP_005045782.1 CDS Clocl_1197 NC_016627.1 1382529 1384889 D PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; manually curated; RNAse R 1382529..1384889 Clostridium clariflavum DSM 19732 11561566 YP_005045783.1 CDS Clocl_1198 NC_016627.1 1384957 1385442 D PFAM: Protein of unknown function (DUF523); hypothetical protein 1384957..1385442 Clostridium clariflavum DSM 19732 11561567 YP_005045784.1 CDS Clocl_1199 NC_016627.1 1385527 1385754 R PFAM: PTS HPr component phosphorylation site; HPr-related phosphotransferase system component complement(1385527..1385754) Clostridium clariflavum DSM 19732 11561568 YP_005045785.1 CDS Clocl_1200 NC_016627.1 1386089 1387396 D PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; MiaB-like tRNA modifying enzyme 1386089..1387396 Clostridium clariflavum DSM 19732 11561569 YP_005045786.1 CDS Clocl_1201 NC_016627.1 1387578 1387847 D PFAM: Bacterial protein of unknown function (DUF965); hypothetical protein 1387578..1387847 Clostridium clariflavum DSM 19732 11561570 YP_005045787.1 CDS Clocl_1202 NC_016627.1 1388062 1389009 D PFAM: Aldo/keto reductase family; manually curated; putative oxidoreductase, aryl-alcohol dehydrogenase like protein 1388062..1389009 Clostridium clariflavum DSM 19732 11561571 YP_005045788.1 CDS Clocl_1203 NC_016627.1 1389139 1389564 D PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; RNAse H-fold protein YqgF 1389139..1389564 Clostridium clariflavum DSM 19732 11561572 YP_005045789.1 CDS Clocl_1204 NC_016627.1 1389748 1390032 D PFAM: Protein of unknown function (DUF1292); hypothetical protein 1389748..1390032 Clostridium clariflavum DSM 19732 11561573 YP_005045790.1 CDS Clocl_1205 NC_016627.1 1390313 1391413 D PFAM: Protein of unknown function (DUF3048); hypothetical protein 1390313..1391413 Clostridium clariflavum DSM 19732 11561574 YP_005045791.1 CDS Clocl_1206 NC_016627.1 1391725 1393566 D PFAM: Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; radical SAM family protein 1391725..1393566 Clostridium clariflavum DSM 19732 11561575 YP_005045792.1 CDS Clocl_1207 NC_016627.1 1393559 1394374 D PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein; radical SAM-linked protein 1393559..1394374 Clostridium clariflavum DSM 19732 11561576 YP_005045793.1 CDS Clocl_1208 NC_016627.1 1394384 1395880 D PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; RNAse G 1394384..1395880 Clostridium clariflavum DSM 19732 11561577 YP_005045794.1 CDS Clocl_1209 NC_016627.1 1395977 1396288 D PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21P 1395977..1396288 Clostridium clariflavum DSM 19732 11561578 YP_005045795.1 CDS Clocl_1210 NC_016627.1 1396303 1396632 D PFAM: Protein of unknown function (DUF464); putative ribosomal protein 1396303..1396632 Clostridium clariflavum DSM 19732 11561579 YP_005045796.1 CDS Clocl_1211 NC_016627.1 1396636 1396914 D PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27P 1396636..1396914 Clostridium clariflavum DSM 19732 11561580 YP_005045797.1 CDS Clocl_1212 NC_016627.1 1397175 1398449 D PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain; Obg family GTPase CgtA 1397175..1398449 Clostridium clariflavum DSM 19732 11561581 YP_005045798.1 CDS Clocl_1213 NC_016627.1 1398636 1398824 D hypothetical protein 1398636..1398824 Clostridium clariflavum DSM 19732 11561582 YP_005045799.1 CDS Clocl_1214 NC_016627.1 1398983 1399273 D PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; putative RNA-binding protein, YhbY family 1398983..1399273 Clostridium clariflavum DSM 19732 11561583 YP_005045800.1 CDS Clocl_1215 NC_016627.1 1399348 1399884 R hypothetical protein complement(1399348..1399884) Clostridium clariflavum DSM 19732 11561584 YP_005045801.1 CDS Clocl_1216 NC_016627.1 1400187 1400870 D TIGRFAM: iron-sulfur cluster binding protein, putative; hypothetical protein 1400187..1400870 Clostridium clariflavum DSM 19732 11561585 YP_005045802.1 CDS Clocl_1217 NC_016627.1 1401064 1401537 D PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 1401064..1401537 Clostridium clariflavum DSM 19732 11561586 YP_005045803.1 CDS Clocl_1218 NC_016627.1 1401935 1403821 D PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily 1401935..1403821 Clostridium clariflavum DSM 19732 11561587 YP_005045804.1 CDS Clocl_1219 NC_016627.1 1404350 1405480 D PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase 1404350..1405480 Clostridium clariflavum DSM 19732 11561588 YP_005045805.1 CDS Clocl_1220 NC_016627.1 1405846 1406127 D manually curated; hypothetical protein 1405846..1406127 Clostridium clariflavum DSM 19732 11561589 YP_005045806.1 CDS Clocl_1221 NC_016627.1 1406337 1406516 D hypothetical protein 1406337..1406516 Clostridium clariflavum DSM 19732 11561590 YP_005045807.1 CDS Clocl_1222 NC_016627.1 1406587 1407972 R PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase complement(1406587..1407972) Clostridium clariflavum DSM 19732 11561591 YP_005045808.1 CDS Clocl_1223 NC_016627.1 1407983 1409200 R PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase complement(1407983..1409200) Clostridium clariflavum DSM 19732 11561592 YP_005045809.1 CDS Clocl_1224 NC_016627.1 1409354 1409848 D PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Holliday junction endonuclease RuvC 1409354..1409848 Clostridium clariflavum DSM 19732 11561593 YP_005045810.1 CDS Clocl_1225 NC_016627.1 1410020 1410628 D PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase subunit RuvA 1410020..1410628 Clostridium clariflavum DSM 19732 11561594 YP_005045811.1 CDS Clocl_1226 NC_016627.1 1410766 1411758 D PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase subunit RuvB 1410766..1411758 Clostridium clariflavum DSM 19732 11561595 YP_005045812.1 CDS Clocl_1227 NC_016627.1 1412114 1413214 D PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 1412114..1413214 Clostridium clariflavum DSM 19732 11561596 YP_005045813.1 CDS Clocl_1228 NC_016627.1 1413701 1416592 D PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; N-acetylmuramoyl-L-alanine amidase 1413701..1416592 Clostridium clariflavum DSM 19732 11561597 YP_005045814.1 CDS Clocl_1229 NC_016627.1 1416799 1417788 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose-4-epimerase 1416799..1417788 Clostridium clariflavum DSM 19732 11561598 YP_005045815.1 CDS Clocl_1230 NC_016627.1 1417910 1419067 D PFAM: Sporulation and spore germination; spore germination protein 1417910..1419067 Clostridium clariflavum DSM 19732 11561599 YP_005045816.1 CDS Clocl_1231 NC_016627.1 1419299 1420081 D PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; ribonuclease PH 1419299..1420081 Clostridium clariflavum DSM 19732 11561600 YP_005045817.1 CDS Clocl_1232 NC_016627.1 1420020 1420664 D PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1420020..1420664 Clostridium clariflavum DSM 19732 11561601 YP_005045818.1 CDS Clocl_1235 NC_016627.1 1421701 1421979 D PFAM: Protein of unknown function (DUF1294); hypothetical protein 1421701..1421979 Clostridium clariflavum DSM 19732 11561604 YP_005045819.1 CDS Clocl_1236 NC_016627.1 1422034 1424103 D hypothetical protein 1422034..1424103 Clostridium clariflavum DSM 19732 11561605 YP_005045820.1 CDS Clocl_1237 NC_016627.1 1424169 1426403 D PFAM: UvrD/REP helicase; manually curated; DNA/RNA helicase 1424169..1426403 Clostridium clariflavum DSM 19732 11561606 YP_005045821.1 CDS Clocl_1238 NC_016627.1 1426400 1427224 D hypothetical protein 1426400..1427224 Clostridium clariflavum DSM 19732 11561607 YP_005045822.1 CDS Clocl_1239 NC_016627.1 1427225 1429516 D PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; putative exonuclease, RecJ 1427225..1429516 Clostridium clariflavum DSM 19732 11561608 YP_005045823.1 CDS Clocl_1240 NC_016627.1 1429566 1430384 R PFAM: Protein phosphatase 2C; serine/threonine protein phosphatase complement(1429566..1430384) Clostridium clariflavum DSM 19732 11561609 YP_005045824.1 CDS Clocl_1241 NC_016627.1 1430397 1432397 R PFAM: Protein kinase domain; serine/threonine protein kinase complement(1430397..1432397) Clostridium clariflavum DSM 19732 11561610 YP_005045825.1 CDS Clocl_1242 NC_016627.1 1433086 1434078 D PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type polysaccharide transport system, permease component 1433086..1434078 Clostridium clariflavum DSM 19732 11561611 YP_005045826.1 CDS Clocl_1243 NC_016627.1 1434144 1435070 D PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1434144..1435070 Clostridium clariflavum DSM 19732 11561612 YP_005045827.1 CDS Clocl_1244 NC_016627.1 1435148 1436707 D PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 1435148..1436707 Clostridium clariflavum DSM 19732 11561613 YP_005045828.1 CDS Clocl_1245 NC_016627.1 1437067 1438194 D PFAM: SEC-C motif; hypothetical protein 1437067..1438194 Clostridium clariflavum DSM 19732 11561614 YP_005045829.1 CDS Clocl_1246 NC_016627.1 1438497 1438736 D PFAM: FeoA domain; Fe2+ transport system protein A 1438497..1438736 Clostridium clariflavum DSM 19732 11561615 YP_005045830.1 CDS Clocl_1247 NC_016627.1 1438884 1439927 D PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 1438884..1439927 Clostridium clariflavum DSM 19732 11561616 YP_005045831.1 CDS Clocl_1248 NC_016627.1 1439986 1441536 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(1439986..1441536) Clostridium clariflavum DSM 19732 11561617 YP_005045832.1 CDS Clocl_1249 NC_016627.1 1441920 1443068 D PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box; PAS domain S-box 1441920..1443068 Clostridium clariflavum DSM 19732 11561618 YP_005045833.1 CDS Clocl_1250 NC_016627.1 1443142 1443351 D PFAM: Rubrerythrin; rubrerythrin 1443142..1443351 Clostridium clariflavum DSM 19732 11561619 YP_005045834.1 CDS Clocl_1251 NC_016627.1 1443606 1443914 D hypothetical protein 1443606..1443914 Clostridium clariflavum DSM 19732 11561620 YP_005045835.1 CDS Clocl_1254 NC_016627.1 1446009 1447436 D hypothetical protein 1446009..1447436 Clostridium clariflavum DSM 19732 11561623 YP_005045836.1 CDS Clocl_1255 NC_016627.1 1447472 1448455 D PFAM: Tetratricopeptide repeat; cytochrome c biogenesis factor 1447472..1448455 Clostridium clariflavum DSM 19732 11561624 YP_005045837.1 CDS Clocl_1256 NC_016627.1 1448499 1449665 R PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain; ribulose 1,5-bisphosphate carboxylase, large subunit complement(1448499..1449665) Clostridium clariflavum DSM 19732 11561625 YP_005045838.1 CDS Clocl_1257 NC_016627.1 1449787 1450794 R PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase complement(1449787..1450794) Clostridium clariflavum DSM 19732 11561626 YP_005045839.1 CDS Clocl_1258 NC_016627.1 1450798 1451733 R PFAM: Transketolase, thiamine diphosphate binding domain; transketolase complement(1450798..1451733) Clostridium clariflavum DSM 19732 11561627 YP_005045840.1 CDS Clocl_1259 NC_016627.1 1452688 1455348 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 1452688..1455348 Clostridium clariflavum DSM 19732 11561628 YP_005045841.1 CDS Clocl_1260 NC_016627.1 1455672 1456244 D PFAM: ANTAR domain; response regulator with putative antiterminator output domain 1455672..1456244 Clostridium clariflavum DSM 19732 11561629 YP_005045842.1 CDS Clocl_1261 NC_016627.1 1456741 1457562 D PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; Mo-nitrogenase iron protein subunit NifH 1456741..1457562 Clostridium clariflavum DSM 19732 11561630 YP_005045843.1 CDS Clocl_1262 NC_016627.1 1457584 1457910 D PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII 1457584..1457910 Clostridium clariflavum DSM 19732 11561631 YP_005045844.1 CDS Clocl_1263 NC_016627.1 1457924 1458307 D PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII 1457924..1458307 Clostridium clariflavum DSM 19732 11561632 YP_005045845.1 CDS Clocl_1264 NC_016627.1 1458341 1459930 D PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain; Mo-nitrogenase MoFe protein subunit NifD precursor 1458341..1459930 Clostridium clariflavum DSM 19732 11561633 YP_005045846.1 CDS Clocl_1265 NC_016627.1 1459960 1461321 D PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; Mo-nitrogenase MoFe protein subunit NifK 1459960..1461321 Clostridium clariflavum DSM 19732 11561634 YP_005045847.1 CDS Clocl_1266 NC_016627.1 1461655 1463016 D PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 1461655..1463016 Clostridium clariflavum DSM 19732 11561635 YP_005045848.1 CDS Clocl_1267 NC_016627.1 1463013 1465715 D PFAM: Radical SAM superfamily; Nitrogenase component 1 type Oxidoreductase; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 1463013..1465715 Clostridium clariflavum DSM 19732 11561636 YP_005045849.1 CDS Clocl_1268 NC_016627.1 1465712 1466020 D PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; ferredoxin 1465712..1466020 Clostridium clariflavum DSM 19732 11561637 YP_005045850.1 CDS Clocl_1269 NC_016627.1 1466052 1467125 D PFAM: HMGL-like; isopropylmalate/homocitrate/citramalate synthase 1466052..1467125 Clostridium clariflavum DSM 19732 11561638 YP_005045851.1 CDS Clocl_1270 NC_016627.1 1467141 1467953 D PFAM: HMGL-like; isopropylmalate/homocitrate/citramalate synthase 1467141..1467953 Clostridium clariflavum DSM 19732 11561639 YP_005045852.1 CDS Clocl_1271 NC_016627.1 1468084 1470006 D PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD+ synthetase 1468084..1470006 Clostridium clariflavum DSM 19732 11561640 YP_005045853.1 CDS Clocl_1272 NC_016627.1 1470737 1471954 D PFAM: Transposase, Mutator family; transposase 1470737..1471954 Clostridium clariflavum DSM 19732 11561641 YP_005045854.1 CDS Clocl_1273 NC_016627.1 1472287 1473015 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(1472287..1473015) Clostridium clariflavum DSM 19732 11561642 YP_005045855.1 CDS Clocl_1274 NC_016627.1 1473009 1474538 R PFAM: Integrase core domain; transposase complement(1473009..1474538) Clostridium clariflavum DSM 19732 11561643 YP_005045856.1 CDS Clocl_1275 NC_016627.1 1474638 1475021 D PFAM: Predicted permease; lipoprotein release ABC transporter permease 1474638..1475021 Clostridium clariflavum DSM 19732 11561644 YP_005045857.1 CDS Clocl_1276 NC_016627.1 1475057 1475719 D PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 1475057..1475719 Clostridium clariflavum DSM 19732 11561645 YP_005045858.1 CDS Clocl_1277 NC_016627.1 1476233 1476487 D hypothetical protein 1476233..1476487 Clostridium clariflavum DSM 19732 11561646 YP_005045859.1 CDS Clocl_1278 NC_016627.1 1476628 1476804 D hypothetical protein 1476628..1476804 Clostridium clariflavum DSM 19732 11561647 YP_005045860.1 CDS Clocl_1279 NC_016627.1 1477232 1477645 D PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; hemerythrin-like metal-binding domain-containing protein 1477232..1477645 Clostridium clariflavum DSM 19732 11561648 YP_005045861.1 CDS Clocl_1280 NC_016627.1 1477747 1479084 R PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains complement(1477747..1479084) Clostridium clariflavum DSM 19732 11561649 YP_005045862.1 CDS Clocl_1281 NC_016627.1 1479085 1480650 R PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; nitrogenase molybdenum-iron protein, alpha and beta chains complement(1479085..1480650) Clostridium clariflavum DSM 19732 11561650 YP_005045863.1 CDS Clocl_1282 NC_016627.1 1480725 1481768 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(1480725..1481768) Clostridium clariflavum DSM 19732 11561651 YP_005045864.1 CDS Clocl_1283 NC_016627.1 1481859 1482632 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(1481859..1482632) Clostridium clariflavum DSM 19732 11561652 YP_005045865.1 CDS Clocl_1284 NC_016627.1 1483080 1483931 D hypothetical protein 1483080..1483931 Clostridium clariflavum DSM 19732 11561653 YP_005045866.1 CDS Clocl_1285 NC_016627.1 1483944 1484978 D glutathione synthase/ribosomal protein S6 modification protein 1483944..1484978 Clostridium clariflavum DSM 19732 11561654 YP_005045867.1 CDS Clocl_1286 NC_016627.1 1484926 1485786 D PFAM: Sulfatase; putative membrane-associated, metal-dependent hydrolase 1484926..1485786 Clostridium clariflavum DSM 19732 11561655 YP_005045868.1 CDS Clocl_1287 NC_016627.1 1485799 1487085 D PFAM: Radical SAM superfamily; HemN C-terminal region; Fe-S oxidoreductase, coproporphyrinogen III oxidase 1485799..1487085 Clostridium clariflavum DSM 19732 11561656 YP_005045869.1 CDS Clocl_1288 NC_016627.1 1487078 1488580 D PFAM: haloacid dehalogenase-like hydrolase; putative HAD superfamily hydrolase 1487078..1488580 Clostridium clariflavum DSM 19732 11561657 YP_005045870.1 CDS Clocl_1290 NC_016627.1 1489830 1491119 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(1489830..1491119) Clostridium clariflavum DSM 19732 11561659 YP_005045871.1 CDS Clocl_1291 NC_016627.1 1491811 1492536 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family complement(1491811..1492536) Clostridium clariflavum DSM 19732 11561660 YP_005045872.1 CDS Clocl_1293 NC_016627.1 1500575 1502029 D PFAM: S-layer homology domain; Subtilase family; subtilisin-like serine protease 1500575..1502029 Clostridium clariflavum DSM 19732 11561662 YP_005045873.1 CDS Clocl_1294 NC_016627.1 1502155 1502460 R hypothetical protein complement(1502155..1502460) Clostridium clariflavum DSM 19732 11561663 YP_005045874.1 CDS Clocl_1298 NC_016627.1 1503153 1504136 R PFAM: Dockerin type I repeat; endoglucanase-like protein complement(1503153..1504136) Clostridium clariflavum DSM 19732 11561667 YP_005045875.1 CDS Clocl_1299 NC_016627.1 1504843 1505667 D PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 1504843..1505667 Clostridium clariflavum DSM 19732 11561668 YP_005045876.1 CDS Clocl_1300 NC_016627.1 1505693 1506535 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter permease 1505693..1506535 Clostridium clariflavum DSM 19732 11561669 YP_005045877.1 CDS Clocl_1301 NC_016627.1 1506381 1507448 D PFAM: ABC transporter; manually curated; ABC-type sulfate/molybdate transport systems, ATPase component 1506381..1507448 Clostridium clariflavum DSM 19732 11561670 YP_005045878.1 CDS Clocl_1302 NC_016627.1 1507573 1509180 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 (bRF-3) complement(1507573..1509180) Clostridium clariflavum DSM 19732 11561671 YP_005045879.1 CDS Clocl_1303 NC_016627.1 1509498 1511171 D PFAM: Phosphoribulokinase / Uridine kinase family; uridine kinase 1509498..1511171 Clostridium clariflavum DSM 19732 11561672 YP_005045880.1 CDS Clocl_1304 NC_016627.1 1511282 1511635 D PFAM: DRTGG domain; DRTGG domain-containing protein 1511282..1511635 Clostridium clariflavum DSM 19732 11561673 YP_005045881.1 CDS Clocl_1305 NC_016627.1 1511632 1512057 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor 1511632..1512057 Clostridium clariflavum DSM 19732 11561674 YP_005045882.1 CDS Clocl_1306 NC_016627.1 1512139 1513473 D PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; 4Fe-4S binding domain; iron only hydrogenase large subunit 1512139..1513473 Clostridium clariflavum DSM 19732 11561675 YP_005045883.1 CDS Clocl_1307 NC_016627.1 1513484 1513813 D PFAM: DRTGG domain; DRTGG domain-containing protein 1513484..1513813 Clostridium clariflavum DSM 19732 11561676 YP_005045884.1 CDS Clocl_1308 NC_016627.1 1513897 1514610 D PFAM: PHP domain; PHP domain-containing protein 1513897..1514610 Clostridium clariflavum DSM 19732 11561677 YP_005045885.1 CDS Clocl_1309 NC_016627.1 1514975 1515472 D PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH:ubiquinone oxidoreductase 24 kD subunit 1514975..1515472 Clostridium clariflavum DSM 19732 11561678 YP_005045886.1 CDS Clocl_1310 NC_016627.1 1515484 1516050 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 1515484..1516050 Clostridium clariflavum DSM 19732 11561679 YP_005045887.1 CDS Clocl_1311 NC_016627.1 1516034 1516402 D ferredoxin 1516034..1516402 Clostridium clariflavum DSM 19732 11561680 YP_005045888.1 CDS Clocl_1312 NC_016627.1 1516511 1518304 D PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 1516511..1518304 Clostridium clariflavum DSM 19732 11561681 YP_005045889.1 CDS Clocl_1313 NC_016627.1 1518304 1520079 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only; hydrogenase, Fe-only 1518304..1520079 Clostridium clariflavum DSM 19732 11561682 YP_005045890.1 CDS Clocl_1314 NC_016627.1 1520217 1520609 D PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; ADP-ribose pyrophosphatase 1520217..1520609 Clostridium clariflavum DSM 19732 11561683 YP_005045891.1 CDS Clocl_1315 NC_016627.1 1520620 1521153 D PFAM: Nitroreductase family; nitroreductase 1520620..1521153 Clostridium clariflavum DSM 19732 11561684 YP_005045892.1 CDS Clocl_1316 NC_016627.1 1521210 1521803 D PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family; hypothetical protein 1521210..1521803 Clostridium clariflavum DSM 19732 11561685 YP_005045893.1 CDS Clocl_1317 NC_016627.1 1521824 1522717 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 1521824..1522717 Clostridium clariflavum DSM 19732 11561686 YP_005045894.1 CDS Clocl_1318 NC_016627.1 1522823 1523983 D PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; aspartate/tyrosine/aromatic aminotransferase 1522823..1523983 Clostridium clariflavum DSM 19732 11561687 YP_005045895.1 CDS Clocl_1319 NC_016627.1 1524533 1525552 D PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1524533..1525552 Clostridium clariflavum DSM 19732 11561688 YP_005045896.1 CDS Clocl_1320 NC_016627.1 1525698 1528088 D PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 1525698..1528088 Clostridium clariflavum DSM 19732 11561689 YP_005045897.1 CDS Clocl_1321 NC_016627.1 1528186 1528407 R PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type complement(1528186..1528407) Clostridium clariflavum DSM 19732 11561690 YP_005045898.1 CDS Clocl_1322 NC_016627.1 1528869 1530221 D PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 1528869..1530221 Clostridium clariflavum DSM 19732 11561691 YP_005045899.1 CDS Clocl_1323 NC_016627.1 1530288 1531094 R PFAM: Calcineurin-like phosphoesterase; manually curated; putative phosphohydrolase complement(1530288..1531094) Clostridium clariflavum DSM 19732 11561692 YP_005045900.1 CDS Clocl_1324 NC_016627.1 1531504 1532757 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 1531504..1532757 Clostridium clariflavum DSM 19732 11561693 YP_005045901.1 CDS Clocl_1326 NC_016627.1 1533396 1534100 D hypothetical protein 1533396..1534100 Clostridium clariflavum DSM 19732 11561695 YP_005045902.1 CDS Clocl_1327 NC_016627.1 1534380 1535387 D PFAM: Domain of unknown function (DUF377); putative glycosylase 1534380..1535387 Clostridium clariflavum DSM 19732 11561696 YP_005045903.1 CDS Clocl_1328 NC_016627.1 1535447 1536490 D PFAM: Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 1535447..1536490 Clostridium clariflavum DSM 19732 11561697 YP_005045904.1 CDS Clocl_1329 NC_016627.1 1536514 1537689 D PFAM: Glycosyl transferases group 1; glycosyltransferase 1536514..1537689 Clostridium clariflavum DSM 19732 11561698 YP_005045905.1 CDS Clocl_1330 NC_016627.1 1537689 1538720 D hypothetical protein 1537689..1538720 Clostridium clariflavum DSM 19732 11561699 YP_005045906.1 CDS Clocl_1331 NC_016627.1 1539573 1540661 D PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; phosphomannose isomerase 1539573..1540661 Clostridium clariflavum DSM 19732 11561700 YP_005045907.1 CDS Clocl_1332 NC_016627.1 1540712 1541263 D PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25P 1540712..1541263 Clostridium clariflavum DSM 19732 11561701 YP_005045908.1 CDS Clocl_1333 NC_016627.1 1541607 1542401 D PFAM: short chain dehydrogenase; short-chain alcohol dehydrogenase 1541607..1542401 Clostridium clariflavum DSM 19732 11561702 YP_005045909.1 CDS Clocl_1334 NC_016627.1 1543463 1544428 D PFAM: HTH domain; putative transcriptional regulator 1543463..1544428 Clostridium clariflavum DSM 19732 11561703 YP_005045910.1 CDS Clocl_1335 NC_016627.1 1544626 1545915 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(1544626..1545915) Clostridium clariflavum DSM 19732 11561704 YP_005045911.1 CDS Clocl_1336 NC_016627.1 1546330 1546845 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 1546330..1546845 Clostridium clariflavum DSM 19732 11561705 YP_005045912.1 CDS Clocl_1337 NC_016627.1 1546845 1548128 D hypothetical protein 1546845..1548128 Clostridium clariflavum DSM 19732 11561706 YP_005045913.1 CDS Clocl_1338 NC_016627.1 1548424 1549263 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 1548424..1549263 Clostridium clariflavum DSM 19732 11561707 YP_005045914.1 CDS Clocl_1339 NC_016627.1 1549397 1549984 D PFAM: NADPH-dependent FMN reductase; manually curated; multimeric flavodoxin WrbA 1549397..1549984 Clostridium clariflavum DSM 19732 11561708 YP_005045915.1 CDS Clocl_1340 NC_016627.1 1550329 1550997 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 1550329..1550997 Clostridium clariflavum DSM 19732 11561709 YP_005045916.1 CDS Clocl_1341 NC_016627.1 1551012 1551737 D PFAM: PilZ domain; PilZ domain-containing protein 1551012..1551737 Clostridium clariflavum DSM 19732 11561710 YP_005045917.1 CDS Clocl_1342 NC_016627.1 1551773 1551979 D hypothetical protein 1551773..1551979 Clostridium clariflavum DSM 19732 11561711 YP_005045918.1 CDS Clocl_1343 NC_016627.1 1552023 1553081 D PFAM: domain; 2-oxoacid:ferredoxin oxidoreductase subunit alpha 1552023..1553081 Clostridium clariflavum DSM 19732 11561712 YP_005045919.1 CDS Clocl_1344 NC_016627.1 1553099 1553845 D PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 2-oxoacid:ferredoxin oxidoreductase subunit beta 1553099..1553845 Clostridium clariflavum DSM 19732 11561713 YP_005045920.1 CDS Clocl_1345 NC_016627.1 1553853 1554386 D PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:ferredoxin oxidoreductase subunit gamma 1553853..1554386 Clostridium clariflavum DSM 19732 11561714 YP_005045921.1 CDS Clocl_1346 NC_016627.1 1554505 1556619 R PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; glutamine synthetase complement(1554505..1556619) Clostridium clariflavum DSM 19732 11561715 YP_005045922.1 CDS Clocl_1347 NC_016627.1 1557058 1557378 R hypothetical protein complement(1557058..1557378) Clostridium clariflavum DSM 19732 11561716 YP_005045923.1 CDS Clocl_1348 NC_016627.1 1557530 1558633 R PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; cell envelope-related function transcriptional attenuator common domain-containing protein complement(1557530..1558633) Clostridium clariflavum DSM 19732 11561717 YP_005045924.1 CDS Clocl_1349 NC_016627.1 1558886 1559629 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family complement(1558886..1559629) Clostridium clariflavum DSM 19732 11561718 YP_005045925.1 CDS Clocl_1350 NC_016627.1 1559632 1560165 R hypothetical protein complement(1559632..1560165) Clostridium clariflavum DSM 19732 11561719 YP_005045926.1 CDS Clocl_1351 NC_016627.1 1560179 1561174 R PFAM: SigmaW regulon antibacterial; hypothetical protein complement(1560179..1561174) Clostridium clariflavum DSM 19732 11561720 YP_005045927.1 CDS Clocl_1352 NC_016627.1 1561223 1561726 R PFAM: NfeD-like; membrane-bound serine protease complement(1561223..1561726) Clostridium clariflavum DSM 19732 11561721 YP_005045928.1 CDS Clocl_1353 NC_016627.1 1561921 1562790 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(1561921..1562790) Clostridium clariflavum DSM 19732 11561722 YP_005045929.1 CDS Clocl_1354 NC_016627.1 1563006 1564073 R PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; branched-chain amino acid aminotransferase, group II complement(1563006..1564073) Clostridium clariflavum DSM 19732 11561723 YP_005045930.1 CDS Clocl_1355 NC_016627.1 1564398 1564916 D PFAM: Protein of unknown function; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD phosphatase subfamily IIIA 1564398..1564916 Clostridium clariflavum DSM 19732 11561724 YP_005045931.1 CDS Clocl_1356 NC_016627.1 1564972 1565853 D PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate dehydrogenase 1564972..1565853 Clostridium clariflavum DSM 19732 11561725 YP_005045932.1 CDS Clocl_1357 NC_016627.1 1566153 1566530 D hypothetical protein 1566153..1566530 Clostridium clariflavum DSM 19732 11561726 YP_005045933.1 CDS Clocl_1358 NC_016627.1 1566636 1567442 D PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; prepilin signal peptidase PulO-like peptidase 1566636..1567442 Clostridium clariflavum DSM 19732 11561727 YP_005045934.1 CDS Clocl_1359 NC_016627.1 1567541 1567813 D PFAM: Late competence development protein ComFB; Late competence development protein ComFB 1567541..1567813 Clostridium clariflavum DSM 19732 11561728 YP_005045935.1 CDS Clocl_1360 NC_016627.1 1567980 1568843 D PFAM: Xylose isomerase-like TIM barrel; endonuclease IV 1567980..1568843 Clostridium clariflavum DSM 19732 11561729 YP_005045936.1 CDS Clocl_1361 NC_016627.1 1568840 1569268 D PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 1568840..1569268 Clostridium clariflavum DSM 19732 11561730 YP_005045937.1 CDS Clocl_1362 NC_016627.1 1569330 1570415 D PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro aminopeptidase 1569330..1570415 Clostridium clariflavum DSM 19732 11561731 YP_005045938.1 CDS Clocl_1363 NC_016627.1 1570794 1571351 D PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P (EF-P) 1570794..1571351 Clostridium clariflavum DSM 19732 11561732 YP_005045939.1 CDS Clocl_1364 NC_016627.1 1571581 1572003 D hypothetical protein 1571581..1572003 Clostridium clariflavum DSM 19732 11561733 YP_005045940.1 CDS Clocl_1365 NC_016627.1 1572122 1572868 R TIGRFAM: probable DNA metabolism protein; putative DNA metabolism protein complement(1572122..1572868) Clostridium clariflavum DSM 19732 11561734 YP_005045941.1 CDS Clocl_1366 NC_016627.1 1574197 1574433 D hypothetical protein 1574197..1574433 Clostridium clariflavum DSM 19732 11561735 YP_005045942.1 CDS Clocl_1367 NC_016627.1 1574503 1576353 D PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 1574503..1576353 Clostridium clariflavum DSM 19732 11561736 YP_005045943.1 CDS Clocl_1368 NC_016627.1 1576587 1576856 D PFAM: ACT domain; ACT domain-containing protein 1576587..1576856 Clostridium clariflavum DSM 19732 11561737 YP_005045944.1 CDS Clocl_1369 NC_016627.1 1576868 1578226 D PFAM: Uncharacterized ACR (DUF711); hypothetical protein 1576868..1578226 Clostridium clariflavum DSM 19732 11561738 YP_005045945.1 CDS Clocl_1370 NC_016627.1 1578428 1578976 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 1578428..1578976 Clostridium clariflavum DSM 19732 11561739 YP_005045946.1 CDS Clocl_1371 NC_016627.1 1578969 1581968 D PFAM: Beta propeller domain; manually curated; secreted protein with C-terminal beta-propeller domain 1578969..1581968 Clostridium clariflavum DSM 19732 11561740 YP_005045947.1 CDS Clocl_1372 NC_016627.1 1582213 1583034 D PFAM: Protein of unknown function (DUF990); ABC transporter permease 1582213..1583034 Clostridium clariflavum DSM 19732 11561741 YP_005045948.1 CDS Clocl_1373 NC_016627.1 1583031 1583813 D PFAM: Protein of unknown function (DUF990); ABC transporter permease 1583031..1583813 Clostridium clariflavum DSM 19732 11561742 YP_005045949.1 CDS Clocl_1374 NC_016627.1 1583816 1584787 D PFAM: ABC transporter; ABC transporter ATPase 1583816..1584787 Clostridium clariflavum DSM 19732 11561743 YP_005045950.1 CDS Clocl_1375 NC_016627.1 1585409 1585834 D hypothetical protein 1585409..1585834 Clostridium clariflavum DSM 19732 11561744 YP_005045951.1 CDS Clocl_1376 NC_016627.1 1585804 1586097 D hypothetical protein 1585804..1586097 Clostridium clariflavum DSM 19732 11561745 YP_005045952.1 CDS Clocl_1377 NC_016627.1 1586094 1586822 D hypothetical protein 1586094..1586822 Clostridium clariflavum DSM 19732 11561746 YP_005045953.1 CDS Clocl_1378 NC_016627.1 1587306 1588526 D PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM additional 4Fe4S-binding domain protein 1587306..1588526 Clostridium clariflavum DSM 19732 11561747 YP_005045954.1 CDS Clocl_1379 NC_016627.1 1588527 1589675 D hypothetical protein 1588527..1589675 Clostridium clariflavum DSM 19732 11561748 YP_005045955.1 CDS Clocl_1380 NC_016627.1 1589787 1590650 D PFAM: Peptidase family M23; membrane-bound metallopeptidase 1589787..1590650 Clostridium clariflavum DSM 19732 11561749 YP_005045956.1 CDS Clocl_1381 NC_016627.1 1590839 1591435 R PFAM: Manganese containing catalase; Mn-containing catalase complement(1590839..1591435) Clostridium clariflavum DSM 19732 11561750 YP_005045957.1 CDS Clocl_1382 NC_016627.1 1591466 1591714 R hypothetical protein complement(1591466..1591714) Clostridium clariflavum DSM 19732 11561751 YP_005045958.1 CDS Clocl_1383 NC_016627.1 1591726 1591941 R hypothetical protein complement(1591726..1591941) Clostridium clariflavum DSM 19732 11561752 YP_005045959.1 CDS Clocl_1384 NC_016627.1 1592143 1592985 D PFAM: Carbon-nitrogen hydrolase; putative amidohydrolase 1592143..1592985 Clostridium clariflavum DSM 19732 11561753 YP_005045960.1 CDS Clocl_1385 NC_016627.1 1593215 1593478 D PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 1593215..1593478 Clostridium clariflavum DSM 19732 11561754 YP_005045961.1 CDS Clocl_1386 NC_016627.1 1593811 1595940 D PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 1593811..1595940 Clostridium clariflavum DSM 19732 11561755 YP_005045962.1 CDS Clocl_1387 NC_016627.1 1595973 1597226 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); putative Zn-dependent peptidase 1595973..1597226 Clostridium clariflavum DSM 19732 11561756 YP_005045963.1 CDS Clocl_1388 NC_016627.1 1597557 1598429 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit; glutamyl-tRNA reductase 1597557..1598429 Clostridium clariflavum DSM 19732 11561757 YP_005045964.1 CDS Clocl_1389 NC_016627.1 1598433 1599017 D PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit; dipicolinic acid synthetase subunit B 1598433..1599017 Clostridium clariflavum DSM 19732 11561758 YP_005045965.1 CDS Clocl_1390 NC_016627.1 1599607 1601979 D PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 1599607..1601979 Clostridium clariflavum DSM 19732 11561759 YP_005045966.1 CDS Clocl_1391 NC_016627.1 1601997 1603052 D PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; pilus retraction protein PilT 1601997..1603052 Clostridium clariflavum DSM 19732 11561760 YP_005045967.1 CDS Clocl_1392 NC_016627.1 1603415 1604629 D PFAM: Bacterial type II secretion system protein F domain; type II secretory pathway, component PulF 1603415..1604629 Clostridium clariflavum DSM 19732 11561761 YP_005045968.1 CDS Clocl_1393 NC_016627.1 1604770 1605288 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1604770..1605288 Clostridium clariflavum DSM 19732 11561762 YP_005045969.1 CDS Clocl_1394 NC_016627.1 1605351 1605965 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1605351..1605965 Clostridium clariflavum DSM 19732 11561763 YP_005045970.1 CDS Clocl_1395 NC_016627.1 1605989 1606546 D PFAM: Fimbrial assembly protein (PilN); Tfp pilus assembly protein PilN 1605989..1606546 Clostridium clariflavum DSM 19732 11561764 YP_005045971.1 CDS Clocl_1396 NC_016627.1 1606550 1607716 D hypothetical protein 1606550..1607716 Clostridium clariflavum DSM 19732 11561765 YP_005045972.1 CDS Clocl_1397 NC_016627.1 1607726 1608331 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1607726..1608331 Clostridium clariflavum DSM 19732 11561766 YP_005045973.1 CDS Clocl_1398 NC_016627.1 1608406 1610997 D hypothetical protein 1608406..1610997 Clostridium clariflavum DSM 19732 11561767 YP_005045974.1 CDS Clocl_1399 NC_016627.1 1611014 1612288 D manually curated; hypothetical protein 1611014..1612288 Clostridium clariflavum DSM 19732 11561768 YP_005045975.1 CDS Clocl_1400 NC_016627.1 1612425 1613165 D PFAM: Clp protease; protease subunit of ATP-dependent protease 1612425..1613165 Clostridium clariflavum DSM 19732 11561769 YP_005045976.1 CDS Clocl_1401 NC_016627.1 1613206 1613424 D hypothetical protein 1613206..1613424 Clostridium clariflavum DSM 19732 11561770 YP_005045977.1 CDS Clocl_1402 NC_016627.1 1613731 1616094 D PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; manually curated; DNA segregation ATPase FtsK 1613731..1616094 Clostridium clariflavum DSM 19732 11561771 YP_005045978.1 CDS Clocl_1403 NC_016627.1 1616170 1618155 D PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; manually curated; radical SAM protein YgiQ 1616170..1618155 Clostridium clariflavum DSM 19732 11561772 YP_005045979.1 CDS Clocl_1404 NC_016627.1 1618380 1619240 D PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; manually curated; 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase 1618380..1619240 Clostridium clariflavum DSM 19732 11561773 YP_005045980.1 CDS Clocl_1405 NC_016627.1 1619243 1619923 D hypothetical protein 1619243..1619923 Clostridium clariflavum DSM 19732 11561774 YP_005045981.1 CDS Clocl_1406 NC_016627.1 1620074 1621660 D PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; hypothetical protein 1620074..1621660 Clostridium clariflavum DSM 19732 11561775 YP_005045982.1 CDS Clocl_1407 NC_016627.1 1621761 1622543 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; metallophosphoesterase, MG_246/BB_0505 family 1621761..1622543 Clostridium clariflavum DSM 19732 11561776 YP_005045983.1 CDS Clocl_1408 NC_016627.1 1622610 1622879 D PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 1622610..1622879 Clostridium clariflavum DSM 19732 11561777 YP_005045984.1 CDS Clocl_1409 NC_016627.1 1623017 1623826 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1623017..1623826 Clostridium clariflavum DSM 19732 11561778 YP_005045985.1 CDS Clocl_1410 NC_016627.1 1623870 1626125 D PFAM: von Willebrand factor type A domain; von Willebrand factor type A-like protein 1623870..1626125 Clostridium clariflavum DSM 19732 11561779 YP_005045986.1 CDS Clocl_1411 NC_016627.1 1626379 1626732 D PFAM: Transposase; Transposase 1626379..1626732 Clostridium clariflavum DSM 19732 11561780 YP_005045987.1 CDS Clocl_1412 NC_016627.1 1626729 1627082 D PFAM: IS66 Orf2 like protein; transposase 1626729..1627082 Clostridium clariflavum DSM 19732 11561781 YP_005045988.1 CDS Clocl_1413 NC_016627.1 1627146 1628750 D PFAM: Transposase IS66 family; transposase 1627146..1628750 Clostridium clariflavum DSM 19732 11561782 YP_005045989.1 CDS Clocl_1414 NC_016627.1 1628747 1628848 D hypothetical protein 1628747..1628848 Clostridium clariflavum DSM 19732 11561783 YP_005045990.1 CDS Clocl_1415 NC_016627.1 1628871 1629032 D hypothetical protein 1628871..1629032 Clostridium clariflavum DSM 19732 11561784 YP_005045991.1 CDS Clocl_1416 NC_016627.1 1629221 1630306 R PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms); aspartate-semialdehyde dehydrogenase complement(1629221..1630306) Clostridium clariflavum DSM 19732 11561785 YP_005045992.1 CDS Clocl_1417 NC_016627.1 1631132 1632541 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 1631132..1632541 Clostridium clariflavum DSM 19732 11561786 YP_005045993.1 CDS Clocl_1418 NC_016627.1 1632811 1633584 D hypothetical protein 1632811..1633584 Clostridium clariflavum DSM 19732 11561787 YP_005045994.1 CDS Clocl_1419 NC_016627.1 1633721 1633984 D PFAM: Protein of unknown function (DUF3343); hypothetical protein 1633721..1633984 Clostridium clariflavum DSM 19732 11561788 YP_005045995.1 CDS Clocl_1420 NC_016627.1 1634215 1635192 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-D-glucose 4,6-dehydratase complement(1634215..1635192) Clostridium clariflavum DSM 19732 11561789 YP_005045996.1 CDS Clocl_1421 NC_016627.1 1635557 1636258 D PFAM: Bacterial protein of unknown function (DUF881); hypothetical protein 1635557..1636258 Clostridium clariflavum DSM 19732 11561790 YP_005045997.1 CDS Clocl_1422 NC_016627.1 1636343 1636831 R manually curated; hypothetical protein complement(1636343..1636831) Clostridium clariflavum DSM 19732 11561791 YP_005045998.1 CDS Clocl_1423 NC_016627.1 1637095 1637421 R PFAM: Carbohydrate binding domain (family 25); Carbohydrate binding domain (family 25) complement(1637095..1637421) Clostridium clariflavum DSM 19732 11561792 YP_005045999.1 CDS Clocl_1424 NC_016627.1 1637875 1640334 D PFAM: Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 1637875..1640334 Clostridium clariflavum DSM 19732 11561793 YP_005046000.1 CDS Clocl_1425 NC_016627.1 1640416 1641021 R hypothetical protein complement(1640416..1641021) Clostridium clariflavum DSM 19732 11561794 YP_005046001.1 CDS Clocl_1426 NC_016627.1 1641375 1642091 D PFAM: Bacterial protein of unknown function (DUF881); hypothetical protein 1641375..1642091 Clostridium clariflavum DSM 19732 11561795 YP_005046002.1 CDS Clocl_1427 NC_016627.1 1642088 1642792 D PFAM: Bacterial protein of unknown function (DUF881); hypothetical protein 1642088..1642792 Clostridium clariflavum DSM 19732 11561796 YP_005046003.1 CDS Clocl_1428 NC_016627.1 1643048 1643971 D PFAM: Polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; putative xylanase/chitin deacetylase 1643048..1643971 Clostridium clariflavum DSM 19732 11561797 YP_005046004.1 CDS Clocl_1429 NC_016627.1 1644022 1644339 D PFAM: YabP family; TIGRFAM: sporulation protein YqfC; sporulation protein YqfC 1644022..1644339 Clostridium clariflavum DSM 19732 11561798 YP_005046005.1 CDS Clocl_1430 NC_016627.1 1644707 1645900 D PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; manually curated; sporulation protein YqfD 1644707..1645900 Clostridium clariflavum DSM 19732 11561799 YP_005046006.1 CDS Clocl_1431 NC_016627.1 1645901 1646872 D PFAM: PhoH-like protein; phosphate starvation-inducible protein PhoH 1645901..1646872 Clostridium clariflavum DSM 19732 11561800 YP_005046007.1 CDS Clocl_1432 NC_016627.1 1646922 1649243 D PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; manually curated; putative domain HDIG-containing protein 1646922..1649243 Clostridium clariflavum DSM 19732 11561801 YP_005046008.1 CDS Clocl_1433 NC_016627.1 1649240 1649725 D PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metalloprotein, YbeY/UPF0054 family 1649240..1649725 Clostridium clariflavum DSM 19732 11561802 YP_005046009.1 CDS Clocl_1434 NC_016627.1 1649811 1650704 D PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 1649811..1650704 Clostridium clariflavum DSM 19732 11561803 YP_005046010.1 CDS Clocl_1435 NC_016627.1 1650987 1651130 D hypothetical protein 1650987..1651130 Clostridium clariflavum DSM 19732 11561804 YP_005046011.1 CDS Clocl_1436 NC_016627.1 1651229 1651972 D PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA replication and repair protein RecO 1651229..1651972 Clostridium clariflavum DSM 19732 11561805 YP_005046012.1 CDS Clocl_1438 NC_016627.1 1652887 1653558 D PFAM: PilZ domain; PilZ domain-containing protein 1652887..1653558 Clostridium clariflavum DSM 19732 11561806 YP_005046013.1 CDS Clocl_1439 NC_016627.1 1653804 1654967 D PFAM: Aminotransferase class-V; cysteine desulfurase 1653804..1654967 Clostridium clariflavum DSM 19732 11561807 YP_005046014.1 CDS Clocl_1440 NC_016627.1 1654964 1656142 D PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; thiazole biosynthesis/tRNA modification protein ThiI 1654964..1656142 Clostridium clariflavum DSM 19732 11561808 YP_005046015.1 CDS Clocl_1441 NC_016627.1 1656314 1657684 D PFAM: Putative peptidoglycan binding domain; G5 domain; VanW like protein; putative vancomycin resistance protein 1656314..1657684 Clostridium clariflavum DSM 19732 11561809 YP_005046016.1 CDS Clocl_1442 NC_016627.1 1657761 1658447 D PFAM: Uncharacterized protein conserved in bacteria (DUF2225); hypothetical protein 1657761..1658447 Clostridium clariflavum DSM 19732 11561810 YP_005046017.1 CDS Clocl_1443 NC_016627.1 1658576 1659559 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; hydrogenase maturation factor 1658576..1659559 Clostridium clariflavum DSM 19732 11561811 YP_005046018.1 CDS Clocl_1444 NC_016627.1 1659620 1661032 D PFAM: O-Antigen ligase; Lipid A core--O-antigen ligase-like protein 1659620..1661032 Clostridium clariflavum DSM 19732 11561812 YP_005046019.1 CDS Clocl_1445 NC_016627.1 1661194 1662432 D PFAM: Serine hydroxymethyltransferase; glycine/serine hydroxymethyltransferase 1661194..1662432 Clostridium clariflavum DSM 19732 11561813 YP_005046020.1 CDS Clocl_1446 NC_016627.1 1662600 1665236 R PFAM: Transglutaminase-like superfamily; transglutaminase complement(1662600..1665236) Clostridium clariflavum DSM 19732 11561814 YP_005046021.1 CDS Clocl_1447 NC_016627.1 1665258 1666466 R PFAM: Protein of unknown function DUF58; hypothetical protein complement(1665258..1666466) Clostridium clariflavum DSM 19732 11561815 YP_005046022.1 CDS Clocl_1448 NC_016627.1 1666459 1667409 R PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase complement(1666459..1667409) Clostridium clariflavum DSM 19732 11561816 YP_005046023.1 CDS Clocl_1449 NC_016627.1 1667541 1668491 R PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase; L-lactate dehydrogenase complement(1667541..1668491) Clostridium clariflavum DSM 19732 11561817 YP_005046024.1 CDS Clocl_1450 NC_016627.1 1668976 1670220 D PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA-like protein 1668976..1670220 Clostridium clariflavum DSM 19732 11561818 YP_005046025.1 CDS Clocl_1451 NC_016627.1 1670325 1671896 D PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 1670325..1671896 Clostridium clariflavum DSM 19732 11561819 YP_005046026.1 CDS Clocl_1452 NC_016627.1 1672148 1673206 D PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; protein RecA 1672148..1673206 Clostridium clariflavum DSM 19732 11561820 YP_005046027.1 CDS Clocl_1453 NC_016627.1 1673524 1674489 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein 1673524..1674489 Clostridium clariflavum DSM 19732 11561821 YP_005046028.1 CDS Clocl_1454 NC_016627.1 1674491 1675354 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; membrane protease subunit, stomatin/prohibitin 1674491..1675354 Clostridium clariflavum DSM 19732 11561822 YP_005046029.1 CDS Clocl_1455 NC_016627.1 1675563 1677431 D PFAM: Bacillus/Clostridium GerA spore germination protein; manually curated; spore germination protein, GerA family 1675563..1677431 Clostridium clariflavum DSM 19732 11561823 YP_005046030.1 CDS Clocl_1456 NC_016627.1 1677415 1678608 D PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease); spore germination protein, amino acid permease 1677415..1678608 Clostridium clariflavum DSM 19732 11561824 YP_005046031.1 CDS Clocl_1457 NC_016627.1 1678592 1679881 D PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family; germination protein, Ger(X)C family 1678592..1679881 Clostridium clariflavum DSM 19732 11561825 YP_005046032.1 CDS Clocl_1458 NC_016627.1 1679906 1680085 D hypothetical protein 1679906..1680085 Clostridium clariflavum DSM 19732 11561826 YP_005046033.1 CDS Clocl_1459 NC_016627.1 1680216 1681133 D PFAM: CoA enzyme activase uncharacterised domain (DUF2229); hypothetical protein 1680216..1681133 Clostridium clariflavum DSM 19732 11561827 YP_005046034.1 CDS Clocl_1460 NC_016627.1 1681141 1682262 D hypothetical protein 1681141..1682262 Clostridium clariflavum DSM 19732 11561828 YP_005046035.1 CDS Clocl_1461 NC_016627.1 1682456 1684606 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; manually curated; PAS/PAC sensor signal transduction histidine kinase 1682456..1684606 Clostridium clariflavum DSM 19732 11561829 YP_005046036.1 CDS Clocl_1463 NC_016627.1 1685048 1685863 D PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1685048..1685863 Clostridium clariflavum DSM 19732 11561831 YP_005046037.1 CDS Clocl_1464 NC_016627.1 1685875 1686315 D PFAM: RNase H; ribonuclease HI 1685875..1686315 Clostridium clariflavum DSM 19732 11561832 YP_005046038.1 CDS Clocl_1465 NC_016627.1 1686330 1686878 D PFAM: NUDIX domain; ADP-ribose pyrophosphatase 1686330..1686878 Clostridium clariflavum DSM 19732 11561833 YP_005046039.1 CDS Clocl_1466 NC_016627.1 1687210 1687848 D PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M; stage II sporulation protein M 1687210..1687848 Clostridium clariflavum DSM 19732 11561834 YP_005046040.1 CDS Clocl_1467 NC_016627.1 1688215 1689099 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerD 1688215..1689099 Clostridium clariflavum DSM 19732 11561835 YP_005046041.1 CDS Clocl_1468 NC_016627.1 1689395 1690561 D PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase; phosphopentomutase 1689395..1690561 Clostridium clariflavum DSM 19732 11561836 YP_005046042.1 CDS Clocl_1469 NC_016627.1 1690582 1691883 D PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase; pyrimidine-nucleoside phosphorylase 1690582..1691883 Clostridium clariflavum DSM 19732 11561837 YP_005046043.1 CDS Clocl_1470 NC_016627.1 1691991 1693187 D PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 1691991..1693187 Clostridium clariflavum DSM 19732 11561838 YP_005046044.1 CDS Clocl_1471 NC_016627.1 1693517 1694548 D PFAM: Membrane domain of glycerophosphoryl diester phosphodiesterase; manually curated; glycerophosphoryl diester phosphodiesterase-like protein 1693517..1694548 Clostridium clariflavum DSM 19732 11561839 YP_005046045.1 CDS Clocl_1472 NC_016627.1 1694541 1695293 D hypothetical protein 1694541..1695293 Clostridium clariflavum DSM 19732 11561840 YP_005046046.1 CDS Clocl_1473 NC_016627.1 1695326 1696342 D hypothetical protein 1695326..1696342 Clostridium clariflavum DSM 19732 11561841 YP_005046047.1 CDS Clocl_1474 NC_016627.1 1696342 1697334 D PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 1696342..1697334 Clostridium clariflavum DSM 19732 11561842 YP_005046048.1 CDS Clocl_1475 NC_016627.1 1697361 1698671 D PFAM: Protein of unknown function DUF58; hypothetical protein 1697361..1698671 Clostridium clariflavum DSM 19732 11561843 YP_005046049.1 CDS Clocl_1477 NC_016627.1 1699928 1700683 D PFAM: RDD family; manually curated; putative membrane protein/domain protein 1699928..1700683 Clostridium clariflavum DSM 19732 11561845 YP_005046050.1 CDS Clocl_1478 NC_016627.1 1701524 1702594 R PFAM: Integrase core domain; transposase, IS30 family complement(1701524..1702594) Clostridium clariflavum DSM 19732 11561846 YP_005046051.1 CDS Clocl_1480 NC_016627.1 1703037 1705130 D PFAM: Domain of unknown function (DUF303); Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; CBM6-containing protein,glycosyl hydrolase family 11,dockerin-like protein 1703037..1705130 Clostridium clariflavum DSM 19732 11561848 YP_005046052.1 CDS Clocl_1481 NC_016627.1 1705574 1706887 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 1705574..1706887 Clostridium clariflavum DSM 19732 11561849 YP_005046053.1 CDS Clocl_1482 NC_016627.1 1707087 1708916 D PFAM: Peptidase family M28; putative aminopeptidase 1707087..1708916 Clostridium clariflavum DSM 19732 11561850 YP_005046054.1 CDS Clocl_1483 NC_016627.1 1708938 1711568 D PFAM: DHH family; CBS domain; Poly A polymerase head domain; tRNA nucleotidyltransferase/poly(A) polymerase 1708938..1711568 Clostridium clariflavum DSM 19732 11561851 YP_005046055.1 CDS Clocl_1484 NC_016627.1 1711572 1712228 D PFAM: Peptidase family M50; Zn-dependent protease 1711572..1712228 Clostridium clariflavum DSM 19732 11561852 YP_005046056.1 CDS Clocl_1485 NC_016627.1 1712360 1713388 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; manually curated; tryptophanyl-tRNA synthetase 1712360..1713388 Clostridium clariflavum DSM 19732 11561853 YP_005046057.1 CDS Clocl_1486 NC_016627.1 1713442 1714236 D PFAM: ScpA/B protein; hypothetical protein 1713442..1714236 Clostridium clariflavum DSM 19732 11561854 YP_005046058.1 CDS Clocl_1487 NC_016627.1 1714292 1714882 D PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; segregation and condensation protein B 1714292..1714882 Clostridium clariflavum DSM 19732 11561855 YP_005046059.1 CDS Clocl_1488 NC_016627.1 1714879 1715631 D PFAM: Protein of unknown function (DUF2953); manually curated; hypothetical protein 1714879..1715631 Clostridium clariflavum DSM 19732 11561856 YP_005046060.1 CDS Clocl_1489 NC_016627.1 1715751 1716236 D PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ; manually curated; sporulation protein YtfJ 1715751..1716236 Clostridium clariflavum DSM 19732 11561857 YP_005046061.1 CDS Clocl_1490 NC_016627.1 1716425 1717138 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 1716425..1717138 Clostridium clariflavum DSM 19732 11561858 YP_005046062.1 CDS Clocl_1491 NC_016627.1 1717253 1717429 R PFAM: Domain of Unknown Function (DUF1540); hypothetical protein complement(1717253..1717429) Clostridium clariflavum DSM 19732 11561859 YP_005046063.1 CDS Clocl_1492 NC_016627.1 1717631 1718458 D PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; spermidine synthase 1717631..1718458 Clostridium clariflavum DSM 19732 11561860 YP_005046064.1 CDS Clocl_1493 NC_016627.1 1718469 1719338 D PFAM: Arginase family; TIGRFAM: agmatinase; agmatinase 1718469..1719338 Clostridium clariflavum DSM 19732 11561861 YP_005046065.1 CDS Clocl_1494 NC_016627.1 1719567 1720133 D PFAM: Putative rRNA methylase; rRNA methylase 1719567..1720133 Clostridium clariflavum DSM 19732 11561862 YP_005046066.1 CDS Clocl_1495 NC_016627.1 1720217 1720948 R PFAM: PilZ domain; PilZ domain-containing protein complement(1720217..1720948) Clostridium clariflavum DSM 19732 11561863 YP_005046067.1 CDS Clocl_1496 NC_016627.1 1721267 1722817 D PFAM: Carboxyl transferase domain; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1721267..1722817 Clostridium clariflavum DSM 19732 11561864 YP_005046068.1 CDS Clocl_1497 NC_016627.1 1722920 1723090 D hypothetical protein 1722920..1723090 Clostridium clariflavum DSM 19732 11561865 YP_005046069.1 CDS Clocl_1498 NC_016627.1 1723104 1723502 D PFAM: Biotin-requiring enzyme; biotin carboxyl carrier protein 1723104..1723502 Clostridium clariflavum DSM 19732 11561866 YP_005046070.1 CDS Clocl_1499 NC_016627.1 1723603 1725000 D PFAM: HMGL-like; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; pyruvate/oxaloacetate carboxyltransferase 1723603..1725000 Clostridium clariflavum DSM 19732 11561867 YP_005046071.1 CDS Clocl_1500 NC_016627.1 1725055 1725693 R hypothetical protein complement(1725055..1725693) Clostridium clariflavum DSM 19732 11561868 YP_005046072.1 CDS Clocl_1501 NC_016627.1 1725990 1728326 D PFAM: Fibronectin type III domain; fibronectin type III domain-containing protein 1725990..1728326 Clostridium clariflavum DSM 19732 11561869 YP_005046073.1 CDS Clocl_1502 NC_016627.1 1728338 1737262 D PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 1728338..1737262 Clostridium clariflavum DSM 19732 11561870 YP_005046074.1 CDS Clocl_1503 NC_016627.1 1737275 1737712 D hypothetical protein 1737275..1737712 Clostridium clariflavum DSM 19732 11561871 YP_005046075.1 CDS Clocl_1504 NC_016627.1 1737914 1738198 R hypothetical protein complement(1737914..1738198) Clostridium clariflavum DSM 19732 11561872 YP_005046076.1 CDS Clocl_1505 NC_016627.1 1738195 1739799 R PFAM: Transposase IS66 family; transposase complement(1738195..1739799) Clostridium clariflavum DSM 19732 11561873 YP_005046077.1 CDS Clocl_1506 NC_016627.1 1739863 1740216 R PFAM: IS66 Orf2 like protein; transposase complement(1739863..1740216) Clostridium clariflavum DSM 19732 11561874 YP_005046078.1 CDS Clocl_1507 NC_016627.1 1740213 1740566 R PFAM: Transposase; Transposase complement(1740213..1740566) Clostridium clariflavum DSM 19732 11561875 YP_005046079.1 CDS Clocl_1508 NC_016627.1 1740708 1741097 D hypothetical protein 1740708..1741097 Clostridium clariflavum DSM 19732 11561876 YP_005046080.1 CDS Clocl_1509 NC_016627.1 1741090 1741227 D PFAM: Mu-like prophage protein Com; Mu-like prophage protein Com 1741090..1741227 Clostridium clariflavum DSM 19732 11561877 YP_005046081.1 CDS Clocl_1510 NC_016627.1 1741360 1743600 D PFAM: Poxvirus D5 protein-like; D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain; phage/plasmid primase, P4 family, C-terminal domain protein 1741360..1743600 Clostridium clariflavum DSM 19732 11561878 YP_005046082.1 CDS Clocl_1511 NC_016627.1 1743916 1745229 D PFAM: Phage capsid family; putative phage phi-C31 gp36 major capsid-like protein 1743916..1745229 Clostridium clariflavum DSM 19732 11561879 YP_005046083.1 CDS Clocl_1512 NC_016627.1 1745491 1745856 D hypothetical protein 1745491..1745856 Clostridium clariflavum DSM 19732 11561880 YP_005046084.1 CDS Clocl_1513 NC_016627.1 1746196 1747440 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 1746196..1747440 Clostridium clariflavum DSM 19732 11561881 YP_005046085.1 CDS Clocl_1515 NC_016627.1 1747943 1748500 D hypothetical protein 1747943..1748500 Clostridium clariflavum DSM 19732 11561883 YP_005046086.1 CDS Clocl_1516 NC_016627.1 1748689 1749042 D PFAM: Transposase; Transposase 1748689..1749042 Clostridium clariflavum DSM 19732 11561884 YP_005046087.1 CDS Clocl_1517 NC_016627.1 1749039 1749392 D PFAM: IS66 Orf2 like protein; transposase 1749039..1749392 Clostridium clariflavum DSM 19732 11561885 YP_005046088.1 CDS Clocl_1519 NC_016627.1 1751064 1751348 D hypothetical protein 1751064..1751348 Clostridium clariflavum DSM 19732 11561887 YP_005046089.1 CDS Clocl_1520 NC_016627.1 1751383 1753350 D PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 1751383..1753350 Clostridium clariflavum DSM 19732 11561888 YP_005046090.1 CDS Clocl_1521 NC_016627.1 1753370 1753663 D hypothetical protein 1753370..1753663 Clostridium clariflavum DSM 19732 11561889 YP_005046091.1 CDS Clocl_1522 NC_016627.1 1753816 1754283 D PFAM: Macro domain; putative phosphatase, C-terminal domain of histone macro H2A1 like protein 1753816..1754283 Clostridium clariflavum DSM 19732 11561890 YP_005046092.1 CDS Clocl_1523 NC_016627.1 1754369 1754641 D hypothetical protein 1754369..1754641 Clostridium clariflavum DSM 19732 11561891 YP_005046093.1 CDS Clocl_1524 NC_016627.1 1754778 1755089 D hypothetical protein 1754778..1755089 Clostridium clariflavum DSM 19732 11561892 YP_005046094.1 CDS Clocl_1526 NC_016627.1 1759822 1760211 D hypothetical protein 1759822..1760211 Clostridium clariflavum DSM 19732 11561894 YP_005046095.1 CDS Clocl_1527 NC_016627.1 1760401 1760754 D PFAM: Transposase; Transposase 1760401..1760754 Clostridium clariflavum DSM 19732 11561895 YP_005046096.1 CDS Clocl_1528 NC_016627.1 1760751 1761104 D PFAM: IS66 Orf2 like protein; transposase 1760751..1761104 Clostridium clariflavum DSM 19732 11561896 YP_005046097.1 CDS Clocl_1530 NC_016627.1 1762771 1763055 D hypothetical protein 1762771..1763055 Clostridium clariflavum DSM 19732 11561898 YP_005046098.1 CDS Clocl_1532 NC_016627.1 1763657 1764439 D hypothetical protein 1763657..1764439 Clostridium clariflavum DSM 19732 11561900 YP_005046099.1 CDS Clocl_1533 NC_016627.1 1764455 1765084 D hypothetical protein 1764455..1765084 Clostridium clariflavum DSM 19732 11561901 YP_005046100.1 CDS Clocl_1538 NC_016627.1 1767095 1767289 D hypothetical protein 1767095..1767289 Clostridium clariflavum DSM 19732 11561906 YP_005046101.1 CDS Clocl_1539 NC_016627.1 1767294 1767749 D hypothetical protein 1767294..1767749 Clostridium clariflavum DSM 19732 11561907 YP_005046102.1 CDS Clocl_1540 NC_016627.1 1768331 1768528 D hypothetical protein 1768331..1768528 Clostridium clariflavum DSM 19732 11561908 YP_005046103.1 CDS Clocl_1541 NC_016627.1 1768943 1769959 D hypothetical protein 1768943..1769959 Clostridium clariflavum DSM 19732 11561909 YP_005046104.1 CDS Clocl_1542 NC_016627.1 1770595 1771986 R PFAM: Transposase DDE domain; transposase family protein complement(1770595..1771986) Clostridium clariflavum DSM 19732 11561910 YP_005046105.1 CDS Clocl_1543 NC_016627.1 1772414 1777759 D PFAM: Glycosyl hydrolase family 10; Carbohydrate binding domain; Domain of unknown function (DUF1083); S-layer homology domain; beta-1,4-xylanase 1772414..1777759 Clostridium clariflavum DSM 19732 11561911 YP_005046106.1 CDS Clocl_1544 NC_016627.1 1778214 1778498 R hypothetical protein complement(1778214..1778498) Clostridium clariflavum DSM 19732 11561912 YP_005046107.1 CDS Clocl_1546 NC_016627.1 1780169 1780522 R PFAM: IS66 Orf2 like protein; transposase complement(1780169..1780522) Clostridium clariflavum DSM 19732 11561914 YP_005046108.1 CDS Clocl_1547 NC_016627.1 1780519 1780872 R PFAM: Transposase; Transposase complement(1780519..1780872) Clostridium clariflavum DSM 19732 11561915 YP_005046109.1 CDS Clocl_1548 NC_016627.1 1781019 1783049 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 1781019..1783049 Clostridium clariflavum DSM 19732 11561916 YP_005046110.1 CDS Clocl_1549 NC_016627.1 1783189 1784793 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; CHASE3 domain; methyl-accepting chemotaxis protein complement(1783189..1784793) Clostridium clariflavum DSM 19732 11561917 YP_005046111.1 CDS Clocl_1550 NC_016627.1 1784819 1785169 R PFAM: CHASE3 domain; CHASE3 domain protein complement(1784819..1785169) Clostridium clariflavum DSM 19732 11561918 YP_005046112.1 CDS Clocl_1551 NC_016627.1 1785714 1786775 D PFAM: Domain of unknown function (DUF303); Dockerin type I repeat; dockerin-like protein 1785714..1786775 Clostridium clariflavum DSM 19732 11561919 YP_005046113.1 CDS Clocl_1552 NC_016627.1 1786812 1787315 D PFAM: Acetyltransferase (GNAT) family; sortase 1786812..1787315 Clostridium clariflavum DSM 19732 11561920 YP_005046114.1 CDS Clocl_1553 NC_016627.1 1787417 1787920 D PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family; hypothetical protein 1787417..1787920 Clostridium clariflavum DSM 19732 11561921 YP_005046115.1 CDS Clocl_1554 NC_016627.1 1788122 1789864 D PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 1788122..1789864 Clostridium clariflavum DSM 19732 11561922 YP_005046116.1 CDS Clocl_1556 NC_016627.1 1791364 1792209 R PFAM: Dockerin type I repeat; hypothetical protein complement(1791364..1792209) Clostridium clariflavum DSM 19732 11561924 YP_005046117.1 CDS Clocl_1557 NC_016627.1 1792743 1793513 D PFAM: ThiF family; dinucleotide-utilizing protein 1792743..1793513 Clostridium clariflavum DSM 19732 11561925 YP_005046118.1 CDS Clocl_1558 NC_016627.1 1793749 1794543 R hypothetical protein complement(1793749..1794543) Clostridium clariflavum DSM 19732 11561926 YP_005046119.1 CDS Clocl_1559 NC_016627.1 1794537 1795235 R PFAM: ABC transporter; multidrug ABC transporter ATPase complement(1794537..1795235) Clostridium clariflavum DSM 19732 11561927 YP_005046120.1 CDS Clocl_1560 NC_016627.1 1795232 1795606 R PFAM: Bacterial regulatory proteins, gntR family; putative transcriptional regulator complement(1795232..1795606) Clostridium clariflavum DSM 19732 11561928 YP_005046121.1 CDS Clocl_1561 NC_016627.1 1796724 1798436 D PFAM: Protein of unknown function (DUF1538); hypothetical protein 1796724..1798436 Clostridium clariflavum DSM 19732 11561929 YP_005046122.1 CDS Clocl_1562 NC_016627.1 1798429 1798743 D hypothetical protein 1798429..1798743 Clostridium clariflavum DSM 19732 11561930 YP_005046123.1 CDS Clocl_1563 NC_016627.1 1798758 1799102 D nitrogen regulatory protein P-II family 1798758..1799102 Clostridium clariflavum DSM 19732 11561931 YP_005046124.1 CDS Clocl_1564 NC_016627.1 1799726 1802323 D PFAM: Dockerin type I repeat; PKD domain; PDK repeat-containing protein 1799726..1802323 Clostridium clariflavum DSM 19732 11561932 YP_005046125.1 CDS Clocl_1565 NC_016627.1 1802525 1804282 R PFAM: Transglycosylase SLT domain; lytic murein transglycosylase complement(1802525..1804282) Clostridium clariflavum DSM 19732 11561933 YP_005046126.1 CDS Clocl_1566 NC_016627.1 1804980 1807853 D PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein 1804980..1807853 Clostridium clariflavum DSM 19732 11561934 YP_005046127.1 CDS Clocl_1567 NC_016627.1 1807866 1809998 D PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; thioredoxin domain-containing protein 1807866..1809998 Clostridium clariflavum DSM 19732 11561935 YP_005046128.1 CDS Clocl_1568 NC_016627.1 1810378 1810893 D hypothetical protein 1810378..1810893 Clostridium clariflavum DSM 19732 11561936 YP_005046129.1 CDS Clocl_1569 NC_016627.1 1811086 1811337 D TIGRFAM: putative iron-only hydrogenase system regulator; putative iron-only hydrogenase system regulator 1811086..1811337 Clostridium clariflavum DSM 19732 11561937 YP_005046130.1 CDS Clocl_1570 NC_016627.1 1811658 1813022 D PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydG; thiazole biosynthesis protein ThiH; iron-only hydrogenase maturation protein HydG 1811658..1813022 Clostridium clariflavum DSM 19732 11561938 YP_005046131.1 CDS Clocl_1571 NC_016627.1 1813218 1814507 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(1813218..1814507) Clostridium clariflavum DSM 19732 11561939 YP_005046132.1 CDS Clocl_1572 NC_016627.1 1814917 1816269 D PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; Protein of unknown function (DUF3343); TIGRFAM: iron-only hydrogenase maturation rSAM protein HydE; iron-only hydrogenase maturation protein HydE 1814917..1816269 Clostridium clariflavum DSM 19732 11561940 YP_005046133.1 CDS Clocl_1573 NC_016627.1 1816269 1817672 D PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase; aspartate ammonia-lyase 1816269..1817672 Clostridium clariflavum DSM 19732 11561941 YP_005046134.1 CDS Clocl_1574 NC_016627.1 1817674 1818897 D PFAM: GTPase of unknown function; TIGRFAM: hydrogenase maturation GTPase HydF; small GTP-binding protein domain; hydrogenase maturation GTPase HydF 1817674..1818897 Clostridium clariflavum DSM 19732 11561942 YP_005046135.1 CDS Clocl_1575 NC_016627.1 1819036 1820181 D PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein; cysteine desulfurase 1819036..1820181 Clostridium clariflavum DSM 19732 11561943 YP_005046136.1 CDS Clocl_1576 NC_016627.1 1820379 1821560 D PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; Tfp pilus assembly protein, ATPase PilM 1820379..1821560 Clostridium clariflavum DSM 19732 11561944 YP_005046137.1 CDS Clocl_1577 NC_016627.1 1821750 1821908 D hypothetical protein 1821750..1821908 Clostridium clariflavum DSM 19732 11561945 YP_005046138.1 CDS Clocl_1578 NC_016627.1 1821999 1822586 R hypothetical protein complement(1821999..1822586) Clostridium clariflavum DSM 19732 11561946 YP_005046139.1 CDS Clocl_1579 NC_016627.1 1822955 1823605 D hypothetical protein 1822955..1823605 Clostridium clariflavum DSM 19732 11561947 YP_005046140.1 CDS Clocl_1580 NC_016627.1 1823602 1824936 R PFAM: PTS system sugar-specific permease component; phosphotransferase system, galactitol-specific IIC component complement(1823602..1824936) Clostridium clariflavum DSM 19732 11561948 YP_005046141.1 CDS Clocl_1581 NC_016627.1 1825192 1825686 D hypothetical protein 1825192..1825686 Clostridium clariflavum DSM 19732 11561949 YP_005046142.1 CDS Clocl_1582 NC_016627.1 1825897 1826664 D PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase 1825897..1826664 Clostridium clariflavum DSM 19732 11561950 YP_005046143.1 CDS Clocl_1583 NC_016627.1 1826657 1827475 D PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 1826657..1827475 Clostridium clariflavum DSM 19732 11561951 YP_005046144.1 CDS Clocl_1584 NC_016627.1 1827562 1828554 D PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 1827562..1828554 Clostridium clariflavum DSM 19732 11561952 YP_005046145.1 CDS Clocl_1585 NC_016627.1 1828966 1829160 D hypothetical protein 1828966..1829160 Clostridium clariflavum DSM 19732 11561953 YP_005046146.1 CDS Clocl_1586 NC_016627.1 1829238 1830836 D PFAM: