-- dump date 20140619_043959 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005044685.1 374294494 11560730 567..1901 1 NC_016627.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 1901 11560730 Clocl_0001 Clostridium clariflavum DSM 19732 chromosomal replication initiator protein DnaA YP_005044685.1 567 D 720554 CDS YP_005044686.1 374294495 11560873 2304..3407 1 NC_016627.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 3407 11560873 Clocl_0002 Clostridium clariflavum DSM 19732 DNA polymerase III subunit beta YP_005044686.1 2304 D 720554 CDS YP_005044687.1 374294496 11560875 3430..3636 1 NC_016627.1 PFAM: S4 domain; TIGRFAM: S4 domain protein YaaA; S4 domain-containing protein YaaA 3636 11560875 Clocl_0003 Clostridium clariflavum DSM 19732 S4 domain-containing protein YaaA YP_005044687.1 3430 D 720554 CDS YP_005044688.1 374294497 11560881 3654..4766 1 NC_016627.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; manually curated; DNA replication and repair protein RecF 4766 11560881 Clocl_0004 Clostridium clariflavum DSM 19732 DNA replication and repair protein RecF YP_005044688.1 3654 D 720554 CDS YP_005044689.1 374294498 11560921 5004..5276 1 NC_016627.1 hypothetical protein 5276 11560921 Clocl_0005 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044689.1 5004 D 720554 CDS YP_005044690.1 374294499 11560975 5433..7358 1 NC_016627.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; manually curated; DNA gyrase subunit B 7358 11560975 Clocl_0006 Clostridium clariflavum DSM 19732 DNA gyrase subunit B YP_005044690.1 5433 D 720554 CDS YP_005044691.1 374294500 11560977 7819..8598 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase 8598 11560977 Clocl_0007 Clostridium clariflavum DSM 19732 chromosome partitioning ATPase YP_005044691.1 7819 D 720554 CDS YP_005044692.1 374294501 11560979 8595..9446 1 NC_016627.1 PFAM: Sugar-specific transcriptional regulator TrmB; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; manually curated; ParB-like partition protein 9446 11560979 Clocl_0008 Clostridium clariflavum DSM 19732 ParB-like partition protein YP_005044692.1 8595 D 720554 CDS YP_005044693.1 374294502 11560728 9668..10186 1 NC_016627.1 hypothetical protein 10186 11560728 Clocl_0009 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044693.1 9668 D 720554 CDS YP_005044694.1 374294503 11562279 10529..11263 1 NC_016627.1 PFAM: Tetratricopeptide repeat; manually curated; hypothetical protein 11263 11562279 Clocl_0010 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044694.1 10529 D 720554 CDS YP_005044695.1 374294504 11562280 11552..12823 1 NC_016627.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 12823 11562280 Clocl_0011 Clostridium clariflavum DSM 19732 seryl-tRNA synthetase YP_005044695.1 11552 D 720554 CDS YP_005044696.1 374294505 11562283 complement(13543..14949) 1 NC_016627.1 PFAM: Major Facilitator Superfamily; manually curated; arabinose efflux permease family protein 14949 11562283 Clocl_0014 Clostridium clariflavum DSM 19732 arabinose efflux permease family protein YP_005044696.1 13543 R 720554 CDS YP_005044697.1 374294506 11562284 complement(15314..16798) 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; NADH/NADPH-dependent glutamate synthase small subunit 16798 11562284 Clocl_0015 Clostridium clariflavum DSM 19732 NADH/NADPH-dependent glutamate synthase small subunit YP_005044697.1 15314 R 720554 CDS YP_005044698.1 374294507 11562285 complement(16815..21395) 1 NC_016627.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase family protein 21395 11562285 Clocl_0016 Clostridium clariflavum DSM 19732 glutamate synthase family protein YP_005044698.1 16815 R 720554 CDS YP_005044699.1 374294508 11562286 complement(21902..22405) 1 NC_016627.1 hypothetical protein 22405 11562286 Clocl_0017 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044699.1 21902 R 720554 CDS YP_005044700.1 374294509 11562287 complement(22517..23098) 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 23098 11562287 Clocl_0018 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005044700.1 22517 R 720554 CDS YP_005044701.1 374294510 11562288 23568..24074 1 NC_016627.1 hypothetical protein 24074 11562288 Clocl_0019 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044701.1 23568 D 720554 CDS YP_005044702.1 374294511 11562289 complement(24282..26012) 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; G5 domain; VanW like protein; putative vancomycin resistance protein 26012 11562289 Clocl_0020 Clostridium clariflavum DSM 19732 putative vancomycin resistance protein YP_005044702.1 24282 R 720554 CDS YP_005044703.1 374294512 11562290 26470..26793 1 NC_016627.1 PFAM: Protein of unknown function (DUF2508); hypothetical protein 26793 11562290 Clocl_0021 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044703.1 26470 D 720554 CDS YP_005044704.1 374294513 11562291 27116..27388 1 NC_016627.1 PFAM: SigmaK-factor processing regulatory protein BofA; TIGRFAM: pro-sigmaK processing inhibitor BofA; pro-sigmaK processing inhibitor BofA 27388 11562291 Clocl_0022 Clostridium clariflavum DSM 19732 pro-sigmaK processing inhibitor BofA YP_005044704.1 27116 D 720554 CDS YP_005044705.1 374294514 11562292 27818..31366 1 NC_016627.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 31366 11562292 Clocl_0023 Clostridium clariflavum DSM 19732 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_005044705.1 27818 D 720554 CDS YP_005044706.1 374294515 11562293 complement(31483..31611) 1 NC_016627.1 hypothetical protein 31611 11562293 Clocl_0024 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044706.1 31483 R 720554 CDS YP_005044707.1 374294516 11562294 complement(31894..32736) 1 NC_016627.1 hypothetical protein 32736 11562294 Clocl_0025 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044707.1 31894 R 720554 CDS YP_005044708.1 374294517 11562295 complement(32945..33664) 1 NC_016627.1 PFAM: Helix-turn-helix; Helix-turn-helix protein 33664 11562295 Clocl_0026 Clostridium clariflavum DSM 19732 Helix-turn-helix protein YP_005044708.1 32945 R 720554 CDS YP_005044709.1 374294518 11562296 34085..34351 1 NC_016627.1 manually curated; hypothetical protein 34351 11562296 Clocl_0027 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044709.1 34085 D 720554 CDS YP_005044710.1 374294519 11562297 34550..35536 1 NC_016627.1 PFAM: Choline/ethanolamine kinase; TIGRFAM: spore coat protein, CotS family; CotS family spore coat protein 35536 11562297 Clocl_0028 Clostridium clariflavum DSM 19732 CotS family spore coat protein YP_005044710.1 34550 D 720554 CDS YP_005044711.1 374294520 11562298 complement(35772..37442) 1 NC_016627.1 PFAM: Formate--tetrahydrofolate ligase; formyltetrahydrofolate synthetase 37442 11562298 Clocl_0029 Clostridium clariflavum DSM 19732 formyltetrahydrofolate synthetase YP_005044711.1 35772 R 720554 CDS YP_005044712.1 374294521 11562299 join(37750..38010,38010..38621) 1 NC_016627.1 PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG; manually curated; sporulation peptidase YabG 38621 11562299 Clocl_0030 Clostridium clariflavum DSM 19732 sporulation peptidase YabG YP_005044712.1 37750 D 720554 CDS YP_005044713.1 374294522 11562300 38742..39005 1 NC_016627.1 PFAM: Protein of unknown function (DUF1021); hypothetical protein 39005 11562300 Clocl_0031 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044713.1 38742 D 720554 CDS YP_005044714.1 374294523 11562301 complement(38925..39122) 1 NC_016627.1 hypothetical protein 39122 11562301 Clocl_0032 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044714.1 38925 R 720554 CDS YP_005044715.1 374294524 11562302 39285..40856 1 NC_016627.1 PFAM: LysM domain; LysM repeat-containing protein 40856 11562302 Clocl_0033 Clostridium clariflavum DSM 19732 LysM repeat-containing protein YP_005044715.1 39285 D 720554 CDS YP_005044716.1 374294525 11562303 41300..42169 1 NC_016627.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 42169 11562303 Clocl_0034 Clostridium clariflavum DSM 19732 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_005044716.1 41300 D 720554 CDS YP_005044717.1 374294526 11562304 42177..42854 1 NC_016627.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 42854 11562304 Clocl_0035 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005044717.1 42177 D 720554 CDS YP_005044718.1 374294527 11562305 complement(42955..43161) 1 NC_016627.1 PFAM: Heavy-metal-associated domain; copper chaperone 43161 11562305 Clocl_0036 Clostridium clariflavum DSM 19732 copper chaperone YP_005044718.1 42955 R 720554 CDS YP_005044719.1 374294528 11562306 43580..44701 1 NC_016627.1 PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 44701 11562306 Clocl_0037 Clostridium clariflavum DSM 19732 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_005044719.1 43580 D 720554 CDS YP_005044720.1 374294529 11562307 44841..46469 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); AAA ATPase 46469 11562307 Clocl_0038 Clostridium clariflavum DSM 19732 AAA ATPase YP_005044720.1 44841 D 720554 CDS YP_005044721.1 374294530 11562308 46575..47354 1 NC_016627.1 phage shock protein A (IM30), suppresses sigma54-dependent transcription 47354 11562308 Clocl_0039 Clostridium clariflavum DSM 19732 phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_005044721.1 46575 D 720554 CDS YP_005044722.1 374294531 11562309 47492..48271 1 NC_016627.1 hypothetical protein 48271 11562309 Clocl_0040 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044722.1 47492 D 720554 CDS YP_005044723.1 374294532 11562310 48412..50004 1 NC_016627.1 PFAM: Protein of unknown function (DUF342); manually curated; putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon 50004 11562310 Clocl_0041 Clostridium clariflavum DSM 19732 putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon YP_005044723.1 48412 D 720554 CDS YP_005044724.1 374294533 11562311 50047..51180 1 NC_016627.1 PFAM: Calcineurin-like phosphoesterase; DNA repair exonuclease 51180 11562311 Clocl_0042 Clostridium clariflavum DSM 19732 DNA repair exonuclease YP_005044724.1 50047 D 720554 CDS YP_005044725.1 374294534 11562312 51207..53831 1 NC_016627.1 manually curated; hypothetical protein 53831 11562312 Clocl_0043 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044725.1 51207 D 720554 CDS YP_005044726.1 374294535 11562313 53902..54855 1 NC_016627.1 PFAM: NlpC/P60 family; Bacterial SH3 domain; cell wall-associated hydrolase, invasion-associated protein 54855 11562313 Clocl_0044 Clostridium clariflavum DSM 19732 cell wall-associated hydrolase, invasion-associated protein YP_005044726.1 53902 D 720554 CDS YP_005044727.1 374294536 11562314 complement(55027..56265) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 10; beta-1,4-xylanase 56265 11562314 Clocl_0045 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005044727.1 55027 R 720554 CDS YP_005044728.1 374294537 11562315 complement(56572..58227) 1 NC_016627.1 hypothetical protein 58227 11562315 Clocl_0046 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044728.1 56572 R 720554 CDS YP_005044729.1 374294538 11562316 complement(58217..59119) 1 NC_016627.1 manually curated; hypothetical protein 59119 11562316 Clocl_0047 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044729.1 58217 R 720554 CDS YP_005044730.1 374294539 11562317 complement(59116..60105) 1 NC_016627.1 PFAM: von Willebrand factor type A domain; manually curated; Mg-chelatase subunit ChlD 60105 11562317 Clocl_0048 Clostridium clariflavum DSM 19732 Mg-chelatase subunit ChlD YP_005044730.1 59116 R 720554 CDS YP_005044731.1 374294540 11562318 complement(60138..61103) 1 NC_016627.1 PFAM: von Willebrand factor type A domain; TIGRFAM: N-terminal double-transmembrane domain; hypothetical protein 61103 11562318 Clocl_0049 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044731.1 60138 R 720554 CDS YP_005044732.1 374294541 11562319 complement(61100..61894) 1 NC_016627.1 hypothetical protein 61894 11562319 Clocl_0050 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044732.1 61100 R 720554 CDS YP_005044733.1 374294542 11562320 complement(61891..62712) 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 62712 11562320 Clocl_0051 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044733.1 61891 R 720554 CDS YP_005044734.1 374294543 11562321 complement(62735..63685) 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 63685 11562321 Clocl_0052 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005044734.1 62735 R 720554 CDS YP_005044735.1 374294544 11562322 complement(64112..65221) 1 NC_016627.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 65221 11562322 Clocl_0053 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005044735.1 64112 R 720554 CDS YP_005044736.1 374294545 11562323 65703..66398 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme; spore cortex-lytic protein 66398 11562323 Clocl_0054 Clostridium clariflavum DSM 19732 spore cortex-lytic protein YP_005044736.1 65703 D 720554 CDS YP_005044737.1 374294546 11562324 66413..67804 1 NC_016627.1 TIGRFAM: germination protein YpeB; germination protein YpeB 67804 11562324 Clocl_0055 Clostridium clariflavum DSM 19732 germination protein YpeB YP_005044737.1 66413 D 720554 CDS YP_005044738.1 374294547 11562325 68106..69185 1 NC_016627.1 PFAM: CAAX amino terminal protease family; putative metal-dependent membrane protease 69185 11562325 Clocl_0056 Clostridium clariflavum DSM 19732 putative metal-dependent membrane protease YP_005044738.1 68106 D 720554 CDS YP_005044739.1 374294548 11562326 complement(69450..70493) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 70493 11562326 Clocl_0057 Clostridium clariflavum DSM 19732 DNA replication protein YP_005044739.1 69450 R 720554 CDS YP_005044740.1 374294549 11562327 complement(70561..71541) 1 NC_016627.1 PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain; DnaD-like protein 71541 11562327 Clocl_0058 Clostridium clariflavum DSM 19732 DnaD-like protein YP_005044740.1 70561 R 720554 CDS YP_005044741.1 374294550 11560053 complement(71944..73467) 1 NC_016627.1 hypothetical protein 73467 11560053 Clocl_0060 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044741.1 71944 R 720554 CDS YP_005044742.1 374294551 11560054 73660..74460 1 NC_016627.1 PFAM: MotA/TolQ/ExbB proton channel family; flagellar motor component 74460 11560054 Clocl_0061 Clostridium clariflavum DSM 19732 flagellar motor component YP_005044742.1 73660 D 720554 CDS YP_005044743.1 374294552 11560055 74512..75291 1 NC_016627.1 PFAM: OmpA family; flagellar motor protein 75291 11560055 Clocl_0062 Clostridium clariflavum DSM 19732 flagellar motor protein YP_005044743.1 74512 D 720554 CDS YP_005044744.1 374294553 11560056 75429..76412 1 NC_016627.1 PFAM: Protein of unknown function (DUF1385); putative metal-dependent enzyme 76412 11560056 Clocl_0063 Clostridium clariflavum DSM 19732 putative metal-dependent enzyme YP_005044744.1 75429 D 720554 CDS YP_005044745.1 374294554 11560057 76455..77300 1 NC_016627.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase 77300 11560057 Clocl_0064 Clostridium clariflavum DSM 19732 protein-(glutamine-N5) methyltransferase YP_005044745.1 76455 D 720554 CDS YP_005044746.1 374294555 11560058 complement(77278..78351) 1 NC_016627.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI; sporulation integral membrane protein YtvI 78351 11560058 Clocl_0065 Clostridium clariflavum DSM 19732 sporulation integral membrane protein YtvI YP_005044746.1 77278 R 720554 CDS YP_005044747.1 374294556 11560059 78961..80280 1 NC_016627.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 80280 11560059 Clocl_0066 Clostridium clariflavum DSM 19732 RnfABCDGE type electron transport complex subunit C YP_005044747.1 78961 D 720554 CDS YP_005044748.1 374294557 11560060 80282..81271 1 NC_016627.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; RnfABCDGE type electron transport complex subunit D 81271 11560060 Clocl_0067 Clostridium clariflavum DSM 19732 RnfABCDGE type electron transport complex subunit D YP_005044748.1 80282 D 720554 CDS YP_005044749.1 374294558 11560061 81264..81863 1 NC_016627.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 81863 11560061 Clocl_0068 Clostridium clariflavum DSM 19732 RnfABCDGE type electron transport complex subunit G YP_005044749.1 81264 D 720554 CDS YP_005044750.1 374294559 11560062 81860..82525 1 NC_016627.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; RnfABCDGE type electron transport complex subunit E 82525 11560062 Clocl_0069 Clostridium clariflavum DSM 19732 RnfABCDGE type electron transport complex subunit E YP_005044750.1 81860 D 720554 CDS YP_005044751.1 374294560 11560063 82525..83106 1 NC_016627.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 83106 11560063 Clocl_0070 Clostridium clariflavum DSM 19732 RnfABCDGE type electron transport complex subunit A YP_005044751.1 82525 D 720554 CDS YP_005044752.1 374294561 11560064 83145..83930 1 NC_016627.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; RnfABCDGE type electron transport complex subunit B 83930 11560064 Clocl_0071 Clostridium clariflavum DSM 19732 RnfABCDGE type electron transport complex subunit B YP_005044752.1 83145 D 720554 CDS YP_005044753.1 374294562 11560065 complement(84193..84465) 1 NC_016627.1 hypothetical protein 84465 11560065 Clocl_0072 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044753.1 84193 R 720554 CDS YP_005044754.1 374294563 11560066 84705..85217 1 NC_016627.1 PFAM: Shikimate kinase; shikimate kinase 85217 11560066 Clocl_0073 Clostridium clariflavum DSM 19732 shikimate kinase YP_005044754.1 84705 D 720554 CDS YP_005044755.1 374294564 11560067 85513..86496 1 NC_016627.1 PFAM: Glycosyl hydrolases family 43; beta-xylosidase 86496 11560067 Clocl_0074 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005044755.1 85513 D 720554 CDS YP_005044756.1 374294565 11560068 complement(86589..87704) 1 NC_016627.1 PFAM: Thermophilic metalloprotease (M29); leucyl aminopeptidase 87704 11560068 Clocl_0075 Clostridium clariflavum DSM 19732 leucyl aminopeptidase YP_005044756.1 86589 R 720554 CDS YP_005044757.1 374294566 11560069 complement(87701..89509) 1 NC_016627.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F; oligoendopeptidase F 89509 11560069 Clocl_0076 Clostridium clariflavum DSM 19732 oligoendopeptidase F YP_005044757.1 87701 R 720554 CDS YP_005044758.1 374294567 11560070 complement(89528..89887) 1 NC_016627.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; putative pyrophosphatase 89887 11560070 Clocl_0077 Clostridium clariflavum DSM 19732 putative pyrophosphatase YP_005044758.1 89528 R 720554 CDS YP_005044759.1 374294568 11560071 complement(90174..93323) 1 NC_016627.1 PFAM: S-layer homology domain; Fibronectin type III domain; fibronectin type 3 domain-containing protein 93323 11560071 Clocl_0078 Clostridium clariflavum DSM 19732 fibronectin type 3 domain-containing protein YP_005044759.1 90174 R 720554 CDS YP_005044760.1 374294569 11560072 complement(93445..94839) 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric; NADPH-dependent glutamate synthase, homotetrameric 94839 11560072 Clocl_0079 Clostridium clariflavum DSM 19732 NADPH-dependent glutamate synthase, homotetrameric YP_005044760.1 93445 R 720554 CDS YP_005044761.1 374294570 11560073 complement(94832..95677) 1 NC_016627.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; 2-polyprenylphenol 6-hydroxylase 95677 11560073 Clocl_0080 Clostridium clariflavum DSM 19732 2-polyprenylphenol 6-hydroxylase YP_005044761.1 94832 R 720554 CDS YP_005044762.1 374294571 11560074 96036..97307 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18; putative glycosyl hydrolase 97307 11560074 Clocl_0081 Clostridium clariflavum DSM 19732 putative glycosyl hydrolase YP_005044762.1 96036 D 720554 CDS YP_005044763.1 374294572 11560075 98029..99369 1 NC_016627.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase/leucine dehydrogenase 99369 11560075 Clocl_0082 Clostridium clariflavum DSM 19732 glutamate dehydrogenase/leucine dehydrogenase YP_005044763.1 98029 D 720554 CDS YP_005044764.1 374294573 11560076 99663..99821 1 NC_016627.1 hypothetical protein 99821 11560076 Clocl_0083 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044764.1 99663 D 720554 CDS YP_005044765.1 374294574 11560078 100144..100608 1 NC_016627.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytosine/adenosine deaminase 100608 11560078 Clocl_0085 Clostridium clariflavum DSM 19732 cytosine/adenosine deaminase YP_005044765.1 100144 D 720554 CDS YP_005044766.1 374294575 11560080 101003..102325 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; Na+-driven multidrug efflux pump 102325 11560080 Clocl_0087 Clostridium clariflavum DSM 19732 Na+-driven multidrug efflux pump YP_005044766.1 101003 D 720554 CDS YP_005044767.1 374294576 11560081 102565..104274 1 NC_016627.1 PFAM: Alpha-L-arabinofuranosidase B (ABFB); Dockerin type I repeat; Glycosyl hydrolases family 43; beta-xylosidase 104274 11560081 Clocl_0088 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005044767.1 102565 D 720554 CDS YP_005044768.1 374294577 11560082 104844..105296 1 NC_016627.1 hypothetical protein 105296 11560082 Clocl_0089 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044768.1 104844 D 720554 CDS YP_005044769.1 374294578 11560083 105798..106322 1 NC_016627.1 hypothetical protein 106322 11560083 Clocl_0090 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044769.1 105798 D 720554 CDS YP_005044770.1 374294579 11560084 106707..107447 1 NC_016627.1 hypothetical protein 107447 11560084 Clocl_0091 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044770.1 106707 D 720554 CDS YP_005044771.1 374294580 11560085 107536..108819 1 NC_016627.1 PFAM: Protein of unknown function (DUF2791); hypothetical protein 108819 11560085 Clocl_0092 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044771.1 107536 D 720554 CDS YP_005044772.1 374294581 11560086 108857..109552 1 NC_016627.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; looped-hinge helix DNA binding domain, AbrB family 109552 11560086 Clocl_0093 Clostridium clariflavum DSM 19732 looped-hinge helix DNA binding domain, AbrB family YP_005044772.1 108857 D 720554 CDS YP_005044773.1 374294582 11560088 110112..110588 1 NC_016627.1 hypothetical protein 110588 11560088 Clocl_0095 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044773.1 110112 D 720554 CDS YP_005044774.1 374294583 11560089 110642..111118 1 NC_016627.1 hypothetical protein 111118 11560089 Clocl_0096 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044774.1 110642 D 720554 CDS YP_005044775.1 374294584 11560090 111268..111780 1 NC_016627.1 hypothetical protein 111780 11560090 Clocl_0097 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044775.1 111268 D 720554 CDS YP_005044776.1 374294585 11560091 111997..112398 1 NC_016627.1 hypothetical protein 112398 11560091 Clocl_0098 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044776.1 111997 D 720554 CDS YP_005044777.1 374294586 11560094 113822..114010 1 NC_016627.1 hypothetical protein 114010 11560094 Clocl_0101 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044777.1 113822 D 720554 CDS YP_005044778.1 374294587 11560095 114007..114147 1 NC_016627.1 hypothetical protein 114147 11560095 Clocl_0102 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044778.1 114007 D 720554 CDS YP_005044779.1 374294588 11560096 114352..114810 1 NC_016627.1 hypothetical protein 114810 11560096 Clocl_0103 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044779.1 114352 D 720554 CDS YP_005044780.1 374294589 11560097 114927..115289 1 NC_016627.1 hypothetical protein 115289 11560097 Clocl_0104 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044780.1 114927 D 720554 CDS YP_005044781.1 374294590 11560098 115365..115616 1 NC_016627.1 hypothetical protein 115616 11560098 Clocl_0105 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044781.1 115365 D 720554 CDS YP_005044782.1 374294591 11560099 115997..116401 1 NC_016627.1 PFAM: Protein of unknown function (DUF3592); hypothetical protein 116401 11560099 Clocl_0106 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044782.1 115997 D 720554 CDS YP_005044783.1 374294592 11560100 complement(116538..117194) 1 NC_016627.1 PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D; H(+)-transporting ATP synthase, vacuolar type, subunit D 117194 11560100 Clocl_0107 Clostridium clariflavum DSM 19732 H(+)-transporting ATP synthase, vacuolar type, subunit D YP_005044783.1 116538 R 720554 CDS YP_005044784.1 374294593 11560101 complement(117402..118784) 1 NC_016627.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase archaeal, B subunit; archaeal/vacuolar-type H+-ATPase subunit B 118784 11560101 Clocl_0108 Clostridium clariflavum DSM 19732 archaeal/vacuolar-type H+-ATPase subunit B YP_005044784.1 117402 R 720554 CDS YP_005044785.1 374294594 11560102 complement(118777..120555) 1 NC_016627.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase archaeal, A subunit; ATP synthase, A subunit 120555 11560102 Clocl_0109 Clostridium clariflavum DSM 19732 ATP synthase, A subunit YP_005044785.1 118777 R 720554 CDS YP_005044786.1 374294595 11560103 complement(120609..120929) 1 NC_016627.1 PFAM: ATP synthase (F/14-kDa) subunit; archaeal/vacuolar-type H+-ATPase subunit F 120929 11560103 Clocl_0110 Clostridium clariflavum DSM 19732 archaeal/vacuolar-type H+-ATPase subunit F YP_005044786.1 120609 R 720554 CDS YP_005044787.1 374294596 11560104 complement(120922..121941) 1 NC_016627.1 PFAM: ATP synthase (C/AC39) subunit; archaeal/vacuolar-type H+-ATPase subunit C 121941 11560104 Clocl_0111 Clostridium clariflavum DSM 19732 archaeal/vacuolar-type H+-ATPase subunit C YP_005044787.1 120922 R 720554 CDS YP_005044788.1 374294597 11560105 complement(121990..122586) 1 NC_016627.1 PFAM: ATP synthase (E/31 kDa) subunit; archaeal/vacuolar-type H+-ATPase subunit E 122586 11560105 Clocl_0112 Clostridium clariflavum DSM 19732 archaeal/vacuolar-type H+-ATPase subunit E YP_005044788.1 121990 R 720554 CDS YP_005044789.1 374294598 11560106 complement(122605..123096) 1 NC_016627.1 PFAM: ATP synthase subunit C; ATP synthase subunit C 123096 11560106 Clocl_0113 Clostridium clariflavum DSM 19732 ATP synthase subunit C YP_005044789.1 122605 R 720554 CDS YP_005044790.1 374294599 11560107 complement(123098..125062) 1 NC_016627.1 PFAM: V-type ATPase 116kDa subunit family; archaeal/vacuolar-type H+-ATPase subunit I 125062 11560107 Clocl_0114 Clostridium clariflavum DSM 19732 archaeal/vacuolar-type H+-ATPase subunit I YP_005044790.1 123098 R 720554 CDS YP_005044791.1 374294600 11560108 complement(125049..125375) 1 NC_016627.1 hypothetical protein 125375 11560108 Clocl_0115 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044791.1 125049 R 720554 CDS YP_005044792.1 374294601 11560109 complement(125851..126192) 1 NC_016627.1 hypothetical protein 126192 11560109 Clocl_0116 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044792.1 125851 R 720554 CDS YP_005044793.1 374294602 11560110 126460..129066 1 NC_016627.1 PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 129066 11560110 Clocl_0117 Clostridium clariflavum DSM 19732 alcohol dehydrogenase YP_005044793.1 126460 D 720554 CDS YP_005044794.1 374294603 11560111 complement(129215..130306) 1 NC_016627.1 PFAM: Domain of unknown function DUF20; manually curated; putative permease 130306 11560111 Clocl_0118 Clostridium clariflavum DSM 19732 putative permease YP_005044794.1 129215 R 720554 CDS YP_005044795.1 374294604 11560112 130556..131824 1 NC_016627.1 PFAM: KWG Leptospira; KWG repeat-containing protein 131824 11560112 Clocl_0119 Clostridium clariflavum DSM 19732 KWG repeat-containing protein YP_005044795.1 130556 D 720554 CDS YP_005044796.1 374294605 11560113 131987..132820 1 NC_016627.1 PFAM: Prephenate dehydratase; ACT domain; prephenate dehydratase 132820 11560113 Clocl_0120 Clostridium clariflavum DSM 19732 prephenate dehydratase YP_005044796.1 131987 D 720554 CDS YP_005044797.1 374294606 11560114 133151..133492 1 NC_016627.1 hypothetical protein 133492 11560114 Clocl_0121 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044797.1 133151 D 720554 CDS YP_005044798.1 374294607 11560115 133524..135533 1 NC_016627.1 PFAM: DHH family; DHHA1 domain; putative signaling protein consisting of a modified GGDEF domain and a DHH domain protein 135533 11560115 Clocl_0122 Clostridium clariflavum DSM 19732 putative signaling protein consisting of a modified GGDEF domain and a DHH domain protein YP_005044798.1 133524 D 720554 CDS YP_005044799.1 374294608 11560116 135565..136011 1 NC_016627.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; manually curated; 50S ribosomal protein L9P 136011 11560116 Clocl_0123 Clostridium clariflavum DSM 19732 50S ribosomal protein L9P YP_005044799.1 135565 D 720554 CDS YP_005044800.1 374294609 11560117 136023..137363 1 NC_016627.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase 137363 11560117 Clocl_0124 Clostridium clariflavum DSM 19732 replicative DNA helicase YP_005044800.1 136023 D 720554 CDS YP_005044801.1 374294610 11560118 137412..138818 1 NC_016627.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; manually curated; tRNA(Ile)-lysidine synthetase 138818 11560118 Clocl_0125 Clostridium clariflavum DSM 19732 tRNA(Ile)-lysidine synthetase YP_005044801.1 137412 D 720554 CDS YP_005044802.1 374294611 11560119 138834..139382 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 139382 11560119 Clocl_0126 Clostridium clariflavum DSM 19732 hypoxanthine phosphoribosyltransferase YP_005044802.1 138834 D 720554 CDS YP_005044803.1 374294612 11560120 139585..141396 1 NC_016627.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; ATP-dependent metalloprotease FtsH 141396 11560120 Clocl_0127 Clostridium clariflavum DSM 19732 ATP-dependent metalloprotease FtsH YP_005044803.1 139585 D 720554 CDS YP_005044804.1 374294613 11560121 141670..142071 1 NC_016627.1 PFAM: Thioesterase superfamily; putative thioesterase 142071 11560121 Clocl_0128 Clostridium clariflavum DSM 19732 putative thioesterase YP_005044804.1 141670 D 720554 CDS YP_005044805.1 374294614 11560122 142095..142286 1 NC_016627.1 hypothetical protein 142286 11560122 Clocl_0129 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044805.1 142095 D 720554 CDS YP_005044806.1 374294615 11560123 142719..143912 1 NC_016627.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 143912 11560123 Clocl_0130 Clostridium clariflavum DSM 19732 S-adenosylmethionine synthetase YP_005044806.1 142719 D 720554 CDS YP_005044807.1 374294616 11560124 144176..146719 1 NC_016627.1 PFAM: Predicted membrane protein (DUF2339); manually curated; hypothetical protein 146719 11560124 Clocl_0131 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044807.1 144176 D 720554 CDS YP_005044808.1 374294617 11560125 146830..147225 1 NC_016627.1 hypothetical protein 147225 11560125 Clocl_0132 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044808.1 146830 D 720554 CDS YP_005044809.1 374294618 11560126 147303..147743 1 NC_016627.1 hypothetical protein 147743 11560126 Clocl_0133 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044809.1 147303 D 720554 CDS YP_005044810.1 374294619 11560127 147989..150202 1 NC_016627.1 PFAM: Putative ATPase (DUF699); TIGRFAM: helicase, putative, RecD/TraA family; helicase, putative, RecD/TraA family 150202 11560127 Clocl_0134 Clostridium clariflavum DSM 19732 helicase, putative, RecD/TraA family YP_005044810.1 147989 D 720554 CDS YP_005044811.1 374294620 11560128 150284..150457 1 NC_016627.1 hypothetical protein 150457 11560128 Clocl_0135 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044811.1 150284 D 720554 CDS YP_005044812.1 374294621 11560130 151335..152993 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III, subunit gamma/tau 152993 11560130 Clocl_0137 Clostridium clariflavum DSM 19732 DNA polymerase III, subunit gamma/tau YP_005044812.1 151335 D 720554 CDS YP_005044813.1 374294622 11560131 153197..153538 1 NC_016627.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; DNA-binding protein, YbaB/EbfC family 153538 11560131 Clocl_0138 Clostridium clariflavum DSM 19732 DNA-binding protein, YbaB/EbfC family YP_005044813.1 153197 D 720554 CDS YP_005044814.1 374294623 11560132 153556..154155 1 NC_016627.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; DNA replication and repair protein RecR 154155 11560132 Clocl_0139 Clostridium clariflavum DSM 19732 DNA replication and repair protein RecR YP_005044814.1 153556 D 720554 CDS YP_005044815.1 374294624 11560133 155467..155955 1 NC_016627.1 PFAM: Pyridoxamine 5'-phosphate oxidase; putative flavin-nucleotide-binding protein 155955 11560133 Clocl_0140 Clostridium clariflavum DSM 19732 putative flavin-nucleotide-binding protein YP_005044815.1 155467 D 720554 CDS YP_005044816.1 374294625 11560135 156931..157599 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 157599 11560135 Clocl_0142 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005044816.1 156931 D 720554 CDS YP_005044817.1 374294626 11560137 157800..158441 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase 158441 11560137 Clocl_0144 Clostridium clariflavum DSM 19732 acetyltransferase YP_005044817.1 157800 D 720554 CDS YP_005044818.1 374294627 11560139 159323..160135 1 NC_016627.1 hypothetical protein 160135 11560139 Clocl_0146 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044818.1 159323 D 720554 CDS YP_005044819.1 374294628 11560140 160271..160858 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 160858 11560140 Clocl_0147 Clostridium clariflavum DSM 19732 Zn-dependent hydrolase YP_005044819.1 160271 D 720554 CDS YP_005044820.1 374294629 11560141 160858..161565 1 NC_016627.1 PFAM: LysE type translocator; putative threonine efflux protein 161565 11560141 Clocl_0148 Clostridium clariflavum DSM 19732 putative threonine efflux protein YP_005044820.1 160858 D 720554 CDS YP_005044821.1 374294630 11560142 161660..162394 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 162394 11560142 Clocl_0149 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005044821.1 161660 D 720554 CDS YP_005044822.1 374294631 11560143 162429..163265 1 NC_016627.1 PFAM: Nucleotidyltransferase domain; putative nucleotidyltransferase 163265 11560143 Clocl_0150 Clostridium clariflavum DSM 19732 putative nucleotidyltransferase YP_005044822.1 162429 D 720554 CDS YP_005044823.1 374294632 11560144 163333..163719 1 NC_016627.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase 163719 11560144 Clocl_0151 Clostridium clariflavum DSM 19732 lactoylglutathione lyase-like lyase YP_005044823.1 163333 D 720554 CDS YP_005044824.1 374294633 11560145 163782..164138 1 NC_016627.1 hypothetical protein 164138 11560145 Clocl_0152 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044824.1 163782 D 720554 CDS YP_005044825.1 374294634 11560146 164187..164792 1 NC_016627.1 hypothetical protein 164792 11560146 Clocl_0153 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044825.1 164187 D 720554 CDS YP_005044826.1 374294635 11560147 165204..165602 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 165602 11560147 Clocl_0154 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005044826.1 165204 D 720554 CDS YP_005044827.1 374294636 11560148 165736..166791 1 NC_016627.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein 166791 11560148 Clocl_0155 Clostridium clariflavum DSM 19732 arsenical-resistance protein YP_005044827.1 165736 D 720554 CDS YP_005044828.1 374294637 11560149 166816..167217 1 NC_016627.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase 167217 11560149 Clocl_0156 Clostridium clariflavum DSM 19732 protein-tyrosine-phosphatase YP_005044828.1 166816 D 720554 CDS YP_005044829.1 374294638 11560150 167325..168341 1 NC_016627.1 PFAM: Predicted permease; manually curated; putative permease 168341 11560150 Clocl_0157 Clostridium clariflavum DSM 19732 putative permease YP_005044829.1 167325 D 720554 CDS YP_005044830.1 374294639 11560151 168419..168904 1 NC_016627.1 PFAM: Predicted permease; putative permease 168904 11560151 Clocl_0158 Clostridium clariflavum DSM 19732 putative permease YP_005044830.1 168419 D 720554 CDS YP_005044831.1 374294640 11560152 168901..169431 1 NC_016627.1 PFAM: Predicted permease; putative permease 169431 11560152 Clocl_0159 Clostridium clariflavum DSM 19732 putative permease YP_005044831.1 168901 D 720554 CDS YP_005044832.1 374294641 11560153 169455..169691 1 NC_016627.1 hypothetical protein 169691 11560153 Clocl_0160 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044832.1 169455 D 720554 CDS YP_005044833.1 374294642 11560155 169949..170176 1 NC_016627.1 TIGRFAM: small redox-active disulfide protein 2; small redox-active disulfide protein 2 170176 11560155 Clocl_0162 Clostridium clariflavum DSM 19732 small redox-active disulfide protein 2 YP_005044833.1 169949 D 720554 CDS YP_005044834.1 374294643 11560157 171003..171563 1 NC_016627.1 PFAM: Protein of unknown function (DUF2703); hypothetical protein 171563 11560157 Clocl_0164 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044834.1 171003 D 720554 CDS YP_005044835.1 374294644 11560158 171774..172607 1 NC_016627.1 PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; chromosome partitioning ATPase 172607 11560158 Clocl_0165 Clostridium clariflavum DSM 19732 chromosome partitioning ATPase YP_005044835.1 171774 D 720554 CDS YP_005044836.1 374294645 11560159 172631..173026 1 NC_016627.1 PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 173026 11560159 Clocl_0166 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044836.1 172631 D 720554 CDS YP_005044837.1 374294646 11560160 173028..173864 1 NC_016627.1 PFAM: 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily 173864 11560160 Clocl_0167 Clostridium clariflavum DSM 19732 P-loop ATPase, MinD superfamily YP_005044837.1 173028 D 720554 CDS YP_005044838.1 374294647 11560161 173849..174709 1 NC_016627.1 PFAM: 4Fe-4S binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily 174709 11560161 Clocl_0168 Clostridium clariflavum DSM 19732 P-loop ATPase, MinD superfamily YP_005044838.1 173849 D 720554 CDS YP_005044839.1 374294648 11560162 174729..175085 1 NC_016627.1 PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 175085 11560162 Clocl_0169 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044839.1 174729 D 720554 CDS YP_005044840.1 374294649 11560163 175103..175588 1 NC_016627.1 PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 175588 11560163 Clocl_0170 Clostridium clariflavum DSM 19732 Fe2+/Zn2+ uptake regulation protein YP_005044840.1 175103 D 720554 CDS YP_005044841.1 374294650 11560164 175573..176007 1 NC_016627.1 PFAM: Protein of unknown function DUF134; putative DNA-binding protein 176007 11560164 Clocl_0171 Clostridium clariflavum DSM 19732 putative DNA-binding protein YP_005044841.1 175573 D 720554 CDS YP_005044842.1 374294651 11560165 complement(176102..176656) 1 NC_016627.1 PFAM: Protein of unknown function (DUF820); hypothetical protein 176656 11560165 Clocl_0172 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044842.1 176102 R 720554 CDS YP_005044843.1 374294652 11560166 complement(176766..177170) 1 NC_016627.1 PFAM: S23 ribosomal protein; S23 ribosomal protein 177170 11560166 Clocl_0173 Clostridium clariflavum DSM 19732 S23 ribosomal protein YP_005044843.1 176766 R 720554 CDS YP_005044844.1 374294653 11560167 177701..178609 1 NC_016627.1 PFAM: StbA protein; actin-like ATPase involved in cell division 178609 11560167 Clocl_0174 Clostridium clariflavum DSM 19732 actin-like ATPase involved in cell division YP_005044844.1 177701 D 720554 CDS YP_005044845.1 374294654 11560168 178614..178904 1 NC_016627.1 hypothetical protein 178904 11560168 Clocl_0175 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044845.1 178614 D 720554 CDS YP_005044846.1 374294655 11560169 complement(179655..179942) 1 NC_016627.1 hypothetical protein 179942 11560169 Clocl_0176 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044846.1 179655 R 720554 CDS YP_005044847.1 374294656 11560170 complement(180268..181092) 1 NC_016627.1 PFAM: Sigma-70, region 4; sigma-70 family RNA polymerase sigma factor 181092 11560170 Clocl_0177 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005044847.1 180268 R 720554 CDS YP_005044848.1 374294657 11560171 181237..182796 1 NC_016627.1 manually curated; hypothetical protein 182796 11560171 Clocl_0178 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044848.1 181237 D 720554 CDS YP_005044849.1 374294658 11560172 183289..183576 1 NC_016627.1 PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 183576 11560172 Clocl_0179 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044849.1 183289 D 720554 CDS YP_005044850.1 374294659 11560173 complement(183831..184076) 1 NC_016627.1 PFAM: Helix-turn-helix; Helix-turn-helix protein 184076 11560173 Clocl_0180 Clostridium clariflavum DSM 19732 Helix-turn-helix protein YP_005044850.1 183831 R 720554 CDS YP_005044851.1 374294660 11560174 184183..185073 1 NC_016627.1 PFAM: Spo0E like sporulation regulatory protein; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 185073 11560174 Clocl_0181 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005044851.1 184183 D 720554 CDS YP_005044852.1 374294661 11560176 185698..186600 1 NC_016627.1 hypothetical protein 186600 11560176 Clocl_0183 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044852.1 185698 D 720554 CDS YP_005044853.1 374294662 11560177 186801..187979 1 NC_016627.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 187979 11560177 Clocl_0184 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005044853.1 186801 D 720554 CDS YP_005044854.1 374294663 11560178 188219..189286 1 NC_016627.1 hypothetical protein 189286 11560178 Clocl_0185 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044854.1 188219 D 720554 CDS YP_005044855.1 374294664 11560179 189748..190599 1 NC_016627.1 PFAM: HNH endonuclease; HNH endonuclease 190599 11560179 Clocl_0186 Clostridium clariflavum DSM 19732 HNH endonuclease YP_005044855.1 189748 D 720554 CDS YP_005044856.1 374294665 11560180 190851..191945 1 NC_016627.1 manually curated; hypothetical protein 191945 11560180 Clocl_0187 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044856.1 190851 D 720554 CDS YP_005044857.1 374294666 11560181 191956..192729 1 NC_016627.1 PFAM: Radical SAM superfamily; DNA repair photolyase 192729 11560181 Clocl_0188 Clostridium clariflavum DSM 19732 DNA repair photolyase YP_005044857.1 191956 D 720554 CDS YP_005044858.1 374294667 11560182 192950..194968 1 NC_016627.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; type I restriction-modification system methyltransferase subunit 194968 11560182 Clocl_0189 Clostridium clariflavum DSM 19732 type I restriction-modification system methyltransferase subunit YP_005044858.1 192950 D 720554 CDS YP_005044859.1 374294668 11560183 194965..196257 1 NC_016627.1 PFAM: Type I restriction modification DNA specificity domain; manually curated; restriction endonuclease S subunit 196257 11560183 Clocl_0190 Clostridium clariflavum DSM 19732 restriction endonuclease S subunit YP_005044859.1 194965 D 720554 CDS YP_005044860.1 374294669 11560184 196282..199266 1 NC_016627.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; helicase, type I site-specific restriction-modification system restriction subunit 199266 11560184 Clocl_0191 Clostridium clariflavum DSM 19732 helicase, type I site-specific restriction-modification system restriction subunit YP_005044860.1 196282 D 720554 CDS YP_005044861.1 374294670 11560185 199290..200168 1 NC_016627.1 PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; ADP-ribosylglycohydrolase 200168 11560185 Clocl_0192 Clostridium clariflavum DSM 19732 ADP-ribosylglycohydrolase YP_005044861.1 199290 D 720554 CDS YP_005044862.1 374294671 11560186 complement(200281..201069) 1 NC_016627.1 hypothetical protein 201069 11560186 Clocl_0193 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044862.1 200281 R 720554 CDS YP_005044863.1 374294672 11560187 complement(201165..201701) 1 NC_016627.1 hypothetical protein 201701 11560187 Clocl_0194 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044863.1 201165 R 720554 CDS YP_005044864.1 374294673 11560188 complement(201839..202381) 1 NC_016627.1 hypothetical protein 202381 11560188 Clocl_0195 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044864.1 201839 R 720554 CDS YP_005044865.1 374294674 11560189 202771..203454 1 NC_016627.1 hypothetical protein 203454 11560189 Clocl_0196 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044865.1 202771 D 720554 CDS YP_005044866.1 374294675 11560190 203447..205726 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; manually curated; DNA/RNA helicase 205726 11560190 Clocl_0197 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005044866.1 203447 D 720554 CDS YP_005044867.1 374294676 11560191 205982..206704 1 NC_016627.1 PFAM: Protein of unknown function (DUF1444); hypothetical protein 206704 11560191 Clocl_0198 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044867.1 205982 D 720554 CDS YP_005044868.1 374294677 11560192 complement(207204..207500) 1 NC_016627.1 hypothetical protein 207500 11560192 Clocl_0199 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044868.1 207204 R 720554 CDS YP_005044869.1 374294678 11560193 207811..208671 1 NC_016627.1 hypothetical protein 208671 11560193 Clocl_0200 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044869.1 207811 D 720554 CDS YP_005044870.1 374294679 11560194 208929..209126 1 NC_016627.1 hypothetical protein 209126 11560194 Clocl_0201 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044870.1 208929 D 720554 CDS YP_005044871.1 374294680 11560195 209234..209323 1 NC_016627.1 hypothetical protein 209323 11560195 Clocl_0202 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044871.1 209234 D 720554 CDS YP_005044872.1 374294681 11560196 complement(209397..210287) 1 NC_016627.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; site-specific recombinase XerD 210287 11560196 Clocl_0203 Clostridium clariflavum DSM 19732 site-specific recombinase XerD YP_005044872.1 209397 R 720554 CDS YP_005044873.1 374294682 11560197 complement(210647..212623) 1 NC_016627.1 hypothetical protein 212623 11560197 Clocl_0204 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044873.1 210647 R 720554 CDS YP_005044874.1 374294683 11560198 213296..213625 1 NC_016627.1 hypothetical protein 213625 11560198 Clocl_0205 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044874.1 213296 D 720554 CDS YP_005044875.1 374294684 11560200 214218..214679 1 NC_016627.1 hypothetical protein 214679 11560200 Clocl_0207 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044875.1 214218 D 720554 CDS YP_005044876.1 374294685 11560201 complement(214728..214913) 1 NC_016627.1 hypothetical protein 214913 11560201 Clocl_0208 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044876.1 214728 R 720554 CDS YP_005044877.1 374294686 11560202 215204..216058 1 NC_016627.1 PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal; TnsA endonuclease 216058 11560202 Clocl_0209 Clostridium clariflavum DSM 19732 TnsA endonuclease YP_005044877.1 215204 D 720554 CDS YP_005044878.1 374294687 11560203 216045..218180 1 NC_016627.1 PFAM: Mu transposase, C-terminal; Integrase core domain; Mu transposase/integrase 218180 11560203 Clocl_0210 Clostridium clariflavum DSM 19732 Mu transposase/integrase YP_005044878.1 216045 D 720554 CDS YP_005044879.1 374294688 11560204 218173..219831 1 NC_016627.1 PFAM: Bacterial TniB protein; TniB protein 219831 11560204 Clocl_0211 Clostridium clariflavum DSM 19732 TniB protein YP_005044879.1 218173 D 720554 CDS YP_005044880.1 374294689 11560205 219837..221723 1 NC_016627.1 hypothetical protein 221723 11560205 Clocl_0212 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044880.1 219837 D 720554 CDS YP_005044881.1 374294690 11560207 226403..226711 1 NC_016627.1 hypothetical protein 226711 11560207 Clocl_0214 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044881.1 226403 D 720554 CDS YP_005044882.1 374294691 11560208 226825..227181 1 NC_016627.1 hypothetical protein 227181 11560208 Clocl_0215 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044882.1 226825 D 720554 CDS YP_005044883.1 374294692 11560209 227215..227799 1 NC_016627.1 hypothetical protein 227799 11560209 Clocl_0216 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044883.1 227215 D 720554 CDS YP_005044884.1 374294693 11560210 complement(227853..228530) 1 NC_016627.1 PFAM: Iron dependent repressor, N-terminal DNA binding domain; Cyclic nucleotide-binding domain; cAMP-binding protein 228530 11560210 Clocl_0217 Clostridium clariflavum DSM 19732 cAMP-binding protein YP_005044884.1 227853 R 720554 CDS YP_005044885.1 374294694 11560211 228626..228955 1 NC_016627.1 PFAM: Cupin domain; cupin domain-containing protein 228955 11560211 Clocl_0218 Clostridium clariflavum DSM 19732 cupin domain-containing protein YP_005044885.1 228626 D 720554 CDS YP_005044886.1 374294695 11560212 228962..229444 1 NC_016627.1 PFAM: Predicted permease; putative permease 229444 11560212 Clocl_0219 Clostridium clariflavum DSM 19732 putative permease YP_005044886.1 228962 D 720554 CDS YP_005044887.1 374294696 11560213 229446..230165 1 NC_016627.1 PFAM: Predicted permease; putative permease 230165 11560213 Clocl_0220 Clostridium clariflavum DSM 19732 putative permease YP_005044887.1 229446 D 720554 CDS YP_005044888.1 374294697 11560215 230684..231331 1 NC_016627.1 PFAM: LysE type translocator; putative threonine efflux protein 231331 11560215 Clocl_0222 Clostridium clariflavum DSM 19732 putative threonine efflux protein YP_005044888.1 230684 D 720554 CDS YP_005044889.1 374294698 11560216 231405..231536 1 NC_016627.1 hypothetical protein 231536 11560216 Clocl_0223 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044889.1 231405 D 720554 CDS YP_005044890.1 374294699 11560217 231523..232452 1 NC_016627.1 PFAM: HD domain; HD-GYP domain-containing protein 232452 11560217 Clocl_0224 Clostridium clariflavum DSM 19732 HD-GYP domain-containing protein YP_005044890.1 231523 D 720554 CDS YP_005044891.1 374294700 11560218 232561..232950 1 NC_016627.1 PFAM: Protein of unknown function (DUF1232); hypothetical protein 232950 11560218 Clocl_0225 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044891.1 232561 D 720554 CDS YP_005044892.1 374294701 11560220 233273..233674 1 NC_016627.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase, glutathione/glutaredoxin type; protein-tyrosine-phosphatase 233674 11560220 Clocl_0227 Clostridium clariflavum DSM 19732 protein-tyrosine-phosphatase YP_005044892.1 233273 D 720554 CDS YP_005044893.1 374294702 11560221 233900..234241 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 234241 11560221 Clocl_0228 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005044893.1 233900 D 720554 CDS YP_005044894.1 374294703 11560222 234256..235272 1 NC_016627.1 PFAM: Predicted permease; putative permease 235272 11560222 Clocl_0229 Clostridium clariflavum DSM 19732 putative permease YP_005044894.1 234256 D 720554 CDS YP_005044895.1 374294704 11560223 235396..235623 1 NC_016627.1 TIGRFAM: small redox-active disulfide protein 2; small redox-active disulfide protein 2 235623 11560223 Clocl_0230 Clostridium clariflavum DSM 19732 small redox-active disulfide protein 2 YP_005044895.1 235396 D 720554 CDS YP_005044896.1 374294705 11560224 235641..236204 1 NC_016627.1 PFAM: Protein of unknown function (DUF2703); hypothetical protein 236204 11560224 Clocl_0231 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044896.1 235641 D 720554 CDS YP_005044897.1 374294706 11560225 236613..237758 1 NC_016627.1 PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain 237758 11560225 Clocl_0232 Clostridium clariflavum DSM 19732 putative transcriptional regulator with HTH domain YP_005044897.1 236613 D 720554 CDS YP_005044898.1 374294707 11560226 237896..238210 1 NC_016627.1 hypothetical protein 238210 11560226 Clocl_0233 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044898.1 237896 D 720554 CDS YP_005044899.1 374294708 11560227 238285..239025 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 239025 11560227 Clocl_0234 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005044899.1 238285 D 720554 CDS YP_005044900.1 374294709 11560228 239057..239890 1 NC_016627.1 PFAM: Nucleotidyltransferase domain; putative nucleotidyltransferase 239890 11560228 Clocl_0235 Clostridium clariflavum DSM 19732 putative nucleotidyltransferase YP_005044900.1 239057 D 720554 CDS YP_005044901.1 374294710 11560229 239958..240374 1 NC_016627.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; lactoylglutathione lyase-like lyase 240374 11560229 Clocl_0236 Clostridium clariflavum DSM 19732 lactoylglutathione lyase-like lyase YP_005044901.1 239958 D 720554 CDS YP_005044902.1 374294711 11560230 240407..240763 1 NC_016627.1 hypothetical protein 240763 11560230 Clocl_0237 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044902.1 240407 D 720554 CDS YP_005044903.1 374294712 11560231 complement(241124..241675) 1 NC_016627.1 PFAM: Protein of unknown function (DUF820); hypothetical protein 241675 11560231 Clocl_0238 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044903.1 241124 R 720554 CDS YP_005044904.1 374294713 11560232 241845..242204 1 NC_016627.1 hypothetical protein 242204 11560232 Clocl_0239 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044904.1 241845 D 720554 CDS YP_005044905.1 374294714 11560233 complement(242307..242693) 1 NC_016627.1 PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; S23 ribosomal protein 242693 11560233 Clocl_0240 Clostridium clariflavum DSM 19732 S23 ribosomal protein YP_005044905.1 242307 R 720554 CDS YP_005044906.1 374294715 11560234 243216..244124 1 NC_016627.1 PFAM: StbA protein; actin-like ATPase involved in cell division 244124 11560234 Clocl_0241 Clostridium clariflavum DSM 19732 actin-like ATPase involved in cell division YP_005044906.1 243216 D 720554 CDS YP_005044907.1 374294716 11560235 244129..244410 1 NC_016627.1 hypothetical protein 244410 11560235 Clocl_0242 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044907.1 244129 D 720554 CDS YP_005044908.1 374294717 11560236 244601..245419 1 NC_016627.1 hypothetical protein 245419 11560236 Clocl_0243 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044908.1 244601 D 720554 CDS YP_005044909.1 374294718 11560237 complement(245989..246276) 1 NC_016627.1 hypothetical protein 246276 11560237 Clocl_0244 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044909.1 245989 R 720554 CDS YP_005044910.1 374294719 11560238 complement(246362..248329) 1 NC_016627.1 PFAM: CHC2 zinc finger; DNA primase 248329 11560238 Clocl_0245 Clostridium clariflavum DSM 19732 DNA primase YP_005044910.1 246362 R 720554 CDS YP_005044911.1 374294720 11560239 248746..249030 1 NC_016627.1 PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 249030 11560239 Clocl_0246 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044911.1 248746 D 720554 CDS YP_005044912.1 374294721 11560240 249237..250133 1 NC_016627.1 PFAM: Spo0E like sporulation regulatory protein; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 250133 11560240 Clocl_0247 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005044912.1 249237 D 720554 CDS YP_005044913.1 374294722 11560241 250383..251450 1 NC_016627.1 hypothetical protein 251450 11560241 Clocl_0248 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044913.1 250383 D 720554 CDS YP_005044914.1 374294723 11560242 252203..252727 1 NC_016627.1 hypothetical protein 252727 11560242 Clocl_0249 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044914.1 252203 D 720554 CDS YP_005044915.1 374294724 11560243 253005..253610 1 NC_016627.1 PFAM: Putative inner membrane protein (DUF1819); hypothetical protein 253610 11560243 Clocl_0250 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044915.1 253005 D 720554 CDS YP_005044916.1 374294725 11560244 253611..254195 1 NC_016627.1 PFAM: Domain of unknown function (DUF1788); hypothetical protein 254195 11560244 Clocl_0251 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044916.1 253611 D 720554 CDS YP_005044917.1 374294726 11560245 254231..257791 1 NC_016627.1 hypothetical protein 257791 11560245 Clocl_0252 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044917.1 254231 D 720554 CDS YP_005044918.1 374294727 11560246 257805..261509 1 NC_016627.1 PFAM: N-6 DNA Methylase; N-6 DNA Methylase 261509 11560246 Clocl_0253 Clostridium clariflavum DSM 19732 N-6 DNA Methylase YP_005044918.1 257805 D 720554 CDS YP_005044919.1 374294728 11560247 261529..264090 1 NC_016627.1 PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein; hypothetical protein 264090 11560247 Clocl_0254 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044919.1 261529 D 720554 CDS YP_005044920.1 374294729 11560248 264114..265331 1 NC_016627.1 hypothetical protein 265331 11560248 Clocl_0255 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044920.1 264114 D 720554 CDS YP_005044921.1 374294730 11560249 265396..267426 1 NC_016627.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein; hypothetical protein 267426 11560249 Clocl_0256 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044921.1 265396 D 720554 CDS YP_005044922.1 374294731 11560250 267523..268533 1 NC_016627.1 hypothetical protein 268533 11560250 Clocl_0257 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044922.1 267523 D 720554 CDS YP_005044923.1 374294732 11560251 268563..269465 1 NC_016627.1 PFAM: ADP-ribosylglycohydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; ADP-ribosylglycohydrolase 269465 11560251 Clocl_0258 Clostridium clariflavum DSM 19732 ADP-ribosylglycohydrolase YP_005044923.1 268563 D 720554 CDS YP_005044924.1 374294733 11560252 269479..270060 1 NC_016627.1 hypothetical protein 270060 11560252 Clocl_0259 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044924.1 269479 D 720554 CDS YP_005044925.1 374294734 11560253 270231..270968 1 NC_016627.1 PFAM: Protein of unknown function (DUF1444); hypothetical protein 270968 11560253 Clocl_0260 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044925.1 270231 D 720554 CDS YP_005044926.1 374294735 11560254 271093..271359 1 NC_016627.1 hypothetical protein 271359 11560254 Clocl_0261 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044926.1 271093 D 720554 CDS YP_005044927.1 374294736 11560255 complement(271425..271721) 1 NC_016627.1 hypothetical protein 271721 11560255 Clocl_0262 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044927.1 271425 R 720554 CDS YP_005044928.1 374294737 11560256 271919..272308 1 NC_016627.1 PFAM: Helix-turn-helix; Helix-turn-helix protein 272308 11560256 Clocl_0263 Clostridium clariflavum DSM 19732 Helix-turn-helix protein YP_005044928.1 271919 D 720554 CDS YP_005044929.1 374294738 11560257 272311..273102 1 NC_016627.1 PFAM: Domain of unknown function (DUF955); putative Zn peptidase 273102 11560257 Clocl_0264 Clostridium clariflavum DSM 19732 putative Zn peptidase YP_005044929.1 272311 D 720554 CDS YP_005044930.1 374294739 11560258 273104..273670 1 NC_016627.1 hypothetical protein 273670 11560258 Clocl_0265 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044930.1 273104 D 720554 CDS YP_005044931.1 374294740 11560259 273896..274756 1 NC_016627.1 hypothetical protein 274756 11560259 Clocl_0266 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044931.1 273896 D 720554 CDS YP_005044932.1 374294741 11560260 275025..275228 1 NC_016627.1 hypothetical protein 275228 11560260 Clocl_0267 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044932.1 275025 D 720554 CDS YP_005044933.1 374294742 11560261 complement(275460..276365) 1 NC_016627.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; site-specific recombinase XerD 276365 11560261 Clocl_0268 Clostridium clariflavum DSM 19732 site-specific recombinase XerD YP_005044933.1 275460 R 720554 CDS YP_005044934.1 374294743 11560262 276608..277519 1 NC_016627.1 hypothetical protein 277519 11560262 Clocl_0269 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044934.1 276608 D 720554 CDS YP_005044935.1 374294744 11560263 277504..280974 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; HIRAN domain; DEAD/DEAH box helicase; superfamily II helicase 280974 11560263 Clocl_0270 Clostridium clariflavum DSM 19732 superfamily II helicase YP_005044935.1 277504 D 720554 CDS YP_005044936.1 374294745 11560264 281096..281557 1 NC_016627.1 hypothetical protein 281557 11560264 Clocl_0271 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044936.1 281096 D 720554 CDS YP_005044937.1 374294746 11560265 281721..282095 1 NC_016627.1 hypothetical protein 282095 11560265 Clocl_0272 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044937.1 281721 D 720554 CDS YP_005044938.1 374294747 11560266 282109..282903 1 NC_016627.1 hypothetical protein 282903 11560266 Clocl_0273 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044938.1 282109 D 720554 CDS YP_005044939.1 374294748 11560267 282900..283769 1 NC_016627.1 hypothetical protein 283769 11560267 Clocl_0274 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044939.1 282900 D 720554 CDS YP_005044940.1 374294749 11560268 complement(283837..284028) 1 NC_016627.1 hypothetical protein 284028 11560268 Clocl_0275 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044940.1 283837 R 720554 CDS YP_005044941.1 374294750 11560269 284331..285188 1 NC_016627.1 PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal; TnsA endonuclease 285188 11560269 Clocl_0276 Clostridium clariflavum DSM 19732 TnsA endonuclease YP_005044941.1 284331 D 720554 CDS YP_005044942.1 374294751 11560270 285169..287328 1 NC_016627.1 PFAM: Integrase core domain; integrase family protein 287328 11560270 Clocl_0277 Clostridium clariflavum DSM 19732 integrase family protein YP_005044942.1 285169 D 720554 CDS YP_005044943.1 374294752 11560271 287336..288997 1 NC_016627.1 manually curated; hypothetical protein 288997 11560271 Clocl_0278 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044943.1 287336 D 720554 CDS YP_005044944.1 374294753 11560272 288991..290721 1 NC_016627.1 hypothetical protein 290721 11560272 Clocl_0279 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044944.1 288991 D 720554 CDS YP_005044945.1 374294754 11560273 291112..292806 1 NC_016627.1 PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain 292806 11560273 Clocl_0280 Clostridium clariflavum DSM 19732 putative transcriptional regulator with HTH domain YP_005044945.1 291112 D 720554 CDS YP_005044946.1 374294755 11560274 293916..294491 1 NC_016627.1 hypothetical protein 294491 11560274 Clocl_0281 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044946.1 293916 D 720554 CDS YP_005044947.1 374294756 11560275 295215..299594 1 NC_016627.1 PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; S-layer homology domain; beta-1,4-xylanase 299594 11560275 Clocl_0282 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005044947.1 295215 D 720554 CDS YP_005044948.1 374294757 11560276 299880..300248 1 NC_016627.1 PFAM: Protein of unknown function(DUF2089); hypothetical protein 300248 11560276 Clocl_0283 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044948.1 299880 D 720554 CDS YP_005044949.1 374294758 11560277 300304..301512 1 NC_016627.1 hypothetical protein 301512 11560277 Clocl_0284 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044949.1 300304 D 720554 CDS YP_005044950.1 374294759 11560278 301709..302791 1 NC_016627.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 (bRF-1) 302791 11560278 Clocl_0285 Clostridium clariflavum DSM 19732 peptide chain release factor 1 (bRF-1) YP_005044950.1 301709 D 720554 CDS YP_005044951.1 374294760 11560279 302994..303734 1 NC_016627.1 PFAM: ZIP Zinc transporter; putative divalent heavy-metal cations transporter 303734 11560279 Clocl_0286 Clostridium clariflavum DSM 19732 putative divalent heavy-metal cations transporter YP_005044951.1 302994 D 720554 CDS YP_005044952.1 374294761 11560280 303821..304876 1 NC_016627.1 PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 304876 11560280 Clocl_0287 Clostridium clariflavum DSM 19732 Sua5/YciO/YrdC/YwlC family protein YP_005044952.1 303821 D 720554 CDS YP_005044953.1 374294762 11560281 304920..305408 1 NC_016627.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase 305408 11560281 Clocl_0288 Clostridium clariflavum DSM 19732 protein-tyrosine-phosphatase YP_005044953.1 304920 D 720554 CDS YP_005044954.1 374294763 11560282 305512..305961 1 NC_016627.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose-5-phosphate isomerase 305961 11560282 Clocl_0289 Clostridium clariflavum DSM 19732 ribose-5-phosphate isomerase YP_005044954.1 305512 D 720554 CDS YP_005044955.1 374294764 11560283 305977..306606 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 306606 11560283 Clocl_0290 Clostridium clariflavum DSM 19732 uracil phosphoribosyltransferase YP_005044955.1 305977 D 720554 CDS YP_005044956.1 374294765 11560284 306692..307138 1 NC_016627.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; deoxycytidylate deaminase 307138 11560284 Clocl_0291 Clostridium clariflavum DSM 19732 deoxycytidylate deaminase YP_005044956.1 306692 D 720554 CDS YP_005044957.1 374294766 11560285 307307..308431 1 NC_016627.1 PFAM: Glycosyl transferase family 4; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 308431 11560285 Clocl_0292 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005044957.1 307307 D 720554 CDS YP_005044958.1 374294767 11560286 308494..309648 1 NC_016627.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; UDP-N-Acetylglucosamine 2-epimerase 309648 11560286 Clocl_0293 Clostridium clariflavum DSM 19732 UDP-N-Acetylglucosamine 2-epimerase YP_005044958.1 308494 D 720554 CDS YP_005044959.1 374294768 11560287 310208..310597 1 NC_016627.1 hypothetical protein 310597 11560287 Clocl_0294 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044959.1 310208 D 720554 CDS YP_005044960.1 374294769 11560288 310610..311365 1 NC_016627.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); F0F1-type ATP synthase subunit alpha 311365 11560288 Clocl_0295 Clostridium clariflavum DSM 19732 F0F1-type ATP synthase subunit alpha YP_005044960.1 310610 D 720554 CDS YP_005044961.1 374294770 11560289 311379..311597 1 NC_016627.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase F0 subcomplex subunit C 311597 11560289 Clocl_0296 Clostridium clariflavum DSM 19732 ATP synthase F0 subcomplex subunit C YP_005044961.1 311379 D 720554 CDS YP_005044962.1 374294771 11560290 311708..312196 1 NC_016627.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase F0 subcomplex subunit B 312196 11560290 Clocl_0297 Clostridium clariflavum DSM 19732 ATP synthase F0 subcomplex subunit B YP_005044962.1 311708 D 720554 CDS YP_005044963.1 374294772 11560291 312284..312820 1 NC_016627.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase F1 subcomplex subunit delta 312820 11560291 Clocl_0298 Clostridium clariflavum DSM 19732 ATP synthase F1 subcomplex subunit delta YP_005044963.1 312284 D 720554 CDS YP_005044964.1 374294773 11560292 312826..314349 1 NC_016627.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase F1 subcomplex subunit alpha 314349 11560292 Clocl_0299 Clostridium clariflavum DSM 19732 ATP synthase F1 subcomplex subunit alpha YP_005044964.1 312826 D 720554 CDS YP_005044965.1 374294774 11560293 314364..315251 1 NC_016627.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase, F1 gamma subunit 315251 11560293 Clocl_0300 Clostridium clariflavum DSM 19732 ATP synthase, F1 gamma subunit YP_005044965.1 314364 D 720554 CDS YP_005044966.1 374294775 11560294 315296..316690 1 NC_016627.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase F1 subcomplex subunit beta 316690 11560294 Clocl_0301 Clostridium clariflavum DSM 19732 ATP synthase F1 subcomplex subunit beta YP_005044966.1 315296 D 720554 CDS YP_005044967.1 374294776 11560295 316701..317108 1 NC_016627.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase, F1 epsilon subunit 317108 11560295 Clocl_0302 Clostridium clariflavum DSM 19732 ATP synthase, F1 epsilon subunit YP_005044967.1 316701 D 720554 CDS YP_005044968.1 374294777 11560296 317447..322318 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 322318 11560296 Clocl_0303 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005044968.1 317447 D 720554 CDS YP_005044969.1 374294778 11560297 322408..326241 1 NC_016627.1 hypothetical protein 326241 11560297 Clocl_0304 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044969.1 322408 D 720554 CDS YP_005044970.1 374294779 11560298 326272..327171 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 327171 11560298 Clocl_0305 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005044970.1 326272 D 720554 CDS YP_005044971.1 374294780 11560299 327387..328142 1 NC_016627.1 PFAM: Protein of unknown function (DUF1779); hypothetical protein 328142 11560299 Clocl_0306 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044971.1 327387 D 720554 CDS YP_005044972.1 374294781 11560300 328213..329484 1 NC_016627.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 329484 11560300 Clocl_0307 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005044972.1 328213 D 720554 CDS YP_005044973.1 374294782 11560301 329718..330764 1 NC_016627.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D; manually curated; stage II sporulation protein D 330764 11560301 Clocl_0308 Clostridium clariflavum DSM 19732 stage II sporulation protein D YP_005044973.1 329718 D 720554 CDS YP_005044974.1 374294783 11560302 330832..331725 1 NC_016627.1 PFAM: Peptidase family M23; metalloendopeptidase-like membrane protein 331725 11560302 Clocl_0309 Clostridium clariflavum DSM 19732 metalloendopeptidase-like membrane protein YP_005044974.1 330832 D 720554 CDS YP_005044975.1 374294784 11560303 331889..333511 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 333511 11560303 Clocl_0310 Clostridium clariflavum DSM 19732 transposase YP_005044975.1 331889 D 720554 CDS YP_005044976.1 374294785 11560304 334175..334957 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 334957 11560304 Clocl_0311 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005044976.1 334175 D 720554 CDS YP_005044977.1 374294786 11560305 complement(335015..335728) 1 NC_016627.1 PFAM: NlpC/P60 family; cell wall-associated hydrolase, invasion-associated protein 335728 11560305 Clocl_0312 Clostridium clariflavum DSM 19732 cell wall-associated hydrolase, invasion-associated protein YP_005044977.1 335015 R 720554 CDS YP_005044978.1 374294787 11560306 335973..336224 1 NC_016627.1 PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID; sporulation transcriptional regulator SpoIIID 336224 11560306 Clocl_0313 Clostridium clariflavum DSM 19732 sporulation transcriptional regulator SpoIIID YP_005044978.1 335973 D 720554 CDS YP_005044979.1 374294788 11560307 336653..337687 1 NC_016627.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB 337687 11560307 Clocl_0314 Clostridium clariflavum DSM 19732 rod shape-determining protein MreB YP_005044979.1 336653 D 720554 CDS YP_005044980.1 374294789 11560308 337826..338605 1 NC_016627.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; manually curated; flagellar hook-basal body protein 338605 11560308 Clocl_0315 Clostridium clariflavum DSM 19732 flagellar hook-basal body protein YP_005044980.1 337826 D 720554 CDS YP_005044981.1 374294790 11560309 338689..339489 1 NC_016627.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria; flagellar basal-body rod protein FlgG 339489 11560309 Clocl_0316 Clostridium clariflavum DSM 19732 flagellar basal-body rod protein FlgG YP_005044981.1 338689 D 720554 CDS YP_005044982.1 374294791 11560310 339530..339901 1 NC_016627.1 PFAM: Rod binding protein; Rod binding protein 339901 11560310 Clocl_0317 Clostridium clariflavum DSM 19732 Rod binding protein YP_005044982.1 339530 D 720554 CDS YP_005044983.1 374294792 11560311 340151..340585 1 NC_016627.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ 340585 11560311 Clocl_0318 Clostridium clariflavum DSM 19732 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ YP_005044983.1 340151 D 720554 CDS YP_005044984.1 374294793 11560312 complement(340727..342142) 1 NC_016627.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 342142 11560312 Clocl_0319 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramate--L-alanine ligase YP_005044984.1 340727 R 720554 CDS YP_005044985.1 374294794 11560313 342651..343463 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase; pur operon repressor 343463 11560313 Clocl_0320 Clostridium clariflavum DSM 19732 pur operon repressor YP_005044985.1 342651 D 720554 CDS YP_005044986.1 374294795 11560314 343775..344062 1 NC_016627.1 PFAM: SpoVG; hypothetical protein 344062 11560314 Clocl_0321 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044986.1 343775 D 720554 CDS YP_005044987.1 374294796 11560315 344531..345910 1 NC_016627.1 PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 345910 11560315 Clocl_0322 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_005044987.1 344531 D 720554 CDS YP_005044988.1 374294797 11560316 346222..347190 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 347190 11560316 Clocl_0323 Clostridium clariflavum DSM 19732 ribose-phosphate pyrophosphokinase YP_005044988.1 346222 D 720554 CDS YP_005044989.1 374294798 11560317 347346..347957 1 NC_016627.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 347957 11560317 Clocl_0324 Clostridium clariflavum DSM 19732 peptidyl-tRNA hydrolase YP_005044989.1 347346 D 720554 CDS YP_005044990.1 374294799 11560318 347967..351500 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor Mfd 351500 11560318 Clocl_0325 Clostridium clariflavum DSM 19732 transcription-repair coupling factor Mfd YP_005044990.1 347967 D 720554 CDS YP_005044991.1 374294800 11560319 351699..352775 1 NC_016627.1 PFAM: PPIC-type PPIASE domain; PPIC-type PPIASE family protein 352775 11560319 Clocl_0326 Clostridium clariflavum DSM 19732 PPIC-type PPIASE family protein YP_005044991.1 351699 D 720554 CDS YP_005044992.1 374294801 11560320 352975..353529 1 NC_016627.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T; stage V sporulation protein T 353529 11560320 Clocl_0327 Clostridium clariflavum DSM 19732 stage V sporulation protein T YP_005044992.1 352975 D 720554 CDS YP_005044993.1 374294802 11560321 complement(353635..354006) 1 NC_016627.1 PFAM: L,D-transpeptidase catalytic domain; hypothetical protein 354006 11560321 Clocl_0328 Clostridium clariflavum DSM 19732 hypothetical protein YP_005044993.1 353635 R 720554 CDS YP_005044994.1 374294803 11560322 354431..355231 1 NC_016627.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; MazG family protein 355231 11560322 Clocl_0329 Clostridium clariflavum DSM 19732 MazG family protein YP_005044994.1 354431 D 720554 CDS YP_005044995.1 374294804 11560323 355379..355657 1 NC_016627.1 PFAM: Bacterial DNA-binding protein; nucleoid DNA-binding protein 355657 11560323 Clocl_0330 Clostridium clariflavum DSM 19732 nucleoid DNA-binding protein YP_005044995.1 355379 D 720554 CDS YP_005044996.1 374294805 11560324 355910..356149 1 NC_016627.1 PFAM: S4 domain; ribosome-associated heat shock protein 356149 11560324 Clocl_0331 Clostridium clariflavum DSM 19732 ribosome-associated heat shock protein YP_005044996.1 355910 D 720554 CDS YP_005044997.1 374294806 11560325 356444..356737 1 NC_016627.1 PFAM: YabP family; TIGRFAM: sporulation protein YabP; sporulation protein YabP 356737 11560325 Clocl_0332 Clostridium clariflavum DSM 19732 sporulation protein YabP YP_005044997.1 356444 D 720554 CDS YP_005044998.1 374294807 11560326 356960..357469 1 NC_016627.1 PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ; Spore cortex protein YabQ (Spore_YabQ) 357469 11560326 Clocl_0333 Clostridium clariflavum DSM 19732 Spore cortex protein YabQ (Spore_YabQ) YP_005044998.1 356960 D 720554 CDS YP_005044999.1 374294808 11560327 357650..357928 1 NC_016627.1 PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL; septum formation initiator 357928 11560327 Clocl_0334 Clostridium clariflavum DSM 19732 septum formation initiator YP_005044999.1 357650 D 720554 CDS YP_005045000.1 374294809 11560328 358019..358447 1 NC_016627.1 PFAM: S1 RNA binding domain; putative RNA-binding protein with ribosomal protein S1 domain 358447 11560328 Clocl_0335 Clostridium clariflavum DSM 19732 putative RNA-binding protein with ribosomal protein S1 domain YP_005045000.1 358019 D 720554 CDS YP_005045001.1 374294810 11560331 359101..359556 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 359556 11560331 Clocl_0338 Clostridium clariflavum DSM 19732 transposase YP_005045001.1 359101 D 720554 CDS YP_005045002.1 374294811 11560333 complement(360339..361778) 1 NC_016627.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; Trk-type K+ transport system, membrane component 361778 11560333 Clocl_0340 Clostridium clariflavum DSM 19732 Trk-type K+ transport system, membrane component YP_005045002.1 360339 R 720554 CDS YP_005045003.1 374294812 11560334 complement(361825..363222) 1 NC_016627.1 PFAM: TrkA-N domain; TrkA-C domain; K+ transport system, NAD-binding component 363222 11560334 Clocl_0341 Clostridium clariflavum DSM 19732 K+ transport system, NAD-binding component YP_005045003.1 361825 R 720554 CDS YP_005045004.1 374294813 11560335 363602..364672 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 364672 11560335 Clocl_0342 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005045004.1 363602 D 720554 CDS YP_005045005.1 374294814 11560336 complement(365012..366229) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 366229 11560336 Clocl_0343 Clostridium clariflavum DSM 19732 transposase YP_005045005.1 365012 R 720554 CDS YP_005045006.1 374294815 11560337 366861..367214 1 NC_016627.1 PFAM: Transposase; Transposase 367214 11560337 Clocl_0344 Clostridium clariflavum DSM 19732 Transposase YP_005045006.1 366861 D 720554 CDS YP_005045007.1 374294816 11560338 367211..367564 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 367564 11560338 Clocl_0345 Clostridium clariflavum DSM 19732 transposase YP_005045007.1 367211 D 720554 CDS YP_005045008.1 374294817 11560340 369235..369519 1 NC_016627.1 hypothetical protein 369519 11560340 Clocl_0347 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045008.1 369235 D 720554 CDS YP_005045009.1 374294818 11560341 complement(369569..369670) 1 NC_016627.1 hypothetical protein 369670 11560341 Clocl_0348 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045009.1 369569 R 720554 CDS YP_005045010.1 374294819 11560343 complement(371022..373478) 1 NC_016627.1 PFAM: Cellulase (glycosyl hydrolase family 5); GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; endoglucanase 373478 11560343 Clocl_0350 Clostridium clariflavum DSM 19732 endoglucanase YP_005045010.1 371022 R 720554 CDS YP_005045011.1 374294820 11560344 373868..374728 1 NC_016627.1 hypothetical protein 374728 11560344 Clocl_0351 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045011.1 373868 D 720554 CDS YP_005045012.1 374294821 11560345 375025..375459 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 375459 11560345 Clocl_0352 Clostridium clariflavum DSM 19732 putative acetyltransferase YP_005045012.1 375025 D 720554 CDS YP_005045013.1 374294822 11560346 375647..377113 1 NC_016627.1 PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; transposase 377113 11560346 Clocl_0353 Clostridium clariflavum DSM 19732 transposase YP_005045013.1 375647 D 720554 CDS YP_005045014.1 374294823 11560347 377130..377900 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 377900 11560347 Clocl_0354 Clostridium clariflavum DSM 19732 DNA replication protein YP_005045014.1 377130 D 720554 CDS YP_005045015.1 374294824 11560348 complement(378252..379622) 1 NC_016627.1 PFAM: Dockerin type I repeat; Leucine Rich Repeat; Leucine Rich Repeat (LRR)-containing protein,dockerin-like protein 379622 11560348 Clocl_0355 Clostridium clariflavum DSM 19732 Leucine Rich Repeat (LRR)-containing protein,dockerin-like protein YP_005045015.1 378252 R 720554 CDS YP_005045016.1 374294825 11560349 complement(380198..382207) 1 NC_016627.1 PFAM: Predicted permease; putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 382207 11560349 Clocl_0356 Clostridium clariflavum DSM 19732 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component YP_005045016.1 380198 R 720554 CDS YP_005045017.1 374294826 11560350 complement(382200..382976) 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; antimicrobial peptide ABC transporter ATPase 382976 11560350 Clocl_0357 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005045017.1 382200 R 720554 CDS YP_005045018.1 374294827 11560351 complement(383150..384145) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; manually curated; signal transduction histidine kinase 384145 11560351 Clocl_0358 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045018.1 383150 R 720554 CDS YP_005045019.1 374294828 11560352 complement(384150..384818) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 384818 11560352 Clocl_0359 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005045019.1 384150 R 720554 CDS YP_005045020.1 374294829 11560353 complement(384952..386709) 1 NC_016627.1 PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease 386709 11560353 Clocl_0360 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005045020.1 384952 R 720554 CDS YP_005045021.1 374294830 11560354 complement(386711..388435) 1 NC_016627.1 PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease 388435 11560354 Clocl_0361 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005045021.1 386711 R 720554 CDS YP_005045022.1 374294831 11560355 388894..389949 1 NC_016627.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; ABC-type Co2+ transport system, permease component 389949 11560355 Clocl_0362 Clostridium clariflavum DSM 19732 ABC-type Co2+ transport system, permease component YP_005045022.1 388894 D 720554 CDS YP_005045023.1 374294832 11560356 389988..390797 1 NC_016627.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; cobalt ABC transporter permease CbiQ 390797 11560356 Clocl_0363 Clostridium clariflavum DSM 19732 cobalt ABC transporter permease CbiQ YP_005045023.1 389988 D 720554 CDS YP_005045024.1 374294833 11560357 390798..391550 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: cobalt transport protein ATP-binding subunit; cobalt ABC transporter ATPase 391550 11560357 Clocl_0364 Clostridium clariflavum DSM 19732 cobalt ABC transporter ATPase YP_005045024.1 390798 D 720554 CDS YP_005045025.1 374294834 11560358 391666..392877 1 NC_016627.1 manually curated; hypothetical protein 392877 11560358 Clocl_0365 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045025.1 391666 D 720554 CDS YP_005045026.1 374294835 11560359 393000..394184 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 394184 11560359 Clocl_0366 Clostridium clariflavum DSM 19732 peptidyl-prolyl cis-trans isomerase YP_005045026.1 393000 D 720554 CDS YP_005045027.1 374294836 11560360 394212..394838 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein 394838 11560360 Clocl_0367 Clostridium clariflavum DSM 19732 haloacid dehalogenase superfamily protein YP_005045027.1 394212 D 720554 CDS YP_005045028.1 374294837 11560361 394939..396621 1 NC_016627.1 PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; putative unusual protein kinase 396621 11560361 Clocl_0368 Clostridium clariflavum DSM 19732 putative unusual protein kinase YP_005045028.1 394939 D 720554 CDS YP_005045029.1 374294838 11560362 complement(396712..399309) 1 NC_016627.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase; plasma-membrane calcium-translocating P-type ATPase 399309 11560362 Clocl_0369 Clostridium clariflavum DSM 19732 plasma-membrane calcium-translocating P-type ATPase YP_005045029.1 396712 R 720554 CDS YP_005045030.1 374294839 11560363 399708..400271 1 NC_016627.1 PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: probable dihydroxyacetone kinase regulator; transcriptional regulator 400271 11560363 Clocl_0370 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005045030.1 399708 D 720554 CDS YP_005045031.1 374294840 11560364 400647..402119 1 NC_016627.1 PFAM: GumN protein; S-layer homology domain; hypothetical protein 402119 11560364 Clocl_0371 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045031.1 400647 D 720554 CDS YP_005045032.1 374294841 11560366 402869..405379 1 NC_016627.1 PFAM: Chagasin family peptidase inhibitor I42; putative secreted protein 405379 11560366 Clocl_0373 Clostridium clariflavum DSM 19732 putative secreted protein YP_005045032.1 402869 D 720554 CDS YP_005045033.1 374294842 11560368 405958..406896 1 NC_016627.1 PFAM: DnaJ domain; DnaJ C terminal region; DnaJ-class molecular chaperone with C-terminal Zn finger domain 406896 11560368 Clocl_0375 Clostridium clariflavum DSM 19732 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005045033.1 405958 D 720554 CDS YP_005045034.1 374294843 11560369 406949..409543 1 NC_016627.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone ClpB 409543 11560369 Clocl_0376 Clostridium clariflavum DSM 19732 ATP-dependent chaperone ClpB YP_005045034.1 406949 D 720554 CDS YP_005045035.1 374294844 11560370 409847..410665 1 NC_016627.1 PFAM: DNA methylase; manually curated; DNA modification methylase 410665 11560370 Clocl_0377 Clostridium clariflavum DSM 19732 DNA modification methylase YP_005045035.1 409847 D 720554 CDS YP_005045036.1 374294845 11560371 410698..411885 1 NC_016627.1 PFAM: Domain of unknown function (DUF362); hypothetical protein 411885 11560371 Clocl_0378 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045036.1 410698 D 720554 CDS YP_005045037.1 374294846 11560375 413027..415423 1 NC_016627.