Subtilase family; subtilisin-like serine protease 1829238..1830836 Clostridium clariflavum DSM 19732 11561954 YP_005046147.1 CDS Clocl_1587 NC_016627.1 1830827 1842016 D PFAM: Protein of unknown function (DUF1557); Fibronectin type III domain; CARDB; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region; fibronectin type III domain-containing protein,CARDB domain-containing protein 1830827..1842016 Clostridium clariflavum DSM 19732 11561955 YP_005046148.1 CDS Clocl_1588 NC_016627.1 1842033 1842521 D hypothetical protein 1842033..1842521 Clostridium clariflavum DSM 19732 11561956 YP_005046149.1 CDS Clocl_1590 NC_016627.1 1843464 1844132 D hypothetical protein 1843464..1844132 Clostridium clariflavum DSM 19732 11561958 YP_005046150.1 CDS Clocl_1591 NC_016627.1 1844153 1844608 D hypothetical protein 1844153..1844608 Clostridium clariflavum DSM 19732 11561959 YP_005046151.1 CDS Clocl_1592 NC_016627.1 1844743 1844904 R hypothetical protein complement(1844743..1844904) Clostridium clariflavum DSM 19732 11561960 YP_005046152.1 CDS Clocl_1594 NC_016627.1 1846745 1848487 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1846745..1848487 Clostridium clariflavum DSM 19732 11561962 YP_005046153.1 CDS Clocl_1595 NC_016627.1 1848489 1848941 D hypothetical protein 1848489..1848941 Clostridium clariflavum DSM 19732 11561963 YP_005046154.1 CDS Clocl_1596 NC_016627.1 1848971 1849345 D hypothetical protein 1848971..1849345 Clostridium clariflavum DSM 19732 11561964 YP_005046155.1 CDS Clocl_1597 NC_016627.1 1849913 1851457 D PFAM: Integrase core domain; transposase 1849913..1851457 Clostridium clariflavum DSM 19732 11561965 YP_005046156.1 CDS Clocl_1598 NC_016627.1 1851454 1852230 D PFAM: IstB-like ATP binding protein; DNA replication protein 1851454..1852230 Clostridium clariflavum DSM 19732 11561966 YP_005046157.1 CDS Clocl_1601 NC_016627.1 1853432 1853884 D hypothetical protein 1853432..1853884 Clostridium clariflavum DSM 19732 11561969 YP_005046158.1 CDS Clocl_1602 NC_016627.1 1853914 1854288 D hypothetical protein 1853914..1854288 Clostridium clariflavum DSM 19732 11561970 YP_005046159.1 CDS Clocl_1603 NC_016627.1 1854625 1854978 D hypothetical protein 1854625..1854978 Clostridium clariflavum DSM 19732 11561971 YP_005046160.1 CDS Clocl_1604 NC_016627.1 1854975 1855328 D PFAM: IS66 Orf2 like protein; transposase 1854975..1855328 Clostridium clariflavum DSM 19732 11561972 YP_005046161.1 CDS Clocl_1605 NC_016627.1 1855404 1857010 D PFAM: Transposase IS66 family; manually curated; transposase join(1855404..1855655,1855655..1857010) Clostridium clariflavum DSM 19732 11561973 YP_005046162.1 CDS Clocl_1606 NC_016627.1 1857129 1857290 D hypothetical protein 1857129..1857290 Clostridium clariflavum DSM 19732 11561974 YP_005046163.1 CDS Clocl_1607 NC_016627.1 1857433 1858038 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1857433..1858038 Clostridium clariflavum DSM 19732 11561975 YP_005046164.1 CDS Clocl_1608 NC_016627.1 1858038 1858763 D hypothetical protein 1858038..1858763 Clostridium clariflavum DSM 19732 11561976 YP_005046165.1 CDS Clocl_1609 NC_016627.1 1858779 1859246 D hypothetical protein 1858779..1859246 Clostridium clariflavum DSM 19732 11561977 YP_005046166.1 CDS Clocl_1610 NC_016627.1 1859403 1859762 D hypothetical protein 1859403..1859762 Clostridium clariflavum DSM 19732 11561978 YP_005046167.1 CDS Clocl_1612 NC_016627.1 1861675 1862304 D hypothetical protein 1861675..1862304 Clostridium clariflavum DSM 19732 11561980 YP_005046168.1 CDS Clocl_1614 NC_016627.1 1862672 1863271 D hypothetical protein 1862672..1863271 Clostridium clariflavum DSM 19732 11561982 YP_005046169.1 CDS Clocl_1615 NC_016627.1 1863274 1864248 D hypothetical protein 1863274..1864248 Clostridium clariflavum DSM 19732 11561983 YP_005046170.1 CDS Clocl_1616 NC_016627.1 1864860 1866077 R PFAM: Transposase, Mutator family; transposase complement(1864860..1866077) Clostridium clariflavum DSM 19732 11561984 YP_005046171.1 CDS Clocl_1617 NC_016627.1 1866220 1866504 R hypothetical protein complement(1866220..1866504) Clostridium clariflavum DSM 19732 11561985 YP_005046172.1 CDS Clocl_1619 NC_016627.1 1868174 1868527 R PFAM: IS66 Orf2 like protein; transposase complement(1868174..1868527) Clostridium clariflavum DSM 19732 11561987 YP_005046173.1 CDS Clocl_1620 NC_016627.1 1868524 1868877 R PFAM: Transposase; Transposase complement(1868524..1868877) Clostridium clariflavum DSM 19732 11561988 YP_005046174.1 CDS Clocl_1621 NC_016627.1 1869043 1869282 D hypothetical protein 1869043..1869282 Clostridium clariflavum DSM 19732 11561989 YP_005046175.1 CDS Clocl_1623 NC_016627.1 1870189 1870704 D hypothetical protein 1870189..1870704 Clostridium clariflavum DSM 19732 11561991 YP_005046176.1 CDS Clocl_1624 NC_016627.1 1871077 1871370 D PFAM: Transposase; transposase 1871077..1871370 Clostridium clariflavum DSM 19732 11561992 YP_005046177.1 CDS Clocl_1625 NC_016627.1 1871330 1872229 D PFAM: Integrase core domain; transposase 1871330..1872229 Clostridium clariflavum DSM 19732 11561993 YP_005046178.1 CDS Clocl_1626 NC_016627.1 1872543 1873613 D PFAM: Integrase core domain; transposase, IS30 family 1872543..1873613 Clostridium clariflavum DSM 19732 11561994 YP_005046179.1 CDS Clocl_1628 NC_016627.1 1874975 1875346 D hypothetical protein 1874975..1875346 Clostridium clariflavum DSM 19732 11561996 YP_005046180.1 CDS Clocl_1629 NC_016627.1 1875512 1876489 D hypothetical protein 1875512..1876489 Clostridium clariflavum DSM 19732 11561997 YP_005046181.1 CDS Clocl_1632 NC_016627.1 1877926 1878363 D hypothetical protein 1877926..1878363 Clostridium clariflavum DSM 19732 11562000 YP_005046182.1 CDS Clocl_1633 NC_016627.1 1878606 1878911 D hypothetical protein 1878606..1878911 Clostridium clariflavum DSM 19732 11562001 YP_005046183.1 CDS Clocl_1634 NC_016627.1 1879083 1879346 D hypothetical protein 1879083..1879346 Clostridium clariflavum DSM 19732 11562002 YP_005046184.1 CDS Clocl_1635 NC_016627.1 1879473 1879961 D hypothetical protein 1879473..1879961 Clostridium clariflavum DSM 19732 11562003 YP_005046185.1 CDS Clocl_1636 NC_016627.1 1880131 1881468 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1880131..1881468 Clostridium clariflavum DSM 19732 11562004 YP_005046186.1 CDS Clocl_1637 NC_016627.1 1881493 1882122 D hypothetical protein 1881493..1882122 Clostridium clariflavum DSM 19732 11562005 YP_005046187.1 CDS Clocl_1639 NC_016627.1 1882826 1883179 D PFAM: Transposase; Transposase 1882826..1883179 Clostridium clariflavum DSM 19732 11562007 YP_005046188.1 CDS Clocl_1640 NC_016627.1 1883176 1883529 D PFAM: IS66 Orf2 like protein; transposase 1883176..1883529 Clostridium clariflavum DSM 19732 11562008 YP_005046189.1 CDS Clocl_1642 NC_016627.1 1885377 1886408 R PFAM: Transposase IS66 family; Insertion element protein; transposase complement(1885377..1886408) Clostridium clariflavum DSM 19732 11562010 YP_005046190.1 CDS Clocl_1643 NC_016627.1 1886531 1886815 D hypothetical protein 1886531..1886815 Clostridium clariflavum DSM 19732 11562011 YP_005046191.1 CDS Clocl_1644 NC_016627.1 1887040 1887843 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1887040..1887843 Clostridium clariflavum DSM 19732 11562012 YP_005046192.1 CDS Clocl_1645 NC_016627.1 1887843 1888568 D hypothetical protein 1887843..1888568 Clostridium clariflavum DSM 19732 11562013 YP_005046193.1 CDS Clocl_1646 NC_016627.1 1888584 1889051 D hypothetical protein 1888584..1889051 Clostridium clariflavum DSM 19732 11562014 YP_005046194.1 CDS Clocl_1647 NC_016627.1 1889208 1889567 D hypothetical protein 1889208..1889567 Clostridium clariflavum DSM 19732 11562015 YP_005046195.1 CDS Clocl_1648 NC_016627.1 1889965 1891707 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1889965..1891707 Clostridium clariflavum DSM 19732 11562016 YP_005046196.1 CDS Clocl_1649 NC_016627.1 1891709 1892161 D hypothetical protein 1891709..1892161 Clostridium clariflavum DSM 19732 11562017 YP_005046197.1 CDS Clocl_1650 NC_016627.1 1892191 1892565 D hypothetical protein 1892191..1892565 Clostridium clariflavum DSM 19732 11562018 YP_005046198.1 CDS Clocl_1651 NC_016627.1 1892887 1894089 D PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1892887..1894089 Clostridium clariflavum DSM 19732 11562019 YP_005046199.1 CDS Clocl_1652 NC_016627.1 1894223 1895689 D PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; transposase 1894223..1895689 Clostridium clariflavum DSM 19732 11562020 YP_005046200.1 CDS Clocl_1653 NC_016627.1 1895707 1896477 D PFAM: IstB-like ATP binding protein; DNA replication protein 1895707..1896477 Clostridium clariflavum DSM 19732 11562021 YP_005046201.1 CDS Clocl_1654 NC_016627.1 1896684 1897229 R hypothetical protein complement(1896684..1897229) Clostridium clariflavum DSM 19732 11562022 YP_005046202.1 CDS Clocl_1655 NC_016627.1 1897742 1898929 D PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain; putative paraquat-inducible protein B 1897742..1898929 Clostridium clariflavum DSM 19732 11562023 YP_005046203.1 CDS Clocl_1656 NC_016627.1 1899151 1899432 D hypothetical protein 1899151..1899432 Clostridium clariflavum DSM 19732 11562024 YP_005046204.1 CDS Clocl_1657 NC_016627.1 1900377 1901696 D PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM additional 4Fe4S-binding domain protein 1900377..1901696 Clostridium clariflavum DSM 19732 11562025 YP_005046205.1 CDS Clocl_1658 NC_016627.1 1901772 1901945 D hypothetical protein 1901772..1901945 Clostridium clariflavum DSM 19732 11562026 YP_005046206.1 CDS Clocl_1659 NC_016627.1 1902209 1902325 D hypothetical protein 1902209..1902325 Clostridium clariflavum DSM 19732 11562027 YP_005046207.1 CDS Clocl_1660 NC_016627.1 1902736 1903317 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1902736..1903317 Clostridium clariflavum DSM 19732 11562028 YP_005046208.1 CDS Clocl_1661 NC_016627.1 1903505 1904368 D manually curated; hypothetical protein 1903505..1904368 Clostridium clariflavum DSM 19732 11562029 YP_005046209.1 CDS Clocl_1662 NC_016627.1 1904426 1904614 D manually curated; hypothetical protein 1904426..1904614 Clostridium clariflavum DSM 19732 11562030 YP_005046210.1 CDS Clocl_1664 NC_016627.1 1905331 1906164 D PFAM: 3D domain; hypothetical protein 1905331..1906164 Clostridium clariflavum DSM 19732 11562032 YP_005046211.1 CDS Clocl_1665 NC_016627.1 1906535 1907155 D PFAM: RecX family; hypothetical protein 1906535..1907155 Clostridium clariflavum DSM 19732 11562033 YP_005046212.1 CDS Clocl_1666 NC_016627.1 1907251 1907502 D hypothetical protein 1907251..1907502 Clostridium clariflavum DSM 19732 11562034 YP_005046213.1 CDS Clocl_1667 NC_016627.1 1907730 1908287 D PFAM: Domain of unknown function DUF; hypothetical protein 1907730..1908287 Clostridium clariflavum DSM 19732 11562035 YP_005046214.1 CDS Clocl_1668 NC_016627.1 1908461 1909210 D PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1908461..1909210 Clostridium clariflavum DSM 19732 11562036 YP_005046215.1 CDS Clocl_1669 NC_016627.1 1909399 1910106 D PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1909399..1910106 Clostridium clariflavum DSM 19732 11562037 YP_005046216.1 CDS Clocl_1670 NC_016627.1 1910372 1911367 D PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 1910372..1911367 Clostridium clariflavum DSM 19732 11562038 YP_005046217.1 CDS Clocl_1671 NC_016627.1 1911504 1914413 R PFAM: Fibronectin type III domain; fibronectin type III domain-containing protein complement(1911504..1914413) Clostridium clariflavum DSM 19732 11562039 YP_005046218.1 CDS Clocl_1672 NC_016627.1 1914855 1915406 R hypothetical protein complement(1914855..1915406) Clostridium clariflavum DSM 19732 11562040 YP_005046219.1 CDS Clocl_1675 NC_016627.1 1916075 1916623 D PFAM: Nucleotidyltransferase domain; nucleotidyltransferase family protein 1916075..1916623 Clostridium clariflavum DSM 19732 11562043 YP_005046220.1 CDS Clocl_1676 NC_016627.1 1916891 1918285 D PFAM: Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1916891..1918285 Clostridium clariflavum DSM 19732 11562044 YP_005046221.1 CDS Clocl_1677 NC_016627.1 1918607 1919305 R PFAM: Methyltransferase domain; methyltransferase family protein complement(1918607..1919305) Clostridium clariflavum DSM 19732 11562045 YP_005046222.1 CDS Clocl_1681 NC_016627.1 1920074 1921093 D PFAM: M42 glutamyl aminopeptidase; peptidase family protein 1920074..1921093 Clostridium clariflavum DSM 19732 11562049 YP_005046223.1 CDS Clocl_1682 NC_016627.1 1921190 1922215 D PFAM: M42 glutamyl aminopeptidase; peptidase family protein 1921190..1922215 Clostridium clariflavum DSM 19732 11562050 YP_005046224.1 CDS Clocl_1683 NC_016627.1 1922275 1923252 D PFAM: M42 glutamyl aminopeptidase; peptidase family protein 1922275..1923252 Clostridium clariflavum DSM 19732 11562051 YP_005046225.1 CDS Clocl_1684 NC_016627.1 1923314 1924324 D hypothetical protein 1923314..1924324 Clostridium clariflavum DSM 19732 11562052 YP_005046226.1 CDS Clocl_1685 NC_016627.1 1924346 1925137 R PFAM: DUF218 domain; hypothetical protein complement(1924346..1925137) Clostridium clariflavum DSM 19732 11562053 YP_005046227.1 CDS Clocl_1686 NC_016627.1 1925504 1927129 D PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; putative exonuclease of the beta-lactamase fold involved in RNA processing 1925504..1927129 Clostridium clariflavum DSM 19732 11562054 YP_005046228.1 CDS Clocl_1687 NC_016627.1 1927656 1928327 D PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 1927656..1928327 Clostridium clariflavum DSM 19732 11562055 YP_005046229.1 CDS Clocl_1688 NC_016627.1 1928473 1929222 D PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/carnithine racemase 1928473..1929222 Clostridium clariflavum DSM 19732 11562056 YP_005046230.1 CDS Clocl_1690 NC_016627.1 1929990 1930697 D hypothetical protein 1929990..1930697 Clostridium clariflavum DSM 19732 11562058 YP_005046231.1 CDS Clocl_1692 NC_016627.1 1931511 1932809 D PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 1931511..1932809 Clostridium clariflavum DSM 19732 11562060 YP_005046232.1 CDS Clocl_1694 NC_016627.1 1933237 1933413 D hypothetical protein 1933237..1933413 Clostridium clariflavum DSM 19732 11562062 YP_005046233.1 CDS Clocl_1695 NC_016627.1 1933428 1935020 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction-modification system methyltransferase subunit 1933428..1935020 Clostridium clariflavum DSM 19732 11562063 YP_005046234.1 CDS Clocl_1696 NC_016627.1 1935017 1936093 D PFAM: Type I restriction modification DNA specificity domain; restriction endonuclease S subunit 1935017..1936093 Clostridium clariflavum DSM 19732 11562064 YP_005046235.1 CDS Clocl_1697 NC_016627.1 1936107 1937129 D hypothetical protein 1936107..1937129 Clostridium clariflavum DSM 19732 11562065 YP_005046236.1 CDS Clocl_1698 NC_016627.1 1937122 1940337 D PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; manually curated; HsdR family type I site-specific deoxyribonuclease 1937122..1940337 Clostridium clariflavum DSM 19732 11562066 YP_005046237.1 CDS Clocl_1699 NC_016627.1 1940413 1943229 D hypothetical protein 1940413..1943229 Clostridium clariflavum DSM 19732 11562067 YP_005046238.1 CDS Clocl_1700 NC_016627.1 1943226 1947989 D PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; helicase family protein with metal-binding cysteine cluster 1943226..1947989 Clostridium clariflavum DSM 19732 11562068 YP_005046239.1 CDS Clocl_1702 NC_016627.1 1948648 1949103 D PFAM: Transposase IS200 like; transposase 1948648..1949103 Clostridium clariflavum DSM 19732 11562070 YP_005046240.1 CDS Clocl_1703 NC_016627.1 1949359 1950831 D PFAM: Integrase core domain; transposase 1949359..1950831 Clostridium clariflavum DSM 19732 11562071 YP_005046241.1 CDS Clocl_1704 NC_016627.1 1950824 1951510 D PFAM: IstB-like ATP binding protein; DNA replication protein 1950824..1951510 Clostridium clariflavum DSM 19732 11562072 YP_005046242.1 CDS Clocl_1706 NC_016627.1 1952474 1953328 D phosphate ABC transporter substrate-binding protein 1952474..1953328 Clostridium clariflavum DSM 19732 11562074 YP_005046243.1 CDS Clocl_1707 NC_016627.1 1953398 1954252 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA; phosphate ABC transporter membrane protein 1953398..1954252 Clostridium clariflavum DSM 19732 11562075 YP_005046244.1 CDS Clocl_1708 NC_016627.1 1954252 1955127 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter membrane protein 1954252..1955127 Clostridium clariflavum DSM 19732 11562076 YP_005046245.1 CDS Clocl_1709 NC_016627.1 1955237 1955986 D PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein 1955237..1955986 Clostridium clariflavum DSM 19732 11562077 YP_005046246.1 CDS Clocl_1710 NC_016627.1 1955986 1956636 D PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 1955986..1956636 Clostridium clariflavum DSM 19732 11562078 YP_005046247.1 CDS Clocl_1711 NC_016627.1 1956633 1957307 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 1956633..1957307 Clostridium clariflavum DSM 19732 11562079 YP_005046248.1 CDS Clocl_1712 NC_016627.1 1957304 1958974 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain S-box 1957304..1958974 Clostridium clariflavum DSM 19732 11562080 YP_005046249.1 CDS Clocl_1713 NC_016627.1 1959282 1959821 D 2'-5' RNA ligase 1959282..1959821 Clostridium clariflavum DSM 19732 11562081 YP_005046250.1 CDS Clocl_1714 NC_016627.1 1960097 1960591 D hypothetical protein 1960097..1960591 Clostridium clariflavum DSM 19732 11562082 YP_005046251.1 CDS Clocl_1715 NC_016627.1 1961778 1962497 D PFAM: ABC transporter; multidrug ABC transporter ATPase 1961778..1962497 Clostridium clariflavum DSM 19732 11562083 YP_005046252.1 CDS Clocl_1716 NC_016627.1 1962494 1963147 D hypothetical protein 1962494..1963147 Clostridium clariflavum DSM 19732 11562084 YP_005046253.1 CDS Clocl_1717 NC_016627.1 1963162 1963602 D PFAM: Helix-turn-helix; SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; looped-hinge helix DNA binding domain, AbrB family 1963162..1963602 Clostridium clariflavum DSM 19732 11562085 YP_005046254.1 CDS Clocl_1718 NC_016627.1 1964015 1965193 D PFAM: Aldo/keto reductase family; putative oxidoreductase of aldo/keto reductase family 1964015..1965193 Clostridium clariflavum DSM 19732 11562086 YP_005046255.1 CDS Clocl_1719 NC_016627.1 1965429 1967171 D PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase 1965429..1967171 Clostridium clariflavum DSM 19732 11562087 YP_005046256.1 CDS Clocl_1720 NC_016627.1 1967390 1967806 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; cytidine deaminase complement(1967390..1967806) Clostridium clariflavum DSM 19732 11562088 YP_005046257.1 CDS Clocl_1721 NC_016627.1 1967862 1968797 R PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease complement(1967862..1968797) Clostridium clariflavum DSM 19732 11562089 YP_005046258.1 CDS Clocl_1722 NC_016627.1 1968797 1969915 R PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease complement(1968797..1969915) Clostridium clariflavum DSM 19732 11562090 YP_005046259.1 CDS Clocl_1723 NC_016627.1 1969899 1971452 R PFAM: ABC transporter; ABC transporter ATPase complement(1969899..1971452) Clostridium clariflavum DSM 19732 11562091 YP_005046260.1 CDS Clocl_1724 NC_016627.1 1971526 1972368 R PFAM: Radical SAM superfamily; TIGRFAM: glycine radical enzyme activase, YjjW family; glycine radical enzyme activase, YjjW family complement(1971526..1972368) Clostridium clariflavum DSM 19732 11562092 YP_005046261.1 CDS Clocl_1725 NC_016627.1 1972371 1973900 R PFAM: Protein of unknown function (DUF3029); TIGRFAM: glycine radical enzyme, YjjI family; glycine radical enzyme, YjjI family complement(1972371..1973900) Clostridium clariflavum DSM 19732 11562093 YP_005046262.1 CDS Clocl_1726 NC_016627.1 1973970 1975028 R PFAM: Basic membrane protein; putative ABC-type transport system, periplasmic component/surface lipoprotein complement(1973970..1975028) Clostridium clariflavum DSM 19732 11562094 YP_005046263.1 CDS Clocl_1727 NC_016627.1 1975112 1975822 R PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); purine-nucleoside phosphorylase, DeoD family complement(1975112..1975822) Clostridium clariflavum DSM 19732 11562095 YP_005046264.1 CDS Clocl_1729 NC_016627.1 1976261 1977031 D PFAM: Phosphorylase superfamily; uridine phosphorylase 1976261..1977031 Clostridium clariflavum DSM 19732 11562097 YP_005046265.1 CDS Clocl_1731 NC_016627.1 1977600 1978079 D PFAM: AIG2-like family; cation transport protein 1977600..1978079 Clostridium clariflavum DSM 19732 11562099 YP_005046266.1 CDS Clocl_1732 NC_016627.1 1978112 1979341 R PFAM: S-adenosylmethionine-dependent methyltransferase; putative SAM-dependent methyltransferase complement(1978112..1979341) Clostridium clariflavum DSM 19732 11562100 YP_005046267.1 CDS Clocl_1733 NC_016627.1 1979791 1981527 D PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; indolepyruvate ferredoxin oxidoreductase subunit alpha 1979791..1981527 Clostridium clariflavum DSM 19732 11562101 YP_005046268.1 CDS Clocl_1734 NC_016627.1 1981531 1982103 D PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; indolepyruvate ferredoxin oxidoreductase subunit beta 1981531..1982103 Clostridium clariflavum DSM 19732 11562102 YP_005046269.1 CDS Clocl_1735 NC_016627.1 1982156 1983460 D PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase; coenzyme F390 synthetase 1982156..1983460 Clostridium clariflavum DSM 19732 11562103 YP_005046270.1 CDS Clocl_1736 NC_016627.1 1983499 1983930 D PFAM: ACT domain; ACT domain-containing protein 1983499..1983930 Clostridium clariflavum DSM 19732 11562104 YP_005046271.1 CDS Clocl_1737 NC_016627.1 1984036 1985328 D PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; AAA ATPase 1984036..1985328 Clostridium clariflavum DSM 19732 11562105 YP_005046272.1 CDS Clocl_1738 NC_016627.1 1985509 1985796 R hypothetical protein complement(1985509..1985796) Clostridium clariflavum DSM 19732 11562106 YP_005046273.1 CDS Clocl_1739 NC_016627.1 1986134 1987000 D hypothetical protein 1986134..1987000 Clostridium clariflavum DSM 19732 11562107 YP_005046274.1 CDS Clocl_1740 NC_016627.1 1987298 1988725 D PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 1987298..1988725 Clostridium clariflavum DSM 19732 11562108 YP_005046275.1 CDS Clocl_1741 NC_016627.1 1988955 1989341 D PFAM: Protein of unknown function (DUF964); hypothetical protein 1988955..1989341 Clostridium clariflavum DSM 19732 11562109 YP_005046276.1 CDS Clocl_1742 NC_016627.1 1989458 1992076 D PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 1989458..1992076 Clostridium clariflavum DSM 19732 11562110 YP_005046277.1 CDS Clocl_1743 NC_016627.1 1992140 1994329 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; manually curated; DNA mismatch repair protein MutL 1992140..1994329 Clostridium clariflavum DSM 19732 11562111 YP_005046278.1 CDS Clocl_1744 NC_016627.1 1994517 1995458 D PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA isopentenyltransferase MiaA 1994517..1995458 Clostridium clariflavum DSM 19732 11562112 YP_005046279.1 CDS Clocl_1745 NC_016627.1 1995665 1995916 D PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein Hfq 1995665..1995916 Clostridium clariflavum DSM 19732 11562113 YP_005046280.1 CDS Clocl_1746 NC_016627.1 1996121 1996756 R PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; manually curated; SOS regulatory protein LexA complement(1996121..1996756) Clostridium clariflavum DSM 19732 11562114 YP_005046281.1 CDS Clocl_1747 NC_016627.1 1997052 1997339 D PFAM: LysM domain; LysM domain-containing protein 1997052..1997339 Clostridium clariflavum DSM 19732 11562115 YP_005046282.1 CDS Clocl_1748 NC_016627.1 1997662 1998330 D PFAM: TadE-like protein; TadE-like protein 1997662..1998330 Clostridium clariflavum DSM 19732 11562116 YP_005046283.1 CDS Clocl_1749 NC_016627.1 1998418 2001585 D manually curated; hypothetical protein 1998418..2001585 Clostridium clariflavum DSM 19732 11562117 YP_005046284.1 CDS Clocl_1750 NC_016627.1 2001638 2002861 D PFAM: TadE-like protein; TadE-like protein 2001638..2002861 Clostridium clariflavum DSM 19732 11562118 YP_005046285.1 CDS Clocl_1751 NC_016627.1 2003009 2003512 D PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; hypothetical protein 2003009..2003512 Clostridium clariflavum DSM 19732 11562119 YP_005046286.1 CDS Clocl_1752 NC_016627.1 2003786 2004367 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2003786..2004367 Clostridium clariflavum DSM 19732 11562120 YP_005046287.1 CDS Clocl_1753 NC_016627.1 2004371 2004793 D hypothetical protein 2004371..2004793 Clostridium clariflavum DSM 19732 11562121 YP_005046288.1 CDS Clocl_1754 NC_016627.1 2004797 2005441 D PFAM: Protein of unknown function (DUF2953); manually curated; hypothetical protein 2004797..2005441 Clostridium clariflavum DSM 19732 11562122 YP_005046289.1 CDS Clocl_1755 NC_016627.1 2005431 2005826 D PFAM: Sporulation protein YtfJ (Spore_YtfJ); hypothetical protein 2005431..2005826 Clostridium clariflavum DSM 19732 11562123 YP_005046290.1 CDS Clocl_1756 NC_016627.1 2006068 2006463 D hypothetical protein 2006068..2006463 Clostridium clariflavum DSM 19732 11562124 YP_005046291.1 CDS Clocl_1757 NC_016627.1 2006574 2007179 D hypothetical protein 2006574..2007179 Clostridium clariflavum DSM 19732 11562125 YP_005046292.1 CDS Clocl_1758 NC_016627.1 2007313 2007666 D PFAM: Putative helix-turn-helix protein, YlxM / p13 like; manually curated; hypothetical protein 2007313..2007666 Clostridium clariflavum DSM 19732 11562126 YP_005046293.1 CDS Clocl_1759 NC_016627.1 2007771 2009123 D PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle protein; signal recognition particle protein 2007771..2009123 Clostridium clariflavum DSM 19732 11562127 YP_005046294.1 CDS Clocl_1760 NC_016627.1 2009161 2009406 D PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 2009161..2009406 Clostridium clariflavum DSM 19732 11562128 YP_005046295.1 CDS Clocl_1761 NC_016627.1 2009451 2009681 D PFAM: KH domain; putative RNA-binding protein (contains KH domain) 2009451..2009681 Clostridium clariflavum DSM 19732 11562129 YP_005046296.1 CDS Clocl_1762 NC_016627.1 2009797 2010321 D PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 2009797..2010321 Clostridium clariflavum DSM 19732 11562130 YP_005046297.1 CDS Clocl_1763 NC_016627.1 2010308 2011060 D PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N1)-methyltransferase 2010308..2011060 Clostridium clariflavum DSM 19732 11562131 YP_005046298.1 CDS Clocl_1764 NC_016627.1 2011260 2012798 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2011260..2012798 Clostridium clariflavum DSM 19732 11562132 YP_005046299.1 CDS Clocl_1765 NC_016627.1 2013208 2013786 D PFAM: Chromate transporter; chromate transport protein ChrA 2013208..2013786 Clostridium clariflavum DSM 19732 11562133 YP_005046300.1 CDS Clocl_1766 NC_016627.1 2013783 2014346 D PFAM: Chromate transporter; chromate transport protein ChrA 2013783..2014346 Clostridium clariflavum DSM 19732 11562134 YP_005046301.1 CDS Clocl_1768 NC_016627.1 2017688 2018275 D hypothetical protein 2017688..2018275 Clostridium clariflavum DSM 19732 11562136 YP_005046302.1 CDS Clocl_1769 NC_016627.1 2018970 2020367 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 2018970..2020367 Clostridium clariflavum DSM 19732 11562137 YP_005046303.1 CDS Clocl_1770 NC_016627.1 2020813 2021136 D hypothetical protein 2020813..2021136 Clostridium clariflavum DSM 19732 11562138 YP_005046304.1 CDS Clocl_1771 NC_016627.1 2021290 2022057 R PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(2021290..2022057) Clostridium clariflavum DSM 19732 11562139 YP_005046305.1 CDS Clocl_1772 NC_016627.1 2022653 2023510 D PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 2022653..2023510 Clostridium clariflavum DSM 19732 11562140 YP_005046306.1 CDS Clocl_1773 NC_016627.1 2023750 2024184 D hypothetical protein 2023750..2024184 Clostridium clariflavum DSM 19732 11562141 YP_005046307.1 CDS Clocl_1774 NC_016627.1 2024239 2024955 D hypothetical protein 2024239..2024955 Clostridium clariflavum DSM 19732 11562142 YP_005046308.1 CDS Clocl_1775 NC_016627.1 2025153 2025398 D hypothetical protein 2025153..2025398 Clostridium clariflavum DSM 19732 11562143 YP_005046309.1 CDS Clocl_1776 NC_016627.1 2025413 2025703 D PFAM: Chorismate mutase type II; chorismate mutase 2025413..2025703 Clostridium clariflavum DSM 19732 11562144 YP_005046310.1 CDS Clocl_1777 NC_016627.1 2025675 2025800 D hypothetical protein 2025675..2025800 Clostridium clariflavum DSM 19732 11562145 YP_005046311.1 CDS Clocl_1778 NC_016627.1 2026270 2038458 D PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain; chitin-binding domain-containing protein 2026270..2038458 Clostridium clariflavum DSM 19732 11562146 YP_005046312.1 CDS Clocl_1779 NC_016627.1 2038467 2039690 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; manually curated; methyl-accepting chemotaxis protein 2038467..2039690 Clostridium clariflavum DSM 19732 11562147 YP_005046313.1 CDS Clocl_1780 NC_016627.1 2039961 2040782 D PFAM: VanW like protein; putative vancomycin resistance protein 2039961..2040782 Clostridium clariflavum DSM 19732 11562148 YP_005046314.1 CDS Clocl_1781 NC_016627.1 2040816 2041616 D hypothetical protein 2040816..2041616 Clostridium clariflavum DSM 19732 11562149 YP_005046315.1 CDS Clocl_1782 NC_016627.1 2041722 2042690 D PFAM: Protein of unknown function (DUF3298); manually curated; hypothetical protein 2041722..2042690 Clostridium clariflavum DSM 19732 11562150 YP_005046316.1 CDS Clocl_1783 NC_016627.1 2042955 2044142 D PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase; manually curated; glutamyl-tRNA reductase 2042955..2044142 Clostridium clariflavum DSM 19732 11562151 YP_005046317.1 CDS Clocl_1784 NC_016627.1 2044208 2044699 D PFAM: TrkA-N domain; TIGRFAM: siroheme synthase, N-terminal domain; siroheme synthase 2044208..2044699 Clostridium clariflavum DSM 19732 11562152 YP_005046318.1 CDS Clocl_1785 NC_016627.1 2044696 2045586 D PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; hydroxymethylbilane synthase 2044696..2045586 Clostridium clariflavum DSM 19732 11562153 YP_005046319.1 CDS Clocl_1786 NC_016627.1 2045568 2047070 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrinogen-III C-methyltransferase, uroporphyrinogen-III synthase 2045568..2047070 Clostridium clariflavum DSM 19732 11562154 YP_005046320.1 CDS Clocl_1787 NC_016627.1 2047063 2048043 D PFAM: Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 2047063..2048043 Clostridium clariflavum DSM 19732 11562155 YP_005046321.1 CDS Clocl_1788 NC_016627.1 2048043 2049326 D PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 2048043..2049326 Clostridium clariflavum DSM 19732 11562156 YP_005046322.1 CDS Clocl_1789 NC_016627.1 2049411 2049773 D PFAM: CbiX; hypothetical protein 2049411..2049773 Clostridium clariflavum DSM 19732 11562157 YP_005046323.1 CDS Clocl_1790 NC_016627.1 2049795 2050820 D PFAM: chorismate binding enzyme; anthranilate/para-aminobenzoate synthase component I 2049795..2050820 Clostridium clariflavum DSM 19732 11562158 YP_005046324.1 CDS Clocl_1791 NC_016627.1 2050804 2051397 D PFAM: Aminotransferase class IV; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 2050804..2051397 Clostridium clariflavum DSM 19732 11562159 YP_005046325.1 CDS Clocl_1792 NC_016627.1 2051687 2052646 D hypothetical protein 2051687..2052646 Clostridium clariflavum DSM 19732 11562160 YP_005046326.1 CDS Clocl_1793 NC_016627.1 2053033 2054598 D PFAM: Integrase core domain; transposase 2053033..2054598 Clostridium clariflavum DSM 19732 11562161 YP_005046327.1 CDS Clocl_1794 NC_016627.1 2054576 2055334 D PFAM: IstB-like ATP binding protein; DNA replication protein 2054576..2055334 Clostridium clariflavum DSM 19732 11562162 YP_005046328.1 CDS Clocl_1795 NC_016627.1 2055585 2057189 D PFAM: Dockerin type I repeat; O-Glycosyl hydrolase family 30; O-glycosyl hydrolase 2055585..2057189 Clostridium clariflavum DSM 19732 11562163 YP_005046329.1 CDS Clocl_1796 NC_016627.1 2057676 2058548 R PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(2057676..2058548) Clostridium clariflavum DSM 19732 11562164 YP_005046330.1 CDS Clocl_1797 NC_016627.1 2059385 2060368 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; site-specific recombinase XerD 2059385..2060368 Clostridium clariflavum DSM 19732 11562165 YP_005046331.1 CDS Clocl_1798 NC_016627.1 2060484 2060747 R hypothetical protein complement(2060484..2060747) Clostridium clariflavum DSM 19732 11562166 YP_005046332.1 CDS Clocl_1799 NC_016627.1 2061114 2065067 R PFAM: Cohesin domain; Cohesin domain protein complement(2061114..2065067) Clostridium clariflavum DSM 19732 11562167 YP_005046333.1 CDS Clocl_1800 NC_016627.1 2065849 2066538 R PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; phosphopantetheine--protein transferase complement(2065849..2066538) Clostridium clariflavum DSM 19732 11562168 YP_005046334.1 CDS Clocl_1801 NC_016627.1 2066801 2068492 D hypothetical protein 2066801..2068492 Clostridium clariflavum DSM 19732 11562169 YP_005046335.1 CDS Clocl_1802 NC_016627.1 2068503 2069240 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator complement(2068503..2069240) Clostridium clariflavum DSM 19732 11562170 YP_005046336.1 CDS Clocl_1803 NC_016627.1 2069721 2071148 R PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase complement(2069721..2071148) Clostridium clariflavum DSM 19732 11562171 YP_005046337.1 CDS Clocl_1804 NC_016627.1 2071436 2072623 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(2071436..2072623) Clostridium clariflavum DSM 19732 11562172 YP_005046338.1 CDS Clocl_1805 NC_016627.1 2073129 2074064 R PFAM: Membrane dipeptidase (Peptidase family M19); Zn-dependent dipeptidase, microsomal dipeptidase complement(2073129..2074064) Clostridium clariflavum DSM 19732 11562173 YP_005046339.1 CDS Clocl_1806 NC_016627.1 2074394 2076784 R PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; dockerin-like protein complement(2074394..2076784) Clostridium clariflavum DSM 19732 11562174 YP_005046340.1 CDS Clocl_1807 NC_016627.1 2077195 2077890 R PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein radc complement(2077195..2077890) Clostridium clariflavum DSM 19732 11562175 YP_005046341.1 CDS Clocl_1808 NC_016627.1 2078006 2078389 R PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; putative endonuclease related to Holliday junction resolvase complement(2078006..2078389) Clostridium clariflavum DSM 19732 11562176 YP_005046342.1 CDS Clocl_1809 NC_016627.1 2078374 2078670 R PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein; flagellar protein FhlB-like protein complement(2078374..2078670) Clostridium clariflavum DSM 19732 11562177 YP_005046343.1 CDS Clocl_1810 NC_016627.1 2078693 2080357 R PFAM: Flagellar hook-length control protein FliK; manually curated; Flagellar hook-length control protein FliK complement(2078693..2080357) Clostridium clariflavum DSM 19732 11562178 YP_005046344.1 CDS Clocl_1811 NC_016627.1 2080649 2081674 R PFAM: Dockerin type I repeat; Glycosyl hydrolases family 16; beta-glucanase/beta-glucan synthetase complement(2080649..2081674) Clostridium clariflavum DSM 19732 11562179 YP_005046345.1 CDS Clocl_1812 NC_016627.1 2081986 2083050 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(2081986..2083050) Clostridium clariflavum DSM 19732 11562180 YP_005046346.1 CDS Clocl_1813 NC_016627.1 2083116 2083898 R PFAM: Ribonuclease HII; ribonuclease HII complement(2083116..2083898) Clostridium clariflavum DSM 19732 11562181 YP_005046347.1 CDS Clocl_1814 NC_016627.1 2083882 2084754 R PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; ribosome biogenesis GTP-binding protein YlqF complement(2083882..2084754) Clostridium clariflavum DSM 19732 11562182 YP_005046348.1 CDS Clocl_1815 NC_016627.1 2084767 2085429 R PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I complement(2084767..2085429) Clostridium clariflavum DSM 19732 11562183 YP_005046349.1 CDS Clocl_1816 NC_016627.1 2085738 2086082 R PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 complement(2085738..2086082) Clostridium clariflavum DSM 19732 11562184 YP_005046350.1 CDS Clocl_1817 NC_016627.1 2086258 2087319 R PFAM: Integrase core domain; transposase, IS30 family complement(2086258..2087319) Clostridium clariflavum DSM 19732 11562185 YP_005046351.1 CDS Clocl_1818 NC_016627.1 2087834 2088817 R manually curated; hypothetical protein complement(2087834..2088817) Clostridium clariflavum DSM 19732 11562186 YP_005046352.1 CDS Clocl_1819 NC_016627.1 2089164 2091719 R PFAM: DnaJ domain; Tetratricopeptide repeat; tetratricopeptide repeat protein,DnaJ-like protein complement(2089164..2091719) Clostridium clariflavum DSM 19732 11562187 YP_005046353.1 CDS Clocl_1820 NC_016627.1 2091721 2093421 R PFAM: Hsp70 protein; molecular chaperone complement(2091721..2093421) Clostridium clariflavum DSM 19732 11562188 YP_005046354.1 CDS Clocl_1821 NC_016627.1 2094090 2095538 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 2094090..2095538 Clostridium clariflavum DSM 19732 11562189 YP_005046355.1 CDS Clocl_1822 NC_016627.1 2095668 2096333 D hypothetical protein 2095668..2096333 Clostridium clariflavum DSM 19732 11562190 YP_005046356.1 CDS Clocl_1823 NC_016627.1 2096451 2097239 D hypothetical protein 2096451..2097239 Clostridium clariflavum DSM 19732 11562191 YP_005046357.1 CDS Clocl_1824 NC_016627.1 2097314 2099083 R PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; beta-mannanase complement(2097314..2099083) Clostridium clariflavum DSM 19732 11562192 YP_005046358.1 CDS Clocl_1825 NC_016627.1 2099342 2099860 R PFAM: RDD family; hypothetical protein complement(2099342..2099860) Clostridium clariflavum DSM 19732 11562193 YP_005046359.1 CDS Clocl_1826 NC_016627.1 2099878 2101260 R PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase complement(2099878..2101260) Clostridium clariflavum DSM 19732 11562194 YP_005046360.1 CDS Clocl_1827 NC_016627.1 2101416 2102384 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(2101416..2102384) Clostridium clariflavum DSM 19732 11562195 YP_005046361.1 CDS Clocl_1828 NC_016627.1 2102822 2103478 D PFAM: PilZ domain; PilZ domain-containing protein 2102822..2103478 Clostridium clariflavum DSM 19732 11562196 YP_005046362.1 CDS Clocl_1829 NC_016627.1 2103579 2104757 R PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; manually curated; chorismate synthase complement(2103579..2104757) Clostridium clariflavum DSM 19732 11562197 YP_005046363.1 CDS Clocl_1830 NC_016627.1 2104866 2105384 R PFAM: Shikimate kinase; shikimate kinase complement(2104866..2105384) Clostridium clariflavum DSM 19732 11562198 YP_005046364.1 CDS Clocl_1831 NC_016627.1 2105623 2106549 D PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; cell envelope-related function transcriptional attenuator common domain-containing protein 2105623..2106549 Clostridium clariflavum DSM 19732 11562199 YP_005046365.1 CDS Clocl_1832 NC_016627.1 2106650 2108104 R PFAM: Aminopeptidase I zinc metalloprotease (M18); aspartyl aminopeptidase complement(2106650..2108104) Clostridium clariflavum DSM 19732 11562200 YP_005046366.1 CDS Clocl_1833 NC_016627.1 2108363 2109862 R PFAM: Domain of unknown function (DUF3369); HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; hypothetical protein complement(2108363..2109862) Clostridium clariflavum DSM 19732 11562201 YP_005046367.1 CDS Clocl_1834 NC_016627.1 2110628 2111428 D PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; HisJ family histidinol phosphate phosphatase 2110628..2111428 Clostridium clariflavum DSM 19732 11562202 YP_005046368.1 CDS Clocl_1835 NC_016627.1 2111609 2112838 R PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(2111609..2112838) Clostridium clariflavum DSM 19732 11562203 YP_005046369.1 CDS Clocl_1836 NC_016627.1 2113312 2114391 R PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(2113312..2114391) Clostridium clariflavum DSM 19732 11562204 YP_005046370.1 CDS Clocl_1837 NC_016627.1 2114434 2114886 R PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type; FeS cluster assembly scaffold protein NifU complement(2114434..2114886) Clostridium clariflavum DSM 19732 11562205 YP_005046371.1 CDS Clocl_1838 NC_016627.1 2114888 2116069 R PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase NifS complement(2114888..2116069) Clostridium clariflavum DSM 19732 11562206 YP_005046372.1 CDS Clocl_1839 NC_016627.1 2116184 2116633 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator complement(2116184..2116633) Clostridium clariflavum DSM 19732 11562207 YP_005046373.1 CDS Clocl_1840 NC_016627.1 2116907 2117194 R PFAM: Uncharacterised protein family (UPF0180); hypothetical protein complement(2116907..2117194) Clostridium clariflavum DSM 19732 11562208 YP_005046374.1 CDS Clocl_1841 NC_016627.1 2117315 2117470 R hypothetical protein complement(2117315..2117470) Clostridium clariflavum DSM 19732 11562209 YP_005046375.1 CDS Clocl_1842 NC_016627.1 2117508 2118296 R PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; methylase of chemotaxis methyl-accepting protein complement(2117508..2118296) Clostridium clariflavum DSM 19732 11562210 YP_005046376.1 CDS Clocl_1843 NC_016627.1 2118398 2118799 R PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase complement(2118398..2118799) Clostridium clariflavum DSM 19732 11562211 YP_005046377.1 CDS Clocl_1844 NC_016627.1 2119041 2119415 R PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form; S-adenosylmethionine decarboxylase complement(2119041..2119415) Clostridium clariflavum DSM 19732 11562212 YP_005046378.1 CDS Clocl_1845 NC_016627.1 2119907 2121961 R PFAM: S1 RNA binding domain; LytB protein; TIGRFAM: ribosomal protein S1; (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase complement(2119907..2121961) Clostridium clariflavum DSM 19732 11562213 YP_005046379.1 CDS Clocl_1846 NC_016627.1 2121962 2122552 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(2121962..2122552) Clostridium clariflavum DSM 19732 11562214 YP_005046380.1 CDS Clocl_1847 NC_016627.1 2122546 2123226 R PFAM: Cytidylate kinase; Shikimate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase complement(2122546..2123226) Clostridium clariflavum DSM 19732 11562215 YP_005046381.1 CDS Clocl_1848 NC_016627.1 2123302 2123664 R PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1; monofunctional chorismate mutase, clade 1 complement(2123302..2123664) Clostridium clariflavum DSM 19732 11562216 YP_005046382.1 CDS Clocl_1849 NC_016627.1 2123695 2124237 R PFAM: HutP; HutP protein complement(2123695..2124237) Clostridium clariflavum DSM 19732 11562217 YP_005046383.1 CDS Clocl_1850 NC_016627.1 2124404 2124913 R hypothetical protein complement(2124404..2124913) Clostridium clariflavum DSM 19732 11562218 YP_005046384.1 CDS Clocl_1852 NC_016627.1 2125636 2126865 R PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; flavoprotein, HI0933 family complement(2125636..2126865) Clostridium clariflavum DSM 19732 11562220 YP_005046385.1 CDS Clocl_1853 NC_016627.1 2126979 2127608 R PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; fructose-2,6-bisphosphatase complement(2126979..2127608) Clostridium clariflavum DSM 19732 11562221 YP_005046386.1 CDS Clocl_1854 NC_016627.1 2127615 2128517 R PFAM: SIS domain; Helix-turn-helix domain, rpiR family; transcriptional regulator complement(2127615..2128517) Clostridium clariflavum DSM 19732 11562222 YP_005046387.1 CDS Clocl_1855 NC_016627.1 2128650 2128817 R hypothetical protein complement(2128650..2128817) Clostridium clariflavum DSM 19732 11562223 YP_005046388.1 CDS Clocl_1856 NC_016627.1 2129628 2130290 R PFAM: 4'-phosphopantetheinyl transferase superfamily; phosphopantetheinyl transferase complement(2129628..2130290) Clostridium clariflavum DSM 19732 11562224 YP_005046389.1 CDS Clocl_1857 NC_016627.1 2130287 2138512 R PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; polyketide synthase family protein complement(2130287..2138512) Clostridium clariflavum DSM 19732 11562225 YP_005046390.1 CDS Clocl_1858 NC_016627.1 2138817 2140319 R PFAM: AMP-binding enzyme; acyl-CoA synthetase complement(2138817..2140319) Clostridium clariflavum DSM 19732 11562226 YP_005046391.1 CDS Clocl_1859 NC_016627.1 2140480 2141520 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2140480..2141520) Clostridium clariflavum DSM 19732 11562227 YP_005046392.1 CDS Clocl_1860 NC_016627.1 2141678 2141920 R PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein complement(2141678..2141920) Clostridium clariflavum DSM 19732 11562228 YP_005046393.1 CDS Clocl_1861 NC_016627.1 2141963 2143012 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2141963..2143012) Clostridium clariflavum DSM 19732 11562229 YP_005046394.1 CDS Clocl_1862 NC_016627.1 2143471 2144478 R PFAM: Dockerin type I repeat; Rare lipoprotein A (RlpA)-like double-psi beta-barrel; manually curated; endoglucanase-like protein complement(2143471..2144478) Clostridium clariflavum DSM 19732 11562230 YP_005046395.1 CDS Clocl_1863 NC_016627.1 2144632 2147592 R PFAM: Glycosyl hydrolase family 81; Dockerin type I repeat; putative glycosyl hydrolase complement(2144632..2147592) Clostridium clariflavum DSM 19732 11562231 YP_005046396.1 CDS Clocl_1864 NC_016627.1 2147771 2150638 R PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein complement(2147771..2150638) Clostridium clariflavum DSM 19732 11562232 YP_005046397.1 CDS Clocl_1865 NC_016627.1 2151160 2152224 R PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase complement(2151160..2152224) Clostridium clariflavum DSM 19732 11562233 YP_005046398.1 CDS Clocl_1866 NC_016627.1 2152580 2153476 D PFAM: Metallo-beta-lactamase superfamily; putative hydrolase (metallo-beta-lactamase superfamily) 2152580..2153476 Clostridium clariflavum DSM 19732 11562234 YP_005046399.1 CDS Clocl_1867 NC_016627.1 2153624 2153824 R hypothetical protein complement(2153624..2153824) Clostridium clariflavum DSM 19732 11562235 YP_005046400.1 CDS Clocl_1868 NC_016627.1 2154321 2155019 D PFAM: Protein of unknown function (DUF752); hypothetical protein 2154321..2155019 Clostridium clariflavum DSM 19732 11562236 YP_005046401.1 CDS Clocl_1869 NC_016627.1 2155309 2156958 R PFAM: Dockerin type I repeat; Glycosyl hydrolases family 43; beta-xylosidase complement(2155309..2156958) Clostridium clariflavum DSM 19732 11562237 YP_005046402.1 CDS Clocl_1870 NC_016627.1 2157057 2157749 R PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; putative effector of murein hydrolase complement(2157057..2157749) Clostridium clariflavum DSM 19732 11562238 YP_005046403.1 CDS Clocl_1871 NC_016627.1 2157746 2158105 R PFAM: LrgA family; putative effector of murein hydrolase LrgA complement(2157746..2158105) Clostridium clariflavum DSM 19732 11562239 YP_005046404.1 CDS Clocl_1872 NC_016627.1 2158466 2159527 R PFAM: PPIC-type PPIASE domain; manually curated; parvulin-like peptidyl-prolyl isomerase complement(2158466..2159527) Clostridium clariflavum DSM 19732 11562240 YP_005046405.1 CDS Clocl_1873 NC_016627.1 2160091 2161671 R manually curated; hypothetical protein complement(2160091..2161671) Clostridium clariflavum DSM 19732 11562241 YP_005046406.1 CDS Clocl_1875 NC_016627.1 2163205 2163486 R hypothetical protein complement(2163205..2163486) Clostridium clariflavum DSM 19732 11562243 YP_005046407.1 CDS Clocl_1876 NC_016627.1 2163486 2163902 R hypothetical protein complement(2163486..2163902) Clostridium clariflavum DSM 19732 11562244 YP_005046408.1 CDS Clocl_1877 NC_016627.1 2163916 2164434 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(2163916..2164434) Clostridium clariflavum DSM 19732 11562245 YP_005046409.1 CDS Clocl_1878 NC_016627.1 2164532 2165473 R PFAM: alpha/beta hydrolase fold; lysophospholipase complement(2164532..2165473) Clostridium clariflavum DSM 19732 11562246 YP_005046410.1 CDS Clocl_1879 NC_016627.1 2165488 2166264 R hypothetical protein complement(2165488..2166264) Clostridium clariflavum DSM 19732 11562247 YP_005046411.1 CDS Clocl_1880 NC_016627.1 2166266 2167180 R PFAM: ABC transporter; multidrug ABC transporter ATPase complement(2166266..2167180) Clostridium clariflavum DSM 19732 11562248 YP_005046412.1 CDS Clocl_1881 NC_016627.1 2167173 2167385 R hypothetical protein complement(2167173..2167385) Clostridium clariflavum DSM 19732 11562249 YP_005046413.1 CDS Clocl_1882 NC_016627.1 2167964 2168695 R hypothetical protein complement(2167964..2168695) Clostridium clariflavum DSM 19732 11562250 YP_005046414.1 CDS Clocl_1883 NC_016627.1 2168692 2169252 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(2168692..2169252) Clostridium clariflavum DSM 19732 11562251 YP_005046415.1 CDS Clocl_1886 NC_016627.1 2170673 2170906 D hypothetical protein 2170673..2170906 Clostridium clariflavum DSM 19732 11562254 YP_005046416.1 CDS Clocl_1887 NC_016627.1 2171014 2172945 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase complement(2171014..2172945) Clostridium clariflavum DSM 19732 11562255 YP_005046417.1 CDS Clocl_1888 NC_016627.1 2173202 2175142 R PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; putative oligopeptide transporter, OPT family complement(2173202..2175142) Clostridium clariflavum DSM 19732 11562256 YP_005046418.1 CDS Clocl_1889 NC_016627.1 2175161 2176591 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase complement(2175161..2176591) Clostridium clariflavum DSM 19732 11562257 YP_005046419.1 CDS Clocl_1890 NC_016627.1 2176873 2177703 R PFAM: Trypsin; trypsin-like serine protease with C-terminal PDZ domain complement(2176873..2177703) Clostridium clariflavum DSM 19732 11562258 YP_005046420.1 CDS Clocl_1891 NC_016627.1 2177896 2178624 R PFAM: Protein of unknown function (DUF554); membrane protein complement(2177896..2178624) Clostridium clariflavum DSM 19732 11562259 YP_005046421.1 CDS Clocl_1892 NC_016627.1 2178858 2180306 R PFAM: Beta-eliminating lyase; tryptophanase complement(2178858..2180306) Clostridium clariflavum DSM 19732 11562260 YP_005046422.1 CDS Clocl_1893 NC_016627.1 2180722 2181720 R PFAM: Dockerin type I repeat; GDSL-like Lipase/Acylhydrolase; lysophospholipase L1-like esterase complement(2180722..2181720) Clostridium clariflavum DSM 19732 11562261 YP_005046423.1 CDS Clocl_1894 NC_016627.1 2181863 2182597 R hypothetical protein complement(2181863..2182597) Clostridium clariflavum DSM 19732 11562262 YP_005046424.1 CDS Clocl_1895 NC_016627.1 2182826 2183224 D PFAM: Penicillinase repressor; putative transcriptional regulator 2182826..2183224 Clostridium clariflavum DSM 19732 11562263 YP_005046425.1 CDS Clocl_1896 NC_016627.1 2183217 2186084 D PFAM: BlaR1 peptidase M56; manually curated; antirepressor regulating drug resistance protein 2183217..2186084 Clostridium clariflavum DSM 19732 11562264 YP_005046426.1 CDS Clocl_1897 NC_016627.1 2186056 2186634 D hypothetical protein 2186056..2186634 Clostridium clariflavum DSM 19732 11562265 YP_005046427.1 CDS Clocl_1898 NC_016627.1 2186798 2187862 R PFAM: Bacterial extracellular solute-binding protein; spermidine/putrescine-binding periplasmic protein complement(2186798..2187862) Clostridium clariflavum DSM 19732 11562266 YP_005046428.1 CDS Clocl_1899 NC_016627.1 2187859 2188653 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type spermidine/putrescine transport system, permease component II complement(2187859..2188653) Clostridium clariflavum DSM 19732 11562267 YP_005046429.1 CDS Clocl_1900 NC_016627.1 2188647 2189474 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type spermidine/putrescine transport system, permease component I complement(2188647..2189474) Clostridium clariflavum DSM 19732 11562268 YP_005046430.1 CDS Clocl_1901 NC_016627.1 2189471 2190529 R PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; spermidine/putrescine ABC transporter ATP-binding subunit complement(2189471..2190529) Clostridium clariflavum DSM 19732 11562269 YP_005046431.1 CDS Clocl_1902 NC_016627.1 2190539 2191078 R PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator with cupin domain complement(2190539..2191078) Clostridium clariflavum DSM 19732 11562270 YP_005046432.1 CDS Clocl_1903 NC_016627.1 2191529 2195884 R PFAM: DNA polymerase III polC-type N-terminus; Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha chain, Gram-positive type; DNA polymerase III subunit alpha complement(2191529..2195884) Clostridium clariflavum DSM 19732 11562271 YP_005046433.1 CDS Clocl_1905 NC_016627.1 2197701 2198924 R hypothetical protein complement(2197701..2198924) Clostridium clariflavum DSM 19732 11562273 YP_005046434.1 CDS Clocl_1908 NC_016627.1 2200267 2201787 R PFAM: Phage integrase family; site-specific recombinase XerD complement(2200267..2201787) Clostridium clariflavum DSM 19732 11562276 YP_005046435.1 CDS Clocl_1909 NC_016627.1 2201898 2202107 R TIGRFAM: DNA binding domain, excisionase family; hypothetical protein complement(2201898..2202107) Clostridium clariflavum DSM 19732 11562277 YP_005046436.1 CDS Clocl_1910 NC_016627.1 2202161 2203276 D PFAM: DNA methylase; DNA modification methylase 2202161..2203276 Clostridium clariflavum DSM 19732 11562278 YP_005046437.1 CDS Clocl_1911 NC_016627.1 2203447 2203827 R PFAM: Helix-turn-helix; putative transcriptional regulator complement(2203447..2203827) Clostridium clariflavum DSM 19732 11562328 YP_005046438.1 CDS Clocl_1912 NC_016627.1 2204669 2207644 R PFAM: Type III restriction enzyme, res subunit; restriction endonuclease complement(2204669..2207644) Clostridium clariflavum DSM 19732 11562329 YP_005046439.1 CDS Clocl_1913 NC_016627.1 2207661 2209544 R PFAM: DNA methylase; adenine specific DNA methylase Mod complement(2207661..2209544) Clostridium clariflavum DSM 19732 11562330 YP_005046440.1 CDS Clocl_1914 NC_016627.1 2209541 2210266 R hypothetical protein complement(2209541..2210266) Clostridium clariflavum DSM 19732 11562331 YP_005046441.1 CDS Clocl_1915 NC_016627.1 2210278 2213547 R PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; DNA/RNA helicase complement(2210278..2213547) Clostridium clariflavum DSM 19732 11562332 YP_005046442.1 CDS Clocl_1916 NC_016627.1 2213552 2213767 R hypothetical protein complement(2213552..2213767) Clostridium clariflavum DSM 19732 11562333 YP_005046443.1 CDS Clocl_1917 NC_016627.1 2214208 2214804 D PFAM: Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 2214208..2214804 Clostridium clariflavum DSM 19732 11562334 YP_005046444.1 CDS Clocl_1918 NC_016627.1 2214841 2215296 D hypothetical protein 2214841..2215296 Clostridium clariflavum DSM 19732 11562335 YP_005046445.1 CDS Clocl_1919 NC_016627.1 2215300 2215743 D hypothetical protein 2215300..2215743 Clostridium clariflavum DSM 19732 11562336 YP_005046446.1 CDS Clocl_1920 NC_016627.1 2215921 2216166 R hypothetical protein complement(2215921..2216166) Clostridium clariflavum DSM 19732 11562337 YP_005046447.1 CDS Clocl_1921 NC_016627.1 2216576 2217205 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(2216576..2217205) Clostridium clariflavum DSM 19732 11562338 YP_005046448.1 CDS Clocl_1922 NC_016627.1 2217470 2218369 R PFAM: Integrase core domain; transposase complement(2217470..2218369) Clostridium clariflavum DSM 19732 11562339 YP_005046449.1 CDS Clocl_1923 NC_016627.1 2218329 2218622 R PFAM: Transposase; transposase complement(2218329..2218622) Clostridium clariflavum DSM 19732 11562340 YP_005046450.1 CDS Clocl_1924 NC_016627.1 2218748 2219086 D hypothetical protein 2218748..2219086 Clostridium clariflavum DSM 19732 11562341 YP_005046451.1 CDS Clocl_1925 NC_016627.1 2219286 2219438 D hypothetical protein 2219286..2219438 Clostridium clariflavum DSM 19732 11562342 YP_005046452.1 CDS Clocl_1926 NC_016627.1 2219587 2220711 D PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta 2219587..2220711 Clostridium clariflavum DSM 19732 11562343 YP_005046453.1 CDS Clocl_1927 NC_016627.1 2220725 2220871 D PFAM: Oxaloacetate decarboxylase, gamma chain; Oxaloacetate decarboxylase, gamma chain 2220725..2220871 Clostridium clariflavum DSM 19732 11562344 YP_005046454.1 CDS Clocl_1928 NC_016627.1 2221182 2221817 D PFAM: Exonuclease; manually curated; inhibitor of the KinA pathway to sporulation, predicted exonuclease 2221182..2221817 Clostridium clariflavum DSM 19732 11562345 YP_005046455.1 CDS Clocl_1929 NC_016627.1 2221911 2222645 R PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase 1-activating enzyme complement(2221911..2222645) Clostridium clariflavum DSM 19732 11562346 YP_005046456.1 CDS Clocl_1930 NC_016627.1 2222664 2224892 R PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 complement(2222664..2224892) Clostridium clariflavum DSM 19732 11562347 YP_005046457.1 CDS Clocl_1931 NC_016627.1 2225098 2225952 R hypothetical protein complement(2225098..2225952) Clostridium clariflavum DSM 19732 11562348 YP_005046458.1 CDS Clocl_1932 NC_016627.1 2226183 2226437 R hypothetical protein complement(2226183..2226437) Clostridium clariflavum DSM 19732 11562349 YP_005046459.1 CDS Clocl_1933 NC_016627.1 2226492 2227091 R hypothetical protein complement(2226492..2227091) Clostridium clariflavum DSM 19732 11562350 YP_005046460.1 CDS Clocl_1934 NC_016627.1 2227129 2227437 R manually curated; hypothetical protein complement(2227129..2227437) Clostridium clariflavum DSM 19732 11562351 YP_005046461.1 CDS Clocl_1935 NC_016627.1 2227513 2229138 R PFAM: Protein of unknown function (DUF342); manually curated; putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon complement(2227513..2229138) Clostridium clariflavum DSM 19732 11562352 YP_005046462.1 CDS Clocl_1936 NC_016627.1 2229285 2230055 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG complement(2229285..2230055) Clostridium clariflavum DSM 19732 11562353 YP_005046463.1 CDS Clocl_1937 NC_016627.1 2230198 2230605 R hypothetical protein complement(2230198..2230605) Clostridium clariflavum DSM 19732 11562354 YP_005046464.1 CDS Clocl_1938 NC_016627.1 2230771 2231256 R PFAM: CheD; chemotaxis protein complement(2230771..2231256) Clostridium clariflavum DSM 19732 11562355 YP_005046465.1 CDS Clocl_1939 NC_016627.1 2231256 2231909 R PFAM: CheC-like family; chemotaxis protein CheC, inhibitor of MCP methylation complement(2231256..2231909) Clostridium clariflavum DSM 19732 11562356 YP_005046466.1 CDS Clocl_1940 NC_016627.1 2231936 2232382 R PFAM: CheW-like domain; chemotaxis signal transduction protein complement(2231936..2232382) Clostridium clariflavum DSM 19732 11562357 YP_005046467.1 CDS Clocl_1941 NC_016627.1 2232409 2234484 R PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; chemotaxis protein histidine kinase-like protein complement(2232409..2234484) Clostridium clariflavum DSM 19732 11562358 YP_005046468.1 CDS Clocl_1942 NC_016627.1 2234475 2235548 R PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain complement(2234475..2235548) Clostridium clariflavum DSM 19732 11562359 YP_005046469.1 CDS Clocl_1943 NC_016627.1 2235558 2236223 R PFAM: PilZ domain; putative glycosyltransferase complement(2235558..2236223) Clostridium clariflavum DSM 19732 11562360 YP_005046470.1 CDS Clocl_1944 NC_016627.1 2236274 2237185 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase complement(2236274..2237185) Clostridium clariflavum DSM 19732 11562361 YP_005046471.1 CDS Clocl_1945 NC_016627.1 2237185 2238369 R PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthetic protein FlhF complement(2237185..2238369) Clostridium clariflavum DSM 19732 11562362 YP_005046472.1 CDS Clocl_1946 NC_016627.1 2238371 2240395 R PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA complement(2238371..2240395) Clostridium clariflavum DSM 19732 11562363 YP_005046473.1 CDS Clocl_1947 NC_016627.1 2240501 2241700 R PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: type III secretion protein, YscU/HrpY family; flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB complement(2240501..2241700) Clostridium clariflavum DSM 19732 11562364 YP_005046474.1 CDS Clocl_1948 NC_016627.1 2241697 2242482 R PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR complement(2241697..2242482) Clostridium clariflavum DSM 19732 11562365 YP_005046475.1 CDS Clocl_1949 NC_016627.1 2242510 2242779 R PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ complement(2242510..2242779) Clostridium clariflavum DSM 19732 11562366 YP_005046476.1 CDS Clocl_1950 NC_016627.1 2242822 2243628 R PFAM: FliP family; TIGRFAM: type III secretion apparatus protein, YscR/HrcR family; flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP complement(2242822..2243628) Clostridium clariflavum DSM 19732 11562367 YP_005046477.1 CDS Clocl_1951 NC_016627.1 2243585 2244091 R PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biogenesis protein complement(2243585..2244091) Clostridium clariflavum DSM 19732 11562368 YP_005046478.1 CDS Clocl_1952 NC_016627.1 2244176 2244538 R PFAM: Response regulator receiver domain; response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains complement(2244176..2244538) Clostridium clariflavum DSM 19732 11562369 YP_005046479.1 CDS Clocl_1953 NC_016627.1 2244618 2245787 R PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN; manually curated; flagellar motor switch protein FliN complement(2244618..2245787) Clostridium clariflavum DSM 19732 11562370 YP_005046480.1 CDS Clocl_1954 NC_016627.1 2245789 2246778 R PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; manually curated; flagellar motor switch protein FliM complement(2245789..2246778) Clostridium clariflavum DSM 19732 11562371 YP_005046481.1 CDS Clocl_1955 NC_016627.1 2246791 2247297 R PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein complement(2246791..2247297) Clostridium clariflavum DSM 19732 11562372 YP_005046482.1 CDS Clocl_1956 NC_016627.1 2247613 2247813 R PFAM: Flagellar protein (FlbD); motility protein complement(2247613..2247813) Clostridium clariflavum DSM 19732 11562373 YP_005046483.1 CDS Clocl_1957 NC_016627.1 2248167 2249486 R PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook-basal body protein complement(2248167..2249486) Clostridium clariflavum DSM 19732 11562374 YP_005046484.1 CDS Clocl_1958 NC_016627.1 2249599 2249991 R PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein; flagellar operon protein complement(2249599..2249991) Clostridium clariflavum DSM 19732 11562375 YP_005046485.1 CDS Clocl_1959 NC_016627.1 2250025 2250918 R PFAM: Flagellar hook capping protein; flagellar hook capping protein complement(2250025..2250918) Clostridium clariflavum DSM 19732 11562376 YP_005046486.1 CDS Clocl_1960 NC_016627.1 2250970 2252538 R PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein complement(2250970..2252538) Clostridium clariflavum DSM 19732 11562377 YP_005046487.1 CDS Clocl_1961 NC_016627.1 2252954 2254243 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 2252954..2254243 Clostridium clariflavum DSM 19732 11562378 YP_005046488.1 CDS Clocl_1962 NC_016627.1 2254467 2255183 R manually curated; hypothetical protein complement(2254467..2255183) Clostridium clariflavum DSM 19732 11562379 YP_005046489.1 CDS Clocl_1963 NC_016627.1 2255415 2255858 R PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar export protein FliJ complement(2255415..2255858) Clostridium clariflavum DSM 19732 11562380 YP_005046490.1 CDS Clocl_1964 NC_016627.1 2255947 2257266 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; flagellar protein export ATPase FliI; type III secretion system ATPase, FliI/YscN complement(2255947..2257266) Clostridium clariflavum DSM 19732 11562381 YP_005046491.1 CDS Clocl_1965 NC_016627.1 2257442 2258242 R PFAM: Flagellar assembly protein FliH; flagellar biosynthesis/type III secretory pathway protein complement(2257442..2258242) Clostridium clariflavum DSM 19732 11562382 YP_005046492.1 CDS Clocl_1966 NC_016627.1 2258235 2259260 R PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(2258235..2259260) Clostridium clariflavum DSM 19732 11562383 YP_005046493.1 CDS Clocl_1967 NC_016627.1 2259299 2260867 R PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF complement(2259299..2260867) Clostridium clariflavum DSM 19732 11562384 YP_005046494.1 CDS Clocl_1968 NC_016627.1 2260965 2261273 R PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE complement(2260965..2261273) Clostridium clariflavum DSM 19732 11562385 YP_005046495.1 CDS Clocl_1969 NC_016627.1 2261321 2261761 R PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(2261321..2261761) Clostridium clariflavum DSM 19732 11562386 YP_005046496.1 CDS Clocl_1970 NC_016627.1 2261768 2262256 R TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(2261768..2262256) Clostridium clariflavum DSM 19732 11562387 YP_005046497.1 CDS Clocl_1971 NC_016627.1 2263040 2264350 R PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase; tRNA:m(5)U-54 methyltransferase complement(2263040..2264350) Clostridium clariflavum DSM 19732 11562388 YP_005046498.1 CDS Clocl_1972 NC_016627.1 2264369 2266465 R PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I, bacterial complement(2264369..2266465) Clostridium clariflavum DSM 19732 11562389 YP_005046499.1 CDS Clocl_1973 NC_016627.1 2266731 2267840 R PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; manually curated; DNA protecting protein DprA complement(2266731..2267840) Clostridium clariflavum DSM 19732 11562390 YP_005046500.1 CDS Clocl_1974 NC_016627.1 2268195 2269721 D PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; Mg chelatase-like protein 2268195..2269721 Clostridium clariflavum DSM 19732 11562391 YP_005046501.1 CDS Clocl_1975 NC_016627.1 2269782 2271458 R PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; dockerin-like protein complement(2269782..2271458) Clostridium clariflavum DSM 19732 11562392 YP_005046502.1 CDS Clocl_1976 NC_016627.1 2271856 2272248 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; cytidine deaminase 2271856..2272248 Clostridium clariflavum DSM 19732 11562393 YP_005046503.1 CDS Clocl_1977 NC_016627.1 2272597 2272923 D hypothetical protein 2272597..2272923 Clostridium clariflavum DSM 19732 11562394 YP_005046504.1 CDS Clocl_1978 NC_016627.1 2273076 2274050 R PFAM: Cohesin domain; Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(2273076..2274050) Clostridium clariflavum DSM 19732 11562395 YP_005046505.1 CDS Clocl_1979 NC_016627.1 2274223 2274945 R PFAM: Thioesterase domain; putative thioesterase involved in non-ribosomal peptide biosynthesis complement(2274223..2274945) Clostridium clariflavum DSM 19732 11562396 YP_005046506.1 CDS Clocl_1980 NC_016627.1 2274958 2276880 R PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily complement(2274958..2276880) Clostridium clariflavum DSM 19732 11562397 YP_005046507.1 CDS Clocl_1981 NC_016627.1 2277589 2279274 D PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; endoglucanase 2277589..2279274 Clostridium clariflavum DSM 19732 11562398 YP_005046508.1 CDS Clocl_1982 NC_016627.1 2279336 2279830 R hypothetical protein complement(2279336..2279830) Clostridium clariflavum DSM 19732 11562399 YP_005046509.1 CDS Clocl_1983 NC_016627.1 2279935 2280192 R hypothetical protein complement(2279935..2280192) Clostridium clariflavum DSM 19732 11562400 YP_005046510.1 CDS Clocl_1985 NC_016627.1 2281100 2282716 R PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; NhaP-type