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E; stage II sporulation protein E 415423 11560375 Clocl_0382 Clostridium clariflavum DSM 19732 stage II sporulation protein E YP_005045037.1 413027 D 720554 CDS YP_005045038.1 374294847 11560376 415489..415830 1 NC_016627.1 hypothetical protein 415830 11560376 Clocl_0383 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045038.1 415489 D 720554 CDS YP_005045039.1 374294848 11560377 415987..416613 1 NC_016627.1 hypothetical protein 416613 11560377 Clocl_0384 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045039.1 415987 D 720554 CDS YP_005045040.1 374294849 11560379 417212..418939 1 NC_016627.1 PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; putative signal transduction protein with a C-terminal ATPase domain 418939 11560379 Clocl_0386 Clostridium clariflavum DSM 19732 putative signal transduction protein with a C-terminal ATPase domain YP_005045040.1 417212 D 720554 CDS YP_005045041.1 374294850 11560380 418980..420584 1 NC_016627.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; manually curated; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 420584 11560380 Clocl_0387 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005045041.1 418980 D 720554 CDS YP_005045042.1 374294851 11560381 420581..421924 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 421924 11560381 Clocl_0388 Clostridium clariflavum DSM 19732 carbohydrate ABC transporter substrate-binding protein YP_005045042.1 420581 D 720554 CDS YP_005045043.1 374294852 11560383 423592..424017 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 424017 11560383 Clocl_0390 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005045043.1 423592 D 720554 CDS YP_005045044.1 374294853 11560384 424279..425256 1 NC_016627.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA-U20-dihydrouridine synthase 425256 11560384 Clocl_0391 Clostridium clariflavum DSM 19732 tRNA-U20-dihydrouridine synthase YP_005045044.1 424279 D 720554 CDS YP_005045045.1 374294854 11560385 425400..426503 1 NC_016627.1 PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; Competence protein A/Cell division protein FtsA 426503 11560385 Clocl_0392 Clostridium clariflavum DSM 19732 Competence protein A/Cell division protein FtsA YP_005045045.1 425400 D 720554 CDS YP_005045046.1 374294855 11560386 426687..427211 1 NC_016627.1 PFAM: Thioesterase superfamily; acyl-CoA hydrolase 427211 11560386 Clocl_0393 Clostridium clariflavum DSM 19732 acyl-CoA hydrolase YP_005045046.1 426687 D 720554 CDS YP_005045047.1 374294856 11560387 complement(427308..427970) 1 NC_016627.1 PFAM: NlpC/P60 family; Putative peptidoglycan binding domain; cell wall-associated hydrolase, invasion-associated protein 427970 11560387 Clocl_0394 Clostridium clariflavum DSM 19732 cell wall-associated hydrolase, invasion-associated protein YP_005045047.1 427308 R 720554 CDS YP_005045048.1 374294857 11560388 428541..430079 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; stage V sporulation protein B 430079 11560388 Clocl_0395 Clostridium clariflavum DSM 19732 stage V sporulation protein B YP_005045048.1 428541 D 720554 CDS YP_005045049.1 374294858 11560389 430419..430874 1 NC_016627.1 PFAM: Hsp20/alpha crystallin family; molecular chaperone 430874 11560389 Clocl_0396 Clostridium clariflavum DSM 19732 molecular chaperone YP_005045049.1 430419 D 720554 CDS YP_005045050.1 374294859 11560390 431171..431347 1 NC_016627.1 hypothetical protein 431347 11560390 Clocl_0397 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045050.1 431171 D 720554 CDS YP_005045051.1 374294860 11560391 431682..432587 1 NC_016627.1 PFAM: UbiA prenyltransferase family; 4-hydroxybenzoate polyprenyltransferase 432587 11560391 Clocl_0398 Clostridium clariflavum DSM 19732 4-hydroxybenzoate polyprenyltransferase YP_005045051.1 431682 D 720554 CDS YP_005045052.1 374294861 11560392 432670..434307 1 NC_016627.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 434307 11560392 Clocl_0399 Clostridium clariflavum DSM 19732 integral membrane protein MviN YP_005045052.1 432670 D 720554 CDS YP_005045053.1 374294862 11560393 434333..434869 1 NC_016627.1 PFAM: Bacterial transferase hexapeptide (three repeats); acyltransferase family protein 434869 11560393 Clocl_0400 Clostridium clariflavum DSM 19732 acyltransferase family protein YP_005045053.1 434333 D 720554 CDS YP_005045054.1 374294863 11560394 434942..436072 1 NC_016627.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 436072 11560394 Clocl_0401 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005045054.1 434942 D 720554 CDS YP_005045055.1 374294864 11560395 436076..436582 1 NC_016627.1 hypothetical protein 436582 11560395 Clocl_0402 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045055.1 436076 D 720554 CDS YP_005045056.1 374294865 11560396 436589..438199 1 NC_016627.1 PFAM: O-Antigen ligase; Lipid A core--O-antigen ligase-like protein 438199 11560396 Clocl_0403 Clostridium clariflavum DSM 19732 Lipid A core--O-antigen ligase-like protein YP_005045056.1 436589 D 720554 CDS YP_005045057.1 374294866 11560397 438234..438917 1 NC_016627.1 manually curated; hypothetical protein 438917 11560397 Clocl_0404 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045057.1 438234 D 720554 CDS YP_005045058.1 374294867 11560398 439020..440579 1 NC_016627.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF-like protein, hydroxyethylthiazole kinase-related protein 440579 11560398 Clocl_0405 Clostridium clariflavum DSM 19732 yjeF-like protein, hydroxyethylthiazole kinase-related protein YP_005045058.1 439020 D 720554 CDS YP_005045059.1 374294868 11560399 440581..441750 1 NC_016627.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; alanine racemase 441750 11560399 Clocl_0406 Clostridium clariflavum DSM 19732 alanine racemase YP_005045059.1 440581 D 720554 CDS YP_005045060.1 374294869 11560400 442399..442677 1 NC_016627.1 PFAM: Ribbon-helix-helix protein, copG family; putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain 442677 11560400 Clocl_0407 Clostridium clariflavum DSM 19732 putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain YP_005045060.1 442399 D 720554 CDS YP_005045061.1 374294870 11560401 442677..443027 1 NC_016627.1 PFAM: PemK-like protein; growth inhibitor 443027 11560401 Clocl_0408 Clostridium clariflavum DSM 19732 growth inhibitor YP_005045061.1 442677 D 720554 CDS YP_005045062.1 374294871 11560402 443046..443663 1 NC_016627.1 hypothetical protein 443663 11560402 Clocl_0409 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045062.1 443046 D 720554 CDS YP_005045063.1 374294872 11560403 443890..444438 1 NC_016627.1 hypothetical protein 444438 11560403 Clocl_0410 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045063.1 443890 D 720554 CDS YP_005045064.1 374294873 11560404 complement(444638..445375) 1 NC_016627.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family 445375 11560404 Clocl_0411 Clostridium clariflavum DSM 19732 exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family YP_005045064.1 444638 R 720554 CDS YP_005045065.1 374294874 11560405 complement(445405..447642) 1 NC_016627.1 PFAM: Glycosyl transferases group 1; Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; polysaccharide pyruvyl transferase CsaB 447642 11560405 Clocl_0412 Clostridium clariflavum DSM 19732 polysaccharide pyruvyl transferase CsaB YP_005045065.1 445405 R 720554 CDS YP_005045066.1 374294875 11560406 447899..448804 1 NC_016627.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein 448804 11560406 Clocl_0413 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045066.1 447899 D 720554 CDS YP_005045067.1 374294876 11560407 448932..449774 1 NC_016627.1 PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 449774 11560407 Clocl_0414 Clostridium clariflavum DSM 19732 transketolase YP_005045067.1 448932 D 720554 CDS YP_005045068.1 374294877 11560408 449780..450724 1 NC_016627.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase 450724 11560408 Clocl_0415 Clostridium clariflavum DSM 19732 transketolase YP_005045068.1 449780 D 720554 CDS YP_005045069.1 374294878 11560409 complement(450998..454612) 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; Ig-like domain-containing protein,Leucine Rich Repeat (LRR)-containing protein,putative S-layer protein 454612 11560409 Clocl_0416 Clostridium clariflavum DSM 19732 Ig-like domain-containing protein,Leucine Rich Repeat (LRR)-containing protein,putative S-layer protein YP_005045069.1 450998 R 720554 CDS YP_005045070.1 374294879 11560410 complement(454897..458508) 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; hypothetical protein 458508 11560410 Clocl_0417 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045070.1 454897 R 720554 CDS YP_005045071.1 374294880 11560411 complement(458793..462551) 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; hypothetical protein 462551 11560411 Clocl_0418 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045071.1 458793 R 720554 CDS YP_005045072.1 374294881 11560412 complement(462881..466618) 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); Leucine Rich Repeat; S-layer homology domain; manually curated; hypothetical protein 466618 11560412 Clocl_0419 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045072.1 462881 R 720554 CDS YP_005045073.1 374294882 11560413 466980..468047 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 468047 11560413 Clocl_0420 Clostridium clariflavum DSM 19732 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein YP_005045073.1 466980 D 720554 CDS YP_005045074.1 374294883 11560414 468079..469317 1 NC_016627.1 PFAM: Type II/IV secretion system protein; Flp pilus assembly protein, ATPase CpaF 469317 11560414 Clocl_0421 Clostridium clariflavum DSM 19732 Flp pilus assembly protein, ATPase CpaF YP_005045074.1 468079 D 720554 CDS YP_005045075.1 374294884 11560415 469327..470193 1 NC_016627.1 hypothetical protein 470193 11560415 Clocl_0422 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045075.1 469327 D 720554 CDS YP_005045076.1 374294885 11560416 470210..471076 1 NC_016627.1 PFAM: Bacterial type II secretion system protein F domain; Flp pilus assembly protein TadC 471076 11560416 Clocl_0423 Clostridium clariflavum DSM 19732 Flp pilus assembly protein TadC YP_005045076.1 470210 D 720554 CDS YP_005045077.1 374294886 11560417 471111..471326 1 NC_016627.1 TIGRFAM: archaeal flagellin N-terminal-like domain; flagellin-like protein 471326 11560417 Clocl_0424 Clostridium clariflavum DSM 19732 flagellin-like protein YP_005045077.1 471111 D 720554 CDS YP_005045078.1 374294887 11560418 471458..472120 1 NC_016627.1 PFAM: TadE-like protein; TadE-like protein 472120 11560418 Clocl_0425 Clostridium clariflavum DSM 19732 TadE-like protein YP_005045078.1 471458 D 720554 CDS YP_005045079.1 374294888 11560419 472155..475766 1 NC_016627.1 hypothetical protein 475766 11560419 Clocl_0426 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045079.1 472155 D 720554 CDS YP_005045080.1 374294889 11560420 475783..476448 1 NC_016627.1 hypothetical protein 476448 11560420 Clocl_0427 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045080.1 475783 D 720554 CDS YP_005045081.1 374294890 11560421 476710..477378 1 NC_016627.1 hypothetical protein 477378 11560421 Clocl_0428 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045081.1 476710 D 720554 CDS YP_005045082.1 374294891 11560423 477641..478309 1 NC_016627.1 hypothetical protein 478309 11560423 Clocl_0430 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045082.1 477641 D 720554 CDS YP_005045083.1 374294892 11560424 478439..479806 1 NC_016627.1 hypothetical protein 479806 11560424 Clocl_0431 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045083.1 478439 D 720554 CDS YP_005045084.1 374294893 11560425 479830..480501 1 NC_016627.1 PFAM: Type IV leader peptidase family; Flp pilus assembly protein, protease CpaA 480501 11560425 Clocl_0432 Clostridium clariflavum DSM 19732 Flp pilus assembly protein, protease CpaA YP_005045084.1 479830 D 720554 CDS YP_005045085.1 374294894 11560426 480491..481825 1 NC_016627.1 PFAM: KWG Leptospira; KWG repeat-containing protein 481825 11560426 Clocl_0433 Clostridium clariflavum DSM 19732 KWG repeat-containing protein YP_005045085.1 480491 D 720554 CDS YP_005045086.1 374294895 11560427 481831..483264 1 NC_016627.1 PFAM: FHA domain; manually curated; FHA domain-containing protein 483264 11560427 Clocl_0434 Clostridium clariflavum DSM 19732 FHA domain-containing protein YP_005045086.1 481831 D 720554 CDS YP_005045087.1 374294896 11560428 483303..484061 1 NC_016627.1 PFAM: Protein phosphatase 2C; serine/threonine protein phosphatase 484061 11560428 Clocl_0435 Clostridium clariflavum DSM 19732 serine/threonine protein phosphatase YP_005045087.1 483303 D 720554 CDS YP_005045088.1 374294897 11560429 484076..485758 1 NC_016627.1 PFAM: Protein kinase domain; protein kinase family protein 485758 11560429 Clocl_0436 Clostridium clariflavum DSM 19732 protein kinase family protein YP_005045088.1 484076 D 720554 CDS YP_005045089.1 374294898 11560430 485781..486290 1 NC_016627.1 hypothetical protein 486290 11560430 Clocl_0437 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045089.1 485781 D 720554 CDS YP_005045090.1 374294899 11560431 486311..486766 1 NC_016627.1 manually curated; hypothetical protein 486766 11560431 Clocl_0438 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045090.1 486311 D 720554 CDS YP_005045091.1 374294900 11560432 486802..494178 1 NC_016627.1 manually curated; hypothetical protein 494178 11560432 Clocl_0439 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045091.1 486802 D 720554 CDS YP_005045092.1 374294901 11560433 494497..497058 1 NC_016627.1 hypothetical protein 497058 11560433 Clocl_0440 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045092.1 494497 D 720554 CDS YP_005045093.1 374294902 11560434 497045..497977 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 497977 11560434 Clocl_0441 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005045093.1 497045 D 720554 CDS YP_005045094.1 374294903 11560435 497967..498824 1 NC_016627.1 hypothetical protein 498824 11560435 Clocl_0442 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045094.1 497967 D 720554 CDS YP_005045095.1 374294904 11560436 498873..500618 1 NC_016627.1 hypothetical protein 500618 11560436 Clocl_0443 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045095.1 498873 D 720554 CDS YP_005045096.1 374294905 11560437 500712..501695 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 501695 11560437 Clocl_0444 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005045096.1 500712 D 720554 CDS YP_005045097.1 374294906 11560438 501704..502582 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 502582 11560438 Clocl_0445 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045097.1 501704 D 720554 CDS YP_005045098.1 374294907 11560439 502579..504399 1 NC_016627.1 PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; hypothetical protein 504399 11560439 Clocl_0446 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045098.1 502579 D 720554 CDS YP_005045099.1 374294908 11560440 504389..507202 1 NC_016627.1 PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355); membrane protein 507202 11560440 Clocl_0447 Clostridium clariflavum DSM 19732 membrane protein YP_005045099.1 504389 D 720554 CDS YP_005045100.1 374294909 11560442 508556..509785 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 509785 11560442 Clocl_0449 Clostridium clariflavum DSM 19732 transposase YP_005045100.1 508556 D 720554 CDS YP_005045101.1 374294910 11560446 complement(514669..515361) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 515361 11560446 Clocl_0453 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005045101.1 514669 R 720554 CDS YP_005045102.1 374294911 11560447 complement(515336..516808) 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 516808 11560447 Clocl_0454 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045102.1 515336 R 720554 CDS YP_005045103.1 374294912 11560448 complement(516849..517598) 1 NC_016627.1 hypothetical protein 517598 11560448 Clocl_0455 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045103.1 516849 R 720554 CDS YP_005045104.1 374294913 11560449 complement(517614..518330) 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 518330 11560449 Clocl_0456 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005045104.1 517614 R 720554 CDS YP_005045105.1 374294914 11560450 complement(518454..518987) 1 NC_016627.1 manually curated; hypothetical protein 518987 11560450 Clocl_0457 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045105.1 518454 R 720554 CDS YP_005045106.1 374294915 11560451 complement(519024..519929) 1 NC_016627.1 manually curated; hypothetical protein 519929 11560451 Clocl_0458 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045106.1 519024 R 720554 CDS YP_005045107.1 374294916 11560452 520221..520700 1 NC_016627.1 PFAM: Protein of unknown function (DUF567); hypothetical protein 520700 11560452 Clocl_0459 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045107.1 520221 D 720554 CDS YP_005045108.1 374294917 11560453 complement(520845..521264) 1 NC_016627.1 PFAM: Protein of unknown function (DUF3237); hypothetical protein 521264 11560453 Clocl_0460 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045108.1 520845 R 720554 CDS YP_005045109.1 374294918 11560454 complement(521336..522238) 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; esterase/lipase 522238 11560454 Clocl_0461 Clostridium clariflavum DSM 19732 esterase/lipase YP_005045109.1 521336 R 720554 CDS YP_005045110.1 374294919 11560455 complement(522737..523648) 1 NC_016627.1 PFAM: Peptidase family U32; collagenase-like protease 523648 11560455 Clocl_0462 Clostridium clariflavum DSM 19732 collagenase-like protease YP_005045110.1 522737 R 720554 CDS YP_005045111.1 374294920 11560456 524111..525169 1 NC_016627.1 PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 525169 11560456 Clocl_0463 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005045111.1 524111 D 720554 CDS YP_005045112.1 374294921 11560457 525282..527717 1 NC_016627.1 PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family; cellobiose phosphorylase 527717 11560457 Clocl_0464 Clostridium clariflavum DSM 19732 cellobiose phosphorylase YP_005045112.1 525282 D 720554 CDS YP_005045113.1 374294922 11560458 527856..530825 1 NC_016627.1 PFAM: Amylo-alpha-1,6-glucosidase; Glycosyltransferase family 36; cellobiose phosphorylase 530825 11560458 Clocl_0465 Clostridium clariflavum DSM 19732 cellobiose phosphorylase YP_005045113.1 527856 D 720554 CDS YP_005045114.1 374294923 11560459 complement(530916..531218) 1 NC_016627.1 hypothetical protein 531218 11560459 Clocl_0466 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045114.1 530916 R 720554 CDS YP_005045115.1 374294924 11560460 complement(531660..536813) 1 NC_016627.1 PFAM: Alpha-2-macroglobulin family; Dockerin type I repeat; Alpha-2-macroglobulin family N-terminal region; large extracellular alpha-helical protein 536813 11560460 Clocl_0467 Clostridium clariflavum DSM 19732 large extracellular alpha-helical protein YP_005045115.1 531660 R 720554 CDS YP_005045116.1 374294925 11560461 complement(537132..537578) 1 NC_016627.1 hypothetical protein 537578 11560461 Clocl_0468 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045116.1 537132 R 720554 CDS YP_005045117.1 374294926 11560462 538024..538710 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 538710 11560462 Clocl_0469 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005045117.1 538024 D 720554 CDS YP_005045118.1 374294927 11560463 538703..540109 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 540109 11560463 Clocl_0470 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045118.1 538703 D 720554 CDS YP_005045119.1 374294928 11560464 540215..541396 1 NC_016627.1 hypothetical protein 541396 11560464 Clocl_0471 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045119.1 540215 D 720554 CDS YP_005045120.1 374294929 11560465 541432..543513 1 NC_016627.1 PFAM: UvrD/REP helicase; DNA/RNA helicase 543513 11560465 Clocl_0472 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005045120.1 541432 D 720554 CDS YP_005045121.1 374294930 11560466 544492..545592 1 NC_016627.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 545592 11560466 Clocl_0473 Clostridium clariflavum DSM 19732 putative dehydrogenase YP_005045121.1 544492 D 720554 CDS YP_005045122.1 374294931 11560467 545635..546543 1 NC_016627.1 PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase 546543 11560467 Clocl_0474 Clostridium clariflavum DSM 19732 sugar phosphate isomerase/epimerase YP_005045122.1 545635 D 720554 CDS YP_005045123.1 374294932 11560468 546829..549036 1 NC_016627.1 PFAM: Bacterial regulatory proteins, lacI family; Bacterial extracellular solute-binding protein; family; transcriptional regulator 549036 11560468 Clocl_0475 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005045123.1 546829 D 720554 CDS YP_005045124.1 374294933 11560469 549088..549558 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 549558 11560469 Clocl_0476 Clostridium clariflavum DSM 19732 acetyltransferase, N-acetylglutamate synthase YP_005045124.1 549088 D 720554 CDS YP_005045125.1 374294934 11560470 549737..551254 1 NC_016627.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction system adenine methylase HsdM 551254 11560470 Clocl_0477 Clostridium clariflavum DSM 19732 type I restriction system adenine methylase HsdM YP_005045125.1 549737 D 720554 CDS YP_005045126.1 374294935 11560471 551416..552384 1 NC_016627.1 hypothetical protein 552384 11560471 Clocl_0478 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045126.1 551416 D 720554 CDS YP_005045127.1 374294936 11560472 552393..552671 1 NC_016627.1 hypothetical protein 552671 11560472 Clocl_0479 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045127.1 552393 D 720554 CDS YP_005045128.1 374294937 11560473 552634..554307 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2326); manually curated; hypothetical protein 554307 11560473 Clocl_0480 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045128.1 552634 D 720554 CDS YP_005045129.1 374294938 11560474 554328..555602 1 NC_016627.1 PFAM: Type I restriction modification DNA specificity domain; restriction endonuclease S subunit 555602 11560474 Clocl_0481 Clostridium clariflavum DSM 19732 restriction endonuclease S subunit YP_005045129.1 554328 D 720554 CDS YP_005045130.1 374294939 11560476 558774..559487 1 NC_016627.1 PFAM: Protein of unknown function DUF45; putative metal-dependent hydrolase 559487 11560476 Clocl_0483 Clostridium clariflavum DSM 19732 putative metal-dependent hydrolase YP_005045130.1 558774 D 720554 CDS YP_005045131.1 374294940 11560477 559616..560833 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 560833 11560477 Clocl_0484 Clostridium clariflavum DSM 19732 transposase YP_005045131.1 559616 D 720554 CDS YP_005045132.1 374294941 11560478 complement(561298..562311) 1 NC_016627.1 hypothetical protein 562311 11560478 Clocl_0485 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045132.1 561298 R 720554 CDS YP_005045133.1 374294942 11560479 complement(562400..563950) 1 NC_016627.1 hypothetical protein 563950 11560479 Clocl_0486 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045133.1 562400 R 720554 CDS YP_005045134.1 374294943 11560481 complement(564799..565275) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 565275 11560481 Clocl_0488 Clostridium clariflavum DSM 19732 putative acetyltransferase YP_005045134.1 564799 R 720554 CDS YP_005045135.1 374294944 11560482 complement(565294..566214) 1 NC_016627.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 566214 11560482 Clocl_0489 Clostridium clariflavum DSM 19732 ornithine carbamoyltransferase YP_005045135.1 565294 R 720554 CDS YP_005045136.1 374294945 11560483 complement(566248..567444) 1 NC_016627.1 PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; acetylornithine and succinylornithine aminotransferases; acetylornithine aminotransferase 567444 11560483 Clocl_0490 Clostridium clariflavum DSM 19732 acetylornithine aminotransferase YP_005045136.1 566248 R 720554 CDS YP_005045137.1 374294946 11560484 complement(567674..568339) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 568339 11560484 Clocl_0491 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005045137.1 567674 R 720554 CDS YP_005045138.1 374294947 11560485 complement(568690..569604) 1 NC_016627.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; N-acetylglutamate kinase 569604 11560485 Clocl_0492 Clostridium clariflavum DSM 19732 N-acetylglutamate kinase YP_005045138.1 568690 R 720554 CDS YP_005045139.1 374294948 11560486 complement(569779..570819) 1 NC_016627.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 570819 11560486 Clocl_0493 Clostridium clariflavum DSM 19732 N-acetyl-gamma-glutamyl-phosphate reductase YP_005045139.1 569779 R 720554 CDS YP_005045140.1 374294949 11560487 571438..572550 1 NC_016627.1 PFAM: ABC transporter; TOBE domain; sugar ABC transporter ATP-binding protein 572550 11560487 Clocl_0494 Clostridium clariflavum DSM 19732 sugar ABC transporter ATP-binding protein YP_005045140.1 571438 D 720554 CDS YP_005045141.1 374294950 11560488 572778..573860 1 NC_016627.1 sugar diacid utilization regulator 573860 11560488 Clocl_0495 Clostridium clariflavum DSM 19732 sugar diacid utilization regulator YP_005045141.1 572778 D 720554 CDS YP_005045142.1 374294951 11560489 573971..574678 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; cell division ATP-binding protein FtsE 574678 11560489 Clocl_0496 Clostridium clariflavum DSM 19732 cell division ATP-binding protein FtsE YP_005045142.1 573971 D 720554 CDS YP_005045143.1 374294952 11560490 574647..575531 1 NC_016627.1 PFAM: Predicted permease; cell division protein 575531 11560490 Clocl_0497 Clostridium clariflavum DSM 19732 cell division protein YP_005045143.1 574647 D 720554 CDS YP_005045144.1 374294953 11560491 575646..576773 1 NC_016627.1 PFAM: Peptidase family M23; manually curated; metalloendopeptidase-like membrane protein 576773 11560491 Clocl_0498 Clostridium clariflavum DSM 19732 metalloendopeptidase-like membrane protein YP_005045144.1 575646 D 720554 CDS YP_005045145.1 374294954 11560492 577084..578367 1 NC_016627.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); C-terminal processing peptidase 578367 11560492 Clocl_0499 Clostridium clariflavum DSM 19732 C-terminal processing peptidase YP_005045145.1 577084 D 720554 CDS YP_005045146.1 374294955 11560493 578513..578680 1 NC_016627.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 578680 11560493 Clocl_0500 Clostridium clariflavum DSM 19732 small, acid-soluble spore protein, alpha/beta type YP_005045146.1 578513 D 720554 CDS YP_005045147.1 374294956 11560494 578922..579677 1 NC_016627.1 PFAM: Methyltransferase domain; methyltransferase family protein 579677 11560494 Clocl_0501 Clostridium clariflavum DSM 19732 methyltransferase family protein YP_005045147.1 578922 D 720554 CDS YP_005045148.1 374294957 11560495 579840..580040 1 NC_016627.1 PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 580040 11560495 Clocl_0502 Clostridium clariflavum DSM 19732 cold shock protein YP_005045148.1 579840 D 720554 CDS YP_005045149.1 374294958 11560496 580362..581240 1 NC_016627.1 PFAM: Hsp33 protein; disulfide bond chaperone 581240 11560496 Clocl_0503 Clostridium clariflavum DSM 19732 disulfide bond chaperone YP_005045149.1 580362 D 720554 CDS YP_005045150.1 374294959 11560502 582243..583304 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 583304 11560502 Clocl_0509 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005045150.1 582243 D 720554 CDS YP_005045151.1 374294960 11560503 583529..585301 1 NC_016627.1 hypothetical protein 585301 11560503 Clocl_0510 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045151.1 583529 D 720554 CDS YP_005045152.1 374294961 11560504 585508..586428 1 NC_016627.1 PFAM: Protein of unknown function (DUF2935); hypothetical protein 586428 11560504 Clocl_0511 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045152.1 585508 D 720554 CDS YP_005045153.1 374294962 11560505 586483..586608 1 NC_016627.1 hypothetical protein 586608 11560505 Clocl_0512 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045153.1 586483 D 720554 CDS YP_005045154.1 374294963 11560506 586663..587727 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein; sulfate/thiosulfate-binding protein 587727 11560506 Clocl_0513 Clostridium clariflavum DSM 19732 sulfate/thiosulfate-binding protein YP_005045154.1 586663 D 720554 CDS YP_005045155.1 374294964 11560507 587727..588572 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT; sulfate ABC transporter, permease protein CysT 588572 11560507 Clocl_0514 Clostridium clariflavum DSM 19732 sulfate ABC transporter, permease protein CysT YP_005045155.1 587727 D 720554 CDS YP_005045156.1 374294965 11560508 588590..589471 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysW 589471 11560508 Clocl_0515 Clostridium clariflavum DSM 19732 sulfate ABC transporter, permease protein CysW YP_005045156.1 588590 D 720554 CDS YP_005045157.1 374294966 11560509 589595..590668 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein; sulfate ABC transporter ATP-binding protein 590668 11560509 Clocl_0516 Clostridium clariflavum DSM 19732 sulfate ABC transporter ATP-binding protein YP_005045157.1 589595 D 720554 CDS YP_005045158.1 374294967 11560510 complement(590834..590971) 1 NC_016627.1 hypothetical protein 590971 11560510 Clocl_0517 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045158.1 590834 R 720554 CDS YP_005045159.1 374294968 11560511 591268..591921 1 NC_016627.1 PFAM: Putative Phosphatase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase 591921 11560511 Clocl_0518 Clostridium clariflavum DSM 19732 haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_005045159.1 591268 D 720554 CDS YP_005045160.1 374294969 11560512 591918..592988 1 NC_016627.1 PFAM: 3-dehydroquinate synthase; glycerol dehydrogenase 592988 11560512 Clocl_0519 Clostridium clariflavum DSM 19732 glycerol dehydrogenase YP_005045160.1 591918 D 720554 CDS YP_005045161.1 374294970 11560513 593112..595025 1 NC_016627.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; carbon-monoxide dehydrogenase, catalytic subunit 595025 11560513 Clocl_0520 Clostridium clariflavum DSM 19732 carbon-monoxide dehydrogenase, catalytic subunit YP_005045161.1 593112 D 720554 CDS YP_005045162.1 374294971 11560514 complement(595207..595428) 1 NC_016627.1 manually curated; hypothetical protein 595428 11560514 Clocl_0521 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045162.1 595207 R 720554 CDS YP_005045163.1 374294972 11560515 595719..596651 1 NC_016627.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 596651 11560515 Clocl_0522 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005045163.1 595719 D 720554 CDS YP_005045164.1 374294973 11560516 596712..597581 1 NC_016627.1 hypothetical protein 597581 11560516 Clocl_0523 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045164.1 596712 D 720554 CDS YP_005045165.1 374294974 11560517 597864..599507 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 599507 11560517 Clocl_0524 Clostridium clariflavum DSM 19732 oligopeptide ABC transporter periplasmic protein YP_005045165.1 597864 D 720554 CDS YP_005045166.1 374294975 11560518 complement(599555..601261) 1 NC_016627.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; histidine kinase,GAF domain-containing protein 601261 11560518 Clocl_0525 Clostridium clariflavum DSM 19732 histidine kinase,GAF domain-containing protein YP_005045166.1 599555 R 720554 CDS YP_005045167.1 374294976 11560519 601548..602039 1 NC_016627.1 manually curated; hypothetical protein 602039 11560519 Clocl_0526 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045167.1 601548 D 720554 CDS YP_005045168.1 374294977 11560520 602161..602880 1 NC_016627.1 PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; N-acetylmuramoyl-L-alanine amidase CwlD 602880 11560520 Clocl_0527 Clostridium clariflavum DSM 19732 N-acetylmuramoyl-L-alanine amidase CwlD YP_005045168.1 602161 D 720554 CDS YP_005045169.1 374294978 11560521 603027..604538 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Bacterial SH3 domain; LysM domain; copper amine oxidase family protein,LysM domain-containing protein,SH3 domain-containing protein 604538 11560521 Clocl_0528 Clostridium clariflavum DSM 19732 copper amine oxidase family protein,LysM domain-containing protein,SH3 domain-containing protein YP_005045169.1 603027 D 720554 CDS YP_005045170.1 374294979 11560522 complement(604614..605033) 1 NC_016627.1 PFAM: Leucine Rich Repeat; Leucine Rich Repeat (LRR)-containing protein 605033 11560522 Clocl_0529 Clostridium clariflavum DSM 19732 Leucine Rich Repeat (LRR)-containing protein YP_005045170.1 604614 R 720554 CDS YP_005045171.1 374294980 11560524 complement(606206..606499) 1 NC_016627.1 PFAM: Transposase; transposase 606499 11560524 Clocl_0531 Clostridium clariflavum DSM 19732 transposase YP_005045171.1 606206 R 720554 CDS YP_005045172.1 374294981 11560525 complement(606903..607355) 1 NC_016627.1 hypothetical protein 607355 11560525 Clocl_0532 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045172.1 606903 R 720554 CDS YP_005045173.1 374294982 11560526 complement(607829..609340) 1 NC_016627.1 PFAM: Glycosyl hydrolases family 18; Bacterial SH3 domain; LysM domain; putative glycosyl hydrolase 609340 11560526 Clocl_0533 Clostridium clariflavum DSM 19732 putative glycosyl hydrolase YP_005045173.1 607829 R 720554 CDS YP_005045174.1 374294983 11560527 complement(609594..610238) 1 NC_016627.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus; AT-rich DNA-binding protein 610238 11560527 Clocl_0534 Clostridium clariflavum DSM 19732 AT-rich DNA-binding protein YP_005045174.1 609594 R 720554 CDS YP_005045175.1 374294984 11560528 610506..612422 1 NC_016627.1 PFAM: ABC transporter; ABC transporter ATPase 612422 11560528 Clocl_0535 Clostridium clariflavum DSM 19732 ABC transporter ATPase YP_005045175.1 610506 D 720554 CDS YP_005045176.1 374294985 11560529 613511..613804 1 NC_016627.1 PFAM: Transposase; transposase 613804 11560529 Clocl_0537 Clostridium clariflavum DSM 19732 transposase YP_005045176.1 613511 D 720554 CDS YP_005045177.1 374294986 11560530 613764..614663 1 NC_016627.1 PFAM: Integrase core domain; transposase 614663 11560530 Clocl_0538 Clostridium clariflavum DSM 19732 transposase YP_005045177.1 613764 D 720554 CDS YP_005045178.1 374294987 11560531 complement(615515..616612) 1 NC_016627.1 PFAM: Prephenate dehydrogenase; ACT domain; prephenate dehydrogenase 616612 11560531 Clocl_0539 Clostridium clariflavum DSM 19732 prephenate dehydrogenase YP_005045178.1 615515 R 720554 CDS YP_005045179.1 374294988 11560532 complement(616602..617627) 1 NC_016627.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 617627 11560532 Clocl_0540 Clostridium clariflavum DSM 19732 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_005045179.1 616602 R 720554 CDS YP_005045180.1 374294989 11560533 618497..620584 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor EF-G 620584 11560533 Clocl_0541 Clostridium clariflavum DSM 19732 translation elongation factor EF-G YP_005045180.1 618497 D 720554 CDS YP_005045181.1 374294990 11560534 620615..620755 1 NC_016627.1 hypothetical protein 620755 11560534 Clocl_0542 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045181.1 620615 D 720554 CDS YP_005045182.1 374294991 11560535 620742..621440 1 NC_016627.1 PFAM: Protein of unknown function (DUF1624); hypothetical protein 621440 11560535 Clocl_0543 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045182.1 620742 D 720554 CDS YP_005045183.1 374294992 11560536 621850..622311 1 NC_016627.1 PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR); transcriptional repressor of class III stress genes 622311 11560536 Clocl_0544 Clostridium clariflavum DSM 19732 transcriptional repressor of class III stress genes YP_005045183.1 621850 D 720554 CDS YP_005045184.1 374294993 11560537 622575..623072 1 NC_016627.1 PFAM: UvrB/uvrC motif; hypothetical protein 623072 11560537 Clocl_0545 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045184.1 622575 D 720554 CDS YP_005045185.1 374294994 11560538 623103..624131 1 NC_016627.1 PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain; arginine kinase 624131 11560538 Clocl_0546 Clostridium clariflavum DSM 19732 arginine kinase YP_005045185.1 623103 D 720554 CDS YP_005045186.1 374294995 11560539 624302..626734 1 NC_016627.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); chaperone ATPase 626734 11560539 Clocl_0547 Clostridium clariflavum DSM 19732 chaperone ATPase YP_005045186.1 624302 D 720554 CDS YP_005045187.1 374294996 11560543 628459..629763 1 NC_016627.1 hypothetical protein 629763 11560543 Clocl_0551 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045187.1 628459 D 720554 CDS YP_005045188.1 374294997 11560544 629830..631137 1 NC_016627.1 putative virion core protein (lumpy skin disease virus) 631137 11560544 Clocl_0552 Clostridium clariflavum DSM 19732 putative virion core protein (lumpy skin disease virus) YP_005045188.1 629830 D 720554 CDS YP_005045189.1 374294998 11560546 complement(631487..633589) 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 633589 11560546 Clocl_0554 Clostridium clariflavum DSM 19732 transglutaminase YP_005045189.1 631487 R 720554 CDS YP_005045190.1 374294999 11560547 complement(633590..634807) 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 634807 11560547 Clocl_0555 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045190.1 633590 R 720554 CDS YP_005045191.1 374295000 11560548 complement(634831..635766) 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 635766 11560548 Clocl_0556 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005045191.1 634831 R 720554 CDS YP_005045192.1 374295001 11560549 636475..636765 1 NC_016627.1 hypothetical protein 636765 11560549 Clocl_0557 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045192.1 636475 D 720554 CDS YP_005045193.1 374295002 11560550 complement(636900..637379) 1 NC_016627.1 hypothetical protein 637379 11560550 Clocl_0558 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045193.1 636900 R 720554 CDS YP_005045194.1 374295003 11560551 complement(637828..638898) 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 638898 11560551 Clocl_0559 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005045194.1 637828 R 720554 CDS YP_005045195.1 374295004 11560552 639021..641186 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 641186 11560552 Clocl_0560 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045195.1 639021 D 720554 CDS YP_005045196.1 374295005 11560553 641281..641898 1 NC_016627.1 PFAM: DUF218 domain; hypothetical protein 641898 11560553 Clocl_0561 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045196.1 641281 D 720554 CDS YP_005045197.1 374295006 11560554 complement(641983..643239) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 643239 11560554 Clocl_0562 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005045197.1 641983 R 720554 CDS YP_005045198.1 374295007 11560555 643636..645570 1 NC_016627.1 PFAM: Glycosyl hydrolases family 15; TIGRFAM: oligosaccharide amylase; glycosyl hydrolase family protein 645570 11560555 Clocl_0563 Clostridium clariflavum DSM 19732 glycosyl hydrolase family protein YP_005045198.1 643636 D 720554 CDS YP_005045199.1 374295008 11560556 645604..646968 1 NC_016627.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 646968 11560556 Clocl_0564 Clostridium clariflavum DSM 19732 DNA repair protein RadA YP_005045199.1 645604 D 720554 CDS YP_005045200.1 374295009 11560557 647023..648105 1 NC_016627.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region; putative nucleic-acid-binding protein (contains the HHH domain) 648105 11560557 Clocl_0565 Clostridium clariflavum DSM 19732 putative nucleic-acid-binding protein (contains the HHH domain) YP_005045200.1 647023 D 720554 CDS YP_005045201.1 374295010 11560558 complement(648249..648644) 1 NC_016627.1 hypothetical protein 648644 11560558 Clocl_0566 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045201.1 648249 R 720554 CDS YP_005045202.1 374295011 11560559 649204..649683 1 NC_016627.1 PFAM: CarD-like/TRCF domain; CarD-like transcriptional regulator 649683 11560559 Clocl_0567 Clostridium clariflavum DSM 19732 CarD-like transcriptional regulator YP_005045202.1 649204 D 720554 CDS YP_005045203.1 374295012 11560560 649929..650642 1 NC_016627.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 650642 11560560 Clocl_0568 Clostridium clariflavum DSM 19732 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_005045203.1 649929 D 720554 CDS YP_005045204.1 374295013 11560561 650682..651413 1 NC_016627.1 PFAM: ABC transporter; ABC-type Na+ transport system, ATPase component 651413 11560561 Clocl_0569 Clostridium clariflavum DSM 19732 ABC-type Na+ transport system, ATPase component YP_005045204.1 650682 D 720554 CDS YP_005045205.1 374295014 11560562 651403..652617 1 NC_016627.1 PFAM: ABC-2 type transporter; Na+ efflux pump ABC transporter permease 652617 11560562 Clocl_0570 Clostridium clariflavum DSM 19732 Na+ efflux pump ABC transporter permease YP_005045205.1 651403 D 720554 CDS YP_005045206.1 374295015 11560563 652745..654550 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 654550 11560563 Clocl_0571 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045206.1 652745 D 720554 CDS YP_005045207.1 374295016 11560564 654661..656490 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 656490 11560564 Clocl_0572 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045207.1 654661 D 720554 CDS YP_005045208.1 374295017 11560565 complement(656498..656968) 1 NC_016627.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 656968 11560565 Clocl_0573 Clostridium clariflavum DSM 19732 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005045208.1 656498 R 720554 CDS YP_005045209.1 374295018 11560566 657271..658107 1 NC_016627.1 PFAM: Cysteine-rich secretory protein family; Bacterial SH3 domain; TIGRFAM: uncharacterized protein, YkwD family; hypothetical protein 658107 11560566 Clocl_0574 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045209.1 657271 D 720554 CDS YP_005045210.1 374295019 11560567 658694..660094 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; manually curated; putative efflux protein, MATE family 660094 11560567 Clocl_0575 Clostridium clariflavum DSM 19732 putative efflux protein, MATE family YP_005045210.1 658694 D 720554 CDS YP_005045211.1 374295020 11560568 660307..661236 1 NC_016627.1 PFAM: Thymidylate synthase; thymidylate synthase 661236 11560568 Clocl_0576 Clostridium clariflavum DSM 19732 thymidylate synthase YP_005045211.1 660307 D 720554 CDS YP_005045212.1 374295021 11560569 661248..661778 1 NC_016627.1 PFAM: Protein of unknown function DUF84; hypothetical protein 661778 11560569 Clocl_0577 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045212.1 661248 D 720554 CDS YP_005045213.1 374295022 11560570 661807..662337 1 NC_016627.