Na+(K+)/H+ antiporter complement(2281100..2282716) Clostridium clariflavum DSM 19732 11562402 YP_005046511.1 CDS Clocl_1988 NC_016627.1 2283553 2284347 R hypothetical protein complement(2283553..2284347) Clostridium clariflavum DSM 19732 11562405 YP_005046512.1 CDS Clocl_1989 NC_016627.1 2284526 2285170 R hypothetical protein complement(2284526..2285170) Clostridium clariflavum DSM 19732 11562406 YP_005046513.1 CDS Clocl_1990 NC_016627.1 2285288 2285893 R PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1; fructose-2,6-bisphosphatase complement(2285288..2285893) Clostridium clariflavum DSM 19732 11562407 YP_005046514.1 CDS Clocl_1991 NC_016627.1 2285970 2286740 R hypothetical protein complement(2285970..2286740) Clostridium clariflavum DSM 19732 11562408 YP_005046515.1 CDS Clocl_1992 NC_016627.1 2286818 2287009 R hypothetical protein complement(2286818..2287009) Clostridium clariflavum DSM 19732 11562409 YP_005046516.1 CDS Clocl_1993 NC_016627.1 2287353 2287835 R PFAM: Domain of unknown function (DUF1877); hypothetical protein complement(2287353..2287835) Clostridium clariflavum DSM 19732 11562410 YP_005046517.1 CDS Clocl_1994 NC_016627.1 2287897 2288025 R hypothetical protein complement(2287897..2288025) Clostridium clariflavum DSM 19732 11562411 YP_005046518.1 CDS Clocl_1995 NC_016627.1 2287997 2288248 R hypothetical protein complement(2287997..2288248) Clostridium clariflavum DSM 19732 11562412 YP_005046519.1 CDS Clocl_1996 NC_016627.1 2288383 2289237 R hypothetical protein complement(2288383..2289237) Clostridium clariflavum DSM 19732 11562413 YP_005046520.1 CDS Clocl_1997 NC_016627.1 2289307 2289627 R hypothetical protein complement(2289307..2289627) Clostridium clariflavum DSM 19732 11562414 YP_005046521.1 CDS Clocl_1998 NC_016627.1 2289933 2290616 R PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(2289933..2290616) Clostridium clariflavum DSM 19732 11562415 YP_005046522.1 CDS Clocl_1999 NC_016627.1 2290613 2292703 R PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase class III catalytic subunit complement(2290613..2292703) Clostridium clariflavum DSM 19732 11562416 YP_005046523.1 CDS Clocl_2000 NC_016627.1 2293571 2293696 R hypothetical protein complement(2293571..2293696) Clostridium clariflavum DSM 19732 11562417 YP_005046524.1 CDS Clocl_2001 NC_016627.1 2293969 2294721 R hypothetical protein complement(2293969..2294721) Clostridium clariflavum DSM 19732 11562418 YP_005046525.1 CDS Clocl_2002 NC_016627.1 2294765 2295205 R hypothetical protein complement(2294765..2295205) Clostridium clariflavum DSM 19732 11562419 YP_005046526.1 CDS Clocl_2003 NC_016627.1 2295567 2295752 R hypothetical protein complement(2295567..2295752) Clostridium clariflavum DSM 19732 11562420 YP_005046527.1 CDS Clocl_2004 NC_016627.1 2295844 2298252 R PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain; Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme complement(2295844..2298252) Clostridium clariflavum DSM 19732 11562421 YP_005046528.1 CDS Clocl_2005 NC_016627.1 2298253 2298888 R PFAM: Vitamin B12 dependent methionine synthase, activation domain; vitamin B12 dependent methionine synthase complement(2298253..2298888) Clostridium clariflavum DSM 19732 11562422 YP_005046529.1 CDS Clocl_2006 NC_016627.1 2299165 2299350 D hypothetical protein 2299165..2299350 Clostridium clariflavum DSM 19732 11562423 YP_005046530.1 CDS Clocl_2007 NC_016627.1 2299364 2299612 D PFAM: Coat F domain; coat F domain-containing protein 2299364..2299612 Clostridium clariflavum DSM 19732 11562424 YP_005046531.1 CDS Clocl_2008 NC_016627.1 2299785 2299961 R hypothetical protein complement(2299785..2299961) Clostridium clariflavum DSM 19732 11562425 YP_005046532.1 CDS Clocl_2009 NC_016627.1 2299979 2300620 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family; sporulation protein, yteA family complement(2299979..2300620) Clostridium clariflavum DSM 19732 11562426 YP_005046533.1 CDS Clocl_2010 NC_016627.1 2300820 2301602 D PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; methylthioadenosine phosphorylase 2300820..2301602 Clostridium clariflavum DSM 19732 11562427 YP_005046534.1 CDS Clocl_2011 NC_016627.1 2301662 2302696 D PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; methylthioribose-1-phosphate isomerase 2301662..2302696 Clostridium clariflavum DSM 19732 11562428 YP_005046535.1 CDS Clocl_2012 NC_016627.1 2302849 2303931 R PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(2302849..2303931) Clostridium clariflavum DSM 19732 11562429 YP_005046536.1 CDS Clocl_2013 NC_016627.1 2303941 2304447 R PFAM: DivIVA protein; TIGRFAM: DivIVA domain; DivIVA domain-containing protein complement(2303941..2304447) Clostridium clariflavum DSM 19732 11562430 YP_005046537.1 CDS Clocl_2014 NC_016627.1 2304463 2305254 R PFAM: S4 domain; hypothetical protein complement(2304463..2305254) Clostridium clariflavum DSM 19732 11562431 YP_005046538.1 CDS Clocl_2015 NC_016627.1 2305324 2305605 R PFAM: YGGT family; hypothetical protein complement(2305324..2305605) Clostridium clariflavum DSM 19732 11562432 YP_005046539.1 CDS Clocl_2016 NC_016627.1 2305618 2306076 R PFAM: Protein of unknown function (DUF552); manually curated; hypothetical protein complement(2305618..2306076) Clostridium clariflavum DSM 19732 11562433 YP_005046540.1 CDS Clocl_2017 NC_016627.1 2306113 2306820 R PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate enzyme, YggS family complement(2306113..2306820) Clostridium clariflavum DSM 19732 11562434 YP_005046541.1 CDS Clocl_2018 NC_016627.1 2306820 2308109 R TIGRFAM: putative membrane fusion protein; hypothetical protein complement(2306820..2308109) Clostridium clariflavum DSM 19732 11562435 YP_005046542.1 CDS Clocl_2019 NC_016627.1 2308175 2309461 R PFAM: Aluminium resistance protein; cystathionine beta-lyase family protein involved in aluminum resistance complement(2308175..2309461) Clostridium clariflavum DSM 19732 11562436 YP_005046543.1 CDS Clocl_2020 NC_016627.1 2309685 2311397 R PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain; glycosidase complement(2309685..2311397) Clostridium clariflavum DSM 19732 11562437 YP_005046544.1 CDS Clocl_2021 NC_016627.1 2311609 2312622 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase 2311609..2312622 Clostridium clariflavum DSM 19732 11562438 YP_005046545.1 CDS Clocl_2022 NC_016627.1 2312766 2313347 D PFAM: MerR family regulatory protein; putative transcriptional regulator 2312766..2313347 Clostridium clariflavum DSM 19732 11562439 YP_005046546.1 CDS Clocl_2023 NC_016627.1 2313574 2314200 R hypothetical protein complement(2313574..2314200) Clostridium clariflavum DSM 19732 11562440 YP_005046547.1 CDS Clocl_2025 NC_016627.1 2315416 2315802 R PFAM: Penicillinase repressor; putative transcriptional regulator complement(2315416..2315802) Clostridium clariflavum DSM 19732 11562442 YP_005046548.1 CDS Clocl_2026 NC_016627.1 2316175 2316570 R PFAM: Response regulator receiver domain; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(2316175..2316570) Clostridium clariflavum DSM 19732 11562443 YP_005046549.1 CDS Clocl_2027 NC_016627.1 2316572 2319640 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain S-box complement(2316572..2319640) Clostridium clariflavum DSM 19732 11562444 YP_005046550.1 CDS Clocl_2028 NC_016627.1 2319663 2320703 R PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain complement(2319663..2320703) Clostridium clariflavum DSM 19732 11562445 YP_005046551.1 CDS Clocl_2029 NC_016627.1 2320709 2321539 R PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; methylase of chemotaxis methyl-accepting protein complement(2320709..2321539) Clostridium clariflavum DSM 19732 11562446 YP_005046552.1 CDS Clocl_2030 NC_016627.1 2321635 2322132 R PFAM: CheW-like domain; chemotaxis signal transduction protein complement(2321635..2322132) Clostridium clariflavum DSM 19732 11562447 YP_005046553.1 CDS Clocl_2031 NC_016627.1 2322244 2324388 R PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; chemotaxis protein histidine kinase-like protein complement(2322244..2324388) Clostridium clariflavum DSM 19732 11562448 YP_005046554.1 CDS Clocl_2032 NC_016627.1 2324455 2324808 R PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain complement(2324455..2324808) Clostridium clariflavum DSM 19732 11562449 YP_005046555.1 CDS Clocl_2033 NC_016627.1 2325352 2326218 R PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A; sporulation transcription factor Spo0A complement(2325352..2326218) Clostridium clariflavum DSM 19732 11562450 YP_005046556.1 CDS Clocl_2034 NC_016627.1 2326458 2327777 R PFAM: SpoIVB peptidase S55; PDZ domain (Also known as DHR or GLGF); TIGRFAM: stage IV sporulation protein B; manually curated; stage IV sporulation protein B complement(2326458..2327777) Clostridium clariflavum DSM 19732 11562451 YP_005046557.1 CDS Clocl_2035 NC_016627.1 2328178 2329905 R PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA replication and repair protein RecN complement(2328178..2329905) Clostridium clariflavum DSM 19732 11562452 YP_005046558.1 CDS Clocl_2036 NC_016627.1 2329933 2330400 R PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor; ArgR family transcriptional regulator complement(2329933..2330400) Clostridium clariflavum DSM 19732 11562453 YP_005046559.1 CDS Clocl_2037 NC_016627.1 2330402 2331271 R PFAM: ATP-NAD kinase; putative sugar kinase complement(2330402..2331271) Clostridium clariflavum DSM 19732 11562454 YP_005046560.1 CDS Clocl_2038 NC_016627.1 2331444 2331908 R hypothetical protein complement(2331444..2331908) Clostridium clariflavum DSM 19732 11562455 YP_005046561.1 CDS Clocl_2039 NC_016627.1 2331926 2332717 R PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein complement(2331926..2332717) Clostridium clariflavum DSM 19732 11562456 YP_005046562.1 CDS Clocl_2040 NC_016627.1 2333010 2334899 R PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase complement(2333010..2334899) Clostridium clariflavum DSM 19732 11562457 YP_005046563.1 CDS Clocl_2041 NC_016627.1 2335324 2335479 D hypothetical protein 2335324..2335479 Clostridium clariflavum DSM 19732 11562458 YP_005046564.1 CDS Clocl_2042 NC_016627.1 2335929 2338175 D PFAM: Copper amine oxidase N-terminal domain; D-alanyl-D-alanine carboxypeptidase; L,D-transpeptidase catalytic domain; D-alanyl-D-alanine carboxypeptidase 2335929..2338175 Clostridium clariflavum DSM 19732 11562459 YP_005046565.1 CDS Clocl_2043 NC_016627.1 2338300 2339757 R manually curated; hypothetical protein complement(2338300..2339757) Clostridium clariflavum DSM 19732 11562460 YP_005046566.1 CDS Clocl_2044 NC_016627.1 2339844 2341037 R hypothetical protein complement(2339844..2341037) Clostridium clariflavum DSM 19732 11562461 YP_005046567.1 CDS Clocl_2045 NC_016627.1 2341056 2341793 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor complement(2341056..2341793) Clostridium clariflavum DSM 19732 11562462 YP_005046568.1 CDS Clocl_2046 NC_016627.1 2342112 2344571 R PFAM: Regulator of chromosome condensation (RCC1) repeat; Dockerin type I repeat; RCC1 domain-containing protein, alpha-tubulin suppressor complement(2342112..2344571) Clostridium clariflavum DSM 19732 11562463 YP_005046569.1 CDS Clocl_2047 NC_016627.1 2345161 2345283 R hypothetical protein complement(2345161..2345283) Clostridium clariflavum DSM 19732 11562464 YP_005046570.1 CDS Clocl_2048 NC_016627.1 2345516 2345755 D hypothetical protein 2345516..2345755 Clostridium clariflavum DSM 19732 11562465 YP_005046571.1 CDS Clocl_2049 NC_016627.1 2345895 2348459 R PFAM: Predicted permease; lipoprotein release ABC transporter permease complement(2345895..2348459) Clostridium clariflavum DSM 19732 11562466 YP_005046572.1 CDS Clocl_2050 NC_016627.1 2348456 2349139 R PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase complement(2348456..2349139) Clostridium clariflavum DSM 19732 11562467 YP_005046573.1 CDS Clocl_2051 NC_016627.1 2349318 2350280 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(2349318..2350280) Clostridium clariflavum DSM 19732 11562468 YP_005046574.1 CDS Clocl_2052 NC_016627.1 2350321 2351016 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(2350321..2351016) Clostridium clariflavum DSM 19732 11562469 YP_005046575.1 CDS Clocl_2054 NC_016627.1 2351575 2352285 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2351575..2352285 Clostridium clariflavum DSM 19732 11562471 YP_005046576.1 CDS Clocl_2055 NC_016627.1 2352293 2354056 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; signal transduction histidine kinase 2352293..2354056 Clostridium clariflavum DSM 19732 11562472 YP_005046577.1 CDS Clocl_2056 NC_016627.1 2354398 2355930 D hypothetical protein 2354398..2355930 Clostridium clariflavum DSM 19732 11562473 YP_005046578.1 CDS Clocl_2057 NC_016627.1 2356470 2357279 R PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein; hemolysin A complement(2356470..2357279) Clostridium clariflavum DSM 19732 11562474 YP_005046579.1 CDS Clocl_2058 NC_016627.1 2357322 2359205 R PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase complement(2357322..2359205) Clostridium clariflavum DSM 19732 11562475 YP_005046580.1 CDS Clocl_2059 NC_016627.1 2359218 2359856 R hypothetical protein complement(2359218..2359856) Clostridium clariflavum DSM 19732 11562476 YP_005046581.1 CDS Clocl_2060 NC_016627.1 2360836 2361276 R PFAM: Divergent PAP2 family; hypothetical protein complement(2360836..2361276) Clostridium clariflavum DSM 19732 11562477 YP_005046582.1 CDS Clocl_2061 NC_016627.1 2361306 2362196 R PFAM: Polyprenyl synthetase; geranylgeranyl pyrophosphate synthase complement(2361306..2362196) Clostridium clariflavum DSM 19732 11562478 YP_005046583.1 CDS Clocl_2062 NC_016627.1 2362225 2362455 R PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; Exodeoxyribonuclease VII small subunit complement(2362225..2362455) Clostridium clariflavum DSM 19732 11562479 YP_005046584.1 CDS Clocl_2063 NC_016627.1 2362458 2363741 R PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII large subunit complement(2362458..2363741) Clostridium clariflavum DSM 19732 11562480 YP_005046585.1 CDS Clocl_2064 NC_016627.1 2363778 2364212 R PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription antitermination factor NusB complement(2363778..2364212) Clostridium clariflavum DSM 19732 11562481 YP_005046586.1 CDS Clocl_2065 NC_016627.1 2364418 2364648 R PFAM: Small integral membrane protein (DUF2273); integral membrane protein complement(2364418..2364648) Clostridium clariflavum DSM 19732 11562482 YP_005046587.1 CDS Clocl_2066 NC_016627.1 2364660 2365208 R PFAM: Protein of unknown function (DUF322); hypothetical protein complement(2364660..2365208) Clostridium clariflavum DSM 19732 11562483 YP_005046588.1 CDS Clocl_2067 NC_016627.1 2365450 2365854 R PFAM: Protein of unknown function (DUF322); hypothetical protein complement(2365450..2365854) Clostridium clariflavum DSM 19732 11562484 YP_005046589.1 CDS Clocl_2068 NC_016627.1 2366002 2366679 R manually curated; hypothetical protein complement(2366002..2366679) Clostridium clariflavum DSM 19732 11562485 YP_005046590.1 CDS Clocl_2069 NC_016627.1 2366782 2367414 R TIGRFAM: stage III sporulation protein AG; hypothetical protein complement(2366782..2367414) Clostridium clariflavum DSM 19732 11562486 YP_005046591.1 CDS Clocl_2070 NC_016627.1 2367450 2368085 R PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF; manually curated; stage III sporulation protein AF complement(2367450..2368085) Clostridium clariflavum DSM 19732 11562487 YP_005046592.1 CDS Clocl_2071 NC_016627.1 2368090 2369307 R PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE; stage III sporulation protein AE complement(2368090..2369307) Clostridium clariflavum DSM 19732 11562488 YP_005046593.1 CDS Clocl_2072 NC_016627.1 2369326 2369715 R PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD; stage III sporulation protein AD complement(2369326..2369715) Clostridium clariflavum DSM 19732 11562489 YP_005046594.1 CDS Clocl_2073 NC_016627.1 2369736 2369930 R PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC; stage III sporulation protein AC complement(2369736..2369930) Clostridium clariflavum DSM 19732 11562490 YP_005046595.1 CDS Clocl_2074 NC_016627.1 2370116 2370631 R PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB; stage III sporulation protein AB complement(2370116..2370631) Clostridium clariflavum DSM 19732 11562491 YP_005046596.1 CDS Clocl_2075 NC_016627.1 2370622 2371644 R TIGRFAM: stage III sporulation protein AA; stage III sporulation protein AA complement(2370622..2371644) Clostridium clariflavum DSM 19732 11562492 YP_005046597.1 CDS Clocl_2076 NC_016627.1 2371908 2373176 R PFAM: Permease family; TIGRFAM: uracil-xanthine permease; uracil-xanthine permease complement(2371908..2373176) Clostridium clariflavum DSM 19732 11562493 YP_005046598.1 CDS Clocl_2077 NC_016627.1 2373661 2375346 D TIGRFAM: RNA polymerase sigma-I factor; manually curated; hypothetical protein 2373661..2375346 Clostridium clariflavum DSM 19732 11562494 YP_005046599.1 CDS Clocl_2078 NC_016627.1 2375497 2376459 R hypothetical protein complement(2375497..2376459) Clostridium clariflavum DSM 19732 11562495 YP_005046600.1 CDS Clocl_2079 NC_016627.1 2376578 2378098 R PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(2376578..2378098) Clostridium clariflavum DSM 19732 11562496 YP_005046601.1 CDS Clocl_2080 NC_016627.1 2378336 2379325 R PFAM: Dihydrodipicolinate reductase, N-terminus; TIGRFAM: diaminopimelate dehydrogenase; diaminopimelate dehydrogenase complement(2378336..2379325) Clostridium clariflavum DSM 19732 11562497 YP_005046602.1 CDS Clocl_2081 NC_016627.1 2379418 2382075 R PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; DNA segregation ATPase FtsK complement(2379418..2382075) Clostridium clariflavum DSM 19732 11562498 YP_005046603.1 CDS Clocl_2082 NC_016627.1 2382245 2383474 R hypothetical protein complement(2382245..2383474) Clostridium clariflavum DSM 19732 11562499 YP_005046604.1 CDS Clocl_2083 NC_016627.1 2384241 2386223 D PFAM: Glycosyl hydrolase family 10; Glycosyl hydrolases family 11; beta-1,4-xylanase 2384241..2386223 Clostridium clariflavum DSM 19732 11562500 YP_005046605.1 CDS Clocl_2084 NC_016627.1 2386848 2388470 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(2386848..2388470) Clostridium clariflavum DSM 19732 11562501 YP_005046606.1 CDS Clocl_2085 NC_016627.1 2388593 2389510 R PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(2388593..2389510) Clostridium clariflavum DSM 19732 11562502 YP_005046607.1 CDS Clocl_2086 NC_016627.1 2389528 2390496 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type polysaccharide transport system, permease component complement(2389528..2390496) Clostridium clariflavum DSM 19732 11562503 YP_005046608.1 CDS Clocl_2087 NC_016627.1 2390648 2392327 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(2390648..2392327) Clostridium clariflavum DSM 19732 11562504 YP_005046609.1 CDS Clocl_2088 NC_016627.1 2392517 2393755 R hypothetical protein complement(2392517..2393755) Clostridium clariflavum DSM 19732 11562505 YP_005046610.1 CDS Clocl_2089 NC_016627.1 2393757 2395418 R PFAM: ABC transporter; ABC transporter transmembrane region; ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain complement(2393757..2395418) Clostridium clariflavum DSM 19732 11562506 YP_005046611.1 CDS Clocl_2090 NC_016627.1 2395415 2395876 R hypothetical protein complement(2395415..2395876) Clostridium clariflavum DSM 19732 11562507 YP_005046612.1 CDS Clocl_2091 NC_016627.1 2395873 2396139 R PFAM: Coenzyme PQQ synthesis protein D (PqqD); Coenzyme PQQ synthesis protein D (PqqD) complement(2395873..2396139) Clostridium clariflavum DSM 19732 11562508 YP_005046613.1 CDS Clocl_2092 NC_016627.1 2396206 2396907 R hypothetical protein complement(2396206..2396907) Clostridium clariflavum DSM 19732 11562509 YP_005046614.1 CDS Clocl_2093 NC_016627.1 2397147 2397260 R hypothetical protein complement(2397147..2397260) Clostridium clariflavum DSM 19732 11562510 YP_005046615.1 CDS Clocl_2094 NC_016627.1 2397394 2399799 R PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat; hypothetical protein complement(2397394..2399799) Clostridium clariflavum DSM 19732 11562511 YP_005046616.1 CDS Clocl_2095 NC_016627.1 2399950 2401305 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family complement(2399950..2401305) Clostridium clariflavum DSM 19732 11562512 YP_005046617.1 CDS Clocl_2096 NC_016627.1 2401552 2402814 R PFAM: Protein of unknown function (DUF3237); Dockerin type I repeat; dockerin-like protein complement(2401552..2402814) Clostridium clariflavum DSM 19732 11562513 YP_005046618.1 CDS Clocl_2097 NC_016627.1 2403074 2404876 R PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; lysophospholipase L1-like esterase complement(2403074..2404876) Clostridium clariflavum DSM 19732 11562514 YP_005046619.1 CDS Clocl_2098 NC_016627.1 2405199 2406740 R PFAM: Alpha-L-arabinofuranosidase B (ABFB); Alpha-L-arabinofuranosidase B (ABFB) complement(2405199..2406740) Clostridium clariflavum DSM 19732 11562515 YP_005046620.1 CDS Clocl_2099 NC_016627.1 2406782 2407513 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor complement(2406782..2407513) Clostridium clariflavum DSM 19732 11562516 YP_005046621.1 CDS Clocl_2100 NC_016627.1 2408323 2409054 R PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase complement(2408323..2409054) Clostridium clariflavum DSM 19732 11562517 YP_005046622.1 CDS Clocl_2101 NC_016627.1 2409463 2409831 R hypothetical protein complement(2409463..2409831) Clostridium clariflavum DSM 19732 11562518 YP_005046623.1 CDS Clocl_2102 NC_016627.1 2409959 2410450 R PFAM: Domain of unknown function (DUF1877); hypothetical protein complement(2409959..2410450) Clostridium clariflavum DSM 19732 11562519 YP_005046624.1 CDS Clocl_2103 NC_016627.1 2410865 2412154 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 2410865..2412154 Clostridium clariflavum DSM 19732 11562520 YP_005046625.1 CDS Clocl_2104 NC_016627.1 2412348 2412743 R hypothetical protein complement(2412348..2412743) Clostridium clariflavum DSM 19732 11562521 YP_005046626.1 CDS Clocl_2105 NC_016627.1 2413119 2413289 D hypothetical protein 2413119..2413289 Clostridium clariflavum DSM 19732 11562522 YP_005046627.1 CDS Clocl_2106 NC_016627.1 2413916 2414203 R hypothetical protein complement(2413916..2414203) Clostridium clariflavum DSM 19732 11562523 YP_005046628.1 CDS Clocl_2107 NC_016627.1 2414222 2418025 R PFAM: Transglutaminase-like superfamily; transglutaminase complement(2414222..2418025) Clostridium clariflavum DSM 19732 11562524 YP_005046629.1 CDS Clocl_2108 NC_016627.1 2418166 2422791 R PFAM: S-layer homology domain; squalene cyclase complement(2418166..2422791) Clostridium clariflavum DSM 19732 11562525 YP_005046630.1 CDS Clocl_2110 NC_016627.1 2423477 2424583 R PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein, YbgI/SA1388 family complement(2423477..2424583) Clostridium clariflavum DSM 19732 11562527 YP_005046631.1 CDS Clocl_2111 NC_016627.1 2424596 2425318 R PFAM: Family of unknown function (DUF633); putative SAM-dependent methyltransferase complement(2424596..2425318) Clostridium clariflavum DSM 19732 11562528 YP_005046632.1 CDS Clocl_2112 NC_016627.1 2425477 2425659 D hypothetical protein 2425477..2425659 Clostridium clariflavum DSM 19732 11562529 YP_005046633.1 CDS Clocl_2113 NC_016627.1 2425848 2426552 R PFAM: 4Fe-4S binding domain; 4Fe-4S binding protein complement(2425848..2426552) Clostridium clariflavum DSM 19732 11562530 YP_005046634.1 CDS Clocl_2114 NC_016627.1 2426693 2427361 D PFAM: Cyclic nucleotide-binding domain; cAMP-binding protein 2426693..2427361 Clostridium clariflavum DSM 19732 11562531 YP_005046635.1 CDS Clocl_2117 NC_016627.1 2427914 2428135 R PFAM: Rubrerythrin; rubrerythrin complement(2427914..2428135) Clostridium clariflavum DSM 19732 11562534 YP_005046636.1 CDS Clocl_2118 NC_016627.1 2428534 2429613 R PFAM: Sigma-70, region 4; Sigma-70 factor, region 1.1; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; manually curated; RNA polymerase, sigma 38 subunit, RpoS complement(2428534..2429613) Clostridium clariflavum DSM 19732 11562535 YP_005046637.1 CDS Clocl_2119 NC_016627.1 2429648 2431435 R PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; manually curated; DNA primase, catalytic core complement(2429648..2431435) Clostridium clariflavum DSM 19732 11562536 YP_005046638.1 CDS Clocl_2120 NC_016627.1 2431994 2432989 R PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase, putative complement(2431994..2432989) Clostridium clariflavum DSM 19732 11562537 YP_005046639.1 CDS Clocl_2121 NC_016627.1 2433168 2433473 R hypothetical protein complement(2433168..2433473) Clostridium clariflavum DSM 19732 11562538 YP_005046640.1 CDS Clocl_2122 NC_016627.1 2433668 2434702 R PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein complement(2433668..2434702) Clostridium clariflavum DSM 19732 11562539 YP_005046641.1 CDS Clocl_2123 NC_016627.1 2435038 2435319 D hypothetical protein 2435038..2435319 Clostridium clariflavum DSM 19732 11562540 YP_005046642.1 CDS Clocl_2124 NC_016627.1 2435425 2435817 R PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; manually curated; L-aspartate 1-decarboxylase complement(2435425..2435817) Clostridium clariflavum DSM 19732 11562541 YP_005046643.1 CDS Clocl_2125 NC_016627.1 2435820 2436665 R PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; pantoate--beta-alanine ligase complement(2435820..2436665) Clostridium clariflavum DSM 19732 11562542 YP_005046644.1 CDS Clocl_2126 NC_016627.1 2436776 2437621 R PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; ketopantoate hydroxymethyltransferase complement(2436776..2437621) Clostridium clariflavum DSM 19732 11562543 YP_005046645.1 CDS Clocl_2127 NC_016627.1 2438094 2439038 R PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein translocase subunit secF complement(2438094..2439038) Clostridium clariflavum DSM 19732 11562544 YP_005046646.1 CDS Clocl_2128 NC_016627.1 2439031 2440365 R PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein, SecD/SecF family complement(2439031..2440365) Clostridium clariflavum DSM 19732 11562545 YP_005046647.1 CDS Clocl_2129 NC_016627.1 2440471 2441136 R PFAM: HD domain; HD domain-containing protein complement(2440471..2441136) Clostridium clariflavum DSM 19732 11562546 YP_005046648.1 CDS Clocl_2130 NC_016627.1 2441280 2442626 R PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain; six-Cys-in-45 modification radical SAM protein complement(2441280..2442626) Clostridium clariflavum DSM 19732 11562547 YP_005046649.1 CDS Clocl_2131 NC_016627.1 2442828 2442968 R TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated; rSAM-modified six-cysteine peptide SCIFF complement(2442828..2442968) Clostridium clariflavum DSM 19732 11562548 YP_005046650.1 CDS Clocl_2132 NC_016627.1 2443132 2444067 R PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase complement(2443132..2444067) Clostridium clariflavum DSM 19732 11562549 YP_005046651.1 CDS Clocl_2133 NC_016627.1 2444085 2444558 R PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase complement(2444085..2444558) Clostridium clariflavum DSM 19732 11562550 YP_005046652.1 CDS Clocl_2134 NC_016627.1 2444919 2446169 R PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase, putative complement(2444919..2446169) Clostridium clariflavum DSM 19732 11562551 YP_005046653.1 CDS Clocl_2135 NC_016627.1 2446398 2447189 R PFAM: Binding-protein-dependent transport system inner membrane component; manually curated; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2446398..2447189) Clostridium clariflavum DSM 19732 11562552 YP_005046654.1 CDS Clocl_2136 NC_016627.1 2447216 2447989 R PFAM: Binding-protein-dependent transport system inner membrane component; manually curated; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2447216..2447989) Clostridium clariflavum DSM 19732 11562553 YP_005046655.1 CDS Clocl_2137 NC_016627.1 2448014 2448178 R PFAM: Uncharacterized small protein (DUF2292); hypothetical protein complement(2448014..2448178) Clostridium clariflavum DSM 19732 11562554 YP_005046656.1 CDS Clocl_2138 NC_016627.1 2448463 2449779 R PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; nitrogenase molybdenum-iron protein, alpha and beta chains complement(2448463..2449779) Clostridium clariflavum DSM 19732 11562555 YP_005046657.1 CDS Clocl_2139 NC_016627.1 2449763 2451253 R PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains complement(2449763..2451253) Clostridium clariflavum DSM 19732 11562556 YP_005046658.1 CDS Clocl_2140 NC_016627.1 2451286 2452107 R PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; Mo-nitrogenase iron protein subunit NifH complement(2451286..2452107) Clostridium clariflavum DSM 19732 11562557 YP_005046659.1 CDS Clocl_2141 NC_016627.1 2452502 2453584 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2452502..2453584) Clostridium clariflavum DSM 19732 11562558 YP_005046660.1 CDS Clocl_2142 NC_016627.1 2453928 2454917 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2453928..2454917) Clostridium clariflavum DSM 19732 11562559 YP_005046661.1 CDS Clocl_2143 NC_016627.1 2454928 2455707 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2454928..2455707) Clostridium clariflavum DSM 19732 11562560 YP_005046662.1 CDS Clocl_2144 NC_016627.1 2455835 2456797 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2455835..2456797) Clostridium clariflavum DSM 19732 11562561 YP_005046663.1 CDS Clocl_2145 NC_016627.1 2456976 2457374 R PFAM: Pyridoxamine 5'-phosphate oxidase; hypothetical protein complement(2456976..2457374) Clostridium clariflavum DSM 19732 11562562 YP_005046664.1 CDS Clocl_2146 NC_016627.1 2457726 2457851 R hypothetical protein complement(2457726..2457851) Clostridium clariflavum DSM 19732 11562563 YP_005046665.1 CDS Clocl_2147 NC_016627.1 2457848 2458123 R hypothetical protein complement(2457848..2458123) Clostridium clariflavum DSM 19732 11562564 YP_005046666.1 CDS Clocl_2148 NC_016627.1 2458370 2460028 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter periplasmic protein complement(2458370..2460028) Clostridium clariflavum DSM 19732 11562565 YP_005046667.1 CDS Clocl_2149 NC_016627.1 2460044 2460886 R PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein complement(2460044..2460886) Clostridium clariflavum DSM 19732 11562566 YP_005046668.1 CDS Clocl_2150 NC_016627.1 2461217 2461558 D hypothetical protein 2461217..2461558 Clostridium clariflavum DSM 19732 11562567 YP_005046669.1 CDS Clocl_2151 NC_016627.1 2461560 2462762 D PFAM: Sodium/hydrogen exchanger family; Kef-type K+ transport system membrane protein 2461560..2462762 Clostridium clariflavum DSM 19732 11562568 YP_005046670.1 CDS Clocl_2152 NC_016627.1 2462829 2463464 R PFAM: PilZ domain; PilZ domain-containing protein complement(2462829..2463464) Clostridium clariflavum DSM 19732 11562569 YP_005046671.1 CDS Clocl_2153 NC_016627.1 2463718 2464599 D hypothetical protein 2463718..2464599 Clostridium clariflavum DSM 19732 11562570 YP_005046672.1 CDS Clocl_2154 NC_016627.1 2464684 2466411 R PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutamyl-tRNA synthetase, archaeal and eukaryotic family; glutaminyl-tRNA synthetase complement(2464684..2466411) Clostridium clariflavum DSM 19732 11562571 YP_005046673.1 CDS Clocl_2155 NC_016627.1 2466466 2466891 R PFAM: GtrA-like protein; hypothetical protein complement(2466466..2466891) Clostridium clariflavum DSM 19732 11562572 YP_005046674.1 CDS Clocl_2156 NC_016627.1 2466937 2468433 R PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; IMP dehydrogenase/GMP reductase complement(2466937..2468433) Clostridium clariflavum DSM 19732 11562573 YP_005046675.1 CDS Clocl_2157 NC_016627.1 2468620 2469375 R PFAM: short chain dehydrogenase; TIGRFAM: sepiapterin reductase; dehydrogenase complement(2468620..2469375) Clostridium clariflavum DSM 19732 11562574 YP_005046676.1 CDS Clocl_2158 NC_016627.1 2469889 2470497 R TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein complement(2469889..2470497) Clostridium clariflavum DSM 19732 11562575 YP_005046677.1 CDS Clocl_2159 NC_016627.1 2470683 2472248 D PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase; glycine/D-amino acid oxidase, deaminating 2470683..2472248 Clostridium clariflavum DSM 19732 11562576 YP_005046678.1 CDS Clocl_2160 NC_016627.1 2472323 2472937 R PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein complement(2472323..2472937) Clostridium clariflavum DSM 19732 11562577 YP_005046679.1 CDS Clocl_2161 NC_016627.1 2472912 2473073 R hypothetical protein complement(2472912..2473073) Clostridium clariflavum DSM 19732 11562578 YP_005046680.1 CDS Clocl_2162 NC_016627.1 2473255 2473719 R PFAM: CheC-like family; putative inhibitor of MCP methylation, CheC complement(2473255..2473719) Clostridium clariflavum DSM 19732 11562579 YP_005046681.1 CDS Clocl_2164 NC_016627.1 2474299 2474913 R PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated exonuclease, Cas4 family complement(2474299..2474913) Clostridium clariflavum DSM 19732 11562581 YP_005046682.1 CDS Clocl_2165 NC_016627.1 2474888 2475178 R PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; CRISPR-associated protein, Cas2 family complement(2474888..2475178) Clostridium clariflavum DSM 19732 11562582 YP_005046683.1 CDS Clocl_2166 NC_016627.1 2475172 2476167 R PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; CRISPR-associated protein, Cas1 family complement(2475172..2476167) Clostridium clariflavum DSM 19732 11562583 YP_005046684.1 CDS Clocl_2167 NC_016627.1 2478926 2480401 R PFAM: CRISPR-associated protein (Cas_Cas02710); TIGRFAM: CRISPR-associated protein, TIGR02710 family; CRISPR-associated protein complement(2478926..2480401) Clostridium clariflavum DSM 19732 11562584 YP_005046685.1 CDS Clocl_2168 NC_016627.1 2480453 2481700 R PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein; CRISPR-associated protein complement(2480453..2481700) Clostridium clariflavum DSM 19732 11562585 YP_005046686.1 CDS Clocl_2169 NC_016627.1 2481750 2483825 R PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein; manually curated; CRISPR-associated protein complement(2481750..2483825) Clostridium clariflavum DSM 19732 11562586 YP_005046687.1 CDS Clocl_2170 NC_016627.1 2483840 2484205 R hypothetical protein complement(2483840..2484205) Clostridium clariflavum DSM 19732 11562587 YP_005046688.1 CDS Clocl_2171 NC_016627.1 2484212 2485543 R PFAM: RAMP superfamily; putative RAMP superfamily protein probably involved in DNA repair complement(2484212..2485543) Clostridium clariflavum DSM 19732 11562588 YP_005046689.1 CDS Clocl_2172 NC_016627.1 2485540 2487141 R PFAM: RAMP superfamily; RAMP superfamily protein complement(2485540..2487141) Clostridium clariflavum DSM 19732 11562589 YP_005046690.1 CDS Clocl_2173 NC_016627.1 2487134 2487808 R PFAM: RAMP superfamily; putative RAMP superfamily protein probably involved in DNA repair complement(2487134..2487808) Clostridium clariflavum DSM 19732 11562590 YP_005046691.1 CDS Clocl_2174 NC_016627.1 2487811 2489274 R hypothetical protein complement(2487811..2489274) Clostridium clariflavum DSM 19732 11562591 YP_005046692.1 CDS Clocl_2175 NC_016627.1 2489321 2489980 R hypothetical protein complement(2489321..2489980) Clostridium clariflavum DSM 19732 11562592 YP_005046693.1 CDS Clocl_2176 NC_016627.1 2490008 2492404 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase, Cas3 family complement(2490008..2492404) Clostridium clariflavum DSM 19732 11562593 YP_005046694.1 CDS Clocl_2177 NC_016627.1 2492418 2493131 R PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/HMARI; CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein, Cas5h family complement(2492418..2493131) Clostridium clariflavum DSM 19732 11562594 YP_005046695.1 CDS Clocl_2178 NC_016627.1 2493146 2494063 R PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI; Csh2 family CRISPR-associated protein complement(2493146..2494063) Clostridium clariflavum DSM 19732 11562595 YP_005046696.1 CDS Clocl_2179 NC_016627.1 2494060 2495940 R PFAM: CRISPR-associated protein TM1802 (cas_TM1802); TIGRFAM: CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI; CRISPR-associated protein, TM1802 family; manually curated; CRISPR-associated protein, Csh1 family complement(2494060..2495940) Clostridium clariflavum DSM 19732 11562596 YP_005046697.1 CDS Clocl_2180 NC_016627.1 2502349 2504202 R PFAM: Protein of unknown function DUF115; hypothetical protein complement(2502349..2504202) Clostridium clariflavum DSM 19732 11562597 YP_005046698.1 CDS Clocl_2181 NC_016627.1 2504271 2504726 R PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; transcriptional regulator NrdR complement(2504271..2504726) Clostridium clariflavum DSM 19732 11562598 YP_005046699.1 CDS Clocl_2182 NC_016627.1 2504953 2505222 R PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family; YlmC/YmxH family sporulation protein complement(2504953..2505222) Clostridium clariflavum DSM 19732 11562599 YP_005046700.1 CDS Clocl_2183 NC_016627.1 2505392 2506165 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma-subunit RpsG/SigG complement(2505392..2506165) Clostridium clariflavum DSM 19732 11562600 YP_005046701.1 CDS Clocl_2184 NC_016627.1 2506334 2507068 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor; RNA polymerase sigma-29 subunit SigE complement(2506334..2507068) Clostridium clariflavum DSM 19732 11562601 YP_005046702.1 CDS Clocl_2185 NC_016627.1 2507108 2508004 R PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; sigma-E processing peptidase SpoIIGA complement(2507108..2508004) Clostridium clariflavum DSM 19732 11562602 YP_005046703.1 CDS Clocl_2186 NC_016627.1 2508353 2508667 D hypothetical protein 2508353..2508667 Clostridium clariflavum DSM 19732 11562603 YP_005046704.1 CDS Clocl_2187 NC_016627.1 2508784 2509878 R PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ complement(2508784..2509878) Clostridium clariflavum DSM 19732 11562604 YP_005046705.1 CDS Clocl_2188 NC_016627.1 2510089 2511324 R PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; manually curated; cell division protein FtsA complement(2510089..2511324) Clostridium clariflavum DSM 19732 11562605 YP_005046706.1 CDS Clocl_2189 NC_016627.1 2511531 2511896 R PFAM: Protein of unknown function (DUF1290); hypothetical protein complement(2511531..2511896) Clostridium clariflavum DSM 19732 11562606 YP_005046707.1 CDS Clocl_2190 NC_016627.1 2511909 2512775 R PFAM: POTRA domain, FtsQ-type; cell division septal protein complement(2511909..2512775) Clostridium clariflavum DSM 19732 11562607 YP_005046708.1 CDS Clocl_2192 NC_016627.1 2514009 2515412 D PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain; UDP-N-acetylmuramyl tripeptide synthase 2514009..2515412 Clostridium clariflavum DSM 19732 11562609 YP_005046709.1 CDS Clocl_2193 NC_016627.1 2515414 2516160 D PFAM: CobB/CobQ-like glutamine amidotransferase domain; putative glutamine amidotransferase 2515414..2516160 Clostridium clariflavum DSM 19732 11562610 YP_005046710.1 CDS Clocl_2194 NC_016627.1 2516223 2520338 R PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; beta-1,4-xylanase complement(2516223..2520338) Clostridium clariflavum DSM 19732 11562611 YP_005046711.1 CDS Clocl_2195 NC_016627.1 2520889 2521290 R manually curated; hypothetical protein complement(2520889..2521290) Clostridium clariflavum DSM 19732 11562612 YP_005046712.1 CDS Clocl_2196 NC_016627.1 2521452 2522267 R hypothetical protein complement(2521452..2522267) Clostridium clariflavum DSM 19732 11562613 YP_005046713.1 CDS Clocl_2197 NC_016627.1 2522381 2524081 R PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase, family II complement(2522381..2524081) Clostridium clariflavum DSM 19732 11562614 YP_005046714.1 CDS Clocl_2198 NC_016627.1 2524307 2525506 R PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(2524307..2525506) Clostridium clariflavum DSM 19732 11562615 YP_005046715.1 CDS Clocl_2199 NC_016627.1 2525617 2526183 R PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; pyridoxal phosphate synthase yaaE subunit complement(2525617..2526183) Clostridium clariflavum DSM 19732 11562616 YP_005046716.1 CDS Clocl_2200 NC_016627.1 2526197 2527072 R PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; pyridoxal phosphate synthase yaaD subunit complement(2526197..2527072) Clostridium clariflavum DSM 19732 11562617 YP_005046717.1 CDS Clocl_2201 NC_016627.1 2527188 2528588 D PFAM: Bacterial regulatory proteins, gntR family; transcriptional regulator with HTH domain and aminotransferase domain 2527188..2528588 Clostridium clariflavum DSM 19732 11562618 YP_005046718.1 CDS Clocl_2202 NC_016627.1 2528596 2529531 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase A complement(2528596..2529531) Clostridium clariflavum DSM 19732 11562619 YP_005046719.1 CDS Clocl_2203 NC_016627.1 2529602 2530882 R PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; O-acetylhomoserine sulfhydrolase complement(2529602..2530882) Clostridium clariflavum DSM 19732 11562620 YP_005046720.1 CDS Clocl_2204 NC_016627.1 2530951 2531400 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator complement(2530951..2531400) Clostridium clariflavum DSM 19732 11562621 YP_005046721.1 CDS Clocl_2205 NC_016627.1 2531494 2531952 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator complement(2531494..2531952) Clostridium clariflavum DSM 19732 11562622 YP_005046722.1 CDS Clocl_2206 NC_016627.1 2531971 2532909 R PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(2531971..2532909) Clostridium clariflavum DSM 19732 11562623 YP_005046723.1 CDS Clocl_2207 NC_016627.1 2533235 2533447 R PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein; copper ion binding protein complement(2533235..2533447) Clostridium clariflavum DSM 19732 11562624 YP_005046724.1 CDS Clocl_2208 NC_016627.1 2533569 2536001 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; manually curated; copper/silver-translocating P-type ATPase complement(2533569..2536001) Clostridium clariflavum DSM 19732 11562625 YP_005046725.1 CDS Clocl_2209 NC_016627.1 2536079 2536603 R PFAM: Predicted membrane protein (DUF2318); hypothetical protein complement(2536079..2536603) Clostridium clariflavum DSM 19732 11562626 YP_005046726.1 CDS Clocl_2210 NC_016627.1 2536642 2538027 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase,HAMP domain-containing protein,histidine kinase complement(2536642..2538027) Clostridium clariflavum DSM 19732 11562627 YP_005046727.1 CDS Clocl_2211 NC_016627.1 2538017 2538730 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(2538017..2538730) Clostridium clariflavum DSM 19732 11562628 YP_005046728.1 CDS Clocl_2212 NC_016627.1 2538810 2540195 R PFAM: Heavy-metal-associated domain; Cytochrome C biogenesis protein transmembrane region; hypothetical protein complement(2538810..2540195) Clostridium clariflavum DSM 19732 11562629 YP_005046729.1 CDS Clocl_2213 NC_016627.1 2540263 2541813 R PFAM: Recombinase; Resolvase, N terminal domain; manually curated; site-specific recombinase, DNA invertase Pin complement(2540263..2541813) Clostridium clariflavum DSM 19732 11562630 YP_005046730.1 CDS Clocl_2214 NC_016627.1 2541855 2542007 R hypothetical protein complement(2541855..2542007) Clostridium clariflavum DSM 19732 11562631 YP_005046731.1 CDS Clocl_2215 NC_016627.1 2542043 2542351 R PFAM: ArgK protein; ArgK protein complement(2542043..2542351) Clostridium clariflavum DSM 19732 11562632 YP_005046732.1 CDS Clocl_2216 NC_016627.1 2542557 2543378 D hypothetical protein 2542557..2543378 Clostridium clariflavum DSM 19732 11562633 YP_005046733.1 CDS Clocl_2217 NC_016627.1 2543557 2544000 R PFAM: NUDIX domain; ADP-ribose pyrophosphatase complement(2543557..2544000) Clostridium clariflavum DSM 19732 11562634 YP_005046734.1 CDS Clocl_2218 NC_016627.1 2544478 2546016 R PFAM: Phospholipase D Active site motif; manually curated; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase complement(2544478..2546016) Clostridium clariflavum DSM 19732 11562635 YP_005046735.1 CDS Clocl_2219 NC_016627.1 2546161 2547774 R hypothetical protein complement(2546161..2547774) Clostridium clariflavum DSM 19732 11562636 YP_005046736.1 CDS Clocl_2220 NC_016627.1 2547764 2548498 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(2547764..2548498) Clostridium clariflavum DSM 19732 11562637 YP_005046737.1 CDS Clocl_2221 NC_016627.1 2548546 2549505 R PFAM: Acetyl xylan esterase (AXE1); acetyl esterase complement(2548546..2549505) Clostridium clariflavum DSM 19732 11562638 YP_005046738.1 CDS Clocl_2222 NC_016627.1 2549544 2550731 R PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; nucleotidyltransferase/DNA polymerase involved in DNA repair complement(2549544..2550731) Clostridium clariflavum DSM 19732 11562639 YP_005046739.1 CDS Clocl_2223 NC_016627.1 2550774 2553044 R PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase complement(2550774..2553044) Clostridium clariflavum DSM 19732 11562640 YP_005046740.1 CDS Clocl_2224 NC_016627.1 2553255 2553800 R hypothetical protein complement(2553255..2553800) Clostridium clariflavum DSM 19732 11562641 YP_005046741.1 CDS Clocl_2225 NC_016627.1 2554037 2556163 R PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; thioredoxin domain-containing protein complement(2554037..2556163) Clostridium clariflavum DSM 19732 11562642 YP_005046742.1 CDS Clocl_2226 NC_016627.1 2556454 2557323 R hypothetical protein complement(2556454..2557323) Clostridium clariflavum DSM 19732 11562643 YP_005046743.1 CDS Clocl_2227 NC_016627.1 2557732 2558271 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2557732..2558271) Clostridium clariflavum DSM 19732 11562644 YP_005046744.1 CDS Clocl_2228 NC_016627.1 2558385 2558825 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; acyl-CoA thioester hydrolase, YbgC/YbaW family complement(2558385..2558825) Clostridium clariflavum DSM 19732 11562645 YP_005046745.1 CDS Clocl_2229 NC_016627.1 2558918 2559892 R PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase complement(2558918..2559892) Clostridium clariflavum DSM 19732 11562646 YP_005046746.1 CDS Clocl_2230 NC_016627.1 2560108 2560305 R manually curated; hypothetical protein complement(2560108..2560305) Clostridium clariflavum DSM 19732 11562647 YP_005046747.1 CDS Clocl_2231 NC_016627.1 2560235 2560435 R hypothetical protein complement(2560235..2560435) Clostridium clariflavum DSM 19732 11562648 YP_005046748.1 CDS Clocl_2232 NC_016627.1 2560410 2560643 R PFAM: Tryptophan RNA-binding attenuator protein; Tryptophan RNA-binding attenuator protein complement(2560410..2560643) Clostridium clariflavum DSM 19732 11562649 YP_005046749.1 CDS Clocl_2233 NC_016627.1 2560818 2564327 R PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA-directed DNA polymerase III PolC complement(2560818..2564327) Clostridium clariflavum DSM 19732 11562650 YP_005046750.1 CDS Clocl_2234 NC_016627.1 2564461 2566203 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase complement(2564461..2566203) Clostridium clariflavum DSM 19732 11562651 YP_005046751.1 CDS Clocl_2235 NC_016627.1 2567155 2568384 R PFAM: Transposase, Mutator family; transposase complement(2567155..2568384) Clostridium clariflavum DSM 19732 11562652 YP_005046752.1 CDS Clocl_2236 NC_016627.1 2568685 2569668 D PFAM: Helix-turn-helix; manually curated; putative transcription factor, MBF1 like protein 2568685..2569668 Clostridium clariflavum DSM 19732 11562653 YP_005046753.1 CDS Clocl_2237 NC_016627.1 2569965 2570186 D PFAM: Bacterial protein of unknown function (DUF896); hypothetical protein 2569965..2570186 Clostridium clariflavum DSM 19732 11562654 YP_005046754.1 CDS Clocl_2239 NC_016627.1 2570706 2571356 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain complement(2570706..2571356) Clostridium clariflavum DSM 19732 11562655 YP_005046755.1 CDS Clocl_2240 NC_016627.1 2571349 2572524 R PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(2571349..2572524) Clostridium clariflavum DSM 19732 11562656 YP_005046756.1 CDS Clocl_2241 NC_016627.1 2572886 2574154 D PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ; sporulation integral membrane protein YlbJ 2572886..2574154 Clostridium clariflavum DSM 19732 11562657 YP_005046757.1 CDS Clocl_2242 NC_016627.1 2574300 2574737 R hypothetical protein complement(2574300..2574737) Clostridium clariflavum DSM 19732 11562658 YP_005046758.1 CDS Clocl_2243 NC_016627.1 2574885 2575364 R PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; pantetheine-phosphate adenylyltransferase complement(2574885..2575364) Clostridium clariflavum DSM 19732 11562659 YP_005046759.1 CDS Clocl_2244 NC_016627.1 2575371 2575868 R PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; RNA methyltransferase, RsmD family complement(2575371..2575868) Clostridium clariflavum DSM 19732 11562660 YP_005046760.1 CDS Clocl_2245 NC_016627.1 2576038 2578119 R PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG complement(2576038..2578119) Clostridium clariflavum DSM 19732 11562661 YP_005046761.1 CDS Clocl_2246 NC_016627.1 2578313 2578501 D PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28P 2578313..2578501 Clostridium clariflavum DSM 19732 11562662 YP_005046762.1 CDS Clocl_2247 NC_016627.1 2578906 2579169 R PFAM: Transglycosylase associated protein; transglycosylase complement(2578906..2579169) Clostridium clariflavum DSM 19732 11562663 YP_005046763.1 CDS Clocl_2248 NC_016627.1 2579350 2580042 D hypothetical protein 2579350..2580042 Clostridium clariflavum DSM 19732 11562664 YP_005046764.1 CDS Clocl_2249 NC_016627.1 2580107 2581813 R PFAM: GGDEF domain; GAF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(2580107..2581813) Clostridium clariflavum DSM 19732 11562665 YP_005046765.1 CDS Clocl_2250 NC_016627.1 2581877 2584090 R PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; actin-like ATPase involved in cell division complement(2581877..2584090) Clostridium clariflavum DSM 19732 11562666 YP_005046766.1 CDS Clocl_2251 NC_016627.1 2584146 2584790 R PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease III, DNA-(apurinic or apyrimidinic site) lyase complement(2584146..2584790) Clostridium clariflavum DSM 19732 11562667 YP_005046767.1 CDS Clocl_2252 NC_016627.1 2584917 2586380 R PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase complement(2584917..2586380) Clostridium clariflavum DSM 19732 11562668 YP_005046768.1 CDS Clocl_2253 NC_016627.1 2586557 2587981 R PFAM: HD domain; HD-GYP domain-containing protein complement(2586557..2587981) Clostridium clariflavum DSM 19732 11562669 YP_005046769.1 CDS Clocl_2254 NC_016627.1 2588309 2589757 R PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); trypsin-like serine protease with C-terminal PDZ domain complement(2588309..2589757) Clostridium clariflavum DSM 19732 11562670 YP_005046770.1 CDS Clocl_2255 NC_016627.1 2589883 2591400 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(2589883..2591400) Clostridium clariflavum DSM 19732 11562671 YP_005046771.1 CDS Clocl_2256 NC_016627.1 2591400 2592086 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(2591400..2592086) Clostridium clariflavum DSM 19732 11562672 YP_005046772.1 CDS Clocl_2257 NC_016627.1 2592287 2592475 R hypothetical protein complement(2592287..2592475) Clostridium clariflavum DSM 19732 11562673 YP_005046773.1 CDS Clocl_2258 NC_016627.1 2592889 2593218 D hypothetical protein 2592889..2593218 Clostridium clariflavum DSM 19732 11562674 YP_005046774.1 CDS Clocl_2259 NC_016627.1 2593242 2594102 R PFAM: Amidohydrolase; putative TIM-barrel fold metal-dependent hydrolase complement(2593242..2594102) Clostridium clariflavum DSM 19732 11562675 YP_005046775.1 CDS Clocl_2260 NC_016627.1 2594293 2595501 D PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase; homoserine kinase 2594293..2595501 Clostridium clariflavum DSM 19732 11562676 YP_005046776.1 CDS Clocl_2261 NC_016627.1 2595634 2596641 R PFAM: HD domain; HD-GYP domain-containing protein complement(2595634..2596641) Clostridium clariflavum DSM 19732 11562677 YP_005046777.1 CDS Clocl_2262 NC_016627.1 2596850 2597614 D PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain; putative transcriptional regulator 2596850..2597614 Clostridium clariflavum DSM 19732 11562678 YP_005046778.1 CDS Clocl_2263 NC_016627.1 2597709 2598326 R PFAM: Uncharacterised ACR, COG2135; hypothetical protein complement(2597709..2598326) Clostridium clariflavum DSM 19732 11562679 YP_005046779.1 CDS Clocl_2264 NC_016627.1 2598357 2598593 R hypothetical protein complement(2598357..2598593) Clostridium clariflavum DSM 19732 11562680 YP_005046780.1 CDS Clocl_2265 NC_016627.1 2598735 2599976 R PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; nucleotidyltransferase/DNA polymerase involved in DNA repair complement(2598735..2599976) Clostridium clariflavum DSM 19732 11562681 YP_005046781.1 CDS Clocl_2266 NC_016627.1 2600148 2601053 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(2600148..2601053) Clostridium clariflavum DSM 19732 11562682 YP_005046782.1 CDS Clocl_2271 NC_016627.1 2607622 2609247 R PFAM: Mycoplasma protein of unknown function, DUF285; Dockerin type I repeat; hypothetical protein complement(2607622..2609247) Clostridium clariflavum DSM 19732 11562687 YP_005046783.1 CDS Clocl_2272 NC_016627.1 2609281 2609379 R hypothetical protein complement(2609281..2609379) Clostridium clariflavum DSM 19732 11562688 YP_005046784.1 CDS Clocl_2273 NC_016627.1 2609816 2610640 R PFAM: ABC transporter; manually curated; amino acid ABC transporter ATP-binding protein complement(2609816..2610640) Clostridium clariflavum DSM 19732 11562689 YP_005046785.1 CDS Clocl_2274 NC_016627.1 2610624 2611334 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter complement(2610624..2611334) Clostridium clariflavum DSM 19732 11562690 YP_005046786.1 CDS Clocl_2275 NC_016627.1 2611407 2612258 R PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein complement(2611407..2612258) Clostridium clariflavum DSM 19732 11562691 YP_005046787.1 CDS Clocl_2276 NC_016627.1 2612753 2613619 R PFAM: Dockerin type I repeat; dockerin-like protein complement(2612753..2613619) Clostridium clariflavum DSM 19732 11562692 YP_005046788.1 CDS Clocl_2277 NC_016627.1 2613720 2615264 R PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin complement(2613720..2615264) Clostridium clariflavum DSM 19732 11562693 YP_005046789.1 CDS Clocl_2278 NC_016627.1 2615586 2616518 R PFAM: CAAX amino terminal protease family; CAAX amino terminal protease complement(2615586..2616518) Clostridium clariflavum DSM 19732 11562694 YP_005046790.1 CDS Clocl_2279 NC_016627.1 2616583 2617164 R PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase complement(2616583..2617164) Clostridium clariflavum DSM 19732 11562695 YP_005046791.1 CDS Clocl_2280 NC_016627.1 2617166 2617837 R PFAM: Predicted membrane protein (DUF2085); hypothetical protein complement(2617166..2617837) Clostridium clariflavum DSM 19732 11562696 YP_005046792.1 CDS Clocl_2281 NC_016627.1 2617842 2618552 R hypothetical protein complement(2617842..2618552) Clostridium clariflavum DSM 19732 11562697 YP_005046793.1 CDS Clocl_2282 NC_016627.1 2618854 2619162 R PFAM: Ribosomal L25p family; 50S ribosomal protein L25 (general stress protein Ctc) complement(2618854..2619162) Clostridium clariflavum DSM 19732 11562698 YP_005046794.1 CDS Clocl_2283 NC_016627.1 2619235 2619540 R hypothetical protein complement(2619235..2619540) Clostridium clariflavum DSM 19732 11562699 YP_005046795.1 CDS Clocl_2284 NC_016627.1 2619861 2620823 D manually curated; hypothetical protein 2619861..2620823 Clostridium clariflavum DSM 19732 11562700 YP_005046796.1 CDS Clocl_2285 NC_016627.1 2620948 2621394 R PFAM: Domain of unknown function (DUF2383); hypothetical protein complement(2620948..2621394) Clostridium clariflavum DSM 19732 11562701 YP_005046797.1 CDS Clocl_2286 NC_016627.1 2621745 2622992 D PFAM: Protein of unknown function (DUF795); putative nucleotidyltransferase 2621745..2622992 Clostridium clariflavum DSM 19732 11562702 YP_005046798.1 CDS Clocl_2287 NC_016627.1 2623165 2624832 R PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; hypothetical protein complement(2623165..2624832) Clostridium clariflavum DSM 19732 11562703 YP_005046799.1 CDS Clocl_2288 NC_016627.1 2625482 2626705 R PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; glycosyltransferase complement(2625482..2626705) Clostridium clariflavum DSM 19732 11562704 YP_005046800.1 CDS Clocl_2289 NC_016627.1 2627047 2628423 R PFAM: PhoH-like protein; PhoH family protein complement(2627047..2628423) Clostridium clariflavum DSM 19732 11562705 YP_005046801.1 CDS Clocl_2290 NC_016627.1 2628846 2629193 R PFAM: Cupin domain; mannose-6-phosphate isomerase complement(2628846..2629193) Clostridium clariflavum DSM 19732 11562706 YP_005046802.1 CDS Clocl_2291 NC_016627.1 2629489 2629896 D hypothetical protein 2629489..2629896 Clostridium clariflavum DSM 19732 11562707 YP_005046803.1 CDS Clocl_2292 NC_016627.1 2630186 2631064 R PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; nitrogenase iron protein complement(2630186..2631064) Clostridium clariflavum DSM 19732 11562708 YP_005046804.1 CDS Clocl_2293 NC_016627.1 2631360 2633159 R PFAM: Cytochrome C biogenesis protein transmembrane region; hypothetical protein complement(2631360..2633159) Clostridium clariflavum DSM 19732 11562709 YP_005046805.1 CDS Clocl_2294 NC_016627.1 2633213 2634133 R PFAM: S-layer homology domain; putative S-layer protein complement(2633213..2634133) Clostridium clariflavum DSM 19732 11562710 YP_005046806.1 CDS Clocl_2295 NC_016627.1 2634292 2634873 R PFAM: NADPH-dependent FMN reductase; multimeric flavodoxin WrbA complement(2634292..2634873) Clostridium clariflavum DSM 19732 11562711 YP_005046807.1 CDS Clocl_2296 NC_016627.1 2634877 2637210 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper/silver-translocating P-type ATPase complement(2634877..2637210) Clostridium clariflavum DSM 19732 11562712 YP_005046808.1 CDS Clocl_2297 NC_016627.1 2637226 2638107 R PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(2637226..2638107) Clostridium clariflavum DSM 19732 11562713 YP_005046809.1 CDS Clocl_2298 NC_016627.1 2638180 2639220 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(2638180..2639220) Clostridium clariflavum DSM 19732 11562714 YP_005046810.1 CDS Clocl_2299 NC_016627.1 2639309 2640169 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2639309..2640169) Clostridium clariflavum DSM 19732 11562715 YP_005046811.1 CDS Clocl_2300 NC_016627.1 2640153 2640938 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(2640153..2640938) Clostridium clariflavum DSM 19732 11562716 YP_005046812.1 CDS Clocl_2301 NC_016627.1 2640969 2642480 R PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains complement(2640969..2642480) Clostridium clariflavum DSM 19732 11562717 YP_005046813.1 CDS Clocl_2302 NC_016627.1 2642492 2643832 R PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains complement(2642492..2643832) Clostridium clariflavum DSM 19732 11562718 YP_005046814.1 CDS Clocl_2303 NC_016627.1 2643875 2644954 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; uroporphyrinogen-III decarboxylase complement(2643875..2644954) Clostridium clariflavum DSM 19732 11562719 YP_005046815.1 CDS Clocl_2304 NC_016627.1 2645238 2645909 R PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain; putative cobalamin binding protein complement(2645238..2645909) Clostridium clariflavum DSM 19732 11562720 YP_005046816.1 CDS Clocl_2305 NC_016627.1 2645952 2646887 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase A complement(2645952..2646887) Clostridium clariflavum DSM 19732 11562721 YP_005046817.1 CDS Clocl_2306 NC_016627.1 2647026 2647592 R PFAM: Nitroreductase family; nitroreductase complement(2647026..2647592) Clostridium clariflavum DSM 19732 11562722 YP_005046818.1 CDS Clocl_2307 NC_016627.1 2647624 2649336 R PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB complement(2647624..2649336) Clostridium clariflavum DSM 19732 11562723 YP_005046819.1 CDS Clocl_2308 NC_016627.1 2649710 2650516 R hypothetical protein complement(2649710..2650516) Clostridium clariflavum DSM 19732 11562724 YP_005046820.1 CDS Clocl_2309 NC_016627.1 2650897 2651694 D PFAM: Prolyl oligopeptidase family; prolyl oligopeptidase family protein 2650897..2651694 Clostridium clariflavum DSM 19732 11562725 YP_005046821.1 CDS Clocl_2310 NC_016627.1 2651715 2651984 D PFAM: Uncharacterized protein conserved in bacteria (DUF2325); hypothetical protein 2651715..2651984 Clostridium clariflavum DSM 19732 11562726 YP_005046822.1 CDS Clocl_2311 NC_016627.1 2652270 2653487 R PFAM: Transposase, Mutator family; transposase complement(2652270..2653487) Clostridium clariflavum DSM 19732 11562727 YP_005046823.1 CDS Clocl_2312 NC_016627.1 2653625 2653909 R hypothetical protein complement(2653625..2653909) Clostridium clariflavum DSM 19732 11562728 YP_005046824.1 CDS Clocl_2313 NC_016627.1 2653906 2655510 R PFAM: Transposase IS66 family; transposase complement(2653906..2655510) Clostridium clariflavum DSM 19732 11562729 YP_005046825.1 CDS Clocl_2314 NC_016627.1 2656063 2656833 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(2656063..2656833) Clostridium clariflavum DSM 19732 11562730 YP_005046826.1 CDS Clocl_2315 NC_016627.1 2656850 2658316 R PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; transposase complement(2656850..2658316) Clostridium clariflavum DSM 19732 11562731 YP_005046827.1 CDS Clocl_2316 NC_016627.1 2658419 2658655 R PFAM: IS66 Orf2 like protein; transposase complement(2658419..2658655) Clostridium clariflavum DSM 19732 11562732 YP_005046828.1 CDS Clocl_2317 NC_016627.1 2658652 2659005 R PFAM: Transposase; Transposase complement(2658652..2659005) Clostridium clariflavum DSM 19732 11562733 YP_005046829.1 CDS Clocl_2318 NC_016627.1 2659321 2659803 R hypothetical protein complement(2659321..2659803) Clostridium clariflavum DSM 19732 11562734 YP_005046830.1 CDS Clocl_2319 NC_016627.1 2659821 2660036 R hypothetical protein complement(2659821..2660036) Clostridium clariflavum DSM 19732 11562735 YP_005046831.1 CDS Clocl_2320 NC_016627.1 2660393 2661673 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; manually curated; transposase complement(2660393..2661673) Clostridium clariflavum DSM 19732 11562736 YP_005046832.1 CDS Clocl_2321 NC_016627.1 2661983 2662438 R PFAM: Transposase IS200 like; transposase complement(2661983..2662438) Clostridium clariflavum DSM 19732 11562737 YP_005046833.1 CDS Clocl_2322 NC_016627.1 2662845 2663114 D PFAM: HSP20-like domain of unknown function (DUF1813); hypothetical protein 2662845..2663114 Clostridium clariflavum DSM 19732 11562738 YP_005046834.1 CDS Clocl_2324 NC_016627.1 2663752 2663958 D hypothetical protein 2663752..2663958 Clostridium clariflavum DSM 19732 11562740 YP_005046835.1 CDS Clocl_2325 NC_016627.1 2664096 2664401 R hypothetical protein complement(2664096..2664401) Clostridium clariflavum DSM 19732 11562741 YP_005046836.1 CDS Clocl_2327 NC_016627.1 2666913 2667689 R hypothetical protein complement(2666913..2667689) Clostridium clariflavum DSM 19732 11562743 YP_005046837.1 CDS Clocl_2328 NC_016627.1 2667918 2669526 R PFAM: Transposase IS66 family; manually curated; transposase complement(join(2667918..2668574,2668576..2669526)) Clostridium clariflavum DSM 19732 11562744 YP_005046838.1 CDS Clocl_2329 NC_016627.1 2669591 2669944 R PFAM: IS66 Orf2 like protein; transposase complement(2669591..2669944) Clostridium clariflavum DSM 19732 11562745 YP_005046839.1 CDS Clocl_2330 NC_016627.1 2670250 2670534 R hypothetical protein complement(2670250..2670534) Clostridium clariflavum DSM 19732 11562746 YP_005046840.1 CDS Clocl_2331 NC_016627.1 2670531 2672135 R PFAM: Transposase IS66 family; transposase complement(2670531..2672135) Clostridium clariflavum DSM 19732 11562747 YP_005046841.1 CDS Clocl_2332 NC_016627.1 2672200 2672553 R PFAM: IS66 Orf2 like protein; transposase complement(2672200..2672553) Clostridium clariflavum DSM 19732 11562748 YP_005046842.1 CDS Clocl_2333 NC_016627.1 2672550 2672903 R PFAM: Transposase; Transposase complement(2672550..2672903) Clostridium clariflavum DSM 19732 11562749 YP_005046843.1 CDS Clocl_2334 NC_016627.1 2672973 2673128 R hypothetical protein complement(2672973..2673128) Clostridium clariflavum DSM 19732 11562750 YP_005046844.1 CDS Clocl_2335 NC_016627.1 2673376 2673762 R hypothetical protein complement(2673376..2673762) Clostridium clariflavum DSM 19732 11562751 YP_005046845.1 CDS Clocl_2337 NC_016627.1 2679414 2679575 R hypothetical protein complement(2679414..2679575) Clostridium clariflavum DSM 19732 11562753 YP_005046846.1 CDS Clocl_2338 NC_016627.1 2679593 2679697 R hypothetical protein complement(2679593..2679697) Clostridium clariflavum DSM 19732 11562754 YP_005046847.1 CDS Clocl_2340 NC_016627.1 2681363 2681716 R PFAM: IS66 Orf2 like protein; transposase complement(2681363..2681716) Clostridium clariflavum DSM 19732 11562756 YP_005046848.1 CDS Clocl_2341 NC_016627.1 2681783 2682067 R PFAM: Transposase; Transposase complement(2681783..2682067) Clostridium clariflavum DSM 19732 11562757 YP_005046849.1 CDS Clocl_2342 NC_016627.1 2682204 2682599 R hypothetical protein complement(2682204..2682599) Clostridium clariflavum DSM 19732 11562758 YP_005046850.1 CDS Clocl_2343 NC_016627.1 2682601 2683362 R PFAM: Protein of unknown function (DUF1557); hypothetical protein complement(2682601..2683362) Clostridium clariflavum DSM 19732 11562759 YP_005046851.1 CDS Clocl_2344 NC_016627.1 2683325 2684650 R TIGRFAM: intein N-terminal splicing region; RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(2683325..2684650) Clostridium clariflavum DSM 19732 11562760 YP_005046852.1 CDS Clocl_2345 NC_016627.1 2685070 2685723 R PFAM: Suppressor of fused protein (SUFU); Suppressor of fused protein (SUFU) complement(2685070..2685723) Clostridium clariflavum DSM 19732 11562761 YP_005046853.1 CDS Clocl_2346 NC_016627.1 2685921 2687311 R PFAM: Transposase DDE domain; manually curated; transposase family protein complement(join(2685921..2686511,2686511..2687311)) Clostridium clariflavum DSM 19732 11562762 YP_005046854.1 CDS Clocl_2347 NC_016627.1 2687487 2687975 R hypothetical protein complement(2687487..2687975) Clostridium clariflavum DSM 19732 11562763 YP_005046855.1 CDS Clocl_2348 NC_016627.1 2688386 2688520 R hypothetical protein complement(2688386..2688520) Clostridium clariflavum DSM 19732 11562764 YP_005046856.1 CDS Clocl_2349 NC_016627.1 2688517 2690124 R PFAM: Transposase IS66 family; transposase complement(2688517..2690124) Clostridium clariflavum DSM 19732 11562765 YP_005046857.1 CDS Clocl_2350 NC_016627.1 2690189 2690542 R PFAM: IS66 Orf2 like protein; transposase complement(2690189..2690542) Clostridium clariflavum DSM 19732 11562766 YP_005046858.1 CDS Clocl_2351 NC_016627.1 2690539 2690892 R PFAM: Transposase; Transposase complement(2690539..2690892) Clostridium clariflavum DSM 19732 11562767 YP_005046859.1 CDS Clocl_2352 NC_016627.1 2691262 2691603 R hypothetical protein complement(2691262..2691603) Clostridium clariflavum DSM 19732 11562768 YP_005046860.1 CDS Clocl_2353 NC_016627.1 2691614 2693710 R PFAM: Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; intein N-terminal splicing region; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(2691614..2693710) Clostridium clariflavum DSM 19732 11562769 YP_005046861.1 CDS Clocl_2354 NC_016627.1 2693827 2701137 R PFAM: Bacterial Ig-like domain (group 2); RHS Repeat; Dockerin type I repeat; Bacterial SH3 domain; TIGRFAM: YD repeat (two copies); Rhs family protein complement(2693827..2701137) Clostridium clariflavum DSM 19732 11562770 YP_005046862.1 CDS Clocl_2355 NC_016627.1 2701545 2701760 D PFAM: Transposase, Mutator family; Transposase, Mutator family 2701545..2701760 Clostridium clariflavum DSM 19732 11562771 YP_005046863.1 CDS Clocl_2356 NC_016627.1 2701818 2702234 R PFAM: SMI1 / KNR4 family; putative glucan synthasis protein complement(2701818..2702234) Clostridium clariflavum DSM 19732 11562772 YP_005046864.1 CDS Clocl_2360 NC_016627.1 2705239 2706732 R PFAM: Integrase core domain; transposase complement(2705239..2706732) Clostridium clariflavum DSM 19732 11562776 YP_005046865.1 CDS Clocl_2361 NC_016627.1 2707361 2708869 R hypothetical protein complement(2707361..2708869) Clostridium clariflavum DSM 19732 11562777 YP_005046866.1 CDS Clocl_2362 NC_016627.1 2708883 2709407 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(2708883..2709407) Clostridium clariflavum DSM 19732 11562778 YP_005046867.1 CDS Clocl_2363 NC_016627.1 2709539 2710069 R PFAM: S-layer homology domain; putative S-layer protein complement(2709539..2710069) Clostridium clariflavum DSM 19732 11562779 YP_005046868.1 CDS Clocl_2364 NC_016627.1 2710129 2711076 R hypothetical protein complement(2710129..2711076) Clostridium clariflavum DSM 19732 11562780 YP_005046869.1 CDS Clocl_2366 NC_016627.1 2712034 2712792 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(2712034..2712792) Clostridium clariflavum DSM 19732 11562782 YP_005046870.1 CDS Clocl_2367 NC_016627.1 2712770 2714335 R PFAM: Integrase core domain; transposase complement(2712770..2714335) Clostridium clariflavum DSM 19732 11562783 YP_005046871.1 CDS Clocl_2368 NC_016627.1 2714634 2714780 R hypothetical protein complement(2714634..2714780) Clostridium clariflavum DSM 19732 11562784 YP_005046872.1 CDS Clocl_2371 NC_016627.1 2715869 2716084 R hypothetical protein complement(2715869..2716084) Clostridium clariflavum DSM 19732 11562787 YP_005046873.1 CDS Clocl_2372 NC_016627.1 2716927 2717187 R PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein complement(2716927..2717187) Clostridium clariflavum DSM 19732 11562788 YP_005046874.1 CDS Clocl_2373 NC_016627.1 2717499 2717915 R manually curated; hypothetical protein complement(2717499..2717915) Clostridium clariflavum DSM 19732 11562789 YP_005046875.1 CDS Clocl_2374 NC_016627.1 2718096 2719106 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; TIGR01210 family protein; histone acetyltransferase complement(2718096..2719106) Clostridium clariflavum DSM 19732 11562790 YP_005046876.1 CDS Clocl_2375 NC_016627.1 2719153 2719860 R PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial; ribonuclease III complement(2719153..2719860) Clostridium clariflavum DSM 19732 11562791 YP_005046877.1 CDS Clocl_2376 NC_016627.1 2720110 2721348 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; beta-ketoacyl-acyl-carrier-protein synthase II complement(2720110..2721348) Clostridium clariflavum DSM 19732 11562792 YP_005046878.1 CDS Clocl_2377 NC_016627.1 2721515 2721739 R PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein complement(2721515..2721739) Clostridium clariflavum DSM 19732 11562793 YP_005046879.1 CDS Clocl_2378 NC_016627.1 2721835 2722578 R PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(2721835..2722578) Clostridium clariflavum DSM 19732 11562794 YP_005046880.1 CDS Clocl_2379 NC_016627.1 2722717 2723652 R PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(2722717..2723652) Clostridium clariflavum DSM 19732 11562795 YP_005046881.1 CDS Clocl_2380 NC_016627.1 2723678 2724673 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2723678..2724673) Clostridium clariflavum DSM 19732 11562796 YP_005046882.1 CDS Clocl_2381 NC_016627.1 2724663 2725676 R PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX complement(2724663..2725676) Clostridium clariflavum DSM 19732 11562797 YP_005046883.1 CDS Clocl_2382 NC_016627.1 2725745 2726389 R PFAM: DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator complement(2725745..2726389) Clostridium clariflavum DSM 19732 11562798 YP_005046884.1 CDS Clocl_2383 NC_016627.1 2726574 2727191 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2726574..2727191) Clostridium clariflavum DSM 19732 11562799 YP_005046885.1 CDS Clocl_2384 NC_016627.1 2727175 2728533 R PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; 30S ribosomal protein S12 complement(2727175..2728533) Clostridium clariflavum DSM 19732 11562800 YP_005046886.1 CDS Clocl_2385 NC_016627.1 2728715 2728963 R hypothetical protein complement(2728715..2728963) Clostridium clariflavum DSM 19732 11562801 YP_005046887.1 CDS Clocl_2386 NC_016627.1 2728963 2730414 R PFAM: Rad50 zinc hook motif; Rad50 zinc hook motif protein complement(2728963..2730414) Clostridium clariflavum DSM 19732 11562802 YP_005046888.1 CDS Clocl_2387 NC_016627.1 2730411 2731400 R PFAM: Calcineurin-like phosphoesterase; DNA repair exonuclease complement(2730411..2731400) Clostridium clariflavum DSM 19732 11562803 YP_005046889.1 CDS Clocl_2388 NC_016627.1 2731407 2732099 R PFAM: Phosphoglycerate mutase family; fructose-2,6-bisphosphatase complement(2731407..2732099) Clostridium clariflavum DSM 19732 11562804 YP_005046890.1 CDS Clocl_2389 NC_016627.1 2732128 2733051 R PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; dihydroorotate dehydrogenase family protein complement(2732128..2733051) Clostridium clariflavum DSM 19732 11562805 YP_005046891.1 CDS Clocl_2390 NC_016627.1 2733044 2733829 R PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; 2-polyprenylphenol 6-hydroxylase complement(2733044..2733829) Clostridium clariflavum DSM 19732 11562806 YP_005046892.1 CDS Clocl_2391 NC_016627.1 2733958 2737173 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(2733958..2737173) Clostridium clariflavum DSM 19732 11562807 YP_005046893.1 CDS Clocl_2392 NC_016627.1 2737316 2738389 R PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(2737316..2738389) Clostridium clariflavum DSM 19732 11562808 YP_005046894.1 CDS Clocl_2393 NC_016627.1 2738423 2739361 R PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; orotidine 5''-phosphate decarboxylase complement(2738423..2739361) Clostridium clariflavum DSM 19732 11562809 YP_005046895.1 CDS Clocl_2394 NC_016627.1 2739449 2740735 R PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase complement(2739449..2740735) Clostridium clariflavum DSM 19732 11562810 YP_005046896.1 CDS Clocl_2395 NC_016627.1 2740719 2741657 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(2740719..2741657) Clostridium clariflavum DSM 19732 11562811 YP_005046897.1 CDS Clocl_2396 NC_016627.1 2741771 2741947 R hypothetical protein complement(2741771..2741947) Clostridium clariflavum DSM 19732 11562812 YP_005046898.1 CDS Clocl_2397 NC_016627.1 2742020 2742574 R PFAM: Phosphoribosyl transferase domain; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase complement(2742020..2742574) Clostridium clariflavum DSM 19732 11562813 YP_005046899.1 CDS Clocl_2398 NC_016627.1 2742853 2743287 R TIGRFAM: putative membrane protein, TIGR04086 family; integral membrane protein, TIGR04097 family; hypothetical protein complement(2742853..2743287) Clostridium clariflavum DSM 19732 11562814 YP_005046900.1 CDS Clocl_2399 NC_016627.1 2743380 2743547 R hypothetical protein complement(2743380..2743547) Clostridium clariflavum DSM 19732 11562815 YP_005046901.1 CDS Clocl_2400 NC_016627.1 2743733 2745883 D PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 2743733..2745883 Clostridium clariflavum DSM 19732 11562816 YP_005046902.1 CDS Clocl_2401 NC_016627.1 2746058 2746525 D hypothetical protein 2746058..2746525 Clostridium clariflavum DSM 19732 11562817 YP_005046903.1 CDS Clocl_2402 NC_016627.1 2746611 2746898 R PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(2746611..2746898) Clostridium clariflavum DSM 19732 11562818 YP_005046904.1 CDS Clocl_2403 NC_016627.1 2746928 2748046 R PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase complement(2746928..2748046) Clostridium clariflavum DSM 19732 11562819 YP_005046905.1 CDS Clocl_2404 NC_016627.1 2748103 2749128 R PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(2748103..2749128) Clostridium clariflavum DSM 19732 11562820 YP_005046906.1 CDS Clocl_2405 NC_016627.1 2749436 2751073 R PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; SpoIID/LytB domain-containing protein complement(2749436..2751073) Clostridium clariflavum DSM 19732 11562821 YP_005046907.1 CDS Clocl_2406 NC_016627.1 2751697 2752578 D PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 2751697..2752578 Clostridium clariflavum DSM 19732 11562822 YP_005046908.1 CDS Clocl_2407 NC_016627.1 2752645 2753409 D PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 2752645..2753409 Clostridium clariflavum DSM 19732 11562823 YP_005046909.1 CDS Clocl_2408 NC_016627.1 2753560 2754033 D PFAM: ACT domain; aspartokinase 2753560..2754033 Clostridium clariflavum DSM 19732 11562824 YP_005046910.1 CDS Clocl_2409 NC_016627.1 2754086 2754616 R PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; ATP:corrinoid adenosyltransferase complement(2754086..2754616) Clostridium clariflavum DSM 19732 11562825 YP_005046911.1 CDS Clocl_2411 NC_016627.1 2755068 2755796 R PFAM: Sir2 family; NAD-dependent protein deacetylase, SIR2 family complement(2755068..2755796) Clostridium clariflavum DSM 19732 11562827 YP_005046912.1 CDS Clocl_2412 NC_016627.1 2755853 2756248 R PFAM: Protein of unknown function (DUF1696); hypothetical protein complement(2755853..2756248) Clostridium clariflavum DSM 19732 11562828 YP_005046913.1 CDS Clocl_2413 NC_016627.1 2756494 2758119 R PFAM: ABC transporter; ABC transporter ATPase complement(2756494..2758119) Clostridium clariflavum DSM 19732 11562829 YP_005046914.1 CDS Clocl_2415 NC_016627.1 2760652 2761868 R PFAM: Transposase, Mutator family; manually curated; transposase complement(join(2760652..2761656,2761656..2761868)) Clostridium clariflavum DSM 19732 11562831 YP_005046915.1 CDS Clocl_2416 NC_016627.1 2762692 2763837 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(2762692..2763837) Clostridium clariflavum DSM 19732 11562832 YP_005046916.1 CDS Clocl_2417 NC_016627.1 2764264 2765004 D hypothetical protein 2764264..2765004 Clostridium clariflavum DSM 19732 11562833 YP_005046917.1 CDS Clocl_2418 NC_016627.1 2765153 2766856 D PFAM: von Willebrand factor type A domain; manually curated; hypothetical protein 2765153..2766856 Clostridium clariflavum DSM 19732 11562834 YP_005046918.1 CDS Clocl_2419 NC_016627.1 2767208 2767576 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine enolpyruvyl transferase complement(2767208..2767576) Clostridium clariflavum DSM 19732 11562835 YP_005046919.1 CDS Clocl_2420 NC_016627.1 2767990 2769087 R PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(2767990..2769087) Clostridium clariflavum DSM 19732 11562836 YP_005046920.1 CDS Clocl_2421 NC_016627.1 2769100 2770245 R PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW; manually curated; cell division protein FtsW complement(2769100..2770245) Clostridium clariflavum DSM 19732 11562837 YP_005046921.1 CDS Clocl_2422 NC_016627.1 2770312 2771304 R PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; Phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2770312..2771304) Clostridium clariflavum DSM 19732 11562838 YP_005046922.1 CDS Clocl_2423 NC_016627.1 2771379 2772761 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(2771379..2772761) Clostridium clariflavum DSM 19732 11562839 YP_005046923.1 CDS Clocl_2424 NC_016627.1 2772812 2774266 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase complement(2772812..2774266) Clostridium clariflavum DSM 19732 11562840 YP_005046924.1 CDS Clocl_2425 NC_016627.1 2774348 2776540 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D; manually curated; cell division protein FtsI/penicillin-binding protein 2 complement(2774348..2776540) Clostridium clariflavum DSM 19732 11562841 YP_005046925.1 CDS Clocl_2426 NC_016627.1 2776892 2777383 R PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; Cell division protein FtsL complement(2776892..2777383) Clostridium clariflavum DSM 19732 11562842 YP_005046926.1 CDS Clocl_2427 NC_016627.1 2777936 2778877 R PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(2777936..2778877) Clostridium clariflavum DSM 19732 11562843 YP_005046927.1 CDS Clocl_2428 NC_016627.1 2778940 2779371 R PFAM: MraZ protein; TIGRFAM: mraZ protein; mraZ protein complement(2778940..2779371) Clostridium clariflavum DSM 19732 11562844 YP_005046928.1 CDS Clocl_2429 NC_016627.1 2779569 2780702 R PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; rod shape-determining protein RodA complement(2779569..2780702) Clostridium clariflavum DSM 19732 11562845 YP_005046929.1 CDS Clocl_2430 NC_016627.1 2780990 2781172 R hypothetical protein complement(2780990..2781172) Clostridium clariflavum DSM 19732 11562846 YP_005046930.1 CDS Clocl_2431 NC_016627.1 2781360 2782343 R PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(2781360..2782343) Clostridium clariflavum DSM 19732 11562847 YP_005046931.1 CDS Clocl_2432 NC_016627.1 2782356 2783639 R PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); putative Zn-dependent peptidase complement(2782356..2783639) Clostridium clariflavum DSM 19732 11562848 YP_005046932.1 CDS Clocl_2433 NC_016627.1 2783769 2785058 R PFAM: Peptidase M16 inactive domain; putative Zn-dependent peptidase complement(2783769..2785058) Clostridium clariflavum DSM 19732 11562849 YP_005046933.1 CDS Clocl_2434 NC_016627.1 2785564 2787237 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated; diguanylate cyclase domain-containing protein complement(2785564..2787237) Clostridium clariflavum DSM 19732 11562850 YP_005046934.1 CDS Clocl_2435 NC_016627.1 2787659 2793643 R PFAM: Bacterial Ig-like domain (group 2); Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); beta-1,4-xylanase complement(2787659..2793643) Clostridium clariflavum DSM 19732 11562851 YP_005046935.1 CDS Clocl_2436 NC_016627.1 2794217 2795221 R PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator complement(2794217..2795221) Clostridium clariflavum DSM 19732 11562852 YP_005046936.1 CDS Clocl_2437 NC_016627.1 2795742 2797385 R PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 43; beta-xylosidase complement(2795742..2797385) Clostridium clariflavum DSM 19732 11562853 YP_005046937.1 CDS Clocl_2438 NC_016627.1 2797716 2798654 R PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; lysophospholipase L1-like esterase complement(2797716..2798654) Clostridium clariflavum DSM 19732 11562854 YP_005046938.1 CDS Clocl_2439 NC_016627.1 2798730 2799434 R PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; ribulose-5-phosphate 4-epimerase-like epimerase or aldolase complement(2798730..2799434) Clostridium clariflavum DSM 19732 11562855 YP_005046939.1 CDS Clocl_2440 NC_016627.1 2799453 2801048 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; pentulose/hexulose kinase complement(2799453..2801048) Clostridium clariflavum DSM 19732 11562856 YP_005046940.1 CDS Clocl_2441 NC_016627.1 2801372 2803759 R PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; beta-1,4-xylanase complement(2801372..2803759) Clostridium clariflavum DSM 19732 11562857 YP_005046941.1 CDS Clocl_2442 NC_016627.1 2804133 2805557 R PFAM: Glycosyl hydrolases family 43; beta-xylosidase complement(2804133..2805557) Clostridium clariflavum DSM 19732 11562858 YP_005046942.1 CDS Clocl_2443 NC_016627.1 2805633 2807141 R PFAM: Glycosyl hydrolases family 39; beta-xylosidase complement(2805633..2807141) Clostridium clariflavum DSM 19732 11562859 YP_005046943.1 CDS Clocl_2444 NC_016627.1 2807205 2807489 R hypothetical protein complement(2807205..2807489) Clostridium clariflavum DSM 19732 11562860 YP_005046944.1 CDS Clocl_2445 NC_016627.1 2807554 2809035 R PFAM: Alpha-L-arabinofuranosidase C-terminus; alpha-L-arabinofuranosidase complement(2807554..2809035) Clostridium clariflavum DSM 19732 11562861 YP_005046945.1 CDS Clocl_2446 NC_016627.1 2809204 2810367 R PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C complement(2809204..2810367) Clostridium clariflavum DSM 19732 11562862 YP_005046946.1 CDS Clocl_2447 NC_016627.1 2811117 2812616 R PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Putative esterase; enterochelin esterase-like enzyme complement(2811117..2812616) Clostridium clariflavum DSM 19732 11562863 YP_005046947.1 CDS Clocl_2448 NC_016627.1 2812897 2813073 D hypothetical protein 2812897..2813073 Clostridium clariflavum DSM 19732 11562864 YP_005046948.1 CDS Clocl_2449 NC_016627.1 2813102 2814037 R PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin kinase/FMN adenylyltransferase complement(2813102..2814037) Clostridium clariflavum DSM 19732 11562865 YP_005046949.1 CDS Clocl_2450 NC_016627.1 2814166 2815053 R PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B complement(2814166..2815053) Clostridium clariflavum DSM 19732 11562866 YP_005046950.1 CDS Clocl_2451 NC_016627.1 2815056 2816012 R PFAM: DHHA1 domain; DHH family; exopolyphosphatase-like protein complement(2815056..2816012) Clostridium clariflavum DSM 19732 11562867 YP_005046951.1 CDS Clocl_2452 NC_016627.1 2816200 2816547 R PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A complement(2816200..2816547) Clostridium clariflavum DSM 19732 11562868 YP_005046952.1 CDS Clocl_2453 NC_016627.1 2816576 2819650 R PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; manually curated; translation initiation factor IF-2 complement(2816576..2819650) Clostridium clariflavum DSM 19732 11562869 YP_005046953.1 CDS Clocl_2454 NC_016627.1 2819673 2820017 R PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; ribosomal protein HS6-type (S12/L30/L7a) complement(2819673..2820017) Clostridium clariflavum DSM 19732 11562870 YP_005046954.1 CDS Clocl_2455 NC_016627.1 2820007 2820282 R PFAM: Protein of unknown function (DUF448); manually curated; putative nucleic-acid-binding protein implicated in transcription termination complement(2820007..2820282) Clostridium clariflavum DSM 19732 11562871 YP_005046955.1 CDS Clocl_2456 NC_016627.1 2820438 2821571 R PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA complement(2820438..2821571) Clostridium clariflavum DSM 19732 11562872 YP_005046956.1 CDS Clocl_2457 NC_016627.1 2821628 2822089 R PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein complement(2821628..2822089) Clostridium clariflavum DSM 19732 11562873 YP_005046957.1 CDS Clocl_2458 NC_016627.1 2822345 2823409 R PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase complement(2822345..2823409) Clostridium clariflavum DSM 19732 11562874 YP_005046958.1 CDS Clocl_2459 NC_016627.1 2823448 2824740 R PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; RIP metalloprotease RseP complement(2823448..2824740) Clostridium clariflavum DSM 19732 11562875 YP_005046959.1 CDS Clocl_2460 NC_016627.1 2824996 2826141 R PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2824996..2826141) Clostridium clariflavum DSM 19732 11562876 YP_005046960.1 CDS Clocl_2461 NC_016627.1 2826180 2827019 R PFAM: Cytidylyltransferase family; manually curated; CDP-diglyceride synthetase complement(2826180..2827019) Clostridium clariflavum DSM 19732 11562877 YP_005046961.1 CDS Clocl_2462 NC_016627.1 2827021 2827785 R PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl diphosphate synthase complement(2827021..2827785) Clostridium clariflavum DSM 19732 11562878 YP_005046962.1 CDS Clocl_2463 NC_016627.1 2827939 2828139 R hypothetical protein complement(2827939..2828139) Clostridium clariflavum DSM 19732 11562879 YP_005046963.1 CDS Clocl_2464 NC_016627.1 2828141 2828698 R PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor complement(2828141..2828698) Clostridium clariflavum DSM 19732 11562880 YP_005046964.1 CDS Clocl_2465 NC_016627.1 2828844 2829551 R PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase complement(2828844..2829551) Clostridium clariflavum DSM 19732 11562881 YP_005046965.1 CDS Clocl_2466 NC_016627.1 2829699 2830346 R PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts complement(2829699..2830346) Clostridium clariflavum DSM 19732 11562882 YP_005046966.1 CDS Clocl_2467 NC_016627.1 2830539 2831297 R PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 complement(2830539..2831297) Clostridium clariflavum DSM 19732 11562883 YP_005046967.1 CDS Clocl_2468 NC_016627.1 2831705 2833525 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA 2831705..2833525 Clostridium clariflavum DSM 19732 11562884 YP_005046968.1 CDS Clocl_2469 NC_016627.1 2833717 2834850 D PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; hypothetical protein 2833717..2834850 Clostridium clariflavum DSM 19732 11562885 YP_005046969.1 CDS Clocl_2470 NC_016627.1 2834948 2835586 D PFAM: O-methyltransferase; putative O-methyltransferase 2834948..2835586 Clostridium clariflavum DSM 19732 11562886 YP_005046970.1 CDS Clocl_2471 NC_016627.1 2835601 2836821 D PFAM: Peptidase family U32; collagenase-like protease 2835601..2836821 Clostridium clariflavum DSM 19732 11562887 YP_005046971.1 CDS Clocl_2472 NC_016627.1 2837028 2838683 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI/penicillin-binding protein 2 2837028..2838683 Clostridium clariflavum DSM 19732 11562888 YP_005046972.1 CDS Clocl_2473 NC_016627.1 2839002 2839541 R manually curated; hypothetical protein complement(2839002..2839541) Clostridium clariflavum DSM 19732 11562889 YP_005046973.1 CDS Clocl_2474 NC_016627.1 2839836 2840549 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-K factor; RNA polymerase sigma-27/28 subunit RpsK/SigK 2839836..2840549 Clostridium clariflavum DSM 19732 11562890 YP_005046974.1 CDS Clocl_2475 NC_016627.1 2840558 2841643 R PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI; sporulation integral membrane protein YtvI complement(2840558..2841643) Clostridium clariflavum DSM 19732 11562891 YP_005046975.1 CDS Clocl_2476 NC_016627.1 2841996 2842718 R PFAM: Tryptophan synthase alpha chain; tryptophan synthase alpha chain complement(2841996..2842718) Clostridium clariflavum DSM 19732 11562892 YP_005046976.1 CDS Clocl_2477 NC_016627.1 2842810 2843964 R PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(2842810..2843964) Clostridium clariflavum DSM 19732 11562893 YP_005046977.1 CDS Clocl_2478 NC_016627.1 2843968 2844762 R PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family; membrane complex biogenesis protein, BtpA family complement(2843968..2844762) Clostridium clariflavum DSM 19732 11562894 YP_005046978.1 CDS Clocl_2479 NC_016627.1 2844755 2845516 R PFAM: Phosphorylase superfamily; uridine phosphorylase complement(2844755..2845516) Clostridium clariflavum DSM 19732 11562895 YP_005046979.1 CDS Clocl_2480 NC_016627.1 2845518 2846474 R PFAM: pfkB family carbohydrate kinase; sugar kinase complement(2845518..2846474) Clostridium clariflavum DSM 19732 11562896 YP_005046980.1 CDS Clocl_2481 NC_016627.1 2846471 2847043 R PFAM: Isochorismatase family; nicotinamidase-like amidase complement(2846471..2847043) Clostridium clariflavum DSM 19732 11562897 YP_005046981.1 CDS Clocl_2482 NC_016627.1 2847036 2847953 R PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease complement(2847036..2847953) Clostridium clariflavum DSM 19732 11562898 YP_005046982.1 CDS Clocl_2483 NC_016627.1 2847975 2849063 R PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease complement(2847975..2849063) Clostridium clariflavum DSM 19732 11562899 YP_005046983.1 CDS Clocl_2484 NC_016627.1 2849084 2850628 R PFAM: ABC transporter; ABC transporter ATPase complement(2849084..2850628) Clostridium clariflavum DSM 19732 11562900 YP_005046984.1 CDS Clocl_2485 NC_016627.1 2850659 2851834 R PFAM: Basic membrane protein; putative ABC-type transport system, periplasmic component/surface lipoprotein complement(2850659..2851834) Clostridium clariflavum DSM 19732 11562901 YP_005046985.1 CDS Clocl_2486 NC_016627.1 2852035 2852751 R PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator complement(2852035..2852751) Clostridium clariflavum DSM 19732 11562902 YP_005046986.1 CDS Clocl_2487 NC_016627.1 2853292 2853756 R flavodoxin complement(2853292..2853756) Clostridium clariflavum DSM 19732 11562903 YP_005046987.1 CDS Clocl_2488 NC_016627.1 2854375 2855634 D PFAM: Dockerin type I repeat; dockerin-like protein 2854375..2855634 Clostridium clariflavum DSM 19732 11562904 YP_005046988.1 CDS Clocl_2489 NC_016627.1 2855833 2856237 D PFAM: Dockerin type I repeat; dockerin-like protein 2855833..2856237 Clostridium clariflavum DSM 19732 11562905 YP_005046989.1 CDS Clocl_2492 NC_016627.1 2858399 2858650 R hypothetical protein complement(2858399..2858650) Clostridium clariflavum DSM 19732 11562908 YP_005046990.1 CDS Clocl_2493 NC_016627.1 2858837 2859043 R hypothetical protein complement(2858837..2859043) Clostridium clariflavum DSM 19732 11562909 YP_005046991.1 CDS Clocl_2495 NC_016627.1 2860785 2862002 R PFAM: Transposase, Mutator family; transposase complement(2860785..2862002) Clostridium clariflavum DSM 19732 11562911 YP_005046992.1 CDS Clocl_2497 NC_016627.1 2864644 2865120 R hypothetical protein complement(2864644..2865120) Clostridium clariflavum DSM 19732 11562913 YP_005046993.1 CDS Clocl_2498 NC_016627.1 2865128 2867833 R TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(2865128..2867833) Clostridium clariflavum DSM 19732 11562914 YP_005046994.1 CDS Clocl_2499 NC_016627.1 2867882 2868277 R hypothetical protein complement(2867882..2868277) Clostridium clariflavum DSM 19732 11562915 YP_005046995.1 CDS Clocl_2500 NC_016627.1 2868463 2869806 D PFAM: Transposase domain (DUF772); hypothetical protein 2868463..2869806 Clostridium clariflavum DSM 19732 11562916 YP_005046996.1 CDS Clocl_2501 NC_016627.1 2870041 2870940 R PFAM: Integrase core domain; transposase complement(2870041..2870940) Clostridium clariflavum DSM 19732 11562917 YP_005046997.1 CDS Clocl_2502 NC_016627.1 2870900 2871193 R PFAM: Transposase; transposase complement(2870900..2871193) Clostridium clariflavum DSM 19732 11562918 YP_005046998.1 CDS Clocl_2504 NC_016627.1 2872349 2873059 R hypothetical protein complement(2872349..2873059) Clostridium clariflavum DSM 19732 11562920 YP_005046999.1 CDS Clocl_2505 NC_016627.1 2873094 2885216 R PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(2873094..2885216) Clostridium clariflavum DSM 19732 11562921 YP_005047000.1 CDS Clocl_2506 NC_016627.1 2885510 2887891 R PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; manually curated; MutS2 family protein complement(2885510..2887891) Clostridium clariflavum DSM 19732 11562922 YP_005047001.1 CDS Clocl_2507 NC_016627.1 2888213 2888425 D hypothetical protein 2888213..2888425 Clostridium clariflavum DSM 19732 11562923 YP_005047002.1 CDS Clocl_2508 NC_016627.1 2888618 2889688 R PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(2888618..2889688) Clostridium clariflavum DSM 19732 11562924 YP_005047003.1 CDS Clocl_2509 NC_016627.1 2889878 2890183 R manually curated; hypothetical protein complement(2889878..2890183) Clostridium clariflavum DSM 19732 11562925 YP_005047004.1 CDS Clocl_2510 NC_016627.1 2890436 2891812 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(2890436..2891812) Clostridium clariflavum DSM 19732 11562926 YP_005047005.1 CDS Clocl_2511 NC_016627.1 2892244 2892849 R hypothetical protein complement(2892244..2892849) Clostridium clariflavum DSM 19732 11562927 YP_005047006.1 CDS Clocl_2512 NC_016627.1 2893183 2893689 D hypothetical protein 2893183..2893689 Clostridium clariflavum DSM 19732 11562928 YP_005047007.1 CDS Clocl_2513 NC_016627.1 2893843 2894703 R PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(2893843..2894703) Clostridium clariflavum DSM 19732 11562929 YP_005047008.1 CDS Clocl_2514 NC_016627.1 2894723 2895640 R PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(2894723..2895640) Clostridium clariflavum DSM 19732 11562930 YP_005047009.1 CDS Clocl_2515 NC_016627.1 2895747 2897129 R PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein complement(2895747..2897129) Clostridium clariflavum DSM 19732 11562931 YP_005047010.1 CDS Clocl_2516 NC_016627.1 2898045 2899652 R PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A; stage IV sporulation protein A complement(2898045..2899652) Clostridium clariflavum DSM 19732 11562932 YP_005047011.1 CDS Clocl_2517 NC_016627.1 2899820 2900842 R PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase complement(2899820..2900842) Clostridium clariflavum DSM 19732 11562933 YP_005047012.1 CDS Clocl_2518 NC_016627.1 2900861 2901505 R PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; acyl-phosphate glycerol-3-phosphate acyltransferase complement(2900861..2901505) Clostridium clariflavum DSM 19732 11562934 YP_005047013.1 CDS Clocl_2519 NC_016627.1 2901511 2902833 R PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; ribosome-associated GTPase EngA complement(2901511..2902833) Clostridium clariflavum DSM 19732 11562935 YP_005047014.1 CDS Clocl_2520 NC_016627.1 2902872 2904242 R PFAM: Protein of unknown function (DUF512); PDZ domain (Also known as DHR or GLGF); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase; manually curated; Fe-S oxidoreductase complement(2902872..2904242) Clostridium clariflavum DSM 19732 11562936 YP_005047015.1 CDS Clocl_2521 NC_016627.1 2904453 2904632 R PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 complement(2904453..2904632) Clostridium clariflavum DSM 19732 11562937 YP_005047016.1 CDS Clocl_2522 NC_016627.1 2904691 2905185 R PFAM: Uncharacterized ACR, COG1399; putative metal-binding protein, possibly nucleic-acid binding protein complement(2904691..2905185) Clostridium clariflavum DSM 19732 11562938 YP_005047017.1 CDS Clocl_2523 NC_016627.1 2905972 2907165 R PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase complement(2905972..2907165) Clostridium clariflavum DSM 19732 11562939 YP_005047018.1 CDS Clocl_2524 NC_016627.1 2907251 2908243 R PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphate acetyltransferase complement(2907251..2908243) Clostridium clariflavum DSM 19732 11562940 YP_005047019.1 CDS Clocl_2525 NC_016627.1 2908654 2910084 R PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B complement(2908654..2910084) Clostridium clariflavum DSM 19732 11562941 YP_005047020.1 CDS Clocl_2526 NC_016627.1 2910086 2911555 R PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A complement(2910086..2911555) Clostridium clariflavum DSM 19732 11562942 YP_005047021.1 CDS Clocl_2527 NC_016627.1 2911633 2911920 R PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C complement(2911633..2911920) Clostridium clariflavum DSM 19732 11562943 YP_005047022.1 CDS Clocl_2528 NC_016627.1 2912022 2912870 R PFAM: GlcNAc-PI de-N-acetylase; putative LmbE-like protein complement(2912022..2912870) Clostridium clariflavum DSM 19732 11562944 YP_005047023.1 CDS Clocl_2529 NC_016627.1 2913366 2913917 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2913366..2913917 Clostridium clariflavum DSM 19732 11562945 YP_005047024.1 CDS Clocl_2530 NC_016627.1 2913924 2915417 D hypothetical protein 2913924..2915417 Clostridium clariflavum DSM 19732 11562946 YP_005047025.1 CDS Clocl_2531 NC_016627.1 2915497 2916714 D PFAM: Transposase, Mutator family; transposase 2915497..2916714 Clostridium clariflavum DSM 19732 11562947 YP_005047026.1 CDS Clocl_2532 NC_016627.1 2917041 2919032 R PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; TIGRFAM: DNA ligase, NAD-dependent; NAD-dependent DNA ligase complement(2917041..2919032) Clostridium clariflavum DSM 19732 11562948 YP_005047027.1 CDS Clocl_2533 NC_016627.1 2919086 2919775 R hypothetical protein complement(2919086..2919775) Clostridium clariflavum DSM 19732 11562949 YP_005047028.1 CDS Clocl_2534 NC_016627.1 2919988 2920845 R PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(2919988..2920845) Clostridium clariflavum DSM 19732 11562950 YP_005047029.1 CDS Clocl_2535 NC_016627.1 2921310 2922314 R PFAM: Germination protease; TIGRFAM: GPR endopeptidase; GPR endopeptidase complement(2921310..2922314) Clostridium clariflavum DSM 19732 11562951 YP_005047030.1 CDS Clocl_2536 NC_016627.1 2922448 2922714 D PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 2922448..2922714 Clostridium clariflavum DSM 19732 11562952 YP_005047031.1 CDS Clocl_2537 NC_016627.1 2922863 2923876 R PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta complement(2922863..2923876) Clostridium clariflavum DSM 19732 11562953 YP_005047032.1 CDS Clocl_2538 NC_016627.1 2923866 2926265 R PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; manually curated; DNA internalization-related competence protein ComEC/Rec2 complement(2923866..2926265) Clostridium clariflavum DSM 19732 11562954 YP_005047033.1 CDS Clocl_2539 NC_016627.1 2926379 2927473 R PFAM: NlpC/P60 family; Bacterial SH3 domain; cell wall-associated hydrolase, invasion-associated protein complement(2926379..2927473) Clostridium clariflavum DSM 19732 11562955 YP_005047034.1 CDS Clocl_2540 NC_016627.1 2927775 2928296 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase complement(2927775..2928296) Clostridium clariflavum DSM 19732 11562956 YP_005047035.1 CDS Clocl_2541 NC_016627.1 2928590 2928793 D PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 2928590..2928793 Clostridium clariflavum DSM 19732 11562957 YP_005047036.1 CDS Clocl_2542 NC_016627.1 2929525 2930823 R PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; hydroxymethylpyrimidine synthase complement(2929525..2930823) Clostridium clariflavum DSM 19732 11562958 YP_005047037.1 CDS Clocl_2543 NC_016627.1 2930823 2931470 R PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine-phosphate diphosphorylase complement(2930823..2931470) Clostridium clariflavum DSM 19732 11562959 YP_005047038.1 CDS Clocl_2544 NC_016627.1 2931471 2932088 R PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2; thiamine biosynthesis protein ThiF, family 2 complement(2931471..2932088) Clostridium clariflavum DSM 19732 11562960 YP_005047039.1 CDS Clocl_2545 NC_016627.1 2932101 2933204 R PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH; tyrosine lyase ThiH complement(2932101..2933204) Clostridium clariflavum DSM 19732 11562961 YP_005047040.1 CDS Clocl_2546 NC_016627.1 2933275 2934045 R PFAM: Thiazole biosynthesis protein ThiG; putative enzyme of thiazole biosynthesis complement(2933275..2934045) Clostridium clariflavum DSM 19732 11562962 YP_005047041.1 CDS Clocl_2547 NC_016627.1 2934050 2934250 R PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS complement(2934050..2934250) Clostridium clariflavum DSM 19732 11562963 YP_005047042.1 CDS Clocl_2548 NC_016627.1 2934692 2935273 R PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; ribosome biogenesis GTP-binding protein YsxC/EngB complement(2934692..2935273) Clostridium clariflavum DSM 19732 11562964 YP_005047043.1 CDS Clocl_2549 NC_016627.1 2935447 2936490 R hypothetical protein complement(2935447..2936490) Clostridium clariflavum DSM 19732 11562965 YP_005047044.1 CDS Clocl_2550 NC_016627.1 2936759 2936896 D hypothetical protein 2936759..2936896 Clostridium clariflavum DSM 19732 11562966 YP_005047045.1 CDS Clocl_2551 NC_016627.1 2937251 2937451 D hypothetical protein 2937251..2937451 Clostridium clariflavum DSM 19732 11562967 YP_005047046.1 CDS Clocl_2552 NC_016627.1 2938033 2938326 D hypothetical protein 2938033..2938326 Clostridium clariflavum DSM 19732 11562968 YP_005047047.1 CDS Clocl_2553 NC_016627.1 2938425 2939717 R PFAM: S-layer homology domain; putative S-layer protein complement(2938425..2939717) Clostridium clariflavum DSM 19732 11562969 YP_005047048.1 CDS Clocl_2554 NC_016627.1 2939818 2942079 R PFAM: Bacterial membrane protein YfhO; manually curated; hypothetical protein complement(2939818..2942079) Clostridium clariflavum DSM 19732 11562970 YP_005047049.1 CDS Clocl_2555 NC_016627.1 2942132 2943130 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(2942132..2943130) Clostridium clariflavum DSM 19732 11562971 YP_005047050.1 CDS Clocl_2556 NC_016627.1 2943420 2944145 R PFAM: Protein of unknown function (DUF1113); hypothetical protein complement(2943420..2944145) Clostridium clariflavum DSM 19732 11562972 YP_005047051.1 CDS Clocl_2557 NC_016627.1 2944407 2944988 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(2944407..2944988) Clostridium clariflavum DSM 19732 11562973 YP_005047052.1 CDS Clocl_2559 NC_016627.1 2945337 2945627 R PFAM: Protein of unknown function (DUF503); hypothetical protein complement(2945337..2945627) Clostridium clariflavum DSM 19732 11562975 YP_005047053.1 CDS Clocl_2560 NC_016627.1 2945746 2946906 D PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains 2945746..2946906 Clostridium clariflavum DSM 19732 11562976 YP_005047054.1 CDS Clocl_2561 NC_016627.1 2947214 2948995 D PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); putative RNA-binding protein, snRNP like protein 2947214..2948995 Clostridium clariflavum DSM 19732 11562977 YP_005047055.1 CDS Clocl_2562 NC_016627.1 2949003 2950190 D PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 2949003..2950190 Clostridium clariflavum DSM 19732 11562978 YP_005047056.1 CDS Clocl_2563 NC_016627.1 2950251 2950886 R PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; thiamine diphosphokinase complement(2950251..2950886) Clostridium clariflavum DSM 19732 11562979 YP_005047057.1 CDS Clocl_2564 NC_016627.1 2950904 2951563 R PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase complement(2950904..2951563) Clostridium clariflavum DSM 19732 11562980 YP_005047058.1 CDS Clocl_2565 NC_016627.1 2951682 2952569 R PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A complement(2951682..2952569) Clostridium clariflavum DSM 19732 11562981 YP_005047059.1 CDS Clocl_2566 NC_016627.1 2952599 2954536 R PFAM: Protein kinase domain; PASTA domain; serine/threonine protein kinase complement(2952599..2954536) Clostridium clariflavum DSM 19732 11562982 YP_005047060.1 CDS Clocl_2567 NC_016627.1 2954772 2955509 R PFAM: Protein phosphatase 2C; serine/threonine protein phosphatase complement(2954772..2955509) Clostridium clariflavum DSM 19732 11562983 YP_005047061.1 CDS Clocl_2568 NC_016627.1 2955573 2956619 R PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; 23S rRNA m(2)A-2503 methyltransferase complement(2955573..2956619) Clostridium clariflavum DSM 19732 11562984 YP_005047062.1 CDS Clocl_2569 NC_016627.1 2956624 2957976 R PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family putative RNA methylase; transcription antitermination factor NusB; ribosomal RNA small subunit methyltransferase RsmB/transcription antitermination factor NusB complement(2956624..2957976) Clostridium clariflavum DSM 19732 11562985 YP_005047063.1 CDS Clocl_2570 NC_016627.1 2958000 2958698 R PFAM: Putative neutral zinc metallopeptidase; putative Zn-dependent protease complement(2958000..2958698) Clostridium clariflavum DSM 19732 11562986 YP_005047064.1 CDS Clocl_2571 NC_016627.1 2958782 2959477 R PFAM: Protein of unknown function DUF116; manually curated; hypothetical protein complement(2958782..2959477) Clostridium clariflavum DSM 19732 11562987 YP_005047065.1 CDS Clocl_2572 NC_016627.1 2959524 2960441 R PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(2959524..2960441) Clostridium clariflavum DSM 19732 11562988 YP_005047066.1 CDS Clocl_2573 NC_016627.1 2960543 2961010 R PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(2960543..2961010) Clostridium clariflavum DSM 19732 11562989 YP_005047067.1 CDS Clocl_2574 NC_016627.1 2961087 2963534 R PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'; replication restart DNA helicase PriA complement(2961087..2963534) Clostridium clariflavum DSM 19732 11562990 YP_005047068.1 CDS Clocl_2575 NC_016627.1 2963742 2964254 R PFAM: Heptaprenyl diphosphate synthase component I; hypothetical protein complement(2963742..2964254) Clostridium clariflavum DSM 19732 11562991 YP_005047069.1 CDS Clocl_2576 NC_016627.1 2964380 2964772 R PFAM: Protein of unknown function (DUF1312); hypothetical protein complement(2964380..2964772) Clostridium clariflavum DSM 19732 11562992 YP_005047070.1 CDS Clocl_2577 NC_016627.1 2964744 2965805 R PFAM: ApbE family; membrane-associated lipoprotein involved in thiamine biosynthesis complement(2964744..2965805) Clostridium clariflavum DSM 19732 11562993 YP_005047071.1 CDS Clocl_2578 NC_016627.1 2965956 2966639 R PFAM: Single-strand binding protein family; single-stranded DNA-binding protein complement(2965956..2966639) Clostridium clariflavum DSM 19732 11562994 YP_005047072.1 CDS Clocl_2579 NC_016627.1 2967031 2967754 R PFAM: Mur ligase middle domain; manually curated; UDP-N-acetylmuramyl tripeptide synthase complement(join(2967031..2967690,2967689..2967754)) Clostridium clariflavum DSM 19732 11562995 YP_005047073.1 CDS Clocl_2580 NC_016627.1 2967865 2968635 R PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; putative xylanase/chitin deacetylase complement(2967865..2968635) Clostridium clariflavum DSM 19732 11562996 YP_005047074.1 CDS Clocl_2581 NC_016627.1 2968769 2969566 R hypothetical protein complement(2968769..2969566) Clostridium clariflavum DSM 19732 11562997 YP_005047075.1 CDS Clocl_2582 NC_016627.1 2969919 2970236 R PFAM: Domain of unknown function (DUF74); hypothetical protein complement(2969919..2970236) Clostridium clariflavum DSM 19732 11562998 YP_005047076.1 CDS Clocl_2583 NC_016627.1 2970271 2970957 R PFAM: HhH-GPD superfamily base excision DNA repair protein; putative endonuclease III-like protein complement(2970271..2970957) Clostridium clariflavum DSM 19732 11562999 YP_005047077.1 CDS Clocl_2584 NC_016627.1 2971031 2971288 R hypothetical protein complement(2971031..2971288) Clostridium clariflavum DSM 19732 11563000 YP_005047078.1 CDS Clocl_2585 NC_016627.1 2971577 2973421 D PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 2971577..2973421 Clostridium clariflavum DSM 19732 11563001 YP_005047079.1 CDS Clocl_2586 NC_016627.1 2973751 2974812 D PFAM: Integrase core domain; transposase, IS30 family 2973751..2974812 Clostridium clariflavum DSM 19732 11563002 YP_005047080.1 CDS Clocl_2588 NC_016627.1 2975999 2979928 D PFAM: Carbohydrate binding module (family 6); manually curated; CBM6-containing protein 2975999..2979928 Clostridium clariflavum DSM 19732 11563004 YP_005047081.1 CDS Clocl_2589 NC_016627.1 2980072 2983842 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II; phosphoribosylformylglycinamidine synthase complement(2980072..2983842) Clostridium clariflavum DSM 19732 11563005 YP_005047082.1 CDS Clocl_2590 NC_016627.1 2983972 2984868 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2983972..2984868 Clostridium clariflavum DSM 19732 11563006 YP_005047083.1 CDS Clocl_2591 NC_016627.1 2985144 2985695 D PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator with cupin domain 2985144..2985695 Clostridium clariflavum DSM 19732 11563007 YP_005047084.1 CDS Clocl_2592 NC_016627.1 2985713 2987365 D PFAM: AMP-binding enzyme; acyl-CoA synthetase/AMP-acid ligase 2985713..2987365 Clostridium clariflavum DSM 19732 11563008 YP_005047085.1 CDS Clocl_2593 NC_016627.1 2987468 2989363 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; molecular chaperone of HSP90 family complement(2987468..2989363) Clostridium clariflavum DSM 19732 11563009 YP_005047086.1 CDS Clocl_2594 NC_016627.1 2989522 2989950 R PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein complement(2989522..2989950) Clostridium clariflavum DSM 19732 11563010 YP_005047087.1 CDS Clocl_2595 NC_016627.1 2990078 2990614 R PFAM: Type IV leader peptidase family; Flp pilus assembly protein, protease CpaA complement(2990078..2990614) Clostridium clariflavum DSM 19732 11563011 YP_005047088.1 CDS Clocl_2596 NC_016627.1 2990633 2992216 R PFAM: FHA domain; FHA domain-containing protein complement(2990633..2992216) Clostridium clariflavum DSM 19732 11563012 YP_005047089.1 CDS Clocl_2597 NC_016627.1 2992438 2996190 R PFAM: GGDEF domain; NB-ARC domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(2992438..2996190) Clostridium clariflavum DSM 19732 11563013 YP_005047090.1 CDS Clocl_2598 NC_016627.1 2996744 2997892 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(2996744..2997892) Clostridium clariflavum DSM 19732 11563014 YP_005047091.1 CDS Clocl_2599 NC_016627.1 2998082 2999254 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(2998082..2999254) Clostridium clariflavum DSM 19732 11563015 YP_005047092.1 CDS Clocl_2600 NC_016627.1 2999424 3000623 R PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro aminopeptidase complement(2999424..3000623) Clostridium clariflavum DSM 19732 11563016 YP_005047093.1 CDS Clocl_2601 NC_016627.1 3000846 3001178 D hypothetical protein 3000846..3001178 Clostridium clariflavum DSM 19732 11563017 YP_005047094.1 CDS Clocl_2602 NC_016627.1 3001258 3001803 D hypothetical protein 3001258..3001803 Clostridium clariflavum DSM 19732 11563018 YP_005047095.1 CDS Clocl_2603 NC_016627.1 3002016 3003233 R PFAM: Transposase, Mutator family; transposase complement(3002016..3003233) Clostridium clariflavum DSM 19732 11563019 YP_005047096.1 CDS Clocl_2604 NC_016627.1 3003485 3004651 R PFAM: Tetratricopeptide repeat; manually curated; hypothetical protein complement(3003485..3004651) Clostridium clariflavum DSM 19732 11563020 YP_005047097.1 CDS Clocl_2605 NC_016627.1 3004690 3006105 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase complement(3004690..3006105) Clostridium clariflavum DSM 19732 11563021 YP_005047098.1 CDS Clocl_2606 NC_016627.1 3006135 3008876 R PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit secA complement(3006135..3008876) Clostridium clariflavum DSM 19732 11563022 YP_005047099.1 CDS Clocl_2607 NC_016627.1 3009008 3009616 R hypothetical protein complement(3009008..3009616) Clostridium clariflavum DSM 19732 11563023 YP_005047100.1 CDS Clocl_2608 NC_016627.1 3009641 3010054 R hypothetical protein complement(3009641..3010054) Clostridium clariflavum DSM 19732 11563024 YP_005047101.1 CDS Clocl_2609 NC_016627.1 3010144 3010446 R PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD; TrpR-related protein YerC/YecD complement(3010144..3010446) Clostridium clariflavum DSM 19732 11563025 YP_005047102.1 CDS Clocl_2610 NC_016627.1 3011263 3012594 D PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase/poly(A) polymerase 3011263..3012594 Clostridium clariflavum DSM 19732 11563026 YP_005047103.1 CDS Clocl_2611 NC_016627.1 3012591 3013514 D PFAM: Putative lysophospholipase; lysophospholipase 3012591..3013514 Clostridium clariflavum DSM 19732 11563027 YP_005047104.1 CDS Clocl_2612 NC_016627.1 3013648 3015057 D hypothetical protein 3013648..3015057 Clostridium clariflavum DSM 19732 11563028 YP_005047105.1 CDS Clocl_2614 NC_016627.1 3016236 3016481 R PFAM: Transposase; transposase complement(3016236..3016481) Clostridium clariflavum DSM 19732 11563030 YP_005047106.1 CDS Clocl_2616 NC_016627.1 3021035 3022426 D PFAM: Transposase DDE domain; transposase family protein 3021035..3022426 Clostridium clariflavum DSM 19732 11563032 YP_005047107.1 CDS Clocl_2617 NC_016627.1 3023170 3023703 R PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated exonuclease, Cas4 family complement(3023170..3023703) Clostridium clariflavum DSM 19732 11563033 YP_005047108.1 CDS Clocl_2618 NC_016627.1 3023724 3025916 R PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase, Cas3 family complement(3023724..3025916) Clostridium clariflavum DSM 19732 11563034 YP_005047109.1 CDS Clocl_2619 NC_016627.1 3025932 3026681 R PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/TNEAP; CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein, Cas5t family complement(3025932..3026681) Clostridium clariflavum DSM 19732 11563035 YP_005047110.1 CDS Clocl_2620 NC_016627.1 3026668 3027552 R TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP; CRISPR-associated autoregulator, Cst2 family complement(3026668..3027552) Clostridium clariflavum DSM 19732 11563036 YP_005047111.1 CDS Clocl_2621 NC_016627.1 3027552 3029141 R PFAM: CRISPR-associated protein (Cas_CXXC_CXXC); TIGRFAM: CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP; manually curated; CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP complement(3027552..3029141) Clostridium clariflavum DSM 19732 11563037 YP_005047112.1 CDS Clocl_2622 NC_016627.1 3029556 3030845 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3029556..3030845 Clostridium clariflavum DSM 19732 11563038 YP_005047113.1 CDS Clocl_2623 NC_016627.1 3031266 3031505 R hypothetical protein complement(3031266..3031505) Clostridium clariflavum DSM 19732 11563039 YP_005047114.1 CDS Clocl_2624 NC_016627.1 3032261 3033574 R hypothetical protein complement(3032261..3033574) Clostridium clariflavum DSM 19732 11563040 YP_005047115.1 CDS Clocl_2625 NC_016627.1 3033552 3034139 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(3033552..3034139) Clostridium clariflavum DSM 19732 11563041 YP_005047116.1 CDS Clocl_2626 NC_016627.1 3034486 3035130 R PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase complement(3034486..3035130) Clostridium clariflavum DSM 19732 11563042 YP_005047117.1 CDS Clocl_2627 NC_016627.1 3035127 3035921 R PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase complement(3035127..3035921) Clostridium clariflavum DSM 19732 11563043 YP_005047118.1 CDS Clocl_2628 NC_016627.1 3035992 3037020 R PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(3035992..3037020) Clostridium clariflavum DSM 19732 11563044 YP_005047119.1 CDS Clocl_2629 NC_016627.1 3037092 3037676 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase, component II complement(3037092..3037676) Clostridium clariflavum DSM 19732 11563045 YP_005047120.1 CDS Clocl_2630 NC_016627.1 3037673 3039157 R PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; anthranilate synthase component I, archaeal clade; anthranilate synthase component I complement(3037673..3039157) Clostridium clariflavum DSM 19732 11563046 YP_005047121.1 CDS Clocl_2631 NC_016627.1 3039548 3041008 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DNA/RNA helicase 3039548..3041008 Clostridium clariflavum DSM 19732 11563047 YP_005047122.1 CDS Clocl_2632 NC_016627.1 3041138 3042199 D PFAM: Integrase core domain; transposase, IS30 family 3041138..3042199 Clostridium clariflavum DSM 19732 11563048 YP_005047123.1 CDS Clocl_2633 NC_016627.1 3042348 3043643 D hypothetical protein 3042348..3043643 Clostridium clariflavum DSM 19732 11563049 YP_005047124.1 CDS Clocl_2634 NC_016627.1 3043964 3045058 D PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF 3043964..3045058 Clostridium clariflavum DSM 19732 11563050 YP_005047125.1 CDS Clocl_2635 NC_016627.1 3045206 3045658 R PFAM: CheW-like domain; chemotaxis signal transduction protein complement(3045206..3045658) Clostridium clariflavum DSM 19732 11563051 YP_005047126.1 CDS Clocl_2636 NC_016627.1 3046264 3047277 D PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 3046264..3047277 Clostridium clariflavum DSM 19732 11563052 YP_005047127.1 CDS Clocl_2637 NC_016627.1 3047407 3049140 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(3047407..3049140) Clostridium clariflavum DSM 19732 11563053 YP_005047128.1 CDS Clocl_2638 NC_016627.1 3049318 3051546 R hypothetical protein complement(3049318..3051546) Clostridium clariflavum DSM 19732 11563054 YP_005047129.1 CDS Clocl_2639 NC_016627.1 3051733 3053055 R PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain; family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase complement(3051733..3053055) Clostridium clariflavum DSM 19732 11563055 YP_005047130.1 CDS Clocl_2640 NC_016627.1 3053467 3054597 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(3053467..3054597) Clostridium clariflavum DSM 19732 11563056 YP_005047131.1 CDS Clocl_2641 NC_016627.1 3054853 3055755 R PFAM: EamA-like transporter family; putative permease, DMT superfamily complement(3054853..3055755) Clostridium clariflavum DSM 19732 11563057 YP_005047132.1 CDS Clocl_2642 NC_016627.1 3055975 3056388 D hypothetical protein 3055975..3056388 Clostridium clariflavum DSM 19732 11563058 YP_005047133.1 CDS Clocl_2643 NC_016627.1 3056515 3057093 R PFAM: Transglycosylase SLT domain; lytic murein transglycosylase complement(3056515..3057093) Clostridium clariflavum DSM 19732 11563059 YP_005047134.1 CDS Clocl_2644 NC_016627.1 3057194 3057781 R PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase complement(3057194..3057781) Clostridium clariflavum DSM 19732 11563060 YP_005047135.1 CDS Clocl_2645 NC_016627.1 3057910 3060600 R PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I complement(3057910..3060600) Clostridium clariflavum DSM 19732 11563061 YP_005047136.1 CDS Clocl_2646 NC_016627.1 3060654 3060821 R hypothetical protein complement(3060654..3060821) Clostridium clariflavum DSM 19732 11563062 YP_005047137.1 CDS Clocl_2647 NC_016627.1 3061029 3062237 R hypothetical protein complement(3061029..3062237) Clostridium clariflavum DSM 19732 11563063 YP_005047138.1 CDS Clocl_2648 NC_016627.1 3062653 3063942 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3062653..3063942 Clostridium clariflavum DSM 19732 11563064 YP_005047139.1 CDS Clocl_2649 NC_016627.1 3064122 3064721 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, RpoE complement(3064122..3064721) Clostridium clariflavum DSM 19732 11563065 YP_005047140.1 CDS Clocl_2650 NC_016627.1 3065195 3065851 R PFAM: DUF218 domain; hypothetical protein complement(3065195..3065851) Clostridium clariflavum DSM 19732 11563066 YP_005047141.1 CDS Clocl_2651 NC_016627.1 3065861 3066769 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY complement(3065861..3066769) Clostridium clariflavum DSM 19732 11563067 YP_005047142.1 CDS Clocl_2652 NC_016627.1 3066891 3070463 R PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type; manually curated; chromosome segregation protein SMC complement(3066891..3070463) Clostridium clariflavum DSM 19732 11563068 YP_005047143.1 CDS Clocl_2653 NC_016627.1 3070630 3071628 R PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase complement(3070630..3071628) Clostridium clariflavum DSM 19732 11563069 YP_005047144.1 CDS Clocl_2654 NC_016627.1 3071819 3072949 R PFAM: HlyD family secretion protein; multidrug resistance efflux pump complement(3071819..3072949) Clostridium clariflavum DSM 19732 11563070 YP_005047145.1 CDS Clocl_2655 NC_016627.1 3072946 3073623 R PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase complement(3072946..3073623) Clostridium clariflavum DSM 19732 11563071 YP_005047146.1 CDS Clocl_2656 NC_016627.1 3073661 3076138 R PFAM: Predicted permease; lipoprotein release ABC transporter permease complement(3073661..3076138) Clostridium clariflavum DSM 19732 11563072 YP_005047147.1 CDS Clocl_2657 NC_016627.1 3076195 3077457 R PFAM: Major Facilitator Superfamily; manually curated; Major Facilitator Superfamily transporter complement(3076195..3077457) Clostridium clariflavum DSM 19732 11563073 YP_005047148.1 CDS Clocl_2658 NC_016627.1 3077559 3081032 R PFAM: Male sterility protein; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: thioester reductase domain; thioester reductase-like protein complement(3077559..3081032) Clostridium clariflavum DSM 19732 11563074 YP_005047149.1 CDS Clocl_2659 NC_016627.1 3081082 3088779 R PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; manually curated; non-ribosomal peptide synthase/amino acid adenylation enzyme complement(3081082..3088779) Clostridium clariflavum DSM 19732 11563075 YP_005047150.1 CDS Clocl_2660 NC_016627.1 3088809 3094031 R PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; putative polyketide synthase component,beta-ketoacyl synthase family protein,phosphopantetheine-containing protein complement(3088809..3094031) Clostridium clariflavum DSM 19732 11563076 YP_005047151.1 CDS Clocl_2661 NC_016627.1 3094046 3098002 R PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase family protein,phosphopantetheine-containing protein complement(3094046..3098002) Clostridium clariflavum DSM 19732 11563077 YP_005047152.1 CDS Clocl_2662 NC_016627.1 3098051 3099733 R PFAM: Peptidase family M28; putative aminopeptidase complement(3098051..3099733) Clostridium clariflavum DSM 19732 11563078 YP_005047153.1 CDS Clocl_2663 NC_016627.1 3099799 3108306 R PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase family protein,phosphopantetheine-containing protein complement(3099799..3108306) Clostridium clariflavum DSM 19732 11563079 YP_005047154.1 CDS Clocl_2664 NC_016627.1 3108375 3109655 R PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(3108375..3109655) Clostridium clariflavum DSM 19732 11563080 YP_005047155.1 CDS Clocl_2665 NC_016627.1 3109673 3112222 R PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; acyl-CoA synthetase complement(3109673..3112222) Clostridium clariflavum DSM 19732 11563081 YP_005047156.1 CDS Clocl_2666 NC_016627.1 3112487 3112666 R hypothetical protein complement(3112487..3112666) Clostridium clariflavum DSM 19732 11563082 YP_005047157.1 CDS Clocl_2667 NC_016627.1 3113472 3114257 R hypothetical protein complement(3113472..3114257) Clostridium clariflavum DSM 19732 11563083 YP_005047158.1 CDS Clocl_2668 NC_016627.1 3114292 3115956 R TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(3114292..3115956) Clostridium clariflavum DSM 19732 11563084 YP_005047159.1 CDS Clocl_2669 NC_016627.1 3116375 3117151 R hypothetical protein complement(3116375..3117151) Clostridium clariflavum DSM 19732 11563085 YP_005047160.1 CDS Clocl_2671 NC_016627.1 3118362 3118646 R hypothetical protein complement(3118362..3118646) Clostridium clariflavum DSM 19732 11563087 YP_005047161.1 CDS Clocl_2673 NC_016627.1 3119468 3120826 R PFAM: Mu transposase, C-terminal; Integrase core domain; transposase complement(3119468..3120826) Clostridium clariflavum DSM 19732 11563089 YP_005047162.1 CDS Clocl_2674 NC_016627.1 3120986 3121576 R hypothetical protein complement(3120986..3121576) Clostridium clariflavum DSM 19732 11563090 YP_005047163.1 CDS Clocl_2676 NC_016627.1 3122070 3122294 D hypothetical protein 3122070..3122294 Clostridium clariflavum DSM 19732 11563092 YP_005047164.1 CDS Clocl_2679 NC_016627.1 3124441 3124872 D PFAM: SMI1 / KNR4 family; putative glucan synthasis protein 3124441..3124872 Clostridium clariflavum DSM 19732 11563095 YP_005047165.1 CDS Clocl_2680 NC_016627.1 3125169 3125624 R PFAM: Transposase IS200 like; transposase complement(3125169..3125624) Clostridium clariflavum DSM 19732 11563096 YP_005047166.1 CDS Clocl_2681 NC_016627.1 3125860 3126060 R hypothetical protein complement(3125860..3126060) Clostridium clariflavum DSM 19732 11563097 YP_005047167.1 CDS Clocl_2683 NC_016627.1 3127225 3127578 R PFAM: IS66 Orf2 like protein; transposase complement(3127225..3127578) Clostridium clariflavum DSM 19732 11563099 YP_005047168.1 CDS Clocl_2684 NC_016627.1 3127575 3127928 R PFAM: Transposase; Transposase complement(3127575..3127928) Clostridium clariflavum DSM 19732 11563100 YP_005047169.1 CDS Clocl_2685 NC_016627.1 3128189 3128701 R hypothetical protein complement(3128189..3128701) Clostridium clariflavum DSM 19732 11563101 YP_005047170.1 CDS Clocl_2686 NC_016627.1 3128948 3129232 R hypothetical protein complement(3128948..3129232) Clostridium clariflavum DSM 19732 11563102 YP_005047171.1 CDS Clocl_2687 NC_016627.1 3129229 3130833 R PFAM: Transposase IS66 family; transposase complement(3129229..3130833) Clostridium clariflavum DSM 19732 11563103 YP_005047172.1 CDS Clocl_2688 NC_016627.1 3130897 3131250 R PFAM: IS66 Orf2 like protein; transposase complement(3130897..3131250) Clostridium clariflavum DSM 19732 11563104 YP_005047173.1 CDS Clocl_2689 NC_016627.1 3131247 3131600 R PFAM: Transposase; Transposase complement(3131247..3131600) Clostridium clariflavum DSM 19732 11563105 YP_005047174.1 CDS Clocl_2690 NC_016627.1 3131795 3132364 R manually curated; hypothetical protein complement(3131795..3132364) Clostridium clariflavum DSM 19732 11563106 YP_005047175.1 CDS Clocl_2691 NC_016627.1 3132377 3134572 R PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(3132377..3134572) Clostridium clariflavum DSM 19732 11563107 YP_005047176.1 CDS Clocl_2693 NC_016627.1 3137929 3138090 R hypothetical protein complement(3137929..3138090) Clostridium clariflavum DSM 19732 11563109 YP_005047177.1 CDS Clocl_2694 NC_016627.1 3138080 3138214 R hypothetical protein complement(3138080..3138214) Clostridium clariflavum DSM 19732 11563110 YP_005047178.1 CDS Clocl_2695 NC_016627.1 3138211 3139815 R PFAM: Transposase IS66 family; transposase complement(3138211..3139815) Clostridium clariflavum DSM 19732 11563111 YP_005047179.1 CDS Clocl_2696 NC_016627.1 3139879 3140583 R PFAM: IS66 Orf2 like protein; Transposase; transposase complement(3139879..3140583) Clostridium clariflavum DSM 19732 11563112 YP_005047180.1 CDS Clocl_2697 NC_016627.1 3140720 3141115 R hypothetical protein complement(3140720..3141115) Clostridium clariflavum DSM 19732 11563113 YP_005047181.1 CDS Clocl_2698 NC_016627.1 3141117 3146693 R PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(3141117..3146693) Clostridium clariflavum DSM 19732 11563114 YP_005047182.1 CDS Clocl_2699 NC_016627.1 3147028 3148245 R PFAM: Transposase, Mutator family; transposase complement(3147028..3148245) Clostridium clariflavum DSM 19732 11563115 YP_005047183.1 CDS Clocl_2700 NC_016627.1 3148334 3148873 R PFAM: RHS Repeat; Dockerin type I repeat; Putative Ig domain; TIGRFAM: YD repeat (two copies); putative Ig domain-containing protein,RHS repeat protein,dockerin-like protein complement(3148334..3148873) Clostridium clariflavum DSM 19732 11563116 YP_005047184.1 CDS Clocl_2701 NC_016627.1 3149117 3149632 R PFAM: Protein of unknown function (DUF2947); hypothetical protein complement(3149117..3149632) Clostridium clariflavum DSM 19732 11563117 YP_005047185.1 CDS Clocl_2702 NC_016627.1 3149644 3150006 R hypothetical protein complement(3149644..3150006) Clostridium clariflavum DSM 19732 11563118 YP_005047186.1 CDS Clocl_2704 NC_016627.1 3151181 3151480 R hypothetical protein complement(3151181..3151480) Clostridium clariflavum DSM 19732 11563120 YP_005047187.1 CDS Clocl_2705 NC_016627.1 3152130 3153020 R PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease complement(3152130..3153020) Clostridium clariflavum DSM 19732 11563121 YP_005047188.1 CDS Clocl_2706 NC_016627.1 3153064 3153876 R PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; nitrate/sulfonate/bicarbonate ABC transporter ATPase complement(3153064..3153876) Clostridium clariflavum DSM 19732 11563122 YP_005047189.1 CDS Clocl_2707 NC_016627.1 3153886 3154950 R PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein complement(3153886..3154950) Clostridium clariflavum DSM 19732 11563123 YP_005047190.1 CDS Clocl_2708 NC_016627.1 3154980 3155636 R PFAM: Protein of unknown function (DUF1847); metal-binding protein complement(3154980..3155636) Clostridium clariflavum DSM 19732 11563124 YP_005047191.1 CDS Clocl_2710 NC_016627.1 3155844 3156902 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; methyltransferase, MtaA/CmuA family complement(3155844..3156902) Clostridium clariflavum DSM 19732 11563126 YP_005047192.1 CDS Clocl_2711 NC_016627.1 3156902 3157558 R PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; putative cobalamin binding protein complement(3156902..3157558) Clostridium clariflavum DSM 19732 11563127 YP_005047193.1 CDS Clocl_2712 NC_016627.1 3158353 3158787 R PFAM: Dockerin type I repeat; dockerin-like protein complement(3158353..3158787) Clostridium clariflavum DSM 19732 11563128 YP_005047194.1 CDS Clocl_2713 NC_016627.1 3158813 3159103 R hypothetical protein complement(3158813..3159103) Clostridium clariflavum DSM 19732 11563129 YP_005047195.1 CDS Clocl_2714 NC_016627.1 3159055 3159237 R hypothetical protein complement(3159055..3159237) Clostridium clariflavum DSM 19732 11563130 YP_005047196.1 CDS Clocl_2715 NC_016627.1 3159277 3160422 R manually curated; hypothetical protein complement(3159277..3160422) Clostridium clariflavum DSM 19732 11563131 YP_005047197.1 CDS Clocl_2716 NC_016627.1 3160806 3161318 R PFAM: NUDIX domain; NTP pyrophosphohydrolase complement(3160806..3161318) Clostridium clariflavum DSM 19732 11563132 YP_005047198.1 CDS Clocl_2717 NC_016627.1 3161394 3161561 R PFAM: Uncharacterized small protein (DUF2292); hypothetical protein complement(3161394..3161561) Clostridium clariflavum DSM 19732 11563133 YP_005047199.1 CDS Clocl_2718 NC_016627.1 3161561 3161767 R PFAM: Uncharacterized small protein (DUF2292); hypothetical protein complement(3161561..3161767) Clostridium clariflavum DSM 19732 11563134 YP_005047200.1 CDS Clocl_2719 NC_016627.1 3161987 3162895 R PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 2-oxoacid:ferredoxin oxidoreductase subunit beta complement(3161987..3162895) Clostridium clariflavum DSM 19732 11563135 YP_005047201.1 CDS Clocl_2720 NC_016627.1 3162888 3164075 R PFAM: domain; Transketolase, C-terminal domain; 2-oxoacid:ferredoxin oxidoreductase subunit alpha complement(3162888..3164075) Clostridium clariflavum DSM 19732 11563136 YP_005047202.1 CDS Clocl_2721 NC_016627.1 3164065 3164376 R PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family complement(3164065..3164376) Clostridium clariflavum DSM 19732 11563137 YP_005047203.1 CDS Clocl_2722 NC_016627.1 3164373 3164918 R PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family complement(3164373..3164918) Clostridium clariflavum DSM 19732 11563138 YP_005047204.1 CDS Clocl_2723 NC_016627.1 3164915 3166087 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(3164915..3166087) Clostridium clariflavum DSM 19732 11563139 YP_005047205.1 CDS Clocl_2724 NC_016627.1 3166226 3167545 R PFAM: AMP-binding enzyme; coenzyme F390 synthetase complement(3166226..3167545) Clostridium clariflavum DSM 19732 11563140 YP_005047206.1 CDS Clocl_2725 NC_016627.1 3167561 3168226 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type metal ion transport system permease complement(3167561..3168226) Clostridium clariflavum DSM 19732 11563141 YP_005047207.1 CDS Clocl_2726 NC_016627.1 3168219 3169226 R PFAM: ABC transporter; NIL domain; ABC-type metal ion transport system, ATPase component complement(3168219..3169226) Clostridium clariflavum DSM 19732 11563142 YP_005047208.1 CDS Clocl_2727 NC_016627.1 3169289 3170164 R PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; ABC-type metal ion transport system, periplasmic component/surface