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; hypothetical protein 662337 11560570 Clocl_0578 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045213.1 661807 D 720554 CDS YP_005045214.1 374295023 11560571 662334..663548 1 NC_016627.1 PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 663548 11560571 Clocl_0579 Clostridium clariflavum DSM 19732 penicillin-binding protein, beta-lactamase class C YP_005045214.1 662334 D 720554 CDS YP_005045215.1 374295024 11560572 663606..665792 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC; subfamily IIIC HAD-superfamily phosphatase 665792 11560572 Clocl_0580 Clostridium clariflavum DSM 19732 subfamily IIIC HAD-superfamily phosphatase YP_005045215.1 663606 D 720554 CDS YP_005045216.1 374295025 11560573 665817..668702 1 NC_016627.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Condensation domain; manually curated; non-ribosomal peptide synthase 668702 11560573 Clocl_0581 Clostridium clariflavum DSM 19732 non-ribosomal peptide synthase YP_005045216.1 665817 D 720554 CDS YP_005045217.1 374295026 11560574 668982..670475 1 NC_016627.1 PFAM: Integrase core domain; transposase 670475 11560574 Clocl_0582 Clostridium clariflavum DSM 19732 transposase YP_005045217.1 668982 D 720554 CDS YP_005045218.1 374295027 11560576 complement(671622..672593) 1 NC_016627.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; manually curated; RluA family pseudouridine synthase 672593 11560576 Clocl_0584 Clostridium clariflavum DSM 19732 RluA family pseudouridine synthase YP_005045218.1 671622 R 720554 CDS YP_005045219.1 374295028 11560577 complement(672639..675083) 1 NC_016627.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 675083 11560577 Clocl_0585 Clostridium clariflavum DSM 19732 Nucleoside-diphosphate-sugar pyrophosphorylase family protein YP_005045219.1 672639 R 720554 CDS YP_005045220.1 374295029 11560578 675803..676882 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; putative peptidoglycan-binding domain-containing protein 676882 11560578 Clocl_0586 Clostridium clariflavum DSM 19732 putative peptidoglycan-binding domain-containing protein YP_005045220.1 675803 D 720554 CDS YP_005045221.1 374295030 11560579 677106..679088 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; D-alanyl-D-alanine carboxypeptidase; beta-lactamase class A 679088 11560579 Clocl_0587 Clostridium clariflavum DSM 19732 beta-lactamase class A YP_005045221.1 677106 D 720554 CDS YP_005045222.1 374295031 11560580 679224..679607 1 NC_016627.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease L-PSP 679607 11560580 Clocl_0588 Clostridium clariflavum DSM 19732 endoribonuclease L-PSP YP_005045222.1 679224 D 720554 CDS YP_005045223.1 374295032 11560581 679642..680871 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NAD(P)H-nitrite reductase 680871 11560581 Clocl_0589 Clostridium clariflavum DSM 19732 NAD(P)H-nitrite reductase YP_005045223.1 679642 D 720554 CDS YP_005045224.1 374295033 11560582 680887..681624 1 NC_016627.1 PFAM: Methyltransferase domain; methyltransferase family protein 681624 11560582 Clocl_0590 Clostridium clariflavum DSM 19732 methyltransferase family protein YP_005045224.1 680887 D 720554 CDS YP_005045225.1 374295034 11560583 681946..682911 1 NC_016627.1 PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE; UV-damage endonuclease 682911 11560583 Clocl_0591 Clostridium clariflavum DSM 19732 UV-damage endonuclease YP_005045225.1 681946 D 720554 CDS YP_005045226.1 374295035 11560584 682962..683129 1 NC_016627.1 hypothetical protein 683129 11560584 Clocl_0592 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045226.1 682962 D 720554 CDS YP_005045227.1 374295036 11560585 683291..683491 1 NC_016627.1 hypothetical protein 683491 11560585 Clocl_0593 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045227.1 683291 D 720554 CDS YP_005045228.1 374295037 11560586 683625..684554 1 NC_016627.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: tagatose-6-phosphate kinase; 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family; 1-phosphofructokinase 684554 11560586 Clocl_0594 Clostridium clariflavum DSM 19732 1-phosphofructokinase YP_005045228.1 683625 D 720554 CDS YP_005045229.1 374295038 11560587 complement(684693..685739) 1 NC_016627.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 685739 11560587 Clocl_0595 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005045229.1 684693 R 720554 CDS YP_005045230.1 374295039 11560588 686213..688366 1 NC_016627.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; transcriptional accessory protein 688366 11560588 Clocl_0596 Clostridium clariflavum DSM 19732 transcriptional accessory protein YP_005045230.1 686213 D 720554 CDS YP_005045231.1 374295040 11560589 688370..689254 1 NC_016627.1 manually curated; hypothetical protein 689254 11560589 Clocl_0597 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045231.1 688370 D 720554 CDS YP_005045232.1 374295041 11560590 complement(689406..690104) 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; Cell Wall Hydrolase; TIGRFAM: spore cortex-lytic enzyme; spore cortex-lytic protein 690104 11560590 Clocl_0598 Clostridium clariflavum DSM 19732 spore cortex-lytic protein YP_005045232.1 689406 R 720554 CDS YP_005045233.1 374295042 11560591 complement(690211..690549) 1 NC_016627.1 hypothetical protein 690549 11560591 Clocl_0599 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045233.1 690211 R 720554 CDS YP_005045234.1 374295043 11560592 complement(690546..690974) 1 NC_016627.1 hypothetical protein 690974 11560592 Clocl_0600 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045234.1 690546 R 720554 CDS YP_005045235.1 374295044 11560593 complement(690998..691324) 1 NC_016627.1 hypothetical protein 691324 11560593 Clocl_0601 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045235.1 690998 R 720554 CDS YP_005045236.1 374295045 11560594 complement(691533..691733) 1 NC_016627.1 hypothetical protein 691733 11560594 Clocl_0602 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045236.1 691533 R 720554 CDS YP_005045237.1 374295046 11560595 692275..692943 1 NC_016627.1 PFAM: Cytochrome C biogenesis protein transmembrane region; cytochrome c biogenesis protein 692943 11560595 Clocl_0603 Clostridium clariflavum DSM 19732 cytochrome c biogenesis protein YP_005045237.1 692275 D 720554 CDS YP_005045238.1 374295047 11560596 692991..693590 1 NC_016627.1 PFAM: AhpC/TSA family; peroxiredoxin 693590 11560596 Clocl_0604 Clostridium clariflavum DSM 19732 peroxiredoxin YP_005045238.1 692991 D 720554 CDS YP_005045239.1 374295048 11560597 693677..694957 1 NC_016627.1 PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin-disulfide reductase 694957 11560597 Clocl_0605 Clostridium clariflavum DSM 19732 thioredoxin-disulfide reductase YP_005045239.1 693677 D 720554 CDS YP_005045240.1 374295049 11560598 694965..695861 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 695861 11560598 Clocl_0606 Clostridium clariflavum DSM 19732 thioredoxin reductase YP_005045240.1 694965 D 720554 CDS YP_005045241.1 374295050 11560600 696566..699031 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; SirA-like protein; DsrE/DsrF-like family; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; TIGRFAM: CoA-disulfide reductase; NAD(FAD)-dependent dehydrogenase 699031 11560600 Clocl_0608 Clostridium clariflavum DSM 19732 NAD(FAD)-dependent dehydrogenase YP_005045241.1 696566 D 720554 CDS YP_005045242.1 374295051 11560601 699099..699380 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 699380 11560601 Clocl_0609 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005045242.1 699099 D 720554 CDS YP_005045243.1 374295052 11560602 699397..700086 1 NC_016627.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 700086 11560602 Clocl_0610 Clostridium clariflavum DSM 19732 deoxyribose-phosphate aldolase YP_005045243.1 699397 D 720554 CDS YP_005045244.1 374295053 11560603 700184..701029 1 NC_016627.1 PFAM: Sporulation and spore germination; sporulation/spore germination protein 701029 11560603 Clocl_0611 Clostridium clariflavum DSM 19732 sporulation/spore germination protein YP_005045244.1 700184 D 720554 CDS YP_005045245.1 374295054 11560604 701226..701768 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 701768 11560604 Clocl_0612 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005045245.1 701226 D 720554 CDS YP_005045246.1 374295055 11560983 701771..702247 1 NC_016627.1 hypothetical protein 702247 11560983 Clocl_0613 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045246.1 701771 D 720554 CDS YP_005045247.1 374295056 11560984 702255..703064 1 NC_016627.1 PFAM: TM2 domain; TM2 domain-containing protein 703064 11560984 Clocl_0614 Clostridium clariflavum DSM 19732 TM2 domain-containing protein YP_005045247.1 702255 D 720554 CDS YP_005045248.1 374295057 11560985 703094..704467 1 NC_016627.1 hypothetical protein 704467 11560985 Clocl_0615 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045248.1 703094 D 720554 CDS YP_005045249.1 374295058 11560986 704946..705116 1 NC_016627.1 hypothetical protein 705116 11560986 Clocl_0616 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045249.1 704946 D 720554 CDS YP_005045250.1 374295059 11560987 705164..706522 1 NC_016627.1 manually curated; hypothetical protein 706522 11560987 Clocl_0617 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045250.1 705164 D 720554 CDS YP_005045251.1 374295060 11560988 706889..710926 1 NC_016627.1 PFAM: S-layer homology domain; manually curated; putative S-layer protein 710926 11560988 Clocl_0618 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005045251.1 706889 D 720554 CDS YP_005045252.1 374295061 11560989 711199..712701 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF853); putative ATPase 712701 11560989 Clocl_0619 Clostridium clariflavum DSM 19732 putative ATPase YP_005045252.1 711199 D 720554 CDS YP_005045253.1 374295062 11560990 712711..713358 1 NC_016627.1 PFAM: Putative cyclase; putative metal-dependent hydrolase 713358 11560990 Clocl_0620 Clostridium clariflavum DSM 19732 putative metal-dependent hydrolase YP_005045253.1 712711 D 720554 CDS YP_005045254.1 374295063 11560992 complement(719063..719278) 1 NC_016627.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; putative regulatory protein, FmdB family 719278 11560992 Clocl_0622 Clostridium clariflavum DSM 19732 putative regulatory protein, FmdB family YP_005045254.1 719063 R 720554 CDS YP_005045255.1 374295064 11560993 719733..720848 1 NC_016627.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 720848 11560993 Clocl_0623 Clostridium clariflavum DSM 19732 D-alanine--D-alanine ligase YP_005045255.1 719733 D 720554 CDS YP_005045256.1 374295065 11560994 720937..721743 1 NC_016627.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; glutamate racemase 721743 11560994 Clocl_0624 Clostridium clariflavum DSM 19732 glutamate racemase YP_005045256.1 720937 D 720554 CDS YP_005045257.1 374295066 11560995 721924..722391 1 NC_016627.1 PFAM: Domain of unknown function (DUF1934); hypothetical protein 722391 11560995 Clocl_0625 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045257.1 721924 D 720554 CDS YP_005045258.1 374295067 11560996 722354..724048 1 NC_016627.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 724048 11560996 Clocl_0626 Clostridium clariflavum DSM 19732 arginyl-tRNA synthetase YP_005045258.1 722354 D 720554 CDS YP_005045259.1 374295068 11560997 724855..725493 1 NC_016627.1 hypothetical protein 725493 11560997 Clocl_0627 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045259.1 724855 D 720554 CDS YP_005045260.1 374295069 11560998 725664..729188 1 NC_016627.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 729188 11560998 Clocl_0628 Clostridium clariflavum DSM 19732 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_005045260.1 725664 D 720554 CDS YP_005045261.1 374295070 11560999 729403..732369 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 732369 11560999 Clocl_0629 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005045261.1 729403 D 720554 CDS YP_005045262.1 374295071 11561000 732417..733955 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 733955 11561000 Clocl_0630 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005045262.1 732417 D 720554 CDS YP_005045263.1 374295072 11561001 733983..735479 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); C-terminal processing peptidase 735479 11561001 Clocl_0631 Clostridium clariflavum DSM 19732 C-terminal processing peptidase YP_005045263.1 733983 D 720554 CDS YP_005045264.1 374295073 11561002 complement(735640..736032) 1 NC_016627.1 hypothetical protein 736032 11561002 Clocl_0632 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045264.1 735640 R 720554 CDS YP_005045265.1 374295074 11561004 738534..740144 1 NC_016627.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 740144 11561004 Clocl_0634 Clostridium clariflavum DSM 19732 CTP synthase YP_005045265.1 738534 D 720554 CDS YP_005045266.1 374295075 11561005 740343..741068 1 NC_016627.1 PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R; stage II sporulation protein R 741068 11561005 Clocl_0635 Clostridium clariflavum DSM 19732 stage II sporulation protein R YP_005045266.1 740343 D 720554 CDS YP_005045267.1 374295076 11561006 741500..742192 1 NC_016627.1 PFAM: MgtC family; hypothetical protein 742192 11561006 Clocl_0636 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045267.1 741500 D 720554 CDS YP_005045268.1 374295077 11561007 742389..743846 1 NC_016627.1 PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase 743846 11561007 Clocl_0637 Clostridium clariflavum DSM 19732 arginine/lysine/ornithine decarboxylase YP_005045268.1 742389 D 720554 CDS YP_005045269.1 374295078 11561008 744120..746834 1 NC_016627.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase; sarco/endoplasmic reticulum calcium-translocating P-type ATPase 746834 11561008 Clocl_0638 Clostridium clariflavum DSM 19732 sarco/endoplasmic reticulum calcium-translocating P-type ATPase YP_005045269.1 744120 D 720554 CDS YP_005045270.1 374295079 11561009 747156..748223 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 748223 11561009 Clocl_0639 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005045270.1 747156 D 720554 CDS YP_005045271.1 374295080 11561010 748226..748942 1 NC_016627.1 hypothetical protein 748942 11561010 Clocl_0640 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045271.1 748226 D 720554 CDS YP_005045272.1 374295081 11561011 748949..750397 1 NC_016627.1 PFAM: ABC-type uncharacterized transport system; ABC transporter 750397 11561011 Clocl_0641 Clostridium clariflavum DSM 19732 ABC transporter YP_005045272.1 748949 D 720554 CDS YP_005045273.1 374295082 11561012 750394..751788 1 NC_016627.1 hypothetical protein 751788 11561012 Clocl_0642 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045273.1 750394 D 720554 CDS YP_005045274.1 374295083 11561013 752017..753150 1 NC_016627.1 hypothetical protein 753150 11561013 Clocl_0643 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045274.1 752017 D 720554 CDS YP_005045275.1 374295084 11561014 753255..754448 1 NC_016627.1 hypothetical protein 754448 11561014 Clocl_0644 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045275.1 753255 D 720554 CDS YP_005045276.1 374295085 11561015 754554..755267 1 NC_016627.1 PFAM: Colicin V production protein; putative membrane protein, required for colicin V production 755267 11561015 Clocl_0645 Clostridium clariflavum DSM 19732 putative membrane protein, required for colicin V production YP_005045276.1 754554 D 720554 CDS YP_005045277.1 374295086 11561016 755511..757175 1 NC_016627.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 757175 11561016 Clocl_0646 Clostridium clariflavum DSM 19732 dihydroxy-acid dehydratase YP_005045277.1 755511 D 720554 CDS YP_005045278.1 374295087 11561017 757189..758856 1 NC_016627.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase, large subunit 758856 11561017 Clocl_0647 Clostridium clariflavum DSM 19732 acetolactate synthase, large subunit YP_005045278.1 757189 D 720554 CDS YP_005045279.1 374295088 11561018 759097..759246 1 NC_016627.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 759246 11561018 Clocl_0648 Clostridium clariflavum DSM 19732 50S ribosomal protein L33 YP_005045279.1 759097 D 720554 CDS YP_005045280.1 374295089 11561019 759393..759617 1 NC_016627.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; Preprotein translocase subunit SecE 759617 11561019 Clocl_0649 Clostridium clariflavum DSM 19732 Preprotein translocase subunit SecE YP_005045280.1 759393 D 720554 CDS YP_005045281.1 374295090 11561020 759671..760204 1 NC_016627.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein nusG 760204 11561020 Clocl_0650 Clostridium clariflavum DSM 19732 transcription antitermination protein nusG YP_005045281.1 759671 D 720554 CDS YP_005045282.1 374295091 11561021 760476..760901 1 NC_016627.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 760901 11561021 Clocl_0651 Clostridium clariflavum DSM 19732 50S ribosomal protein L11 YP_005045282.1 760476 D 720554 CDS YP_005045283.1 374295092 11561022 761083..761778 1 NC_016627.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 761778 11561022 Clocl_0652 Clostridium clariflavum DSM 19732 50S ribosomal protein L1 YP_005045283.1 761083 D 720554 CDS YP_005045284.1 374295093 11561023 762065..762598 1 NC_016627.1 PFAM: Ribosomal protein L10; 50S ribosomal protein L10 762598 11561023 Clocl_0653 Clostridium clariflavum DSM 19732 50S ribosomal protein L10 YP_005045284.1 762065 D 720554 CDS YP_005045285.1 374295094 11561024 762673..763059 1 NC_016627.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L12 763059 11561024 Clocl_0654 Clostridium clariflavum DSM 19732 50S ribosomal protein L12 YP_005045285.1 762673 D 720554 CDS YP_005045286.1 374295095 11561025 764058..767810 1 NC_016627.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 767810 11561025 Clocl_0655 Clostridium clariflavum DSM 19732 DNA-directed RNA polymerase subunit beta YP_005045286.1 764058 D 720554 CDS YP_005045287.1 374295096 11561026 767822..771325 1 NC_016627.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 771325 11561026 Clocl_0656 Clostridium clariflavum DSM 19732 DNA-directed RNA polymerase subunit beta' YP_005045287.1 767822 D 720554 CDS YP_005045288.1 374295097 11561027 771596..771838 1 NC_016627.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; ribosomal protein HS6-type (S12/L30/L7a) 771838 11561027 Clocl_0657 Clostridium clariflavum DSM 19732 ribosomal protein HS6-type (S12/L30/L7a) YP_005045288.1 771596 D 720554 CDS YP_005045289.1 374295098 11561028 771948..772376 1 NC_016627.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 772376 11561028 Clocl_0658 Clostridium clariflavum DSM 19732 30S ribosomal protein S12 YP_005045289.1 771948 D 720554 CDS YP_005045290.1 374295099 11561029 772547..773017 1 NC_016627.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; manually curated; 30S ribosomal protein S7 773017 11561029 Clocl_0659 Clostridium clariflavum DSM 19732 30S ribosomal protein S7 YP_005045290.1 772547 D 720554 CDS YP_005045291.1 374295100 11561030 773089..775167 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor EF-G 775167 11561030 Clocl_0660 Clostridium clariflavum DSM 19732 translation elongation factor EF-G YP_005045291.1 773089 D 720554 CDS YP_005045292.1 374295101 11561031 775296..776498 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor TU 776498 11561031 Clocl_0661 Clostridium clariflavum DSM 19732 translation elongation factor TU YP_005045292.1 775296 D 720554 CDS YP_005045293.1 374295102 11561032 776639..777193 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 777193 11561032 Clocl_0662 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005045293.1 776639 D 720554 CDS YP_005045294.1 374295103 11561033 777190..777768 1 NC_016627.1 manually curated; hypothetical protein 777768 11561033 Clocl_0663 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045294.1 777190 D 720554 CDS YP_005045295.1 374295104 11561034 777933..778205 1 NC_016627.1 hypothetical protein 778205 11561034 Clocl_0664 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045295.1 777933 D 720554 CDS YP_005045296.1 374295105 11561035 778451..779356 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; VanW like protein; putative vancomycin resistance protein 779356 11561035 Clocl_0665 Clostridium clariflavum DSM 19732 putative vancomycin resistance protein YP_005045296.1 778451 D 720554 CDS YP_005045297.1 374295106 11561036 779508..779771 1 NC_016627.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein 779771 11561036 Clocl_0666 Clostridium clariflavum DSM 19732 phosphotransferase system HPr (HPr) family protein YP_005045297.1 779508 D 720554 CDS YP_005045298.1 374295107 11561037 779778..781508 1 NC_016627.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 781508 11561037 Clocl_0667 Clostridium clariflavum DSM 19732 phosphoenolpyruvate-protein phosphotransferase YP_005045298.1 779778 D 720554 CDS YP_005045299.1 374295108 11561038 781638..783494 1 NC_016627.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; manually curated; Excinuclease ABC subunit C 783494 11561038 Clocl_0668 Clostridium clariflavum DSM 19732 Excinuclease ABC subunit C YP_005045299.1 781638 D 720554 CDS YP_005045300.1 374295109 11561039 783495..784196 1 NC_016627.1 PFAM: Calcineurin-like phosphoesterase; putative phosphohydrolase 784196 11561039 Clocl_0669 Clostridium clariflavum DSM 19732 putative phosphohydrolase YP_005045300.1 783495 D 720554 CDS YP_005045301.1 374295110 11561040 784513..785799 1 NC_016627.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; trigger factor 785799 11561040 Clocl_0670 Clostridium clariflavum DSM 19732 trigger factor YP_005045301.1 784513 D 720554 CDS YP_005045302.1 374295111 11561041 785866..786450 1 NC_016627.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 786450 11561041 Clocl_0671 Clostridium clariflavum DSM 19732 ATP-dependent Clp protease, proteolytic subunit ClpP YP_005045302.1 785866 D 720554 CDS YP_005045303.1 374295112 11561042 786464..787759 1 NC_016627.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); endopeptidase Clp ATP-binding regulatory subunit ClpX 787759 11561042 Clocl_0672 Clostridium clariflavum DSM 19732 endopeptidase Clp ATP-binding regulatory subunit ClpX YP_005045303.1 786464 D 720554 CDS YP_005045304.1 374295113 11561043 788106..788312 1 NC_016627.1 hypothetical protein 788312 11561043 Clocl_0673 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045304.1 788106 D 720554 CDS YP_005045305.1 374295114 11561044 788568..790247 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease; ATP-dependent protease LonB 790247 11561044 Clocl_0674 Clostridium clariflavum DSM 19732 ATP-dependent protease LonB YP_005045305.1 788568 D 720554 CDS YP_005045306.1 374295115 11561045 790547..791569 1 NC_016627.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; O-sialoglycoprotein endopeptidase 791569 11561045 Clocl_0675 Clostridium clariflavum DSM 19732 O-sialoglycoprotein endopeptidase YP_005045306.1 790547 D 720554 CDS YP_005045307.1 374295116 11561046 792220..793554 1 NC_016627.1 PFAM: Radical SAM superfamily; PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512); putative Fe-S oxidoreductase 793554 11561046 Clocl_0676 Clostridium clariflavum DSM 19732 putative Fe-S oxidoreductase YP_005045307.1 792220 D 720554 CDS YP_005045308.1 374295117 11561047 complement(793583..794260) 1 NC_016627.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 794260 11561047 Clocl_0677 Clostridium clariflavum DSM 19732 lytic murein transglycosylase YP_005045308.1 793583 R 720554 CDS YP_005045309.1 374295118 11561048 complement(794394..794717) 1 NC_016627.1 hypothetical protein 794717 11561048 Clocl_0678 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045309.1 794394 R 720554 CDS YP_005045310.1 374295119 11561049 794942..795406 1 NC_016627.1 PFAM: Protein of unknown function (DUF402); hypothetical protein 795406 11561049 Clocl_0679 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045310.1 794942 D 720554 CDS YP_005045311.1 374295120 11561050 795474..796310 1 NC_016627.1 PFAM: PHP domain; putative metal-dependent phosphoesterase, PHP family 796310 11561050 Clocl_0680 Clostridium clariflavum DSM 19732 putative metal-dependent phosphoesterase, PHP family YP_005045311.1 795474 D 720554 CDS YP_005045312.1 374295121 11561051 796672..797136 1 NC_016627.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 797136 11561051 Clocl_0682 Clostridium clariflavum DSM 19732 SsrA-binding protein YP_005045312.1 796672 D 720554 CDS YP_005045313.1 374295122 11561053 complement(799131..799412) 1 NC_016627.1 hypothetical protein 799412 11561053 Clocl_0684 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045313.1 799131 R 720554 CDS YP_005045314.1 374295123 11561054 complement(799409..800257) 1 NC_016627.1 hypothetical protein 800257 11561054 Clocl_0685 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045314.1 799409 R 720554 CDS YP_005045315.1 374295124 11561055 800398..800607 1 NC_016627.1 hypothetical protein 800607 11561055 Clocl_0686 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045315.1 800398 D 720554 CDS YP_005045316.1 374295125 11561056 800647..801606 1 NC_016627.1 hypothetical protein 801606 11561056 Clocl_0687 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045316.1 800647 D 720554 CDS YP_005045317.1 374295126 11561057 complement(801825..803114) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 803114 11561057 Clocl_0688 Clostridium clariflavum DSM 19732 transposase YP_005045317.1 801825 R 720554 CDS YP_005045318.1 374295127 11561058 803531..805564 1 NC_016627.1 hypothetical protein 805564 11561058 Clocl_0689 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045318.1 803531 D 720554 CDS YP_005045319.1 374295128 11561059 805564..805971 1 NC_016627.1 hypothetical protein 805971 11561059 Clocl_0690 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045319.1 805564 D 720554 CDS YP_005045320.1 374295129 11561060 805958..806440 1 NC_016627.1 hypothetical protein 806440 11561060 Clocl_0691 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045320.1 805958 D 720554 CDS YP_005045321.1 374295130 11561061 806421..807029 1 NC_016627.1 hypothetical protein 807029 11561061 Clocl_0692 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045321.1 806421 D 720554 CDS YP_005045322.1 374295131 11561062 807115..807897 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; DNA-directed RNA polymerase specialized sigma subunit 807897 11561062 Clocl_0693 Clostridium clariflavum DSM 19732 DNA-directed RNA polymerase specialized sigma subunit YP_005045322.1 807115 D 720554 CDS YP_005045323.1 374295132 11561063 807930..808334 1 NC_016627.1 hypothetical protein 808334 11561063 Clocl_0694 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045323.1 807930 D 720554 CDS YP_005045324.1 374295133 11561064 complement(808380..808556) 1 NC_016627.1 hypothetical protein 808556 11561064 Clocl_0695 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045324.1 808380 R 720554 CDS YP_005045325.1 374295134 11561065 complement(808572..809081) 1 NC_016627.1 hypothetical protein 809081 11561065 Clocl_0696 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045325.1 808572 R 720554 CDS YP_005045326.1 374295135 11561066 complement(809115..809483) 1 NC_016627.1 hypothetical protein 809483 11561066 Clocl_0697 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045326.1 809115 R 720554 CDS YP_005045327.1 374295136 11561067 809668..809895 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 809895 11561067 Clocl_0698 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005045327.1 809668 D 720554 CDS YP_005045328.1 374295137 11561068 809904..810080 1 NC_016627.1 hypothetical protein 810080 11561068 Clocl_0699 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045328.1 809904 D 720554 CDS YP_005045329.1 374295138 11561069 810766..811194 1 NC_016627.1 hypothetical protein 811194 11561069 Clocl_0700 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045329.1 810766 D 720554 CDS YP_005045330.1 374295139 11561070 811263..811703 1 NC_016627.1 hypothetical protein 811703 11561070 Clocl_0701 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045330.1 811263 D 720554 CDS YP_005045331.1 374295140 11561072 813236..813448 1 NC_016627.1 hypothetical protein 813448 11561072 Clocl_0703 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045331.1 813236 D 720554 CDS YP_005045332.1 374295141 11561073 813928..814221 1 NC_016627.1 PFAM: Transposase; transposase 814221 11561073 Clocl_0704 Clostridium clariflavum DSM 19732 transposase YP_005045332.1 813928 D 720554 CDS YP_005045333.1 374295142 11561074 814181..815080 1 NC_016627.1 PFAM: Integrase core domain; transposase 815080 11561074 Clocl_0705 Clostridium clariflavum DSM 19732 transposase YP_005045333.1 814181 D 720554 CDS YP_005045334.1 374295143 11561075 815574..816257 1 NC_016627.1 hypothetical protein 816257 11561075 Clocl_0706 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045334.1 815574 D 720554 CDS YP_005045335.1 374295144 11561076 complement(816392..816706) 1 NC_016627.1 hypothetical protein 816706 11561076 Clocl_0707 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045335.1 816392 R 720554 CDS YP_005045336.1 374295145 11561077 816960..817406 1 NC_016627.1 hypothetical protein 817406 11561077 Clocl_0708 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045336.1 816960 D 720554 CDS YP_005045337.1 374295146 11561078 817796..817984 1 NC_016627.1 hypothetical protein 817984 11561078 Clocl_0709 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045337.1 817796 D 720554 CDS YP_005045338.1 374295147 11561079 complement(817962..818768) 1 NC_016627.1 PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); CBM6-containing protein,dockerin-like protein 818768 11561079 Clocl_0710 Clostridium clariflavum DSM 19732 CBM6-containing protein,dockerin-like protein YP_005045338.1 817962 R 720554 CDS YP_005045339.1 374295148 11561080 complement(818876..819640) 1 NC_016627.1 hypothetical protein 819640 11561080 Clocl_0711 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045339.1 818876 R 720554 CDS YP_005045340.1 374295149 11561082 820466..822037 1 NC_016627.1 PFAM: DnaJ domain; DnaJ-class molecular chaperone with C-terminal Zn finger domain 822037 11561082 Clocl_0713 Clostridium clariflavum DSM 19732 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005045340.1 820466 D 720554 CDS YP_005045341.1 374295150 11561083 complement(822333..823550) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 823550 11561083 Clocl_0714 Clostridium clariflavum DSM 19732 transposase YP_005045341.1 822333 R 720554 CDS YP_005045342.1 374295151 11561084 complement(823821..825179) 1 NC_016627.1 hypothetical protein 825179 11561084 Clocl_0715 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045342.1 823821 R 720554 CDS YP_005045343.1 374295152 11561085 complement(825403..826548) 1 NC_016627.1 hypothetical protein 826548 11561085 Clocl_0716 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045343.1 825403 R 720554 CDS YP_005045344.1 374295153 11561086 join(826740..827540,827540..828130) 1 NC_016627.1 PFAM: Transposase DDE domain; manually curated; transposase family protein 828130 11561086 Clocl_0717 Clostridium clariflavum DSM 19732 transposase family protein YP_005045344.1 826740 D 720554 CDS YP_005045345.1 374295154 11561087 828476..828775 1 NC_016627.1 PFAM: Protein of unknown function(DUF2089); hypothetical protein 828775 11561087 Clocl_0718 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045345.1 828476 D 720554 CDS YP_005045346.1 374295155 11561088 828779..829087 1 NC_016627.1 hypothetical protein 829087 11561088 Clocl_0719 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045346.1 828779 D 720554 CDS YP_005045347.1 374295156 11561089 829950..832292 1 NC_016627.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase class III catalytic subunit 832292 11561089 Clocl_0720 Clostridium clariflavum DSM 19732 ribonucleoside-triphosphate reductase class III catalytic subunit YP_005045347.1 829950 D 720554 CDS YP_005045348.1 374295157 11561090 832335..832853 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 832853 11561090 Clocl_0721 Clostridium clariflavum DSM 19732 anaerobic ribonucleoside-triphosphate reductase activating protein YP_005045348.1 832335 D 720554 CDS YP_005045349.1 374295158 11561091 833909..835531 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 835531 11561091 Clocl_0722 Clostridium clariflavum DSM 19732 oligopeptide ABC transporter periplasmic protein YP_005045349.1 833909 D 720554 CDS YP_005045350.1 374295159 11561092 835570..837204 1 NC_016627.1 PFAM: Histidine kinase; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; signal transduction histidine kinase 837204 11561092 Clocl_0723 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005045350.1 835570 D 720554 CDS YP_005045351.1 374295160 11561093 837179..837826 1 NC_016627.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 837826 11561093 Clocl_0724 Clostridium clariflavum DSM 19732 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005045351.1 837179 D 720554 CDS YP_005045352.1 374295161 11561095 838836..839309 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase 839309 11561095 Clocl_0726 Clostridium clariflavum DSM 19732 acetyltransferase YP_005045352.1 838836 D 720554 CDS YP_005045353.1 374295162 11561096 839450..840034 1 NC_016627.1 PFAM: Uncharacterised protein family (UPF0157); hypothetical protein 840034 11561096 Clocl_0727 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045353.1 839450 D 720554 CDS YP_005045354.1 374295163 11561097 840031..840123 1 NC_016627.1 hypothetical protein 840123 11561097 Clocl_0728 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045354.1 840031 D 720554 CDS YP_005045355.1 374295164 11561098 840132..840230 1 NC_016627.1 hypothetical protein 840230 11561098 Clocl_0729 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045355.1 840132 D 720554 CDS YP_005045356.1 374295165 11561099 840208..840420 1 NC_016627.1 hypothetical protein 840420 11561099 Clocl_0730 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045356.1 840208 D 720554 CDS YP_005045357.1 374295166 11561100 840515..840808 1 NC_016627.1 hypothetical protein 840808 11561100 Clocl_0731 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045357.1 840515 D 720554 CDS YP_005045358.1 374295167 11561102 841269..842192 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 842192 11561102 Clocl_0733 Clostridium clariflavum DSM 19732 alpha/beta hydrolase YP_005045358.1 841269 D 720554 CDS YP_005045359.1 374295168 11561103 842719..843597 1 NC_016627.1 PFAM: Bacterial transcription activator, effector binding domain; hypothetical protein 843597 11561103 Clocl_0734 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045359.1 842719 D 720554 CDS YP_005045360.1 374295169 11561105 845185..845679 1 NC_016627.1 hypothetical protein 845679 11561105 Clocl_0736 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045360.1 845185 D 720554 CDS YP_005045361.1 374295170 11561106 845766..847088 1 NC_016627.1 hypothetical protein 847088 11561106 Clocl_0737 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045361.1 845766 D 720554 CDS YP_005045362.1 374295171 11561107 847072..848124 1 NC_016627.1 hypothetical protein 848124 11561107 Clocl_0738 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045362.1 847072 D 720554 CDS YP_005045363.1 374295172 11561108 848587..850050 1 NC_016627.1 PFAM: TROVE domain; TROVE domain-containing protein 850050 11561108 Clocl_0739 Clostridium clariflavum DSM 19732 TROVE domain-containing protein YP_005045363.1 848587 D 720554 CDS YP_005045364.1 374295173 11561109 850064..851644 1 NC_016627.1 hypothetical protein 851644 11561109 Clocl_0740 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045364.1 850064 D 720554 CDS YP_005045365.1 374295174 11561110 851657..851896 1 NC_016627.1 hypothetical protein 851896 11561110 Clocl_0741 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045365.1 851657 D 720554 CDS YP_005045366.1 374295175 11561111 852290..853687 1 NC_016627.1 PFAM: Methyltransferase domain; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1; 3' terminal RNA ribose 2'-O-methyltransferase Hen1 853687 11561111 Clocl_0742 Clostridium clariflavum DSM 19732 3' terminal RNA ribose 2'-O-methyltransferase Hen1 YP_005045366.1 852290 D 720554 CDS YP_005045367.1 374295176 11561112 853684..856296 1 NC_016627.1 PFAM: Calcineurin-like phosphoesterase; Chromatin associated protein KTI12; TIGRFAM: polynucleotide kinase-phosphatase; polynucleotide 3'-phosphatase,polynucleotide 5'-hydroxyl-kinase,polynucleotide 2',3'-cyclic phosphate phosphodiesterase 856296 11561112 Clocl_0743 Clostridium clariflavum DSM 19732 polynucleotide 3'-phosphatase,polynucleotide 5'-hydroxyl-kinase,polynucleotide 2',3'-cyclic phosphate phosphodiesterase YP_005045367.1 853684 D 720554 CDS YP_005045368.1 374295177 11561113 856336..857073 1 NC_016627.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; PHP family phosphohydrolase, histidinol phosphatase 857073 11561113 Clocl_0744 Clostridium clariflavum DSM 19732 PHP family phosphohydrolase, histidinol phosphatase YP_005045368.1 856336 D 720554 CDS YP_005045369.1 374295178 11561114 complement(join(857080..857838,857838..858629)) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 858629 11561114 Clocl_0745 Clostridium clariflavum DSM 19732 transposase YP_005045369.1 857080 R 720554 CDS YP_005045370.1 374295179 11561115 858992..859630 1 NC_016627.1 hypothetical protein 859630 11561115 Clocl_0746 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045370.1 858992 D 720554 CDS YP_005045371.1 374295180 11561116 860020..860676 1 NC_016627.1 hypothetical protein 860676 11561116 Clocl_0747 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045371.1 860020 D 720554 CDS YP_005045372.1 374295181 11561117 join(860837..861628,861628..862386) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 862386 11561117 Clocl_0748 Clostridium clariflavum DSM 19732 transposase YP_005045372.1 860837 D 720554 CDS YP_005045373.1 374295182 11561118 862892..863605 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 863605 11561118 Clocl_0749 Clostridium clariflavum DSM 19732 Zn-dependent hydrolase YP_005045373.1 862892 D 720554 CDS YP_005045374.1 374295183 11561119 863739..864197 1 NC_016627.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; hypothetical protein 864197 11561119 Clocl_0750 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045374.1 863739 D 720554 CDS YP_005045375.1 374295184 11561120 864398..865225 1 NC_016627.1 PFAM: ADP-ribosylglycohydrolase; ADP-ribosylglycohydrolase 865225 11561120 Clocl_0751 Clostridium clariflavum DSM 19732 ADP-ribosylglycohydrolase YP_005045375.1 864398 D 720554 CDS YP_005045376.1 374295185 11561121 865438..866142 1 NC_016627.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 866142 11561121 Clocl_0752 Clostridium clariflavum DSM 19732 nicotinamide mononucleotide transporter PnuC YP_005045376.1 865438 D 720554 CDS YP_005045377.1 374295186 11561122 866135..867151 1 NC_016627.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain; cytidyltransferase-related enzyme 867151 11561122 Clocl_0753 Clostridium clariflavum DSM 19732 cytidyltransferase-related enzyme YP_005045377.1 866135 D 720554 CDS YP_005045378.1 374295187 11561123 complement(867312..867530) 1 NC_016627.1 PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 867530 11561123 Clocl_0754 Clostridium clariflavum DSM 19732 Peptidase propeptide domain-containing protein YP_005045378.1 867312 R 720554 CDS YP_005045379.1 374295188 11561124 867846..868544 1 NC_016627.1 PFAM: Manganese containing catalase; Mn-containing catalase 868544 11561124 Clocl_0755 Clostridium clariflavum DSM 19732 Mn-containing catalase YP_005045379.1 867846 D 720554 CDS YP_005045380.1 374295189 11561125 join(868808..872077,872079..872333) 1 NC_016627.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; manually curated; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 872333 11561125 Clocl_0756 Clostridium clariflavum DSM 19732 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_005045380.1 868808 D 720554 CDS YP_005045381.1 374295190 11561126 complement(872373..872540) 1 NC_016627.1 hypothetical protein 872540 11561126 Clocl_0757 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045381.1 872373 R 720554 CDS YP_005045382.1 374295191 11561127 872792..873757 1 NC_016627.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthase 873757 11561127 Clocl_0758 Clostridium clariflavum DSM 19732 biotin synthase YP_005045382.1 872792 D 720554 CDS YP_005045383.1 374295192 11561128 874091..874630 1 NC_016627.1 PFAM: RNA 2'-phosphotransferase, Tpt1 / KptA family; RNA:NAD 2'-phosphotransferase 874630 11561128 Clocl_0759 Clostridium clariflavum DSM 19732 RNA:NAD 2'-phosphotransferase YP_005045383.1 874091 D 720554 CDS YP_005045384.1 374295193 11561129 874781..875959 1 NC_016627.1 hypothetical protein 875959 11561129 Clocl_0760 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045384.1 874781 D 720554 CDS YP_005045385.1 374295194 11561130 876102..877325 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; putative flavoprotein 877325 11561130 Clocl_0761 Clostridium clariflavum DSM 19732 putative flavoprotein YP_005045385.1 876102 D 720554 CDS YP_005045386.1 374295195 11561131 complement(877507..878292) 1 NC_016627.1 PFAM: Putative esterase; putative esterase 878292 11561131 Clocl_0762 Clostridium clariflavum DSM 19732 putative esterase YP_005045386.1 877507 R 720554 CDS YP_005045387.1 374295196 11561132 878727..880880 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 880880 11561132 Clocl_0763 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005045387.1 878727 D 720554 CDS YP_005045388.1 374295197 11561133 881410..883563 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 883563 11561133 Clocl_0764 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005045388.1 881410 D 720554 CDS YP_005045389.1 374295198 11561134 complement(883801..885192) 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 885192 11561134 Clocl_0765 Clostridium clariflavum DSM 19732 transposase family protein YP_005045389.1 883801 R 720554 CDS YP_005045390.1 374295199 11561135 885634..886224 1 NC_016627.1 PFAM: Accessory gene regulator B; manually curated; protein possibly involved in post-translational modification of quorum-sensing peptides 886224 11561135 Clocl_0766 Clostridium clariflavum DSM 19732 protein possibly involved in post-translational modification of quorum-sensing peptides YP_005045390.1 885634 D 720554 CDS YP_005045391.1 374295200 11561136 886269..886412 1 NC_016627.1 hypothetical protein 886412 11561136 Clocl_0767 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045391.1 886269 D 720554 CDS YP_005045392.1 374295201 11561137 complement(886760..886945) 1 NC_016627.1 hypothetical protein 886945 11561137 Clocl_0768 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045392.1 886760 R 720554 CDS YP_005045393.1 374295202 11561138 887216..887911 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit; gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit 887911 11561138 Clocl_0769 Clostridium clariflavum DSM 19732 gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit YP_005045393.1 887216 D 720554 CDS YP_005045394.1 374295203 11561139 887913..888671 1 NC_016627.1 TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family; MutE/EpiE family lantibiotic protection ABC transporter permease 888671 11561139 Clocl_0770 Clostridium clariflavum DSM 19732 MutE/EpiE family lantibiotic protection ABC transporter permease YP_005045394.1 887913 D 720554 CDS YP_005045395.1 374295204 11561140 888671..889447 1 NC_016627.1 TIGRFAM: lantibiotic protection ABC transporter permease subunit, MutG family; MutG family lantibiotic protection ABC transporter permease 889447 11561140 Clocl_0771 Clostridium clariflavum DSM 19732 MutG family lantibiotic protection ABC transporter permease YP_005045395.1 888671 D 720554 CDS YP_005045396.1 374295205 11561141 889471..890163 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 890163 11561141 Clocl_0772 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005045396.1 889471 D 720554 CDS YP_005045397.1 374295206 11561142 890184..891614 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; manually curated; histidine kinase,HAMP domain-containing protein,histidine kinase 891614 11561142 Clocl_0773 Clostridium clariflavum DSM 19732 histidine kinase,HAMP domain-containing protein,histidine kinase YP_005045397.1 890184 D 720554 CDS YP_005045398.1 374295207 11561143 complement(891801..892802) 1 NC_016627.1 PFAM: Predicted nucleotidyltransferase; putative nucleotidyltransferase 892802 11561143 Clocl_0774 Clostridium clariflavum DSM 19732 putative nucleotidyltransferase YP_005045398.1 891801 R 720554 CDS YP_005045399.1 374295208 11561144 893228..894187 1 NC_016627.1 hypothetical protein 894187 11561144 Clocl_0775 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045399.1 893228 D 720554 CDS YP_005045400.1 374295209 11561145 894278..894685 1 NC_016627.