antigen complement(3169289..3170164) Clostridium clariflavum DSM 19732 11563143 YP_005047209.1 CDS Clocl_2728 NC_016627.1 3170534 3172249 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; putative metal-binding protein complement(3170534..3172249) Clostridium clariflavum DSM 19732 11563144 YP_005047210.1 CDS Clocl_2729 NC_016627.1 3172249 3173277 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; methyltransferase, MtaA/CmuA family complement(3172249..3173277) Clostridium clariflavum DSM 19732 11563145 YP_005047211.1 CDS Clocl_2730 NC_016627.1 3173470 3174645 R PFAM: Aminotransferase class I and II; bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities complement(3173470..3174645) Clostridium clariflavum DSM 19732 11563146 YP_005047212.1 CDS Clocl_2731 NC_016627.1 3174661 3175467 R PFAM: Asparagine synthase; TIGRFAM: TIGR00268 family protein; hypothetical protein complement(3174661..3175467) Clostridium clariflavum DSM 19732 11563147 YP_005047213.1 CDS Clocl_2732 NC_016627.1 3175505 3175954 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator complement(3175505..3175954) Clostridium clariflavum DSM 19732 11563148 YP_005047214.1 CDS Clocl_2735 NC_016627.1 3176666 3177424 R PFAM: tRNAHis guanylyltransferase; hypothetical protein complement(3176666..3177424) Clostridium clariflavum DSM 19732 11563151 YP_005047215.1 CDS Clocl_2736 NC_016627.1 3177414 3177863 R putative kinase complement(3177414..3177863) Clostridium clariflavum DSM 19732 11563152 YP_005047216.1 CDS Clocl_2737 NC_016627.1 3178319 3178987 R hypothetical protein complement(3178319..3178987) Clostridium clariflavum DSM 19732 11563153 YP_005047217.1 CDS Clocl_2738 NC_016627.1 3179214 3180050 D PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain; putative transcriptional regulator 3179214..3180050 Clostridium clariflavum DSM 19732 11563154 YP_005047218.1 CDS Clocl_2739 NC_016627.1 3180208 3180579 D hypothetical protein 3180208..3180579 Clostridium clariflavum DSM 19732 11563155 YP_005047219.1 CDS Clocl_2740 NC_016627.1 3180593 3181033 R PFAM: AIG2-like family; hypothetical protein complement(3180593..3181033) Clostridium clariflavum DSM 19732 11563156 YP_005047220.1 CDS Clocl_2742 NC_016627.1 3181571 3182641 D PFAM: Integrase core domain; transposase, IS30 family 3181571..3182641 Clostridium clariflavum DSM 19732 11563158 YP_005047221.1 CDS Clocl_2743 NC_016627.1 3183087 3184304 R PFAM: Transposase, Mutator family; transposase complement(3183087..3184304) Clostridium clariflavum DSM 19732 11563159 YP_005047222.1 CDS Clocl_2744 NC_016627.1 3184835 3186124 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3184835..3186124 Clostridium clariflavum DSM 19732 11563160 YP_005047223.1 CDS Clocl_2745 NC_016627.1 3186328 3188193 R PFAM: Cohesin domain; S-layer homology domain; manually curated; putative S-layer protein complement(3186328..3188193) Clostridium clariflavum DSM 19732 11563161 YP_005047224.1 CDS Clocl_2746 NC_016627.1 3188531 3190552 R PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); O-Glycosyl hydrolase family 30; O-glycosyl hydrolase complement(3188531..3190552) Clostridium clariflavum DSM 19732 11563162 YP_005047225.1 CDS Clocl_2747 NC_016627.1 3190613 3192550 R PFAM: PA14 domain; PA14 domain-containing protein complement(3190613..3192550) Clostridium clariflavum DSM 19732 11563163 YP_005047226.1 CDS Clocl_2748 NC_016627.1 3192557 3193294 R TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma-I factor complement(3192557..3193294) Clostridium clariflavum DSM 19732 11563164 YP_005047227.1 CDS Clocl_2749 NC_016627.1 3193917 3196034 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(3193917..3196034) Clostridium clariflavum DSM 19732 11563165 YP_005047228.1 CDS Clocl_2750 NC_016627.1 3196327 3197352 R PFAM: D-ala D-ala ligase C-terminus; ATP-grasp enzyme, D-alanine-D-alanine ligase complement(3196327..3197352) Clostridium clariflavum DSM 19732 11563166 YP_005047229.1 CDS Clocl_2751 NC_016627.1 3197499 3198836 R hypothetical protein complement(3197499..3198836) Clostridium clariflavum DSM 19732 11563167 YP_005047230.1 CDS Clocl_2752 NC_016627.1 3199013 3199372 R hypothetical protein complement(3199013..3199372) Clostridium clariflavum DSM 19732 11563168 YP_005047231.1 CDS Clocl_2753 NC_016627.1 3199426 3200136 R PFAM: Protein of unknown function (DUF421); hypothetical protein complement(3199426..3200136) Clostridium clariflavum DSM 19732 11563169 YP_005047232.1 CDS Clocl_2755 NC_016627.1 3200751 3203393 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; pyruvate phosphate dikinase complement(3200751..3203393) Clostridium clariflavum DSM 19732 11563171 YP_005047233.1 CDS Clocl_2756 NC_016627.1 3203895 3205283 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; glycyl-tRNA synthetase complement(3203895..3205283) Clostridium clariflavum DSM 19732 11563172 YP_005047234.1 CDS Clocl_2757 NC_016627.1 3205333 3206637 R PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(3205333..3206637) Clostridium clariflavum DSM 19732 11563173 YP_005047235.1 CDS Clocl_2758 NC_016627.1 3206915 3207148 R PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega complement(3206915..3207148) Clostridium clariflavum DSM 19732 11563174 YP_005047236.1 CDS Clocl_2759 NC_016627.1 3207185 3207793 R PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase complement(3207185..3207793) Clostridium clariflavum DSM 19732 11563175 YP_005047237.1 CDS Clocl_2760 NC_016627.1 3207805 3208083 R PFAM: Domain of unknown function (DUF370); hypothetical protein complement(3207805..3208083) Clostridium clariflavum DSM 19732 11563176 YP_005047238.1 CDS Clocl_2761 NC_016627.1 3208103 3208981 R PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; hypothetical protein complement(3208103..3208981) Clostridium clariflavum DSM 19732 11563177 YP_005047239.1 CDS Clocl_2762 NC_016627.1 3209321 3209572 R hypothetical protein complement(3209321..3209572) Clostridium clariflavum DSM 19732 11563178 YP_005047240.1 CDS Clocl_2763 NC_016627.1 3209626 3211350 R PFAM: Ricin-type beta-trefoil lectin domain; Dockerin type I repeat; Glycosyl hydrolases family 43; beta-xylosidase complement(3209626..3211350) Clostridium clariflavum DSM 19732 11563179 YP_005047241.1 CDS Clocl_2764 NC_016627.1 3211828 3212199 R PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain complement(3211828..3212199) Clostridium clariflavum DSM 19732 11563180 YP_005047242.1 CDS Clocl_2765 NC_016627.1 3212199 3212942 R PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; RNA methyltransferase, RsmE family complement(3212199..3212942) Clostridium clariflavum DSM 19732 11563181 YP_005047243.1 CDS Clocl_2766 NC_016627.1 3212924 3213871 R PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; (50S ribosomal protein L11P)-lysine N-methyltransferase complement(3212924..3213871) Clostridium clariflavum DSM 19732 11563182 YP_005047244.1 CDS Clocl_2767 NC_016627.1 3213891 3215042 R PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; manually curated; chaperone protein DnaJ complement(3213891..3215042) Clostridium clariflavum DSM 19732 11563183 YP_005047245.1 CDS Clocl_2768 NC_016627.1 3215179 3217017 R PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK complement(3215179..3217017) Clostridium clariflavum DSM 19732 11563184 YP_005047246.1 CDS Clocl_2769 NC_016627.1 3217170 3217826 R PFAM: GrpE; molecular chaperone GrpE (heat shock protein) complement(3217170..3217826) Clostridium clariflavum DSM 19732 11563185 YP_005047247.1 CDS Clocl_2770 NC_016627.1 3217810 3218934 R PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA; heat shock gene repressor HrcA complement(3217810..3218934) Clostridium clariflavum DSM 19732 11563186 YP_005047248.1 CDS Clocl_2771 NC_016627.1 3219130 3220266 R PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; putative oxygen-independent coproporphyrinogen III oxidase complement(3219130..3220266) Clostridium clariflavum DSM 19732 11563187 YP_005047249.1 CDS Clocl_2772 NC_016627.1 3220281 3222092 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA complement(3220281..3222092) Clostridium clariflavum DSM 19732 11563188 YP_005047250.1 CDS Clocl_2773 NC_016627.1 3222389 3225136 R PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase complement(3222389..3225136) Clostridium clariflavum DSM 19732 11563189 YP_005047251.1 CDS Clocl_2774 NC_016627.1 3225460 3225762 R hypothetical protein complement(3225460..3225762) Clostridium clariflavum DSM 19732 11563190 YP_005047252.1 CDS Clocl_2775 NC_016627.1 3225854 3227098 R PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P; stage II sporulation protein P complement(3225854..3227098) Clostridium clariflavum DSM 19732 11563191 YP_005047253.1 CDS Clocl_2776 NC_016627.1 3227642 3227863 D hypothetical protein 3227642..3227863 Clostridium clariflavum DSM 19732 11563192 YP_005047254.1 CDS Clocl_2777 NC_016627.1 3228073 3232377 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative; hypothetical protein complement(3228073..3232377) Clostridium clariflavum DSM 19732 11563193 YP_005047255.1 CDS Clocl_2778 NC_016627.1 3232774 3233325 R PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; manually curated; non-canonical start codon; signal peptidase I complement(3232774..3233325) Clostridium clariflavum DSM 19732 11563194 YP_005047256.1 CDS Clocl_2779 NC_016627.1 3233554 3235338 R PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase complement(3233554..3235338) Clostridium clariflavum DSM 19732 11563195 YP_005047257.1 CDS Clocl_2780 NC_016627.1 3235373 3236626 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(3235373..3236626) Clostridium clariflavum DSM 19732 11563196 YP_005047258.1 CDS Clocl_2781 NC_016627.1 3237211 3238707 R PFAM: Radical SAM superfamily; TIGRFAM: coproporphyrinogen dehydrogenase HemZ; coproporphyrinogen dehydrogenase HemZ complement(3237211..3238707) Clostridium clariflavum DSM 19732 11563197 YP_005047259.1 CDS Clocl_2782 NC_016627.1 3238726 3239355 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(3238726..3239355) Clostridium clariflavum DSM 19732 11563198 YP_005047260.1 CDS Clocl_2783 NC_016627.1 3239441 3239890 R PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(3239441..3239890) Clostridium clariflavum DSM 19732 11563199 YP_005047261.1 CDS Clocl_2784 NC_016627.1 3239962 3242139 R PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; RelA/SpoT family (p)ppGpp synthetase complement(3239962..3242139) Clostridium clariflavum DSM 19732 11563200 YP_005047262.1 CDS Clocl_2785 NC_016627.1 3242257 3242772 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase complement(3242257..3242772) Clostridium clariflavum DSM 19732 11563201 YP_005047263.1 CDS Clocl_2786 NC_016627.1 3242883 3245357 R PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; exonuclease RecJ complement(3242883..3245357) Clostridium clariflavum DSM 19732 11563202 YP_005047264.1 CDS Clocl_2787 NC_016627.1 3245515 3246519 R PFAM: D-ala-D-ala dipeptidase; D-alanyl-D-alanine dipeptidase complement(3245515..3246519) Clostridium clariflavum DSM 19732 11563203 YP_005047265.1 CDS Clocl_2788 NC_016627.1 3246738 3247193 R PFAM: Transposase IS200 like; transposase complement(3246738..3247193) Clostridium clariflavum DSM 19732 11563204 YP_005047266.1 CDS Clocl_2789 NC_016627.1 3247372 3247815 R PFAM: Yqey-like protein; hypothetical protein complement(3247372..3247815) Clostridium clariflavum DSM 19732 11563205 YP_005047267.1 CDS Clocl_2790 NC_016627.1 3247830 3248006 R PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(3247830..3248006) Clostridium clariflavum DSM 19732 11563206 YP_005047268.1 CDS Clocl_2791 NC_016627.1 3248407 3251697 R PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Bacterial SNF2 helicase associated; SWIM zinc finger; DNA/RNA helicase complement(3248407..3251697) Clostridium clariflavum DSM 19732 11563207 YP_005047269.1 CDS Clocl_2792 NC_016627.1 3252004 3253401 D PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; manually curated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 3252004..3253401 Clostridium clariflavum DSM 19732 11563208 YP_005047270.1 CDS Clocl_2793 NC_016627.1 3253398 3253883 R PFAM: VanZ like family; putative integral membrane protein complement(3253398..3253883) Clostridium clariflavum DSM 19732 11563209 YP_005047271.1 CDS Clocl_2794 NC_016627.1 3254391 3255368 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3254391..3255368 Clostridium clariflavum DSM 19732 11563210 YP_005047272.1 CDS Clocl_2795 NC_016627.1 3255589 3256566 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3255589..3256566 Clostridium clariflavum DSM 19732 11563211 YP_005047273.1 CDS Clocl_2796 NC_016627.1 3256594 3259341 D manually curated; hypothetical protein 3256594..3259341 Clostridium clariflavum DSM 19732 11563212 YP_005047274.1 CDS Clocl_2797 NC_016627.1 3259436 3260836 R manually curated; hypothetical protein complement(3259436..3260836) Clostridium clariflavum DSM 19732 11563213 YP_005047275.1 CDS Clocl_2798 NC_016627.1 3260843 3261583 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor complement(3260843..3261583) Clostridium clariflavum DSM 19732 11563214 YP_005047276.1 CDS Clocl_2799 NC_016627.1 3261990 3263375 D manually curated; hypothetical protein 3261990..3263375 Clostridium clariflavum DSM 19732 11563215 YP_005047277.1 CDS Clocl_2802 NC_016627.1 3265409 3265792 R hypothetical protein complement(3265409..3265792) Clostridium clariflavum DSM 19732 11563218 YP_005047278.1 CDS Clocl_2803 NC_016627.1 3265872 3266444 R hypothetical protein complement(3265872..3266444) Clostridium clariflavum DSM 19732 11563219 YP_005047279.1 CDS Clocl_2804 NC_016627.1 3266574 3266927 R hypothetical protein complement(3266574..3266927) Clostridium clariflavum DSM 19732 11563220 YP_005047280.1 CDS Clocl_2806 NC_016627.1 3267304 3267696 R hypothetical protein complement(3267304..3267696) Clostridium clariflavum DSM 19732 11563222 YP_005047281.1 CDS Clocl_2807 NC_016627.1 3268428 3268742 R hypothetical protein complement(3268428..3268742) Clostridium clariflavum DSM 19732 11563223 YP_005047282.1 CDS Clocl_2809 NC_016627.1 3269885 3270628 R manually curated; hypothetical protein complement(3269885..3270628) Clostridium clariflavum DSM 19732 11563225 YP_005047283.1 CDS Clocl_2810 NC_016627.1 3270663 3271202 R hypothetical protein complement(3270663..3271202) Clostridium clariflavum DSM 19732 11563226 YP_005047284.1 CDS Clocl_2811 NC_016627.1 3271284 3272771 R PFAM: Polysaccharide biosynthesis protein; membrane protein involved in the export of O-antigen and teichoic acid complement(3271284..3272771) Clostridium clariflavum DSM 19732 11563227 YP_005047285.1 CDS Clocl_2812 NC_016627.1 3272924 3274144 R PFAM: O-Antigen ligase; Lipid A core--O-antigen ligase-like protein complement(3272924..3274144) Clostridium clariflavum DSM 19732 11563228 YP_005047286.1 CDS Clocl_2813 NC_016627.1 3274178 3275332 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3274178..3275332) Clostridium clariflavum DSM 19732 11563229 YP_005047287.1 CDS Clocl_2814 NC_016627.1 3275385 3276488 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3275385..3276488) Clostridium clariflavum DSM 19732 11563230 YP_005047288.1 CDS Clocl_2815 NC_016627.1 3276576 3277562 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(3276576..3277562) Clostridium clariflavum DSM 19732 11563231 YP_005047289.1 CDS Clocl_2816 NC_016627.1 3277576 3278775 R PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; coenzyme F420-reducing hydrogenase subunit beta complement(3277576..3278775) Clostridium clariflavum DSM 19732 11563232 YP_005047290.1 CDS Clocl_2817 NC_016627.1 3278963 3280204 R PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(3278963..3280204) Clostridium clariflavum DSM 19732 11563233 YP_005047291.1 CDS Clocl_2818 NC_016627.1 3281100 3281969 R hypothetical protein complement(3281100..3281969) Clostridium clariflavum DSM 19732 11563234 YP_005047292.1 CDS Clocl_2819 NC_016627.1 3281994 3282821 R PFAM: CotH protein; CotH protein complement(3281994..3282821) Clostridium clariflavum DSM 19732 11563235 YP_005047293.1 CDS Clocl_2820 NC_016627.1 3282885 3284276 R PFAM: Transposase DDE domain; transposase family protein complement(3282885..3284276) Clostridium clariflavum DSM 19732 11563236 YP_005047294.1 CDS Clocl_2821 NC_016627.1 3284399 3285967 R PFAM: CotH protein; CotH protein complement(3284399..3285967) Clostridium clariflavum DSM 19732 11563237 YP_005047295.1 CDS Clocl_2822 NC_016627.1 3286227 3287621 R PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(3286227..3287621) Clostridium clariflavum DSM 19732 11563238 YP_005047296.1 CDS Clocl_2823 NC_016627.1 3288300 3289517 R PFAM: Transposase, Mutator family; transposase complement(3288300..3289517) Clostridium clariflavum DSM 19732 11563239 YP_005047297.1 CDS Clocl_2824 NC_016627.1 3289657 3290859 R PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; coenzyme F420-reducing hydrogenase subunit beta complement(3289657..3290859) Clostridium clariflavum DSM 19732 11563240 YP_005047298.1 CDS Clocl_2825 NC_016627.1 3290991 3292121 R PFAM: Polysaccharide pyruvyl transferase; manually curated; Polysaccharide pyruvyl transferase complement(3290991..3292121) Clostridium clariflavum DSM 19732 11563241 YP_005047299.1 CDS Clocl_2826 NC_016627.1 3293701 3294735 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(3293701..3294735) Clostridium clariflavum DSM 19732 11563242 YP_005047300.1 CDS Clocl_2827 NC_016627.1 3295008 3296183 R PFAM: Polysaccharide pyruvyl transferase; Polysaccharide pyruvyl transferase complement(3295008..3296183) Clostridium clariflavum DSM 19732 11563243 YP_005047301.1 CDS Clocl_2828 NC_016627.1 3296202 3297299 R PFAM: Glycosyl transferases group 1; glycosyltransferase complement(3296202..3297299) Clostridium clariflavum DSM 19732 11563244 YP_005047302.1 CDS Clocl_2829 NC_016627.1 3297523 3298062 R PFAM: Transcription termination factor nusG; transcription antiterminator complement(3297523..3298062) Clostridium clariflavum DSM 19732 11563245 YP_005047303.1 CDS Clocl_2830 NC_016627.1 3298230 3299108 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase complement(3298230..3299108) Clostridium clariflavum DSM 19732 11563246 YP_005047304.1 CDS Clocl_2831 NC_016627.1 3299145 3300005 R PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(3299145..3300005) Clostridium clariflavum DSM 19732 11563247 YP_005047305.1 CDS Clocl_2832 NC_016627.1 3300002 3300607 R PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase complement(3300002..3300607) Clostridium clariflavum DSM 19732 11563248 YP_005047306.1 CDS Clocl_2833 NC_016627.1 3300683 3302083 R PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide biosynthesis protein complement(3300683..3302083) Clostridium clariflavum DSM 19732 11563249 YP_005047307.1 CDS Clocl_2834 NC_016627.1 3302111 3302731 R hypothetical protein complement(3302111..3302731) Clostridium clariflavum DSM 19732 11563250 YP_005047308.1 CDS Clocl_2835 NC_016627.1 3302808 3303596 R PFAM: PHP domain; manually curated; capsular polysaccharide biosynthesis protein complement(3302808..3303596) Clostridium clariflavum DSM 19732 11563251 YP_005047309.1 CDS Clocl_2836 NC_016627.1 3303856 3306027 R PFAM: S-layer homology domain; putative S-layer protein complement(3303856..3306027) Clostridium clariflavum DSM 19732 11563252 YP_005047310.1 CDS Clocl_2837 NC_016627.1 3306416 3306760 R PFAM: HIT domain; HIT family hydrolase, diadenosine tetraphosphate hydrolase complement(3306416..3306760) Clostridium clariflavum DSM 19732 11563253 YP_005047311.1 CDS Clocl_2838 NC_016627.1 3306923 3309562 R PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase complement(3306923..3309562) Clostridium clariflavum DSM 19732 11563254 YP_005047312.1 CDS Clocl_2839 NC_016627.1 3309705 3310754 R PFAM: Domain of unknown function DUF20; putative permease complement(3309705..3310754) Clostridium clariflavum DSM 19732 11563255 YP_005047313.1 CDS Clocl_2840 NC_016627.1 3310909 3311091 R hypothetical protein complement(3310909..3311091) Clostridium clariflavum DSM 19732 11563256 YP_005047314.1 CDS Clocl_2841 NC_016627.1 3311140 3311679 R PFAM: PRC-barrel domain; hypothetical protein complement(3311140..3311679) Clostridium clariflavum DSM 19732 11563257 YP_005047315.1 CDS Clocl_2842 NC_016627.1 3312034 3313392 D PFAM: Protein of unknown function (DUF1015); hypothetical protein 3312034..3313392 Clostridium clariflavum DSM 19732 11563258 YP_005047316.1 CDS Clocl_2843 NC_016627.1 3313473 3315071 R PFAM: Cellulose binding domain; Cellulose binding domain-containing protein complement(3313473..3315071) Clostridium clariflavum DSM 19732 11563259 YP_005047317.1 CDS Clocl_2844 NC_016627.1 3315046 3315828 R TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma-I factor complement(3315046..3315828) Clostridium clariflavum DSM 19732 11563260 YP_005047318.1 CDS Clocl_2845 NC_016627.1 3316023 3318383 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; manually curated; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain complement(3316023..3318383) Clostridium clariflavum DSM 19732 11563261 YP_005047319.1 CDS Clocl_2846 NC_016627.1 3318644 3319318 R hypothetical protein complement(3318644..3319318) Clostridium clariflavum DSM 19732 11563262 YP_005047320.1 CDS Clocl_2847 NC_016627.1 3319538 3320191 D PFAM: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 3319538..3320191 Clostridium clariflavum DSM 19732 11563263 YP_005047321.1 CDS Clocl_2848 NC_016627.1 3320260 3320979 R PFAM: Zinc dependent phospholipase C; Zinc dependent phospholipase C complement(3320260..3320979) Clostridium clariflavum DSM 19732 11563264 YP_005047322.1 CDS Clocl_2849 NC_016627.1 3321246 3321449 R hypothetical protein complement(3321246..3321449) Clostridium clariflavum DSM 19732 11563265 YP_005047323.1 CDS Clocl_2850 NC_016627.1 3321866 3323155 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3321866..3323155 Clostridium clariflavum DSM 19732 11563266 YP_005047324.1 CDS Clocl_2851 NC_016627.1 3323377 3324255 R PFAM: Bacterial type II secretion system protein F domain; Flp pilus assembly protein TadC complement(3323377..3324255) Clostridium clariflavum DSM 19732 11563267 YP_005047325.1 CDS Clocl_2852 NC_016627.1 3324267 3325088 R PFAM: Bacterial type II secretion system protein F domain; Flp pilus assembly protein TadB complement(3324267..3325088) Clostridium clariflavum DSM 19732 11563268 YP_005047326.1 CDS Clocl_2853 NC_016627.1 3325076 3326314 R PFAM: Type II/IV secretion system protein; Flp pilus assembly protein, ATPase CpaF complement(3325076..3326314) Clostridium clariflavum DSM 19732 11563269 YP_005047327.1 CDS Clocl_2854 NC_016627.1 3326331 3327443 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein complement(3326331..3327443) Clostridium clariflavum DSM 19732 11563270 YP_005047328.1 CDS Clocl_2855 NC_016627.1 3327624 3328232 R hypothetical protein complement(3327624..3328232) Clostridium clariflavum DSM 19732 11563271 YP_005047329.1 CDS Clocl_2856 NC_016627.1 3328710 3329141 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor 3328710..3329141 Clostridium clariflavum DSM 19732 11563272 YP_005047330.1 CDS Clocl_2857 NC_016627.1 3329187 3330929 R PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase complement(3329187..3330929) Clostridium clariflavum DSM 19732 11563273 YP_005047331.1 CDS Clocl_2858 NC_016627.1 3331001 3332230 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(3331001..3332230) Clostridium clariflavum DSM 19732 11563274 YP_005047332.1 CDS Clocl_2859 NC_016627.1 3332486 3334072 D PFAM: Protein of unknown function (DUF342); putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon 3332486..3334072 Clostridium clariflavum DSM 19732 11563275 YP_005047333.1 CDS Clocl_2860 NC_016627.1 3334447 3335685 D PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase; manually curated; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 3334447..3335685 Clostridium clariflavum DSM 19732 11563276 YP_005047334.1 CDS Clocl_2861 NC_016627.1 3335834 3336040 D PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 3335834..3336040 Clostridium clariflavum DSM 19732 11563277 YP_005047335.1 CDS Clocl_2863 NC_016627.1 3337741 3338412 R PFAM: TrkA-N domain; TrkA-C domain; K+ transport system, NAD-binding component complement(3337741..3338412) Clostridium clariflavum DSM 19732 11563279 YP_005047336.1 CDS Clocl_2864 NC_016627.1 3338458 3339072 R PFAM: TrkA-N domain; K+ transport system, NAD-binding component complement(3338458..3339072) Clostridium clariflavum DSM 19732 11563280 YP_005047337.1 CDS Clocl_2865 NC_016627.1 3339451 3340164 D PFAM: Protein of unknown function (DUF421); hypothetical protein 3339451..3340164 Clostridium clariflavum DSM 19732 11563281 YP_005047338.1 CDS Clocl_2866 NC_016627.1 3340166 3340555 D hypothetical protein 3340166..3340555 Clostridium clariflavum DSM 19732 11563282 YP_005047339.1 CDS Clocl_2867 NC_016627.1 3340569 3341567 R PFAM: Sodium/calcium exchanger protein; Ca2+/Na+ antiporter complement(3340569..3341567) Clostridium clariflavum DSM 19732 11563283 YP_005047340.1 CDS Clocl_2869 NC_016627.1 3342383 3343264 R PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; hypothetical protein complement(3342383..3343264) Clostridium clariflavum DSM 19732 11563285 YP_005047341.1 CDS Clocl_2870 NC_016627.1 3343341 3344462 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; glucose-1-phosphate adenylyltransferase, GlgD subunit complement(3343341..3344462) Clostridium clariflavum DSM 19732 11563286 YP_005047342.1 CDS Clocl_2871 NC_016627.1 3344459 3345739 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase complement(3344459..3345739) Clostridium clariflavum DSM 19732 11563287 YP_005047343.1 CDS Clocl_2872 NC_016627.1 3346068 3347723 R PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain complement(3346068..3347723) Clostridium clariflavum DSM 19732 11563288 YP_005047344.1 CDS Clocl_2873 NC_016627.1 3348074 3348304 R PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB-family; Glutaredoxin-like protein, YruB-family complement(3348074..3348304) Clostridium clariflavum DSM 19732 11563289 YP_005047345.1 CDS Clocl_2874 NC_016627.1 3348498 3348629 R hypothetical protein complement(3348498..3348629) Clostridium clariflavum DSM 19732 11563290 YP_005047346.1 CDS Clocl_2875 NC_016627.1 3348690 3349217 R PFAM: Carbohydrate binding domain (family 25); Carbohydrate binding domain (family 25) complement(3348690..3349217) Clostridium clariflavum DSM 19732 11563291 YP_005047347.1 CDS Clocl_2876 NC_016627.1 3349664 3350830 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); methylase involved in ubiquinone/menaquinone biosynthesis complement(3349664..3350830) Clostridium clariflavum DSM 19732 11563292 YP_005047348.1 CDS Clocl_2877 NC_016627.1 3350850 3351602 R PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein complement(3350850..3351602) Clostridium clariflavum DSM 19732 11563293 YP_005047349.1 CDS Clocl_2878 NC_016627.1 3351628 3352998 R PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; NOL1/NOP2/sun family putative RNA methylase complement(3351628..3352998) Clostridium clariflavum DSM 19732 11563294 YP_005047350.1 CDS Clocl_2879 NC_016627.1 3353408 3354652 D PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 3353408..3354652 Clostridium clariflavum DSM 19732 11563295 YP_005047351.1 CDS Clocl_2880 NC_016627.1 3354809 3355543 R PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase, beta-lactamase superfamily III complement(3354809..3355543) Clostridium clariflavum DSM 19732 11563296 YP_005047352.1 CDS Clocl_2881 NC_016627.1 3355575 3356129 R PFAM: Protein of unknown function (DUF1393); hypothetical protein complement(3355575..3356129) Clostridium clariflavum DSM 19732 11563297 YP_005047353.1 CDS Clocl_2882 NC_016627.1 3356235 3356825 R PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; alpha-ribazole phosphatase complement(3356235..3356825) Clostridium clariflavum DSM 19732 11563298 YP_005047354.1 CDS Clocl_2883 NC_016627.1 3356848 3357600 R PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin-5'-phosphate synthase complement(3356848..3357600) Clostridium clariflavum DSM 19732 11563299 YP_005047355.1 CDS Clocl_2884 NC_016627.1 3357646 3358203 R PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; adenosyl cobinamide kinase complement(3357646..3358203) Clostridium clariflavum DSM 19732 11563300 YP_005047356.1 CDS Clocl_2885 NC_016627.1 3358270 3359322 R PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein cobD/CbiB complement(3358270..3359322) Clostridium clariflavum DSM 19732 11563301 YP_005047357.1 CDS Clocl_2886 NC_016627.1 3359786 3361135 R PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase complement(3359786..3361135) Clostridium clariflavum DSM 19732 11563302 YP_005047358.1 CDS Clocl_2887 NC_016627.1 3361208 3362455 R PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; homoserine dehydrogenase complement(3361208..3362455) Clostridium clariflavum DSM 19732 11563303 YP_005047359.1 CDS Clocl_2888 NC_016627.1 3362470 3362913 R ACT domain-containing protein complement(3362470..3362913) Clostridium clariflavum DSM 19732 11563304 YP_005047360.1 CDS Clocl_2889 NC_016627.1 3363153 3364661 R PFAM: Domain of unknown function (DUF3369); HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; hypothetical protein complement(3363153..3364661) Clostridium clariflavum DSM 19732 11563305 YP_005047361.1 CDS Clocl_2890 NC_016627.1 3365042 3366130 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 3365042..3366130 Clostridium clariflavum DSM 19732 11563306 YP_005047362.1 CDS Clocl_2891 NC_016627.1 3366176 3366538 R PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain complement(3366176..3366538) Clostridium clariflavum DSM 19732 11563307 YP_005047363.1 CDS Clocl_2892 NC_016627.1 3366723 3368222 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; L-threonine synthase complement(3366723..3368222) Clostridium clariflavum DSM 19732 11563308 YP_005047364.1 CDS Clocl_2893 NC_016627.1 3368576 3369697 R PFAM: Patatin-like phospholipase; putative esterase of the alpha-beta hydrolase superfamily complement(3368576..3369697) Clostridium clariflavum DSM 19732 11563309 YP_005047365.1 CDS Clocl_2894 NC_016627.1 3369771 3370544 R serine/threonine protein phosphatase complement(3369771..3370544) Clostridium clariflavum DSM 19732 11563310 YP_005047366.1 CDS Clocl_2895 NC_016627.1 3370608 3371276 R PFAM: Type IV leader peptidase family; prepilin signal peptidase PulO-like peptidase complement(3370608..3371276) Clostridium clariflavum DSM 19732 11563311 YP_005047367.1 CDS Clocl_2896 NC_016627.1 3371859 3372887 D replication restart DNA helicase PriA 3371859..3372887 Clostridium clariflavum DSM 19732 11563312 YP_005047368.1 CDS Clocl_2897 NC_016627.1 3372880 3373722 D PFAM: Domain of unknown function (DUF477); beta-propeller domain-containing protein, methanol dehydrogenase 3372880..3373722 Clostridium clariflavum DSM 19732 11563313 YP_005047369.1 CDS Clocl_2898 NC_016627.1 3373855 3374328 R hypothetical protein complement(3373855..3374328) Clostridium clariflavum DSM 19732 11563314 YP_005047370.1 CDS Clocl_2899 NC_016627.1 3374428 3375546 R PFAM: Acyltransferase family; manually curated; hypothetical protein complement(3374428..3375546) Clostridium clariflavum DSM 19732 11563315 YP_005047371.1 CDS Clocl_2900 NC_016627.1 3375714 3376451 D PFAM: YhhN-like protein; YjeF-like protein 3375714..3376451 Clostridium clariflavum DSM 19732 11563316 YP_005047372.1 CDS Clocl_2901 NC_016627.1 3376546 3377070 R PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit complement(3376546..3377070) Clostridium clariflavum DSM 19732 11563317 YP_005047373.1 CDS Clocl_2902 NC_016627.1 3377115 3378401 R PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein; homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit complement(3377115..3378401) Clostridium clariflavum DSM 19732 11563318 YP_005047374.1 CDS Clocl_2903 NC_016627.1 3378673 3379428 R PFAM: Protein of unknown function (DUF1266); hypothetical protein complement(3378673..3379428) Clostridium clariflavum DSM 19732 11563319 YP_005047375.1 CDS Clocl_2904 NC_016627.1 3379481 3380782 R PFAM: DnaJ domain; Tetratricopeptide repeat; manually curated; DnaJ-class molecular chaperone with C-terminal Zn finger domain complement(3379481..3380782) Clostridium clariflavum DSM 19732 11563320 YP_005047376.1 CDS Clocl_2905 NC_016627.1 3380787 3382484 R PFAM: Hsp70 protein; molecular chaperone complement(3380787..3382484) Clostridium clariflavum DSM 19732 11563321 YP_005047377.1 CDS Clocl_2906 NC_016627.1 3382629 3383330 R PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein complement(3382629..3383330) Clostridium clariflavum DSM 19732 11563322 YP_005047378.1 CDS Clocl_2907 NC_016627.1 3383353 3383535 R hypothetical protein complement(3383353..3383535) Clostridium clariflavum DSM 19732 11563323 YP_005047379.1 CDS Clocl_2908 NC_016627.1 3383595 3384095 R PFAM: Nitroreductase family; nitroreductase complement(3383595..3384095) Clostridium clariflavum DSM 19732 11563324 YP_005047380.1 CDS Clocl_2909 NC_016627.1 3384287 3384808 R PFAM: Nitroreductase family; nitroreductase complement(3384287..3384808) Clostridium clariflavum DSM 19732 11563325 YP_005047381.1 CDS Clocl_2910 NC_016627.1 3384842 3385303 R PFAM: VanZ like family; glycopeptide antibiotics resistance protein complement(3384842..3385303) Clostridium clariflavum DSM 19732 11563326 YP_005047382.1 CDS Clocl_2911 NC_016627.1 3385509 3385988 D PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; Mn-dependent transcriptional regulator 3385509..3385988 Clostridium clariflavum DSM 19732 11563327 YP_005047383.1 CDS Clocl_2912 NC_016627.1 3386358 3388253 R hypothetical protein complement(3386358..3388253) Clostridium clariflavum DSM 19732 11563328 YP_005047384.1 CDS Clocl_2913 NC_016627.1 3388295 3389035 R hypothetical protein complement(3388295..3389035) Clostridium clariflavum DSM 19732 11563329 YP_005047385.1 CDS Clocl_2914 NC_016627.1 3389155 3390165 R hypothetical protein complement(3389155..3390165) Clostridium clariflavum DSM 19732 11563330 YP_005047386.1 CDS Clocl_2915 NC_016627.1 3390247 3391713 R hypothetical protein complement(3390247..3391713) Clostridium clariflavum DSM 19732 11563331 YP_005047387.1 CDS Clocl_2916 NC_016627.1 3392192 3392815 D hypothetical protein 3392192..3392815 Clostridium clariflavum DSM 19732 11563332 YP_005047388.1 CDS Clocl_2917 NC_016627.1 3392920 3393465 D hypothetical protein 3392920..3393465 Clostridium clariflavum DSM 19732 11563333 YP_005047389.1 CDS Clocl_2918 NC_016627.1 3393411 3393656 D hypothetical protein 3393411..3393656 Clostridium clariflavum DSM 19732 11563334 YP_005047390.1 CDS Clocl_2919 NC_016627.1 3393881 3394441 R PFAM: Rubrerythrin; rubrerythrin complement(3393881..3394441) Clostridium clariflavum DSM 19732 11563335 YP_005047391.1 CDS Clocl_2920 NC_016627.1 3394610 3395419 D PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 3394610..3395419 Clostridium clariflavum DSM 19732 11563336 YP_005047392.1 CDS Clocl_2921 NC_016627.1 3395416 3396315 R hypothetical protein complement(3395416..3396315) Clostridium clariflavum DSM 19732 11563337 YP_005047393.1 CDS Clocl_2922 NC_016627.1 3396454 3397266 R hypothetical protein complement(3396454..3397266) Clostridium clariflavum DSM 19732 11563338 YP_005047394.1 CDS Clocl_2923 NC_016627.1 3397387 3398427 R hypothetical protein complement(3397387..3398427) Clostridium clariflavum DSM 19732 11563339 YP_005047395.1 CDS Clocl_2924 NC_016627.1 3398520 3398957 R hypothetical protein complement(3398520..3398957) Clostridium clariflavum DSM 19732 11563340 YP_005047396.1 CDS Clocl_2925 NC_016627.1 3398998 3402633 R PFAM: Eco57I restriction endonuclease; manually curated; Eco57I restriction endonuclease complement(3398998..3402633) Clostridium clariflavum DSM 19732 11563341 YP_005047397.1 CDS Clocl_2926 NC_016627.1 3402819 3403574 R hypothetical protein complement(3402819..3403574) Clostridium clariflavum DSM 19732 11563342 YP_005047398.1 CDS Clocl_2927 NC_016627.1 3403686 3404522 R PFAM: Domain of unknown function (DUF1848); hypothetical protein complement(3403686..3404522) Clostridium clariflavum DSM 19732 11563343 YP_005047399.1 CDS Clocl_2928 NC_016627.1 3404926 3405177 R hypothetical protein complement(3404926..3405177) Clostridium clariflavum DSM 19732 11563344 YP_005047400.1 CDS Clocl_2929 NC_016627.1 3405726 3407756 R PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein; hypothetical protein complement(3405726..3407756) Clostridium clariflavum DSM 19732 11563345 YP_005047401.1 CDS Clocl_2930 NC_016627.1 3407769 3410327 R PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein; hypothetical protein complement(3407769..3410327) Clostridium clariflavum DSM 19732 11563346 YP_005047402.1 CDS Clocl_2931 NC_016627.1 3410383 3411543 R PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain complement(3410383..3411543) Clostridium clariflavum DSM 19732 11563347 YP_005047403.1 CDS Clocl_2932 NC_016627.1 3411561 3415223 R PFAM: Eco57I restriction endonuclease; Eco57I restriction endonuclease complement(3411561..3415223) Clostridium clariflavum DSM 19732 11563348 YP_005047404.1 CDS Clocl_2933 NC_016627.1 3415236 3418796 R hypothetical protein complement(3415236..3418796) Clostridium clariflavum DSM 19732 11563349 YP_005047405.1 CDS Clocl_2934 NC_016627.1 3418833 3419417 R PFAM: Domain of unknown function (DUF1788); hypothetical protein complement(3418833..3419417) Clostridium clariflavum DSM 19732 11563350 YP_005047406.1 CDS Clocl_2935 NC_016627.1 3419418 3420023 R PFAM: Putative inner membrane protein (DUF1819); hypothetical protein complement(3419418..3420023) Clostridium clariflavum DSM 19732 11563351 YP_005047407.1 CDS Clocl_2936 NC_016627.1 3420154 3421020 R PFAM: HNH endonuclease; putative restriction endonuclease complement(3420154..3421020) Clostridium clariflavum DSM 19732 11563352 YP_005047408.1 CDS Clocl_2937 NC_016627.1 3421758 3422405 R PFAM: LysE type translocator; putative threonine efflux protein complement(3421758..3422405) Clostridium clariflavum DSM 19732 11563353 YP_005047409.1 CDS Clocl_2938 NC_016627.1 3422658 3423989 R PFAM: Serine hydroxymethyltransferase; glycine/serine hydroxymethyltransferase complement(3422658..3423989) Clostridium clariflavum DSM 19732 11563354 YP_005047410.1 CDS Clocl_2939 NC_016627.1 3424357 3424989 R hypothetical protein complement(3424357..3424989) Clostridium clariflavum DSM 19732 11563355 YP_005047411.1 CDS Clocl_2941 NC_016627.1 3425449 3426030 R hypothetical protein complement(3425449..3426030) Clostridium clariflavum DSM 19732 11563357 YP_005047412.1 CDS Clocl_2942 NC_016627.1 3426152 3427324 R PFAM: Sodium/hydrogen exchanger family; NhaP-type Na+(K+)/H+ antiporter complement(3426152..3427324) Clostridium clariflavum DSM 19732 11563358 YP_005047413.1 CDS Clocl_2943 NC_016627.1 3427579 3429771 R hypothetical protein complement(3427579..3429771) Clostridium clariflavum DSM 19732 11563359 YP_005047414.1 CDS Clocl_2944 NC_016627.1 3429797 3434074 R PFAM: von Willebrand factor type A domain; S-layer homology domain; Mg-chelatase subunit ChlD complement(3429797..3434074) Clostridium clariflavum DSM 19732 11563360 YP_005047415.1 CDS Clocl_2946 NC_016627.1 3439038 3440777 R hypothetical protein complement(3439038..3440777) Clostridium clariflavum DSM 19732 11563362 YP_005047416.1 CDS Clocl_2948 NC_016627.1 3442524 3443408 R PFAM: Mu transposase, C-terminal; manually curated; Mu transposase, C-terminal complement(3442524..3443408) Clostridium clariflavum DSM 19732 11563364 YP_005047417.1 CDS Clocl_2949 NC_016627.1 3443423 3444688 R PFAM: Integrase core domain; integrase family protein complement(3443423..3444688) Clostridium clariflavum DSM 19732 11563365 YP_005047418.1 CDS Clocl_2950 NC_016627.1 3444685 3445530 R PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal; TnsA endonuclease complement(3444685..3445530) Clostridium clariflavum DSM 19732 11563366 YP_005047419.1 CDS Clocl_2951 NC_016627.1 3445836 3446051 D hypothetical protein 3445836..3446051 Clostridium clariflavum DSM 19732 11563367 YP_005047420.1 CDS Clocl_2952 NC_016627.1 3446095 3446964 R hypothetical protein complement(3446095..3446964) Clostridium clariflavum DSM 19732 11563368 YP_005047421.1 CDS Clocl_2953 NC_016627.1 3446961 3447755 R hypothetical protein complement(3446961..3447755) Clostridium clariflavum DSM 19732 11563369 YP_005047422.1 CDS Clocl_2954 NC_016627.1 3447769 3448143 R hypothetical protein complement(3447769..3448143) Clostridium clariflavum DSM 19732 11563370 YP_005047423.1 CDS Clocl_2957 NC_016627.1 3450437 3451213 D PFAM: IstB-like ATP binding protein; DNA replication protein 3450437..3451213 Clostridium clariflavum DSM 19732 11563373 YP_005047424.1 CDS Clocl_2959 NC_016627.1 3451798 3453087 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3451798..3453087 Clostridium clariflavum DSM 19732 11563375 YP_005047425.1 CDS Clocl_2961 NC_016627.1 3454657 3456048 D PFAM: Transposase DDE domain; transposase family protein 3454657..3456048 Clostridium clariflavum DSM 19732 11563377 YP_005047426.1 CDS Clocl_2962 NC_016627.1 3456694 3457923 R PFAM: Transposase, Mutator family; transposase complement(3456694..3457923) Clostridium clariflavum DSM 19732 11563378 YP_005047427.1 CDS Clocl_2964 NC_016627.1 3459603 3460820 R PFAM: Transposase, Mutator family; transposase complement(3459603..3460820) Clostridium clariflavum DSM 19732 11563380 YP_005047428.1 CDS Clocl_2965 NC_016627.1 3460900 3461169 R hypothetical protein complement(3460900..3461169) Clostridium clariflavum DSM 19732 11563381 YP_005047429.1 CDS Clocl_2966 NC_016627.1 3461174 3462082 R PFAM: StbA protein; actin-like ATPase involved in cell division complement(3461174..3462082) Clostridium clariflavum DSM 19732 11563382 YP_005047430.1 CDS Clocl_2967 NC_016627.1 3462343 3463965 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(3462343..3463965) Clostridium clariflavum DSM 19732 11563383 YP_005047431.1 CDS Clocl_2968 NC_016627.1 3464479 3464883 D PFAM: S23 ribosomal protein; S23 ribosomal protein 3464479..3464883 Clostridium clariflavum DSM 19732 11563384 YP_005047432.1 CDS Clocl_2969 NC_016627.1 3465180 3465743 R PFAM: Protein of unknown function (DUF2703); hypothetical protein complement(3465180..3465743) Clostridium clariflavum DSM 19732 11563385 YP_005047433.1 CDS Clocl_2970 NC_016627.1 3465857 3466084 R TIGRFAM: small redox-active disulfide protein 2; small redox-active disulfide protein 2 complement(3465857..3466084) Clostridium clariflavum DSM 19732 11563386 YP_005047434.1 CDS Clocl_2971 NC_016627.1 3466207 3467223 R PFAM: Predicted permease; manually curated; putative permease complement(3466207..3467223) Clostridium clariflavum DSM 19732 11563387 YP_005047435.1 CDS Clocl_2972 NC_016627.1 3467332 3467733 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase complement(3467332..3467733) Clostridium clariflavum DSM 19732 11563388 YP_005047436.1 CDS Clocl_2973 NC_016627.1 3467739 3468815 R PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein complement(3467739..3468815) Clostridium clariflavum DSM 19732 11563389 YP_005047437.1 CDS Clocl_2974 NC_016627.1 3469004 3469414 R PFAM: Bacterial regulatory protein, arsR family; manually curated; putative transcriptional regulator complement(3469004..3469414) Clostridium clariflavum DSM 19732 11563390 YP_005047438.1 CDS Clocl_2975 NC_016627.1 3469878 3470033 R hypothetical protein complement(3469878..3470033) Clostridium clariflavum DSM 19732 11563391 YP_005047439.1 CDS Clocl_2976 NC_016627.1 3470280 3471137 R hypothetical protein complement(3470280..3471137) Clostridium clariflavum DSM 19732 11563392 YP_005047440.1 CDS Clocl_2977 NC_016627.1 3471174 3471617 R PFAM: Protein of unknown function (DUF1232); hypothetical protein complement(3471174..3471617) Clostridium clariflavum DSM 19732 11563393 YP_005047441.1 CDS Clocl_2978 NC_016627.1 3471686 3472258 R PFAM: BFD-like [2Fe-2S] binding domain; BFD-like (2Fe-2S) protein complement(3471686..3472258) Clostridium clariflavum DSM 19732 11563394 YP_005047442.1 CDS Clocl_2979 NC_016627.1 3473129 3474952 R PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase complement(3473129..3474952) Clostridium clariflavum DSM 19732 11563395 YP_005047443.1 CDS Clocl_2980 NC_016627.1 3475796 3477190 R PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase complement(3475796..3477190) Clostridium clariflavum DSM 19732 11563396 YP_005047444.1 CDS Clocl_2981 NC_016627.1 3477532 3479118 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent dehydrogenase complement(3477532..3479118) Clostridium clariflavum DSM 19732 11563397 YP_005047445.1 CDS Clocl_2982 NC_016627.1 3479128 3480342 R PFAM: YbbR-like protein; hypothetical protein complement(3479128..3480342) Clostridium clariflavum DSM 19732 11563398 YP_005047446.1 CDS Clocl_2983 NC_016627.1 3480339 3481268 R PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; hypothetical protein complement(3480339..3481268) Clostridium clariflavum DSM 19732 11563399 YP_005047447.1 CDS Clocl_2984 NC_016627.1 3481482 3482372 R PFAM: Radical SAM superfamily; pyruvate-formate lyase-activating enzyme complement(3481482..3482372) Clostridium clariflavum DSM 19732 11563400 YP_005047448.1 CDS Clocl_2985 NC_016627.1 3482353 3483753 R PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family; manually curated; hypothetical protein complement(3482353..3483753) Clostridium clariflavum DSM 19732 11563401 YP_005047449.1 CDS Clocl_2987 NC_016627.1 3484655 3484813 R hypothetical protein complement(3484655..3484813) Clostridium clariflavum DSM 19732 11563402 YP_005047450.1 CDS Clocl_2988 NC_016627.1 3484818 3486968 R PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transporter FeoB complement(3484818..3486968) Clostridium clariflavum DSM 19732 11563403 YP_005047451.1 CDS Clocl_2989 NC_016627.1 3487132 3487353 R PFAM: FeoA domain; Fe2+ transport system protein A complement(3487132..3487353) Clostridium clariflavum DSM 19732 11563404 YP_005047452.1 CDS Clocl_2990 NC_016627.1 3487725 3488111 D PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; Mn-dependent transcriptional regulator 3487725..3488111 Clostridium clariflavum DSM 19732 11563405 YP_005047453.1 CDS Clocl_2991 NC_016627.1 3488285 3489403 R beta-lactamase class A complement(3488285..3489403) Clostridium clariflavum DSM 19732 11563406 YP_005047454.1 CDS Clocl_2992 NC_016627.1 3489475 3489804 R PFAM: Protein of unknown function (DUF970); hypothetical protein complement(3489475..3489804) Clostridium clariflavum DSM 19732 11563407 YP_005047455.1 CDS Clocl_2993 NC_016627.1 3489893 3491143 R PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase complement(3489893..3491143) Clostridium clariflavum DSM 19732 11563408 YP_005047456.1 CDS Clocl_2994 NC_016627.1 3491524 3491685 D hypothetical protein 3491524..3491685 Clostridium clariflavum DSM 19732 11563409 YP_005047457.1 CDS Clocl_2995 NC_016627.1 3491796 3492413 R PFAM: PilZ domain; PilZ domain-containing protein complement(3491796..3492413) Clostridium clariflavum DSM 19732 11563410 YP_005047458.1 CDS Clocl_2996 NC_016627.1 3492675 3493508 D PFAM: Uncharacterised ACR, YagE family COG1723; hypothetical protein 3492675..3493508 Clostridium clariflavum DSM 19732 11563411 YP_005047459.1 CDS Clocl_2997 NC_016627.1 3493522 3494385 D PFAM: Uncharacterised ACR, YagE family COG1723; hypothetical protein 3493522..3494385 Clostridium clariflavum DSM 19732 11563412 YP_005047460.1 CDS Clocl_2998 NC_016627.1 3494465 3494650 R PFAM: Small acid-soluble spore protein H family; TIGRFAM: small acid-soluble spore protein, H-type; small acid-soluble spore protein, H-type complement(3494465..3494650) Clostridium clariflavum DSM 19732 11563413 YP_005047461.1 CDS Clocl_2999 NC_016627.1 3495377 3495769 R hypothetical protein complement(3495377..3495769) Clostridium clariflavum DSM 19732 11563414 YP_005047462.1 CDS Clocl_3000 NC_016627.1 3496144 3497013 D hypothetical protein 3496144..3497013 Clostridium clariflavum DSM 19732 11563415 YP_005047463.1 CDS Clocl_3001 NC_016627.1 3497149 3499980 R PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein complement(3497149..3499980) Clostridium clariflavum DSM 19732 11563416 YP_005047464.1 CDS Clocl_3002 NC_016627.1 3500244 3501173 D PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 3500244..3501173 Clostridium clariflavum DSM 19732 11563417 YP_005047465.1 CDS Clocl_3004 NC_016627.1 3502878 3504275 R PFAM: Glucuronate isomerase; glucuronate isomerase complement(3502878..3504275) Clostridium clariflavum DSM 19732 11563419 YP_005047466.1 CDS Clocl_3005 NC_016627.1 3504557 3505411 R hypothetical protein complement(3504557..3505411) Clostridium clariflavum DSM 19732 11563420 YP_005047467.1 CDS Clocl_3006 NC_016627.1 3505769 3508774 R PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); S-layer homology domain; TIGRFAM: Listeria/Bacterioides repeat; beta-propeller domain-containing protein, methanol dehydrogenase complement(3505769..3508774) Clostridium clariflavum DSM 19732 11563421 YP_005047468.1 CDS Clocl_3009 NC_016627.1 3510715 3511278 R hypothetical protein complement(3510715..3511278) Clostridium clariflavum DSM 19732 11563424 YP_005047469.1 CDS Clocl_3010 NC_016627.1 3511655 3512965 R PFAM: Amidohydrolase family; cytosine deaminase complement(3511655..3512965) Clostridium clariflavum DSM 19732 11563425 YP_005047470.1 CDS Clocl_3011 NC_016627.1 3513060 3514304 R PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase complement(3513060..3514304) Clostridium clariflavum DSM 19732 11563426 YP_005047471.1 CDS Clocl_3012 NC_016627.1 3514349 3515173 R PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I complement(3514349..3515173) Clostridium clariflavum DSM 19732 11563427 YP_005047472.1 CDS Clocl_3013 NC_016627.1 3515553 3517091 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(3515553..3517091) Clostridium clariflavum DSM 19732 11563428 YP_005047473.1 CDS Clocl_3014 NC_016627.1 3517304 3518692 R PFAM: SpoVR like protein; hypothetical protein complement(3517304..3518692) Clostridium clariflavum DSM 19732 11563429 YP_005047474.1 CDS Clocl_3015 NC_016627.1 3518733 3519941 R PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH; sporulation protein YhbH complement(3518733..3519941) Clostridium clariflavum DSM 19732 11563430 YP_005047475.1 CDS Clocl_3016 NC_016627.1 3519984 3521912 R PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain; putative Ser protein kinase complement(3519984..3521912) Clostridium clariflavum DSM 19732 11563431 YP_005047476.1 CDS Clocl_3017 NC_016627.1 3522695 3524458 D hypothetical protein 3522695..3524458 Clostridium clariflavum DSM 19732 11563432 YP_005047477.1 CDS Clocl_3018 NC_016627.1 3524551 3525246 D hypothetical protein 3524551..3525246 Clostridium clariflavum DSM 19732 11563433 YP_005047478.1 CDS Clocl_3019 NC_016627.1 3525360 3526388 R manually curated; hypothetical protein complement(3525360..3526388) Clostridium clariflavum DSM 19732 11563434 YP_005047479.1 CDS Clocl_3020 NC_016627.1 3526783 3527157 R PFAM: Sulfite exporter TauE/SafE; putative permease complement(3526783..3527157) Clostridium clariflavum DSM 19732 11563435 YP_005047480.1 CDS Clocl_3021 NC_016627.1 3527171 3527524 R PFAM: Sulfite exporter TauE/SafE; putative permease complement(3527171..3527524) Clostridium clariflavum DSM 19732 11563436 YP_005047481.1 CDS Clocl_3022 NC_016627.1 3527850 3528149 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; hypothetical protein 3527850..3528149 Clostridium clariflavum DSM 19732 11563437 YP_005047482.1 CDS Clocl_3023 NC_016627.1 3528417 3530681 D PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA 3528417..3530681 Clostridium clariflavum DSM 19732 11563438 YP_005047483.1 CDS Clocl_3024 NC_016627.1 3530689 3531360 D PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 3530689..3531360 Clostridium clariflavum DSM 19732 11563439 YP_005047484.1 CDS Clocl_3025 NC_016627.1 3531361 3532461 D hypothetical protein 3531361..3532461 Clostridium clariflavum DSM 19732 11563440 YP_005047485.1 CDS Clocl_3026 NC_016627.1 3532929 3533795 R manually curated; hypothetical protein complement(3532929..3533795) Clostridium clariflavum DSM 19732 11563441 YP_005047486.1 CDS Clocl_3027 NC_016627.1 3534034 3534582 R hypothetical protein complement(3534034..3534582) Clostridium clariflavum DSM 19732 11563442 YP_005047487.1 CDS Clocl_3028 NC_016627.1 3535111 3543876 R PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family; cellobiose phosphorylase complement(3535111..3543876) Clostridium clariflavum DSM 19732 11563443 YP_005047488.1 CDS Clocl_3029 NC_016627.1 3544172 3546667 R PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; N-terminal ig-like domain of cellulase; dockerin-like protein complement(3544172..3546667) Clostridium clariflavum DSM 19732 11563444 YP_005047489.1 CDS Clocl_3030 NC_016627.1 3546975 3547778 R PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; manually curated; rRNA methylase, putative, group 3 complement(3546975..3547778) Clostridium clariflavum DSM 19732 11563445 YP_005047490.1 CDS Clocl_3031 NC_016627.1 3547895 3548248 R PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20P complement(3547895..3548248) Clostridium clariflavum DSM 19732 11563446 YP_005047491.1 CDS Clocl_3032 NC_016627.1 3548266 3548466 R PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 complement(3548266..3548466) Clostridium clariflavum DSM 19732 11563447 YP_005047492.1 CDS Clocl_3033 NC_016627.1 3548500 3549021 R PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 (bIF-3) complement(3548500..3549021) Clostridium clariflavum DSM 19732 11563448 YP_005047493.1 CDS Clocl_3034 NC_016627.1 3549303 3550364 R PFAM: Integrase core domain; transposase, IS30 family complement(3549303..3550364) Clostridium clariflavum DSM 19732 11563449 YP_005047494.1 CDS Clocl_3035 NC_016627.1 3550477 3551112 R PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; thymidylate synthase, flavin-dependent complement(3550477..3551112) Clostridium clariflavum DSM 19732 11563450 YP_005047495.1 CDS Clocl_3036 NC_016627.1 3551260 3553173 R PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase complement(3551260..3553173) Clostridium clariflavum DSM 19732 11563451 YP_005047496.1 CDS Clocl_3037 NC_016627.1 3553895 3555220 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 3553895..3555220 Clostridium clariflavum DSM 19732 11563452 YP_005047497.1 CDS Clocl_3038 NC_016627.1 3555405 3560030 D PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48; Cellulose binding domain-containing protein 3555405..3560030 Clostridium clariflavum DSM 19732 11563453 YP_005047498.1 CDS Clocl_3039 NC_016627.1 3560186 3562780 R PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; dolichyl-phosphate-mannose--protein O-mannosyl transferase complement(3560186..3562780) Clostridium clariflavum DSM 19732 11563454 YP_005047499.1 CDS Clocl_3040 NC_016627.1 3563457 3564209 R PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; competence protein ComEA-like protein with helix-hairpin-helix repeat region complement(3563457..3564209) Clostridium clariflavum DSM 19732 11563455 YP_005047500.1 CDS Clocl_3042 NC_016627.1 3566262 3567557 D PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; manually curated; D-alanyl-D-alanine carboxypeptidase 3566262..3567557 Clostridium clariflavum DSM 19732 11563457 YP_005047501.1 CDS Clocl_3044 NC_016627.1 3569592 3570818 D PFAM: Transposase, Mutator family; transposase 3569592..3570818 Clostridium clariflavum DSM 19732 11563459 YP_005047502.1 CDS Clocl_3045 NC_016627.1 3570860 3571105 R hypothetical protein complement(3570860..3571105) Clostridium clariflavum DSM 19732 11563460 YP_005047503.1 CDS Clocl_3047 NC_016627.1 3572683 3573912 D hypothetical protein 3572683..3573912 Clostridium clariflavum DSM 19732 11563462 YP_005047504.1 CDS Clocl_3049 NC_016627.1 3575045 3575500 D hypothetical protein 3575045..3575500 Clostridium clariflavum DSM 19732 11563464 YP_005047505.1 CDS Clocl_3050 NC_016627.1 3575523 3576461 D PFAM: ABC transporter; multidrug ABC transporter ATPase 3575523..3576461 Clostridium clariflavum DSM 19732 11563465 YP_005047506.1 CDS Clocl_3051 NC_016627.1 3576831 3577199 D hypothetical protein 3576831..3577199 Clostridium clariflavum DSM 19732 11563466 YP_005047507.1 CDS Clocl_3052 NC_016627.1 3577523 3578740 D PFAM: Transposase, Mutator family; transposase 3577523..3578740 Clostridium clariflavum DSM 19732 11563467 YP_005047508.1 CDS Clocl_3053 NC_016627.1 3579095 3579430 R PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap-like ribosome-associated protein complement(3579095..3579430) Clostridium clariflavum DSM 19732 11563468 YP_005047509.1 CDS Clocl_3054 NC_016627.1 3579473 3580057 R hypothetical protein complement(3579473..3580057) Clostridium clariflavum DSM 19732 11563469 YP_005047510.1 CDS Clocl_3055 NC_016627.1 3580134 3580721 R PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; putative HD superfamily hydrolase of NAD metabolism complement(3580134..3580721) Clostridium clariflavum DSM 19732 11563470 YP_005047511.1 CDS Clocl_3056 NC_016627.1 3580740 3581360 R PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate/nicotinamide nucleotide adenylyltransferase complement(3580740..3581360) Clostridium clariflavum DSM 19732 11563471 YP_005047512.1 CDS Clocl_3057 NC_016627.1 3581368 3582330 R PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); transcriptional regulator/sugar kinase complement(3581368..3582330) Clostridium clariflavum DSM 19732 11563472 YP_005047513.1 CDS Clocl_3058 NC_016627.1 3582485 3584314 R PFAM: Alpha-L-arabinofuranosidase B (ABFB); Dockerin type I repeat; Glycosyl hydrolases family 43; putative beta-xylosidase complement(3582485..3584314) Clostridium clariflavum DSM 19732 11563473 YP_005047514.1 CDS Clocl_3059 NC_016627.1 3584668 3586371 R PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter-binding protein complement(3584668..3586371) Clostridium clariflavum DSM 19732 11563474 YP_005047515.1 CDS Clocl_3061 NC_016627.1 3588399 3589391 D PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 3588399..3589391 Clostridium clariflavum DSM 19732 11563476 YP_005047516.1 CDS Clocl_3062 NC_016627.1 3589460 3589963 R hypothetical protein complement(3589460..3589963) Clostridium clariflavum DSM 19732 11563477 YP_005047517.1 CDS Clocl_3063 NC_016627.1 3590263 3590775 R hypothetical protein complement(3590263..3590775) Clostridium clariflavum DSM 19732 11563478 YP_005047518.1 CDS Clocl_3064 NC_016627.1 3590896 3591723 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase complement(3590896..3591723) Clostridium clariflavum DSM 19732 11563479 YP_005047519.1 CDS Clocl_3066 NC_016627.1 3592649 3593908 R PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase complement(3592649..3593908) Clostridium clariflavum DSM 19732 11563481 YP_005047520.1 CDS Clocl_3067 NC_016627.1 3593925 3595469 R PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3593925..3595469) Clostridium clariflavum DSM 19732 11563482 YP_005047521.1 CDS Clocl_3068 NC_016627.1 3595506 3596132 R PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase complement(3595506..3596132) Clostridium clariflavum DSM 19732 11563483 YP_005047522.1 CDS Clocl_3069 NC_016627.1 3596126 3597148 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylaminoimidazole synthetase complement(3596126..3597148) Clostridium clariflavum DSM 19732 11563484 YP_005047523.1 CDS Clocl_3070 NC_016627.1 3597198 3598664 R PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase complement(3597198..3598664) Clostridium clariflavum DSM 19732 11563485 YP_005047524.1 CDS Clocl_3071 NC_016627.1 3598678 3599193 R PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 5-(carboxyamino)imidazole ribonucleotide mutase complement(3598678..3599193) Clostridium clariflavum DSM 19732 11563486 YP_005047525.1 CDS Clocl_3072 NC_016627.1 3599304 3600695 R PFAM: Permease family; permease complement(3599304..3600695) Clostridium clariflavum DSM 19732 11563487 YP_005047526.1 CDS Clocl_3073 NC_016627.1 3600907 3601902 R PFAM: Membrane transport protein; putative permease complement(3600907..3601902) Clostridium clariflavum DSM 19732 11563488 YP_005047527.1 CDS Clocl_3074 NC_016627.1 3602430 3603449 R hypothetical protein complement(3602430..3603449) Clostridium clariflavum DSM 19732 11563489 YP_005047528.1 CDS Clocl_3075 NC_016627.1 3603717 3604172 R PFAM: Transposase IS200 like; transposase complement(3603717..3604172) Clostridium clariflavum DSM 19732 11563490 YP_005047529.1 CDS Clocl_3076 NC_016627.1 3604385 3604816 R hypothetical protein complement(3604385..3604816) Clostridium clariflavum DSM 19732 11563491 YP_005047530.1 CDS Clocl_3077 NC_016627.1 3605395 3606672 R PFAM: delta endotoxin, N-terminal domain; delta endotoxin-like protein complement(3605395..3606672) Clostridium clariflavum DSM 19732 11563492 YP_005047531.1 CDS Clocl_3078 NC_016627.1 3606676 3608064 R hypothetical protein complement(3606676..3608064) Clostridium clariflavum DSM 19732 11563493 YP_005047532.1 CDS Clocl_3080 NC_016627.1 3608473 3609816 R hypothetical protein complement(3608473..3609816) Clostridium clariflavum DSM 19732 11563495 YP_005047533.1 CDS Clocl_3081 NC_016627.1 3610119 3611180 D PFAM: Integrase core domain; transposase, IS30 family 3610119..3611180 Clostridium clariflavum DSM 19732 11563496 YP_005047534.1 CDS Clocl_3083 NC_016627.1 3612461 3614050 R PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; tRNA methyl transferase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase complement(3612461..3614050) Clostridium clariflavum DSM 19732 11563498 YP_005047535.1 CDS Clocl_3084 NC_016627.1 3614187 3615125 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; manually curated; radical SAM protein complement(3614187..3615125) Clostridium clariflavum DSM 19732 11563499 YP_005047536.1 CDS Clocl_3085 NC_016627.1 3615157 3616365 R PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein; hypothetical protein complement(3615157..3616365) Clostridium clariflavum DSM 19732 11563500 YP_005047537.1 CDS Clocl_3086 NC_016627.1 3616381 3617127 R PFAM: AIR carboxylase; NCAIR mutase-like protein complement(3616381..3617127) Clostridium clariflavum DSM 19732 11563501 YP_005047538.1 CDS Clocl_3087 NC_016627.1 3617195 3618064 R PFAM: Domain of unknown function (DUF2520); Rossmann-like domain; hypothetical protein complement(3617195..3618064) Clostridium clariflavum DSM 19732 11563502 YP_005047539.1 CDS Clocl_3088 NC_016627.1 3618474 3621455 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3618474..3621455 Clostridium clariflavum DSM 19732 11563503 YP_005047540.1 CDS Clocl_3089 NC_016627.1 3621575 3622561 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 complement(3621575..3622561) Clostridium clariflavum DSM 19732 11563504 YP_005047541.1 CDS Clocl_3090 NC_016627.1 3622865 3623539 R PFAM: Helix-turn-helix; putative transcriptional regulator complement(3622865..3623539) Clostridium clariflavum DSM 19732 11563505 YP_005047542.1 CDS Clocl_3091 NC_016627.1 3623828 3623980 D PFAM: Spo0E like sporulation regulatory protein; Spo0E like sporulation regulatory protein 3623828..3623980 Clostridium clariflavum DSM 19732 11563506 YP_005047543.1 CDS Clocl_3092 NC_016627.1 3624079 3624897 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase complement(3624079..3624897) Clostridium clariflavum DSM 19732 11563507 YP_005047544.1 CDS Clocl_3093 NC_016627.1 3624909 3626075 R PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase complement(3624909..3626075) Clostridium clariflavum DSM 19732 11563508 YP_005047545.1 CDS Clocl_3094 NC_016627.1 3626072 3626551 R PFAM: AsnC family; transcriptional regulator complement(3626072..3626551) Clostridium clariflavum DSM 19732 11563509 YP_005047546.1 CDS Clocl_3095 NC_016627.1 3627060 3627623 R PFAM: DivIVA protein; putative integral membrane protein complement(3627060..3627623) Clostridium clariflavum DSM 19732 11563510 YP_005047547.1 CDS Clocl_3096 NC_016627.1 3627858 3628190 R PFAM: Thioredoxin; TIGRFAM: thioredoxin; protein disulfide-isomerase domain; thioredoxin complement(3627858..3628190) Clostridium clariflavum DSM 19732 11563511 YP_005047548.1 CDS Clocl_3097 NC_016627.1 3628414 3628713 R PFAM: Uncharacterised BCR, COG1937; hypothetical protein complement(3628414..3628713) Clostridium clariflavum DSM 19732 11563512 YP_005047549.1 CDS Clocl_3098 NC_016627.1 3628871 3629272 R PFAM: Protein of unknown function (DUF1113); hypothetical protein complement(3628871..3629272) Clostridium clariflavum DSM 19732 11563513 YP_005047550.1 CDS Clocl_3099 NC_016627.1 3629458 3629997 D PFAM: Protein of unknown function (DUF3267); hypothetical protein 3629458..3629997 Clostridium clariflavum DSM 19732 11563514 YP_005047551.1 CDS Clocl_3100 NC_016627.1 3630627 3633194 D PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; alpha-glucan phosphorylase 3630627..3633194 Clostridium clariflavum DSM 19732 11563515 YP_005047552.1 CDS Clocl_3101 NC_016627.1 3633303 3634481 R TIGRFAM: TIGR00375 family protein; hypothetical protein complement(3633303..3634481) Clostridium clariflavum DSM 19732 11563516 YP_005047553.1 CDS Clocl_3102 NC_016627.1 3634933 3635943 D PFAM: HMGL-like; isopropylmalate/homocitrate/citramalate synthase 3634933..3635943 Clostridium clariflavum DSM 19732 11563517 YP_005047554.1 CDS Clocl_3103 NC_016627.1 3636729 3638306 D PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; CBM6-containing protein,glycosyl hydrolase family 11 3636729..3638306 Clostridium clariflavum DSM 19732 11563518 YP_005047555.1 CDS Clocl_3104 NC_016627.1 3638428 3639414 R PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; CoA-substrate-specific enzyme activase, putative complement(3638428..3639414) Clostridium clariflavum DSM 19732 11563519 YP_005047556.1 CDS Clocl_3105 NC_016627.1 3639383 3640498 R hypothetical protein complement(3639383..3640498) Clostridium clariflavum DSM 19732 11563520 YP_005047557.1 CDS Clocl_3106 NC_016627.1 3640470 3641462 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; CoA enzyme activase uncharacterised domain (DUF2229); hypothetical protein complement(3640470..3641462) Clostridium clariflavum DSM 19732 11563521 YP_005047558.1 CDS Clocl_3107 NC_016627.1 3641638 3642192 R PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I complement(3641638..3642192) Clostridium clariflavum DSM 19732 11563522 YP_005047559.1 CDS Clocl_3108 NC_016627.1 3642267 3643196 R PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; fructose-1,6-bisphosphate aldolase complement(3642267..3643196) Clostridium clariflavum DSM 19732 11563523 YP_005047560.1 CDS Clocl_3109 NC_016627.1 3643549 3644790 D PFAM: Phosphofructokinase; 6-phosphofructokinase 3643549..3644790 Clostridium clariflavum DSM 19732 11563524 YP_005047561.1 CDS Clocl_3110 NC_016627.1 3645105 3647339 D PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 3645105..3647339 Clostridium clariflavum DSM 19732 11563525 YP_005047562.1 CDS Clocl_3111 NC_016627.1 3647352 3648089 D PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; glycyl-radical enzyme activating protein family; pyruvate formate-lyase 1-activating enzyme 3647352..3648089 Clostridium clariflavum DSM 19732 11563526 YP_005047563.1 CDS Clocl_3112 NC_016627.1 3648122 3648502 R hypothetical protein complement(3648122..3648502) Clostridium clariflavum DSM 19732 11563527 YP_005047564.1 CDS Clocl_3113 NC_016627.1 3648573 3649811 R TIGRFAM: RNA polymerase sigma-I factor; hypothetical protein complement(3648573..3649811) Clostridium clariflavum DSM 19732 11563528 YP_005047565.1 CDS Clocl_3114 NC_016627.1 3650072 3650629 R hypothetical protein complement(3650072..3650629) Clostridium clariflavum DSM 19732 11563529 YP_005047566.1 CDS Clocl_3115 NC_016627.1 3650775 3651278 R hypothetical protein complement(3650775..3651278) Clostridium clariflavum DSM 19732 11563530 YP_005047567.1 CDS Clocl_3116 NC_016627.1 3651289 3651738 R hypothetical protein complement(3651289..3651738) Clostridium clariflavum DSM 19732 11563531 YP_005047568.1 CDS Clocl_3117 NC_016627.1 3651916 3652122 R hypothetical protein complement(3651916..3652122) Clostridium clariflavum DSM 19732 11563532 YP_005047569.1 CDS Clocl_3118 NC_016627.1 3652205 3653089 R hypothetical protein complement(3652205..3653089) Clostridium clariflavum DSM 19732 11563533 YP_005047570.1 CDS Clocl_3119 NC_016627.1 3653089 3654060 R hypothetical protein complement(3653089..3654060) Clostridium clariflavum DSM 19732 11563534 YP_005047571.1 CDS Clocl_3120 NC_016627.1 3654038 3655501 R PFAM: Type II/IV secretion system protein; Flp pilus assembly protein, ATPase CpaF complement(3654038..3655501) Clostridium clariflavum DSM 19732 11563535 YP_005047572.1 CDS Clocl_3121 NC_016627.1 3655525 3656352 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase complement(3655525..3656352) Clostridium clariflavum DSM 19732 11563536 YP_005047573.1 CDS Clocl_3122 NC_016627.1 3656328 3657215 R hypothetical protein complement(3656328..3657215) Clostridium clariflavum DSM 19732 11563537 YP_005047574.1 CDS Clocl_3123 NC_016627.1 3657284 3658621 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein complement(3657284..3658621) Clostridium clariflavum DSM 19732 11563538 YP_005047575.1 CDS Clocl_3124 NC_016627.1 3658785 3659432 R PFAM: PilZ domain; PilZ domain-containing protein complement(3658785..3659432) Clostridium clariflavum DSM 19732 11563539 YP_005047576.1 CDS Clocl_3125 NC_016627.1 3659711 3660460 D PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase 3659711..3660460 Clostridium clariflavum DSM 19732 11563540 YP_005047577.1 CDS Clocl_3126 NC_016627.1 3660568 3661593 R PFAM: 37-kD nucleoid-associated bacterial protein; nucleoid-associated protein complement(3660568..3661593) Clostridium clariflavum DSM 19732 11563541 YP_005047578.1 CDS Clocl_3127 NC_016627.1 3661719 3664082 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); chaperone ATPase complement(3661719..3664082) Clostridium clariflavum DSM 19732 11563542 YP_005047579.1 CDS Clocl_3128 NC_016627.1 3664552 3667383 R PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; Excinuclease ABC subunit A complement(3664552..3667383) Clostridium clariflavum DSM 19732 11563543 YP_005047580.1 CDS Clocl_3129 NC_016627.1 3667482 3669464 R PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; Excinuclease ABC subunit B complement(3667482..3669464) Clostridium clariflavum DSM 19732 11563544 YP_005047581.1 CDS Clocl_3130 NC_016627.1 3669697 3670776 R hypothetical protein complement(3669697..3670776) Clostridium clariflavum DSM 19732 11563545 YP_005047582.1 CDS Clocl_3131 NC_016627.1 3671029 3674490 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; NB-ARC domain; putative ATPase 3671029..3674490 Clostridium clariflavum DSM 19732 11563546 YP_005047583.1 CDS Clocl_3132 NC_016627.1 3674581 3675816 D PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; beta-mannanase 3674581..3675816 Clostridium clariflavum DSM 19732 11563547 YP_005047584.1 CDS Clocl_3133 NC_016627.1 3676094 3676618 R hypothetical protein complement(3676094..3676618) Clostridium clariflavum DSM 19732 11563548 YP_005047585.1 CDS Clocl_3134 NC_016627.1 3676756 3677208 R hypothetical protein complement(3676756..3677208) Clostridium clariflavum DSM 19732 11563549 YP_005047586.1 CDS Clocl_3135 NC_016627.1 3677256 3678746 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(3677256..3678746) Clostridium clariflavum DSM 19732 11563550 YP_005047587.1 CDS Clocl_3136 NC_016627.1 3678736 3679431 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(3678736..3679431) Clostridium clariflavum DSM 19732 11563551 YP_005047588.1 CDS Clocl_3137 NC_016627.1 3679755 3680201 D hypothetical protein 3679755..3680201 Clostridium clariflavum DSM 19732 11563552 YP_005047589.1 CDS Clocl_3138 NC_016627.1 3680202 3681038 R hypothetical protein complement(3680202..3681038) Clostridium clariflavum DSM 19732 11563553 YP_005047590.1 CDS Clocl_3139 NC_016627.1 3681186 3682031 R PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein complement(3681186..3682031) Clostridium clariflavum DSM 19732 11563554 YP_005047591.1 CDS Clocl_3140 NC_016627.1 3682028 3683311 R PFAM: ATPase family associated with various cellular activities (AAA); Tetratricopeptide repeat; AAA ATPase complement(3682028..3683311) Clostridium clariflavum DSM 19732 11563555 YP_005047592.1 CDS Clocl_3141 NC_016627.1 3683357 3683701 R hypothetical protein complement(3683357..3683701) Clostridium clariflavum DSM 19732 11563556 YP_005047593.1 CDS Clocl_3142 NC_016627.1 3683940 3684395 R hypothetical protein complement(3683940..3684395) Clostridium clariflavum DSM 19732 11563557 YP_005047594.1 CDS Clocl_3144 NC_016627.1 3685163 3685774 R PFAM: Pentapeptide repeats (8 copies); putative low-complexity protein complement(3685163..3685774) Clostridium clariflavum DSM 19732 11563559 YP_005047595.1 CDS Clocl_3145 NC_016627.1 3686301 3686732 R hypothetical protein complement(3686301..3686732) Clostridium clariflavum DSM 19732 11563560 YP_005047596.1 CDS Clocl_3147 NC_016627.1 3687835 3688659 R PFAM: Dockerin type I repeat; dockerin-like protein complement(3687835..3688659) Clostridium clariflavum DSM 19732 11563562 YP_005047597.1 CDS Clocl_3148 NC_016627.1 3688973 3689947 R hypothetical protein complement(3688973..3689947) Clostridium clariflavum DSM 19732 11563563 YP_005047598.1 CDS Clocl_3149 NC_016627.1 3689931 3690995 R hypothetical protein complement(3689931..3690995) Clostridium clariflavum DSM 19732 11563564 YP_005047599.1 CDS Clocl_3150 NC_016627.1 3691008 3692318 R PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase complement(3691008..3692318) Clostridium clariflavum DSM 19732 11563565 YP_005047600.1 CDS Clocl_3151 NC_016627.1 3692402 3693682 R PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase complement(3692402..3693682) Clostridium clariflavum DSM 19732 11563566 YP_005047601.1 CDS Clocl_3152 NC_016627.1 3693783 3695009 R PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Reverse transcriptase (RNA-dependent DNA polymerase) complement(3693783..3695009) Clostridium clariflavum DSM 19732 11563567 YP_005047602.1 CDS Clocl_3153 NC_016627.1 3695302 3696660 R PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase complement(3695302..3696660) Clostridium clariflavum DSM 19732 11563568 YP_005047603.1 CDS Clocl_3154 NC_016627.1 3696971 3698299 R PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase complement(3696971..3698299) Clostridium clariflavum DSM 19732 11563569 YP_005047604.1 CDS Clocl_3155 NC_016627.1 3698722 3703155 R manually curated; chromosome segregation ATPase complement(3698722..3703155) Clostridium clariflavum DSM 19732 11563570 YP_005047605.1 CDS Clocl_3156 NC_016627.1 3703196 3703909 R hypothetical protein complement(3703196..3703909) Clostridium clariflavum DSM 19732 11563571 YP_005047606.1 CDS Clocl_3157 NC_016627.1 3703909 3705483 R hypothetical protein complement(3703909..3705483) Clostridium clariflavum DSM 19732 11563572 YP_005047607.1 CDS Clocl_3158 NC_016627.1 3705461 3706507 R PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); hypothetical protein complement(3705461..3706507) Clostridium clariflavum DSM 19732 11563573 YP_005047608.1 CDS Clocl_3159 NC_016627.1 3706680 3706820 R hypothetical protein complement(3706680..3706820) Clostridium clariflavum DSM 19732 11563574 YP_005047609.1 CDS Clocl_3161 NC_016627.1 3706970 3708214 R PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase complement(3706970..3708214) Clostridium clariflavum DSM 19732 11563576 YP_005047610.1 CDS Clocl_3163 NC_016627.1 3710365 3711093 D PFAM: IstB-like ATP binding protein; DNA replication protein 3710365..3711093 Clostridium clariflavum DSM 19732 11563578 YP_005047611.1 CDS Clocl_3164 NC_016627.1 3711320 3711673 D PFAM: Transposase; Transposase 3711320..3711673 Clostridium clariflavum DSM 19732 11563579 YP_005047612.1 CDS Clocl_3165 NC_016627.1 3711670 3712023 D PFAM: IS66 Orf2 like protein; transposase 3711670..3712023 Clostridium clariflavum DSM 19732 11563580 YP_005047613.1 CDS Clocl_3167 NC_016627.1 3713694 3713978 D hypothetical protein 3713694..3713978 Clostridium clariflavum DSM 19732 11563582 YP_005047614.1 CDS Clocl_3168 NC_016627.1 3714292 3714543 R hypothetical protein complement(3714292..3714543) Clostridium clariflavum DSM 19732 11563583 YP_005047615.1 CDS Clocl_3169 NC_016627.1 3715180 3717897 R PFAM: Putative peptidoglycan binding domain; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein complement(3715180..3717897) Clostridium clariflavum DSM 19732 11563584 YP_005047616.1 CDS Clocl_3170 NC_016627.1 3717988 3718272 R hypothetical protein complement(3717988..3718272) Clostridium clariflavum DSM 19732 11563585 YP_005047617.1 CDS Clocl_3171 NC_016627.1 3718395 3719426 D PFAM: Transposase IS66 family; Insertion element protein; transposase 3718395..3719426 Clostridium clariflavum DSM 19732 11563586 YP_005047618.1 CDS Clocl_3172 NC_016627.1 3719605 3720909 R PFAM: Transposase IS66 family; transposase complement(3719605..3720909) Clostridium clariflavum DSM 19732 11563587 YP_005047619.1 CDS Clocl_3173 NC_016627.1 3721239 3721592 R PFAM: IS66 Orf2 like protein; transposase complement(3721239..3721592) Clostridium clariflavum DSM 19732 11563588 YP_005047620.1 CDS Clocl_3174 NC_016627.1 3721589 3721942 R PFAM: Transposase; Transposase complement(3721589..3721942) Clostridium clariflavum DSM 19732 11563589 YP_005047621.1 CDS Clocl_3175 NC_016627.1 3722404 3723621 R PFAM: Transposase, Mutator family; transposase complement(3722404..3723621) Clostridium clariflavum DSM 19732 11563590 YP_005047622.1 CDS Clocl_3176 NC_016627.1 3723744 3725114 R hypothetical protein complement(3723744..3725114) Clostridium clariflavum DSM 19732 11563591 YP_005047623.1 CDS Clocl_3177 NC_016627.1 3725379 3726719 R PFAM: Predicted permease; lipoprotein release ABC transporter permease complement(3725379..3726719) Clostridium clariflavum DSM 19732 11563592 YP_005047624.1 CDS Clocl_3178 NC_016627.1 3726764 3727942 R PFAM: Predicted permease; manually curated; lipoprotein release ABC transporter permease complement(3726764..3727942) Clostridium clariflavum DSM 19732 11563593 YP_005047625.1 CDS Clocl_3179 NC_016627.1 3727932 3728600 R PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase complement(3727932..3728600) Clostridium clariflavum DSM 19732 11563594 YP_005047626.1 CDS Clocl_3180 NC_016627.1 3728602 3729129 R hypothetical protein complement(3728602..3729129) Clostridium clariflavum DSM 19732 11563595 YP_005047627.1 CDS Clocl_3181 NC_016627.1 3729262 3729534 R manually curated; hypothetical protein complement(3729262..3729534) Clostridium clariflavum DSM 19732 11563596 YP_005047628.1 CDS Clocl_3182 NC_016627.1 3730388 3730525 D hypothetical protein 3730388..3730525 Clostridium clariflavum DSM 19732 11563597 YP_005047629.1 CDS Clocl_3183 NC_016627.1 3730686 3731510 D PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3730686..3731510 Clostridium clariflavum DSM 19732 11563598 YP_005047630.1 CDS Clocl_3184 NC_016627.1 3731739 3732512 D PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 3731739..3732512 Clostridium clariflavum DSM 19732 11563599 YP_005047631.1 CDS Clocl_3185 NC_016627.1 3732702 3734150 R PFAM: Putative transposase; transposase complement(3732702..3734150) Clostridium clariflavum DSM 19732 11563600 YP_005047632.1 CDS Clocl_3186 NC_016627.1 3734185 3735405 D PFAM: Transglutaminase-like superfamily; transglutaminase 3734185..3735405 Clostridium clariflavum DSM 19732 11563601 YP_005047633.1 CDS Clocl_3187 NC_016627.1 3735604 3737103 R hypothetical protein complement(3735604..3737103) Clostridium clariflavum DSM 19732 11563602 YP_005047634.1 CDS Clocl_3188 NC_016627.1 3737376 3737696 D hypothetical protein 3737376..3737696 Clostridium clariflavum DSM 19732 11563603 YP_005047635.1 CDS Clocl_3189 NC_016627.1 3738095 3738265 D hypothetical protein 3738095..3738265 Clostridium clariflavum DSM 19732 11563604 YP_005047636.1 CDS Clocl_3190 NC_016627.1 3738308 3738601 D PFAM: Transposase; transposase 3738308..3738601 Clostridium clariflavum DSM 19732 11563605 YP_005047637.1 CDS Clocl_3191 NC_016627.1 3738561 3739460 D PFAM: Integrase core domain; transposase 3738561..3739460 Clostridium clariflavum DSM 19732 11563606 YP_005047638.1 CDS Clocl_3192 NC_016627.1 3739652 3740776 R hypothetical protein complement(3739652..3740776) Clostridium clariflavum DSM 19732 11563607 YP_005047639.1 CDS Clocl_3197 NC_016627.1 3745418 3745594 R hypothetical protein complement(3745418..3745594) Clostridium clariflavum DSM 19732 11563612 YP_005047640.1 CDS Clocl_3199 NC_016627.1 3747043 3747615 R hypothetical protein complement(3747043..3747615) Clostridium clariflavum DSM 19732 11563614 YP_005047641.1 CDS Clocl_3200 NC_016627.1 3747683 3747976 R hypothetical protein complement(3747683..3747976) Clostridium clariflavum DSM 19732 11563615 YP_005047642.1 CDS Clocl_3201 NC_016627.1 3748088 3748372 R hypothetical protein complement(3748088..3748372) Clostridium clariflavum DSM 19732 11563616 YP_005047643.1 CDS Clocl_3203 NC_016627.1 3750008 3750361 R PFAM: IS66 Orf2 like protein; transposase complement(3750008..3750361) Clostridium clariflavum DSM 19732 11563618 YP_005047644.1 CDS Clocl_3204 NC_016627.1 3750358 3750711 R PFAM: Transposase; Transposase complement(3750358..3750711) Clostridium clariflavum DSM 19732 11563619 YP_005047645.1 CDS Clocl_3205 NC_016627.1 3751006 3751494 R hypothetical protein complement(3751006..3751494) Clostridium clariflavum DSM 19732 11563620 YP_005047646.1 CDS Clocl_3206 NC_016627.1 3751499 3752302 R hypothetical protein complement(3751499..3752302) Clostridium clariflavum DSM 19732 11563621 YP_005047647.1 CDS Clocl_3207 NC_016627.1 3752765 3753199 R hypothetical protein complement(3752765..3753199) Clostridium clariflavum DSM 19732 11563622 YP_005047648.1 CDS Clocl_3208 NC_016627.1 3753233 3753781 R PFAM: Dockerin type I repeat; dockerin-like protein complement(3753233..3753781) Clostridium clariflavum DSM 19732 11563623 YP_005047649.1 CDS Clocl_3209 NC_016627.1 3754234 3754593 R manually curated; hypothetical protein complement(3754234..3754593) Clostridium clariflavum DSM 19732 11563624 YP_005047650.1 CDS Clocl_3210 NC_016627.1 3754654 3755187 R PFAM: Copper/zinc superoxide dismutase (SODC); Cu/Zn superoxide dismutase complement(3754654..3755187) Clostridium clariflavum DSM 19732 11563625 YP_005047651.1 CDS Clocl_3211 NC_016627.1 3755447 3757630 R PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit complement(3755447..3757630) Clostridium clariflavum DSM 19732 11563626 YP_005047652.1 CDS Clocl_3212 NC_016627.1 3757696 3759675 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit complement(3757696..3759675) Clostridium clariflavum DSM 19732 11563627 YP_005047653.1 CDS Clocl_3213 NC_016627.1 3760191 3760673 D hypothetical protein 3760191..3760673 Clostridium clariflavum DSM 19732 11563628 YP_005047654.1 CDS Clocl_3214 NC_016627.1 3760689 3761132 R hypothetical protein complement(3760689..3761132) Clostridium clariflavum DSM 19732 11563629 YP_005047655.1 CDS Clocl_3215 NC_016627.1 3761135 3761890 R PFAM: Protein of unknown function (DUF1212); hypothetical protein complement(3761135..3761890) Clostridium clariflavum DSM 19732 11563630 YP_005047656.1 CDS Clocl_3216 NC_016627.1 3762136 3762747 D PFAM: Cysteine-rich secretory protein family; LysM domain; TIGRFAM: spore coat assembly protein SafA; uncharacterized protein, YkwD family; spore coat assembly protein SafA/uncharacterized protein, YkwD family 3762136..3762747 Clostridium clariflavum DSM 19732 11563631 YP_005047657.1 CDS Clocl_3217 NC_016627.1 3762843 3764372 R PFAM: Bacterial SH3 domain; L,D-transpeptidase catalytic domain; manually curated; hypothetical protein complement(3762843..3764372) Clostridium clariflavum DSM 19732 11563632 YP_005047658.1 CDS Clocl_3218 NC_016627.1 3764943 3765128 R hypothetical protein complement(3764943..3765128) Clostridium clariflavum DSM 19732 11563633 YP_005047659.1 CDS Clocl_3219 NC_016627.1 3765311 3766336 R hypothetical protein complement(3765311..3766336) Clostridium clariflavum DSM 19732 11563634 YP_005047660.1 CDS Clocl_3220 NC_016627.1 3766459 3767553 R PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease); spore germination protein, amino acid permease complement(3766459..3767553) Clostridium clariflavum DSM 19732 11563635 YP_005047661.1 CDS Clocl_3221 NC_016627.1 3767561 3767770 R hypothetical protein complement(3767561..3767770) Clostridium clariflavum DSM 19732 11563636 YP_005047662.1 CDS Clocl_3222 NC_016627.1 3767773 3768924 R PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family; germination protein, Ger(X)C family complement(3767773..3768924) Clostridium clariflavum DSM 19732 11563637 YP_005047663.1 CDS Clocl_3223 NC_016627.1 3768926 3770509 R PFAM: Bacillus/Clostridium GerA spore germination protein; spore germination protein, GerA family complement(3768926..3770509) Clostridium clariflavum DSM 19732 11563638 YP_005047664.1 CDS Clocl_3224 NC_016627.1 3770886 3772001 D PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, Methanosarcina type; phosphoserine aminotransferase 3770886..3772001 Clostridium clariflavum DSM 19732 11563639 YP_005047665.1 CDS Clocl_3225 NC_016627.1 3772134 3772682 R PFAM: BioY family; hypothetical protein complement(3772134..3772682) Clostridium clariflavum DSM 19732 11563640 YP_005047666.1 CDS Clocl_3226 NC_016627.1 3772881 3773426 R PFAM: Nitroreductase family; nitroreductase complement(3772881..3773426) Clostridium clariflavum DSM 19732 11563641 YP_005047667.1 CDS Clocl_3227 NC_016627.1 3773727 3774494 D PFAM: short chain dehydrogenase; dehydrogenase 3773727..3774494 Clostridium clariflavum DSM 19732 11563642 YP_005047668.1 CDS Clocl_3228 NC_016627.1 3774621 3775436 R hypothetical protein complement(3774621..3775436) Clostridium clariflavum DSM 19732 11563643 YP_005047669.1 CDS Clocl_3229 NC_016627.1 3775650 3776258 D PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; putative protein-S-isoprenylcysteine methyltransferase 3775650..3776258 Clostridium clariflavum DSM 19732 11563644 YP_005047670.1 CDS Clocl_3230 NC_016627.1 3776418 3776882 R hypothetical protein complement(3776418..3776882) Clostridium clariflavum DSM 19732 11563645 YP_005047671.1 CDS Clocl_3232 NC_016627.1 3778849 3779307 D hypothetical protein 3778849..3779307 Clostridium clariflavum DSM 19732 11563647 YP_005047672.1 CDS Clocl_3233 NC_016627.1 3779335 3779934 D hypothetical protein 3779335..3779934 Clostridium clariflavum DSM 19732 11563648 YP_005047673.1 CDS Clocl_3234 NC_016627.1 3780282 3780917 D PFAM: ubiE/COQ5 methyltransferase family; methylase involved in ubiquinone/menaquinone biosynthesis 3780282..3780917 Clostridium clariflavum DSM 19732 11563649 YP_005047674.1 CDS Clocl_3235 NC_016627.1 3781163 3781519 R PFAM: Endoribonuclease L-PSP; putative translation initiation inhibitor, yjgF family complement(3781163..3781519) Clostridium clariflavum DSM 19732 11563650 YP_005047675.1 CDS Clocl_3236 NC_016627.1 3782111 3782548 D hypothetical protein 3782111..3782548 Clostridium clariflavum DSM 19732 11563651 YP_005047676.1 CDS Clocl_3237 NC_016627.1 3783183 3784472 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(3783183..3784472) Clostridium clariflavum DSM 19732 11563652 YP_005047677.1 CDS Clocl_3238 NC_016627.1 3784891 3786933 D PFAM: Protein of unknown function, DUF255; thioredoxin domain-containing protein 3784891..3786933 Clostridium clariflavum DSM 19732 11563653 YP_005047678.1 CDS Clocl_3239 NC_016627.1 3787064 3788545 R PFAM: Glycosyl hydrolases family 18; Dockerin type I repeat; chitinase complement(3787064..3788545) Clostridium clariflavum DSM 19732 11563654 YP_005047679.1 CDS Clocl_3240 NC_016627.1 3788668 3791022 R PFAM: DEAD_2; DNA helicase, Rad3 complement(3788668..3791022) Clostridium clariflavum DSM 19732 11563655 YP_005047680.1 CDS Clocl_3241 NC_016627.1 3791210 3791380 R PFAM: Domain of Unknown Function (DUF1540); hypothetical protein complement(3791210..3791380) Clostridium clariflavum DSM 19732 11563656 YP_005047681.1 CDS Clocl_3242 NC_016627.1 3791624 3793801 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal-translocating P-type ATPase complement(3791624..3793801) Clostridium clariflavum DSM 19732 11563657 YP_005047682.1 CDS Clocl_3243 NC_016627.1 3793794 3794153 R PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator complement(3793794..3794153) Clostridium clariflavum DSM 19732 11563658 YP_005047683.1 CDS Clocl_3244 NC_016627.1 3794253 3795557 R PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase complement(3794253..3795557) Clostridium clariflavum DSM 19732 11563659 YP_005047684.1 CDS Clocl_3245 NC_016627.1 3795882 3797432 D PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated; diguanylate cyclase domain-containing protein 3795882..3797432 Clostridium clariflavum DSM 19732 11563660 YP_005047685.1 CDS Clocl_3246 NC_016627.1 3797631 3799109 R PFAM: L-fucose isomerase, C-terminal domain; L-fucose isomerase family protein complement(3797631..3799109) Clostridium clariflavum DSM 19732 11563661 YP_005047686.1 CDS Clocl_3247 NC_016627.1 3799555 3801747 R PFAM: S-layer homology domain; Uncharacterised BCR, COG1649; hypothetical protein complement(3799555..3801747) Clostridium clariflavum DSM 19732 11563662 YP_005047687.1 CDS Clocl_3248 NC_016627.1 3802022 3804547 R PFAM: Copper amine oxidase N-terminal domain; Regulator of chromosome condensation (RCC1) repeat; copper amine oxidase family protein complement(3802022..3804547) Clostridium clariflavum DSM 19732 11563663 YP_005047688.1 CDS Clocl_3249 NC_016627.1 3804693 3805196 R hypothetical protein complement(3804693..3805196) Clostridium clariflavum DSM 19732 11563664 YP_005047689.1 CDS Clocl_3250 NC_016627.1 3805336 3806097 R ferredoxin complement(3805336..3806097) Clostridium clariflavum DSM 19732 11563665 YP_005047690.1 CDS Clocl_3251 NC_016627.1 3806143 3806505 R PFAM: Domain of unknown function (DUF307); hypothetical protein complement(3806143..3806505) Clostridium clariflavum DSM 19732 11563666 YP_005047691.1 CDS Clocl_3252 NC_016627.1 3806594 3807010 R PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme complement(3806594..3807010) Clostridium clariflavum DSM 19732 11563667 YP_005047692.1 CDS Clocl_3253 NC_016627.1 3807397 3809640 R PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; thioredoxin domain-containing protein complement(3807397..3809640) Clostridium clariflavum DSM 19732 11563668 YP_005047693.1 CDS Clocl_3254 NC_016627.1 3810084 3810398 D PFAM: Late competence development protein ComFB; Late competence development protein ComFB 3810084..3810398 Clostridium clariflavum DSM 19732 11563669 YP_005047694.1 CDS Clocl_3255 NC_016627.1 3810674 3812284 D PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; dockerin-like protein 3810674..3812284 Clostridium clariflavum DSM 19732 11563670 YP_005047695.1 CDS Clocl_3256 NC_016627.1 3812472 3813041 R manually curated; hypothetical protein complement(3812472..3813041) Clostridium clariflavum DSM 19732 11563671 YP_005047696.1 CDS Clocl_3257 NC_016627.1 3813216 3814181 R PFAM: Domain of unknown function (DUF1835); Protein of unknown function; hypothetical protein complement(3813216..3814181) Clostridium clariflavum DSM 19732 11563672 YP_005047697.1 CDS Clocl_3258 NC_016627.1 3814274 3815542 R PFAM: YibE/F-like protein; putative multitransmembrane protein complement(3814274..3815542) Clostridium clariflavum DSM 19732 11563673 YP_005047698.1 CDS Clocl_3259 NC_016627.1 3815690 3817009 R PFAM: Major Facilitator Superfamily; manually curated; Major Facilitator Superfamily transporter complement(3815690..3817009) Clostridium clariflavum DSM 19732 11563674 YP_005047699.1 CDS Clocl_3260 NC_016627.1 3817221 3817898 D PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; hypothetical protein 3817221..3817898 Clostridium clariflavum DSM 19732 11563675 YP_005047700.1 CDS Clocl_3261 NC_016627.1 3817979 3818785 R manually curated; hypothetical protein complement(3817979..3818785) Clostridium clariflavum DSM 19732 11563676 YP_005047701.1 CDS Clocl_3262 NC_016627.1 3819078 3821375 R PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase class II complement(3819078..3821375) Clostridium clariflavum DSM 19732 11563677 YP_005047702.1 CDS Clocl_3263 NC_016627.1 3821678 3822931 R PFAM: Uncharacterised BCR, COG1649; hypothetical protein complement(3821678..3822931) Clostridium clariflavum DSM 19732 11563678 YP_005047703.1 CDS Clocl_3269 NC_016627.1 3829680 3830276 R PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; uracil-DNA glycosylase, family 4 complement(3829680..3830276) Clostridium clariflavum DSM 19732 11563684 YP_005047704.1 CDS Clocl_3270 NC_016627.1 3830255 3830824 R PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; uracil-DNA glycosylase, family 4 complement(3830255..3830824) Clostridium clariflavum DSM 19732 11563685 YP_005047705.1 CDS Clocl_3271 NC_016627.1 3830830 3831459 R PFAM: Radical SAM superfamily; TIGRFAM: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, clostridial; organic radical activating enzyme complement(3830830..3831459) Clostridium clariflavum DSM 19732 11563686 YP_005047706.1 CDS Clocl_3272 NC_016627.1 3831567 3831953 R PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD complement(3831567..3831953) Clostridium clariflavum DSM 19732 11563687 YP_005047707.1 CDS Clocl_3273 NC_016627.1 3832080 3832769 R PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; preQ(0) biosynthesis protein QueC complement(3832080..3832769) Clostridium clariflavum DSM 19732 11563688 YP_005047708.1 CDS Clocl_3274 NC_016627.1 3832846 3833625 R PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; CoA-substrate-specific enzyme activase, putative complement(3832846..3833625) Clostridium clariflavum DSM 19732 11563689 YP_005047709.1 CDS Clocl_3275 NC_016627.1 3833649 3834632 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB complement(3833649..3834632) Clostridium clariflavum DSM 19732 11563690 YP_005047710.1 CDS Clocl_3276 NC_016627.1 3834967 3835959 R PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); putative membrane-bound metal-dependent hydrolase complement(3834967..3835959) Clostridium clariflavum DSM 19732 11563691 YP_005047711.1 CDS Clocl_3277 NC_016627.1 3836253 3837161 R PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; cell envelope-related function transcriptional attenuator common domain-containing protein complement(3836253..3837161) Clostridium clariflavum DSM 19732 11563692 YP_005047712.1 CDS Clocl_3278 NC_016627.1 3837360 3838595 R PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; LL-diaminopimelate aminotransferase apoenzyme complement(3837360..3838595) Clostridium clariflavum DSM 19732 11563693 YP_005047713.1 CDS Clocl_3279 NC_016627.1 3838772 3839605 R PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(3838772..3839605) Clostridium clariflavum DSM 19732 11563694 YP_005047714.1 CDS Clocl_3280 NC_016627.1 3839880 3840740 D hypothetical protein 3839880..3840740 Clostridium clariflavum DSM 19732 11563695 YP_005047715.1 CDS Clocl_3281 NC_016627.1 3840813 3842768 D PFAM: Protein of unknown function (DUF2029); putative integral membrane protein 3840813..3842768 Clostridium clariflavum DSM 19732 11563696 YP_005047716.1 CDS Clocl_3282 NC_016627.1 3842795 3845665 D PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; dolichyl-phosphate-mannose--protein O-mannosyl transferase 3842795..3845665 Clostridium clariflavum DSM 19732 11563697 YP_005047717.1 CDS Clocl_3283 NC_016627.1 3845688 3846662 D PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 3845688..3846662 Clostridium clariflavum DSM 19732 11563698 YP_005047718.1 CDS Clocl_3289 NC_016627.1 3848463 3849734 R PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase complement(3848463..3849734) Clostridium clariflavum DSM 19732 11563704 YP_005047719.1 CDS Clocl_3290 NC_016627.1 3850126 3850338 R PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain; hydrid cluster protein-associated redox disulfide domain protein complement(3850126..3850338) Clostridium clariflavum DSM 19732 11563705 YP_005047720.1 CDS Clocl_3291 NC_016627.1 3850518 3851072 R PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily complement(3850518..3851072) Clostridium clariflavum DSM 19732 11563706 YP_005047721.1 CDS Clocl_3292 NC_016627.1 3851095 3851937 R PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; hydro-lyase, Fe-S type, tartrate/fumarate subfamily complement(3851095..3851937) Clostridium clariflavum DSM 19732 11563707 YP_005047722.1 CDS Clocl_3293 NC_016627.1 3852285 3852677 D PFAM: Universal stress protein family; universal stress family protein 3852285..3852677 Clostridium clariflavum DSM 19732 11563708 YP_005047723.1 CDS Clocl_3294 NC_016627.1 3853068 3853346 D PFAM: Bacterial DNA-binding protein; nucleoid DNA-binding protein 3853068..3853346 Clostridium clariflavum DSM 19732 11563709 YP_005047724.1 CDS Clocl_3295 NC_016627.1 3853418 3854227 R PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A; sporulation transcription factor Spo0A complement(3853418..3854227) Clostridium clariflavum DSM 19732 11563710 YP_005047725.1 CDS Clocl_3296 NC_016627.1 3854411 3855679 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase complement(3854411..3855679) Clostridium clariflavum DSM 19732 11563711 YP_005047726.1 CDS Clocl_3297 NC_016627.1 3856163 3857083 D PFAM: Response regulator receiver domain; response regulator containing a CheY-like receiver domain and a GGDEF domain 3856163..3857083 Clostridium clariflavum DSM 19732 11563712 YP_005047727.1 CDS Clocl_3298 NC_016627.1 3857141 3858277 R PFAM: Putative RNA methylase family UPF0020; THUMP domain; putative N6-adenine-specific DNA methylase complement(3857141..3858277) Clostridium clariflavum DSM 19732 11563713 YP_005047728.1 CDS Clocl_3299 NC_016627.1 3858509 3858853 R hypothetical protein complement(3858509..3858853) Clostridium clariflavum DSM 19732 11563714 YP_005047729.1 CDS Clocl_3302 NC_016627.1 3859449 3860291 D PFAM: Transglutaminase-like superfamily; transglutaminase 3859449..3860291 Clostridium clariflavum DSM 19732 11563715 YP_005047730.1 CDS Clocl_3303 NC_016627.1 3860352 3862850 R PFAM: Cohesin domain; S-layer homology domain; manually curated; putative S-layer protein complement(3860352..3862850) Clostridium clariflavum DSM 19732 11563716 YP_005047731.1 CDS Clocl_3304 NC_016627.1 3863480 3867592 R PFAM: Cohesin domain; S-layer homology domain; manually curated; putative S-layer protein complement(3863480..3867592) Clostridium clariflavum DSM 19732 11563717 YP_005047732.1 CDS Clocl_3305 NC_016627.1 3867605 3870988 R PFAM: Cohesin domain; manually curated; Cohesin domain protein complement(3867605..3870988) Clostridium clariflavum DSM 19732 11563718 YP_005047733.1 CDS Clocl_3306 NC_016627.1 3871166 3876289 R PFAM: Cellulose binding domain; Cohesin domain; Cellulose binding domain-containing protein complement(3871166..3876289) Clostridium clariflavum DSM 19732 11563719 YP_005047734.1 CDS Clocl_3307 NC_016627.1 3877236 3877883 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein complement(3877236..3877883) Clostridium clariflavum DSM 19732 11563720 YP_005047735.1 CDS Clocl_3308 NC_016627.1 3878199 3879617 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI/penicillin-binding protein 2 complement(3878199..3879617) Clostridium clariflavum DSM 19732 11563721 YP_005047736.1 CDS Clocl_3309 NC_016627.1 3879604 3880878 R PFAM: Cell cycle protein; cell division membrane protein complement(3879604..3880878) Clostridium clariflavum DSM 19732 11563722 YP_005047737.1 CDS Clocl_3310 NC_016627.1 3881085 3882476 D PFAM: Transposase DDE domain; transposase family protein 3881085..3882476 Clostridium clariflavum DSM 19732 11563723 YP_005047738.1 CDS Clocl_3311 NC_016627.1 3882516 3882968 R PFAM: FHA domain; FHA domain-containing protein complement(3882516..3882968) Clostridium clariflavum DSM 19732 11563724 YP_005047739.1 CDS Clocl_3312 NC_016627.1 3883492 3885024 D PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 3883492..3885024 Clostridium clariflavum DSM 19732 11563725 YP_005047740.1 CDS Clocl_3313 NC_016627.1 3885084 3886637 R PFAM: Rhomboid family; hypothetical protein complement(3885084..3886637) Clostridium clariflavum DSM 19732 11563726 YP_005047741.1 CDS Clocl_3317 NC_016627.1 3893250 3894530 D hypothetical protein 3893250..3894530 Clostridium clariflavum DSM 19732 11563730 YP_005047742.1 CDS Clocl_3318 NC_016627.1 3894781 3895506 D PFAM: ABC transporter; multidrug ABC transporter ATPase 3894781..3895506 Clostridium clariflavum DSM 19732 11563731 YP_005047743.1 CDS Clocl_3319 NC_016627.1 3895493 3896245 D hypothetical protein 3895493..3896245 Clostridium clariflavum DSM 19732 11563732 YP_005047744.1 CDS Clocl_3320 NC_016627.1 3896248 3897732 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase,HAMP domain-containing protein,histidine kinase 3896248..3897732 Clostridium clariflavum DSM 19732 11563733 YP_005047745.1 CDS Clocl_3321 NC_016627.1 3897729 3898424 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 3897729..3898424 Clostridium clariflavum DSM 19732 11563734 YP_005047746.1 CDS Clocl_3322 NC_016627.1 3898527 3900257 R PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase and permease complement(3898527..3900257) Clostridium clariflavum DSM 19732 11563735 YP_005047747.1 CDS Clocl_3323 NC_016627.1 3900385 3900819 R PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein complement(3900385..3900819) Clostridium clariflavum DSM 19732 11563736 YP_005047748.1 CDS Clocl_3324 NC_016627.1 3900992 3902071 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; pilus retraction protein PilT complement(3900992..3902071) Clostridium clariflavum DSM 19732 11563737 YP_005047749.1 CDS Clocl_3325 NC_016627.1 3902652 3903602 D PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase; L-lactate dehydrogenase 3902652..3903602 Clostridium clariflavum DSM 19732 11563738 YP_005047750.1 CDS Clocl_3326 NC_016627.1 3903635 3904807 D PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malic enzyme 3903635..3904807 Clostridium clariflavum DSM 19732 11563739 YP_005047751.1 CDS Clocl_3327 NC_016627.1 3905333 3907864 D PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; Carbohydrate binding module (family 6); lysophospholipase L1-like esterase 3905333..3907864 Clostridium clariflavum DSM 19732 11563740 YP_005047752.1 CDS Clocl_3328 NC_016627.1 3907924 3908670 R PFAM: CAAX amino terminal protease family; CAAX amino terminal protease complement(3907924..3908670) Clostridium clariflavum DSM 19732 11563741 YP_005047753.1 CDS Clocl_3330 NC_016627.1 3908965 3910779 R PFAM: MutS domain V; mismatch repair ATPase (MutS family) complement(3908965..3910779) Clostridium clariflavum DSM 19732 11563743 YP_005047754.1 CDS Clocl_3331 NC_016627.1 3911396 3912568 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase-like oxidoreductase 3911396..3912568 Clostridium clariflavum DSM 19732 11563744 YP_005047755.1 CDS Clocl_3332 NC_016627.1 3912701 3913144 R PFAM: Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: intein N-terminal splicing region; transcription elongation factor complement(3912701..3913144) Clostridium clariflavum DSM 19732 11563745 YP_005047756.1 CDS Clocl_3333 NC_016627.1 3913327 3914145 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(3913327..3914145) Clostridium clariflavum DSM 19732 11563746 YP_005047757.1 CDS Clocl_3334 NC_016627.1 3914326 3915645 R PFAM: Cohesin domain; S-layer homology domain; putative S-layer protein complement(3914326..3915645) Clostridium clariflavum DSM 19732 11563747 YP_005047758.1 CDS Clocl_3335 NC_016627.1 3915974 3917173 R hypothetical protein complement(3915974..3917173) Clostridium clariflavum DSM 19732 11563748 YP_005047759.1 CDS Clocl_3336 NC_016627.1 3917412 3918347 D hypothetical protein 3917412..3918347 Clostridium clariflavum DSM 19732 11563749 YP_005047760.1 CDS Clocl_3337 NC_016627.1 3918577 3920346 R hypothetical protein complement(3918577..3920346) Clostridium clariflavum DSM 19732 11563750 YP_005047761.1 CDS Clocl_3338 NC_016627.1 3920639 3922033 R PFAM: Sporulation and spore germination; sporulation/spore germination protein complement(3920639..3922033) Clostridium clariflavum DSM 19732 11563751 YP_005047762.1 CDS Clocl_3339 NC_016627.1 3922036 3922617 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(3922036..3922617) Clostridium clariflavum DSM 19732 11563752 YP_005047763.1 CDS Clocl_3340 NC_016627.1 3922830 3922997 R hypothetical protein complement(3922830..3922997) Clostridium clariflavum DSM 19732 11563753 YP_005047764.1 CDS Clocl_3341 NC_016627.1 3922960 3924822 R PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase and permease complement(3922960..3924822) Clostridium clariflavum DSM 19732 11563754 YP_005047765.1 CDS Clocl_3342 NC_016627.1 3924819 3927038 R PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase and permease complement(3924819..3927038) Clostridium clariflavum DSM 19732 11563755 YP_005047766.1 CDS Clocl_3343 NC_016627.1 3927066 3927506 R PFAM: MarR family; transcriptional regulator complement(3927066..3927506) Clostridium clariflavum DSM 19732 11563756 YP_005047767.1 CDS Clocl_3344 NC_016627.1 3927683 3929047 R PFAM: Citrate synthase; citrate synthase complement(3927683..3929047) Clostridium clariflavum DSM 19732 11563757 YP_005047768.1 CDS Clocl_3345 NC_016627.1 3929211 3929471 R PFAM: Uncharacterised protein family (UPF0153); putative Fe-S oxidoreductase complement(3929211..3929471) Clostridium clariflavum DSM 19732 11563758 YP_005047769.1 CDS Clocl_3346 NC_016627.1 3929807 3931207 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: amidophosphoribosyltransferase; glutamine phosphoribosylpyrophosphate amidotransferase 3929807..3931207 Clostridium clariflavum DSM 19732 11563759 YP_005047770.1 CDS Clocl_3347 NC_016627.1 3931355 3931561 R hypothetical protein complement(3931355..3931561) Clostridium clariflavum DSM 19732 11563760 YP_005047771.1 CDS Clocl_3348 NC_016627.1 3932075 3933385 R PFAM: Phosphotransferase enzyme family; DNA-binding domain-containing protein complement(3932075..3933385) Clostridium clariflavum DSM 19732 11563761 YP_005047772.1 CDS Clocl_3349 NC_016627.1 3933924 3937148 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(3933924..3937148) Clostridium clariflavum DSM 19732 11563762 YP_005047773.1 CDS Clocl_3350 NC_016627.1 3937494 3938291 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase complement(3937494..3938291) Clostridium clariflavum DSM 19732 11563763 YP_005047774.1 CDS Clocl_3351 NC_016627.1 3938468 3938734 R hypothetical protein complement(3938468..3938734) Clostridium clariflavum DSM 19732 11563764 YP_005047775.1 CDS Clocl_3352 NC_016627.1 3938739 3939254 R PFAM: Protein of unknown function (DUF458); hypothetical protein complement(3938739..3939254) Clostridium clariflavum DSM 19732 11563765 YP_005047776.1 CDS Clocl_3353 NC_016627.1 3939542 3939676 R hypothetical protein complement(3939542..3939676) Clostridium clariflavum DSM 19732 11563766 YP_005047777.1 CDS Clocl_3354 NC_016627.1 3939844 3942087 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(3939844..3942087) Clostridium clariflavum DSM 19732 11563767 YP_005047778.1 CDS Clocl_3355 NC_016627.1 3942413 3942559 D hypothetical protein 3942413..3942559 Clostridium clariflavum DSM 19732 11563768 YP_005047779.1 CDS Clocl_3356 NC_016627.1 3942657 3943397 R PFAM: Dockerin type I repeat; dockerin-like protein complement(3942657..3943397) Clostridium clariflavum DSM 19732 11563769 YP_005047780.1 CDS Clocl_3357 NC_016627.1 3943764 3947210 D PFAM: Iron only hydrogenase large subunit, C-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; Iron hydrogenase small subunit; TIGRFAM: putative selenate reductase, YgfK subunit; hydrogenase, Fe-only; hydrogenase, Fe-only 3943764..3947210 Clostridium clariflavum DSM 19732 11563770 YP_005047781.1 CDS Clocl_3358 NC_016627.1 3947298 3949262 R hypothetical protein complement(3947298..3949262) Clostridium clariflavum DSM 19732 11563771 YP_005047782.1 CDS Clocl_3359 NC_016627.1 3949265 3949759 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(3949265..3949759) Clostridium clariflavum DSM 19732 11563772 YP_005047783.1 CDS Clocl_3360 NC_016627.1 3950179 3951096 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(3950179..3951096) Clostridium clariflavum DSM 19732 11563773 YP_005047784.1 CDS Clocl_3361 NC_016627.1 3951931 3955188 D PFAM: Dockerin type I repeat; Polysaccharide deacetylase; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; putative xylanase/chitin deacetylase 3951931..3955188 Clostridium clariflavum DSM 19732 11563774 YP_005047785.1 CDS Clocl_3362 NC_016627.1 3955438 3957405 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(3955438..3957405) Clostridium clariflavum DSM 19732 11563775 YP_005047786.1 CDS Clocl_3363 NC_016627.1 3957380 3958075 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(3957380..3958075) Clostridium clariflavum DSM 19732 11563776 YP_005047787.1 CDS Clocl_3364 NC_016627.1 3958397 3958990 R PFAM: Rubrerythrin; rubrerythrin complement(3958397..3958990) Clostridium clariflavum DSM 19732 11563777 YP_005047788.1 CDS Clocl_3365 NC_016627.1 3959215 3960030 R PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase complement(3959215..3960030) Clostridium clariflavum DSM 19732 11563778 YP_005047789.1 CDS Clocl_3366 NC_016627.1 3960356 3960979 R PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein; phosphate transport regulator related to PhoU complement(3960356..3960979) Clostridium clariflavum DSM 19732 11563779 YP_005047790.1 CDS Clocl_3367 NC_016627.1 3961064 3962116 R PFAM: Phosphate transporter family; phosphate/sulfate permease complement(3961064..3962116) Clostridium clariflavum DSM 19732 11563780 YP_005047791.1 CDS Clocl_3368 NC_016627.1 3962541 3963149 D PFAM: Predicted membrane protein (DUF2324); manually curated; hypothetical protein 3962541..3963149 Clostridium clariflavum DSM 19732 11563781 YP_005047792.1 CDS Clocl_3369 NC_016627.1 3963146 3963571 D hypothetical protein 3963146..3963571 Clostridium clariflavum DSM 19732 11563782 YP_005047793.1 CDS Clocl_3371 NC_016627.1 3964738 3965610 R hypothetical protein complement(3964738..3965610) Clostridium clariflavum DSM 19732 11563784 YP_005047794.1 CDS Clocl_3372 NC_016627.1 3965672 3966232 R hypothetical protein complement(3965672..3966232) Clostridium clariflavum DSM 19732 11563785 YP_005047795.1 CDS Clocl_3373 NC_016627.1 3966493 3966750 R hypothetical protein complement(3966493..3966750) Clostridium clariflavum DSM 19732 11563786 YP_005047796.1 CDS Clocl_3374 NC_016627.1 3967092 3967949 D hypothetical protein 3967092..3967949 Clostridium clariflavum DSM 19732 11563787 YP_005047797.1 CDS Clocl_3375 NC_016627.1 3967946 3969175 D PFAM: Glutathionylspermidine synthase; glutathionylspermidine synthase 3967946..3969175 Clostridium clariflavum DSM 19732 11563788 YP_005047798.1 CDS Clocl_3376 NC_016627.1 3969165 3969917 D hypothetical protein 3969165..3969917 Clostridium clariflavum DSM 19732 11563789 YP_005047799.1 CDS Clocl_3377 NC_016627.1 3970185 3971075 D hypothetical protein 3970185..3971075 Clostridium clariflavum DSM 19732 11563790 YP_005047800.1 CDS Clocl_3378 NC_016627.1 3971090 3972397 D PFAM: DnaJ domain; DnaJ-class molecular chaperone with C-terminal Zn finger domain 3971090..3972397 Clostridium clariflavum DSM 19732 11563791 YP_005047801.1 CDS Clocl_3379 NC_016627.1 3972751 3973674 R hypothetical protein complement(3972751..3973674) Clostridium clariflavum DSM 19732 11563792 YP_005047802.1 CDS Clocl_3380 NC_016627.1 3973676 3974470 R PFAM: Domain of unknown function (DUF955); putative Zn peptidase complement(3973676..3974470) Clostridium clariflavum DSM 19732 11563793 YP_005047803.1 CDS Clocl_3381 NC_016627.1 3974460 3974858 R hypothetical protein complement(3974460..3974858) Clostridium clariflavum DSM 19732 11563794 YP_005047804.1 CDS Clocl_3382 NC_016627.1 3975148 3978912 R PFAM: UvrD/REP helicase; TIGRFAM: helicase-exonuclease AddAB, AddA subunit, Firmicutes type; recombination helicase AddA complement(3975148..3978912) Clostridium clariflavum DSM 19732 11563795 YP_005047805.1 CDS Clocl_3383 NC_016627.1 3978953 3982426 R PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: helicase-exonuclease AddAB, AddB subunit; DNA helicase/exodeoxyribonuclease V subunit B complement(3978953..3982426) Clostridium clariflavum DSM 19732 11563796 YP_005047806.1 CDS Clocl_3384 NC_016627.1 3982686 3983198 R manually curated; hypothetical protein complement(3982686..3983198) Clostridium clariflavum DSM 19732 11563797 YP_005047807.1 CDS Clocl_3385 NC_016627.1 3983224 3983637 R manually curated; hypothetical protein complement(3983224..3983637) Clostridium clariflavum DSM 19732 11563798 YP_005047808.1 CDS Clocl_3386 NC_016627.1 3984018 3985553 R TIGRFAM: type I secretion membrane fusion protein, HlyD family; manually curated; hypothetical protein complement(3984018..3985553) Clostridium clariflavum DSM 19732 11563799 YP_005047809.1 CDS Clocl_3387 NC_016627.1 3985555 3987780 R PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; bacteriocin ABC transporter complement(3985555..3987780) Clostridium clariflavum DSM 19732 11563800 YP_005047810.1 CDS Clocl_3388 NC_016627.1 3988025 3989416 D PFAM: Transposase DDE domain; transposase family protein 3988025..3989416 Clostridium clariflavum DSM 19732 11563801 YP_005047811.1 CDS Clocl_3389 NC_016627.1 3989578 3990033 R PFAM: Transposase IS200 like; transposase complement(3989578..3990033) Clostridium clariflavum DSM 19732 11563802 YP_005047812.1 CDS Clocl_3390 NC_016627.1 3990247 3991881 R PFAM: AMP-binding enzyme; acyl-CoA synthetase complement(3990247..3991881) Clostridium clariflavum DSM 19732 11563803 YP_005047813.1 CDS Clocl_3391 NC_016627.1 3992224 3993219 R PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase complement(3992224..3993219) Clostridium clariflavum DSM 19732 11563804 YP_005047814.1 CDS Clocl_3392 NC_016627.1 3993532 3993762 D hypothetical protein 3993532..3993762 Clostridium clariflavum DSM 19732 11563805 YP_005047815.1 CDS Clocl_3393 NC_016627.1 3993952 3994674 D PFAM: short chain dehydrogenase; dehydrogenase 3993952..3994674 Clostridium clariflavum DSM 19732 11563806 YP_005047816.1 CDS Clocl_3394 NC_016627.1 3994937 3996955 D PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); 1,4-alpha-glucan-branching protein 3994937..3996955 Clostridium clariflavum DSM 19732 11563807 YP_005047817.1 CDS Clocl_3395 NC_016627.1 3997445 3999388 D PFAM: Cohesin domain; Cohesin domain protein 3997445..3999388 Clostridium clariflavum DSM 19732 11563808 YP_005047818.1 CDS Clocl_3396 NC_016627.1 3999637 4001466 D PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase 3999637..4001466 Clostridium clariflavum DSM 19732 11563809 YP_005047819.1 CDS Clocl_3397 NC_016627.1 4001584 4001691 R hypothetical protein complement(4001584..4001691) Clostridium clariflavum DSM 19732 11563810 YP_005047820.1 CDS Clocl_3398 NC_016627.1 4001831 4004386 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(4001831..4004386) Clostridium clariflavum DSM 19732 11563811 YP_005047821.1 CDS Clocl_3399 NC_016627.1 4004803 4006092 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4004803..4006092 Clostridium clariflavum DSM 19732 11563812 YP_005047822.1 CDS Clocl_3400 NC_016627.1 4006483 4007550 R PFAM: FIST C domain; FIST N domain; FIST domain-containing protein complement(4006483..4007550) Clostridium clariflavum DSM 19732 11563813 YP_005047823.1 CDS Clocl_3401 NC_016627.1 4008135 4008371 D hypothetical protein 4008135..4008371 Clostridium clariflavum DSM 19732 11563814 YP_005047824.1 CDS Clocl_3402 NC_016627.1 4008680 4010863 D PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 4008680..4010863 Clostridium clariflavum DSM 19732 11563815 YP_005047825.1 CDS Clocl_3403 NC_016627.1 4010891 4011253 R PFAM: Protein of unknown function (DUF1667); hypothetical protein complement(4010891..4011253) Clostridium clariflavum DSM 19732 11563816 YP_005047826.1 CDS Clocl_3404 NC_016627.1 4011243 4012484 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(4011243..4012484) Clostridium clariflavum DSM 19732 11563817 YP_005047827.1 CDS Clocl_3405 NC_016627.1 4012498 4013952 R PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase; putative dehydrogenase complement(4012498..4013952) Clostridium clariflavum DSM 19732 11563818 YP_005047828.1 CDS Clocl_3406 NC_016627.1 4014233 4015852 R hypothetical protein complement(4014233..4015852) Clostridium clariflavum DSM 19732 11563819 YP_005047829.1 CDS Clocl_3407 NC_016627.1 4015882 4016676 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(4015882..4016676) Clostridium clariflavum DSM 19732 11563820 YP_005047830.1 CDS Clocl_3408 NC_016627.1 4016727 4017524 R PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase complement(4016727..4017524) Clostridium clariflavum DSM 19732 11563821 YP_005047831.1 CDS Clocl_3409 NC_016627.1 4017521 4018510 R hypothetical protein complement(4017521..4018510) Clostridium clariflavum DSM 19732 11563822 YP_005047832.1 CDS Clocl_3410 NC_016627.1 4018555 4019496 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(4018555..4019496) Clostridium clariflavum DSM 19732 11563823 YP_005047833.1 CDS Clocl_3411 NC_016627.1 4019499 4020614 R PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(4019499..4020614) Clostridium clariflavum DSM 19732 11563824 YP_005047834.1 CDS Clocl_3412 NC_016627.1 4020938 4022560 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(4020938..4022560) Clostridium clariflavum DSM 19732 11563825 YP_005047835.1 CDS Clocl_3413 NC_016627.1 4022692 4023009 R hypothetical protein complement(4022692..4023009) Clostridium clariflavum DSM 19732 11563826 YP_005047836.1 CDS Clocl_3414 NC_016627.1 4023044 4023574 R PFAM: Ferritin-like domain; ferritin-like protein complement(4023044..4023574) Clostridium clariflavum DSM 19732 11563827 YP_005047837.1 CDS Clocl_3415 NC_016627.1 4023762 4024727 R PFAM: Domain of unknown function (DUF227); putative homoserine kinase type II (protein kinase fold) complement(4023762..4024727) Clostridium clariflavum DSM 19732 11563828 YP_005047838.1 CDS Clocl_3416 NC_016627.1 4025299 4025856 R PFAM: Hemerythrin HHE cation binding domain; hypothetical protein complement(4025299..4025856) Clostridium clariflavum DSM 19732 11563829 YP_005047839.1 CDS Clocl_3417 NC_016627.1 4026034 4027830 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase subunit 1, adenylylsulfate kinase complement(4026034..4027830) Clostridium clariflavum DSM 19732 11563830 YP_005047840.1 CDS Clocl_3418 NC_016627.1 4027832 4028713 R PFAM: Phosphoadenosine phosphosulfate reductase family; PAPS reductase/FAD synthetase family protein complement(4027832..4028713) Clostridium clariflavum DSM 19732 11563831 YP_005047841.1 CDS Clocl_3419 NC_016627.1 4028716 4029441 R PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); thioredoxin-dependent phosophoadenylyl-sulfate reductase complement(4028716..4029441) Clostridium clariflavum DSM 19732 11563832 YP_005047842.1 CDS Clocl_3420 NC_016627.1 4029492 4031105 R PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; sulfite reductase subunit beta (hemoprotein) complement(4029492..4031105) Clostridium clariflavum DSM 19732 11563833 YP_005047843.1 CDS Clocl_3421 NC_016627.1 4031521 4032660 R PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine beta-lyase/cystathionine gamma-synthase complement(4031521..4032660) Clostridium clariflavum DSM 19732 11563834 YP_005047844.1 CDS Clocl_3422 NC_016627.1 4032981 4036070 R PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(4032981..4036070) Clostridium clariflavum DSM 19732 11563835 YP_005047845.1 CDS Clocl_3423 NC_016627.1 4036406 4036894 R hypothetical protein complement(4036406..4036894) Clostridium clariflavum DSM 19732 11563836 YP_005047846.1 CDS Clocl_3424 NC_016627.1 4037030 4037683 D hypothetical protein 4037030..4037683 Clostridium clariflavum DSM 19732 11563837 YP_005047847.1 CDS Clocl_3425 NC_016627.1 4037864 4038565 R hypothetical protein complement(4037864..4038565) Clostridium clariflavum DSM 19732 11563838 YP_005047848.1 CDS Clocl_3426 NC_016627.1 4038760 4039644 R PFAM: Radical SAM superfamily; DNA repair photolyase complement(4038760..4039644) Clostridium clariflavum DSM 19732 11563839 YP_005047849.1 CDS Clocl_3427 NC_016627.1 4039756 4041165 R hypothetical protein complement(4039756..4041165) Clostridium clariflavum DSM 19732 11563840 YP_005047850.1 CDS Clocl_3428 NC_016627.1 4041440 4041955 R PFAM: Protein of unknown function (DUF1706); hypothetical protein complement(4041440..4041955) Clostridium clariflavum DSM 19732 11563841 YP_005047851.1 CDS Clocl_3429 NC_016627.1 4042031 4042927 R PFAM: HTH domain; putative transcriptional regulator complement(4042031..4042927) Clostridium clariflavum DSM 19732 11563842 YP_005047852.1 CDS Clocl_3430 NC_016627.1 4043374 4044498 R PFAM: SPFH domain / Band 7 family; membrane protease subunit, stomatin/prohibitin complement(4043374..4044498) Clostridium clariflavum DSM 19732 11563843 YP_005047853.1 CDS Clocl_3432 NC_016627.1 4045480 4045869 D PFAM: Penicillinase repressor; putative transcriptional regulator 4045480..4045869 Clostridium clariflavum DSM 19732 11563845 YP_005047854.1 CDS Clocl_3433 NC_016627.1 4045872 4046969 D PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein 4045872..4046969 Clostridium clariflavum DSM 19732 11563846 YP_005047855.1 CDS Clocl_3434 NC_016627.1 4046997 4047854 D hypothetical protein 4046997..4047854 Clostridium clariflavum DSM 19732 11563847 YP_005047856.1 CDS Clocl_3435 NC_016627.1 4048045 4048992 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(4048045..4048992) Clostridium clariflavum DSM 19732 11563848 YP_005047857.1 CDS Clocl_3436 NC_016627.1 4049554 4050651 R PFAM: HD domain; Protein of unknown function (DUF1113); hypothetical protein complement(4049554..4050651) Clostridium clariflavum DSM 19732 11563849 YP_005047858.1 CDS Clocl_3438 NC_016627.1 4051390 4051914 R hypothetical protein complement(4051390..4051914) Clostridium clariflavum DSM 19732 11563851 YP_005047859.1 CDS Clocl_3439 NC_016627.1 4052225 4052656 R hypothetical protein complement(4052225..4052656) Clostridium clariflavum DSM 19732 11563852 YP_005047860.1 CDS Clocl_3441 NC_016627.1 4057621 4059120 D hypothetical protein 4057621..4059120 Clostridium clariflavum DSM 19732 11563854 YP_005047861.1 CDS Clocl_3442 NC_016627.1 4059801 4060322 R hypothetical protein complement(4059801..4060322) Clostridium clariflavum DSM 19732 11563855 YP_005047862.1 CDS Clocl_3443 NC_016627.1 4060829 4061188 D PFAM: PilZ domain; PilZ domain-containing protein 4060829..4061188 Clostridium clariflavum DSM 19732 11563856 YP_005047863.1 CDS Clocl_3445 NC_016627.1 4061483 4062103 R hypothetical protein complement(4061483..4062103) Clostridium clariflavum DSM 19732 11563858 YP_005047864.1 CDS Clocl_3446 NC_016627.1 4062259 4062606 R hypothetical protein complement(4062259..4062606) Clostridium clariflavum DSM 19732 11563859 YP_005047865.1 CDS Clocl_3447 NC_016627.1 4062782 4065172 R PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E; stage II sporulation protein E complement(4062782..4065172) Clostridium clariflavum DSM 19732 11563860 YP_005047866.1 CDS Clocl_3448 NC_016627.1 4065260 4065475 D hypothetical protein 4065260..4065475 Clostridium clariflavum DSM 19732 11563861 YP_005047867.1 CDS Clocl_3450 NC_016627.1 4066576 4066995 R hypothetical protein complement(4066576..4066995) Clostridium clariflavum DSM 19732 11563863 YP_005047868.1 CDS Clocl_3451 NC_016627.1 4067096 4067884 R PFAM: Nucleotidyltransferase domain; nucleotidyltransferase family protein complement(4067096..4067884) Clostridium clariflavum DSM 19732 11563864 YP_005047869.1 CDS Clocl_3452 NC_016627.1 4067984 4070584 R hypothetical protein complement(4067984..4070584) Clostridium clariflavum DSM 19732 11563865 YP_005047870.1 CDS Clocl_3453 NC_016627.1 4070581 4071351 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(4070581..4071351) Clostridium clariflavum DSM 19732 11563866 YP_005047871.1 CDS Clocl_3455 NC_016627.1 4073544 4076156 R hypothetical protein complement(4073544..4076156) Clostridium clariflavum DSM 19732 11563868 YP_005047872.1 CDS Clocl_3456 NC_016627.1 4076153 4076923 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(4076153..4076923) Clostridium clariflavum DSM 19732 11563869 YP_005047873.1 CDS Clocl_3458 NC_016627.1 4078840 4079031 R hypothetical protein complement(4078840..4079031) Clostridium clariflavum DSM 19732 11563871 YP_005047874.1 CDS Clocl_3461 NC_016627.1 4081415 4081651 D hypothetical protein 4081415..4081651 Clostridium clariflavum DSM 19732 11563874 YP_005047875.1 CDS Clocl_3462 NC_016627.1 4081927 4084527 R hypothetical protein complement(4081927..4084527) Clostridium clariflavum DSM 19732 11563875 YP_005047876.1 CDS Clocl_3463 NC_016627.1 4084524 4085294 R PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein complement(4084524..4085294) Clostridium clariflavum DSM 19732 11563876 YP_005047877.1 CDS Clocl_3466 NC_016627.1 4087388 4088146 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(4087388..4088146) Clostridium clariflavum DSM 19732 11563879 YP_005047878.1 CDS Clocl_3467 NC_016627.1 4088146 4089633 R PFAM: Integrase core domain; transposase complement(4088146..4089633) Clostridium clariflavum DSM 19732 11563880 YP_005047879.1 CDS Clocl_3468 NC_016627.1 4089978 4090427 R hypothetical protein complement(4089978..4090427) Clostridium clariflavum DSM 19732 11563881 YP_005047880.1 CDS Clocl_3469 NC_016627.1 4090440 4092053 R hypothetical protein complement(4090440..4092053) Clostridium clariflavum DSM 19732 11563882 YP_005047881.1 CDS Clocl_3472 NC_016627.1 4093127 4093717 R PFAM: Pentapeptide repeats (8 copies); putative low-complexity protein complement(4093127..4093717) Clostridium clariflavum DSM 19732 11563885 YP_005047882.1 CDS Clocl_3473 NC_016627.1 4093739 4094812 R hypothetical protein complement(4093739..4094812) Clostridium clariflavum DSM 19732 11563886 YP_005047883.1 CDS Clocl_3474 NC_016627.1 4095033 4095494 R hypothetical protein complement(4095033..4095494) Clostridium clariflavum DSM 19732 11563887 YP_005047884.1 CDS Clocl_3475 NC_016627.1 4095527 4098076 R hypothetical protein complement(4095527..4098076) Clostridium clariflavum DSM 19732 11563888 YP_005047885.1 CDS Clocl_3476 NC_016627.1 4098049 4099575 R PFAM: Transglutaminase-like superfamily; transglutaminase complement(4098049..4099575) Clostridium clariflavum DSM 19732 11563889 YP_005047886.1 CDS Clocl_3480 NC_016627.1 4105994 4106170 R hypothetical protein complement(4105994..4106170) Clostridium clariflavum DSM 19732 11563893 YP_005047887.1 CDS Clocl_3481 NC_016627.1 4106222 4107196 R hypothetical protein complement(4106222..4107196) Clostridium clariflavum DSM 19732 11563894 YP_005047888.1 CDS Clocl_3482 NC_016627.1 4107889 4108071 R hypothetical protein complement(4107889..4108071) Clostridium clariflavum DSM 19732 11563895 YP_005047889.1 CDS Clocl_3483 NC_016627.1 4108421 4109728 R hypothetical protein complement(4108421..4109728) Clostridium clariflavum DSM 19732 11563896 YP_005047890.1 CDS Clocl_3484 NC_016627.1 4109872 4111206 R PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); Mg2+ transporter MgtE complement(4109872..4111206) Clostridium clariflavum DSM 19732 11563897 YP_005047891.1 CDS Clocl_3485 NC_016627.1 4111221 4111319 R hypothetical protein complement(4111221..4111319) Clostridium clariflavum DSM 19732 11563898 YP_005047892.1 CDS Clocl_3486 NC_016627.1 4111908 4112894 R hypothetical protein complement(4111908..4112894) Clostridium clariflavum DSM 19732 11563899 YP_005047893.1 CDS Clocl_3487 NC_016627.1 4112903 4114975 R PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(4112903..4114975) Clostridium clariflavum DSM 19732 11563900 YP_005047894.1 CDS Clocl_3488 NC_016627.1 4115396 4116151 R PFAM: alpha/beta hydrolase fold; lysophospholipase complement(4115396..4116151) Clostridium clariflavum DSM 19732 11563901 YP_005047895.1 CDS Clocl_3489 NC_016627.1 4116266 4117144 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein complement(4116266..4117144) Clostridium clariflavum DSM 19732 11563902 YP_005047896.1 CDS Clocl_3490 NC_016627.1 4117210 4117959 R PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis complement(4117210..4117959) Clostridium clariflavum DSM 19732 11563903 YP_005047897.1 CDS Clocl_3491 NC_016627.1 4117976 4118713 R manually curated; hypothetical protein complement(4117976..4118713) Clostridium clariflavum DSM 19732 11563904 YP_005047898.1 CDS Clocl_3492 NC_016627.1 4119209 4119772 D PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 4119209..4119772 Clostridium clariflavum DSM 19732 11563905 YP_005047899.1 CDS Clocl_3493 NC_016627.1 4119955 4120557 D hypothetical protein 4119955..4120557 Clostridium clariflavum DSM 19732 11563906 YP_005047900.1 CDS Clocl_3494 NC_016627.1 4120560 4122665 D PFAM: MMPL family; putative RND superfamily exporter 4120560..4122665 Clostridium clariflavum DSM 19732 11563907 YP_005047901.1 CDS Clocl_3495 NC_016627.1 4122655 4124949 D TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; X-X-X-Leu-X-X-Gly heptad repeat-containing protein 4122655..4124949 Clostridium clariflavum DSM 19732 11563908 YP_005047902.1 CDS Clocl_3496 NC_016627.1 4125114 4125650 R PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; dCTP deaminase complement(4125114..4125650) Clostridium clariflavum DSM 19732 11563909 YP_005047903.1 CDS Clocl_3497 NC_016627.1 4125891 4126268 R hypothetical protein complement(4125891..4126268) Clostridium clariflavum DSM 19732 11563910 YP_005047904.1 CDS Clocl_3498 NC_016627.1 4126411 4127079 R hypothetical protein complement(4126411..4127079) Clostridium clariflavum DSM 19732 11563911 YP_005047905.1 CDS Clocl_3499 NC_016627.1 4127182 4127673 R PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5''-phosphate oxidase complement(4127182..4127673) Clostridium clariflavum DSM 19732 11563912 YP_005047906.1 CDS Clocl_3501 NC_016627.1 4129163 4129993 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase complement(4129163..4129993) Clostridium clariflavum DSM 19732 11563914 YP_005047907.1 CDS Clocl_3502 NC_016627.1 4131079 4131870 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(4131079..4131870) Clostridium clariflavum DSM 19732 11563915 YP_005047908.1 CDS Clocl_3503 NC_016627.1 4131919 4133046 R PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family; MGT family glycosyltransferase complement(4131919..4133046) Clostridium clariflavum DSM 19732 11563916 YP_005047909.1 CDS Clocl_3504 NC_016627.1 4133272 4133616 R hypothetical protein complement(4133272..4133616) Clostridium clariflavum DSM 19732 11563917 YP_005047910.1 CDS Clocl_3505 NC_016627.1 4133974 4135524 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(4133974..4135524) Clostridium clariflavum DSM 19732 11563918 YP_005047911.1 CDS Clocl_3508 NC_016627.1 4136244 4136900 R PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(4136244..4136900) Clostridium clariflavum DSM 19732 11563921 YP_005047912.1 CDS Clocl_3509 NC_016627.1 4137086 4139044 R PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein complement(4137086..4139044) Clostridium clariflavum DSM 19732 11563922 YP_005047913.1 CDS Clocl_3510 NC_016627.1 4140161 4141231 R PFAM: Integrase core domain; transposase, IS30 family complement(4140161..4141231) Clostridium clariflavum DSM 19732 11563923 YP_005047914.1 CDS Clocl_3511 NC_016627.1 4141430 4142806 D PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4141430..4142806 Clostridium clariflavum DSM 19732 11563924 YP_005047915.1 CDS Clocl_3512 NC_016627.1 4142847 4145213 R PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein complement(4142847..4145213) Clostridium clariflavum DSM 19732 11563925 YP_005047916.1 CDS Clocl_3513 NC_016627.1 4145634 4146923 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4145634..4146923 Clostridium clariflavum DSM 19732 11563926 YP_005047917.1 CDS Clocl_3514 NC_016627.1 4147420 4148478 R hypothetical protein complement(4147420..4148478) Clostridium clariflavum DSM 19732 11563927 YP_005047918.1 CDS Clocl_3515 NC_016627.1 4148570 4149100 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase complement(4148570..4149100) Clostridium clariflavum DSM 19732 11563928 YP_005047919.1 CDS Clocl_3516 NC_016627.1 4149505 4151055 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(4149505..4151055) Clostridium clariflavum DSM 19732 11563929 YP_005047920.1 CDS Clocl_3517 NC_016627.1 4151288 4151476 D hypothetical protein 4151288..4151476 Clostridium clariflavum DSM 19732 11563930 YP_005047921.1 CDS Clocl_3518 NC_016627.1 4151692 4153215 R hypothetical protein complement(4151692..4153215) Clostridium clariflavum DSM 19732 11563931 YP_005047922.1 CDS Clocl_3519 NC_016627.1 4153267 4153680 R PFAM: EamA-like transporter family; hypothetical protein complement(4153267..4153680) Clostridium clariflavum DSM 19732 11563932 YP_005047923.1 CDS Clocl_3520 NC_016627.1 4153885 4154874 R hypothetical protein complement(4153885..4154874) Clostridium clariflavum DSM 19732 11563933 YP_005047924.1 CDS Clocl_3521 NC_016627.1 4155299 4156105 D PFAM: Glycosyl transferase family 8; LPS:glycosyltransferase 4155299..4156105 Clostridium clariflavum DSM 19732 11563934 YP_005047925.1 CDS Clocl_3522 NC_016627.1 4156241 4156909 R PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain; PP-loop superfamily ATP-utilizing enzyme complement(4156241..4156909) Clostridium clariflavum DSM 19732 11563935 YP_005047926.1 CDS Clocl_3523 NC_016627.1 4156984 4157778 R PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(4156984..4157778) Clostridium clariflavum DSM 19732 11563936 YP_005047927.1 CDS Clocl_3524 NC_016627.1 4157875 4158579 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein complement(4157875..4158579) Clostridium clariflavum DSM 19732 11563937 YP_005047928.1 CDS Clocl_3525 NC_016627.1 4158554 4159270 R PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase complement(4158554..4159270) Clostridium clariflavum DSM 19732 11563938 YP_005047929.1 CDS Clocl_3526 NC_016627.1 4159406 4160242 R PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase, sugar kinase family complement(4159406..4160242) Clostridium clariflavum DSM 19732 11563939 YP_005047930.1 CDS Clocl_3527 NC_016627.1 4160681 4161298 R manually curated; hypothetical protein complement(4160681..4161298) Clostridium clariflavum DSM 19732 11563940 YP_005047931.1 CDS Clocl_3528 NC_016627.1 4161554 4162399 R PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; spermidine synthase complement(4161554..4162399) Clostridium clariflavum DSM 19732 11563941 YP_005047932.1 CDS Clocl_3530 NC_016627.1 4164884 4165417 R PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; 2'-5' RNA ligase complement(4164884..4165417) Clostridium clariflavum DSM 19732 11563943 YP_005047933.1 CDS Clocl_3531 NC_016627.1 4165487 4166551 R hypothetical protein complement(4165487..4166551) Clostridium clariflavum DSM 19732 11563944 YP_005047934.1 CDS Clocl_3533 NC_016627.1 4167484 4167876 D PFAM: Penicillinase repressor; putative transcriptional regulator 4167484..4167876 Clostridium clariflavum DSM 19732 11563946 YP_005047935.1 CDS Clocl_3534 NC_016627.1 4167873 4169480 D PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein 4167873..4169480 Clostridium clariflavum DSM 19732 11563947 YP_005047936.1 CDS Clocl_3535 NC_016627.1 4169504 4172044 R PFAM: Predicted permease; lipoprotein release ABC transporter permease complement(4169504..4172044) Clostridium clariflavum DSM 19732 11563948 YP_005047937.1 CDS Clocl_3536 NC_016627.1 4172041 4172718 R PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase complement(4172041..4172718) Clostridium clariflavum DSM 19732 11563949 YP_005047938.1 CDS Clocl_3537 NC_016627.1 4172828 4173745 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(4172828..4173745) Clostridium clariflavum DSM 19732 11563950 YP_005047939.1 CDS Clocl_3538 NC_016627.1 4173747 4174457 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(4173747..4174457) Clostridium clariflavum DSM 19732 11563951 YP_005047940.1 CDS Clocl_3539 NC_016627.1 4174788 4175285 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase complement(4174788..4175285) Clostridium clariflavum DSM 19732 11563952 YP_005047941.1 CDS Clocl_3541 NC_016627.1 4176767 4177741 R PFAM: Radical SAM superfamily; radical SAM superfamily enzyme complement(4176767..4177741) Clostridium clariflavum DSM 19732 11563954 YP_005047942.1 CDS Clocl_3542 NC_016627.1 4177744 4179525 R PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin complement(4177744..4179525) Clostridium clariflavum DSM 19732 11563955 YP_005047943.1 CDS Clocl_3543 NC_016627.1 4179601 4179747 R hypothetical protein complement(4179601..4179747) Clostridium clariflavum DSM 19732 11563956 YP_005047944.1 CDS Clocl_3544 NC_016627.1 4180289 4180711 R PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; DNA-directed RNA polymerase specialized sigma subunit complement(4180289..4180711) Clostridium clariflavum DSM 19732 11563957 YP_005047945.1 CDS Clocl_3545 NC_016627.1 4181271 4181597 D PFAM: Helix-turn-helix; Helix-turn-helix protein 4181271..4181597 Clostridium clariflavum DSM 19732 11563958 YP_005047946.1 CDS Clocl_3547 NC_016627.1 4181984 4182118 R hypothetical protein complement(4181984..4182118) Clostridium clariflavum DSM 19732 11563959 YP_005047947.1 CDS Clocl_3548 NC_016627.1 4182120 4182752 R PFAM: Accessory gene regulator B; protein possibly involved in post-translational modification of quorum-sensing peptides complement(4182120..4182752) Clostridium clariflavum DSM 19732 11563960 YP_005047948.1 CDS Clocl_3549 NC_016627.1 4183335 4184141 D PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 4183335..4184141 Clostridium clariflavum DSM 19732 11563961 YP_005047949.1 CDS Clocl_3550 NC_016627.1 4184293 4185564 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4184293..4185564 Clostridium clariflavum DSM 19732 11563962 YP_005047950.1 CDS Clocl_3552 NC_016627.1 4186984 4187565 D PFAM: Chromate transporter; chromate transport protein ChrA 4186984..4187565 Clostridium clariflavum DSM 19732 11563964 YP_005047951.1 CDS Clocl_3553 NC_016627.1 4187562 4188125 D PFAM: Chromate transporter; chromate transport protein ChrA 4187562..4188125 Clostridium clariflavum DSM 19732 11563965 YP_005047952.1 CDS Clocl_3554 NC_016627.1 4188285 4188671 D hypothetical protein 4188285..4188671 Clostridium clariflavum DSM 19732 11563966 YP_005047953.1 CDS Clocl_3555 NC_016627.1 4189123 4189857 R PFAM: ABC-2 type transporter; hypothetical protein complement(4189123..4189857) Clostridium clariflavum DSM 19732 11563967 YP_005047954.1 CDS Clocl_3556 NC_016627.1 4189859 4190824 R PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; daunorubicin resistance ABC transporter ATP-binding subunit complement(4189859..4190824) Clostridium clariflavum DSM 19732 11563968 YP_005047955.1 CDS Clocl_3557 NC_016627.1 4190910 4191734 R PFAM: Putative redox-active protein (C_GCAxxG_C_C); Dinitrogenase iron-molybdenum cofactor; TIGRFAM: C_GCAxxG_C_C family probable redox protein; hypothetical protein complement(4190910..4191734) Clostridium clariflavum DSM 19732 11563969 YP_005047956.1 CDS Clocl_3558 NC_016627.1 4191731 4192579 R PFAM: ParA/MinD ATPase like; chromosome partitioning ATPase complement(4191731..4192579) Clostridium clariflavum DSM 19732 11563970 YP_005047957.1 CDS Clocl_3559 NC_016627.1 4192598 4193422 R PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase, beta-lactamase superfamily II complement(4192598..4193422) Clostridium clariflavum DSM 19732 11563971 YP_005047958.1 CDS Clocl_3560 NC_016627.1 4193419 4194303 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily complement(4193419..4194303) Clostridium clariflavum DSM 19732 11563972 YP_005047959.1 CDS Clocl_3561 NC_016627.1 4194281 4195141 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily complement(4194281..4195141) Clostridium clariflavum DSM 19732 11563973 YP_005047960.1 CDS Clocl_3562 NC_016627.1 4195143 4195511 R PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein complement(4195143..4195511) Clostridium clariflavum DSM 19732 11563974 YP_005047961.1 CDS Clocl_3563 NC_016627.1 4195486 4196655 R hypothetical protein complement(4195486..4196655) Clostridium clariflavum DSM 19732 11563975 YP_005047962.1 CDS Clocl_3564 NC_016627.1 4196657 4197202 R PFAM: Protein of unknown function (DUF1393); manually curated; hypothetical protein complement(4196657..4197202) Clostridium clariflavum DSM 19732 11563976 YP_005047963.1 CDS Clocl_3565 NC_016627.1 4197190 4197567 R PFAM: NifU-like N terminal domain; iron-sulfur cluster biosynthesis protein, NifU-like protein complement(4197190..4197567) Clostridium clariflavum DSM 19732 11563977 YP_005047964.1 CDS Clocl_3566 NC_016627.1 4197570 4197944 R PFAM: Protein of unknown function DUF134; putative DNA-binding protein complement(4197570..4197944) Clostridium clariflavum DSM 19732 11563978 YP_005047965.1 CDS Clocl_3567 NC_016627.1 4198010 4198288 R hypothetical protein complement(4198010..4198288) Clostridium clariflavum DSM 19732 11563979 YP_005047966.1 CDS Clocl_3568 NC_016627.1 4198706 4200064 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase complement(4198706..4200064) Clostridium clariflavum DSM 19732 11563980 YP_005047967.1 CDS Clocl_3569 NC_016627.1 4200077 4200817 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family complement(4200077..4200817) Clostridium clariflavum DSM 19732 11563981 YP_005047968.1 CDS Clocl_3572 NC_016627.1 4201439 4201627 R PFAM: Predicted RNA-binding protein; putative RNA-binding protein complement(4201439..4201627) Clostridium clariflavum DSM 19732 11563983 YP_005047969.1 CDS Clocl_3573 NC_016627.1 4201629 4202048 R hypothetical protein complement(4201629..4202048) Clostridium clariflavum DSM 19732 11563984 YP_005047970.1 CDS Clocl_3574 NC_016627.1 4202111 4202980 R PFAM: Amidohydrolase; putative TIM-barrel fold metal-dependent hydrolase complement(4202111..4202980) Clostridium clariflavum DSM 19732 11563985 YP_005047971.1 CDS Clocl_3576 NC_016627.1 4203775 4204779 R PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease complement(4203775..4204779) Clostridium clariflavum DSM 19732 11563987 YP_005047972.1 CDS Clocl_3577 NC_016627.1 4204817 4205833 R PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein complement(4204817..4205833) Clostridium clariflavum DSM 19732 11563988 YP_005047973.1 CDS Clocl_3578 NC_016627.1 4206099 4206728 R PFAM: Precorrin-8X methylmutase; precorrin isomerase complement(4206099..4206728) Clostridium clariflavum DSM 19732 11563989 YP_005047974.1 CDS Clocl_3579 NC_016627.1 4206728 4207252 R PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; ATP:corrinoid adenosyltransferase complement(4206728..4207252) Clostridium clariflavum DSM 19732 11563990 YP_005047975.1 CDS Clocl_3580 NC_016627.1 4207249 4208751 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ; adenosylcobyric acid synthase complement(4207249..4208751) Clostridium clariflavum DSM 19732 11563991 YP_005047976.1 CDS Clocl_3581 NC_016627.1 4208744 4209808 R PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase; L-threonine-O-3-phosphate decarboxylase complement(4208744..4209808) Clostridium clariflavum DSM 19732 11563992 YP_005047977.1 CDS Clocl_3582 NC_016627.1 4209796 4210749 R PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD complement(4209796..4210749) Clostridium clariflavum DSM 19732 11563993 YP_005047978.1 CDS Clocl_3583 NC_016627.1 4210746 4212089 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing), cobyrinate a,c-diamide synthase complement(4210746..4212089) Clostridium clariflavum DSM 19732 11563994 YP_005047979.1 CDS Clocl_3584 NC_016627.1 4212079 4213278 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Putative methyltransferase; TIGRFAM: methyltransferase, FkbM family; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit complement(4212079..4213278) Clostridium clariflavum DSM 19732 11563995 YP_005047980.1 CDS Clocl_3585 NC_016627.1 4213275 4213637 R PFAM: CbiX; hypothetical protein complement(4213275..4213637) Clostridium clariflavum DSM 19732 11563996 YP_005047981.1 CDS Clocl_3586 NC_016627.1 4213634 4214932 R PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase complement(4213634..4214932) Clostridium clariflavum DSM 19732 11563997 YP_005047982.1 CDS Clocl_3587 NC_016627.1 4214929 4215909 R PFAM: Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(4214929..4215909) Clostridium clariflavum DSM 19732 11563998 YP_005047983.1 CDS Clocl_3588 NC_016627.1 4215875 4217404 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(4215875..4217404) Clostridium clariflavum DSM 19732 11563999 YP_005047984.1 CDS Clocl_3589 NC_016627.1 4217409 4218281 R PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; hydroxymethylbilane synthase complement(4217409..4218281) Clostridium clariflavum DSM 19732 11564000 YP_005047985.1 CDS Clocl_3590 NC_016627.1 4218278 4219507 R PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; siroheme synthase, N-terminal domain; precorrin-6x reductase complement(4218278..4219507) Clostridium clariflavum DSM 19732 11564001 YP_005047986.1 CDS Clocl_3591 NC_016627.1 4219537 4220262 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase complement(4219537..4220262) Clostridium clariflavum DSM 19732 11564002 YP_005047987.1 CDS Clocl_3592 NC_016627.1 4220289 4221293 R PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(4220289..4221293) Clostridium clariflavum DSM 19732 11564003 YP_005047988.1 CDS Clocl_3593 NC_016627.1 4221290 4222327 R PFAM: Cobalamin synthesis G C-terminus; Cobalamin biosynthesis central region; Cobalamin synthesis G N-terminal; cobalamin biosynthesis protein CbiG complement(4221290..4222327) Clostridium clariflavum DSM 19732 11564004 YP_005047989.1 CDS Clocl_3594 NC_016627.1 4222324 4223082 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase; cobalt-precorrin 4 C11-methyltransferase complement(4222324..4223082) Clostridium clariflavum DSM 19732 11564005 YP_005047990.1 CDS Clocl_3595 NC_016627.1 4223085 4223765 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase complement(4223085..4223765) Clostridium clariflavum DSM 19732 11564006 YP_005047991.1 CDS Clocl_3596 NC_016627.1 4223762 4224895 R PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; cobalt-precorrin 5B C1-methyltransferase complement(4223762..4224895) Clostridium clariflavum DSM 19732 11564007 YP_005047992.1 CDS Clocl_3597 NC_016627.1 4225047 4225901 R PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit; cobalt transport protein ATP-binding subunit complement(4225047..4225901) Clostridium clariflavum DSM 19732 11564008 YP_005047993.1 CDS Clocl_3598 NC_016627.1 4225914 4226690 R PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; cobalt ABC transporter permease CbiQ complement(4225914..4226690) Clostridium clariflavum DSM 19732 11564009 YP_005047994.1 CDS Clocl_3599 NC_016627.1 4226687 4227013 R PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein; cobalt transport protein complement(4226687..4227013) Clostridium clariflavum DSM 19732 11564010 YP_005047995.1 CDS Clocl_3600 NC_016627.1 4227016 4227756 R PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; cobalamin biosynthesis protein CbiM complement(4227016..4227756) Clostridium clariflavum DSM 19732 11564011 YP_005047996.1 CDS Clocl_3601 NC_016627.1 4228230 4228589 R PFAM: HNH endonuclease; restriction endonuclease complement(4228230..4228589) Clostridium clariflavum DSM 19732 11564012 YP_005047997.1 CDS Clocl_3602 NC_016627.1 4228723 4228953 R hypothetical protein complement(4228723..4228953) Clostridium clariflavum DSM 19732 11564013 YP_005047998.1 CDS Clocl_3603 NC_016627.1 4229096 4230094 R TIGRFAM: putative zinc finger/helix-turn-helix protein, YgiT family; putative zinc finger/helix-turn-helix protein, YgiT family complement(4229096..4230094) Clostridium clariflavum DSM 19732 11564014 YP_005047999.1 CDS Clocl_3604 NC_016627.1 4230134 4230544 R hypothetical protein complement(4230134..4230544) Clostridium clariflavum DSM 19732 11564015 YP_005048000.1 CDS Clocl_3605 NC_016627.1 4230783 4231238 R hypothetical protein complement(4230783..4231238) Clostridium clariflavum DSM 19732 11564016 YP_005048001.1 CDS Clocl_3606 NC_016627.1 4231346 4231633 R PFAM: VRR-NUC domain; VRR-NUC domain-containing protein complement(4231346..4231633) Clostridium clariflavum DSM 19732 11564017 YP_005048002.1 CDS Clocl_3607 NC_016627.1 4231933 4234488 R PFAM: Bifunctional DNA primase/polymerase, N-terminal; bifunctional DNA primase/polymerase famiily protein complement(4231933..4234488) Clostridium clariflavum DSM 19732 11564018 YP_005048003.1 CDS Clocl_3608 NC_016627.1 4235164 4235886 D hypothetical protein 4235164..4235886 Clostridium clariflavum DSM 19732 11564019 YP_005048004.1 CDS Clocl_3609 NC_016627.1 4236032 4236469 R hypothetical protein complement(4236032..4236469) Clostridium clariflavum DSM 19732 11564020 YP_005048005.1 CDS Clocl_3610 NC_016627.1 4236527 4237006 R hypothetical protein complement(4236527..4237006) Clostridium clariflavum DSM 19732 11564021 YP_005048006.1 CDS Clocl_3611 NC_016627.1 4237394 4237696 R hypothetical protein complement(4237394..4237696) Clostridium clariflavum DSM 19732 11564022 YP_005048007.1 CDS Clocl_3612 NC_016627.1 4237927 4238622 R hypothetical protein complement(4237927..4238622) Clostridium clariflavum DSM 19732 11564023 YP_005048008.1 CDS Clocl_3613 NC_016627.1 4238612 4239154 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(4238612..4239154) Clostridium clariflavum DSM 19732 11564024 YP_005048009.1 CDS Clocl_3615 NC_016627.1 4239655 4240953 R PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase complement(4239655..4240953) Clostridium clariflavum DSM 19732 11564026 YP_005048010.1 CDS Clocl_3616 NC_016627.1 4241674 4242318 R PFAM: Plasmid pRiA4b ORF-3-like protein; Plasmid pRiA4b ORF-3-like protein complement(4241674..4242318) Clostridium clariflavum DSM 19732 11564027 YP_005048011.1 CDS Clocl_3617 NC_016627.1 4242324 4242896 R hypothetical protein complement(4242324..4242896) Clostridium clariflavum DSM 19732 11564028 YP_005048012.1 CDS Clocl_3619 NC_016627.1 4243402 4244088 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(4243402..4244088) Clostridium clariflavum DSM 19732 11564030 YP_005048013.1 CDS Clocl_3620 NC_016627.1 4244081 4245553 R PFAM: Integrase core domain; transposase complement(4244081..4245553) Clostridium clariflavum DSM 19732 11564031 YP_005048014.1 CDS Clocl_3621 NC_016627.1 4245717 4246808 R hypothetical protein complement(4245717..4246808) Clostridium clariflavum DSM 19732 11564032 YP_005048015.1 CDS Clocl_3622 NC_016627.1 4246871 4250068 R PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; HsdR family type I site-specific deoxyribonuclease complement(4246871..4250068) Clostridium clariflavum DSM 19732 11564033 YP_005048016.1 CDS Clocl_3623 NC_016627.1 4250098 4251333 R PFAM: Type I restriction modification DNA specificity domain; restriction endonuclease S subunit complement(4250098..4251333) Clostridium clariflavum DSM 19732 11564034 YP_005048017.1 CDS Clocl_3624 NC_016627.1 4251330 4252358 R virulence protein complement(4251330..4252358) Clostridium clariflavum DSM 19732 11564035 YP_005048018.1 CDS Clocl_3625 NC_016627.1 4252348 4253850 R PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction-modification system methyltransferase subunit complement(4252348..4253850) Clostridium clariflavum DSM 19732 11564036 YP_005048019.1 CDS Clocl_3626 NC_016627.1 4253870 4254370 R hypothetical protein complement(4253870..4254370) Clostridium clariflavum DSM 19732 11564037 YP_005048020.1 CDS Clocl_3627 NC_016627.1 4254384 4255967 R PFAM: N-6 DNA Methylase; Type I restriction modification DNA specificity domain; restriction endonuclease S subunit complement(4254384..4255967) Clostridium clariflavum DSM 19732 11564038 YP_005048021.1 CDS Clocl_3628 NC_016627.1 4256315 4256440 R hypothetical protein complement(4256315..4256440) Clostridium clariflavum DSM 19732 11564039 YP_005048022.1 CDS Clocl_3630 NC_016627.1 4257566 4258627 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(4257566..4258627) Clostridium clariflavum DSM 19732 11564041 YP_005048023.1 CDS Clocl_3631 NC_016627.1 4258674 4259372 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(4258674..4259372) Clostridium clariflavum DSM 19732 11564042 YP_005048024.1 CDS Clocl_3632 NC_016627.1 4259391 4259633 R hypothetical protein complement(4259391..4259633) Clostridium clariflavum DSM 19732 11564043 YP_005048025.1 CDS Clocl_3634 NC_016627.1 4259938 4260486 R PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase complement(4259938..4260486) Clostridium clariflavum DSM 19732 11564045 YP_005048026.1 CDS Clocl_3635 NC_016627.1 4260504 4261121 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(4260504..4261121) Clostridium clariflavum DSM 19732 11564046 YP_005048027.1 CDS Clocl_3637 NC_016627.1 4262339 4263025 R PFAM: IstB-like ATP binding protein; DNA replication protein complement(4262339..4263025) Clostridium clariflavum DSM 19732 11564048 YP_005048028.1 CDS Clocl_3638 NC_016627.1 4263018 4264490 R PFAM: Integrase core domain; transposase complement(4263018..4264490) Clostridium clariflavum DSM 19732 11564049 YP_005048029.1 CDS Clocl_3639 NC_016627.1 4264782 4268030 R PFAM: Type III restriction enzyme, res subunit; hypothetical protein complement(4264782..4268030) Clostridium clariflavum DSM 19732 11564050 YP_005048030.1 CDS Clocl_3640 NC_016627.1 4268030 4270933 R PFAM: DNA methylase; adenine specific DNA methylase Mod complement(4268030..4270933) Clostridium clariflavum DSM 19732 11564051 YP_005048031.1 CDS Clocl_3641 NC_016627.1 4270949 4273792 R PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; DNA/RNA helicase complement(4270949..4273792) Clostridium clariflavum DSM 19732 11564052 YP_005048032.1 CDS Clocl_3642 NC_016627.1 4273820 4274029 R PFAM: Helix-turn-helix; putative transcriptional regulator complement(4273820..4274029) Clostridium clariflavum DSM 19732 11564053 YP_005048033.1 CDS Clocl_3646 NC_016627.1 4277839 4278582 R PFAM: Integrase core domain; transposase complement(4277839..4278582) Clostridium clariflavum DSM 19732 11564057 YP_005048034.1 CDS Clocl_3647 NC_016627.1 4278741 4279049 R PFAM: Transposase; transposase complement(4278741..4279049) Clostridium clariflavum DSM 19732 11564058 YP_005048035.1 CDS Clocl_3649 NC_016627.1 4279507 4280805 R PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; Retron-type reverse transcriptase complement(4279507..4280805) Clostridium clariflavum DSM 19732 11564060 YP_005048036.1 CDS Clocl_3651 NC_016627.1 4281408 4282706 R PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase complement(4281408..4282706) Clostridium clariflavum DSM 19732 11564062 YP_005048037.1 CDS Clocl_3652 NC_016627.1 4283405 4284328 R hypothetical protein complement(4283405..4284328) Clostridium clariflavum DSM 19732 11564063 YP_005048038.1 CDS Clocl_3653 NC_016627.1 4284325 4284810 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(4284325..4284810) Clostridium clariflavum DSM 19732 11564064 YP_005048039.1 CDS Clocl_3654 NC_016627.1 4285191 4287812 R PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein complement(4285191..4287812) Clostridium clariflavum DSM 19732 11564065 YP_005048040.1 CDS Clocl_3655 NC_016627.1 4287815 4288177 R PFAM: Penicillinase repressor; putative transcriptional regulator complement(4287815..4288177) Clostridium clariflavum DSM 19732 11564066 YP_005048041.1 CDS Clocl_3656 NC_016627.1 4288360 4289928 R PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin complement(4288360..4289928) Clostridium clariflavum DSM 19732 11564067 YP_005048042.1 CDS Clocl_3657 NC_016627.1 4289891 4290382 R hypothetical protein complement(4289891..4290382) Clostridium clariflavum DSM 19732 11564068 YP_005048043.1 CDS Clocl_3658 NC_016627.1 4290346 4291914 R PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin complement(4290346..4291914) Clostridium clariflavum DSM 19732 11564069 YP_005048044.1 CDS Clocl_3659 NC_016627.1 4291976 4292194 R hypothetical protein complement(4291976..4292194) Clostridium clariflavum DSM 19732 11564070 YP_005048045.1 CDS Clocl_3660 NC_016627.1 4292248 4293252 R PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain; LysM domain-containing protein complement(4292248..4293252) Clostridium clariflavum DSM 19732 11564071 YP_005048046.1 CDS Clocl_3661 NC_016627.1 4293249 4293668 R PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin; toxin secretion/phage lysis holin complement(4293249..4293668) Clostridium clariflavum DSM 19732 11564072 YP_005048047.1 CDS Clocl_3662 NC_016627.1 4293755 4296223 R PFAM: Glycosyl hydrolases family 18; putative glycosyl hydrolase complement(4293755..4296223) Clostridium clariflavum DSM 19732 11564073 YP_005048048.1 CDS Clocl_3663 NC_016627.1 4296220 4296804 R hypothetical protein complement(4296220..4296804) Clostridium clariflavum DSM 19732 11564074 YP_005048049.1 CDS Clocl_3665 NC_016627.1 4297219 4297413 R hypothetical protein complement(4297219..4297413) Clostridium clariflavum DSM 19732 11564076 YP_005048050.1 CDS Clocl_3666 NC_016627.1 4297424 4298704 R PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region; phage minor structural protein complement(4297424..4298704) Clostridium clariflavum DSM 19732 11564077 YP_005048051.1 CDS Clocl_3667 NC_016627.1 4298756 4299946 R hypothetical protein complement(4298756..4299946) Clostridium clariflavum DSM 19732 11564078 YP_005048052.1 CDS Clocl_3668 NC_016627.1 4300059 4300832 R PFAM: Phage tail protein; TIGRFAM: putative phage tail component, N-terminal domain; phage putative tail component complement(4300059..4300832) Clostridium clariflavum DSM 19732 11564079 YP_005048053.1 CDS Clocl_3669 NC_016627.1 4300846 4303032 R hypothetical protein complement(4300846..4303032) Clostridium clariflavum DSM 19732 11564080 YP_005048054.1 CDS Clocl_3670 NC_016627.1 4303059 4303250 R hypothetical protein complement(4303059..4303250) Clostridium clariflavum DSM 19732 11564081 YP_005048055.1 CDS Clocl_3671 NC_016627.1 4303247 4303630 R hypothetical protein complement(4303247..4303630) Clostridium clariflavum DSM 19732 11564082 YP_005048056.1 CDS Clocl_3673 NC_016627.1 4304293 4304523 R hypothetical protein complement(4304293..4304523) Clostridium clariflavum DSM 19732 11564084 YP_005048057.1 CDS Clocl_3674 NC_016627.1 4304825 4305742 D PFAM: Abi-like protein; abortive infection bacteriophage resistance protein 4304825..4305742 Clostridium clariflavum DSM 19732 11564085 YP_005048058.1 CDS Clocl_3675 NC_016627.1 4305894 4306349 R hypothetical protein complement(4305894..4306349) Clostridium clariflavum DSM 19732 11564086 YP_005048059.1 CDS Clocl_3676 NC_016627.1 4306441 4306743 R PFAM: VRR-NUC domain; Holliday junction resolvase complement(4306441..4306743) Clostridium clariflavum DSM 19732 11564087 YP_005048060.1 CDS Clocl_3677 NC_016627.1 4307045 4308580 R PFAM: HTH domain; putative transcriptional regulator complement(4307045..4308580) Clostridium clariflavum DSM 19732 11564088 YP_005048061.1 CDS Clocl_3678 NC_016627.1 4309199 4309876 D PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 4309199..4309876 Clostridium clariflavum DSM 19732 11564089 YP_005048062.1 CDS Clocl_3679 NC_016627.1 4309873 4312392 D PFAM: Predicted permease; lipoprotein release ABC transporter permease 4309873..4312392 Clostridium clariflavum DSM 19732 11564090 YP_005048063.1 CDS Clocl_3680 NC_016627.1 4312405 4313412 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase complement(4312405..4313412) Clostridium clariflavum DSM 19732 11564091 YP_005048064.1 CDS Clocl_3681 NC_016627.1 4313412 4314086 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(4313412..4314086) Clostridium clariflavum DSM 19732 11564092 YP_005048065.1 CDS Clocl_3682 NC_016627.1 4314504 4315280 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(4314504..4315280) Clostridium clariflavum DSM 19732 11564093 YP_005048066.1 CDS Clocl_3685 NC_016627.1 4317444 4317980 R hypothetical protein complement(4317444..4317980) Clostridium clariflavum DSM 19732 11564096 YP_005048067.1 CDS Clocl_3687 NC_016627.1 4318301 4318552 D PFAM: Transposase; transposase 4318301..4318552 Clostridium clariflavum DSM 19732 11564098 YP_005048068.1 CDS Clocl_3688 NC_016627.1 4318767 4319417 R hypothetical protein complement(4318767..4319417) Clostridium clariflavum DSM 19732 11564099 YP_005048069.1 CDS Clocl_3689 NC_016627.1 4319944 4320963 R PFAM: Transposase DDE domain; transposase complement(4319944..4320963) Clostridium clariflavum DSM 19732 11564100 YP_005048070.1 CDS Clocl_3691 NC_016627.1 4321435 4322733 R PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase complement(4321435..4322733) Clostridium clariflavum DSM 19732 11564102 YP_005048071.1 CDS Clocl_3692 NC_016627.1 4323370 4323855 R PFAM: BFD-like [2Fe-2S] binding domain; BFD-like (2Fe-2S) protein complement(4323370..4323855) Clostridium clariflavum DSM 19732 11564103 YP_005048072.1 CDS Clocl_3693 NC_016627.1 4324013 4324477 R PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase complement(4324013..4324477) Clostridium clariflavum DSM 19732 11564104 YP_005048073.1 CDS Clocl_3694 NC_016627.1 4324564 4326924 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal-translocating P-type ATPase complement(4324564..4326924) Clostridium clariflavum DSM 19732 11564105 YP_005048074.1 CDS Clocl_3695 NC_016627.1 4326938 4327312 R PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator complement(4326938..4327312) Clostridium clariflavum DSM 19732 11564106 YP_005048075.1 CDS Clocl_3697 NC_016627.1 4327812 4329380 R PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin complement(4327812..4329380) Clostridium clariflavum DSM 19732 11564108 YP_005048076.1 CDS Clocl_3698 NC_016627.1 4329343 4329834 R hypothetical protein complement(4329343..4329834) Clostridium clariflavum DSM 19732 11564109 YP_005048077.1 CDS Clocl_3699 NC_016627.1 4329798 4331366 R PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin complement(4329798..4331366) Clostridium clariflavum DSM 19732 11564110 YP_005048078.1 CDS Clocl_3700 NC_016627.1 4331428 4331646 R hypothetical protein complement(4331428..4331646) Clostridium clariflavum DSM 19732 11564111 YP_005048079.1 CDS Clocl_3701 NC_016627.1 4331700 4332704 R PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain; LysM domain-containing protein complement(4331700..4332704) Clostridium clariflavum DSM 19732 11564112 YP_005048080.1 CDS Clocl_3702 NC_016627.1 4332701 4333120 R PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin; holin, Cph1 family complement(4332701..4333120) Clostridium clariflavum DSM 19732 11564113 YP_005048081.1 CDS Clocl_3703 NC_016627.1 4333208 4335676 R PFAM: Glycosyl hydrolases family 18; putative glycosyl hydrolase complement(4333208..4335676) Clostridium clariflavum DSM 19732 11564114 YP_005048082.1 CDS Clocl_3704 NC_016627.1 4335673 4336248 R hypothetical protein complement(4335673..4336248) Clostridium clariflavum DSM 19732 11564115 YP_005048083.1 CDS Clocl_3705 NC_016627.1 4336258 4336452 R hypothetical protein complement(4336258..4336452) Clostridium clariflavum DSM 19732 11564116 YP_005048084.1 CDS Clocl_3706 NC_016627.1 4336463 4338985 R PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region; phage minor structural protein complement(4336463..4338985) Clostridium clariflavum DSM 19732 11564117 YP_005048085.1 CDS Clocl_3707 NC_016627.1 4338990 4339763 R PFAM: Phage tail protein; TIGRFAM: putative phage tail component, N-terminal domain; phage putative tail component complement(4338990..4339763) Clostridium clariflavum DSM 19732 11564118 YP_005048086.1 CDS Clocl_3708 NC_016627.1 4339777 4341963 R hypothetical protein complement(4339777..4341963) Clostridium clariflavum DSM 19732 11564119 YP_005048087.1 CDS Clocl_3709 NC_016627.1 4341991 4342182 R hypothetical protein complement(4341991..4342182) Clostridium clariflavum DSM 19732 11564120 YP_005048088.1 CDS Clocl_3710 NC_016627.1 4342179 4342562 R hypothetical protein complement(4342179..4342562) Clostridium clariflavum DSM 19732 11564121 YP_005048089.1 CDS Clocl_3711 NC_016627.1 4342562 4343161 R TIGRFAM: phage major tail protein, phi13 family; phage major tail protein, phi13 family complement(4342562..4343161) Clostridium clariflavum DSM 19732 11564122 YP_005048090.1 CDS Clocl_3712 NC_016627.1 4343167 4343511 R hypothetical protein complement(4343167..4343511) Clostridium clariflavum DSM 19732 11564123 YP_005048091.1 CDS Clocl_3713 NC_016627.1 4343508 4343939 R PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family; hypothetical protein complement(4343508..4343939) Clostridium clariflavum DSM 19732 11564124 YP_005048092.1 CDS Clocl_3714 NC_016627.1 4343957 4344292 R PFAM: Phage head-tail joining protein; Phage head-tail joining protein complement(4343957..4344292) Clostridium clariflavum DSM 19732 11564125 YP_005048093.1 CDS Clocl_3715 NC_016627.1 4344400 4344708 R PFAM: Phage QLRG family, putative DNA packaging; Phage QLRG family, putative DNA packaging complement(4344400..4344708) Clostridium clariflavum DSM 19732 11564126 YP_005048094.1 CDS Clocl_3716 NC_016627.1 4344729 4345931 R PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family; phage major capsid protein, HK97 family complement(4344729..4345931) Clostridium clariflavum DSM 19732 11564127 YP_005048095.1 CDS Clocl_3717 NC_016627.1 4345982 4346710 R PFAM: Clp protease; protease subunit of ATP-dependent protease complement(4345982..4346710) Clostridium clariflavum DSM 19732 11564128 YP_005048096.1 CDS Clocl_3718 NC_016627.1 4346649 4347971 R PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family; phage portal protein, HK97 family complement(4346649..4347971) Clostridium clariflavum DSM 19732 11564129 YP_005048097.1 CDS Clocl_3719 NC_016627.1 4347968 4349620 R PFAM: Phage Terminase; phage terminase-like protein, large subunit complement(4347968..4349620) Clostridium clariflavum DSM 19732 11564130 YP_005048098.1 CDS Clocl_3720 NC_016627.1 4349675 4349869 R hypothetical protein complement(4349675..4349869) Clostridium clariflavum DSM 19732 11564131 YP_005048099.1 CDS Clocl_3721 NC_016627.1 4349873 4350340 R PFAM: AIG2-like family; AIG2-like family protein complement(4349873..4350340) Clostridium clariflavum DSM 19732 11564132 YP_005048100.1 CDS Clocl_3722 NC_016627.1 4350402 4351301 R PFAM: Putative amidoligase enzyme; amidoligase enzyme complement(4350402..4351301) Clostridium clariflavum DSM 19732 11564133 YP_005048101.1 CDS Clocl_3723 NC_016627.1 4351443 4351673 R hypothetical protein complement(4351443..4351673) Clostridium clariflavum DSM 19732 11564134 YP_005048102.1 CDS Clocl_3724 NC_016627.1 4351670 4352005 R hypothetical protein complement(4351670..4352005) Clostridium clariflavum DSM 19732 11564135 YP_005048103.1 CDS Clocl_3725 NC_016627.1 4351998 4352690 R hypothetical protein complement(4351998..4352690) Clostridium clariflavum DSM 19732 11564136 YP_005048104.1 CDS Clocl_3726 NC_016627.1 4352807 4354060 R PFAM: DNA methylase; ParB-like nuclease domain; DNA modification methylase complement(4352807..4354060) Clostridium clariflavum DSM 19732 11564137 YP_005048105.1 CDS Clocl_3727 NC_016627.1 4354066 4355364 R PFAM: ParB-like nuclease domain; DNA methylase; DNA modification methylase complement(4354066..4355364) Clostridium clariflavum DSM 19732 11564138 YP_005048106.1 CDS Clocl_3728 NC_016627.1 4355339 4355521 R hypothetical protein complement(4355339..4355521) Clostridium clariflavum DSM 19732 11564139 YP_005048107.1 CDS Clocl_3729 NC_016627.1 4355521 4356072 R PFAM: Phage terminase, small subunit; Phage terminase, small subunit complement(4355521..4356072) Clostridium clariflavum DSM 19732 11564140 YP_005048108.1 CDS Clocl_3730 NC_016627.1 4356193 4356552 R PFAM: HNH endonuclease; restriction endonuclease complement(4356193..4356552) Clostridium clariflavum DSM 19732 11564141 YP_005048109.1 CDS Clocl_3731 NC_016627.1 4356686 4356916 R hypothetical protein complement(4356686..4356916) Clostridium clariflavum DSM 19732 11564142 YP_005048110.1 CDS Clocl_3732 NC_016627.1 4357041 4357496 R hypothetical protein complement(4357041..4357496) Clostridium clariflavum DSM 19732 11564143 YP_005048111.1 CDS Clocl_3733 NC_016627.1 4357588 4357890 R PFAM: VRR-NUC domain; Holliday junction resolvase complement(4357588..4357890) Clostridium clariflavum DSM 19732 11564144 YP_005048112.1 CDS Clocl_3734 NC_016627.1 4358190 4360745 R PFAM: Bifunctional DNA primase/polymerase, N-terminal; bifunctional DNA primase/polymerase famiily protein complement(4358190..4360745) Clostridium clariflavum DSM 19732 11564145 YP_005048113.1 CDS Clocl_3735 NC_016627.1 4360742 4361167 R hypothetical protein complement(4360742..4361167) Clostridium clariflavum DSM 19732 11564146 YP_005048114.1 CDS Clocl_3736 NC_016627.1 4361183 4362004 R PFAM: BRO family, N-terminal domain; Phage antirepressor protein KilAC domain; prophage antirepressor complement(4361183..4362004) Clostridium clariflavum DSM 19732 11564147 YP_005048115.1 CDS Clocl_3737 NC_016627.1 4362009 4363931 R PFAM: 3'-5' exonuclease; DNA polymerase family A; DNA polymerase I family protein complement(4362009..4363931) Clostridium clariflavum DSM 19732 11564148 YP_005048116.1 CDS Clocl_3738 NC_016627.1 4363989 4364741 R hypothetical protein complement(4363989..4364741) Clostridium clariflavum DSM 19732 11564149 YP_005048117.1 CDS Clocl_3739 NC_016627.1 4364863 4365288 R manually curated; hypothetical protein complement(4364863..4365288) Clostridium clariflavum DSM 19732 11564150 YP_005048118.1 CDS Clocl_3740 NC_016627.1 4365269 4366714 R PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; manually curated; DNA/RNA helicase complement(4365269..4366714) Clostridium clariflavum DSM 19732 11564151 YP_005048119.1 CDS Clocl_3741 NC_016627.1 4366704 4366895 R hypothetical protein complement(4366704..4366895) Clostridium clariflavum DSM 19732 11564152 YP_005048120.1 CDS Clocl_3742 NC_016627.1 4366971 4367363 R PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(4366971..4367363) Clostridium clariflavum DSM 19732 11564153 YP_005048121.1 CDS Clocl_3743 NC_016627.1 4367617 4368210 D hypothetical protein 4367617..4368210 Clostridium clariflavum DSM 19732 11564154 YP_005048122.1 CDS Clocl_3744 NC_016627.1 4368022 4368936 R hypothetical protein complement(4368022..4368936) Clostridium clariflavum DSM 19732 11564155 YP_005048123.1 CDS Clocl_3745 NC_016627.1 4368920 4369462 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(4368920..4369462) Clostridium clariflavum DSM 19732 11564156 YP_005048124.1 CDS Clocl_3746 NC_016627.1 4369612 4370151 R PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein complement(4369612..4370151) Clostridium clariflavum DSM 19732 11564157 YP_005048125.1 CDS Clocl_3747 NC_016627.1 4370197 4370901 R hypothetical protein complement(4370197..4370901) Clostridium clariflavum DSM 19732 11564158 YP_005048126.1 CDS Clocl_3748 NC_016627.1 4371132 4371527 D hypothetical protein 4371132..4371527 Clostridium clariflavum DSM 19732 11564159 YP_005048127.1 CDS Clocl_3749 NC_016627.1 4371357 4372727 R PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA (uracil-5-)-methyltransferase RumA complement(4371357..4372727) Clostridium clariflavum DSM 19732 11564160 YP_005048128.1 CDS Clocl_3750 NC_016627.1 4373266 4374033 R PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis complement(4373266..4374033) Clostridium clariflavum DSM 19732 11564161 YP_005048129.1 CDS Clocl_3752 NC_016627.1 4374717 4375457 R PFAM: RibD C-terminal domain; pyrimidine reductase, riboflavin biosynthesis complement(4374717..4375457) Clostridium clariflavum DSM 19732 11564163 YP_005048130.1 CDS Clocl_3753 NC_016627.1 4375545 4376144 R TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein complement(4375545..4376144) Clostridium clariflavum DSM 19732 11564164 YP_005048131.1 CDS Clocl_3754 NC_016627.1 4376214 4376567 R PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; transcriptional regulator, Spx/MgsR family complement(4376214..4376567) Clostridium clariflavum DSM 19732 11564165 YP_005048132.1 CDS Clocl_3755 NC_016627.1 4376845 4377741 R PFAM: Protein of unknown function (DUF3298); hypothetical protein complement(4376845..4377741) Clostridium clariflavum DSM 19732 11564166 YP_005048133.1 CDS Clocl_3756 NC_016627.1 4377743 4378246 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma subunit, SigV complement(4377743..4378246) Clostridium clariflavum DSM 19732 11564167 YP_005048134.1 CDS Clocl_3757 NC_016627.1 4378457 4379239 R hypothetical protein complement(4378457..4379239) Clostridium clariflavum DSM 19732 11564168 YP_005048135.1 CDS Clocl_3758 NC_016627.1 4379355 4380773 R PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase complement(4379355..4380773) Clostridium clariflavum DSM 19732 11564169 YP_005048136.1 CDS Clocl_3759 NC_016627.1 4380715 4381986 R PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(4380715..4381986) Clostridium clariflavum DSM 19732 11564170 YP_005048137.1 CDS Clocl_3760 NC_016627.1 4382502 4383278 R PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase complement(4382502..4383278) Clostridium clariflavum DSM 19732 11564171 YP_005048138.1 CDS Clocl_3761 NC_016627.1 4383678 4384940 R PFAM: McrBC 5-methylcytosine restriction system component; McrBC 5-methylcytosine restriction system component complement(4383678..4384940) Clostridium clariflavum DSM 19732 11564172 YP_005048139.1 CDS Clocl_3762 NC_016627.1 4384943 4387237 R PFAM: AAA domain (dynein-related subfamily); GTPase subunit of restriction endonuclease complement(4384943..4387237) Clostridium clariflavum DSM 19732 11564173 YP_005048140.1 CDS Clocl_3763 NC_016627.1 4387310 4388002 R hypothetical protein complement(4387310..4388002) Clostridium clariflavum DSM 19732 11564174 YP_005048141.1 CDS Clocl_3764 NC_016627.1 4387999 4388445 R flavodoxin complement(4387999..4388445) Clostridium clariflavum DSM 19732 11564175 YP_005048142.1 CDS Clocl_3765 NC_016627.1 4389025 4389810 R PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein complement(4389025..4389810) Clostridium clariflavum DSM 19732 11564176 YP_005048143.1 CDS Clocl_3766 NC_016627.1 4389826 4390488 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family complement(4389826..4390488) Clostridium clariflavum DSM 19732 11564177 YP_005048144.1 CDS Clocl_3767 NC_016627.1 4390573 4391382 R PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein complement(4390573..4391382) Clostridium clariflavum DSM 19732 11564178 YP_005048145.1 CDS Clocl_3768 NC_016627.1 4391562 4391876 D hypothetical protein 4391562..4391876 Clostridium clariflavum DSM 19732 11564179 YP_005048146.1 CDS Clocl_3769 NC_016627.1 4391999 4392205 R PFAM: Helix-turn-helix; putative transcriptional regulator complement(4391999..4392205) Clostridium clariflavum DSM 19732 11564180 YP_005048147.1 CDS Clocl_3770 NC_016627.1 4392216 4392698 R hypothetical protein complement(4392216..4392698) Clostridium clariflavum DSM 19732 11564181 YP_005048148.1 CDS Clocl_3771 NC_016627.1 4393107 4393646 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; O-6-methylguanine DNA methyltransferase complement(4393107..4393646) Clostridium clariflavum DSM 19732 11564182 YP_005048149.1 CDS Clocl_3773 NC_016627.1 4394032 4394421 D hypothetical protein 4394032..4394421 Clostridium clariflavum DSM 19732 11564184 YP_005048150.1 CDS Clocl_3774 NC_016627.1 4394227 4395090 R PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein complement(4394227..4395090) Clostridium clariflavum DSM 19732 11564185 YP_005048151.1 CDS Clocl_3775 NC_016627.1 4395118 4395891 R PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein complement(4395118..4395891) Clostridium clariflavum DSM 19732 11564186 YP_005048152.1 CDS Clocl_3776 NC_016627.1 4395879 4396556 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter complement(4395879..4396556) Clostridium clariflavum DSM 19732 11564187 YP_005048153.1 CDS Clocl_3777 NC_016627.1 4396537 4397202 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter complement(4396537..4397202) Clostridium clariflavum DSM 19732 11564188 YP_005048154.1 CDS Clocl_3778 NC_016627.1 4397565 4397678 D hypothetical protein 4397565..4397678 Clostridium clariflavum DSM 19732 11564189 YP_005048155.1 CDS Clocl_3779 NC_016627.1 4398215 4399444 R PFAM: Transposase, Mutator family; transposase complement(4398215..4399444) Clostridium clariflavum DSM 19732 11564190 YP_005048156.1 CDS Clocl_3780 NC_016627.1 4399629 4399934 R PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator complement(4399629..4399934) Clostridium clariflavum DSM 19732 11564191 YP_005048157.1 CDS Clocl_3781 NC_016627.1 4399936 4400541 R hypothetical protein complement(4399936..4400541) Clostridium clariflavum DSM 19732 11564192 YP_005048158.1 CDS Clocl_3782 NC_016627.1 4400774 4400926 D hypothetical protein 4400774..4400926 Clostridium clariflavum DSM 19732 11564193 YP_005048159.1 CDS Clocl_3783 NC_016627.1 4401082 4401966 R PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; ABC-type metal ion transport system, periplasmic component/surface antigen complement(4401082..4401966) Clostridium clariflavum DSM 19732 11564194 YP_005048160.1 CDS Clocl_3784 NC_016627.1 4401988 4402698 R PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type metal ion transport system permease complement(4401988..4402698) Clostridium clariflavum DSM 19732 11564195 YP_005048161.1 CDS Clocl_3785 NC_016627.1 4402738 4403535 R PFAM: ABC transporter; ABC-type metal ion transport system, ATPase component complement(4402738..4403535) Clostridium clariflavum DSM 19732 11564196 YP_005048162.1 CDS Clocl_3786 NC_016627.1 4403980 4404426 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator complement(4403980..4404426) Clostridium clariflavum DSM 19732 11564197 YP_005048163.1 CDS Clocl_3787 NC_016627.1 4404679 4405218 D PFAM: Acetyltransferase (GNAT) family; acetyltransferase 4404679..4405218 Clostridium clariflavum DSM 19732 11564198 YP_005048164.1 CDS Clocl_3788 NC_016627.1 4405163 4406638 D PFAM: Nitrogenase component 1 type Oxidoreductase; manually curated; nitrogenase molybdenum-iron protein, alpha and beta chains 4405163..4406638 Clostridium clariflavum DSM 19732 11564199 YP_005048165.1 CDS Clocl_3789 NC_016627.1 4406635 4407978 D PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains 4406635..4407978 Clostridium clariflavum DSM 19732 11564200 YP_005048166.1 CDS Clocl_3790 NC_016627.1 4408171 4409721 D PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4408171..4409721 Clostridium clariflavum DSM 19732 11564201 YP_005048167.1 CDS Clocl_3792 NC_016627.1 4410585 4411343 D PFAM: IstB-like ATP binding protein; DNA replication protein 4410585..4411343 Clostridium clariflavum DSM 19732 11564203 YP_005048168.1 CDS Clocl_3794 NC_016627.1 4412278 4413537 D PFAM: Transposase, Mutator family; transposase 4412278..4413537 Clostridium clariflavum DSM 19732 11564205 YP_005048169.1 CDS Clocl_3795 NC_016627.1 4414126 4415517 R PFAM: Transposase DDE domain; transposase family protein complement(4414126..4415517) Clostridium clariflavum DSM 19732 11564206 YP_005048170.1 CDS Clocl_3796 NC_016627.1 4415644 4416591 R PFAM: HlyD family secretion protein; multidrug resistance efflux pump complement(4415644..4416591) Clostridium clariflavum DSM 19732 11564207 YP_005048171.1 CDS Clocl_3797 NC_016627.1 4416588 4417271 R PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase complement(4416588..4417271) Clostridium clariflavum DSM 19732 11564208 YP_005048172.1 CDS Clocl_3798 NC_016627.1 4417344 4419833 R PFAM: Predicted permease; lipoprotein release ABC transporter permease complement(4417344..4419833) Clostridium clariflavum DSM 19732 11564209 YP_005048173.1 CDS Clocl_3799 NC_016627.1 4419937 4420773 R hypothetical protein complement(4419937..4420773) Clostridium clariflavum DSM 19732 11564210 YP_005048174.1 CDS Clocl_3800 NC_016627.1 4420770 4421336 R PFAM: Protein of unknown function (DUF1700); manually curated; hypothetical protein complement(4420770..4421336) Clostridium clariflavum DSM 19732 11564211 YP_005048175.1 CDS Clocl_3801 NC_016627.1 4421341 4421673 R PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator complement(4421341..4421673) Clostridium clariflavum DSM 19732 11564212 YP_005048176.1 CDS Clocl_3802 NC_016627.1 4421972 4422124 R hypothetical protein complement(4421972..4422124) Clostridium clariflavum DSM 19732 11564213 YP_005048177.1 CDS Clocl_3803 NC_016627.1 4422194 4423471 R manually curated; hypothetical protein complement(4422194..4423471) Clostridium clariflavum DSM 19732 11564214 YP_005048178.1 CDS Clocl_3804 NC_016627.1 4423494 4423631 R hypothetical protein complement(4423494..4423631) Clostridium clariflavum DSM 19732 11564215 YP_005048179.1 CDS Clocl_3805 NC_016627.1 4423725 4423871 R hypothetical protein complement(4423725..4423871) Clostridium clariflavum DSM 19732 11564216 YP_005048180.1 CDS Clocl_3806 NC_016627.1 4424292 4425581 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4424292..4425581 Clostridium clariflavum DSM 19732 11564217 YP_005048181.1 CDS Clocl_3807 NC_016627.1 4425849 4425986 R hypothetical protein complement(4425849..4425986) Clostridium clariflavum DSM 19732 11564218 YP_005048182.1 CDS Clocl_3808 NC_016627.1 4426212 4426505 D PFAM: Transposase; transposase 4426212..4426505 Clostridium clariflavum DSM 19732 11564219 YP_005048183.1 CDS Clocl_3809 NC_016627.1 4426465 4427364 D PFAM: Integrase core domain; transposase 4426465..4427364 Clostridium clariflavum DSM 19732 11564220 YP_005048184.1 CDS Clocl_3810 NC_016627.1 4428371 4429774 R PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(4428371..4429774) Clostridium clariflavum DSM 19732 11564221 YP_005048185.1 CDS Clocl_3811 NC_016627.1 4430062 4430706 R PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis complement(4430062..4430706) Clostridium clariflavum DSM 19732 11564222 YP_005048186.1 CDS Clocl_3812 NC_016627.1 4430873 4432012 R PFAM: SPFH domain / Band 7 family; putative virion core protein (lumpy skin disease virus) complement(4430873..4432012) Clostridium clariflavum DSM 19732 11564223 YP_005048187.1 CDS Clocl_3813 NC_016627.1 4432479 4433402 D PFAM: FlgN protein; Peptidase family M23; metalloendopeptidase-like membrane protein 4432479..4433402 Clostridium clariflavum DSM 19732 11564224 YP_005048188.1 CDS Clocl_3814 NC_016627.1 4433420 4433839 D PFAM: Protein of unknown function, DUF583; Integral membrane protein CcmA involved in cell shape determination 4433420..4433839 Clostridium clariflavum DSM 19732 11564225 YP_005048189.1 CDS Clocl_3815 NC_016627.1 4433945 4434607 R PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB; sporulation protein YunB complement(4433945..4434607) Clostridium clariflavum DSM 19732 11564226 YP_005048190.1 CDS Clocl_3816 NC_016627.1 4434868 4437270 D PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; penicillin-binding protein 4434868..4437270 Clostridium clariflavum DSM 19732 11564227 YP_005048191.1 CDS Clocl_3817 NC_016627.1 4437460 4439082 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(4437460..4439082) Clostridium clariflavum DSM 19732 11564228 YP_005048192.1 CDS Clocl_3818 NC_016627.1 4439213 4440424 R PFAM: Predicted permease; lipoprotein release ABC transporter permease complement(4439213..4440424) Clostridium clariflavum DSM 19732 11564229 YP_005048193.1 CDS Clocl_3819 NC_016627.1 4440439 4441716 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; multidrug resistance efflux pump complement(4440439..4441716) Clostridium clariflavum DSM 19732 11564230 YP_005048194.1 CDS Clocl_3820 NC_016627.1 4441791 4442525 R PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase complement(4441791..4442525) Clostridium clariflavum DSM 19732 11564231 YP_005048195.1 CDS Clocl_3821 NC_016627.1 4442672 4443757 R PFAM: Outer membrane efflux protein; outer membrane protein complement(4442672..4443757) Clostridium clariflavum DSM 19732 11564232 YP_005048196.1 CDS Clocl_3822 NC_016627.1 4443763 4444926 R hypothetical protein complement(4443763..4444926) Clostridium clariflavum DSM 19732 11564233 YP_005048197.1 CDS Clocl_3823 NC_016627.1 4444931 4445755 R PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase complement(4444931..4445755) Clostridium clariflavum DSM 19732 11564234 YP_005048198.1 CDS Clocl_3824 NC_016627.1 4446130 4446858 D PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family; hypothetical protein 4446130..4446858 Clostridium clariflavum DSM 19732 11564235 YP_005048199.1 CDS Clocl_3825 NC_016627.1 4447025 4448026 R hypothetical protein complement(4447025..4448026) Clostridium clariflavum DSM 19732 11564236 YP_005048200.1 CDS Clocl_3826 NC_016627.1 4448056 4448748 R hypothetical protein complement(4448056..4448748) Clostridium clariflavum DSM 19732 11564237 YP_005048201.1 CDS Clocl_3827 NC_016627.1 4449065 4449394 R PFAM: Protein of unknown function, DUF486; hypothetical protein complement(4449065..4449394) Clostridium clariflavum DSM 19732 11564238 YP_005048202.1 CDS Clocl_3828 NC_016627.1 4449415 4450617 R manually curated; hypothetical protein complement(4449415..4450617) Clostridium clariflavum DSM 19732 11564239 YP_005048203.1 CDS Clocl_3829 NC_016627.1 4450932 4451321 D hypothetical protein 4450932..4451321 Clostridium clariflavum DSM 19732 11564240 YP_005048204.1 CDS Clocl_3830 NC_016627.1 4451316 4451660 R hypothetical protein complement(4451316..4451660) Clostridium clariflavum DSM 19732 11564241 YP_005048205.1 CDS Clocl_3831 NC_016627.1 4451865 4452173 D PFAM: Carbohydrate binding domain (family 25); Carbohydrate binding domain (family 25) 4451865..4452173 Clostridium clariflavum DSM 19732 11564242 YP_005048206.1 CDS Clocl_3832 NC_016627.1 4452223 4454148 R PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; aconitate hydratase, putative, Aquifex type complement(4452223..4454148) Clostridium clariflavum DSM 19732 11564243 YP_005048207.1 CDS Clocl_3833 NC_016627.1 4454342 4455694 R PFAM: Citrate synthase; citrate synthase complement(4454342..4455694) Clostridium clariflavum DSM 19732 11564244 YP_005048208.1 CDS Clocl_3834 NC_016627.1 4455688 4456359 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator complement(4455688..4456359) Clostridium clariflavum DSM 19732 11564245 YP_005048209.1 CDS Clocl_3835 NC_016627.1 4456840 4457739 D PFAM: Protein of unknown function (DUF445); hypothetical protein 4456840..4457739 Clostridium clariflavum DSM 19732 11564246 YP_005048210.1 CDS Clocl_3836 NC_016627.1 4457797 4458711 R hypothetical protein complement(4457797..4458711) Clostridium clariflavum DSM 19732 11564247 YP_005048211.1 CDS Clocl_3838 NC_016627.1 4459751 4462171 R PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; putative ATP-dependent protease complement(4459751..4462171) Clostridium clariflavum DSM 19732 11564249 YP_005048212.1 CDS Clocl_3839 NC_016627.1 4462662 4463117 R PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(4462662..4463117) Clostridium clariflavum DSM 19732 11564250 YP_005048213.1 CDS Clocl_3840 NC_016627.1 4463117 4463833 R PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; hypothetical protein complement(4463117..4463833) Clostridium clariflavum DSM 19732 11564251 YP_005048214.1 CDS Clocl_3841 NC_016627.1 4463882 4464349 R PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; YjeE family ATPase complement(4463882..4464349) Clostridium clariflavum DSM 19732 11564252 YP_005048215.1 CDS Clocl_3842 NC_016627.1 4464346 4465524 R PFAM: Amidohydrolase family; amidohydrolase complement(4464346..4465524) Clostridium clariflavum DSM 19732 11564253 YP_005048216.1 CDS Clocl_3843 NC_016627.1 4465817 4466266 D hypothetical protein 4465817..4466266 Clostridium clariflavum DSM 19732 11564254 YP_005048217.1 CDS Clocl_3844 NC_016627.1 4466434 4467597 R PFAM: Major Facilitator Superfamily; fucose permease complement(4466434..4467597) Clostridium clariflavum DSM 19732 11564255 YP_005048218.1 CDS Clocl_3845 NC_016627.1 4467668 4468852 R PFAM: FtsH Extracellular; ATPase family associated with various cellular activities (AAA); ATP-dependent Zn protease complement(4467668..4468852) Clostridium clariflavum DSM 19732 11564256 YP_005048219.1 CDS Clocl_3846 NC_016627.1 4469011 4469328 D PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator 4469011..4469328 Clostridium clariflavum DSM 19732 11564257 YP_005048220.1 CDS Clocl_3847 NC_016627.1 4469325 4469834 D PFAM: Protein of unknown function (DUF2812); hypothetical protein 4469325..4469834 Clostridium clariflavum DSM 19732 11564258 YP_005048221.1 CDS Clocl_3848 NC_016627.1 4469993 4471339 D manually curated; hypothetical protein 4469993..4471339 Clostridium clariflavum DSM 19732 11564259 YP_005048222.1 CDS Clocl_3849 NC_016627.1 4471460 4472581 R PFAM: Aldo/keto reductase family; putative oxidoreductase of aldo/keto reductase family complement(4471460..4472581) Clostridium clariflavum DSM 19732 11564260 YP_005048223.1 CDS Clocl_3851 NC_016627.1 4473677 4473958 D hypothetical protein 4473677..4473958 Clostridium clariflavum DSM 19732 11564262 YP_005048224.1 CDS Clocl_3852 NC_016627.1 4474224 4475453 R PFAM: Transposase, Mutator family; transposase complement(4474224..4475453) Clostridium clariflavum DSM 19732 11564263 YP_005048225.1 CDS Clocl_3853 NC_016627.1 4475647 4476399 D hypothetical protein 4475647..4476399 Clostridium clariflavum DSM 19732 11564264 YP_005048226.1 CDS Clocl_3854 NC_016627.1 4476829 4477203 R PFAM: Protein of unknown function (DUF1696); hypothetical protein complement(4476829..4477203) Clostridium clariflavum DSM 19732 11564265 YP_005048227.1 CDS Clocl_3855 NC_016627.1 4477466 4478350 R PFAM: MerR family regulatory protein; manually curated; putative transcriptional regulator complement(4477466..4478350) Clostridium clariflavum DSM 19732 11564266 YP_005048228.1 CDS Clocl_3856 NC_016627.1 4478667 4478912 R hypothetical protein complement(4478667..4478912) Clostridium clariflavum DSM 19732 11564267 YP_005048229.1 CDS Clocl_3857 NC_016627.1 4479190 4479582 R PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 complement(4479190..4479582) Clostridium clariflavum DSM 19732 11564268 YP_005048230.1 CDS Clocl_3858 NC_016627.1 4479610 4480038 R PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 complement(4479610..4480038) Clostridium clariflavum DSM 19732 11564269 YP_005048231.1 CDS Clocl_3859 NC_016627.1 4480379 4481113 R PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; pseudouridylate synthase I complement(4480379..4481113) Clostridium clariflavum DSM 19732 11564270 YP_005048232.1 CDS Clocl_3860 NC_016627.1 4481276 4482220 R PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); ROK family protein, putative glucokinase complement(4481276..4482220) Clostridium clariflavum DSM 19732 11564271 YP_005048233.1 CDS Clocl_3861 NC_016627.1 4482355 4483143 R PFAM: Cobalt transport protein; ABC-type cobalt transport system, permease component CbiQ complement(4482355..4483143) Clostridium clariflavum DSM 19732 11560605 YP_005048234.1 CDS Clocl_3862 NC_016627.1 4483217 4484080 R PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; manually curated; cobalt ABC transporter ATPase complement(4483217..4484080) Clostridium clariflavum DSM 19732 11560606 YP_005048235.1 CDS Clocl_3863 NC_016627.1 4484327 4484920 D PFAM: Methyltransferase small domain; 16S RNA G1207 methylase RsmC 4484327..4484920 Clostridium clariflavum DSM 19732 11560607 YP_005048236.1 CDS Clocl_3864 NC_016627.1 4485051 4485899 R PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; cobalt ABC transporter ATPase complement(4485051..4485899) Clostridium clariflavum DSM 19732 11560608 YP_005048237.1 CDS Clocl_3865 NC_016627.1 4486044 4486568 R PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 complement(4486044..4486568) Clostridium clariflavum DSM 19732 11560609 YP_005048238.1 CDS Clocl_3866 NC_016627.1 4486614 4487561 R PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha complement(4486614..4487561) Clostridium clariflavum DSM 19732 11560610 YP_005048239.1 CDS Clocl_3867 NC_016627.1 4487764 4488390 R PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 complement(4487764..4488390) Clostridium clariflavum DSM 19732 11560611 YP_005048240.1 CDS Clocl_3868 NC_016627.1 4488468 4488872 R PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 complement(4488468..4488872) Clostridium clariflavum DSM 19732 11560612 YP_005048241.1 CDS Clocl_3869 NC_016627.1 4488894 4489265 R PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 complement(4488894..4489265) Clostridium clariflavum DSM 19732 11560613 YP_005048242.1 CDS Clocl_3870 NC_016627.1 4489551 4489664 R PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 complement(4489551..4489664) Clostridium clariflavum DSM 19732 11560614 YP_005048243.1 CDS Clocl_3871 NC_016627.1 4489787 4490005 R PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor IF-1 complement(4489787..4490005) Clostridium clariflavum DSM 19732 11560615 YP_005048244.1 CDS Clocl_3872 NC_016627.1 4490138 4490404 R 50S ribosomal protein L14E complement(4490138..4490404) Clostridium clariflavum DSM 19732 11560616 YP_005048245.1 CDS Clocl_3873 NC_016627.1 4490435 4491205 R PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase complement(4490435..4491205) Clostridium clariflavum DSM 19732 11560617 YP_005048246.1 CDS Clocl_3874 NC_016627.1 4491206 4491853 R PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase family protein complement(4491206..4491853) Clostridium clariflavum DSM 19732 11560618 YP_005048247.1 CDS Clocl_3875 NC_016627.1 4492201 4493490 R PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit secY/sec61 alpha complement(4492201..4493490) Clostridium clariflavum DSM 19732 11560619 YP_005048248.1 CDS Clocl_3876 NC_016627.1 4493492 4493935 R PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 complement(4493492..4493935) Clostridium clariflavum DSM 19732 11560620 YP_005048249.1 CDS Clocl_3877 NC_016627.1 4493951 4494130 R PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 complement(4493951..4494130) Clostridium clariflavum DSM 19732 11560621 YP_005048250.1 CDS Clocl_3878 NC_016627.1 4494143 4494643 R PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 complement(4494143..4494643) Clostridium clariflavum DSM 19732 11560622 YP_005048251.1 CDS Clocl_3879 NC_016627.1 4494662 4495030 R PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 complement(4494662..4495030) Clostridium clariflavum DSM 19732 11560623 YP_005048252.1 CDS Clocl_3880 NC_016627.1 4495047 4495595 R PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 complement(4495047..4495595) Clostridium clariflavum DSM 19732 11560624 YP_005048253.1 CDS Clocl_3881 NC_016627.1 4495700 4496098 R PFAM: Ribosomal protein S8; 30S ribosomal protein S8 complement(4495700..4496098) Clostridium clariflavum DSM 19732 11560625 YP_005048254.1 CDS Clocl_3882 NC_016627.1 4496124 4496309 R PFAM: Ribosomal protein S14p/S29e; manually curated; 30S ribosomal protein S14 complement(4496124..4496309) Clostridium clariflavum DSM 19732 11560626 YP_005048255.1 CDS Clocl_3883 NC_016627.1 4496325 4496867 R PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 complement(4496325..4496867) Clostridium clariflavum DSM 19732 11560627 YP_005048256.1 CDS Clocl_3884 NC_016627.1 4496896 4497243 R PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 complement(4496896..4497243) Clostridium clariflavum DSM 19732 11560628 YP_005048257.1 CDS Clocl_3885 NC_016627.1 4497262 4497630 R PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 complement(4497262..4497630) Clostridium clariflavum DSM 19732 11560629 YP_005048258.1 CDS Clocl_3886 NC_016627.1 4497656 4497916 R PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 complement(4497656..4497916) Clostridium clariflavum DSM 19732 11560630 YP_005048259.1 CDS Clocl_3887 NC_016627.1 4497945 4498148 R PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 complement(4497945..4498148) Clostridium clariflavum DSM 19732 11560631 YP_005048260.1 CDS Clocl_3888 NC_016627.1 4498138 4498575 R PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 complement(4498138..4498575) Clostridium clariflavum DSM 19732 11560632 YP_005048261.1 CDS Clocl_3889 NC_016627.1 4498575 4499243 R PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; ribosomal protein S3, eukaryotic/archaeal type; 30S ribosomal protein S3 complement(4498575..4499243) Clostridium clariflavum DSM 19732 11560633 YP_005048262.1 CDS Clocl_3890 NC_016627.1 4499263 4499685 R PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; manually curated; 50S ribosomal protein L22 complement(4499263..4499685) Clostridium clariflavum DSM 19732 11560634 YP_005048263.1 CDS Clocl_3891 NC_016627.1 4499775 4500059 R PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; manually curated; 30S ribosomal protein S19 complement(4499775..4500059) Clostridium clariflavum DSM 19732 11560635 YP_005048264.1 CDS Clocl_3892 NC_016627.1 4500148 4500981 R PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 complement(4500148..4500981) Clostridium clariflavum DSM 19732 11560636 YP_005048265.1 CDS Clocl_3893 NC_016627.1 4501024 4501377 R PFAM: Ribosomal protein L23; 50S ribosomal protein L23 complement(4501024..4501377) Clostridium clariflavum DSM 19732 11560637 YP_005048266.1 CDS Clocl_3894 NC_016627.1 4501377 4502000 R PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 complement(4501377..4502000) Clostridium clariflavum DSM 19732 11560638 YP_005048267.1 CDS Clocl_3895 NC_016627.1 4502024 4502662 R PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 complement(4502024..4502662) Clostridium clariflavum DSM 19732 11560639 YP_005048268.1 CDS Clocl_3896 NC_016627.1 4502753 4503064 R PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 complement(4502753..4503064) Clostridium clariflavum DSM 19732 11560640 YP_005048269.1 CDS Clocl_3897 NC_016627.1 4503955 4504266 R PFAM: TM2 domain; hypothetical protein complement(4503955..4504266) Clostridium clariflavum DSM 19732 11560641 YP_005048270.1 CDS Clocl_3902 NC_016627.1 4510663 4512258 R PFAM: Polysaccharide biosynthesis protein; membrane protein involved in the export of O-antigen and teichoic acid complement(4510663..4512258) Clostridium clariflavum DSM 19732 11560646 YP_005048271.1 CDS Clocl_3907 NC_016627.1 4518888 4519310 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor complement(4518888..4519310) Clostridium clariflavum DSM 19732 11560651 YP_005048272.1 CDS Clocl_3908 NC_016627.1 4519441 4520199 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; sigma-B/F/G subfamily RNA polymerase sigma-70 factor complement(4519441..4520199) Clostridium clariflavum DSM 19732 11560652 YP_005048273.1 CDS Clocl_3909 NC_016627.1 4520202 4520582 R anti-sigma regulatory factor complement(4520202..4520582) Clostridium clariflavum DSM 19732 11560653 YP_005048274.1 CDS Clocl_3910 NC_016627.1 4520598 4520912 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor complement(4520598..4520912) Clostridium clariflavum DSM 19732 11560654 YP_005048275.1 CDS Clocl_3911 NC_016627.1 4521422 4522942 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase (class II) complement(4521422..4522942) Clostridium clariflavum DSM 19732 11560655 YP_005048276.1 CDS Clocl_3912 NC_016627.1 4523176 4523652 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA complement(4523176..4523652) Clostridium clariflavum DSM 19732 11560656 YP_005048277.1 CDS Clocl_3913 NC_016627.1 4524184 4525164 R hypothetical protein complement(4524184..4525164) Clostridium clariflavum DSM 19732 11560657 YP_005048278.1 CDS Clocl_3914 NC_016627.1 4525300 4527057 R PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18; Bacterial SH3 domain; putative glycosyl hydrolase complement(4525300..4527057) Clostridium clariflavum DSM 19732 11560658 YP_005048279.1 CDS Clocl_3915 NC_016627.1 4527226 4527729 R hypothetical protein complement(4527226..4527729) Clostridium clariflavum DSM 19732 11560659 YP_005048280.1 CDS Clocl_3916 NC_016627.1 4527752 4528795 R PFAM: PilZ domain; PilZ domain-containing protein complement(4527752..4528795) Clostridium clariflavum DSM 19732 11560660 YP_005048281.1 CDS Clocl_3917 NC_016627.1 4529093 4531726 R PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; Carbohydrate binding domain; N-terminal ig-like domain of cellulase; putative carbohydrate binding protein,dockerin-like protein complement(4529093..4531726) Clostridium clariflavum DSM 19732 11560661 YP_005048282.1 CDS Clocl_3918 NC_016627.1 4532396 4534033 R PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroL complement(4532396..4534033) Clostridium clariflavum DSM 19732 11560662 YP_005048283.1 CDS Clocl_3919 NC_016627.1 4534219 4534503 R PFAM: Chaperonin 10 Kd subunit; Co-chaperonin GroES complement(4534219..4534503) Clostridium clariflavum DSM 19732 11560663 YP_005048284.1 CDS Clocl_3920 NC_016627.1 4535018 4537837 R PFAM: Dockerin type I repeat; dockerin-like protein complement(4535018..4537837) Clostridium clariflavum DSM 19732 11560664 YP_005048285.1 CDS Clocl_3921 NC_016627.1 4538012 4539151 R PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain complement(4538012..4539151) Clostridium clariflavum DSM 19732 11560665 YP_005048286.1 CDS Clocl_3922 NC_016627.1 4539173 4539832 R PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase complement(4539173..4539832) Clostridium clariflavum DSM 19732 11560666 YP_005048287.1 CDS Clocl_3923 NC_016627.1 4539859 4540620 R PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit complement(4539859..4540620) Clostridium clariflavum DSM 19732 11560667 YP_005048288.1 CDS Clocl_3924 NC_016627.1 4540672 4541385 R PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(4540672..4541385) Clostridium clariflavum DSM 19732 11560668 YP_005048289.1 CDS Clocl_3925 NC_016627.1 4541503 4542135 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase subunit hisH complement(4541503..4542135) Clostridium clariflavum DSM 19732 11560669 YP_005048290.1 CDS Clocl_3926 NC_016627.1 4542258 4543142 R PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(4542258..4543142) Clostridium clariflavum DSM 19732 11560670 YP_005048291.1 CDS Clocl_3927 NC_016627.1 4543284 4543871 R PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(4543284..4543871) Clostridium clariflavum DSM 19732 11560671 YP_005048292.1 CDS Clocl_3928 NC_016627.1 4544017 4545090 R PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(4544017..4545090) Clostridium clariflavum DSM 19732 11560672 YP_005048293.1 CDS Clocl_3929 NC_016627.1 4545220 4546512 R PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase complement(4545220..4546512) Clostridium clariflavum DSM 19732 11560673 YP_005048294.1 CDS Clocl_3930 NC_016627.1 4546519 4547160 R PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit complement(4546519..4547160) Clostridium clariflavum DSM 19732 11560674 YP_005048295.1 CDS Clocl_3931 NC_016627.1 4547164 4548420 R PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; histidyl-tRNA synthetase; ATP phosphoribosyltransferase regulatory subunit complement(4547164..4548420) Clostridium clariflavum DSM 19732 11560675 YP_005048296.1 CDS Clocl_3932 NC_016627.1 4548662 4550356 R PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; endoglucanase complement(4548662..4550356) Clostridium clariflavum DSM 19732 11560676 YP_005048297.1 CDS Clocl_3933 NC_016627.1 4550651 4552126 R hypothetical protein complement(4550651..4552126) Clostridium clariflavum DSM 19732 11560677 YP_005048298.1 CDS Clocl_3934 NC_016627.1 4552196 4553173 R hypothetical protein complement(4552196..4553173) Clostridium clariflavum DSM 19732 11560678 YP_005048299.1 CDS Clocl_3935 NC_016627.1 4553657 4555207 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase complement(4553657..4555207) Clostridium clariflavum DSM 19732 11560679 YP_005048300.1 CDS Clocl_3936 NC_016627.1 4555358 4555603 R hypothetical protein complement(4555358..4555603) Clostridium clariflavum DSM 19732 11560680 YP_005048301.1 CDS Clocl_3937 NC_016627.1 4555600 4556205 R PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator complement(4555600..4556205) Clostridium clariflavum DSM 19732 11560681 YP_005048302.1 CDS Clocl_3938 NC_016627.1 4556449 4557327 D PFAM: VIT family; Rubrerythrin; hypothetical protein 4556449..4557327 Clostridium clariflavum DSM 19732 11560682 YP_005048303.1 CDS Clocl_3939 NC_016627.1 4557538 4559727 R PFAM: S-layer homology domain; putative S-layer protein complement(4557538..4559727) Clostridium clariflavum DSM 19732 11560683 YP_005048304.1 CDS Clocl_3940 NC_016627.1 4559905 4562124 R PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA; ATP-dependent DNA helicase PcrA complement(4559905..4562124) Clostridium clariflavum DSM 19732 11560684 YP_005048305.1 CDS Clocl_3941 NC_016627.1 4562252 4562782 R PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein complement(4562252..4562782) Clostridium clariflavum DSM 19732 11560685 YP_005048306.1 CDS Clocl_3942 NC_016627.1 4563775 4564116 R PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII complement(4563775..4564116) Clostridium clariflavum DSM 19732 11560686 YP_005048307.1 CDS Clocl_3943 NC_016627.1 4564103 4565446 R PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; ammonium transporter (TC 1.A.11) complement(4564103..4565446) Clostridium clariflavum DSM 19732 11560687 YP_005048308.1 CDS Clocl_3944 NC_016627.1 4565702 4566277 R PFAM: Response regulator receiver domain; ANTAR domain; response regulator with putative antiterminator output domain complement(4565702..4566277) Clostridium clariflavum DSM 19732 11560688 YP_005048309.1 CDS Clocl_3945 NC_016627.1 4566407 4567741 R PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase, type I complement(4566407..4567741) Clostridium clariflavum DSM 19732 11560689 YP_005048310.1 CDS Clocl_3946 NC_016627.1 4568499 4569776 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(4568499..4569776) Clostridium clariflavum DSM 19732 11560690 YP_005048311.1 CDS Clocl_3947 NC_016627.1 4570210 4571730 R PFAM: DNA methylase; adenine specific DNA methylase Mod complement(4570210..4571730) Clostridium clariflavum DSM 19732 11560691 YP_005048312.1 CDS Clocl_3948 NC_016627.1 4571833 4572660 R hypothetical protein complement(4571833..4572660) Clostridium clariflavum DSM 19732 11560692 YP_005048313.1 CDS Clocl_3949 NC_016627.1 4572756 4573682 R PFAM: CAAX amino terminal protease family; putative metal-dependent membrane protease complement(4572756..4573682) Clostridium clariflavum DSM 19732 11560693 YP_005048314.1 CDS Clocl_3950 NC_016627.1 4573707 4574381 R PFAM: Helix-turn-helix; Peptidase S24-like; putative transcriptional regulator with C-terminal CBS domains complement(4573707..4574381) Clostridium clariflavum DSM 19732 11560694 YP_005048315.1 CDS Clocl_3951 NC_016627.1 4574659 4576401 R PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein complement(4574659..4576401) Clostridium clariflavum DSM 19732 11560695 YP_005048316.1 CDS Clocl_3952 NC_016627.1 4577219 4578409 D PFAM: PAS fold; PAS domain-containing protein 4577219..4578409 Clostridium clariflavum DSM 19732 11560696 YP_005048317.1 CDS Clocl_3953 NC_016627.1 4578499 4582854 R PFAM: Cellulose binding domain; Polysaccharide deacetylase; manually curated; putative xylanase/chitin deacetylase complement(4578499..4582854) Clostridium clariflavum DSM 19732 11560697 YP_005048318.1 CDS Clocl_3954 NC_016627.1 4583762 4585759 R PFAM: Protein of unknown function (DUF1565); hypothetical protein complement(4583762..4585759) Clostridium clariflavum DSM 19732 11560698 YP_005048319.1 CDS Clocl_3955 NC_016627.1 4586715 4587707 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; nucleoside-diphosphate-sugar epimerase 4586715..4587707 Clostridium clariflavum DSM 19732 11560699 YP_005048320.1 CDS Clocl_3956 NC_016627.1 4587737 4588444 D PFAM: Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 4587737..4588444 Clostridium clariflavum DSM 19732 11560700 YP_005048321.1 CDS Clocl_3957 NC_016627.1 4588437 4589348 D PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 4588437..4589348 Clostridium clariflavum DSM 19732 11560701 YP_005048322.1 CDS Clocl_3958 NC_016627.1 4589441 4590811 R hypothetical protein complement(4589441..4590811) Clostridium clariflavum DSM 19732 11560702 YP_005048323.1 CDS Clocl_3959 NC_016627.1 4590818 4592242 R PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF3492); glycosyltransferase complement(4590818..4592242) Clostridium clariflavum DSM 19732 11560703 YP_005048324.1 CDS Clocl_3960 NC_016627.1 4592239 4593159 R hypothetical protein complement(4592239..4593159) Clostridium clariflavum DSM 19732 11560704 YP_005048325.1 CDS Clocl_3961 NC_016627.1 4593196 4594941 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(4593196..4594941) Clostridium clariflavum DSM 19732 11560705 YP_005048326.1 CDS Clocl_3962 NC_016627.1 4595244 4596236 R hypothetical protein complement(4595244..4596236) Clostridium clariflavum DSM 19732 11560706 YP_005048327.1 CDS Clocl_3963 NC_016627.1 4596229 4597566 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM additional 4Fe4S-binding domain protein complement(4596229..4597566) Clostridium clariflavum DSM 19732 11560707 YP_005048328.1 CDS Clocl_3964 NC_016627.1 4597563 4599263 R hypothetical protein complement(4597563..4599263) Clostridium clariflavum DSM 19732 11560708 YP_005048329.1 CDS Clocl_3967 NC_016627.1 4599885 4601252 R hypothetical protein complement(4599885..4601252) Clostridium clariflavum DSM 19732 11560711 YP_005048330.1 CDS Clocl_3968 NC_016627.1 4601939 4603780 R PFAM: Serpin (serine protease inhibitor); Dockerin type I repeat; serine protease inhibitor complement(4601939..4603780) Clostridium clariflavum DSM 19732 11560712 YP_005048331.1 CDS Clocl_3969 NC_016627.1 4603985 4605628 R PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase complement(4603985..4605628) Clostridium clariflavum DSM 19732 11560713 YP_005048332.1 CDS Clocl_3970 NC_016627.1 4605779 4608427 R PFAM: Protein of unknown function (DUF901); Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain; small GTP-binding protein domain protein complement(4605779..4608427) Clostridium clariflavum DSM 19732 11560714 YP_005048333.1 CDS Clocl_3971 NC_016627.1 4608974 4609495 R PFAM: Macro domain; putative phosphatase, C-terminal domain of histone macro H2A1 like protein complement(4608974..4609495) Clostridium clariflavum DSM 19732 11560715 YP_005048334.1 CDS Clocl_3972 NC_016627.1 4609721 4609909 D hypothetical protein 4609721..4609909 Clostridium clariflavum DSM 19732 11560716 YP_005048335.1 CDS Clocl_3973 NC_016627.1 4609911 4610528 D PFAM: Fic/DOC family; protein involved in cell division 4609911..4610528 Clostridium clariflavum DSM 19732 11560717 YP_005048336.1 CDS Clocl_3974 NC_016627.1 4610875 4611300 R hypothetical protein complement(4610875..4611300) Clostridium clariflavum DSM 19732 11560718 YP_005048337.1 CDS Clocl_3977 NC_016627.1 4611911 4612555 R PFAM: Bacterial regulatory proteins, luxR family; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor; RNA polymerase sigma-30 subunit SigH complement(4611911..4612555) Clostridium clariflavum DSM 19732 11560721 YP_005048338.1 CDS Clocl_3978 NC_016627.1 4613147 4613974 R PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; rRNA methylase, putative, group 3 complement(4613147..4613974) Clostridium clariflavum DSM 19732 11560722 YP_005048339.1 CDS Clocl_3979 NC_016627.1 4614100 4614522 R PFAM: RNase3 domain; hypothetical protein complement(4614100..4614522) Clostridium clariflavum DSM 19732 11560723 YP_005048340.1 CDS Clocl_3980 NC_016627.1 4614602 4616005 R PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase complement(4614602..4616005) Clostridium clariflavum DSM 19732 11560724 YP_005048341.1 CDS Clocl_3981 NC_016627.1 4615992 4616729 R PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase complement(4615992..4616729) Clostridium clariflavum DSM 19732 11560725 YP_005048342.1 CDS Clocl_3982 NC_016627.1 4617429 4617791 D PFAM: Membrane protein of unknown function; hypothetical protein 4617429..4617791 Clostridium clariflavum DSM 19732 11560726 YP_005048343.1 CDS Clocl_3983 NC_016627.1 4618453 4619379 R PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg); 3-methyladenine DNA glycosylase complement(4618453..4619379) Clostridium clariflavum DSM 19732 11560727 YP_005048344.1 CDS Clocl_3984 NC_016627.1 4619482 4620258 D hypothetical protein 4619482..4620258 Clostridium clariflavum DSM 19732 11560729 YP_005048345.1 CDS Clocl_3985 NC_016627.1 4620307 4621146 R PFAM: Protein of unknown function (DUF322); hypothetical protein complement(4620307..4621146) Clostridium clariflavum DSM 19732 11560731 YP_005048346.1 CDS Clocl_3986 NC_016627.1 4622023 4622928 R PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC; putative sporulation protein YtxC complement(4622023..4622928) Clostridium clariflavum DSM 19732 11560732 YP_005048347.1 CDS Clocl_3987 NC_016627.1 4623137 4623889 R hypothetical protein complement(4623137..4623889) Clostridium clariflavum DSM 19732 11560733 YP_005048348.1 CDS Clocl_3988 NC_016627.1 4624489 4624632 D hypothetical protein 4624489..4624632 Clostridium clariflavum DSM 19732 11560734 YP_005048349.1 CDS Clocl_3989 NC_016627.1 4624707 4625900 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 4624707..4625900 Clostridium clariflavum DSM 19732 11560735 YP_005048350.1 CDS Clocl_3990 NC_016627.1 4626331 4626552 D PFAM: Domain of unknown function (DUF378); hypothetical protein 4626331..4626552 Clostridium clariflavum DSM 19732 11560736 YP_005048351.1 CDS Clocl_3991 NC_016627.1 4626652 4626792 R hypothetical protein complement(4626652..4626792) Clostridium clariflavum DSM 19732 11560737 YP_005048352.1 CDS Clocl_3992 NC_016627.1 4627001 4627177 D PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 4627001..4627177 Clostridium clariflavum DSM 19732 11560738 YP_005048353.1 CDS Clocl_3993 NC_016627.1 4627325 4627516 D hypothetical protein 4627325..4627516 Clostridium clariflavum DSM 19732 11560739 YP_005048354.1 CDS Clocl_3994 NC_016627.1 4627749 4628477 R PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; DNA-binding regulatory protein, YebC/PmpR family complement(4627749..4628477) Clostridium clariflavum DSM 19732 11560740 YP_005048355.1 CDS Clocl_3995 NC_016627.1 4628720 4629910 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 4628720..4629910 Clostridium clariflavum DSM 19732 11560741 YP_005048356.1 CDS Clocl_3996 NC_016627.1 4630142 4630516 R PFAM: CoA binding domain; putative CoA-binding protein complement(4630142..4630516) Clostridium clariflavum DSM 19732 11560742 YP_005048357.1 CDS Clocl_3997 NC_016627.1 4630534 4631247 R PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein complement(4630534..4631247) Clostridium clariflavum DSM 19732 11560743 YP_005048358.1 CDS Clocl_3998 NC_016627.1 4631356 4631928 D PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 4631356..4631928 Clostridium clariflavum DSM 19732 11560744 YP_005048359.1 CDS Clocl_3999 NC_016627.1 4632183 4632602 R hypothetical protein complement(4632183..4632602) Clostridium clariflavum DSM 19732 11560745 YP_005048360.1 CDS Clocl_4000 NC_016627.1 4632763 4634589 R PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; GTP-binding protein HflX complement(4632763..4634589) Clostridium clariflavum DSM 19732 11560746 YP_005048361.1 CDS Clocl_4001 NC_016627.1 4634766 4635002 R hypothetical protein complement(4634766..4635002) Clostridium clariflavum DSM 19732 11560747 YP_005048362.1 CDS Clocl_4002 NC_016627.1 4636010 4636507 R PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); dUTPase complement(4636010..4636507) Clostridium clariflavum DSM 19732 11560748 YP_005048363.1 CDS Clocl_4003 NC_016627.1 4636579 4639086 R PFAM: Collagenase; Peptidase family U32; manually curated; collagenase-like protease complement(4636579..4639086) Clostridium clariflavum DSM 19732 11560749 YP_005048364.1 CDS Clocl_4004 NC_016627.1 4639165 4640076 R PFAM: Metalloenzyme superfamily; putative phosphoglycerate mutase, AP superfamily complement(4639165..4640076) Clostridium clariflavum DSM 19732 11560750 YP_005048365.1 CDS Clocl_4005 NC_016627.1 4640446 4640874 R PFAM: Cell division protein ZapA; hypothetical protein complement(4640446..4640874) Clostridium clariflavum DSM 19732 11560751 YP_005048366.1 CDS Clocl_4006 NC_016627.1 4641253 4642643 D PFAM: Transposase DDE domain; manually curated; transposase family protein join(4641253..4642053,4642053..4642643) Clostridium clariflavum DSM 19732 11560752 YP_005048367.1 CDS Clocl_4007 NC_016627.1 4642715 4644901 R PFAM: Glycosyl hydrolase family 48; Dockerin type I repeat; dockerin-like protein complement(4642715..4644901) Clostridium clariflavum DSM 19732 11560753 YP_005048368.1 CDS Clocl_4008 NC_016627.1 4645673 4647115 R PFAM: Cellulose binding domain; Cellulose binding domain-containing protein complement(4645673..4647115) Clostridium clariflavum DSM 19732 11560754 YP_005048369.1 CDS Clocl_4009 NC_016627.1 4647108 4647872 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor complement(4647108..4647872) Clostridium clariflavum DSM 19732 11560755 YP_005048370.1 CDS Clocl_4010 NC_016627.1 4648279 4648479 D PFAM: PspC domain; putative stress-responsive transcriptional regulator 4648279..4648479 Clostridium clariflavum DSM 19732 11560756 YP_005048371.1 CDS Clocl_4011 NC_016627.1 4648723 4649448 R hypothetical protein complement(4648723..4649448) Clostridium clariflavum DSM 19732 11560757 YP_005048372.1 CDS Clocl_4012 NC_016627.1 4649607 4650947 R PFAM: Dockerin type I repeat; Glycosyl hydrolase family 53; arabinogalactan endo-1,4-beta-galactosidase complement(4649607..4650947) Clostridium clariflavum DSM 19732 11560758 YP_005048373.1 CDS Clocl_4013 NC_016627.1 4651097 4651804 R PFAM: Uncharacterised protein family UPF0005; FtsH-interacting integral membrane protein complement(4651097..4651804) Clostridium clariflavum DSM 19732 11560759 YP_005048374.1 CDS Clocl_4014 NC_016627.1 4652083 4652487 R PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; hemerythrin-like metal-binding domain-containing protein complement(4652083..4652487) Clostridium clariflavum DSM 19732 11560760 YP_005048375.1 CDS Clocl_4015 NC_016627.1 4652645 4654108 R manually curated; hypothetical protein complement(4652645..4654108) Clostridium clariflavum DSM 19732 11560761 YP_005048376.1 CDS Clocl_4016 NC_016627.1 4654305 4655159 R PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase complement(4654305..4655159) Clostridium clariflavum DSM 19732 11560762 YP_005048377.1 CDS Clocl_4017 NC_016627.1 4655431 4656489 R PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain; hypothetical protein complement(4655431..4656489) Clostridium clariflavum DSM 19732 11560763 YP_005048378.1 CDS Clocl_4018 NC_016627.1 4656726 4656947 R hypothetical protein complement(4656726..4656947) Clostridium clariflavum DSM 19732 11560764 YP_005048379.1 CDS Clocl_4019 NC_016627.1 4657117 4657881 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase complement(4657117..4657881) Clostridium clariflavum DSM 19732 11560765 YP_005048380.1 CDS Clocl_4020 NC_016627.1 4657933 4659897 R PFAM: tRNA synthetases class I (M); Anticodon-binding domain; Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; protein containing C-terminal region/beta chain of methionyl-tRNA synthetase complement(4657933..4659897) Clostridium clariflavum DSM 19732 11560766 YP_005048381.1 CDS Clocl_4021 NC_016627.1 4660039 4660572 R hypothetical protein complement(4660039..4660572) Clostridium clariflavum DSM 19732 11560767 YP_005048382.1 CDS Clocl_4022 NC_016627.1 4660576 4661142 R PFAM: Nucleoside recognition; putative membrane protein required for spore maturation complement(4660576..4661142) Clostridium clariflavum DSM 19732 11560768 YP_005048383.1 CDS Clocl_4023 NC_016627.1 4661689 4661931 D PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; looped-hinge helix DNA binding domain, AbrB family 4661689..4661931 Clostridium clariflavum DSM 19732 11560769 YP_005048384.1 CDS Clocl_4024 NC_016627.1 4662114 4662971 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; putative S-adenosylmethionine-dependent methyltransferase, YraL family complement(4662114..4662971) Clostridium clariflavum DSM 19732 11560770 YP_005048385.1 CDS Clocl_4025 NC_016627.1 4663001 4663750 R PFAM: Methyltransferase small domain; putative O-methyltransferase complement(4663001..4663750) Clostridium clariflavum DSM 19732 11560771 YP_005048386.1 CDS Clocl_4026 NC_016627.1 4663854 4664024 R PFAM: 4Fe-4S binding domain; 4Fe-4S binding protein complement(4663854..4664024) Clostridium clariflavum DSM 19732 11560772 YP_005048387.1 CDS Clocl_4027 NC_016627.1 4664324 4665199 R PFAM: PSP1 C-terminal conserved region; manually curated; putative PSP1-like protein complement(4664324..4665199) Clostridium clariflavum DSM 19732 11560773 YP_005048388.1 CDS Clocl_4028 NC_016627.1 4665204 4666199 R PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau; DNA polymerase III, delta'' subunit complement(4665204..4666199) Clostridium clariflavum DSM 19732 11560774 YP_005048389.1 CDS Clocl_4029 NC_016627.1 4666208 4666660 R PFAM: Protein of unknown function (DUF327); hypothetical protein complement(4666208..4666660) Clostridium clariflavum DSM 19732 11560775 YP_005048390.1 CDS Clocl_4030 NC_016627.1 4666657 4667289 R PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase complement(4666657..4667289) Clostridium clariflavum DSM 19732 11560776 YP_005048391.1 CDS Clocl_4031 NC_016627.1 4667374 4668846 R PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase complement(4667374..4668846) Clostridium clariflavum DSM 19732 11560777 YP_005048392.1 CDS Clocl_4032 NC_016627.1 4668828 4669010 R hypothetical protein complement(4668828..4669010) Clostridium clariflavum DSM 19732 11560778 YP_005048393.1 CDS Clocl_4033 NC_016627.1 4669134 4670039 R PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; Fe-S protein complement(4669134..4670039) Clostridium clariflavum DSM 19732 11560779 YP_005048394.1 CDS Clocl_4034 NC_016627.1 4670348 4671532 R PFAM: Dockerin type I repeat; Putative esterase; enterochelin esterase-like enzyme complement(4670348..4671532) Clostridium clariflavum DSM 19732 11560780 YP_005048395.1 CDS Clocl_4035 NC_016627.1 4672030 4674513 R PFAM: Copper amine oxidase N-terminal domain; Beta propeller domain; secreted protein with C-terminal beta-propeller domain complement(4672030..4674513) Clostridium clariflavum DSM 19732 11560781 YP_005048396.1 CDS Clocl_4036 NC_016627.1 4674712 4675482 R PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; pantothenate kinase complement(4674712..4675482) Clostridium clariflavum DSM 19732 11560782 YP_005048397.1 CDS Clocl_4037 NC_016627.1 4675522 4675944 R hypothetical protein complement(4675522..4675944) Clostridium clariflavum DSM 19732 11560783 YP_005048398.1 CDS Clocl_4038 NC_016627.1 4676150 4676938 R PFAM: Amidohydrolase; putative TIM-barrel fold metal-dependent hydrolase complement(4676150..4676938) Clostridium clariflavum DSM 19732 11560784 YP_005048399.1 CDS Clocl_4039 NC_016627.1 4677066 4678067 R PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin-(acetyl-CoA carboxylase) ligase complement(4677066..4678067) Clostridium clariflavum DSM 19732 11560785 YP_005048400.1 CDS Clocl_4040 NC_016627.1 4678115 4678726 R hypothetical protein complement(4678115..4678726) Clostridium clariflavum DSM 19732 11560786 YP_005048401.1 CDS Clocl_4041 NC_016627.1 4678793 4679317 R PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(4678793..4679317) Clostridium clariflavum DSM 19732 11560787 YP_005048402.1 CDS Clocl_4042 NC_016627.1 4679310 4679678 R PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase complement(4679310..4679678) Clostridium clariflavum DSM 19732 11560788 YP_005048403.1 CDS Clocl_4043 NC_016627.1 4679765 4680946 R PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; Dihydropteroate synthase complement(4679765..4680946) Clostridium clariflavum DSM 19732 11560789 YP_005048404.1 CDS Clocl_4044 NC_016627.1 4680965 4681465 R TIGRFAM: phosphoesterase, MJ0936 family; phosphoesterase complement(4680965..4681465) Clostridium clariflavum DSM 19732 11560790 YP_005048405.1 CDS Clocl_4045 NC_016627.1 4681853 4682263 D hypothetical protein 4681853..4682263 Clostridium clariflavum DSM 19732 11560791 YP_005048406.1 CDS Clocl_4046 NC_016627.1 4682292 4682861 D hypothetical protein 4682292..4682861 Clostridium clariflavum DSM 19732 11560792 YP_005048407.1 CDS Clocl_4047 NC_016627.1 4682943 4684085 R PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(4682943..4684085) Clostridium clariflavum DSM 19732 11560793 YP_005048408.1 CDS Clocl_4048 NC_016627.1 4684174 4684518 D PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator 4684174..4684518 Clostridium clariflavum DSM 19732 11560794 YP_005048409.1 CDS Clocl_4049 NC_016627.1 4684582 4685268 R hypothetical protein complement(4684582..4685268) Clostridium clariflavum DSM 19732 11560795 YP_005048410.1 CDS Clocl_4050 NC_016627.1 4685675 4687264 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; manually curated; methyl-accepting chemotaxis protein complement(4685675..4687264) Clostridium clariflavum DSM 19732 11560796 YP_005048411.1 CDS Clocl_4051 NC_016627.1 4687832 4689472 D PFAM: DHH family; DRTGG domain; DHHA2 domain; CBS domain; inorganic pyrophosphatase/exopolyphosphatase 4687832..4689472 Clostridium clariflavum DSM 19732 11560797 YP_005048412.1 CDS Clocl_4052 NC_016627.1 4689610 4690173 R PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I complement(4689610..4690173) Clostridium clariflavum DSM 19732 11560798 YP_005048413.1 CDS Clocl_4053 NC_016627.1 4690375 4691619 R PFAM: Branched-chain amino acid transport system / permease component; ABC-type xylose transport system, permease component complement(4690375..4691619) Clostridium clariflavum DSM 19732 11560799 YP_005048414.1 CDS Clocl_4054 NC_016627.1 4691585 4693147 R PFAM: ABC transporter; manually curated; sugar ABC transporter ATPase complement(4691585..4693147) Clostridium clariflavum DSM 19732 11560800 YP_005048415.1 CDS Clocl_4055 NC_016627.1 4693362 4694447 R PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family complement(4693362..4694447) Clostridium clariflavum DSM 19732 11560801 YP_005048416.1 CDS Clocl_4056 NC_016627.1 4694832 4697480 R PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase; cyanophycin synthetase complement(4694832..4697480) Clostridium clariflavum DSM 19732 11560802 YP_005048417.1 CDS Clocl_4057 NC_016627.1 4697575 4698381 R PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; cyanophycinase complement(4697575..4698381) Clostridium clariflavum DSM 19732 11560803 YP_005048418.1 CDS Clocl_4058 NC_016627.1 4698496 4698804 R hypothetical protein complement(4698496..4698804) Clostridium clariflavum DSM 19732 11560804 YP_005048419.1 CDS Clocl_4059 NC_016627.1 4698818 4699972 R PFAM: Amidohydrolase family; TIGRFAM: isoaspartyl dipeptidase IadA; isoaspartyl dipeptidase IadA complement(4698818..4699972) Clostridium clariflavum DSM 19732 11560805 YP_005048420.1 CDS Clocl_4060 NC_016627.1 4700590 4701249 D PFAM: LexA DNA binding domain; SOS response transcriptional repressor, RecA-mediated autopeptidase 4700590..4701249 Clostridium clariflavum DSM 19732 11560806 YP_005048421.1 CDS Clocl_4061 NC_016627.1 4701393 4702478 R PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(4701393..4702478) Clostridium clariflavum DSM 19732 11560807 YP_005048422.1 CDS Clocl_4062 NC_016627.1 4702657 4703571 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein complement(4702657..4703571) Clostridium clariflavum DSM 19732 11560808 YP_005048423.1 CDS Clocl_4063 NC_016627.1 4704044 4704658 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated; sigma-70 family RNA polymerase sigma factor 4704044..4704658 Clostridium clariflavum DSM 19732 11560809 YP_005048424.1 CDS Clocl_4064 NC_016627.1 4704621 4705370 D hypothetical protein 4704621..4705370 Clostridium clariflavum DSM 19732 11560810 YP_005048425.1 CDS Clocl_4065 NC_016627.1 4705441 4705950 R hypothetical protein complement(4705441..4705950) Clostridium clariflavum DSM 19732 11560811 YP_005048426.1 CDS Clocl_4066 NC_016627.1 4706572 4708653 D PFAM: Thiamine pyrophosphate enzyme, central domain; GAF domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-dependent protein 4706572..4708653 Clostridium clariflavum DSM 19732 11560812 YP_005048427.1 CDS Clocl_4067 NC_016627.1 4708916 4709305 D hypothetical protein 4708916..4709305 Clostridium clariflavum DSM 19732 11560813 YP_005048428.1 CDS Clocl_4068 NC_016627.1 4709383 4710012 R PFAM: Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein complement(4709383..4710012) Clostridium clariflavum DSM 19732 11560814 YP_005048429.1 CDS Clocl_4069 NC_016627.1 4710359 4711309 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase family protein 4710359..4711309 Clostridium clariflavum DSM 19732 11560815 YP_005048430.1 CDS Clocl_4071 NC_016627.1 4712015 4713514 D hypothetical protein 4712015..4713514 Clostridium clariflavum DSM 19732 11560817 YP_005048431.1 CDS Clocl_4073 NC_016627.1 4714824 4715315 R PFAM: FlgN protein; FlgN protein complement(4714824..4715315) Clostridium clariflavum DSM 19732 11560818 YP_005048432.1 CDS Clocl_4074 NC_016627.1 4715327 4715731 R PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthetic protein FliS complement(4715327..4715731) Clostridium clariflavum DSM 19732 11560819 YP_005048433.1 CDS Clocl_4075 NC_016627.1 4715868 4717769 R PFAM: Flagellar hook-associated protein 2 C-terminus; manually curated; flagellar capping protein complement(4715868..4717769) Clostridium clariflavum DSM 19732 11560820 YP_005048434.1 CDS Clocl_4076 NC_016627.1 4717775 4718173 R PFAM: FlaG protein; flagellar protein FlaG complement(4717775..4718173) Clostridium clariflavum DSM 19732 11560821 YP_005048435.1 CDS Clocl_4077 NC_016627.1 4718248 4719192 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(4718248..4719192) Clostridium clariflavum DSM 19732 11560822 YP_005048436.1 CDS Clocl_4078 NC_016627.1 4719266 4720429 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase complement(4719266..4720429) Clostridium clariflavum DSM 19732 11560823 YP_005048437.1 CDS Clocl_4079 NC_016627.1 4720562 4721626 R PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; pseudaminic acid biosynthesis-associated protein PseG complement(4720562..4721626) Clostridium clariflavum DSM 19732 11560824 YP_005048438.1 CDS Clocl_4080 NC_016627.1 4721636 4722319 R PFAM: GlcNAc-PI de-N-acetylase; putative LmbE-like protein complement(4721636..4722319) Clostridium clariflavum DSM 19732 11560825 YP_005048439.1 CDS Clocl_4081 NC_016627.1 4722312 4723037 R PFAM: Formyl transferase; methionyl-tRNA formyltransferase complement(4722312..4723037) Clostridium clariflavum DSM 19732 11560826 YP_005048440.1 CDS Clocl_4082 NC_016627.1 4723019 4724065 R PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase; N-acetylneuraminate synthase complement(4723019..4724065) Clostridium clariflavum DSM 19732 11560827 YP_005048441.1 CDS Clocl_4083 NC_016627.1 4724081 4725736 R PFAM: NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC; subfamily IIIC HAD-superfamily phosphatase complement(4724081..4725736) Clostridium clariflavum DSM 19732 11560828 YP_005048442.1 CDS Clocl_4084 NC_016627.1 4725790 4726005 R PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein complement(4725790..4726005) Clostridium clariflavum DSM 19732 11560829 YP_005048443.1 CDS Clocl_4085 NC_016627.1 4726009 4726689 R TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; pseudaminic acid biosynthesis N-acetyl transferase complement(4726009..4726689) Clostridium clariflavum DSM 19732 11560830 YP_005048444.1 CDS Clocl_4086 NC_016627.1 4726658 4727368 R PFAM: Cytidylyltransferase; manually curated; spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase complement(4726658..4727368) Clostridium clariflavum DSM 19732 11560831 YP_005048445.1 CDS Clocl_4087 NC_016627.1 4727454 4728098 R PFAM: Methyltransferase domain; TIGRFAM: pseudaminic acid biosynthesis-associated methylase; pseudaminic acid biosynthesis-associated methylase complement(4727454..4728098) Clostridium clariflavum DSM 19732 11560832 YP_005048446.1 CDS Clocl_4088 NC_016627.1 4728136 4729134 R PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase complement(4728136..4729134) Clostridium clariflavum DSM 19732 11560833 YP_005048447.1 CDS Clocl_4089 NC_016627.1 4729121 4730536 R PFAM: Protein of unknown function DUF115; hypothetical protein complement(4729121..4730536) Clostridium clariflavum DSM 19732 11560834 YP_005048448.1 CDS Clocl_4090 NC_016627.1 4730536 4730901 R hypothetical protein complement(4730536..4730901) Clostridium clariflavum DSM 19732 11560835 YP_005048449.1 CDS Clocl_4091 NC_016627.1 4730914 4732788 R PFAM: Protein of unknown function DUF115; hypothetical protein complement(4730914..4732788) Clostridium clariflavum DSM 19732 11560836 YP_005048450.1 CDS Clocl_4092 NC_016627.1 4732975 4733787 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein complement(4732975..4733787) Clostridium clariflavum DSM 19732 11560837 YP_005048451.1 CDS Clocl_4093 NC_016627.1 4733828 4734646 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein complement(4733828..4734646) Clostridium clariflavum DSM 19732 11560838 YP_005048452.1 CDS Clocl_4094 NC_016627.1 4734687 4735505 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein complement(4734687..4735505) Clostridium clariflavum DSM 19732 11560839 YP_005048453.1 CDS Clocl_4095 NC_016627.1 4735732 4735947 R PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA complement(4735732..4735947) Clostridium clariflavum DSM 19732 11560840 YP_005048454.1 CDS Clocl_4096 NC_016627.1 4735919 4736398 R PFAM: FliW protein; hypothetical protein complement(4735919..4736398) Clostridium clariflavum DSM 19732 11560841 YP_005048455.1 CDS Clocl_4097 NC_016627.1 4736434 4737015 R hypothetical protein complement(4736434..4737015) Clostridium clariflavum DSM 19732 11560842 YP_005048456.1 CDS Clocl_4098 NC_016627.1 4737054 4737962 R PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein 3 complement(4737054..4737962) Clostridium clariflavum DSM 19732 11560843 YP_005048457.1 CDS Clocl_4099 NC_016627.1 4737995 4739599 R PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK complement(4737995..4739599) Clostridium clariflavum DSM 19732 11560844 YP_005048458.1 CDS Clocl_4100 NC_016627.1 4739606 4741651 R PFAM: von Willebrand factor type A domain; Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK complement(4739606..4741651) Clostridium clariflavum DSM 19732 11560845 YP_005048459.1 CDS Clocl_4101 NC_016627.1 4741707 4742213 R PFAM: FlgN protein; FlgN protein complement(4741707..4742213) Clostridium clariflavum DSM 19732 11560846 YP_005048460.1 CDS Clocl_4102 NC_016627.1 4742294 4742581 R PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; flagellar biosynthesis anti-sigma factor FlgM complement(4742294..4742581) Clostridium clariflavum DSM 19732 11560847 YP_005048461.1 CDS Clocl_4103 NC_016627.1 4742818 4743240 R TIGRFAM: flagellar operon protein TIGR03826; hypothetical protein complement(4742818..4743240) Clostridium clariflavum DSM 19732 11560848 YP_005048462.1 CDS Clocl_4104 NC_016627.1 4743311 4743976 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; putative amidophosphoribosyltransferase complement(4743311..4743976) Clostridium clariflavum DSM 19732 11560849 YP_005048463.1 CDS Clocl_4105 NC_016627.1 4744042 4744872 R PFAM: Mechanosensitive ion channel; small-conductance mechanosensitive channel complement(4744042..4744872) Clostridium clariflavum DSM 19732 11560850 YP_005048464.1 CDS Clocl_4106 NC_016627.1 4745216 4745338 R hypothetical protein complement(4745216..4745338) Clostridium clariflavum DSM 19732 11560851 YP_005048465.1 CDS Clocl_4107 NC_016627.1 4745421 4746287 R hypothetical protein complement(4745421..4746287) Clostridium clariflavum DSM 19732 11560852 YP_005048466.1 CDS Clocl_4108 NC_016627.1 4746382 4747107 R PFAM: Peptidase C26; putative glutamine amidotransferase complement(4746382..4747107) Clostridium clariflavum DSM 19732 11560853 YP_005048467.1 CDS Clocl_4109 NC_016627.1 4747241 4747576 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor complement(4747241..4747576) Clostridium clariflavum DSM 19732 11560854 YP_005048468.1 CDS Clocl_4110 NC_016627.1 4747960 4748100 D hypothetical protein 4747960..4748100 Clostridium clariflavum DSM 19732 11560855 YP_005048469.1 CDS Clocl_4111 NC_016627.1 4748212 4748370 R PFAM: Rubredoxin; rubredoxin complement(4748212..4748370) Clostridium clariflavum DSM 19732 11560856 YP_005048470.1 CDS Clocl_4112 NC_016627.1 4748860 4749315 R PFAM: Transposase IS200 like; transposase complement(4748860..4749315) Clostridium clariflavum DSM 19732 11560857 YP_005048471.1 CDS Clocl_4113 NC_016627.1 4749524 4750129 R PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC; putative sporulation protein YyaC complement(4749524..4750129) Clostridium clariflavum DSM 19732 11560858 YP_005048472.1 CDS Clocl_4114 NC_016627.1 4750366 4751460 D PFAM: Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box; manually curated; PAS domain S-box 4750366..4751460 Clostridium clariflavum DSM 19732 11560859 YP_005048473.1 CDS Clocl_4115 NC_016627.1 4752462 4753568 D manually curated; hypothetical protein 4752462..4753568 Clostridium clariflavum DSM 19732 11560860 YP_005048474.1 CDS Clocl_4116 NC_016627.1 4753705 4753914 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31P complement(4753705..4753914) Clostridium clariflavum DSM 19732 11560861 YP_005048475.1 CDS Clocl_4117 NC_016627.1 4754046 4755983 R PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; manually curated; transcription termination factor Rho complement(4754046..4755983) Clostridium clariflavum DSM 19732 11560862 YP_005048476.1 CDS Clocl_4118 NC_016627.1 4756433 4757092 R hypothetical protein complement(4756433..4757092) Clostridium clariflavum DSM 19732 11560863 YP_005048477.1 CDS Clocl_4121 NC_016627.1 4758030 4758812 R PFAM: ABC transporter; ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component complement(4758030..4758812) Clostridium clariflavum DSM 19732 11560866 YP_005048478.1 CDS Clocl_4122 NC_016627.1 4758820 4759833 R PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease complement(4758820..4759833) Clostridium clariflavum DSM 19732 11560867 YP_005048479.1 CDS Clocl_4123 NC_016627.1 4759850 4760812 R PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein complement(4759850..4760812) Clostridium clariflavum DSM 19732 11560868 YP_005048480.1 CDS Clocl_4124 NC_016627.1 4761582 4763525 D PFAM: Dockerin type I repeat; CotH protein; manually curated; dockerin-like protein 4761582..4763525 Clostridium clariflavum DSM 19732 11560869 YP_005048481.1 CDS Clocl_4126 NC_016627.1 4764143 4764856 D PFAM: PP-loop family; putative ATPase of the PP-loop superfamily implicated in cell cycle control 4764143..4764856 Clostridium clariflavum DSM 19732 11560871 YP_005048482.1 CDS Clocl_4127 NC_016627.1 4764931 4767777 D PFAM: Predicted periplasmic protein (DUF2233); hypothetical protein 4764931..4767777 Clostridium clariflavum DSM 19732 11560872 YP_005048483.1 CDS Clocl_4128 NC_016627.1 4768490 4769035 R hypothetical protein complement(4768490..4769035) Clostridium clariflavum DSM 19732 11560874 YP_005048484.1 CDS Clocl_4129 NC_016627.1 4769017 4769268 R hypothetical protein complement(4769017..4769268) Clostridium clariflavum DSM 19732 11560876 YP_005048485.1 CDS Clocl_4130 NC_016627.1 4769491 4770363 R PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase complement(4769491..4770363) Clostridium clariflavum DSM 19732 11560877 YP_005048486.1 CDS Clocl_4131 NC_016627.1 4770733 4771602 D PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); hypothetical protein 4770733..4771602 Clostridium clariflavum DSM 19732 11560878 YP_005048487.1 CDS Clocl_4132 NC_016627.1 4771692 4771979 R PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(4771692..4771979) Clostridium clariflavum DSM 19732 11560879 YP_005048488.1 CDS Clocl_4133 NC_016627.1 4772041 4772451 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single stranded DNA-binding protein complement(4772041..4772451) Clostridium clariflavum DSM 19732 11560880 YP_005048489.1 CDS Clocl_4134 NC_016627.1 4772461 4772748 R PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 complement(4772461..4772748) Clostridium clariflavum DSM 19732 11560882 YP_005048490.1 CDS Clocl_4135 NC_016627.1 4773216 4774478 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 4773216..4774478 Clostridium clariflavum DSM 19732 11560883 YP_005048491.1 CDS Clocl_4136 NC_016627.1 4774657 4775859 R manually curated; hypothetical protein complement(4774657..4775859) Clostridium clariflavum DSM 19732 11560884 YP_005048492.1 CDS Clocl_4137 NC_016627.1 4775864 4776568 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor complement(4775864..4776568) Clostridium clariflavum DSM 19732 11560885 YP_005048493.1 CDS Clocl_4138 NC_016627.1 4776909 4777778 D PFAM: Domain of unknown function (DUF368); hypothetical protein 4776909..4777778 Clostridium clariflavum DSM 19732 11560886 YP_005048494.1 CDS Clocl_4139 NC_016627.1 4777894 4778154 R hypothetical protein complement(4777894..4778154) Clostridium clariflavum DSM 19732 11560887 YP_005048495.1 CDS Clocl_4140 NC_016627.1 4778233 4779807 R PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; 2-isopropylmalate synthase complement(4778233..4779807) Clostridium clariflavum DSM 19732 11560888 YP_005048496.1 CDS Clocl_4141 NC_016627.1 4779890 4781413 R PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase complement(4779890..4781413) Clostridium clariflavum DSM 19732 11560889 YP_005048497.1 CDS Clocl_4142 NC_016627.1 4781606 4782601 R PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(4781606..4782601) Clostridium clariflavum DSM 19732 11560890 YP_005048498.1 CDS Clocl_4143 NC_016627.1 4782610 4783122 R PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit complement(4782610..4783122) Clostridium clariflavum DSM 19732 11560891 YP_005048499.1 CDS Clocl_4144 NC_016627.1 4783191 4784819 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase, large subunit complement(4783191..4784819) Clostridium clariflavum DSM 19732 11560892 YP_005048500.1 CDS Clocl_4145 NC_016627.1 4784969 4785184 R hypothetical protein complement(4784969..4785184) Clostridium clariflavum DSM 19732 11560893 YP_005048501.1 CDS Clocl_4146 NC_016627.1 4785327 4786760 R PFAM: Mannosyltransferase (PIG-V)); putative integral membrane protein complement(4785327..4786760) Clostridium clariflavum DSM 19732 11560894 YP_005048502.1 CDS Clocl_4147 NC_016627.1 4787011 4787484 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytosine/adenosine deaminase complement(4787011..4787484) Clostridium clariflavum DSM 19732 11560895 YP_005048503.1 CDS Clocl_4148 NC_016627.1 4787733 4788953 R PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); trypsin-like serine protease with C-terminal PDZ domain complement(4787733..4788953) Clostridium clariflavum DSM 19732 11560896 YP_005048504.1 CDS Clocl_4149 NC_016627.1 4789168 4789365 R PFAM: Bacterial protein of unknown function (DUF951); hypothetical protein complement(4789168..4789365) Clostridium clariflavum DSM 19732 11560897 YP_005048505.1 CDS Clocl_4150 NC_016627.1 4789576 4790847 D PFAM: Putative peptidoglycan binding domain; Zinc carboxypeptidase; LysM domain; gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I 4789576..4790847 Clostridium clariflavum DSM 19732 11560898 YP_005048506.1 CDS Clocl_4151 NC_016627.1 4791112 4791516 D hypothetical protein 4791112..4791516 Clostridium clariflavum DSM 19732 11560899 YP_005048507.1 CDS Clocl_4152 NC_016627.1 4791517 4791720 D PFAM: Helix-turn-helix; putative transcriptional regulator 4791517..4791720 Clostridium clariflavum DSM 19732 11560900 YP_005048508.1 CDS Clocl_4153 NC_016627.1 4791884 4793848 R PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III complement(4791884..4793848) Clostridium clariflavum DSM 19732 11560901 YP_005048509.1 CDS Clocl_4154 NC_016627.1 4794034 4794852 R PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG; sporulation peptidase YabG complement(4794034..4794852) Clostridium clariflavum DSM 19732 11560902 YP_005048510.1 CDS Clocl_4155 NC_016627.1 4795015 4797372 R PFAM: Transglutaminase-like superfamily; manually curated; transglutaminase complement(4795015..4797372) Clostridium clariflavum DSM 19732 11560903 YP_005048511.1 CDS Clocl_4156 NC_016627.1 4797408 4798658 R PFAM: Protein of unknown function DUF58; hypothetical protein complement(4797408..4798658) Clostridium clariflavum DSM 19732 11560904 YP_005048512.1 CDS Clocl_4157 NC_016627.1 4798944 4799873 R PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase complement(4798944..4799873) Clostridium clariflavum DSM 19732 11560905 YP_005048513.1 CDS Clocl_4158 NC_016627.1 4800276 4802522 R PFAM: Cellulose binding domain; Cohesin domain; manually curated; cellobiohydrolase A (1,4-beta-cellobiosidase A) complement(4800276..4802522) Clostridium clariflavum DSM 19732 11560906 YP_005048514.1 CDS Clocl_4159 NC_016627.1 4803183 4803815 R PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase complement(4803183..4803815) Clostridium clariflavum DSM 19732 11560907 YP_005048515.1 CDS Clocl_4160 NC_016627.1 4804088 4805479 D PFAM: Transposase DDE domain; transposase family protein 4804088..4805479 Clostridium clariflavum DSM 19732 11560908 YP_005048516.1 CDS Clocl_4161 NC_016627.1 4805735 4808224 R PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); CBM6-containing protein,dockerin-like protein complement(4805735..4808224) Clostridium clariflavum DSM 19732 11560909 YP_005048517.1 CDS Clocl_4162 NC_016627.1 4808747 4809445 D PFAM: RDD family; putative membrane protein/domain protein 4808747..4809445 Clostridium clariflavum DSM 19732 11560910 YP_005048518.1 CDS Clocl_4163 NC_016627.1 4809601 4810350 D PFAM: RDD family; hypothetical protein 4809601..4810350 Clostridium clariflavum DSM 19732 11560911 YP_005048519.1 CDS Clocl_4165 NC_016627.1 4811225 4811608 R hypothetical protein complement(4811225..4811608) Clostridium clariflavum DSM 19732 11560913 YP_005048520.1 CDS Clocl_4166 NC_016627.1 4811629 4812399 R PFAM: Protein of unknown function (DUF3298); valyl-tRNA synthetase complement(4811629..4812399) Clostridium clariflavum DSM 19732 11560914 YP_005048521.1 CDS Clocl_4167 NC_016627.1 4812869 4813900 D PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 4812869..4813900 Clostridium clariflavum DSM 19732 11560915 YP_005048522.1 CDS Clocl_4168 NC_016627.1 4813931 4814410 R PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; rRNA large subunit m3Psi methyltransferase RlmH complement(4813931..4814410) Clostridium clariflavum DSM 19732 11560916 YP_005048523.1 CDS Clocl_4169 NC_016627.1 4814419 4815210 R PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase, beta-lactamase superfamily I complement(4814419..4815210) Clostridium clariflavum DSM 19732 11560917 YP_005048524.1 CDS Clocl_4170 NC_016627.1 4815340 4816599 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4815340..4816599) Clostridium clariflavum DSM 19732 11560918 YP_005048525.1 CDS Clocl_4171 NC_016627.1 4816704 4817555 R PFAM: YycH protein; hypothetical protein complement(4816704..4817555) Clostridium clariflavum DSM 19732 11560919 YP_005048526.1 CDS Clocl_4172 NC_016627.1 4817558 4819018 R hypothetical protein complement(4817558..4819018) Clostridium clariflavum DSM 19732 11560920 YP_005048527.1 CDS Clocl_4173 NC_016627.1 4819045 4819587 R hypothetical protein complement(4819045..4819587) Clostridium clariflavum DSM 19732 11560922 YP_005048528.1 CDS Clocl_4174 NC_016627.1 4819693 4821516 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase complement(4819693..4821516) Clostridium clariflavum DSM 19732 11560923 YP_005048529.1 CDS Clocl_4175 NC_016627.1 4821615 4822307 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain complement(4821615..4822307) Clostridium clariflavum DSM 19732 11560924 YP_005048530.1 CDS Clocl_4176 NC_016627.1 4822612 4822830 D hypothetical protein 4822612..4822830 Clostridium clariflavum DSM 19732 11560925 YP_005048531.1 CDS Clocl_4178 NC_016627.1 4824628 4825455 R PFAM: Cytidylyltransferase; CMP-N-acetylneuraminic acid synthetase complement(4824628..4825455) Clostridium clariflavum DSM 19732 11560927 YP_005048532.1 CDS Clocl_4179 NC_016627.1 4825876 4827045 R PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; UDP-N-acetyl-D-glucosamine 2-epimerase complement(4825876..4827045) Clostridium clariflavum DSM 19732 11560928 YP_005048533.1 CDS Clocl_4180 NC_016627.1 4827042 4828037 R PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase; N-acetylneuraminate synthase complement(4827042..4828037) Clostridium clariflavum DSM 19732 11560929 YP_005048534.1 CDS Clocl_4181 NC_016627.1 4828034 4828678 R TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; hypothetical protein complement(4828034..4828678) Clostridium clariflavum DSM 19732 11560930 YP_005048535.1 CDS Clocl_4182 NC_016627.1 4828671 4829717 R PFAM: Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase family protein complement(4828671..4829717) Clostridium clariflavum DSM 19732 11560931 YP_005048536.1 CDS Clocl_4183 NC_016627.1 4829742 4830914 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis complement(4829742..4830914) Clostridium clariflavum DSM 19732 11560932 YP_005048537.1 CDS Clocl_4184 NC_016627.1 4831197 4832177 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(4831197..4832177) Clostridium clariflavum DSM 19732 11560933 YP_005048538.1 CDS Clocl_4185 NC_016627.1 4832607 4834451 R PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase complement(4832607..4834451) Clostridium clariflavum DSM 19732 11560934 YP_005048539.1 CDS Clocl_4186 NC_016627.1 4835230 4836675 R PFAM: Polysaccharide biosynthesis protein; manually curated; membrane protein involved in the export of O-antigen and teichoic acid complement(4835230..4836675) Clostridium clariflavum DSM 19732 11560935 YP_005048540.1 CDS Clocl_4187 NC_016627.1 4836677 4838053 R PFAM: Capsule polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein complement(4836677..4838053) Clostridium clariflavum DSM 19732 11560936 YP_005048541.1 CDS Clocl_4188 NC_016627.1 4838548 4839831 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase complement(4838548..4839831) Clostridium clariflavum DSM 19732 11560937 YP_005048542.1 CDS Clocl_4191 NC_016627.1 4841187 4842218 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(4841187..4842218) Clostridium clariflavum DSM 19732 11560940 YP_005048543.1 CDS Clocl_4192 NC_016627.1 4842385 4843335 R PFAM: Glycosyl transferase family 2; glycosyl transferase family protein complement(4842385..4843335) Clostridium clariflavum DSM 19732 11560941 YP_005048544.1 CDS Clocl_4193 NC_016627.1 4843366 4844685 R hypothetical protein complement(4843366..4844685) Clostridium clariflavum DSM 19732 11560942 YP_005048545.1 CDS Clocl_4194 NC_016627.1 4844688 4845500 R PFAM: Glycosyl transferase family 2; manually curated; glycosyl transferase family protein complement(4844688..4845500) Clostridium clariflavum DSM 19732 11560943 YP_005048546.1 CDS Clocl_4195 NC_016627.1 4845670 4846674 R manually curated; hypothetical protein complement(4845670..4846674) Clostridium clariflavum DSM 19732 11560944 YP_005048547.1 CDS Clocl_4196 NC_016627.1 4846671 4847801 R PFAM: NAD dependent epimerase/dehydratase family; manually curated; nucleoside-diphosphate-sugar epimerase complement(4846671..4847801) Clostridium clariflavum DSM 19732 11560945 YP_005048548.1 CDS Clocl_4197 NC_016627.1 4847813 4848640 R PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase complement(4847813..4848640) Clostridium clariflavum DSM 19732 11560946 YP_005048549.1 CDS Clocl_4198 NC_016627.1 4848637 4849278 R PFAM: Bacterial sugar transferase; glycosyl transferase complement(4848637..4849278) Clostridium clariflavum DSM 19732 11560947 YP_005048550.1 CDS Clocl_4199 NC_016627.1 4849335 4852418 R PFAM: O-Antigen ligase; manually curated; putative membrane protein, required for N-linked glycosylation complement(4849335..4852418) Clostridium clariflavum DSM 19732 11560948 YP_005048551.1 CDS Clocl_4200 NC_016627.1 4852500 4853015 R hypothetical protein complement(4852500..4853015) Clostridium clariflavum DSM 19732 11560949 YP_005048552.1 CDS Clocl_4201 NC_016627.1 4853053 4854324 R PFAM: Chain length determinant protein; exopolysaccharide biosynthesis protein complement(4853053..4854324) Clostridium clariflavum DSM 19732 11560950 YP_005048553.1 CDS Clocl_4202 NC_016627.1 4854508 4857624 R PFAM: S-layer homology domain; Bacterial Ig-like domain (group 4); Ig-like domain-containing protein,putative S-layer protein complement(4854508..4857624) Clostridium clariflavum DSM 19732 11560951 YP_005048554.1 CDS Clocl_4203 NC_016627.1 4857760 4860915 R PFAM: S-layer homology domain; Bacterial Ig-like domain (group 4); Ig-like domain-containing protein,putative S-layer protein complement(4857760..4860915) Clostridium clariflavum DSM 19732 11560952 YP_005048555.1 CDS Clocl_4204 NC_016627.1 4861418 4861594 R PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type complement(4861418..4861594) Clostridium clariflavum DSM 19732 11560953 YP_005048556.1 CDS Clocl_4205 NC_016627.1 4861793 4862236 D PFAM: Cell Wall Hydrolase; Cell Wall Hydrolase 4861793..4862236 Clostridium clariflavum DSM 19732 11560954 YP_005048557.1 CDS Clocl_4206 NC_016627.1 4862269 4862721 D hypothetical protein 4862269..4862721 Clostridium clariflavum DSM 19732 11560955 YP_005048558.1 CDS Clocl_4207 NC_016627.1 4862813 4863232 R PFAM: CBS domain; putative signal-transduction protein containing cAMP-binding and CBS domains complement(4862813..4863232) Clostridium clariflavum DSM 19732 11560956 YP_005048559.1 CDS Clocl_4208 NC_016627.1 4863603 4864745 D PFAM: PGAP1-like protein; manually curated; alpha/beta hydrolase 4863603..4864745 Clostridium clariflavum DSM 19732 11560957 YP_005048560.1 CDS Clocl_4210 NC_016627.1 4866678 4867319 R PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase complement(4866678..4867319) Clostridium clariflavum DSM 19732 11560959 YP_005048561.1 CDS Clocl_4211 NC_016627.1 4868075 4871878 R PFAM: Cellulose binding domain; Cohesin domain; manually curated; cellobiohydrolase A (1,4-beta-cellobiosidase A) complement(4868075..4871878) Clostridium clariflavum DSM 19732 11560960 YP_005048562.1 CDS Clocl_4212 NC_016627.1 4871875 4874880 R PFAM: Cellulose binding domain; Cohesin domain; cellobiohydrolase A (1,4-beta-cellobiosidase A) complement(4871875..4874880) Clostridium clariflavum DSM 19732 11560961 YP_005048563.1 CDS Clocl_4213 NC_016627.1 4875640 4876473 R PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(4875640..4876473) Clostridium clariflavum DSM 19732 11560962 YP_005048564.1 CDS Clocl_4214 NC_016627.1 4876606 4878213 R PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase complement(4876606..4878213) Clostridium clariflavum DSM 19732 11560963 YP_005048565.1 CDS Clocl_4215 NC_016627.1 4878403 4879314 R PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase complement(4878403..4879314) Clostridium clariflavum DSM 19732 11560964 YP_005048566.1 CDS Clocl_4216 NC_016627.1 4879612 4880256 R PFAM: Accessory gene regulator B; protein possibly involved in post-translational modification of quorum-sensing peptides complement(4879612..4880256) Clostridium clariflavum DSM 19732 11560965 YP_005048567.1 CDS Clocl_4221 NC_016627.1 4886988 4889513 R PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A complement(4886988..4889513) Clostridium clariflavum DSM 19732 11560970 YP_005048568.1 CDS Clocl_4222 NC_016627.1 4889806 4890639 R PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; ParB-like partition protein complement(4889806..4890639) Clostridium clariflavum DSM 19732 11560971 YP_005048569.1 CDS Clocl_4223 NC_016627.1 4890850 4891572 R PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; 16S rRNA m(7)G-527 methyltransferase complement(4890850..4891572) Clostridium clariflavum DSM 19732 11560972 YP_005048570.1 CDS Clocl_4224 NC_016627.1 4891676 4893574 R PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose-inhibited division protein A complement(4891676..4893574) Clostridium clariflavum DSM 19732 11560973 YP_005048571.1 CDS Clocl_4225 NC_016627.1 4893585 4894967 R PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; tRNA modification GTPase trmE complement(4893585..4894967) Clostridium clariflavum DSM 19732 11560974 YP_005048572.1 CDS Clocl_4226 NC_016627.1 4895160 4895780 R PFAM: R3H domain; putative RNA-binding protein complement(4895160..4895780) Clostridium clariflavum DSM 19732 11560976 YP_005048573.1 CDS Clocl_4227 NC_016627.1 4895781 4896626 R PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; manually curated; preprotein translocase subunit YidC complement(4895781..4896626) Clostridium clariflavum DSM 19732 11560978 YP_005048574.1 CDS Clocl_4228 NC_016627.1 4896669 4896884 R PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein complement(4896669..4896884) Clostridium clariflavum DSM 19732 11560980 YP_005048575.1 CDS Clocl_4229 NC_016627.1 4896886 4897230 R PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component complement(4896886..4897230) Clostridium clariflavum DSM 19732 11560981 YP_005048576.1 CDS Clocl_4230 NC_016627.1 4897346 4897495 R PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated; IMG reference gene:2507487056_SP; 50S ribosomal protein L34 complement(4897346..4897495) Clostridium clariflavum DSM 19732 11560982 Clocl_0012 tRNA Clocl_0012 NC_016627.1 13212 13302 D tRNA-Ser 13212..13302 Clostridium clariflavum DSM 19732 11562281 Clocl_0013 tRNA Clocl_0013 NC_016627.1 13341 13432 D tRNA-Ser 13341..13432 Clostridium clariflavum DSM 19732 11562282 Clocl_0059 tRNA Clocl_0059 NC_016627.1 71830 71906 D tRNA-Arg 71830..71906 Clostridium clariflavum DSM 19732 11560052 Clocl_0084 tRNA Clocl_0084 NC_016627.1 99902 99978 D tRNA-Arg 99902..99978 Clostridium clariflavum DSM 19732 11560077 Clocl_0086 tRNA Clocl_0086 NC_016627.1 100620 100710 D tRNA-Ser 100620..100710 Clostridium clariflavum DSM 19732 11560079 Clocl_0336 tRNA Clocl_0336 NC_016627.1 358739 358827 D tRNA-Leu 358739..358827 Clostridium clariflavum DSM 19732 11560329 Clocl_0337 tRNA Clocl_0337 NC_016627.1 358834 358910 D tRNA-Met 358834..358910 Clostridium clariflavum DSM 19732 11560330 Clocl_0379 tRNA Clocl_0379 NC_016627.1 412027 412103 D tRNA-Met 412027..412103 Clostridium clariflavum DSM 19732 11560372 Clocl_0380 tRNA Clocl_0380 NC_016627.1 412110 412181 D tRNA-Glu 412110..412181 Clostridium clariflavum DSM 19732 11560373 Clocl_0381 tRNA Clocl_0381 NC_016627.1 412189 412264 D tRNA-Val 412189..412264 Clostridium clariflavum DSM 19732 11560374 Clocl_0385 tRNA Clocl_0385 NC_016627.1 416684 416758 D tRNA-Arg 416684..416758 Clostridium clariflavum DSM 19732 11560378 Clocl_0504 tRNA Clocl_0504 NC_016627.1 581410 581485 D tRNA-Val 581410..581485 Clostridium clariflavum DSM 19732 11560497 Clocl_0505 tRNA Clocl_0505 NC_016627.1 581492 581568 D tRNA-Asp 581492..581568 Clostridium clariflavum DSM 19732 11560498 Clocl_0506 tRNA Clocl_0506 NC_016627.1 581573 581648 D tRNA-Phe 581573..581648 Clostridium clariflavum DSM 19732 11560499 Clocl_0507 tRNA Clocl_0507 NC_016627.1 581658 581732 D tRNA-Gly 581658..581732 Clostridium clariflavum DSM 19732 11560500 Clocl_0508 tRNA Clocl_0508 NC_016627.1 581804 581878 D tRNA-Cys 581804..581878 Clostridium clariflavum DSM 19732 11560501 Clocl_1129 tRNA Clocl_1129 NC_016627.1 1322941 1323015 D tRNA-Gly 1322941..1323015 Clostridium clariflavum DSM 19732 11561498 Clocl_1130 tRNA Clocl_1130 NC_016627.1 1323056 1323129 D tRNA-Gly 1323056..1323129 Clostridium clariflavum DSM 19732 11561499 Clocl_1233 tRNA Clocl_1233 NC_016627.1 1420768 1420841 D tRNA-Gly 1420768..1420841 Clostridium clariflavum DSM 19732 11561602 Clocl_1234 tRNA Clocl_1234 NC_016627.1 1420856 1420932 D tRNA-Arg 1420856..1420932 Clostridium clariflavum DSM 19732 11561603 Clocl_1295 tRNA Clocl_1295 NC_016627.1 1502810 1502886 D tRNA-His 1502810..1502886 Clostridium clariflavum DSM 19732 11561664 Clocl_1296 tRNA Clocl_1296 NC_016627.1 1502890 1502966 D tRNA-Gln 1502890..1502966 Clostridium clariflavum DSM 19732 11561665 Clocl_1297 tRNA Clocl_1297 NC_016627.1 1502970 1503045 D tRNA-Lys 1502970..1503045 Clostridium clariflavum DSM 19732 11561666 Clocl_1325 tRNA Clocl_1325 NC_016627.1 1532844 1532927 D tRNA-Leu 1532844..1532927 Clostridium clariflavum DSM 19732 11561694 Clocl_1462 tRNA Clocl_1462 NC_016627.1 1684695 1684770 R tRNA-Trp complement(1684695..1684770) Clostridium clariflavum DSM 19732 11561830 Clocl_1663 tRNA Clocl_1663 NC_016627.1 1904838 1904915 D tRNA-Pro 1904838..1904915 Clostridium clariflavum DSM 19732 11562031 Clocl_1674 tRNA Clocl_1674 NC_016627.1 1915785 1915871 R tRNA-Leu complement(1915785..1915871) Clostridium clariflavum DSM 19732 11562042 Clocl_1678 tRNA Clocl_1678 NC_016627.1 1919422 1919506 R tRNA-Tyr complement(1919422..1919506) Clostridium clariflavum DSM 19732 11562046 Clocl_1679 tRNA Clocl_1679 NC_016627.1 1919518 1919593 R tRNA-Phe complement(1919518..1919593) Clostridium clariflavum DSM 19732 11562047 Clocl_1680 tRNA Clocl_1680 NC_016627.1 1919611 1919687 R tRNA-Met complement(1919611..1919687) Clostridium clariflavum DSM 19732 11562048 Clocl_1906 tRNA Clocl_1906 NC_016627.1 2199726 2199801 R tRNA-Lys complement(2199726..2199801) Clostridium clariflavum DSM 19732 11562274 Clocl_1907 tRNA Clocl_1907 NC_016627.1 2200138 2200224 D tRNA-Leu 2200138..2200224 Clostridium clariflavum DSM 19732 11562275 Clocl_2115 tRNA Clocl_2115 NC_016627.1 2427434 2427510 R tRNA-Met complement(2427434..2427510) Clostridium clariflavum DSM 19732 11562532 Clocl_2116 tRNA Clocl_2116 NC_016627.1 2427514 2427589 R tRNA-Asn complement(2427514..2427589) Clostridium clariflavum DSM 19732 11562533 Clocl_2267 tRNA Clocl_2267 NC_016627.1 2601379 2601454 R tRNA-Asn complement(2601379..2601454) Clostridium clariflavum DSM 19732 11562683 Clocl_2410 tRNA Clocl_2410 NC_016627.1 2754812 2754894 D tRNA-Leu 2754812..2754894 Clostridium clariflavum DSM 19732 11562826 Clocl_2558 tRNA Clocl_2558 NC_016627.1 2945197 2945269 R tRNA-Ala complement(2945197..2945269) Clostridium clariflavum DSM 19732 11562974 Clocl_2741 tRNA Clocl_2741 NC_016627.1 3181301 3181374 R tRNA-Gln complement(3181301..3181374) Clostridium clariflavum DSM 19732 11563157 Clocl_2754 tRNA Clocl_2754 NC_016627.1 3200420 3200494 R tRNA-Glu complement(3200420..3200494) Clostridium clariflavum DSM 19732 11563170 Clocl_2868 tRNA Clocl_2868 NC_016627.1 3342094 3342170 R tRNA-Val complement(3342094..3342170) Clostridium clariflavum DSM 19732 11563284 Clocl_3007 tRNA Clocl_3007 NC_016627.1 3509014 3509088 R tRNA-Thr complement(3509014..3509088) Clostridium clariflavum DSM 19732 11563422 Clocl_3264 tRNA Clocl_3264 NC_016627.1 3823822 3823897 R tRNA-Asn complement(3823822..3823897) Clostridium clariflavum DSM 19732 11563679 Clocl_3267 tRNA Clocl_3267 NC_016627.1 3827407 3827482 R tRNA-Ala complement(3827407..3827482) Clostridium clariflavum DSM 19732 11563682 Clocl_3284 tRNA Clocl_3284 NC_016627.1 3847020 3847104 R tRNA-Tyr complement(3847020..3847104) Clostridium clariflavum DSM 19732 11563699 Clocl_3285 tRNA Clocl_3285 NC_016627.1 3847109 3847184 R tRNA-Thr complement(3847109..3847184) Clostridium clariflavum DSM 19732 11563700 Clocl_3286 tRNA Clocl_3286 NC_016627.1 3847199 3847275 R tRNA-Asp complement(3847199..3847275) Clostridium clariflavum DSM 19732 11563701 Clocl_3287 tRNA Clocl_3287 NC_016627.1 3847354 3847428 R tRNA-Glu complement(3847354..3847428) Clostridium clariflavum DSM 19732 11563702 Clocl_3288 tRNA Clocl_3288 NC_016627.1 3848091 3848166 D tRNA-Lys 3848091..3848166 Clostridium clariflavum DSM 19732 11563703 Clocl_3444 tRNA Clocl_3444 NC_016627.1 4061324 4061398 R tRNA-Arg complement(4061324..4061398) Clostridium clariflavum DSM 19732 11563857 Clocl_3837 tRNA Clocl_3837 NC_016627.1 4459478 4459553 R tRNA-Pro complement(4459478..4459553) Clostridium clariflavum DSM 19732 11564248 Clocl_3905 tRNA Clocl_3905 NC_016627.1 4516202 4516278 R tRNA-Ile complement(4516202..4516278) Clostridium clariflavum DSM 19732 11560649 Clocl_3965 tRNA Clocl_3965 NC_016627.1 4599604 4599680 D tRNA-Gln 4599604..4599680 Clostridium clariflavum DSM 19732 11560709 Clocl_3966 tRNA Clocl_3966 NC_016627.1 4599684 4599759 D tRNA-Lys 4599684..4599759 Clostridium clariflavum DSM 19732 11560710 Clocl_3975 tRNA Clocl_3975 NC_016627.1 4611673 4611748 R tRNA-Thr complement(4611673..4611748) Clostridium clariflavum DSM 19732 11560719 Clocl_3976 tRNA Clocl_3976 NC_016627.1 4611762 4611835 R tRNA-Gly complement(4611762..4611835) Clostridium clariflavum DSM 19732 11560720 Clocl_4119 tRNA Clocl_4119 NC_016627.1 4757498 4757573 R tRNA-Thr complement(4757498..4757573) Clostridium clariflavum DSM 19732 11560864 Clocl_4120 tRNA Clocl_4120 NC_016627.1 4757834 4757909 R tRNA-Val complement(4757834..4757909) Clostridium clariflavum DSM 19732 11560865 Clocl_4125 tRNA Clocl_4125 NC_016627.1 4763799 4763874 R tRNA-Pro complement(4763799..4763874) Clostridium clariflavum DSM 19732 11560870 Clocl_4164 tRNA Clocl_4164 NC_016627.1 4810953 4811044 R tRNA-Ser complement(4810953..4811044) Clostridium clariflavum DSM 19732 11560912 Clocl_4219 tRNA Clocl_4219 NC_016627.1 4884474 4884549 R tRNA-Ala complement(4884474..4884549) Clostridium clariflavum DSM 19732 11560968 Clocl_2268 rRNA Clocl_2268 NC_016627.1 2601461 2601577 R 5S ribosomal RNA complement(2601461..2601577) Clostridium clariflavum DSM 19732 11562684 Clocl_2269 rRNA Clocl_2269 NC_016627.1 2601736 2605074 R 23S ribosomal RNA complement(2601736..2605074) Clostridium clariflavum DSM 19732 11562685 Clocl_2270 rRNA Clocl_2270 NC_016627.1 2605440 2606806 R 16S ribosomal RNA complement(2605440..2606806) Clostridium clariflavum DSM 19732 11562686 Clocl_3265 rRNA Clocl_3265 NC_016627.1 3823904 3824020 R 5S ribosomal RNA complement(3823904..3824020) Clostridium clariflavum DSM 19732 11563680 Clocl_3266 rRNA Clocl_3266 NC_016627.1 3824179 3827238 R 23S ribosomal RNA complement(3824179..3827238) Clostridium clariflavum DSM 19732 11563681 Clocl_3268 rRNA Clocl_3268 NC_016627.1 3827709 3829075 R 16S ribosomal RNA complement(3827709..3829075) Clostridium clariflavum DSM 19732 11563683 Clocl_3314 rRNA Clocl_3314 NC_016627.1 3886952 3887068 R 5S ribosomal RNA complement(3886952..3887068) Clostridium clariflavum DSM 19732 11563727 Clocl_3315 rRNA Clocl_3315 NC_016627.1 3887227 3890565 R 23S ribosomal RNA complement(3887227..3890565) Clostridium clariflavum DSM 19732 11563728 Clocl_3316 rRNA Clocl_3316 NC_016627.1 3890932 3892298 R 16S ribosomal RNA complement(3890932..3892298) Clostridium clariflavum DSM 19732 11563729 Clocl_3899 rRNA Clocl_3899 NC_016627.1 4504920 4505036 R 5S ribosomal RNA complement(4504920..4505036) Clostridium clariflavum DSM 19732 11560643 Clocl_3900 rRNA Clocl_3900 NC_016627.1 4505195 4508235 R 23S ribosomal RNA complement(4505195..4508235) Clostridium clariflavum DSM 19732 11560644 Clocl_3901 rRNA Clocl_3901 NC_016627.1 4508602 4509968 R 16S ribosomal RNA complement(4508602..4509968) Clostridium clariflavum DSM 19732 11560645 Clocl_3903 rRNA Clocl_3903 NC_016627.1 4512420 4512536 R 5S ribosomal RNA complement(4512420..4512536) Clostridium clariflavum DSM 19732 11560647 Clocl_3904 rRNA Clocl_3904 NC_016627.1 4512695 4516034 R 23S ribosomal RNA complement(4512695..4516034) Clostridium clariflavum DSM 19732 11560648 Clocl_3906 rRNA Clocl_3906 NC_016627.1 4516505 4517871 R 16S ribosomal RNA complement(4516505..4517871) Clostridium clariflavum DSM 19732 11560650 Clocl_4217 rRNA Clocl_4217 NC_016627.1 4880692 4880808 R 5S ribosomal RNA complement(4880692..4880808) Clostridium clariflavum DSM 19732 11560966 Clocl_4218 rRNA Clocl_4218 NC_016627.1 4880967 4884305 R 23S ribosomal RNA complement(4880967..4884305) Clostridium clariflavum DSM 19732 11560967 Clocl_4220 rRNA Clocl_4220 NC_016627.1 4884776 4886142 R 16S ribosomal RNA complement(4884776..4886142) Clostridium clariflavum DSM 19732 11560969