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytidine deaminase 894685 11561145 Clocl_0776 Clostridium clariflavum DSM 19732 cytidine deaminase YP_005045400.1 894278 D 720554 CDS YP_005045401.1 374295210 11561146 complement(894780..895712) 1 NC_016627.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit 895712 11561146 Clocl_0777 Clostridium clariflavum DSM 19732 dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit YP_005045401.1 894780 R 720554 CDS YP_005045402.1 374295211 11561147 895991..896530 1 NC_016627.1 hypothetical protein 896530 11561147 Clocl_0778 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045402.1 895991 D 720554 CDS YP_005045403.1 374295212 11561148 complement(896655..897665) 1 NC_016627.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; uroporphyrinogen-III decarboxylase 897665 11561148 Clocl_0779 Clostridium clariflavum DSM 19732 uroporphyrinogen-III decarboxylase YP_005045403.1 896655 R 720554 CDS YP_005045404.1 374295213 11561149 898080..898718 1 NC_016627.1 PFAM: B12 binding domain; putative cobalamin binding protein 898718 11561149 Clocl_0780 Clostridium clariflavum DSM 19732 putative cobalamin binding protein YP_005045404.1 898080 D 720554 CDS YP_005045405.1 374295214 11561150 899069..900364 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; Predicted histidine kinase sensor domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 900364 11561150 Clocl_0781 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005045405.1 899069 D 720554 CDS YP_005045406.1 374295215 11561151 complement(900369..901301) 1 NC_016627.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; putative GTPase, G3E family 901301 11561151 Clocl_0782 Clostridium clariflavum DSM 19732 putative GTPase, G3E family YP_005045406.1 900369 R 720554 CDS YP_005045407.1 374295216 11561152 complement(901398..902780) 1 NC_016627.1 PFAM: Methanol-cobalamin methyltransferase B subunit; methanol:corrinoid methyltransferase 902780 11561152 Clocl_0783 Clostridium clariflavum DSM 19732 methanol:corrinoid methyltransferase YP_005045407.1 901398 R 720554 CDS YP_005045408.1 374295217 11561153 903106..903843 1 NC_016627.1 PFAM: Protein of unknown function (DUF1638); hypothetical protein 903843 11561153 Clocl_0784 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045408.1 903106 D 720554 CDS YP_005045409.1 374295218 11561154 903904..904959 1 NC_016627.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 904959 11561154 Clocl_0785 Clostridium clariflavum DSM 19732 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_005045409.1 903904 D 720554 CDS YP_005045410.1 374295219 11561155 905125..906933 1 NC_016627.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; putative metal-binding protein 906933 11561155 Clocl_0786 Clostridium clariflavum DSM 19732 putative metal-binding protein YP_005045410.1 905125 D 720554 CDS YP_005045411.1 374295220 11561156 complement(907020..908063) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, lacI family; family; manually curated; transcriptional regulator 908063 11561156 Clocl_0787 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005045411.1 907020 R 720554 CDS YP_005045412.1 374295221 11561157 complement(908131..909036) 1 NC_016627.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; sugar kinase 909036 11561157 Clocl_0788 Clostridium clariflavum DSM 19732 sugar kinase YP_005045412.1 908131 R 720554 CDS YP_005045413.1 374295222 11561158 909362..910609 1 NC_016627.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen-III decarboxylase 910609 11561158 Clocl_0789 Clostridium clariflavum DSM 19732 uroporphyrinogen-III decarboxylase YP_005045413.1 909362 D 720554 CDS YP_005045414.1 374295223 11561159 910662..911672 1 NC_016627.1 PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 911672 11561159 Clocl_0790 Clostridium clariflavum DSM 19732 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_005045414.1 910662 D 720554 CDS YP_005045415.1 374295224 11561160 911790..912770 1 NC_016627.1 PFAM: Branched-chain amino acid transport system / permease component; permease component of ribose/xylose/arabinose/galactoside ABC-type transporters 912770 11561160 Clocl_0791 Clostridium clariflavum DSM 19732 permease component of ribose/xylose/arabinose/galactoside ABC-type transporters YP_005045415.1 911790 D 720554 CDS YP_005045416.1 374295225 11561161 912789..914276 1 NC_016627.1 PFAM: ABC transporter; sugar ABC transporter ATPase 914276 11561161 Clocl_0792 Clostridium clariflavum DSM 19732 sugar ABC transporter ATPase YP_005045416.1 912789 D 720554 CDS YP_005045417.1 374295226 11561162 914361..914768 1 NC_016627.1 PFAM: RbsD / FucU transport protein family; ABC-type ribose transport system, auxiliary component 914768 11561162 Clocl_0793 Clostridium clariflavum DSM 19732 ABC-type ribose transport system, auxiliary component YP_005045417.1 914361 D 720554 CDS YP_005045418.1 374295227 11561163 915139..916194 1 NC_016627.1 hypothetical protein 916194 11561163 Clocl_0794 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045418.1 915139 D 720554 CDS YP_005045419.1 374295228 11561164 916279..917538 1 NC_016627.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen-III decarboxylase 917538 11561164 Clocl_0795 Clostridium clariflavum DSM 19732 uroporphyrinogen-III decarboxylase YP_005045419.1 916279 D 720554 CDS YP_005045420.1 374295229 11561165 918273..918425 1 NC_016627.1 hypothetical protein 918425 11561165 Clocl_0796 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045420.1 918273 D 720554 CDS YP_005045421.1 374295230 11561166 918585..919775 1 NC_016627.1 PFAM: Uncharacterized protein family UPF0027; hypothetical protein 919775 11561166 Clocl_0797 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045421.1 918585 D 720554 CDS YP_005045422.1 374295231 11561167 919789..920556 1 NC_016627.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 920556 11561167 Clocl_0798 Clostridium clariflavum DSM 19732 TatD family hydrolase YP_005045422.1 919789 D 720554 CDS YP_005045423.1 374295232 11561168 920568..921479 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; RNAse Z 921479 11561168 Clocl_0799 Clostridium clariflavum DSM 19732 RNAse Z YP_005045423.1 920568 D 720554 CDS YP_005045424.1 374295233 11561169 921899..923242 1 NC_016627.1 PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 923242 11561169 Clocl_0800 Clostridium clariflavum DSM 19732 NADPH-dependent FMN reductase YP_005045424.1 921899 D 720554 CDS YP_005045425.1 374295234 11561170 923300..924019 1 NC_016627.1 PFAM: Region found in RelA / SpoT proteins; hypothetical protein 924019 11561170 Clocl_0801 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045425.1 923300 D 720554 CDS YP_005045426.1 374295235 11561171 924178..925239 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 925239 11561171 Clocl_0802 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005045426.1 924178 D 720554 CDS YP_005045427.1 374295236 11561172 925592..927325 1 NC_016627.1 PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease 927325 11561172 Clocl_0803 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005045427.1 925592 D 720554 CDS YP_005045428.1 374295237 11561173 927327..929225 1 NC_016627.1 PFAM: ABC transporter transmembrane region; ABC transporter; multidrug ABC transporter ATPase and permease 929225 11561173 Clocl_0804 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005045428.1 927327 D 720554 CDS YP_005045429.1 374295238 11561174 complement(929412..930107) 1 NC_016627.1 PFAM: NPCBM/NEW2 domain; Copper amine oxidase N-terminal domain; manually curated; putative carbohydrate binding protein,copper amine oxidase family protein 930107 11561174 Clocl_0805 Clostridium clariflavum DSM 19732 putative carbohydrate binding protein,copper amine oxidase family protein YP_005045429.1 929412 R 720554 CDS YP_005045430.1 374295239 11561175 930367..932376 1 NC_016627.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; carbon-monoxide dehydrogenase, catalytic subunit 932376 11561175 Clocl_0806 Clostridium clariflavum DSM 19732 carbon-monoxide dehydrogenase, catalytic subunit YP_005045430.1 930367 D 720554 CDS YP_005045431.1 374295240 11561176 932386..933378 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 933378 11561176 Clocl_0807 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005045431.1 932386 D 720554 CDS YP_005045432.1 374295241 11561177 933378..934157 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 934157 11561177 Clocl_0808 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005045432.1 933378 D 720554 CDS YP_005045433.1 374295242 11561178 934159..934929 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; nitrate/sulfonate/bicarbonate ABC transporter ATPase 934929 11561178 Clocl_0809 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_005045433.1 934159 D 720554 CDS YP_005045434.1 374295243 11561179 935061..935837 1 NC_016627.1 hypothetical protein 935837 11561179 Clocl_0810 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045434.1 935061 D 720554 CDS YP_005045435.1 374295244 11561181 937071..937493 1 NC_016627.1 hypothetical protein 937493 11561181 Clocl_0812 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045435.1 937071 D 720554 CDS YP_005045436.1 374295245 11561183 938089..938889 1 NC_016627.1 hypothetical protein 938889 11561183 Clocl_0814 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045436.1 938089 D 720554 CDS YP_005045437.1 374295246 11561186 943972..944355 1 NC_016627.1 hypothetical protein 944355 11561186 Clocl_0817 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045437.1 943972 D 720554 CDS YP_005045438.1 374295247 11561187 944540..945307 1 NC_016627.1 hypothetical protein 945307 11561187 Clocl_0818 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045438.1 944540 D 720554 CDS YP_005045439.1 374295248 11561188 945581..946048 1 NC_016627.1 hypothetical protein 946048 11561188 Clocl_0819 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045439.1 945581 D 720554 CDS YP_005045440.1 374295249 11561189 946041..947159 1 NC_016627.1 hypothetical protein 947159 11561189 Clocl_0820 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045440.1 946041 D 720554 CDS YP_005045441.1 374295250 11561190 947170..949452 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); Ig-like domain-containing surface protein 949452 11561190 Clocl_0821 Clostridium clariflavum DSM 19732 Ig-like domain-containing surface protein YP_005045441.1 947170 D 720554 CDS YP_005045442.1 374295251 11561191 949780..950823 1 NC_016627.1 PFAM: Transposase domain (DUF772); transposase 950823 11561191 Clocl_0822 Clostridium clariflavum DSM 19732 transposase YP_005045442.1 949780 D 720554 CDS YP_005045443.1 374295252 11561194 952818..954035 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 954035 11561194 Clocl_0825 Clostridium clariflavum DSM 19732 transposase YP_005045443.1 952818 D 720554 CDS YP_005045444.1 374295253 11561196 complement(955108..955335) 1 NC_016627.1 PFAM: Tautomerase enzyme; 4-oxalocrotonate tautomerase 955335 11561196 Clocl_0827 Clostridium clariflavum DSM 19732 4-oxalocrotonate tautomerase YP_005045444.1 955108 R 720554 CDS YP_005045445.1 374295254 11561197 complement(955351..955908) 1 NC_016627.1 PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family; hypothetical protein 955908 11561197 Clocl_0828 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045445.1 955351 R 720554 CDS YP_005045446.1 374295255 11561198 complement(955992..957302) 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 957302 11561198 Clocl_0829 Clostridium clariflavum DSM 19732 putative efflux protein, MATE family YP_005045446.1 955992 R 720554 CDS YP_005045447.1 374295256 11561201 960162..960476 1 NC_016627.1 hypothetical protein 960476 11561201 Clocl_0832 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045447.1 960162 D 720554 CDS YP_005045448.1 374295257 11561202 960466..960897 1 NC_016627.1 hypothetical protein 960897 11561202 Clocl_0833 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045448.1 960466 D 720554 CDS YP_005045449.1 374295258 11561203 join(960887..964522,964524..966920) 1 NC_016627.1 manually curated; hypothetical protein 966920 11561203 Clocl_0834 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045449.1 960887 D 720554 CDS YP_005045450.1 374295259 11561204 966985..968247 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 968247 11561204 Clocl_0835 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045450.1 966985 D 720554 CDS YP_005045451.1 374295260 11561205 968307..968666 1 NC_016627.1 hypothetical protein 968666 11561205 Clocl_0836 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045451.1 968307 D 720554 CDS YP_005045452.1 374295261 11561206 968794..969108 1 NC_016627.1 hypothetical protein 969108 11561206 Clocl_0837 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045452.1 968794 D 720554 CDS YP_005045453.1 374295262 11561207 970112..970483 1 NC_016627.1 hypothetical protein 970483 11561207 Clocl_0838 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045453.1 970112 D 720554 CDS YP_005045454.1 374295263 11561208 970829..971065 1 NC_016627.1 hypothetical protein 971065 11561208 Clocl_0839 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045454.1 970829 D 720554 CDS YP_005045455.1 374295264 11561209 971234..971743 1 NC_016627.1 hypothetical protein 971743 11561209 Clocl_0840 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045455.1 971234 D 720554 CDS YP_005045456.1 374295265 11561212 complement(973035..973805) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 973805 11561212 Clocl_0843 Clostridium clariflavum DSM 19732 DNA replication protein YP_005045456.1 973035 R 720554 CDS YP_005045457.1 374295266 11561213 complement(join(973822..974985,974985..975287)) 1 NC_016627.1 PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; manually curated; transposase 975287 11561213 Clocl_0844 Clostridium clariflavum DSM 19732 transposase YP_005045457.1 973822 R 720554 CDS YP_005045458.1 374295267 11561214 975642..976205 1 NC_016627.1 PFAM: She9 / Mdm33 family; She9 / Mdm33 family 976205 11561214 Clocl_0845 Clostridium clariflavum DSM 19732 She9 / Mdm33 family YP_005045458.1 975642 D 720554 CDS YP_005045459.1 374295268 11561216 977547..977885 1 NC_016627.1 PFAM: HNH endonuclease; restriction endonuclease 977885 11561216 Clocl_0847 Clostridium clariflavum DSM 19732 restriction endonuclease YP_005045459.1 977547 D 720554 CDS YP_005045460.1 374295269 11561217 977908..978585 1 NC_016627.1 hypothetical protein 978585 11561217 Clocl_0848 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045460.1 977908 D 720554 CDS YP_005045461.1 374295270 11561219 980584..980766 1 NC_016627.1 hypothetical protein 980766 11561219 Clocl_0850 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045461.1 980584 D 720554 CDS YP_005045462.1 374295271 11561220 980763..980882 1 NC_016627.1 hypothetical protein 980882 11561220 Clocl_0851 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045462.1 980763 D 720554 CDS YP_005045463.1 374295272 11561222 981929..982483 1 NC_016627.1 hypothetical protein 982483 11561222 Clocl_0853 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045463.1 981929 D 720554 CDS YP_005045464.1 374295273 11561223 983241..983750 1 NC_016627.1 PFAM: SMI1 / KNR4 family; putative glucan synthasis protein 983750 11561223 Clocl_0854 Clostridium clariflavum DSM 19732 putative glucan synthasis protein YP_005045464.1 983241 D 720554 CDS YP_005045465.1 374295274 11561224 983985..985496 1 NC_016627.1 PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 985496 11561224 Clocl_0855 Clostridium clariflavum DSM 19732 tetratricopeptide repeat protein YP_005045465.1 983985 D 720554 CDS YP_005045466.1 374295275 11561225 985496..985819 1 NC_016627.1 hypothetical protein 985819 11561225 Clocl_0856 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045466.1 985496 D 720554 CDS YP_005045467.1 374295276 11561226 985837..986163 1 NC_016627.1 hypothetical protein 986163 11561226 Clocl_0857 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045467.1 985837 D 720554 CDS YP_005045468.1 374295277 11561227 986180..986479 1 NC_016627.1 hypothetical protein 986479 11561227 Clocl_0858 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045468.1 986180 D 720554 CDS YP_005045469.1 374295278 11561228 986567..987931 1 NC_016627.1 hypothetical protein 987931 11561228 Clocl_0859 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045469.1 986567 D 720554 CDS YP_005045470.1 374295279 11561229 987955..991158 1 NC_016627.1 PFAM: FtsK/SpoIIIE family; manually curated; DNA segregation ATPase FtsK 991158 11561229 Clocl_0860 Clostridium clariflavum DSM 19732 DNA segregation ATPase FtsK YP_005045470.1 987955 D 720554 CDS YP_005045471.1 374295280 11561230 991146..992894 1 NC_016627.1 PFAM: Archaeal ATPase; FtsK/SpoIIIE family; DNA segregation ATPase FtsK 992894 11561230 Clocl_0861 Clostridium clariflavum DSM 19732 DNA segregation ATPase FtsK YP_005045471.1 991146 D 720554 CDS YP_005045472.1 374295281 11561231 992908..993240 1 NC_016627.1 hypothetical protein 993240 11561231 Clocl_0862 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045472.1 992908 D 720554 CDS YP_005045473.1 374295282 11561232 993272..993433 1 NC_016627.1 hypothetical protein 993433 11561232 Clocl_0863 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045473.1 993272 D 720554 CDS YP_005045474.1 374295283 11561233 993847..994473 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase 994473 11561233 Clocl_0864 Clostridium clariflavum DSM 19732 nitroreductase YP_005045474.1 993847 D 720554 CDS YP_005045475.1 374295284 11561234 complement(994645..995175) 1 NC_016627.1 PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; isopentenyl-diphosphate delta-isomerase 995175 11561234 Clocl_0865 Clostridium clariflavum DSM 19732 isopentenyl-diphosphate delta-isomerase YP_005045475.1 994645 R 720554 CDS YP_005045476.1 374295285 11561235 complement(995218..996360) 1 NC_016627.1 PFAM: Aromatic prenyltransferase Orf2; Aromatic prenyltransferase Orf2 996360 11561235 Clocl_0866 Clostridium clariflavum DSM 19732 Aromatic prenyltransferase Orf2 YP_005045476.1 995218 R 720554 CDS YP_005045477.1 374295286 11561236 997182..997745 1 NC_016627.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; peroxiredoxin 997745 11561236 Clocl_0867 Clostridium clariflavum DSM 19732 peroxiredoxin YP_005045477.1 997182 D 720554 CDS YP_005045478.1 374295287 11561237 997758..999287 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit; alkyl hydroperoxide reductase 999287 11561237 Clocl_0868 Clostridium clariflavum DSM 19732 alkyl hydroperoxide reductase YP_005045478.1 997758 D 720554 CDS YP_005045479.1 374295288 11561238 999366..1000127 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 1000127 11561238 Clocl_0869 Clostridium clariflavum DSM 19732 transposase YP_005045479.1 999366 D 720554 CDS YP_005045480.1 374295289 11561239 complement(1000168..1001718) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 1001718 11561239 Clocl_0870 Clostridium clariflavum DSM 19732 transposase YP_005045480.1 1000168 R 720554 CDS YP_005045481.1 374295290 11561240 complement(1001933..1003558) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; oligopeptide ABC transporter periplasmic protein 1003558 11561240 Clocl_0871 Clostridium clariflavum DSM 19732 oligopeptide ABC transporter periplasmic protein YP_005045481.1 1001933 R 720554 CDS YP_005045482.1 374295291 11561241 complement(1003731..1004759) 1 NC_016627.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 1004759 11561241 Clocl_0872 Clostridium clariflavum DSM 19732 oligopeptide/dipeptide ABC transporter ATP-binding protein YP_005045482.1 1003731 R 720554 CDS YP_005045483.1 374295292 11561242 complement(1004752..1005759) 1 NC_016627.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; oligopeptide/dipeptide ABC transporter ATP-binding protein 1005759 11561242 Clocl_0873 Clostridium clariflavum DSM 19732 oligopeptide/dipeptide ABC transporter ATP-binding protein YP_005045483.1 1004752 R 720554 CDS YP_005045484.1 374295293 11561243 complement(1005827..1006822) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 1006822 11561243 Clocl_0874 Clostridium clariflavum DSM 19732 dipeptide/oligopeptide/nickel ABC transporter permease YP_005045484.1 1005827 R 720554 CDS YP_005045485.1 374295294 11561244 complement(1006975..1007898) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; dipeptide/oligopeptide/nickel ABC transporter permease 1007898 11561244 Clocl_0875 Clostridium clariflavum DSM 19732 dipeptide/oligopeptide/nickel ABC transporter permease YP_005045485.1 1006975 R 720554 CDS YP_005045486.1 374295295 11561246 1009931..1010494 1 NC_016627.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; peroxiredoxin 1010494 11561246 Clocl_0877 Clostridium clariflavum DSM 19732 peroxiredoxin YP_005045486.1 1009931 D 720554 CDS YP_005045487.1 374295296 11561249 1014392..1014583 1 NC_016627.1 hypothetical protein 1014583 11561249 Clocl_0880 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045487.1 1014392 D 720554 CDS YP_005045488.1 374295297 11561251 1017131..1017526 1 NC_016627.1 hypothetical protein 1017526 11561251 Clocl_0882 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045488.1 1017131 D 720554 CDS YP_005045489.1 374295298 11561252 1017624..1017806 1 NC_016627.1 hypothetical protein 1017806 11561252 Clocl_0883 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045489.1 1017624 D 720554 CDS YP_005045490.1 374295299 11561253 1017844..1018989 1 NC_016627.1 PFAM: Peptidase family M50; Peptidase family M50 1018989 11561253 Clocl_0884 Clostridium clariflavum DSM 19732 Peptidase family M50 YP_005045490.1 1017844 D 720554 CDS YP_005045491.1 374295300 11561254 1019955..1020431 1 NC_016627.1 manually curated; hypothetical protein 1020431 11561254 Clocl_0885 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045491.1 1019955 D 720554 CDS YP_005045492.1 374295301 11561255 1020424..1021446 1 NC_016627.1 hypothetical protein 1021446 11561255 Clocl_0886 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045492.1 1020424 D 720554 CDS YP_005045493.1 374295302 11561257 1022917..1023687 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1023687 11561257 Clocl_0888 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005045493.1 1022917 D 720554 CDS YP_005045494.1 374295303 11561258 1023684..1026296 1 NC_016627.1 hypothetical protein 1026296 11561258 Clocl_0889 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045494.1 1023684 D 720554 CDS YP_005045495.1 374295304 11561259 1026382..1027329 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1027329 11561259 Clocl_0890 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005045495.1 1026382 D 720554 CDS YP_005045496.1 374295305 11561260 1028125..1029369 1 NC_016627.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; Retron-type reverse transcriptase 1029369 11561260 Clocl_0891 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005045496.1 1028125 D 720554 CDS YP_005045497.1 374295306 11561262 complement(1029561..1029845) 1 NC_016627.1 hypothetical protein 1029845 11561262 Clocl_0893 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045497.1 1029561 R 720554 CDS YP_005045498.1 374295307 11561264 complement(1031515..1031868) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1031868 11561264 Clocl_0895 Clostridium clariflavum DSM 19732 transposase YP_005045498.1 1031515 R 720554 CDS YP_005045499.1 374295308 11561265 complement(1031865..1032218) 1 NC_016627.1 PFAM: Transposase; Transposase 1032218 11561265 Clocl_0896 Clostridium clariflavum DSM 19732 Transposase YP_005045499.1 1031865 R 720554 CDS YP_005045500.1 374295309 11561266 complement(1032426..1035365) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1035365 11561266 Clocl_0897 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005045500.1 1032426 R 720554 CDS YP_005045501.1 374295310 11561268 1036767..1037390 1 NC_016627.1 PFAM: Bacterial transcription activator, effector binding domain; Uncharacterized conserved protein (DUF2174); hypothetical protein 1037390 11561268 Clocl_0899 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045501.1 1036767 D 720554 CDS YP_005045502.1 374295311 11561269 1037414..1037851 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 1037851 11561269 Clocl_0900 Clostridium clariflavum DSM 19732 acetyltransferase, N-acetylglutamate synthase YP_005045502.1 1037414 D 720554 CDS YP_005045503.1 374295312 11561270 complement(1037940..1039712) 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; beta-mannanase 1039712 11561270 Clocl_0901 Clostridium clariflavum DSM 19732 beta-mannanase YP_005045503.1 1037940 R 720554 CDS YP_005045504.1 374295313 11561271 complement(1040210..1041109) 1 NC_016627.1 PFAM: Integrase core domain; transposase 1041109 11561271 Clocl_0902 Clostridium clariflavum DSM 19732 transposase YP_005045504.1 1040210 R 720554 CDS YP_005045505.1 374295314 11561272 complement(1041069..1041362) 1 NC_016627.1 PFAM: Transposase; transposase 1041362 11561272 Clocl_0903 Clostridium clariflavum DSM 19732 transposase YP_005045505.1 1041069 R 720554 CDS YP_005045506.1 374295315 11561273 1041633..1041998 1 NC_016627.1 PFAM: Penicillinase repressor; putative transcriptional regulator 1041998 11561273 Clocl_0904 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005045506.1 1041633 D 720554 CDS YP_005045507.1 374295316 11561274 1042084..1043856 1 NC_016627.1 PFAM: Flavin containing amine oxidoreductase; monoamine oxidase 1043856 11561274 Clocl_0905 Clostridium clariflavum DSM 19732 monoamine oxidase YP_005045507.1 1042084 D 720554 CDS YP_005045508.1 374295317 11561275 complement(1043912..1046593) 1 NC_016627.1 PFAM: BNR/Asp-box repeat; BNR/Asp-box repeat-containing protein 1046593 11561275 Clocl_0906 Clostridium clariflavum DSM 19732 BNR/Asp-box repeat-containing protein YP_005045508.1 1043912 R 720554 CDS YP_005045509.1 374295318 11561276 1047160..1049379 1 NC_016627.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 1049379 11561276 Clocl_0907 Clostridium clariflavum DSM 19732 formate acetyltransferase 1 YP_005045509.1 1047160 D 720554 CDS YP_005045510.1 374295319 11561277 1049389..1050108 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase 1-activating enzyme 1050108 11561277 Clocl_0908 Clostridium clariflavum DSM 19732 pyruvate formate-lyase 1-activating enzyme YP_005045510.1 1049389 D 720554 CDS YP_005045511.1 374295320 11561278 1050197..1051051 1 NC_016627.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter family protein 1051051 11561278 Clocl_0909 Clostridium clariflavum DSM 19732 formate/nitrite transporter family protein YP_005045511.1 1050197 D 720554 CDS YP_005045512.1 374295321 11561279 1051193..1051849 1 NC_016627.1 hypothetical protein 1051849 11561279 Clocl_0910 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045512.1 1051193 D 720554 CDS YP_005045513.1 374295322 11561280 complement(1051958..1054108) 1 NC_016627.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; ferrous iron transporter FeoB 1054108 11561280 Clocl_0911 Clostridium clariflavum DSM 19732 ferrous iron transporter FeoB YP_005045513.1 1051958 R 720554 CDS YP_005045514.1 374295323 11561281 1054496..1055308 1 NC_016627.1 PFAM: ZIP Zinc transporter; putative divalent heavy-metal cations transporter 1055308 11561281 Clocl_0912 Clostridium clariflavum DSM 19732 putative divalent heavy-metal cations transporter YP_005045514.1 1054496 D 720554 CDS YP_005045515.1 374295324 11561282 1055552..1056406 1 NC_016627.1 PFAM: Uracil DNA glycosylase superfamily; G:T/U mismatch-specific DNA glycosylase 1056406 11561282 Clocl_0913 Clostridium clariflavum DSM 19732 G:T/U mismatch-specific DNA glycosylase YP_005045515.1 1055552 D 720554 CDS YP_005045516.1 374295325 11561283 1056567..1057061 1 NC_016627.1 PFAM: Rubrerythrin; rubrerythrin 1057061 11561283 Clocl_0914 Clostridium clariflavum DSM 19732 rubrerythrin YP_005045516.1 1056567 D 720554 CDS YP_005045517.1 374295326 11561284 complement(1057260..1059887) 1 NC_016627.1 PFAM: Topoisomerase DNA binding C4 zinc finger; manually curated; topoisomerase-like C4 zinc finger-containing protein 1059887 11561284 Clocl_0915 Clostridium clariflavum DSM 19732 topoisomerase-like C4 zinc finger-containing protein YP_005045517.1 1057260 R 720554 CDS YP_005045518.1 374295327 11561285 join(1060090..1060890,1060890..1061480) 1 NC_016627.1 PFAM: Transposase DDE domain; manually curated; transposase family protein 1061480 11561285 Clocl_0916 Clostridium clariflavum DSM 19732 transposase family protein YP_005045518.1 1060090 D 720554 CDS YP_005045519.1 374295328 11561286 1061732..1063513 1 NC_016627.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase; hydroxylamine reductase 1063513 11561286 Clocl_0917 Clostridium clariflavum DSM 19732 hydroxylamine reductase YP_005045519.1 1061732 D 720554 CDS YP_005045520.1 374295329 11561287 1063705..1064244 1 NC_016627.1 PFAM: HD domain; putative HD superfamily hydrolase involved in NAD metabolism 1064244 11561287 Clocl_0918 Clostridium clariflavum DSM 19732 putative HD superfamily hydrolase involved in NAD metabolism YP_005045520.1 1063705 D 720554 CDS YP_005045521.1 374295330 11561288 1064601..1065512 1 NC_016627.1 PFAM: FMN-dependent dehydrogenase; alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase 1065512 11561288 Clocl_0919 Clostridium clariflavum DSM 19732 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase YP_005045521.1 1064601 D 720554 CDS YP_005045522.1 374295331 11561289 1065549..1066385 1 NC_016627.1 PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase 1066385 11561289 Clocl_0920 Clostridium clariflavum DSM 19732 sugar phosphate isomerase/epimerase YP_005045522.1 1065549 D 720554 CDS YP_005045523.1 374295332 11561290 complement(1066514..1066912) 1 NC_016627.1 hypothetical protein 1066912 11561290 Clocl_0921 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045523.1 1066514 R 720554 CDS YP_005045524.1 374295333 11561291 1067202..1067648 1 NC_016627.1 hypothetical protein 1067648 11561291 Clocl_0922 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045524.1 1067202 D 720554 CDS YP_005045525.1 374295334 11561292 1068026..1069771 1 NC_016627.1 PFAM: Dockerin type I repeat; Pectinesterase; Carbohydrate binding module (family 6); pectin methylesterase 1069771 11561292 Clocl_0923 Clostridium clariflavum DSM 19732 pectin methylesterase YP_005045525.1 1068026 D 720554 CDS YP_005045526.1 374295335 11561293 1070071..1072221 1 NC_016627.1 PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; helicase, putative, RecD/TraA family; helicase, putative, RecD/TraA family 1072221 11561293 Clocl_0924 Clostridium clariflavum DSM 19732 helicase, putative, RecD/TraA family YP_005045526.1 1070071 D 720554 CDS YP_005045527.1 374295336 11561294 complement(1072333..1072926) 1 NC_016627.1 PFAM: Cupin domain; mannose-6-phosphate isomerase 1072926 11561294 Clocl_0925 Clostridium clariflavum DSM 19732 mannose-6-phosphate isomerase YP_005045527.1 1072333 R 720554 CDS YP_005045528.1 374295337 11561295 complement(1073015..1073314) 1 NC_016627.1 hypothetical protein 1073314 11561295 Clocl_0926 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045528.1 1073015 R 720554 CDS YP_005045529.1 374295338 11561296 1073648..1076230 1 NC_016627.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; phosphoenolpyruvate synthase 1076230 11561296 Clocl_0927 Clostridium clariflavum DSM 19732 phosphoenolpyruvate synthase YP_005045529.1 1073648 D 720554 CDS YP_005045530.1 374295339 11561297 1076344..1077519 1 NC_016627.1 PFAM: Iron-containing alcohol dehydrogenase; Fe-dependent oxidoreductase, alcohol dehydrogenase 1077519 11561297 Clocl_0928 Clostridium clariflavum DSM 19732 Fe-dependent oxidoreductase, alcohol dehydrogenase YP_005045530.1 1076344 D 720554 CDS YP_005045531.1 374295340 11561298 1077760..1079379 1 NC_016627.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol-1-phosphate/altronate dehydrogenase 1079379 11561298 Clocl_0929 Clostridium clariflavum DSM 19732 mannitol-1-phosphate/altronate dehydrogenase YP_005045531.1 1077760 D 720554 CDS YP_005045532.1 374295341 11561299 1079428..1081521 1 NC_016627.1 PFAM: Glycosyl hydrolase family 67 C-terminus; Glycosyl hydrolase family 67 middle domain; Glycosyl hydrolase family 67 N-terminus; alpha-glucuronidase 1081521 11561299 Clocl_0930 Clostridium clariflavum DSM 19732 alpha-glucuronidase YP_005045532.1 1079428 D 720554 CDS YP_005045533.1 374295342 11561300 1081493..1081591 1 NC_016627.1 hypothetical protein 1081591 11561300 Clocl_0931 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045533.1 1081493 D 720554 CDS YP_005045534.1 374295343 11561301 complement(1081648..1083813) 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; sugar ABC transporter periplasmic protein 1083813 11561301 Clocl_0932 Clostridium clariflavum DSM 19732 sugar ABC transporter periplasmic protein YP_005045534.1 1081648 R 720554 CDS YP_005045535.1 374295344 11561302 1084273..1086846 1 NC_016627.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 1086846 11561302 Clocl_0933 Clostridium clariflavum DSM 19732 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein YP_005045535.1 1084273 D 720554 CDS YP_005045536.1 374295345 11561303 1087080..1087520 1 NC_016627.1 PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 1087520 11561303 Clocl_0934 Clostridium clariflavum DSM 19732 Fe2+/Zn2+ uptake regulation protein YP_005045536.1 1087080 D 720554 CDS YP_005045537.1 374295346 11561304 1087599..1087904 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325); ABC transporter substrate-binding protein 1087904 11561304 Clocl_0935 Clostridium clariflavum DSM 19732 ABC transporter substrate-binding protein YP_005045537.1 1087599 D 720554 CDS YP_005045538.1 374295347 11561305 1087946..1088377 1 NC_016627.1 PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain; flavodoxin, short chain 1088377 11561305 Clocl_0936 Clostridium clariflavum DSM 19732 flavodoxin, short chain YP_005045538.1 1087946 D 720554 CDS YP_005045539.1 374295348 11561306 1088652..1089272 1 NC_016627.1 hypothetical protein 1089272 11561306 Clocl_0937 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045539.1 1088652 D 720554 CDS YP_005045540.1 374295349 11561307 1089856..1092387 1 NC_016627.1 PFAM: AMP-binding enzyme; Xylose isomerase-like TIM barrel; acyl-CoA synthetase 1092387 11561307 Clocl_0938 Clostridium clariflavum DSM 19732 acyl-CoA synthetase YP_005045540.1 1089856 D 720554 CDS YP_005045541.1 374295350 11561308 1092701..1093300 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase-like oxidoreductase 1093300 11561308 Clocl_0939 Clostridium clariflavum DSM 19732 nitroreductase-like oxidoreductase YP_005045541.1 1092701 D 720554 CDS YP_005045542.1 374295351 11561309 1093543..1094103 1 NC_016627.1 hypothetical protein 1094103 11561309 Clocl_0940 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045542.1 1093543 D 720554 CDS YP_005045543.1 374295352 11561310 join(1094191..1094403,1094403..1095407) 1 NC_016627.1 PFAM: Transposase, Mutator family; manually curated; transposase 1095407 11561310 Clocl_0941 Clostridium clariflavum DSM 19732 transposase YP_005045543.1 1094191 D 720554 CDS YP_005045544.1 374295353 11561311 1095656..1096252 1 NC_016627.1 hypothetical protein 1096252 11561311 Clocl_0942 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045544.1 1095656 D 720554 CDS YP_005045545.1 374295354 11561312 complement(1096390..1098030) 1 NC_016627.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 1098030 11561312 Clocl_0943 Clostridium clariflavum DSM 19732 glutamyl-tRNA synthetase YP_005045545.1 1096390 R 720554 CDS YP_005045546.1 374295355 11561313 complement(1098238..1099371) 1 NC_016627.1 hypothetical protein 1099371 11561313 Clocl_0944 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045546.1 1098238 R 720554 CDS YP_005045547.1 374295356 11561314 1099745..1100566 1 NC_016627.1 PFAM: Protein of unknown function, DUF624; manually curated; putative integral membrane protein 1100566 11561314 Clocl_0945 Clostridium clariflavum DSM 19732 putative integral membrane protein YP_005045547.1 1099745 D 720554 CDS YP_005045548.1 374295357 11561315 1100678..1101853 1 NC_016627.1 PFAM: GDSL-like Lipase/Acylhydrolase; lysophospholipase L1-like esterase 1101853 11561315 Clocl_0946 Clostridium clariflavum DSM 19732 lysophospholipase L1-like esterase YP_005045548.1 1100678 D 720554 CDS YP_005045549.1 374295358 11561316 1101986..1102453 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; putative acetyltransferase 1102453 11561316 Clocl_0947 Clostridium clariflavum DSM 19732 putative acetyltransferase YP_005045549.1 1101986 D 720554 CDS YP_005045550.1 374295359 11561317 1102600..1104978 1 NC_016627.1 PFAM: Clostripain family; clostripain family protease 1104978 11561317 Clocl_0948 Clostridium clariflavum DSM 19732 clostripain family protease YP_005045550.1 1102600 D 720554 CDS YP_005045551.1 374295360 11561318 1105028..1105300 1 NC_016627.1 PFAM: TfoX C-terminal domain; TfoX C-terminal domain-containing protein 1105300 11561318 Clocl_0949 Clostridium clariflavum DSM 19732 TfoX C-terminal domain-containing protein YP_005045551.1 1105028 D 720554 CDS YP_005045552.1 374295361 11561319 1105768..1105986 1 NC_016627.1 hypothetical protein 1105986 11561319 Clocl_0950 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045552.1 1105768 D 720554 CDS YP_005045553.1 374295362 11561320 1105965..1107365 1 NC_016627.1 PFAM: Nickel-dependent hydrogenase; Ni,Fe-hydrogenase I large subunit 1107365 11561320 Clocl_0951 Clostridium clariflavum DSM 19732 Ni,Fe-hydrogenase I large subunit YP_005045553.1 1105965 D 720554 CDS YP_005045554.1 374295363 11561321 1107629..1109287 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; hypothetical protein 1109287 11561321 Clocl_0952 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045554.1 1107629 D 720554 CDS YP_005045555.1 374295364 11561322 1109490..1110149 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein 1110149 11561322 Clocl_0953 Clostridium clariflavum DSM 19732 haloacid dehalogenase superfamily protein YP_005045555.1 1109490 D 720554 CDS YP_005045556.1 374295365 11561323 1110547..1111797 1 NC_016627.1 PFAM: Major Facilitator Superfamily; sugar phosphate permease 1111797 11561323 Clocl_0954 Clostridium clariflavum DSM 19732 sugar phosphate permease YP_005045556.1 1110547 D 720554 CDS YP_005045557.1 374295366 11561324 1112196..1113161 1 NC_016627.1 PFAM: Dihydrouridine synthase (Dus); tRNA-dihydrouridine synthase 1113161 11561324 Clocl_0955 Clostridium clariflavum DSM 19732 tRNA-dihydrouridine synthase YP_005045557.1 1112196 D 720554 CDS YP_005045558.1 374295367 11561325 1113314..1113514 1 NC_016627.1 PFAM: 'Cold-shock' DNA-binding domain; cold shock protein 1113514 11561325 Clocl_0956 Clostridium clariflavum DSM 19732 cold shock protein YP_005045558.1 1113314 D 720554 CDS YP_005045559.1 374295368 11561326 1113935..1114525 1 NC_016627.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC; putative sporulation protein YyaC 1114525 11561326 Clocl_0957 Clostridium clariflavum DSM 19732 putative sporulation protein YyaC YP_005045559.1 1113935 D 720554 CDS YP_005045560.1 374295369 11561327 1114658..1115146 1 NC_016627.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybaK/ebsC protein 1115146 11561327 Clocl_0958 Clostridium clariflavum DSM 19732 ybaK/ebsC protein YP_005045560.1 1114658 D 720554 CDS YP_005045561.1 374295370 11561328 complement(1115154..1115825) 1 NC_016627.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1115825 11561328 Clocl_0959 Clostridium clariflavum DSM 19732 tRNA (guanine-N(7)-)-methyltransferase YP_005045561.1 1115154 R 720554 CDS YP_005045562.1 374295371 11561329 1116149..1116529 1 NC_016627.1 PFAM: Protein of unknown function (DUF2809); hypothetical protein 1116529 11561329 Clocl_0960 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045562.1 1116149 D 720554 CDS YP_005045563.1 374295372 11561330 1116676..1117605 1 NC_016627.1 hypothetical protein 1117605 11561330 Clocl_0961 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045563.1 1116676 D 720554 CDS YP_005045564.1 374295373 11561332 complement(1117919..1118221) 1 NC_016627.1 PFAM: Branched-chain amino acid transport protein (AzlD); hypothetical protein 1118221 11561332 Clocl_0963 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045564.1 1117919 R 720554 CDS YP_005045565.1 374295374 11561333 complement(1118226..1118948) 1 NC_016627.1 PFAM: AzlC protein; putative branched-chain amino acid permease (azaleucine resistance) 1118948 11561333 Clocl_0964 Clostridium clariflavum DSM 19732 putative branched-chain amino acid permease (azaleucine resistance) YP_005045565.1 1118226 R 720554 CDS YP_005045566.1 374295375 11561334 complement(1119212..1121299) 1 NC_016627.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; inorganic pyrophosphatase 1121299 11561334 Clocl_0965 Clostridium clariflavum DSM 19732 inorganic pyrophosphatase YP_005045566.1 1119212 R 720554 CDS YP_005045567.1 374295376 11561335 1122046..1123230 1 NC_016627.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 1123230 11561335 Clocl_0966 Clostridium clariflavum DSM 19732 tryptophan synthase subunit beta YP_005045567.1 1122046 D 720554 CDS YP_005045568.1 374295377 11561336 1123223..1123993 1 NC_016627.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 1123993 11561336 Clocl_0967 Clostridium clariflavum DSM 19732 tryptophan synthase subunit alpha YP_005045568.1 1123223 D 720554 CDS YP_005045569.1 374295378 11561337 1124324..1124689 1 NC_016627.1 PFAM: Phage derived protein Gp49-like (DUF891); phage-like protein 1124689 11561337 Clocl_0968 Clostridium clariflavum DSM 19732 phage-like protein YP_005045569.1 1124324 D 720554 CDS YP_005045570.1 374295379 11561338 1124682..1124966 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 1124966 11561338 Clocl_0969 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005045570.1 1124682 D 720554 CDS YP_005045571.1 374295380 11561339 1125335..1127638 1 NC_016627.1 manually curated; hypothetical protein 1127638 11561339 Clocl_0970 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045571.1 1125335 D 720554 CDS YP_005045572.1 374295381 11561340 1128044..1129342 1 NC_016627.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein 1129342 11561340 Clocl_0971 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045572.1 1128044 D 720554 CDS YP_005045573.1 374295382 11561341 1129784..1130179 1 NC_016627.1 hypothetical protein 1130179 11561341 Clocl_0972 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045573.1 1129784 D 720554 CDS YP_005045574.1 374295383 11561342 1131018..1131509 1 NC_016627.1 PFAM: CheW-like domain; chemotaxis signal transduction protein 1131509 11561342 Clocl_0973 Clostridium clariflavum DSM 19732 chemotaxis signal transduction protein YP_005045574.1 1131018 D 720554 CDS YP_005045575.1 374295384 11561343 1131641..1133500 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 1133500 11561343 Clocl_0974 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005045575.1 1131641 D 720554 CDS YP_005045576.1 374295385 11561344 1133759..1135450 1 NC_016627.1 PFAM: MutS domain V; mismatch repair ATPase (MutS family) 1135450 11561344 Clocl_0975 Clostridium clariflavum DSM 19732 mismatch repair ATPase (MutS family) YP_005045576.1 1133759 D 720554 CDS YP_005045577.1 374295386 11561345 1135461..1137149 1 NC_016627.1 PFAM: MutS domain V; mismatch repair ATPase (MutS family) 1137149 11561345 Clocl_0976 Clostridium clariflavum DSM 19732 mismatch repair ATPase (MutS family) YP_005045577.1 1135461 D 720554 CDS YP_005045578.1 374295387 11561346 1137653..1139536 1 NC_016627.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit 1139536 11561346 Clocl_0977 Clostridium clariflavum DSM 19732 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit YP_005045578.1 1137653 D 720554 CDS YP_005045579.1 374295388 11561347 1139589..1140440 1 NC_016627.1 PFAM: NADH dehydrogenase; formate hydrogenlyase subunit 4 1140440 11561347 Clocl_0978 Clostridium clariflavum DSM 19732 formate hydrogenlyase subunit 4 YP_005045579.1 1139589 D 720554 CDS YP_005045580.1 374295389 11561348 1140452..1140886 1 NC_016627.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; Ni,Fe-hydrogenase III small subunit 1140886 11561348 Clocl_0979 Clostridium clariflavum DSM 19732 Ni,Fe-hydrogenase III small subunit YP_005045580.1 1140452 D 720554 CDS YP_005045581.1 374295390 11561349 1140915..1141259 1 NC_016627.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH:ubiquinone oxidoreductase 27 kD subunit 1141259 11561349 Clocl_0980 Clostridium clariflavum DSM 19732 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005045581.1 1140915 D 720554 CDS YP_005045582.1 374295391 11561350 1141291..1142370 1 NC_016627.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; Ni,Fe-hydrogenase III large subunit 1142370 11561350 Clocl_0981 Clostridium clariflavum DSM 19732 Ni,Fe-hydrogenase III large subunit YP_005045582.1 1141291 D 720554 CDS YP_005045583.1 374295392 11561351 1142375..1142740 1 NC_016627.1 PFAM: 4Fe-4S binding domain; NADH:ubiquinone oxidoreductase chain I-like protein 1142740 11561351 Clocl_0982 Clostridium clariflavum DSM 19732 NADH:ubiquinone oxidoreductase chain I-like protein YP_005045583.1 1142375 D 720554 CDS YP_005045584.1 374295393 11561352 1142706..1143053 1 NC_016627.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1143053 11561352 Clocl_0983 Clostridium clariflavum DSM 19732 hydrogenase nickel incorporation protein HypA YP_005045584.1 1142706 D 720554 CDS YP_005045585.1 374295394 11561353 1143134..1143784 1 NC_016627.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1143784 11561353 Clocl_0984 Clostridium clariflavum DSM 19732 hydrogenase nickel incorporation protein HypB YP_005045585.1 1143134 D 720554 CDS YP_005045586.1 374295395 11561354 1143784..1146123 1 NC_016627.1 PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 1146123 11561354 Clocl_0985 Clostridium clariflavum DSM 19732 (NiFe) hydrogenase maturation protein HypF YP_005045586.1 1143784 D 720554 CDS YP_005045587.1 374295396 11561355 1146145..1146360 1 NC_016627.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1146360 11561355 Clocl_0986 Clostridium clariflavum DSM 19732 hydrogenase assembly chaperone HypC/HupF YP_005045587.1 1146145 D 720554 CDS YP_005045588.1 374295397 11561356 1146360..1147409 1 NC_016627.1 PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 1147409 11561356 Clocl_0987 Clostridium clariflavum DSM 19732 hydrogenase expression/formation protein HypD YP_005045588.1 1146360 D 720554 CDS YP_005045589.1 374295398 11561357 1147434..1148432 1 NC_016627.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1148432 11561357 Clocl_0988 Clostridium clariflavum DSM 19732 hydrogenase expression/formation protein HypE YP_005045589.1 1147434 D 720554 CDS YP_005045590.1 374295399 11561358 1148517..1149431 1 NC_016627.1 PFAM: NUDIX domain; ADP-ribose pyrophosphatase 1149431 11561358 Clocl_0989 Clostridium clariflavum DSM 19732 ADP-ribose pyrophosphatase YP_005045590.1 1148517 D 720554 CDS YP_005045591.1 374295400 11561359 1149456..1150130 1 NC_016627.1 PFAM: Isochorismatase family; nicotinamidase-like amidase 1150130 11561359 Clocl_0990 Clostridium clariflavum DSM 19732 nicotinamidase-like amidase YP_005045591.1 1149456 D 720554 CDS YP_005045592.1 374295401 11561360 1150184..1151626 1 NC_016627.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase; putative nicotinate phosphoribosyltransferase 1151626 11561360 Clocl_0991 Clostridium clariflavum DSM 19732 putative nicotinate phosphoribosyltransferase YP_005045592.1 1150184 D 720554 CDS YP_005045593.1 374295402 11561361 1152099..1153901 1 NC_016627.1 PFAM: Phosphoenolpyruvate carboxykinase; phosphoenolpyruvate carboxykinase (GTP) 1153901 11561361 Clocl_0992 Clostridium clariflavum DSM 19732 phosphoenolpyruvate carboxykinase (GTP) YP_005045593.1 1152099 D 720554 CDS YP_005045594.1 374295403 11561362 complement(1153980..1154927) 1 NC_016627.1 manually curated; hypothetical protein 1154927 11561362 Clocl_0993 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045594.1 1153980 R 720554 CDS YP_005045595.1 374295404 11561363 complement(1155032..1155787) 1 NC_016627.1 hypothetical protein 1155787 11561363 Clocl_0994 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045595.1 1155032 R 720554 CDS YP_005045596.1 374295405 11561364 complement(1155781..1156761) 1 NC_016627.1 hypothetical protein 1156761 11561364 Clocl_0995 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045596.1 1155781 R 720554 CDS YP_005045597.1 374295406 11561365 complement(1156993..1158183) 1 NC_016627.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 1158183 11561365 Clocl_0996 Clostridium clariflavum DSM 19732 tryptophan synthase subunit beta YP_005045597.1 1156993 R 720554 CDS YP_005045598.1 374295407 11561366 1158546..1159445 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Cell Wall Hydrolase; copper amine oxidase family protein 1159445 11561366 Clocl_0997 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005045598.1 1158546 D 720554 CDS YP_005045599.1 374295408 11561367 1159826..1160797 1 NC_016627.1 PFAM: Periplasmic solute binding protein family; ABC-type metal ion transport system, periplasmic component/surface adhesin 1160797 11561367 Clocl_0998 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005045599.1 1159826 D 720554 CDS YP_005045600.1 374295409 11561368 1160794..1161594 1 NC_016627.1 PFAM: ABC transporter; ATPase component of Mn/Zn ABC-type transporter 1161594 11561368 Clocl_0999 Clostridium clariflavum DSM 19732 ATPase component of Mn/Zn ABC-type transporter YP_005045600.1 1160794 D 720554 CDS YP_005045601.1 374295410 11561369 1161591..1162436 1 NC_016627.1 PFAM: ABC 3 transport family; ABC-type Mn2+/Zn2+ transport system, permease component 1162436 11561369 Clocl_1000 Clostridium clariflavum DSM 19732 ABC-type Mn2+/Zn2+ transport system, permease component YP_005045601.1 1161591 D 720554 CDS YP_005045602.1 374295411 11561370 1162490..1164838 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Transglutaminase-like superfamily; Leucine Rich Repeat; copper amine oxidase family protein,Leucine Rich Repeat (LRR)-containing protein,Transglutaminase-like superfamily protein 1164838 11561370 Clocl_1001 Clostridium clariflavum DSM 19732 copper amine oxidase family protein,Leucine Rich Repeat (LRR)-containing protein,Transglutaminase-like superfamily protein YP_005045602.1 1162490 D 720554 CDS YP_005045603.1 374295412 11561371 1164992..1165720 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 1165720 11561371 Clocl_1002 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005045603.1 1164992 D 720554 CDS YP_005045604.1 374295413 11561372 1165710..1167374 1 NC_016627.1 hypothetical protein 1167374 11561372 Clocl_1003 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045604.1 1165710 D 720554 CDS YP_005045605.1 374295414 11561373 complement(1167377..1168096) 1 NC_016627.1 PFAM: PHP domain; capsular polysaccharide biosynthesis protein 1168096 11561373 Clocl_1004 Clostridium clariflavum DSM 19732 capsular polysaccharide biosynthesis protein YP_005045605.1 1167377 R 720554 CDS YP_005045606.1 374295415 11561374 complement(1168089..1168829) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide biosynthesis protein 1168829 11561374 Clocl_1005 Clostridium clariflavum DSM 19732 capsular exopolysaccharide biosynthesis protein YP_005045606.1 1168089 R 720554 CDS YP_005045607.1 374295416 11561375 complement(1168843..1169511) 1 NC_016627.1 PFAM: Chain length determinant protein; capsular polysaccharide biosynthesis protein 1169511 11561375 Clocl_1006 Clostridium clariflavum DSM 19732 capsular polysaccharide biosynthesis protein YP_005045607.1 1168843 R 720554 CDS YP_005045608.1 374295417 11561376 complement(1169681..1170013) 1 NC_016627.1 hypothetical protein 1170013 11561376 Clocl_1007 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045608.1 1169681 R 720554 CDS YP_005045609.1 374295418 11561377 1170302..1172146 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase 1172146 11561377 Clocl_1008 Clostridium clariflavum DSM 19732 putative nucleoside-diphosphate sugar epimerase YP_005045609.1 1170302 D 720554 CDS YP_005045610.1 374295419 11561378 1172156..1172392 1 NC_016627.1 hypothetical protein 1172392 11561378 Clocl_1009 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045610.1 1172156 D 720554 CDS YP_005045611.1 374295420 11561379 1172428..1173186 1 NC_016627.1 PFAM: short chain dehydrogenase; dehydrogenase 1173186 11561379 Clocl_1010 Clostridium clariflavum DSM 19732 dehydrogenase YP_005045611.1 1172428 D 720554 CDS YP_005045612.1 374295421 11561380 1173198..1173857 1 NC_016627.1 PFAM: Bacterial sugar transferase; glycosyl transferase 1173857 11561380 Clocl_1011 Clostridium clariflavum DSM 19732 glycosyl transferase YP_005045612.1 1173198 D 720554 CDS YP_005045613.1 374295422 11561381 1173907..1174764 1 NC_016627.1 PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 1174764 11561381 Clocl_1012 Clostridium clariflavum DSM 19732 transketolase YP_005045613.1 1173907 D 720554 CDS YP_005045614.1 374295423 11561382 1174761..1175690 1 NC_016627.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase 1175690 11561382 Clocl_1013 Clostridium clariflavum DSM 19732 transketolase YP_005045614.1 1174761 D 720554 CDS YP_005045615.1 374295424 11561383 1175690..1176460 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 1176460 11561383 Clocl_1014 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005045615.1 1175690 D 720554 CDS YP_005045616.1 374295425 11561384 1176566..1177732 1 NC_016627.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 1177732 11561384 Clocl_1015 Clostridium clariflavum DSM 19732 nucleotide sugar dehydrogenase YP_005045616.1 1176566 D 720554 CDS YP_005045617.1 374295426 11561385 1177797..1178882 1 NC_016627.1 manually curated; hypothetical protein 1178882 11561385 Clocl_1016 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045617.1 1177797 D 720554 CDS YP_005045618.1 374295427 11561386 1178923..1180209 1 NC_016627.1 PFAM: O-Antigen ligase; O-Antigen ligase 1180209 11561386 Clocl_1017 Clostridium clariflavum DSM 19732 O-Antigen ligase YP_005045618.1 1178923 D 720554 CDS YP_005045619.1 374295428 11561387 1180206..1181057 1 NC_016627.1 PFAM: LICD Protein Family; LPS biosynthesis protein 1181057 11561387 Clocl_1018 Clostridium clariflavum DSM 19732 LPS biosynthesis protein YP_005045619.1 1180206 D 720554 CDS YP_005045620.1 374295429 11561388 1181390..1182133 1 NC_016627.1 PFAM: Nucleotidyl transferase; putative sugar nucleotidyltransferase 1182133 11561388 Clocl_1019 Clostridium clariflavum DSM 19732 putative sugar nucleotidyltransferase YP_005045620.1 1181390 D 720554 CDS YP_005045621.1 374295430 11561389 1182233..1183240 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase 1183240 11561389 Clocl_1020 Clostridium clariflavum DSM 19732 putative nucleoside-diphosphate sugar epimerase YP_005045621.1 1182233 D 720554 CDS YP_005045622.1 374295431 11561390 1183259..1184347 1 NC_016627.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis 1184347 11561390 Clocl_1021 Clostridium clariflavum DSM 19732 putative PLP-dependent enzyme possibly involved in cell wall biogenesis YP_005045622.1 1183259 D 720554 CDS YP_005045623.1 374295432 11561391 1184352..1185413 1 NC_016627.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis 1185413 11561391 Clocl_1022 Clostridium clariflavum DSM 19732 putative PLP-dependent enzyme possibly involved in cell wall biogenesis YP_005045623.1 1184352 D 720554 CDS YP_005045624.1 374295433 11561392 1185404..1185919 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; putative acyltransferase 1185919 11561392 Clocl_1023 Clostridium clariflavum DSM 19732 putative acyltransferase YP_005045624.1 1185404 D 720554 CDS YP_005045625.1 374295434 11561393 1185922..1186932 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 1186932 11561393 Clocl_1024 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005045625.1 1185922 D 720554 CDS YP_005045626.1 374295435 11561394 1186956..1188446 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; manually curated; membrane protein involved in the export of O-antigen and teichoic acid 1188446 11561394 Clocl_1025 Clostridium clariflavum DSM 19732 membrane protein involved in the export of O-antigen and teichoic acid YP_005045626.1 1186956 D 720554 CDS YP_005045627.1 374295436 11561395 1188630..1190816 1 NC_016627.1 PFAM: S-layer homology domain; zinc metalloprotease 1190816 11561395 Clocl_1026 Clostridium clariflavum DSM 19732 zinc metalloprotease YP_005045627.1 1188630 D 720554 CDS YP_005045628.1 374295437 11561396 complement(1190888..1191691) 1 NC_016627.1 PFAM: short chain dehydrogenase; dehydrogenase 1191691 11561396 Clocl_1027 Clostridium clariflavum DSM 19732 dehydrogenase YP_005045628.1 1190888 R 720554 CDS YP_005045629.1 374295438 11561397 1192248..1194650 1 NC_016627.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 1194650 11561397 Clocl_1028 Clostridium clariflavum DSM 19732 leucyl-tRNA synthetase YP_005045629.1 1192248 D 720554 CDS YP_005045630.1 374295439 11561398 1194899..1196767 1 NC_016627.1 PFAM: Endonuclease/Exonuclease/phosphatase family; manually curated; hypothetical protein 1196767 11561398 Clocl_1029 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045630.1 1194899 D 720554 CDS YP_005045631.1 374295440 11561399 1196906..1197472 1 NC_016627.1 PFAM: Rhomboid family; hypothetical protein 1197472 11561399 Clocl_1030 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045631.1 1196906 D 720554 CDS YP_005045632.1 374295441 11561400 1197687..1199822 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; family; transcriptional regulator 1199822 11561400 Clocl_1031 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005045632.1 1197687 D 720554 CDS YP_005045633.1 374295442 11561401 1199944..1202472 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 1202472 11561401 Clocl_1032 Clostridium clariflavum DSM 19732 transglutaminase YP_005045633.1 1199944 D 720554 CDS YP_005045634.1 374295443 11561402 1202499..1203650 1 NC_016627.1 manually curated; hypothetical protein 1203650 11561402 Clocl_1033 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045634.1 1202499 D 720554 CDS YP_005045635.1 374295444 11561403 1203598..1204596 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 1204596 11561403 Clocl_1034 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005045635.1 1203598 D 720554 CDS YP_005045636.1 374295445 11561404 1204597..1205919 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 1205919 11561404 Clocl_1035 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045636.1 1204597 D 720554 CDS YP_005045637.1 374295446 11561405 1205916..1206527 1 NC_016627.1 hypothetical protein 1206527 11561405 Clocl_1036 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045637.1 1205916 D 720554 CDS YP_005045638.1 374295447 11561406 1206782..1207483 1 NC_016627.1 hypothetical protein 1207483 11561406 Clocl_1037 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045638.1 1206782 D 720554 CDS YP_005045639.1 374295448 11561407 complement(1207619..1208203) 1 NC_016627.1 PFAM: Desulfoferrodoxin; Helix-turn-helix; putative transcriptional regulator 1208203 11561407 Clocl_1038 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005045639.1 1207619 R 720554 CDS YP_005045640.1 374295449 11561408 1208541..1209908 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 1209908 11561408 Clocl_1039 Clostridium clariflavum DSM 19732 putative efflux protein, MATE family YP_005045640.1 1208541 D 720554 CDS YP_005045641.1 374295450 11561409 complement(1210012..1210764) 1 NC_016627.1 PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase 1210764 11561409 Clocl_1040 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_005045641.1 1210012 R 720554 CDS YP_005045642.1 374295451 11561410 complement(1210774..1211805) 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 1211805 11561410 Clocl_1041 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005045642.1 1210774 R 720554 CDS YP_005045643.1 374295452 11561411 complement(1211811..1212572) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 1212572 11561411 Clocl_1042 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005045643.1 1211811 R 720554 CDS YP_005045644.1 374295453 11561412 complement(1212547..1212834) 1 NC_016627.1 PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family; hypothetical protein 1212834 11561412 Clocl_1043 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045644.1 1212547 R 720554 CDS YP_005045645.1 374295454 11561413 1213357..1216191 1 NC_016627.1 PFAM: S-layer homology domain; beta-propeller domain-containing protein, methanol dehydrogenase 1216191 11561413 Clocl_1044 Clostridium clariflavum DSM 19732 beta-propeller domain-containing protein, methanol dehydrogenase YP_005045645.1 1213357 D 720554 CDS YP_005045646.1 374295455 11561414 1216498..1217034 1 NC_016627.1 hypothetical protein 1217034 11561414 Clocl_1045 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045646.1 1216498 D 720554 CDS YP_005045647.1 374295456 11561415 1217171..1218466 1 NC_016627.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase 1218466 11561415 Clocl_1046 Clostridium clariflavum DSM 19732 glutamate-5-semialdehyde dehydrogenase YP_005045647.1 1217171 D 720554 CDS YP_005045648.1 374295457 11561416 1218804..1221545 1 NC_016627.1 PFAM: Dockerin type I repeat; manually curated; dockerin-like protein 1221545 11561416 Clocl_1047 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005045648.1 1218804 D 720554 CDS YP_005045649.1 374295458 11561417 1221905..1225024 1 NC_016627.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1225024 11561417 Clocl_1048 Clostridium clariflavum DSM 19732 isoleucyl-tRNA synthetase YP_005045649.1 1221905 D 720554 CDS YP_005045650.1 374295459 11561418 1226087..1227532 1 NC_016627.1 PFAM: Anticodon binding domain; Prolyl-tRNA synthetase, C-terminal; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family I; prolyl-tRNA synthetase, family I 1227532 11561418 Clocl_1049 Clostridium clariflavum DSM 19732 prolyl-tRNA synthetase, family I YP_005045650.1 1226087 D 720554 CDS YP_005045651.1 374295460 11561419 complement(1227932..1228402) 1 NC_016627.1 PFAM: CYTH domain; hypothetical protein 1228402 11561419 Clocl_1050 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045651.1 1227932 R 720554 CDS YP_005045652.1 374295461 11561420 1228834..1230534 1 NC_016627.1 PFAM: Dockerin type I repeat; hypothetical protein 1230534 11561420 Clocl_1051 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045652.1 1228834 D 720554 CDS YP_005045653.1 374295462 11561421 1230485..1230700 1 NC_016627.1 hypothetical protein 1230700 11561421 Clocl_1052 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045653.1 1230485 D 720554 CDS YP_005045654.1 374295463 11561422 complement(1230896..1232863) 1 NC_016627.1 PFAM: Cellulose binding domain; Cellulose binding domain-containing protein 1232863 11561422 Clocl_1053 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein YP_005045654.1 1230896 R 720554 CDS YP_005045655.1 374295464 11561423 complement(1232844..1233632) 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma-I factor 1233632 11561423 Clocl_1054 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005045655.1 1232844 R 720554 CDS YP_005045656.1 374295465 11561424 1234153..1235604 1 NC_016627.1 PFAM: Glycosyl hydrolases family 8; Dockerin type I repeat; endoglucanase Y 1235604 11561424 Clocl_1055 Clostridium clariflavum DSM 19732 endoglucanase Y YP_005045656.1 1234153 D 720554 CDS YP_005045657.1 374295466 11561425 1235930..1238128 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein 1238128 11561425 Clocl_1056 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein,dockerin-like protein YP_005045657.1 1235930 D 720554 CDS YP_005045658.1 374295467 11561426 complement(1238207..1239361) 1 NC_016627.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 1239361 11561426 Clocl_1057 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine carboxypeptidase YP_005045658.1 1238207 R 720554 CDS YP_005045659.1 374295468 11561427 1239721..1240380 1 NC_016627.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; peroxiredoxin 1240380 11561427 Clocl_1058 Clostridium clariflavum DSM 19732 peroxiredoxin YP_005045659.1 1239721 D 720554 CDS YP_005045660.1 374295469 11561428 complement(1240467..1241183) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 1241183 11561428 Clocl_1059 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005045660.1 1240467 R 720554 CDS YP_005045661.1 374295470 11561430 1243291..1246149 1 NC_016627.1 PFAM: Dockerin type I repeat; CotH protein; dockerin-like protein 1246149 11561430 Clocl_1061 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005045661.1 1243291 D 720554 CDS YP_005045662.1 374295471 11561431 1246214..1246999 1 NC_016627.1 PFAM: VTC domain; VTC domain-containing protein 1246999 11561431 Clocl_1062 Clostridium clariflavum DSM 19732 VTC domain-containing protein YP_005045662.1 1246214 D 720554 CDS YP_005045663.1 374295472 11561432 1246951..1247631 1 NC_016627.1 hypothetical protein 1247631 11561432 Clocl_1063 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045663.1 1246951 D 720554 CDS YP_005045664.1 374295473 11561433 complement(1247711..1248208) 1 NC_016627.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1248208 11561433 Clocl_1064 Clostridium clariflavum DSM 19732 prepilin-type N-terminal cleavage/methylation domain-containing protein YP_005045664.1 1247711 R 720554 CDS YP_005045665.1 374295474 11561435 complement(1250322..1251158) 1 NC_016627.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form; S-adenosylmethionine decarboxylase 1251158 11561435 Clocl_1066 Clostridium clariflavum DSM 19732 S-adenosylmethionine decarboxylase YP_005045665.1 1250322 R 720554 CDS YP_005045666.1 374295475 11561436 1251501..1252460 1 NC_016627.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; lactate dehydrogenase-like oxidoreductase 1252460 11561436 Clocl_1067 Clostridium clariflavum DSM 19732 lactate dehydrogenase-like oxidoreductase YP_005045666.1 1251501 D 720554 CDS YP_005045667.1 374295476 11561437 1253098..1253967 1 NC_016627.1 PFAM: S-adenosylmethionine-dependent methyltransferase; putative SAM-dependent methyltransferase 1253967 11561437 Clocl_1068 Clostridium clariflavum DSM 19732 putative SAM-dependent methyltransferase YP_005045667.1 1253098 D 720554 CDS YP_005045668.1 374295477 11561438 1253967..1254695 1 NC_016627.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; 23S RNA-specific pseudouridylate synthase 1254695 11561438 Clocl_1069 Clostridium clariflavum DSM 19732 23S RNA-specific pseudouridylate synthase YP_005045668.1 1253967 D 720554 CDS YP_005045669.1 374295478 11561439 complement(1254901..1256523) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 1256523 11561439 Clocl_1070 Clostridium clariflavum DSM 19732 transposase YP_005045669.1 1254901 R 720554 CDS YP_005045670.1 374295479 11561440 complement(1256671..1261902) 1 NC_016627.1 PFAM: Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; large extracellular alpha-helical protein 1261902 11561440 Clocl_1071 Clostridium clariflavum DSM 19732 large extracellular alpha-helical protein YP_005045670.1 1256671 R 720554 CDS YP_005045671.1 374295480 11561441 complement(1262009..1262530) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02954 family; RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 1262530 11561441 Clocl_1072 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005045671.1 1262009 R 720554 CDS YP_005045672.1 374295481 11561442 1262773..1264218 1 NC_016627.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 1264218 11561442 Clocl_1073 Clostridium clariflavum DSM 19732 glycogen/starch synthase YP_005045672.1 1262773 D 720554 CDS YP_005045673.1 374295482 11561443 complement(1264349..1265296) 1 NC_016627.1 PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal; putative oxidoreductase, aryl-alcohol dehydrogenase like protein 1265296 11561443 Clocl_1074 Clostridium clariflavum DSM 19732 putative oxidoreductase, aryl-alcohol dehydrogenase like protein YP_005045673.1 1264349 R 720554 CDS YP_005045674.1 374295483 11561444 1265515..1266861 1 NC_016627.1 PFAM: Protein of unknown function (DUF815); putative ATPase (AAA+ superfamily) 1266861 11561444 Clocl_1075 Clostridium clariflavum DSM 19732 putative ATPase (AAA+ superfamily) YP_005045674.1 1265515 D 720554 CDS YP_005045675.1 374295484 11561445 1267128..1267712 1 NC_016627.1 hypothetical protein 1267712 11561445 Clocl_1076 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045675.1 1267128 D 720554 CDS YP_005045676.1 374295485 11561446 1267975..1269183 1 NC_016627.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, eukaryotic type; isocitrate dehydrogenase 1269183 11561446 Clocl_1077 Clostridium clariflavum DSM 19732 isocitrate dehydrogenase YP_005045676.1 1267975 D 720554 CDS YP_005045677.1 374295486 11561447 1269324..1270061 1 NC_016627.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; pseudouridylate synthase I 1270061 11561447 Clocl_1078 Clostridium clariflavum DSM 19732 pseudouridylate synthase I YP_005045677.1 1269324 D 720554 CDS YP_005045678.1 374295487 11561448 1270189..1270695 1 NC_016627.1 PFAM: SEC-C motif; hypothetical protein 1270695 11561448 Clocl_1079 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045678.1 1270189 D 720554 CDS YP_005045679.1 374295488 11561449 1270710..1270997 1 NC_016627.1 hypothetical protein 1270997 11561449 Clocl_1080 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045679.1 1270710 D 720554 CDS YP_005045680.1 374295489 11561450 complement(1271171..1273060) 1 NC_016627.1 PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily 1273060 11561450 Clocl_1081 Clostridium clariflavum DSM 19732 phosphoglycerol transferase family protein, alkaline phosphatase superfamily YP_005045680.1 1271171 R 720554 CDS YP_005045681.1 374295490 11561451 1273646..1273981 1 NC_016627.1 hypothetical protein 1273981 11561451 Clocl_1082 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045681.1 1273646 D 720554 CDS YP_005045682.1 374295491 11561452 complement(1274080..1274805) 1 NC_016627.1 PFAM: Protein of unknown function DUF45; putative metal-dependent hydrolase 1274805 11561452 Clocl_1083 Clostridium clariflavum DSM 19732 putative metal-dependent hydrolase YP_005045682.1 1274080 R 720554 CDS YP_005045683.1 374295492 11561453 1275014..1275352 1 NC_016627.1 hypothetical protein 1275352 11561453 Clocl_1084 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045683.1 1275014 D 720554 CDS YP_005045684.1 374295493 11561454 1275349..1275822 1 NC_016627.1 hypothetical protein 1275822 11561454 Clocl_1085 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045684.1 1275349 D 720554 CDS YP_005045685.1 374295494 11561455 1276173..1277615 1 NC_016627.1 hypothetical protein 1277615 11561455 Clocl_1086 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045685.1 1276173 D 720554 CDS YP_005045686.1 374295495 11561456 1277726..1278421 1 NC_016627.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl cis-trans isomerase 1278421 11561456 Clocl_1087 Clostridium clariflavum DSM 19732 peptidyl-prolyl cis-trans isomerase YP_005045686.1 1277726 D 720554 CDS YP_005045687.1 374295496 11561457 1278608..1279621 1 NC_016627.1 PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type; aspartate-ammonia ligase 1279621 11561457 Clocl_1088 Clostridium clariflavum DSM 19732 aspartate-ammonia ligase YP_005045687.1 1278608 D 720554 CDS YP_005045688.1 374295497 11561458 1279935..1281422 1 NC_016627.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase 1281422 11561458 Clocl_1089 Clostridium clariflavum DSM 19732 asparaginyl-tRNA synthetase YP_005045688.1 1279935 D 720554 CDS YP_005045689.1 374295498 11561459 1281640..1283394 1 NC_016627.1 PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 1283394 11561459 Clocl_1090 Clostridium clariflavum DSM 19732 pyruvate kinase YP_005045689.1 1281640 D 720554 CDS YP_005045690.1 374295499 11561460 1283421..1284176 1 NC_016627.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease III 1284176 11561460 Clocl_1091 Clostridium clariflavum DSM 19732 exodeoxyribonuclease III YP_005045690.1 1283421 D 720554 CDS YP_005045691.1 374295500 11561461 1284321..1284653 1 NC_016627.1 hypothetical protein 1284653 11561461 Clocl_1092 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045691.1 1284321 D 720554 CDS YP_005045692.1 374295501 11561462 1284825..1285295 1 NC_016627.1 PFAM: PspC domain; manually curated; putative stress-responsive transcriptional regulator 1285295 11561462 Clocl_1093 Clostridium clariflavum DSM 19732 putative stress-responsive transcriptional regulator YP_005045692.1 1284825 D 720554 CDS YP_005045693.1 374295502 11561463 1285292..1286251 1 NC_016627.1 manually curated; hypothetical protein 1286251 11561463 Clocl_1094 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045693.1 1285292 D 720554 CDS YP_005045694.1 374295503 11561464 1286569..1288125 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain S-box 1288125 11561464 Clocl_1095 Clostridium clariflavum DSM 19732 PAS domain S-box YP_005045694.1 1286569 D 720554 CDS YP_005045695.1 374295504 11561465 complement(1288118..1288585) 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 1288585 11561465 Clocl_1096 Clostridium clariflavum DSM 19732 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005045695.1 1288118 R 720554 CDS YP_005045696.1 374295505 11561466 complement(1288675..1290987) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; chemotaxis protein histidine kinase-like protein 1290987 11561466 Clocl_1097 Clostridium clariflavum DSM 19732 chemotaxis protein histidine kinase-like protein YP_005045696.1 1288675 R 720554 CDS YP_005045697.1 374295506 11561467 1291295..1291675 1 NC_016627.1 gas vesicle protein 1291675 11561467 Clocl_1098 Clostridium clariflavum DSM 19732 gas vesicle protein YP_005045697.1 1291295 D 720554 CDS YP_005045698.1 374295507 11561468 1291785..1292183 1 NC_016627.1 hypothetical protein 1292183 11561468 Clocl_1099 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045698.1 1291785 D 720554 CDS YP_005045699.1 374295508 11561469 complement(1292220..1292429) 1 NC_016627.1 hypothetical protein 1292429 11561469 Clocl_1100 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045699.1 1292220 R 720554 CDS YP_005045700.1 374295509 11561470 1292785..1293303 1 NC_016627.1 hypothetical protein 1293303 11561470 Clocl_1101 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045700.1 1292785 D 720554 CDS YP_005045701.1 374295510 11561471 complement(1293323..1293778) 1 NC_016627.1 PFAM: CheW-like domain; chemotaxis signal transduction protein 1293778 11561471 Clocl_1102 Clostridium clariflavum DSM 19732 chemotaxis signal transduction protein YP_005045701.1 1293323 R 720554 CDS YP_005045702.1 374295511 11561472 complement(1294112..1295317) 1 NC_016627.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; glutamate N-acetyltransferase 1295317 11561472 Clocl_1103 Clostridium clariflavum DSM 19732 glutamate N-acetyltransferase YP_005045702.1 1294112 R 720554 CDS YP_005045703.1 374295512 11561473 1295961..1298396 1 NC_016627.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent protease La 1298396 11561473 Clocl_1104 Clostridium clariflavum DSM 19732 ATP-dependent protease La YP_005045703.1 1295961 D 720554 CDS YP_005045704.1 374295513 11561474 complement(1298481..1299026) 1 NC_016627.1 hypothetical protein 1299026 11561474 Clocl_1105 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045704.1 1298481 R 720554 CDS YP_005045705.1 374295514 11561475 1299349..1300608 1 NC_016627.1 hypothetical protein 1300608 11561475 Clocl_1106 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045705.1 1299349 D 720554 CDS YP_005045706.1 374295515 11561476 1300715..1301956 1 NC_016627.1 PFAM: PRC-barrel domain; manually curated; hypothetical protein 1301956 11561476 Clocl_1107 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045706.1 1300715 D 720554 CDS YP_005045707.1 374295516 11561477 1301972..1303309 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; VanW like protein; G5 domain; putative vancomycin resistance protein 1303309 11561477 Clocl_1108 Clostridium clariflavum DSM 19732 putative vancomycin resistance protein YP_005045707.1 1301972 D 720554 CDS YP_005045708.1 374295517 11561478 complement(1303386..1304012) 1 NC_016627.1 PFAM: Negative regulator of genetic competence (MecA); negative regulator of genetic competence, sporulation and motility 1304012 11561478 Clocl_1109 Clostridium clariflavum DSM 19732 negative regulator of genetic competence, sporulation and motility YP_005045708.1 1303386 R 720554 CDS YP_005045709.1 374295518 11561479 1304390..1305316 1 NC_016627.1 hypothetical protein 1305316 11561479 Clocl_1110 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045709.1 1304390 D 720554 CDS YP_005045710.1 374295519 11561480 1305544..1306128 1 NC_016627.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; MAF protein 1306128 11561480 Clocl_1111 Clostridium clariflavum DSM 19732 MAF protein YP_005045710.1 1305544 D 720554 CDS YP_005045711.1 374295520 11561481 1306230..1307252 1 NC_016627.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB 1307252 11561481 Clocl_1112 Clostridium clariflavum DSM 19732 rod shape-determining protein MreB YP_005045711.1 1306230 D 720554 CDS YP_005045712.1 374295521 11561482 1307270..1308130 1 NC_016627.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; manually curated; rod shape-determining protein MreC 1308130 11561482 Clocl_1113 Clostridium clariflavum DSM 19732 rod shape-determining protein MreC YP_005045712.1 1307270 D 720554 CDS YP_005045713.1 374295522 11561483 1308127..1308642 1 NC_016627.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; rod shape-determining protein MreD 1308642 11561483 Clocl_1114 Clostridium clariflavum DSM 19732 rod shape-determining protein MreD YP_005045713.1 1308127 D 720554 CDS YP_005045714.1 374295523 11561484 1308751..1310874 1 NC_016627.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; penicillin-binding protein 2 1310874 11561484 Clocl_1115 Clostridium clariflavum DSM 19732 penicillin-binding protein 2 YP_005045714.1 1308751 D 720554 CDS YP_005045715.1 374295524 11561485 1310902..1311582 1 NC_016627.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC; septum site-determining protein MinC 1311582 11561485 Clocl_1116 Clostridium clariflavum DSM 19732 septum site-determining protein MinC YP_005045715.1 1310902 D 720554 CDS YP_005045716.1 374295525 11561486 1311858..1312658 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD; septum site-determining protein MinD 1312658 11561486 Clocl_1117 Clostridium clariflavum DSM 19732 septum site-determining protein MinD YP_005045716.1 1311858 D 720554 CDS YP_005045717.1 374295526 11561487 1312673..1312957 1 NC_016627.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; cell division topological specificity factor MinE 1312957 11561487 Clocl_1118 Clostridium clariflavum DSM 19732 cell division topological specificity factor MinE YP_005045717.1 1312673 D 720554 CDS YP_005045718.1 374295527 11561488 1313043..1313438 1 NC_016627.1 PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase; methylglyoxal synthase 1313438 11561488 Clocl_1119 Clostridium clariflavum DSM 19732 methylglyoxal synthase YP_005045718.1 1313043 D 720554 CDS YP_005045719.1 374295528 11561489 1313717..1314670 1 NC_016627.1 PFAM: Peptidase family M23; metalloendopeptidase-like membrane protein 1314670 11561489 Clocl_1120 Clostridium clariflavum DSM 19732 metalloendopeptidase-like membrane protein YP_005045719.1 1313717 D 720554 CDS YP_005045720.1 374295529 11561490 1314841..1315650 1 NC_016627.1 PFAM: Peptidase family M50; Zn-dependent protease 1315650 11561490 Clocl_1121 Clostridium clariflavum DSM 19732 Zn-dependent protease YP_005045720.1 1314841 D 720554 CDS YP_005045721.1 374295530 11561491 1315788..1317401 1 NC_016627.1 PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; endoglucanase 1317401 11561491 Clocl_1122 Clostridium clariflavum DSM 19732 endoglucanase YP_005045721.1 1315788 D 720554 CDS YP_005045722.1 374295531 11561492 1317485..1317874 1 NC_016627.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme 1317874 11561492 Clocl_1123 Clostridium clariflavum DSM 19732 secondary thiamine-phosphate synthase enzyme YP_005045722.1 1317485 D 720554 CDS YP_005045723.1 374295532 11561493 1318278..1319351 1 NC_016627.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase 1319351 11561493 Clocl_1124 Clostridium clariflavum DSM 19732 diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_005045723.1 1318278 D 720554 CDS YP_005045724.1 374295533 11561494 1319420..1320076 1 NC_016627.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 1320076 11561494 Clocl_1125 Clostridium clariflavum DSM 19732 riboflavin synthase subunit alpha YP_005045724.1 1319420 D 720554 CDS YP_005045725.1 374295534 11561495 1320167..1321369 1 NC_016627.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase 1321369 11561495 Clocl_1126 Clostridium clariflavum DSM 19732 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005045725.1 1320167 D 720554 CDS YP_005045726.1 374295535 11561496 1321415..1321882 1 NC_016627.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1321882 11561496 Clocl_1127 Clostridium clariflavum DSM 19732 6,7-dimethyl-8-ribityllumazine synthase YP_005045726.1 1321415 D 720554 CDS YP_005045727.1 374295536 11561497 complement(1321974..1322597) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 1322597 11561497 Clocl_1128 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005045727.1 1321974 R 720554 CDS YP_005045728.1 374295537 11561500 1323365..1324297 1 NC_016627.1 PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; Hpr(Ser) kinase/phosphatase 1324297 11561500 Clocl_1131 Clostridium clariflavum DSM 19732 Hpr(Ser) kinase/phosphatase YP_005045728.1 1323365 D 720554 CDS YP_005045729.1 374295538 11561501 1324313..1325038 1 NC_016627.1 PFAM: PHP domain; PHP family phosphohydrolase, histidinol phosphatase 1325038 11561501 Clocl_1132 Clostridium clariflavum DSM 19732 PHP family phosphohydrolase, histidinol phosphatase YP_005045729.1 1324313 D 720554 CDS YP_005045730.1 374295539 11561502 1325115..1326029 1 NC_016627.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylmuramate dehydrogenase 1326029 11561502 Clocl_1133 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramate dehydrogenase YP_005045730.1 1325115 D 720554 CDS YP_005045731.1 374295540 11561503 1326082..1326954 1 NC_016627.1 PFAM: P-loop ATPase protein family; putative P-loop-containing kinase 1326954 11561503 Clocl_1134 Clostridium clariflavum DSM 19732 putative P-loop-containing kinase YP_005045731.1 1326082 D 720554 CDS YP_005045732.1 374295541 11561504 1326954..1328210 1 NC_016627.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related; hypothetical protein 1328210 11561504 Clocl_1135 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045732.1 1326954 D 720554 CDS YP_005045733.1 374295542 11561505 1328310..1330283 1 NC_016627.1 PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; TIGRFAM: glycogen debranching enzyme, archaeal type, putative; glycogen debranching enzyme, putative 1330283 11561505 Clocl_1136 Clostridium clariflavum DSM 19732 glycogen debranching enzyme, putative YP_005045733.1 1328310 D 720554 CDS YP_005045734.1 374295543 11561506 1330368..1331321 1 NC_016627.1 PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein; hypothetical protein 1331321 11561506 Clocl_1137 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045734.1 1330368 D 720554 CDS YP_005045735.1 374295544 11561507 1331322..1331585 1 NC_016627.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system HPr (HPr) family protein 1331585 11561507 Clocl_1138 Clostridium clariflavum DSM 19732 phosphotransferase system HPr (HPr) family protein YP_005045735.1 1331322 D 720554 CDS YP_005045736.1 374295545 11561508 1331899..1332234 1 NC_016627.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist; anti-sigma F factor antagonist 1332234 11561508 Clocl_1139 Clostridium clariflavum DSM 19732 anti-sigma F factor antagonist YP_005045736.1 1331899 D 720554 CDS YP_005045737.1 374295546 11561509 1332247..1332684 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor; anti-sigma F factor 1332684 11561509 Clocl_1140 Clostridium clariflavum DSM 19732 anti-sigma F factor YP_005045737.1 1332247 D 720554 CDS YP_005045738.1 374295547 11561510 1332970..1333716 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-F factor; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; manually curated; RNA polymerase sigma-subunit RpoX/SigF 1333716 11561510 Clocl_1141 Clostridium clariflavum DSM 19732 RNA polymerase sigma-subunit RpoX/SigF YP_005045738.1 1332970 D 720554 CDS YP_005045739.1 374295548 11561511 1334149..1334592 1 NC_016627.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC; stage V sporulation protein AC 1334592 11561511 Clocl_1142 Clostridium clariflavum DSM 19732 stage V sporulation protein AC YP_005045739.1 1334149 D 720554 CDS YP_005045740.1 374295549 11561512 1334602..1335621 1 NC_016627.1 PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD; stage V sporulation protein AD 1335621 11561512 Clocl_1143 Clostridium clariflavum DSM 19732 stage V sporulation protein AD YP_005045740.1 1334602 D 720554 CDS YP_005045741.1 374295550 11561513 1335773..1336144 1 NC_016627.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE; stage V sporulation protein AE 1336144 11561513 Clocl_1144 Clostridium clariflavum DSM 19732 stage V sporulation protein AE YP_005045741.1 1335773 D 720554 CDS YP_005045742.1 374295551 11561514 1336158..1336721 1 NC_016627.1 hypothetical protein 1336721 11561514 Clocl_1145 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045742.1 1336158 D 720554 CDS YP_005045743.1 374295552 11561516 1338626..1339090 1 NC_016627.1 PFAM: CheC-like family; putative inhibitor of MCP methylation, CheC 1339090 11561516 Clocl_1147 Clostridium clariflavum DSM 19732 putative inhibitor of MCP methylation, CheC YP_005045743.1 1338626 D 720554 CDS YP_005045744.1 374295553 11561517 1339335..1339829 1 NC_016627.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; rRNA methylase, putative, group 2 1339829 11561517 Clocl_1148 Clostridium clariflavum DSM 19732 rRNA methylase, putative, group 2 YP_005045744.1 1339335 D 720554 CDS YP_005045745.1 374295554 11561518 1339875..1340987 1 NC_016627.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein; peptidase T-like protein 1340987 11561518 Clocl_1149 Clostridium clariflavum DSM 19732 peptidase T-like protein YP_005045745.1 1339875 D 720554 CDS YP_005045746.1 374295555 11561519 1341060..1342145 1 NC_016627.1 PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase; 6-phosphofructokinase 1342145 11561519 Clocl_1150 Clostridium clariflavum DSM 19732 6-phosphofructokinase YP_005045746.1 1341060 D 720554 CDS YP_005045747.1 374295556 11561520 1342172..1343071 1 NC_016627.1 PFAM: Uncharacterized conserved protein (DUF2156); hypothetical protein 1343071 11561520 Clocl_1151 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045747.1 1342172 D 720554 CDS YP_005045748.1 374295557 11561521 1343435..1344445 1 NC_016627.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type I 1344445 11561521 Clocl_1152 Clostridium clariflavum DSM 19732 glyceraldehyde-3-phosphate dehydrogenase, type I YP_005045748.1 1343435 D 720554 CDS YP_005045749.1 374295558 11561522 1344526..1345719 1 NC_016627.1 PFAM: Phosphoglycerate kinase; 3-phosphoglycerate kinase 1345719 11561522 Clocl_1153 Clostridium clariflavum DSM 19732 3-phosphoglycerate kinase YP_005045749.1 1344526 D 720554 CDS YP_005045750.1 374295559 11561523 1345739..1346494 1 NC_016627.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 1346494 11561523 Clocl_1154 Clostridium clariflavum DSM 19732 triosephosphate isomerase YP_005045750.1 1345739 D 720554 CDS YP_005045751.1 374295560 11561524 1346674..1348212 1 NC_016627.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1348212 11561524 Clocl_1155 Clostridium clariflavum DSM 19732 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_005045751.1 1346674 D 720554 CDS YP_005045752.1 374295561 11561525 1348415..1349347 1 NC_016627.1 hypothetical protein 1349347 11561525 Clocl_1156 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045752.1 1348415 D 720554 CDS YP_005045753.1 374295562 11561526 1349492..1355887 1 NC_016627.1 PFAM: F5/8 type C domain; Dockerin type I repeat; RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; intein N-terminal splicing region; YD repeat (two copies); RHS repeat-associated core domain-containing protein 1355887 11561526 Clocl_1157 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005045753.1 1349492 D 720554 CDS YP_005045754.1 374295563 11561527 1355927..1356406 1 NC_016627.1 manually curated; hypothetical protein 1356406 11561527 Clocl_1158 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045754.1 1355927 D 720554 CDS YP_005045755.1 374295564 11561528 1356773..1357279 1 NC_016627.1 hypothetical protein 1357279 11561528 Clocl_1159 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045755.1 1356773 D 720554 CDS YP_005045756.1 374295565 11561530 1357825..1358370 1 NC_016627.1 hypothetical protein 1358370 11561530 Clocl_1161 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045756.1 1357825 D 720554 CDS YP_005045757.1 374295566 11561532 1359868..1360305 1 NC_016627.1 hypothetical protein 1360305 11561532 Clocl_1163 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045757.1 1359868 D 720554 CDS YP_005045758.1 374295567 11561534 1361278..1361532 1 NC_016627.1 PFAM: Domain of unknown function (DUF1871); hypothetical protein 1361532 11561534 Clocl_1165 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045758.1 1361278 D 720554 CDS YP_005045759.1 374295568 11561535 1361789..1361923 1 NC_016627.1 TIGRFAM: YD repeat (two copies); hypothetical protein 1361923 11561535 Clocl_1166 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045759.1 1361789 D 720554 CDS YP_005045760.1 374295569 11561536 1361954..1362274 1 NC_016627.1 hypothetical protein 1362274 11561536 Clocl_1167 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045760.1 1361954 D 720554 CDS YP_005045761.1 374295570 11561537 1362297..1362386 1 NC_016627.1 hypothetical protein 1362386 11561537 Clocl_1168 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045761.1 1362297 D 720554 CDS YP_005045762.1 374295571 11561538 1362425..1362652 1 NC_016627.1 hypothetical protein 1362652 11561538 Clocl_1169 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045762.1 1362425 D 720554 CDS YP_005045763.1 374295572 11561539 1362828..1363217 1 NC_016627.1 hypothetical protein 1363217 11561539 Clocl_1170 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045763.1 1362828 D 720554 CDS YP_005045764.1 374295573 11561542 1364052..1364324 1 NC_016627.1 hypothetical protein 1364324 11561542 Clocl_1173 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045764.1 1364052 D 720554 CDS YP_005045765.1 374295574 11561543 1364324..1364698 1 NC_016627.1 manually curated; hypothetical protein 1364698 11561543 Clocl_1174 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045765.1 1364324 D 720554 CDS YP_005045766.1 374295575 11561544 1364829..1365218 1 NC_016627.1 hypothetical protein 1365218 11561544 Clocl_1175 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045766.1 1364829 D 720554 CDS YP_005045767.1 374295576 11561547 1366761..1367564 1 NC_016627.1 hypothetical protein 1367564 11561547 Clocl_1178 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045767.1 1366761 D 720554 CDS YP_005045768.1 374295577 11561549 1368370..1368810 1 NC_016627.1 hypothetical protein 1368810 11561549 Clocl_1180 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045768.1 1368370 D 720554 CDS YP_005045769.1 374295578 11561552 complement(1369924..1371141) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 1371141 11561552 Clocl_1183 Clostridium clariflavum DSM 19732 transposase YP_005045769.1 1369924 R 720554 CDS YP_005045770.1 374295579 11561554 complement(1371971..1372192) 1 NC_016627.1 hypothetical protein 1372192 11561554 Clocl_1185 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045770.1 1371971 R 720554 CDS YP_005045771.1 374295580 11561555 complement(1373096..1374487) 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 1374487 11561555 Clocl_1186 Clostridium clariflavum DSM 19732 transposase family protein YP_005045771.1 1373096 R 720554 CDS YP_005045772.1 374295581 11561556 complement(1374610..1375056) 1 NC_016627.1 hypothetical protein 1375056 11561556 Clocl_1187 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045772.1 1374610 R 720554 CDS YP_005045773.1 374295582 11561557 complement(1375166..1375627) 1 NC_016627.1 PFAM: GtrA-like protein; GtrA-like protein 1375627 11561557 Clocl_1188 Clostridium clariflavum DSM 19732 GtrA-like protein YP_005045773.1 1375166 R 720554 CDS YP_005045774.1 374295583 11561558 1375919..1376161 1 NC_016627.1 hypothetical protein 1376161 11561558 Clocl_1189 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045774.1 1375919 D 720554 CDS YP_005045775.1 374295584 11561559 1376267..1377358 1 NC_016627.1 PFAM: Domain of unknown function (DUF362); hypothetical protein 1377358 11561559 Clocl_1190 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045775.1 1376267 D 720554 CDS YP_005045776.1 374295585 11561560 1377387..1377758 1 NC_016627.1 hypothetical protein 1377758 11561560 Clocl_1191 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045776.1 1377387 D 720554 CDS YP_005045777.1 374295586 11561561 1378027..1378932 1 NC_016627.1 PFAM: Cellulose binding domain; Cellulose binding domain-containing protein 1378932 11561561 Clocl_1192 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein YP_005045777.1 1378027 D 720554 CDS YP_005045778.1 374295587 11561562 1379041..1380342 1 NC_016627.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; phosphopyruvate hydratase 1380342 11561562 Clocl_1193 Clostridium clariflavum DSM 19732 phosphopyruvate hydratase YP_005045778.1 1379041 D 720554 CDS YP_005045779.1 374295588 11561563 1380461..1380697 1 NC_016627.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; protein translocase, SecG subunit 1380697 11561563 Clocl_1194 Clostridium clariflavum DSM 19732 protein translocase, SecG subunit YP_005045779.1 1380461 D 720554 CDS YP_005045780.1 374295589 11561564 1380891..1381346 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 1381346 11561564 Clocl_1195 Clostridium clariflavum DSM 19732 transposase YP_005045780.1 1380891 D 720554 CDS YP_005045781.1 374295590 11561565 1381807..1382340 1 NC_016627.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein 1382340 11561565 Clocl_1196 Clostridium clariflavum DSM 19732 putative domain HDIG-containing protein YP_005045781.1 1381807 D 720554 CDS YP_005045782.1 374295591 11561566 1382529..1384889 1 NC_016627.1 PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; manually curated; RNAse R 1384889 11561566 Clocl_1197 Clostridium clariflavum DSM 19732 RNAse R YP_005045782.1 1382529 D 720554 CDS YP_005045783.1 374295592 11561567 1384957..1385442 1 NC_016627.1 PFAM: Protein of unknown function (DUF523); hypothetical protein 1385442 11561567 Clocl_1198 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045783.1 1384957 D 720554 CDS YP_005045784.1 374295593 11561568 complement(1385527..1385754) 1 NC_016627.1 PFAM: PTS HPr component phosphorylation site; HPr-related phosphotransferase system component 1385754 11561568 Clocl_1199 Clostridium clariflavum DSM 19732 HPr-related phosphotransferase system component YP_005045784.1 1385527 R 720554 CDS YP_005045785.1 374295594 11561569 1386089..1387396 1 NC_016627.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; MiaB-like tRNA modifying enzyme 1387396 11561569 Clocl_1200 Clostridium clariflavum DSM 19732 MiaB-like tRNA modifying enzyme YP_005045785.1 1386089 D 720554 CDS YP_005045786.1 374295595 11561570 1387578..1387847 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF965); hypothetical protein 1387847 11561570 Clocl_1201 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045786.1 1387578 D 720554 CDS YP_005045787.1 374295596 11561571 1388062..1389009 1 NC_016627.1 PFAM: Aldo/keto reductase family; manually curated; putative oxidoreductase, aryl-alcohol dehydrogenase like protein 1389009 11561571 Clocl_1202 Clostridium clariflavum DSM 19732 putative oxidoreductase, aryl-alcohol dehydrogenase like protein YP_005045787.1 1388062 D 720554 CDS YP_005045788.1 374295597 11561572 1389139..1389564 1 NC_016627.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; RNAse H-fold protein YqgF 1389564 11561572 Clocl_1203 Clostridium clariflavum DSM 19732 RNAse H-fold protein YqgF YP_005045788.1 1389139 D 720554 CDS YP_005045789.1 374295598 11561573 1389748..1390032 1 NC_016627.1 PFAM: Protein of unknown function (DUF1292); hypothetical protein 1390032 11561573 Clocl_1204 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045789.1 1389748 D 720554 CDS YP_005045790.1 374295599 11561574 1390313..1391413 1 NC_016627.1 PFAM: Protein of unknown function (DUF3048); hypothetical protein 1391413 11561574 Clocl_1205 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045790.1 1390313 D 720554 CDS YP_005045791.1 374295600 11561575 1391725..1393566 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; radical SAM family protein 1393566 11561575 Clocl_1206 Clostridium clariflavum DSM 19732 radical SAM family protein YP_005045791.1 1391725 D 720554 CDS YP_005045792.1 374295601 11561576 1393559..1394374 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2344); TIGRFAM: radical SAM-linked protein; radical SAM-linked protein 1394374 11561576 Clocl_1207 Clostridium clariflavum DSM 19732 radical SAM-linked protein YP_005045792.1 1393559 D 720554 CDS YP_005045793.1 374295602 11561577 1394384..1395880 1 NC_016627.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; RNAse G 1395880 11561577 Clocl_1208 Clostridium clariflavum DSM 19732 RNAse G YP_005045793.1 1394384 D 720554 CDS YP_005045794.1 374295603 11561578 1395977..1396288 1 NC_016627.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21P 1396288 11561578 Clocl_1209 Clostridium clariflavum DSM 19732 50S ribosomal protein L21P YP_005045794.1 1395977 D 720554 CDS YP_005045795.1 374295604 11561579 1396303..1396632 1 NC_016627.1 PFAM: Protein of unknown function (DUF464); putative ribosomal protein 1396632 11561579 Clocl_1210 Clostridium clariflavum DSM 19732 putative ribosomal protein YP_005045795.1 1396303 D 720554 CDS YP_005045796.1 374295605 11561580 1396636..1396914 1 NC_016627.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27P 1396914 11561580 Clocl_1211 Clostridium clariflavum DSM 19732 50S ribosomal protein L27P YP_005045796.1 1396636 D 720554 CDS YP_005045797.1 374295606 11561581 1397175..1398449 1 NC_016627.1 PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain; Obg family GTPase CgtA 1398449 11561581 Clocl_1212 Clostridium clariflavum DSM 19732 Obg family GTPase CgtA YP_005045797.1 1397175 D 720554 CDS YP_005045798.1 374295607 11561582 1398636..1398824 1 NC_016627.1 hypothetical protein 1398824 11561582 Clocl_1213 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045798.1 1398636 D 720554 CDS YP_005045799.1 374295608 11561583 1398983..1399273 1 NC_016627.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family; putative RNA-binding protein, YhbY family 1399273 11561583 Clocl_1214 Clostridium clariflavum DSM 19732 putative RNA-binding protein, YhbY family YP_005045799.1 1398983 D 720554 CDS YP_005045800.1 374295609 11561584 complement(1399348..1399884) 1 NC_016627.1 hypothetical protein 1399884 11561584 Clocl_1215 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045800.1 1399348 R 720554 CDS YP_005045801.1 374295610 11561585 1400187..1400870 1 NC_016627.1 TIGRFAM: iron-sulfur cluster binding protein, putative; hypothetical protein 1400870 11561585 Clocl_1216 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045801.1 1400187 D 720554 CDS YP_005045802.1 374295611 11561586 1401064..1401537 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 1401537 11561586 Clocl_1217 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005045802.1 1401064 D 720554 CDS YP_005045803.1 374295612 11561587 1401935..1403821 1 NC_016627.1 PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily 1403821 11561587 Clocl_1218 Clostridium clariflavum DSM 19732 phosphoglycerol transferase family protein, alkaline phosphatase superfamily YP_005045803.1 1401935 D 720554 CDS YP_005045804.1 374295613 11561588 1404350..1405480 1 NC_016627.1 PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase 1405480 11561588 Clocl_1219 Clostridium clariflavum DSM 19732 putative xylanase/chitin deacetylase YP_005045804.1 1404350 D 720554 CDS YP_005045805.1 374295614 11561589 1405846..1406127 1 NC_016627.1 manually curated; hypothetical protein 1406127 11561589 Clocl_1220 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045805.1 1405846 D 720554 CDS YP_005045806.1 374295615 11561590 1406337..1406516 1 NC_016627.1 hypothetical protein 1406516 11561590 Clocl_1221 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045806.1 1406337 D 720554 CDS YP_005045807.1 374295616 11561591 complement(1406587..1407972) 1 NC_016627.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 1407972 11561591 Clocl_1222 Clostridium clariflavum DSM 19732 argininosuccinate lyase YP_005045807.1 1406587 R 720554 CDS YP_005045808.1 374295617 11561592 complement(1407983..1409200) 1 NC_016627.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 1409200 11561592 Clocl_1223 Clostridium clariflavum DSM 19732 argininosuccinate synthase YP_005045808.1 1407983 R 720554 CDS YP_005045809.1 374295618 11561593 1409354..1409848 1 NC_016627.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Holliday junction endonuclease RuvC 1409848 11561593 Clocl_1224 Clostridium clariflavum DSM 19732 Holliday junction endonuclease RuvC YP_005045809.1 1409354 D 720554 CDS YP_005045810.1 374295619 11561594 1410020..1410628 1 NC_016627.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase subunit RuvA 1410628 11561594 Clocl_1225 Clostridium clariflavum DSM 19732 Holliday junction DNA helicase subunit RuvA YP_005045810.1 1410020 D 720554 CDS YP_005045811.1 374295620 11561595 1410766..1411758 1 NC_016627.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase subunit RuvB 1411758 11561595 Clocl_1226 Clostridium clariflavum DSM 19732 Holliday junction DNA helicase subunit RuvB YP_005045811.1 1410766 D 720554 CDS YP_005045812.1 374295621 11561596 1412114..1413214 1 NC_016627.1 PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 1413214 11561596 Clocl_1227 Clostridium clariflavum DSM 19732 type IV pilus assembly protein PilM YP_005045812.1 1412114 D 720554 CDS YP_005045813.1 374295622 11561597 1413701..1416592 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; N-acetylmuramoyl-L-alanine amidase 1416592 11561597 Clocl_1228 Clostridium clariflavum DSM 19732 N-acetylmuramoyl-L-alanine amidase YP_005045813.1 1413701 D 720554 CDS YP_005045814.1 374295623 11561598 1416799..1417788 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose-4-epimerase 1417788 11561598 Clocl_1229 Clostridium clariflavum DSM 19732 UDP-glucose-4-epimerase YP_005045814.1 1416799 D 720554 CDS YP_005045815.1 374295624 11561599 1417910..1419067 1 NC_016627.1 PFAM: Sporulation and spore germination; spore germination protein 1419067 11561599 Clocl_1230 Clostridium clariflavum DSM 19732 spore germination protein YP_005045815.1 1417910 D 720554 CDS YP_005045816.1 374295625 11561600 1419299..1420081 1 NC_016627.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; ribonuclease PH 1420081 11561600 Clocl_1231 Clostridium clariflavum DSM 19732 ribonuclease PH YP_005045816.1 1419299 D 720554 CDS YP_005045817.1 374295626 11561601 1420020..1420664 1 NC_016627.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1420664 11561601 Clocl_1232 Clostridium clariflavum DSM 19732 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_005045817.1 1420020 D 720554 CDS YP_005045818.1 374295627 11561604 1421701..1421979 1 NC_016627.1 PFAM: Protein of unknown function (DUF1294); hypothetical protein 1421979 11561604 Clocl_1235 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045818.1 1421701 D 720554 CDS YP_005045819.1 374295628 11561605 1422034..1424103 1 NC_016627.1 hypothetical protein 1424103 11561605 Clocl_1236 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045819.1 1422034 D 720554 CDS YP_005045820.1 374295629 11561606 1424169..1426403 1 NC_016627.1 PFAM: UvrD/REP helicase; manually curated; DNA/RNA helicase 1426403 11561606 Clocl_1237 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005045820.1 1424169 D 720554 CDS YP_005045821.1 374295630 11561607 1426400..1427224 1 NC_016627.1 hypothetical protein 1427224 11561607 Clocl_1238 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045821.1 1426400 D 720554 CDS YP_005045822.1 374295631 11561608 1427225..1429516 1 NC_016627.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; putative exonuclease, RecJ 1429516 11561608 Clocl_1239 Clostridium clariflavum DSM 19732 putative exonuclease, RecJ YP_005045822.1 1427225 D 720554 CDS YP_005045823.1 374295632 11561609 complement(1429566..1430384) 1 NC_016627.1 PFAM: Protein phosphatase 2C; serine/threonine protein phosphatase 1430384 11561609 Clocl_1240 Clostridium clariflavum DSM 19732 serine/threonine protein phosphatase YP_005045823.1 1429566 R 720554 CDS YP_005045824.1 374295633 11561610 complement(1430397..1432397) 1 NC_016627.1 PFAM: Protein kinase domain; serine/threonine protein kinase 1432397 11561610 Clocl_1241 Clostridium clariflavum DSM 19732 serine/threonine protein kinase YP_005045824.1 1430397 R 720554 CDS YP_005045825.1 374295634 11561611 1433086..1434078 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type polysaccharide transport system, permease component 1434078 11561611 Clocl_1242 Clostridium clariflavum DSM 19732 ABC-type polysaccharide transport system, permease component YP_005045825.1 1433086 D 720554 CDS YP_005045826.1 374295635 11561612 1434144..1435070 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1435070 11561612 Clocl_1243 Clostridium clariflavum DSM 19732 carbohydrate ABC transporter membrane protein 2 YP_005045826.1 1434144 D 720554 CDS YP_005045827.1 374295636 11561613 1435148..1436707 1 NC_016627.1 PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 1436707 11561613 Clocl_1244 Clostridium clariflavum DSM 19732 carbohydrate ABC transporter substrate-binding protein YP_005045827.1 1435148 D 720554 CDS YP_005045828.1 374295637 11561614 1437067..1438194 1 NC_016627.1 PFAM: SEC-C motif; hypothetical protein 1438194 11561614 Clocl_1245 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045828.1 1437067 D 720554 CDS YP_005045829.1 374295638 11561615 1438497..1438736 1 NC_016627.1 PFAM: FeoA domain; Fe2+ transport system protein A 1438736 11561615 Clocl_1246 Clostridium clariflavum DSM 19732 Fe2+ transport system protein A YP_005045829.1 1438497 D 720554 CDS YP_005045830.1 374295639 11561616 1438884..1439927 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 1439927 11561616 Clocl_1247 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005045830.1 1438884 D 720554 CDS YP_005045831.1 374295640 11561617 complement(1439986..1441536) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 1441536 11561617 Clocl_1248 Clostridium clariflavum DSM 19732 transposase YP_005045831.1 1439986 R 720554 CDS YP_005045832.1 374295641 11561618 1441920..1443068 1 NC_016627.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: PAS domain S-box; PAS domain S-box 1443068 11561618 Clocl_1249 Clostridium clariflavum DSM 19732 PAS domain S-box YP_005045832.1 1441920 D 720554 CDS YP_005045833.1 374295642 11561619 1443142..1443351 1 NC_016627.1 PFAM: Rubrerythrin; rubrerythrin 1443351 11561619 Clocl_1250 Clostridium clariflavum DSM 19732 rubrerythrin YP_005045833.1 1443142 D 720554 CDS YP_005045834.1 374295643 11561620 1443606..1443914 1 NC_016627.1 hypothetical protein 1443914 11561620 Clocl_1251 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045834.1 1443606 D 720554 CDS YP_005045835.1 374295644 11561623 1446009..1447436 1 NC_016627.1 hypothetical protein 1447436 11561623 Clocl_1254 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045835.1 1446009 D 720554 CDS YP_005045836.1 374295645 11561624 1447472..1448455 1 NC_016627.1 PFAM: Tetratricopeptide repeat; cytochrome c biogenesis factor 1448455 11561624 Clocl_1255 Clostridium clariflavum DSM 19732 cytochrome c biogenesis factor YP_005045836.1 1447472 D 720554 CDS YP_005045837.1 374295646 11561625 complement(1448499..1449665) 1 NC_016627.1 PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain; ribulose 1,5-bisphosphate carboxylase, large subunit 1449665 11561625 Clocl_1256 Clostridium clariflavum DSM 19732 ribulose 1,5-bisphosphate carboxylase, large subunit YP_005045837.1 1448499 R 720554 CDS YP_005045838.1 374295647 11561626 complement(1449787..1450794) 1 NC_016627.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase 1450794 11561626 Clocl_1257 Clostridium clariflavum DSM 19732 transketolase YP_005045838.1 1449787 R 720554 CDS YP_005045839.1 374295648 11561627 complement(1450798..1451733) 1 NC_016627.1 PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 1451733 11561627 Clocl_1258 Clostridium clariflavum DSM 19732 transketolase YP_005045839.1 1450798 R 720554 CDS YP_005045840.1 374295649 11561628 1452688..1455348 1 NC_016627.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 1455348 11561628 Clocl_1259 Clostridium clariflavum DSM 19732 valyl-tRNA synthetase YP_005045840.1 1452688 D 720554 CDS YP_005045841.1 374295650 11561629 1455672..1456244 1 NC_016627.1 PFAM: ANTAR domain; response regulator with putative antiterminator output domain 1456244 11561629 Clocl_1260 Clostridium clariflavum DSM 19732 response regulator with putative antiterminator output domain YP_005045841.1 1455672 D 720554 CDS YP_005045842.1 374295651 11561630 1456741..1457562 1 NC_016627.1 PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; Mo-nitrogenase iron protein subunit NifH 1457562 11561630 Clocl_1261 Clostridium clariflavum DSM 19732 Mo-nitrogenase iron protein subunit NifH YP_005045842.1 1456741 D 720554 CDS YP_005045843.1 374295652 11561631 1457584..1457910 1 NC_016627.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII 1457910 11561631 Clocl_1262 Clostridium clariflavum DSM 19732 nitrogen regulatory protein PII YP_005045843.1 1457584 D 720554 CDS YP_005045844.1 374295653 11561632 1457924..1458307 1 NC_016627.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII 1458307 11561632 Clocl_1263 Clostridium clariflavum DSM 19732 nitrogen regulatory protein PII YP_005045844.1 1457924 D 720554 CDS YP_005045845.1 374295654 11561633 1458341..1459930 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase component I, alpha chain; nitrogenase molybdenum-iron protein alpha chain; Mo-nitrogenase MoFe protein subunit NifD precursor 1459930 11561633 Clocl_1264 Clostridium clariflavum DSM 19732 Mo-nitrogenase MoFe protein subunit NifD precursor YP_005045845.1 1458341 D 720554 CDS YP_005045846.1 374295655 11561634 1459960..1461321 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; Mo-nitrogenase MoFe protein subunit NifK 1461321 11561634 Clocl_1265 Clostridium clariflavum DSM 19732 Mo-nitrogenase MoFe protein subunit NifK YP_005045846.1 1459960 D 720554 CDS YP_005045847.1 374295656 11561635 1461655..1463016 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 1463016 11561635 Clocl_1266 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE YP_005045847.1 1461655 D 720554 CDS YP_005045848.1 374295657 11561636 1463013..1465715 1 NC_016627.1 PFAM: Radical SAM superfamily; Nitrogenase component 1 type Oxidoreductase; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 1465715 11561636 Clocl_1267 Clostridium clariflavum DSM 19732 nitrogenase cofactor biosynthesis protein NifB YP_005045848.1 1463013 D 720554 CDS YP_005045849.1 374295658 11561637 1465712..1466020 1 NC_016627.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; ferredoxin 1466020 11561637 Clocl_1268 Clostridium clariflavum DSM 19732 ferredoxin YP_005045849.1 1465712 D 720554 CDS YP_005045850.1 374295659 11561638 1466052..1467125 1 NC_016627.1 PFAM: HMGL-like; isopropylmalate/homocitrate/citramalate synthase 1467125 11561638 Clocl_1269 Clostridium clariflavum DSM 19732 isopropylmalate/homocitrate/citramalate synthase YP_005045850.1 1466052 D 720554 CDS YP_005045851.1 374295660 11561639 1467141..1467953 1 NC_016627.1 PFAM: HMGL-like; isopropylmalate/homocitrate/citramalate synthase 1467953 11561639 Clocl_1270 Clostridium clariflavum DSM 19732 isopropylmalate/homocitrate/citramalate synthase YP_005045851.1 1467141 D 720554 CDS YP_005045852.1 374295661 11561640 1468084..1470006 1 NC_016627.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD+ synthetase 1470006 11561640 Clocl_1271 Clostridium clariflavum DSM 19732 NAD+ synthetase YP_005045852.1 1468084 D 720554 CDS YP_005045853.1 374295662 11561641 1470737..1471954 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 1471954 11561641 Clocl_1272 Clostridium clariflavum DSM 19732 transposase YP_005045853.1 1470737 D 720554 CDS YP_005045854.1 374295663 11561642 complement(1472287..1473015) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 1473015 11561642 Clocl_1273 Clostridium clariflavum DSM 19732 DNA replication protein YP_005045854.1 1472287 R 720554 CDS YP_005045855.1 374295664 11561643 complement(1473009..1474538) 1 NC_016627.1 PFAM: Integrase core domain; transposase 1474538 11561643 Clocl_1274 Clostridium clariflavum DSM 19732 transposase YP_005045855.1 1473009 R 720554 CDS YP_005045856.1 374295665 11561644 1474638..1475021 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 1475021 11561644 Clocl_1275 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005045856.1 1474638 D 720554 CDS YP_005045857.1 374295666 11561645 1475057..1475719 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 1475719 11561645 Clocl_1276 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005045857.1 1475057 D 720554 CDS YP_005045858.1 374295667 11561646 1476233..1476487 1 NC_016627.1 hypothetical protein 1476487 11561646 Clocl_1277 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045858.1 1476233 D 720554 CDS YP_005045859.1 374295668 11561647 1476628..1476804 1 NC_016627.1 hypothetical protein 1476804 11561647 Clocl_1278 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045859.1 1476628 D 720554 CDS YP_005045860.1 374295669 11561648 1477232..1477645 1 NC_016627.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; hemerythrin-like metal-binding domain-containing protein 1477645 11561648 Clocl_1279 Clostridium clariflavum DSM 19732 hemerythrin-like metal-binding domain-containing protein YP_005045860.1 1477232 D 720554 CDS YP_005045861.1 374295670 11561649 complement(1477747..1479084) 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains 1479084 11561649 Clocl_1280 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005045861.1 1477747 R 720554 CDS YP_005045862.1 374295671 11561650 complement(1479085..1480650) 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; nitrogenase molybdenum-iron protein, alpha and beta chains 1480650 11561650 Clocl_1281 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005045862.1 1479085 R 720554 CDS YP_005045863.1 374295672 11561651 complement(1480725..1481768) 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 1481768 11561651 Clocl_1282 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005045863.1 1480725 R 720554 CDS YP_005045864.1 374295673 11561652 complement(1481859..1482632) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 1482632 11561652 Clocl_1283 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005045864.1 1481859 R 720554 CDS YP_005045865.1 374295674 11561653 1483080..1483931 1 NC_016627.1 hypothetical protein 1483931 11561653 Clocl_1284 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045865.1 1483080 D 720554 CDS YP_005045866.1 374295675 11561654 1483944..1484978 1 NC_016627.1 glutathione synthase/ribosomal protein S6 modification protein 1484978 11561654 Clocl_1285 Clostridium clariflavum DSM 19732 glutathione synthase/ribosomal protein S6 modification protein YP_005045866.1 1483944 D 720554 CDS YP_005045867.1 374295676 11561655 1484926..1485786 1 NC_016627.1 PFAM: Sulfatase; putative membrane-associated, metal-dependent hydrolase 1485786 11561655 Clocl_1286 Clostridium clariflavum DSM 19732 putative membrane-associated, metal-dependent hydrolase YP_005045867.1 1484926 D 720554 CDS YP_005045868.1 374295677 11561656 1485799..1487085 1 NC_016627.1 PFAM: Radical SAM superfamily; HemN C-terminal region; Fe-S oxidoreductase, coproporphyrinogen III oxidase 1487085 11561656 Clocl_1287 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase, coproporphyrinogen III oxidase YP_005045868.1 1485799 D 720554 CDS YP_005045869.1 374295678 11561657 1487078..1488580 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; putative HAD superfamily hydrolase 1488580 11561657 Clocl_1288 Clostridium clariflavum DSM 19732 putative HAD superfamily hydrolase YP_005045869.1 1487078 D 720554 CDS YP_005045870.1 374295679 11561659 complement(1489830..1491119) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 1491119 11561659 Clocl_1290 Clostridium clariflavum DSM 19732 transposase YP_005045870.1 1489830 R 720554 CDS YP_005045871.1 374295680 11561660 complement(1491811..1492536) 1 NC_016627.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family 1492536 11561660 Clocl_1291 Clostridium clariflavum DSM 19732 response regulator of the LytR/AlgR family YP_005045871.1 1491811 R 720554 CDS YP_005045872.1 374295681 11561662 1500575..1502029 1 NC_016627.1 PFAM: S-layer homology domain; Subtilase family; subtilisin-like serine protease 1502029 11561662 Clocl_1293 Clostridium clariflavum DSM 19732 subtilisin-like serine protease YP_005045872.1 1500575 D 720554 CDS YP_005045873.1 374295682 11561663 complement(1502155..1502460) 1 NC_016627.1 hypothetical protein 1502460 11561663 Clocl_1294 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045873.1 1502155 R 720554 CDS YP_005045874.1 374295683 11561667 complement(1503153..1504136) 1 NC_016627.1 PFAM: Dockerin type I repeat; endoglucanase-like protein 1504136 11561667 Clocl_1298 Clostridium clariflavum DSM 19732 endoglucanase-like protein YP_005045874.1 1503153 R 720554 CDS YP_005045875.1 374295684 11561668 1504843..1505667 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 1505667 11561668 Clocl_1299 Clostridium clariflavum DSM 19732 molybdenum ABC transporter periplasmic molybdate-binding protein YP_005045875.1 1504843 D 720554 CDS YP_005045876.1 374295685 11561669 1505693..1506535 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein; molybdate ABC transporter permease 1506535 11561669 Clocl_1300 Clostridium clariflavum DSM 19732 molybdate ABC transporter permease YP_005045876.1 1505693 D 720554 CDS YP_005045877.1 374295686 11561670 1506381..1507448 1 NC_016627.1 PFAM: ABC transporter; manually curated; ABC-type sulfate/molybdate transport systems, ATPase component 1507448 11561670 Clocl_1301 Clostridium clariflavum DSM 19732 ABC-type sulfate/molybdate transport systems, ATPase component YP_005045877.1 1506381 D 720554 CDS YP_005045878.1 374295687 11561671 complement(1507573..1509180) 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 (bRF-3) 1509180 11561671 Clocl_1302 Clostridium clariflavum DSM 19732 peptide chain release factor 3 (bRF-3) YP_005045878.1 1507573 R 720554 CDS YP_005045879.1 374295688 11561672 1509498..1511171 1 NC_016627.1 PFAM: Phosphoribulokinase / Uridine kinase family; uridine kinase 1511171 11561672 Clocl_1303 Clostridium clariflavum DSM 19732 uridine kinase YP_005045879.1 1509498 D 720554 CDS YP_005045880.1 374295689 11561673 1511282..1511635 1 NC_016627.1 PFAM: DRTGG domain; DRTGG domain-containing protein 1511635 11561673 Clocl_1304 Clostridium clariflavum DSM 19732 DRTGG domain-containing protein YP_005045880.1 1511282 D 720554 CDS YP_005045881.1 374295690 11561674 1511632..1512057 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor 1512057 11561674 Clocl_1305 Clostridium clariflavum DSM 19732 anti-sigma regulatory factor YP_005045881.1 1511632 D 720554 CDS YP_005045882.1 374295691 11561675 1512139..1513473 1 NC_016627.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; 4Fe-4S binding domain; iron only hydrogenase large subunit 1513473 11561675 Clocl_1306 Clostridium clariflavum DSM 19732 iron only hydrogenase large subunit YP_005045882.1 1512139 D 720554 CDS YP_005045883.1 374295692 11561676 1513484..1513813 1 NC_016627.1 PFAM: DRTGG domain; DRTGG domain-containing protein 1513813 11561676 Clocl_1307 Clostridium clariflavum DSM 19732 DRTGG domain-containing protein YP_005045883.1 1513484 D 720554 CDS YP_005045884.1 374295693 11561677 1513897..1514610 1 NC_016627.1 PFAM: PHP domain; PHP domain-containing protein 1514610 11561677 Clocl_1308 Clostridium clariflavum DSM 19732 PHP domain-containing protein YP_005045884.1 1513897 D 720554 CDS YP_005045885.1 374295694 11561678 1514975..1515472 1 NC_016627.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH:ubiquinone oxidoreductase 24 kD subunit 1515472 11561678 Clocl_1309 Clostridium clariflavum DSM 19732 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005045885.1 1514975 D 720554 CDS YP_005045886.1 374295695 11561679 1515484..1516050 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 1516050 11561679 Clocl_1310 Clostridium clariflavum DSM 19732 histidine kinase YP_005045886.1 1515484 D 720554 CDS YP_005045887.1 374295696 11561680 1516034..1516402 1 NC_016627.1 ferredoxin 1516402 11561680 Clocl_1311 Clostridium clariflavum DSM 19732 ferredoxin YP_005045887.1 1516034 D 720554 CDS YP_005045888.1 374295697 11561681 1516511..1518304 1 NC_016627.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 1518304 11561681 Clocl_1312 Clostridium clariflavum DSM 19732 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005045888.1 1516511 D 720554 CDS YP_005045889.1 374295698 11561682 1518304..1520079 1 NC_016627.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only; hydrogenase, Fe-only 1520079 11561682 Clocl_1313 Clostridium clariflavum DSM 19732 hydrogenase, Fe-only YP_005045889.1 1518304 D 720554 CDS YP_005045890.1 374295699 11561683 1520217..1520609 1 NC_016627.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; ADP-ribose pyrophosphatase 1520609 11561683 Clocl_1314 Clostridium clariflavum DSM 19732 ADP-ribose pyrophosphatase YP_005045890.1 1520217 D 720554 CDS YP_005045891.1 374295700 11561684 1520620..1521153 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase 1521153 11561684 Clocl_1315 Clostridium clariflavum DSM 19732 nitroreductase YP_005045891.1 1520620 D 720554 CDS YP_005045892.1 374295701 11561685 1521210..1521803 1 NC_016627.1 PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family; hypothetical protein 1521803 11561685 Clocl_1316 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045892.1 1521210 D 720554 CDS YP_005045893.1 374295702 11561686 1521824..1522717 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 1522717 11561686 Clocl_1317 Clostridium clariflavum DSM 19732 DNA-binding domain-containing protein YP_005045893.1 1521824 D 720554 CDS YP_005045894.1 374295703 11561687 1522823..1523983 1 NC_016627.1 PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; aspartate/tyrosine/aromatic aminotransferase 1523983 11561687 Clocl_1318 Clostridium clariflavum DSM 19732 aspartate/tyrosine/aromatic aminotransferase YP_005045894.1 1522823 D 720554 CDS YP_005045895.1 374295704 11561688 1524533..1525552 1 NC_016627.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1525552 11561688 Clocl_1319 Clostridium clariflavum DSM 19732 phenylalanyl-tRNA synthetase subunit alpha YP_005045895.1 1524533 D 720554 CDS YP_005045896.1 374295705 11561689 1525698..1528088 1 NC_016627.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 1528088 11561689 Clocl_1320 Clostridium clariflavum DSM 19732 phenylalanyl-tRNA synthetase subunit beta YP_005045896.1 1525698 D 720554 CDS YP_005045897.1 374295706 11561690 complement(1528186..1528407) 1 NC_016627.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 1528407 11561690 Clocl_1321 Clostridium clariflavum DSM 19732 small, acid-soluble spore protein, alpha/beta type YP_005045897.1 1528186 R 720554 CDS YP_005045898.1 374295707 11561691 1528869..1530221 1 NC_016627.1 PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 1530221 11561691 Clocl_1322 Clostridium clariflavum DSM 19732 glucose-6-phosphate isomerase YP_005045898.1 1528869 D 720554 CDS YP_005045899.1 374295708 11561692 complement(1530288..1531094) 1 NC_016627.1 PFAM: Calcineurin-like phosphoesterase; manually curated; putative phosphohydrolase 1531094 11561692 Clocl_1323 Clostridium clariflavum DSM 19732 putative phosphohydrolase YP_005045899.1 1530288 R 720554 CDS YP_005045900.1 374295709 11561693 1531504..1532757 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 1532757 11561693 Clocl_1324 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005045900.1 1531504 D 720554 CDS YP_005045901.1 374295710 11561695 1533396..1534100 1 NC_016627.1 hypothetical protein 1534100 11561695 Clocl_1326 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045901.1 1533396 D 720554 CDS YP_005045902.1 374295711 11561696 1534380..1535387 1 NC_016627.1 PFAM: Domain of unknown function (DUF377); putative glycosylase 1535387 11561696 Clocl_1327 Clostridium clariflavum DSM 19732 putative glycosylase YP_005045902.1 1534380 D 720554 CDS YP_005045903.1 374295712 11561697 1535447..1536490 1 NC_016627.1 PFAM: Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 1536490 11561697 Clocl_1328 Clostridium clariflavum DSM 19732 Nucleoside-diphosphate-sugar pyrophosphorylase family protein YP_005045903.1 1535447 D 720554 CDS YP_005045904.1 374295713 11561698 1536514..1537689 1 NC_016627.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 1537689 11561698 Clocl_1329 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005045904.1 1536514 D 720554 CDS YP_005045905.1 374295714 11561699 1537689..1538720 1 NC_016627.1 hypothetical protein 1538720 11561699 Clocl_1330 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045905.1 1537689 D 720554 CDS YP_005045906.1 374295715 11561700 1539573..1540661 1 NC_016627.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; phosphomannose isomerase 1540661 11561700 Clocl_1331 Clostridium clariflavum DSM 19732 phosphomannose isomerase YP_005045906.1 1539573 D 720554 CDS YP_005045907.1 374295716 11561701 1540712..1541263 1 NC_016627.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25P 1541263 11561701 Clocl_1332 Clostridium clariflavum DSM 19732 50S ribosomal protein L25P YP_005045907.1 1540712 D 720554 CDS YP_005045908.1 374295717 11561702 1541607..1542401 1 NC_016627.1 PFAM: short chain dehydrogenase; short-chain alcohol dehydrogenase 1542401 11561702 Clocl_1333 Clostridium clariflavum DSM 19732 short-chain alcohol dehydrogenase YP_005045908.1 1541607 D 720554 CDS YP_005045909.1 374295718 11561703 1543463..1544428 1 NC_016627.1 PFAM: HTH domain; putative transcriptional regulator 1544428 11561703 Clocl_1334 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005045909.1 1543463 D 720554 CDS YP_005045910.1 374295719 11561704 complement(1544626..1545915) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 1545915 11561704 Clocl_1335 Clostridium clariflavum DSM 19732 transposase YP_005045910.1 1544626 R 720554 CDS YP_005045911.1 374295720 11561705 1546330..1546845 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 1546845 11561705 Clocl_1336 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005045911.1 1546330 D 720554 CDS YP_005045912.1 374295721 11561706 1546845..1548128 1 NC_016627.1 hypothetical protein 1548128 11561706 Clocl_1337 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045912.1 1546845 D 720554 CDS YP_005045913.1 374295722 11561707 1548424..1549263 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 1549263 11561707 Clocl_1338 Clostridium clariflavum DSM 19732 HAD-superfamily hydrolase YP_005045913.1 1548424 D 720554 CDS YP_005045914.1 374295723 11561708 1549397..1549984 1 NC_016627.1 PFAM: NADPH-dependent FMN reductase; manually curated; multimeric flavodoxin WrbA 1549984 11561708 Clocl_1339 Clostridium clariflavum DSM 19732 multimeric flavodoxin WrbA YP_005045914.1 1549397 D 720554 CDS YP_005045915.1 374295724 11561709 1550329..1550997 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 1550997 11561709 Clocl_1340 Clostridium clariflavum DSM 19732 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein YP_005045915.1 1550329 D 720554 CDS YP_005045916.1 374295725 11561710 1551012..1551737 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 1551737 11561710 Clocl_1341 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005045916.1 1551012 D 720554 CDS YP_005045917.1 374295726 11561711 1551773..1551979 1 NC_016627.1 hypothetical protein 1551979 11561711 Clocl_1342 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045917.1 1551773 D 720554 CDS YP_005045918.1 374295727 11561712 1552023..1553081 1 NC_016627.1 PFAM: domain; 2-oxoacid:ferredoxin oxidoreductase subunit alpha 1553081 11561712 Clocl_1343 Clostridium clariflavum DSM 19732 2-oxoacid:ferredoxin oxidoreductase subunit alpha YP_005045918.1 1552023 D 720554 CDS YP_005045919.1 374295728 11561713 1553099..1553845 1 NC_016627.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 2-oxoacid:ferredoxin oxidoreductase subunit beta 1553845 11561713 Clocl_1344 Clostridium clariflavum DSM 19732 2-oxoacid:ferredoxin oxidoreductase subunit beta YP_005045919.1 1553099 D 720554 CDS YP_005045920.1 374295729 11561714 1553853..1554386 1 NC_016627.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:ferredoxin oxidoreductase subunit gamma 1554386 11561714 Clocl_1345 Clostridium clariflavum DSM 19732 2-oxoacid:ferredoxin oxidoreductase subunit gamma YP_005045920.1 1553853 D 720554 CDS YP_005045921.1 374295730 11561715 complement(1554505..1556619) 1 NC_016627.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; glutamine synthetase 1556619 11561715 Clocl_1346 Clostridium clariflavum DSM 19732 glutamine synthetase YP_005045921.1 1554505 R 720554 CDS YP_005045922.1 374295731 11561716 complement(1557058..1557378) 1 NC_016627.1 hypothetical protein 1557378 11561716 Clocl_1347 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045922.1 1557058 R 720554 CDS YP_005045923.1 374295732 11561717 complement(1557530..1558633) 1 NC_016627.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; cell envelope-related function transcriptional attenuator common domain-containing protein 1558633 11561717 Clocl_1348 Clostridium clariflavum DSM 19732 cell envelope-related function transcriptional attenuator common domain-containing protein YP_005045923.1 1557530 R 720554 CDS YP_005045924.1 374295733 11561718 complement(1558886..1559629) 1 NC_016627.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family 1559629 11561718 Clocl_1349 Clostridium clariflavum DSM 19732 response regulator of the LytR/AlgR family YP_005045924.1 1558886 R 720554 CDS YP_005045925.1 374295734 11561719 complement(1559632..1560165) 1 NC_016627.1 hypothetical protein 1560165 11561719 Clocl_1350 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045925.1 1559632 R 720554 CDS YP_005045926.1 374295735 11561720 complement(1560179..1561174) 1 NC_016627.1 PFAM: SigmaW regulon antibacterial; hypothetical protein 1561174 11561720 Clocl_1351 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045926.1 1560179 R 720554 CDS YP_005045927.1 374295736 11561721 complement(1561223..1561726) 1 NC_016627.1 PFAM: NfeD-like; membrane-bound serine protease 1561726 11561721 Clocl_1352 Clostridium clariflavum DSM 19732 membrane-bound serine protease YP_005045927.1 1561223 R 720554 CDS YP_005045928.1 374295737 11561722 complement(1561921..1562790) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 1562790 11561722 Clocl_1353 Clostridium clariflavum DSM 19732 histidine kinase YP_005045928.1 1561921 R 720554 CDS YP_005045929.1 374295738 11561723 complement(1563006..1564073) 1 NC_016627.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; branched-chain amino acid aminotransferase, group II 1564073 11561723 Clocl_1354 Clostridium clariflavum DSM 19732 branched-chain amino acid aminotransferase, group II YP_005045929.1 1563006 R 720554 CDS YP_005045930.1 374295739 11561724 1564398..1564916 1 NC_016627.1 PFAM: Protein of unknown function; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD phosphatase subfamily IIIA 1564916 11561724 Clocl_1355 Clostridium clariflavum DSM 19732 HAD phosphatase subfamily IIIA YP_005045930.1 1564398 D 720554 CDS YP_005045931.1 374295740 11561725 1564972..1565853 1 NC_016627.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate dehydrogenase 1565853 11561725 Clocl_1356 Clostridium clariflavum DSM 19732 shikimate dehydrogenase YP_005045931.1 1564972 D 720554 CDS YP_005045932.1 374295741 11561726 1566153..1566530 1 NC_016627.1 hypothetical protein 1566530 11561726 Clocl_1357 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045932.1 1566153 D 720554 CDS YP_005045933.1 374295742 11561727 1566636..1567442 1 NC_016627.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; prepilin signal peptidase PulO-like peptidase 1567442 11561727 Clocl_1358 Clostridium clariflavum DSM 19732 prepilin signal peptidase PulO-like peptidase YP_005045933.1 1566636 D 720554 CDS YP_005045934.1 374295743 11561728 1567541..1567813 1 NC_016627.1 PFAM: Late competence development protein ComFB; Late competence development protein ComFB 1567813 11561728 Clocl_1359 Clostridium clariflavum DSM 19732 Late competence development protein ComFB YP_005045934.1 1567541 D 720554 CDS YP_005045935.1 374295744 11561729 1567980..1568843 1 NC_016627.1 PFAM: Xylose isomerase-like TIM barrel; endonuclease IV 1568843 11561729 Clocl_1360 Clostridium clariflavum DSM 19732 endonuclease IV YP_005045935.1 1567980 D 720554 CDS YP_005045936.1 374295745 11561730 1568840..1569268 1 NC_016627.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 1569268 11561730 Clocl_1361 Clostridium clariflavum DSM 19732 3-dehydroquinate dehydratase YP_005045936.1 1568840 D 720554 CDS YP_005045937.1 374295746 11561731 1569330..1570415 1 NC_016627.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro aminopeptidase 1570415 11561731 Clocl_1362 Clostridium clariflavum DSM 19732 Xaa-Pro aminopeptidase YP_005045937.1 1569330 D 720554 CDS YP_005045938.1 374295747 11561732 1570794..1571351 1 NC_016627.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P (EF-P) 1571351 11561732 Clocl_1363 Clostridium clariflavum DSM 19732 translation elongation factor P (EF-P) YP_005045938.1 1570794 D 720554 CDS YP_005045939.1 374295748 11561733 1571581..1572003 1 NC_016627.1 hypothetical protein 1572003 11561733 Clocl_1364 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045939.1 1571581 D 720554 CDS YP_005045940.1 374295749 11561734 complement(1572122..1572868) 1 NC_016627.1 TIGRFAM: probable DNA metabolism protein; putative DNA metabolism protein 1572868 11561734 Clocl_1365 Clostridium clariflavum DSM 19732 putative DNA metabolism protein YP_005045940.1 1572122 R 720554 CDS YP_005045941.1 374295750 11561735 1574197..1574433 1 NC_016627.1 hypothetical protein 1574433 11561735 Clocl_1366 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045941.1 1574197 D 720554 CDS YP_005045942.1 374295751 11561736 1574503..1576353 1 NC_016627.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein 1576353 11561736 Clocl_1367 Clostridium clariflavum DSM 19732 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein YP_005045942.1 1574503 D 720554 CDS YP_005045943.1 374295752 11561737 1576587..1576856 1 NC_016627.1 PFAM: ACT domain; ACT domain-containing protein 1576856 11561737 Clocl_1368 Clostridium clariflavum DSM 19732 ACT domain-containing protein YP_005045943.1 1576587 D 720554 CDS YP_005045944.1 374295753 11561738 1576868..1578226 1 NC_016627.1 PFAM: Uncharacterized ACR (DUF711); hypothetical protein 1578226 11561738 Clocl_1369 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045944.1 1576868 D 720554 CDS YP_005045945.1 374295754 11561739 1578428..1578976 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 1578976 11561739 Clocl_1370 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005045945.1 1578428 D 720554 CDS YP_005045946.1 374295755 11561740 1578969..1581968 1 NC_016627.1 PFAM: Beta propeller domain; manually curated; secreted protein with C-terminal beta-propeller domain 1581968 11561740 Clocl_1371 Clostridium clariflavum DSM 19732 secreted protein with C-terminal beta-propeller domain YP_005045946.1 1578969 D 720554 CDS YP_005045947.1 374295756 11561741 1582213..1583034 1 NC_016627.1 PFAM: Protein of unknown function (DUF990); ABC transporter permease 1583034 11561741 Clocl_1372 Clostridium clariflavum DSM 19732 ABC transporter permease YP_005045947.1 1582213 D 720554 CDS YP_005045948.1 374295757 11561742 1583031..1583813 1 NC_016627.1 PFAM: Protein of unknown function (DUF990); ABC transporter permease 1583813 11561742 Clocl_1373 Clostridium clariflavum DSM 19732 ABC transporter permease YP_005045948.1 1583031 D 720554 CDS YP_005045949.1 374295758 11561743 1583816..1584787 1 NC_016627.1 PFAM: ABC transporter; ABC transporter ATPase 1584787 11561743 Clocl_1374 Clostridium clariflavum DSM 19732 ABC transporter ATPase YP_005045949.1 1583816 D 720554 CDS YP_005045950.1 374295759 11561744 1585409..1585834 1 NC_016627.1 hypothetical protein 1585834 11561744 Clocl_1375 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045950.1 1585409 D 720554 CDS YP_005045951.1 374295760 11561745 1585804..1586097 1 NC_016627.1 hypothetical protein 1586097 11561745 Clocl_1376 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045951.1 1585804 D 720554 CDS YP_005045952.1 374295761 11561746 1586094..1586822 1 NC_016627.1 hypothetical protein 1586822 11561746 Clocl_1377 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045952.1 1586094 D 720554 CDS YP_005045953.1 374295762 11561747 1587306..1588526 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM additional 4Fe4S-binding domain protein 1588526 11561747 Clocl_1378 Clostridium clariflavum DSM 19732 radical SAM additional 4Fe4S-binding domain protein YP_005045953.1 1587306 D 720554 CDS YP_005045954.1 374295763 11561748 1588527..1589675 1 NC_016627.1 hypothetical protein 1589675 11561748 Clocl_1379 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045954.1 1588527 D 720554 CDS YP_005045955.1 374295764 11561749 1589787..1590650 1 NC_016627.1 PFAM: Peptidase family M23; membrane-bound metallopeptidase 1590650 11561749 Clocl_1380 Clostridium clariflavum DSM 19732 membrane-bound metallopeptidase YP_005045955.1 1589787 D 720554 CDS YP_005045956.1 374295765 11561750 complement(1590839..1591435) 1 NC_016627.1 PFAM: Manganese containing catalase; Mn-containing catalase 1591435 11561750 Clocl_1381 Clostridium clariflavum DSM 19732 Mn-containing catalase YP_005045956.1 1590839 R 720554 CDS YP_005045957.1 374295766 11561751 complement(1591466..1591714) 1 NC_016627.1 hypothetical protein 1591714 11561751 Clocl_1382 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045957.1 1591466 R 720554 CDS YP_005045958.1 374295767 11561752 complement(1591726..1591941) 1 NC_016627.1 hypothetical protein 1591941 11561752 Clocl_1383 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045958.1 1591726 R 720554 CDS YP_005045959.1 374295768 11561753 1592143..1592985 1 NC_016627.1 PFAM: Carbon-nitrogen hydrolase; putative amidohydrolase 1592985 11561753 Clocl_1384 Clostridium clariflavum DSM 19732 putative amidohydrolase YP_005045959.1 1592143 D 720554 CDS YP_005045960.1 374295769 11561754 1593215..1593478 1 NC_016627.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 1593478 11561754 Clocl_1385 Clostridium clariflavum DSM 19732 30S ribosomal protein S15 YP_005045960.1 1593215 D 720554 CDS YP_005045961.1 374295770 11561755 1593811..1595940 1 NC_016627.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 1595940 11561755 Clocl_1386 Clostridium clariflavum DSM 19732 polyribonucleotide nucleotidyltransferase YP_005045961.1 1593811 D 720554 CDS YP_005045962.1 374295771 11561756 1595973..1597226 1 NC_016627.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); putative Zn-dependent peptidase 1597226 11561756 Clocl_1387 Clostridium clariflavum DSM 19732 putative Zn-dependent peptidase YP_005045962.1 1595973 D 720554 CDS YP_005045963.1 374295772 11561757 1597557..1598429 1 NC_016627.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit; glutamyl-tRNA reductase 1598429 11561757 Clocl_1388 Clostridium clariflavum DSM 19732 glutamyl-tRNA reductase YP_005045963.1 1597557 D 720554 CDS YP_005045964.1 374295773 11561758 1598433..1599017 1 NC_016627.1 PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit; dipicolinic acid synthetase subunit B 1599017 11561758 Clocl_1389 Clostridium clariflavum DSM 19732 dipicolinic acid synthetase subunit B YP_005045964.1 1598433 D 720554 CDS YP_005045965.1 374295774 11561759 1599607..1601979 1 NC_016627.1 PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 1601979 11561759 Clocl_1390 Clostridium clariflavum DSM 19732 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_005045965.1 1599607 D 720554 CDS YP_005045966.1 374295775 11561760 1601997..1603052 1 NC_016627.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; pilus retraction protein PilT 1603052 11561760 Clocl_1391 Clostridium clariflavum DSM 19732 pilus retraction protein PilT YP_005045966.1 1601997 D 720554 CDS YP_005045967.1 374295776 11561761 1603415..1604629 1 NC_016627.1 PFAM: Bacterial type II secretion system protein F domain; type II secretory pathway, component PulF 1604629 11561761 Clocl_1392 Clostridium clariflavum DSM 19732 type II secretory pathway, component PulF YP_005045967.1 1603415 D 720554 CDS YP_005045968.1 374295777 11561762 1604770..1605288 1 NC_016627.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1605288 11561762 Clocl_1393 Clostridium clariflavum DSM 19732 prepilin-type N-terminal cleavage/methylation domain-containing protein YP_005045968.1 1604770 D 720554 CDS YP_005045969.1 374295778 11561763 1605351..1605965 1 NC_016627.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1605965 11561763 Clocl_1394 Clostridium clariflavum DSM 19732 prepilin-type N-terminal cleavage/methylation domain-containing protein YP_005045969.1 1605351 D 720554 CDS YP_005045970.1 374295779 11561764 1605989..1606546 1 NC_016627.1 PFAM: Fimbrial assembly protein (PilN); Tfp pilus assembly protein PilN 1606546 11561764 Clocl_1395 Clostridium clariflavum DSM 19732 Tfp pilus assembly protein PilN YP_005045970.1 1605989 D 720554 CDS YP_005045971.1 374295780 11561765 1606550..1607716 1 NC_016627.1 hypothetical protein 1607716 11561765 Clocl_1396 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045971.1 1606550 D 720554 CDS YP_005045972.1 374295781 11561766 1607726..1608331 1 NC_016627.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; prepilin-type N-terminal cleavage/methylation domain-containing protein 1608331 11561766 Clocl_1397 Clostridium clariflavum DSM 19732 prepilin-type N-terminal cleavage/methylation domain-containing protein YP_005045972.1 1607726 D 720554 CDS YP_005045973.1 374295782 11561767 1608406..1610997 1 NC_016627.1 hypothetical protein 1610997 11561767 Clocl_1398 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045973.1 1608406 D 720554 CDS YP_005045974.1 374295783 11561768 1611014..1612288 1 NC_016627.1 manually curated; hypothetical protein 1612288 11561768 Clocl_1399 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045974.1 1611014 D 720554 CDS YP_005045975.1 374295784 11561769 1612425..1613165 1 NC_016627.1 PFAM: Clp protease; protease subunit of ATP-dependent protease 1613165 11561769 Clocl_1400 Clostridium clariflavum DSM 19732 protease subunit of ATP-dependent protease YP_005045975.1 1612425 D 720554 CDS YP_005045976.1 374295785 11561770 1613206..1613424 1 NC_016627.1 hypothetical protein 1613424 11561770 Clocl_1401 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045976.1 1613206 D 720554 CDS YP_005045977.1 374295786 11561771 1613731..1616094 1 NC_016627.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; manually curated; DNA segregation ATPase FtsK 1616094 11561771 Clocl_1402 Clostridium clariflavum DSM 19732 DNA segregation ATPase FtsK YP_005045977.1 1613731 D 720554 CDS YP_005045978.1 374295787 11561772 1616170..1618155 1 NC_016627.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ; manually curated; radical SAM protein YgiQ 1618155 11561772 Clocl_1403 Clostridium clariflavum DSM 19732 radical SAM protein YgiQ YP_005045978.1 1616170 D 720554 CDS YP_005045979.1 374295788 11561773 1618380..1619240 1 NC_016627.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; manually curated; 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase 1619240 11561773 Clocl_1404 Clostridium clariflavum DSM 19732 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase YP_005045979.1 1618380 D 720554 CDS YP_005045980.1 374295789 11561774 1619243..1619923 1 NC_016627.1 hypothetical protein 1619923 11561774 Clocl_1405 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045980.1 1619243 D 720554 CDS YP_005045981.1 374295790 11561775 1620074..1621660 1 NC_016627.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; hypothetical protein 1621660 11561775 Clocl_1406 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045981.1 1620074 D 720554 CDS YP_005045982.1 374295791 11561776 1621761..1622543 1 NC_016627.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; metallophosphoesterase, MG_246/BB_0505 family 1622543 11561776 Clocl_1407 Clostridium clariflavum DSM 19732 metallophosphoesterase, MG_246/BB_0505 family YP_005045982.1 1621761 D 720554 CDS YP_005045983.1 374295792 11561777 1622610..1622879 1 NC_016627.1 PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 1622879 11561777 Clocl_1408 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045983.1 1622610 D 720554 CDS YP_005045984.1 374295793 11561778 1623017..1623826 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1623826 11561778 Clocl_1409 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005045984.1 1623017 D 720554 CDS YP_005045985.1 374295794 11561779 1623870..1626125 1 NC_016627.1 PFAM: von Willebrand factor type A domain; von Willebrand factor type A-like protein 1626125 11561779 Clocl_1410 Clostridium clariflavum DSM 19732 von Willebrand factor type A-like protein YP_005045985.1 1623870 D 720554 CDS YP_005045986.1 374295795 11561780 1626379..1626732 1 NC_016627.1 PFAM: Transposase; Transposase 1626732 11561780 Clocl_1411 Clostridium clariflavum DSM 19732 Transposase YP_005045986.1 1626379 D 720554 CDS YP_005045987.1 374295796 11561781 1626729..1627082 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1627082 11561781 Clocl_1412 Clostridium clariflavum DSM 19732 transposase YP_005045987.1 1626729 D 720554 CDS YP_005045988.1 374295797 11561782 1627146..1628750 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 1628750 11561782 Clocl_1413 Clostridium clariflavum DSM 19732 transposase YP_005045988.1 1627146 D 720554 CDS YP_005045989.1 374295798 11561783 1628747..1628848 1 NC_016627.1 hypothetical protein 1628848 11561783 Clocl_1414 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045989.1 1628747 D 720554 CDS YP_005045990.1 374295799 11561784 1628871..1629032 1 NC_016627.1 hypothetical protein 1629032 11561784 Clocl_1415 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045990.1 1628871 D 720554 CDS YP_005045991.1 374295800 11561785 complement(1629221..1630306) 1 NC_016627.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms); aspartate-semialdehyde dehydrogenase 1630306 11561785 Clocl_1416 Clostridium clariflavum DSM 19732 aspartate-semialdehyde dehydrogenase YP_005045991.1 1629221 R 720554 CDS YP_005045992.1 374295801 11561786 1631132..1632541 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 1632541 11561786 Clocl_1417 Clostridium clariflavum DSM 19732 putative efflux protein, MATE family YP_005045992.1 1631132 D 720554 CDS YP_005045993.1 374295802 11561787 1632811..1633584 1 NC_016627.1 hypothetical protein 1633584 11561787 Clocl_1418 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045993.1 1632811 D 720554 CDS YP_005045994.1 374295803 11561788 1633721..1633984 1 NC_016627.1 PFAM: Protein of unknown function (DUF3343); hypothetical protein 1633984 11561788 Clocl_1419 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045994.1 1633721 D 720554 CDS YP_005045995.1 374295804 11561789 complement(1634215..1635192) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-D-glucose 4,6-dehydratase 1635192 11561789 Clocl_1420 Clostridium clariflavum DSM 19732 dTDP-D-glucose 4,6-dehydratase YP_005045995.1 1634215 R 720554 CDS YP_005045996.1 374295805 11561790 1635557..1636258 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF881); hypothetical protein 1636258 11561790 Clocl_1421 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045996.1 1635557 D 720554 CDS YP_005045997.1 374295806 11561791 complement(1636343..1636831) 1 NC_016627.1 manually curated; hypothetical protein 1636831 11561791 Clocl_1422 Clostridium clariflavum DSM 19732 hypothetical protein YP_005045997.1 1636343 R 720554 CDS YP_005045998.1 374295807 11561792 complement(1637095..1637421) 1 NC_016627.1 PFAM: Carbohydrate binding domain (family 25); Carbohydrate binding domain (family 25) 1637421 11561792 Clocl_1423 Clostridium clariflavum DSM 19732 Carbohydrate binding domain (family 25) YP_005045998.1 1637095 R 720554 CDS YP_005045999.1 374295808 11561793 1637875..1640334 1 NC_016627.1 PFAM: Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 1640334 11561793 Clocl_1424 Clostridium clariflavum DSM 19732 Nucleoside-diphosphate-sugar pyrophosphorylase family protein YP_005045999.1 1637875 D 720554 CDS YP_005046000.1 374295809 11561794 complement(1640416..1641021) 1 NC_016627.1 hypothetical protein 1641021 11561794 Clocl_1425 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046000.1 1640416 R 720554 CDS YP_005046001.1 374295810 11561795 1641375..1642091 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF881); hypothetical protein 1642091 11561795 Clocl_1426 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046001.1 1641375 D 720554 CDS YP_005046002.1 374295811 11561796 1642088..1642792 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF881); hypothetical protein 1642792 11561796 Clocl_1427 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046002.1 1642088 D 720554 CDS YP_005046003.1 374295812 11561797 1643048..1643971 1 NC_016627.1 PFAM: Polysaccharide deacetylase; TIGRFAM: delta-lactam-biosynthetic de-N-acetylase; putative xylanase/chitin deacetylase 1643971 11561797 Clocl_1428 Clostridium clariflavum DSM 19732 putative xylanase/chitin deacetylase YP_005046003.1 1643048 D 720554 CDS YP_005046004.1 374295813 11561798 1644022..1644339 1 NC_016627.1 PFAM: YabP family; TIGRFAM: sporulation protein YqfC; sporulation protein YqfC 1644339 11561798 Clocl_1429 Clostridium clariflavum DSM 19732 sporulation protein YqfC YP_005046004.1 1644022 D 720554 CDS YP_005046005.1 374295814 11561799 1644707..1645900 1 NC_016627.1 PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; manually curated; sporulation protein YqfD 1645900 11561799 Clocl_1430 Clostridium clariflavum DSM 19732 sporulation protein YqfD YP_005046005.1 1644707 D 720554 CDS YP_005046006.1 374295815 11561800 1645901..1646872 1 NC_016627.1 PFAM: PhoH-like protein; phosphate starvation-inducible protein PhoH 1646872 11561800 Clocl_1431 Clostridium clariflavum DSM 19732 phosphate starvation-inducible protein PhoH YP_005046006.1 1645901 D 720554 CDS YP_005046007.1 374295816 11561801 1646922..1649243 1 NC_016627.1 PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; manually curated; putative domain HDIG-containing protein 1649243 11561801 Clocl_1432 Clostridium clariflavum DSM 19732 putative domain HDIG-containing protein YP_005046007.1 1646922 D 720554 CDS YP_005046008.1 374295817 11561802 1649240..1649725 1 NC_016627.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metalloprotein, YbeY/UPF0054 family 1649725 11561802 Clocl_1433 Clostridium clariflavum DSM 19732 metalloprotein, YbeY/UPF0054 family YP_005046008.1 1649240 D 720554 CDS YP_005046009.1 374295818 11561803 1649811..1650704 1 NC_016627.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 1650704 11561803 Clocl_1434 Clostridium clariflavum DSM 19732 GTP-binding protein Era YP_005046009.1 1649811 D 720554 CDS YP_005046010.1 374295819 11561804 1650987..1651130 1 NC_016627.1 hypothetical protein 1651130 11561804 Clocl_1435 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046010.1 1650987 D 720554 CDS YP_005046011.1 374295820 11561805 1651229..1651972 1 NC_016627.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA replication and repair protein RecO 1651972 11561805 Clocl_1436 Clostridium clariflavum DSM 19732 DNA replication and repair protein RecO YP_005046011.1 1651229 D 720554 CDS YP_005046012.1 374295821 11561806 1652887..1653558 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 1653558 11561806 Clocl_1438 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005046012.1 1652887 D 720554 CDS YP_005046013.1 374295822 11561807 1653804..1654967 1 NC_016627.1 PFAM: Aminotransferase class-V; cysteine desulfurase 1654967 11561807 Clocl_1439 Clostridium clariflavum DSM 19732 cysteine desulfurase YP_005046013.1 1653804 D 720554 CDS YP_005046014.1 374295823 11561808 1654964..1656142 1 NC_016627.1 PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; thiazole biosynthesis/tRNA modification protein ThiI 1656142 11561808 Clocl_1440 Clostridium clariflavum DSM 19732 thiazole biosynthesis/tRNA modification protein ThiI YP_005046014.1 1654964 D 720554 CDS YP_005046015.1 374295824 11561809 1656314..1657684 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; G5 domain; VanW like protein; putative vancomycin resistance protein 1657684 11561809 Clocl_1441 Clostridium clariflavum DSM 19732 putative vancomycin resistance protein YP_005046015.1 1656314 D 720554 CDS YP_005046016.1 374295825 11561810 1657761..1658447 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2225); hypothetical protein 1658447 11561810 Clocl_1442 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046016.1 1657761 D 720554 CDS YP_005046017.1 374295826 11561811 1658576..1659559 1 NC_016627.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; hydrogenase maturation factor 1659559 11561811 Clocl_1443 Clostridium clariflavum DSM 19732 hydrogenase maturation factor YP_005046017.1 1658576 D 720554 CDS YP_005046018.1 374295827 11561812 1659620..1661032 1 NC_016627.1 PFAM: O-Antigen ligase; Lipid A core--O-antigen ligase-like protein 1661032 11561812 Clocl_1444 Clostridium clariflavum DSM 19732 Lipid A core--O-antigen ligase-like protein YP_005046018.1 1659620 D 720554 CDS YP_005046019.1 374295828 11561813 1661194..1662432 1 NC_016627.1 PFAM: Serine hydroxymethyltransferase; glycine/serine hydroxymethyltransferase 1662432 11561813 Clocl_1445 Clostridium clariflavum DSM 19732 glycine/serine hydroxymethyltransferase YP_005046019.1 1661194 D 720554 CDS YP_005046020.1 374295829 11561814 complement(1662600..1665236) 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 1665236 11561814 Clocl_1446 Clostridium clariflavum DSM 19732 transglutaminase YP_005046020.1 1662600 R 720554 CDS YP_005046021.1 374295830 11561815 complement(1665258..1666466) 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 1666466 11561815 Clocl_1447 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046021.1 1665258 R 720554 CDS YP_005046022.1 374295831 11561816 complement(1666459..1667409) 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 1667409 11561816 Clocl_1448 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005046022.1 1666459 R 720554 CDS YP_005046023.1 374295832 11561817 complement(1667541..1668491) 1 NC_016627.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase; L-lactate dehydrogenase 1668491 11561817 Clocl_1449 Clostridium clariflavum DSM 19732 L-lactate dehydrogenase YP_005046023.1 1667541 R 720554 CDS YP_005046024.1 374295833 11561818 1668976..1670220 1 NC_016627.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA-like protein 1670220 11561818 Clocl_1450 Clostridium clariflavum DSM 19732 competence/damage-inducible protein CinA-like protein YP_005046024.1 1668976 D 720554 CDS YP_005046025.1 374295834 11561819 1670325..1671896 1 NC_016627.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 1671896 11561819 Clocl_1451 Clostridium clariflavum DSM 19732 integral membrane protein MviN YP_005046025.1 1670325 D 720554 CDS YP_005046026.1 374295835 11561820 1672148..1673206 1 NC_016627.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; protein RecA 1673206 11561820 Clocl_1452 Clostridium clariflavum DSM 19732 protein RecA YP_005046026.1 1672148 D 720554 CDS YP_005046027.1 374295836 11561821 1673524..1674489 1 NC_016627.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; HflK protein 1674489 11561821 Clocl_1453 Clostridium clariflavum DSM 19732 HflK protein YP_005046027.1 1673524 D 720554 CDS YP_005046028.1 374295837 11561822 1674491..1675354 1 NC_016627.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; membrane protease subunit, stomatin/prohibitin 1675354 11561822 Clocl_1454 Clostridium clariflavum DSM 19732 membrane protease subunit, stomatin/prohibitin YP_005046028.1 1674491 D 720554 CDS YP_005046029.1 374295838 11561823 1675563..1677431 1 NC_016627.1 PFAM: Bacillus/Clostridium GerA spore germination protein; manually curated; spore germination protein, GerA family 1677431 11561823 Clocl_1455 Clostridium clariflavum DSM 19732 spore germination protein, GerA family YP_005046029.1 1675563 D 720554 CDS YP_005046030.1 374295839 11561824 1677415..1678608 1 NC_016627.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease); spore germination protein, amino acid permease 1678608 11561824 Clocl_1456 Clostridium clariflavum DSM 19732 spore germination protein, amino acid permease YP_005046030.1 1677415 D 720554 CDS YP_005046031.1 374295840 11561825 1678592..1679881 1 NC_016627.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family; germination protein, Ger(X)C family 1679881 11561825 Clocl_1457 Clostridium clariflavum DSM 19732 germination protein, Ger(X)C family YP_005046031.1 1678592 D 720554 CDS YP_005046032.1 374295841 11561826 1679906..1680085 1 NC_016627.1 hypothetical protein 1680085 11561826 Clocl_1458 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046032.1 1679906 D 720554 CDS YP_005046033.1 374295842 11561827 1680216..1681133 1 NC_016627.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229); hypothetical protein 1681133 11561827 Clocl_1459 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046033.1 1680216 D 720554 CDS YP_005046034.1 374295843 11561828 1681141..1682262 1 NC_016627.1 hypothetical protein 1682262 11561828 Clocl_1460 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046034.1 1681141 D 720554 CDS YP_005046035.1 374295844 11561829 1682456..1684606 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; manually curated; PAS/PAC sensor signal transduction histidine kinase 1684606 11561829 Clocl_1461 Clostridium clariflavum DSM 19732 PAS/PAC sensor signal transduction histidine kinase YP_005046035.1 1682456 D 720554 CDS YP_005046036.1 374295845 11561831 1685048..1685863 1 NC_016627.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1685863 11561831 Clocl_1463 Clostridium clariflavum DSM 19732 pyrroline-5-carboxylate reductase YP_005046036.1 1685048 D 720554 CDS YP_005046037.1 374295846 11561832 1685875..1686315 1 NC_016627.1 PFAM: RNase H; ribonuclease HI 1686315 11561832 Clocl_1464 Clostridium clariflavum DSM 19732 ribonuclease HI YP_005046037.1 1685875 D 720554 CDS YP_005046038.1 374295847 11561833 1686330..1686878 1 NC_016627.1 PFAM: NUDIX domain; ADP-ribose pyrophosphatase 1686878 11561833 Clocl_1465 Clostridium clariflavum DSM 19732 ADP-ribose pyrophosphatase YP_005046038.1 1686330 D 720554 CDS YP_005046039.1 374295848 11561834 1687210..1687848 1 NC_016627.1 PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M; stage II sporulation protein M 1687848 11561834 Clocl_1466 Clostridium clariflavum DSM 19732 stage II sporulation protein M YP_005046039.1 1687210 D 720554 CDS YP_005046040.1 374295849 11561835 1688215..1689099 1 NC_016627.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerD 1689099 11561835 Clocl_1467 Clostridium clariflavum DSM 19732 tyrosine recombinase XerD YP_005046040.1 1688215 D 720554 CDS YP_005046041.1 374295850 11561836 1689395..1690561 1 NC_016627.1 PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase; phosphopentomutase 1690561 11561836 Clocl_1468 Clostridium clariflavum DSM 19732 phosphopentomutase YP_005046041.1 1689395 D 720554 CDS YP_005046042.1 374295851 11561837 1690582..1691883 1 NC_016627.1 PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase; pyrimidine-nucleoside phosphorylase 1691883 11561837 Clocl_1469 Clostridium clariflavum DSM 19732 pyrimidine-nucleoside phosphorylase YP_005046042.1 1690582 D 720554 CDS YP_005046043.1 374295852 11561838 1691991..1693187 1 NC_016627.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 1693187 11561838 Clocl_1470 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine carboxypeptidase YP_005046043.1 1691991 D 720554 CDS YP_005046044.1 374295853 11561839 1693517..1694548 1 NC_016627.1 PFAM: Membrane domain of glycerophosphoryl diester phosphodiesterase; manually curated; glycerophosphoryl diester phosphodiesterase-like protein 1694548 11561839 Clocl_1471 Clostridium clariflavum DSM 19732 glycerophosphoryl diester phosphodiesterase-like protein YP_005046044.1 1693517 D 720554 CDS YP_005046045.1 374295854 11561840 1694541..1695293 1 NC_016627.1 hypothetical protein 1695293 11561840 Clocl_1472 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046045.1 1694541 D 720554 CDS YP_005046046.1 374295855 11561841 1695326..1696342 1 NC_016627.1 hypothetical protein 1696342 11561841 Clocl_1473 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046046.1 1695326 D 720554 CDS YP_005046047.1 374295856 11561842 1696342..1697334 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 1697334 11561842 Clocl_1474 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005046047.1 1696342 D 720554 CDS YP_005046048.1 374295857 11561843 1697361..1698671 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 1698671 11561843 Clocl_1475 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046048.1 1697361 D 720554 CDS YP_005046049.1 374295858 11561845 1699928..1700683 1 NC_016627.1 PFAM: RDD family; manually curated; putative membrane protein/domain protein 1700683 11561845 Clocl_1477 Clostridium clariflavum DSM 19732 putative membrane protein/domain protein YP_005046049.1 1699928 D 720554 CDS YP_005046050.1 374295859 11561846 complement(1701524..1702594) 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 1702594 11561846 Clocl_1478 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005046050.1 1701524 R 720554 CDS YP_005046051.1 374295860 11561848 1703037..1705130 1 NC_016627.1 PFAM: Domain of unknown function (DUF303); Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; CBM6-containing protein,glycosyl hydrolase family 11,dockerin-like protein 1705130 11561848 Clocl_1480 Clostridium clariflavum DSM 19732 CBM6-containing protein,glycosyl hydrolase family 11,dockerin-like protein YP_005046051.1 1703037 D 720554 CDS YP_005046052.1 374295861 11561849 1705574..1706887 1 NC_016627.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 1706887 11561849 Clocl_1481 Clostridium clariflavum DSM 19732 diaminopimelate decarboxylase YP_005046052.1 1705574 D 720554 CDS YP_005046053.1 374295862 11561850 1707087..1708916 1 NC_016627.1 PFAM: Peptidase family M28; putative aminopeptidase 1708916 11561850 Clocl_1482 Clostridium clariflavum DSM 19732 putative aminopeptidase YP_005046053.1 1707087 D 720554 CDS YP_005046054.1 374295863 11561851 1708938..1711568 1 NC_016627.1 PFAM: DHH family; CBS domain; Poly A polymerase head domain; tRNA nucleotidyltransferase/poly(A) polymerase 1711568 11561851 Clocl_1483 Clostridium clariflavum DSM 19732 tRNA nucleotidyltransferase/poly(A) polymerase YP_005046054.1 1708938 D 720554 CDS YP_005046055.1 374295864 11561852 1711572..1712228 1 NC_016627.1 PFAM: Peptidase family M50; Zn-dependent protease 1712228 11561852 Clocl_1484 Clostridium clariflavum DSM 19732 Zn-dependent protease YP_005046055.1 1711572 D 720554 CDS YP_005046056.1 374295865 11561853 1712360..1713388 1 NC_016627.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; manually curated; tryptophanyl-tRNA synthetase 1713388 11561853 Clocl_1485 Clostridium clariflavum DSM 19732 tryptophanyl-tRNA synthetase YP_005046056.1 1712360 D 720554 CDS YP_005046057.1 374295866 11561854 1713442..1714236 1 NC_016627.1 PFAM: ScpA/B protein; hypothetical protein 1714236 11561854 Clocl_1486 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046057.1 1713442 D 720554 CDS YP_005046058.1 374295867 11561855 1714292..1714882 1 NC_016627.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; segregation and condensation protein B 1714882 11561855 Clocl_1487 Clostridium clariflavum DSM 19732 segregation and condensation protein B YP_005046058.1 1714292 D 720554 CDS YP_005046059.1 374295868 11561856 1714879..1715631 1 NC_016627.1 PFAM: Protein of unknown function (DUF2953); manually curated; hypothetical protein 1715631 11561856 Clocl_1488 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046059.1 1714879 D 720554 CDS YP_005046060.1 374295869 11561857 1715751..1716236 1 NC_016627.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ; manually curated; sporulation protein YtfJ 1716236 11561857 Clocl_1489 Clostridium clariflavum DSM 19732 sporulation protein YtfJ YP_005046060.1 1715751 D 720554 CDS YP_005046061.1 374295870 11561858 1716425..1717138 1 NC_016627.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 1717138 11561858 Clocl_1490 Clostridium clariflavum DSM 19732 pseudouridine synthase family protein YP_005046061.1 1716425 D 720554 CDS YP_005046062.1 374295871 11561859 complement(1717253..1717429) 1 NC_016627.1 PFAM: Domain of Unknown Function (DUF1540); hypothetical protein 1717429 11561859 Clocl_1491 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046062.1 1717253 R 720554 CDS YP_005046063.1 374295872 11561860 1717631..1718458 1 NC_016627.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; spermidine synthase 1718458 11561860 Clocl_1492 Clostridium clariflavum DSM 19732 spermidine synthase YP_005046063.1 1717631 D 720554 CDS YP_005046064.1 374295873 11561861 1718469..1719338 1 NC_016627.1 PFAM: Arginase family; TIGRFAM: agmatinase; agmatinase 1719338 11561861 Clocl_1493 Clostridium clariflavum DSM 19732 agmatinase YP_005046064.1 1718469 D 720554 CDS YP_005046065.1 374295874 11561862 1719567..1720133 1 NC_016627.1 PFAM: Putative rRNA methylase; rRNA methylase 1720133 11561862 Clocl_1494 Clostridium clariflavum DSM 19732 rRNA methylase YP_005046065.1 1719567 D 720554 CDS YP_005046066.1 374295875 11561863 complement(1720217..1720948) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 1720948 11561863 Clocl_1495 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005046066.1 1720217 R 720554 CDS YP_005046067.1 374295876 11561864 1721267..1722817 1 NC_016627.1 PFAM: Carboxyl transferase domain; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1722817 11561864 Clocl_1496 Clostridium clariflavum DSM 19732 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_005046067.1 1721267 D 720554 CDS YP_005046068.1 374295877 11561865 1722920..1723090 1 NC_016627.1 hypothetical protein 1723090 11561865 Clocl_1497 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046068.1 1722920 D 720554 CDS YP_005046069.1 374295878 11561866 1723104..1723502 1 NC_016627.1 PFAM: Biotin-requiring enzyme; biotin carboxyl carrier protein 1723502 11561866 Clocl_1498 Clostridium clariflavum DSM 19732 biotin carboxyl carrier protein YP_005046069.1 1723104 D 720554 CDS YP_005046070.1 374295879 11561867 1723603..1725000 1 NC_016627.1 PFAM: HMGL-like; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit; pyruvate/oxaloacetate carboxyltransferase 1725000 11561867 Clocl_1499 Clostridium clariflavum DSM 19732 pyruvate/oxaloacetate carboxyltransferase YP_005046070.1 1723603 D 720554 CDS YP_005046071.1 374295880 11561868 complement(1725055..1725693) 1 NC_016627.1 hypothetical protein 1725693 11561868 Clocl_1500 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046071.1 1725055 R 720554 CDS YP_005046072.1 374295881 11561869 1725990..1728326 1 NC_016627.1 PFAM: Fibronectin type III domain; fibronectin type III domain-containing protein 1728326 11561869 Clocl_1501 Clostridium clariflavum DSM 19732 fibronectin type III domain-containing protein YP_005046072.1 1725990 D 720554 CDS YP_005046073.1 374295882 11561870 1728338..1737262 1 NC_016627.1 PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 1737262 11561870 Clocl_1502 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005046073.1 1728338 D 720554 CDS YP_005046074.1 374295883 11561871 1737275..1737712 1 NC_016627.1 hypothetical protein 1737712 11561871 Clocl_1503 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046074.1 1737275 D 720554 CDS YP_005046075.1 374295884 11561872 complement(1737914..1738198) 1 NC_016627.1 hypothetical protein 1738198 11561872 Clocl_1504 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046075.1 1737914 R 720554 CDS YP_005046076.1 374295885 11561873 complement(1738195..1739799) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 1739799 11561873 Clocl_1505 Clostridium clariflavum DSM 19732 transposase YP_005046076.1 1738195 R 720554 CDS YP_005046077.1 374295886 11561874 complement(1739863..1740216) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1740216 11561874 Clocl_1506 Clostridium clariflavum DSM 19732 transposase YP_005046077.1 1739863 R 720554 CDS YP_005046078.1 374295887 11561875 complement(1740213..1740566) 1 NC_016627.1 PFAM: Transposase; Transposase 1740566 11561875 Clocl_1507 Clostridium clariflavum DSM 19732 Transposase YP_005046078.1 1740213 R 720554 CDS YP_005046079.1 374295888 11561876 1740708..1741097 1 NC_016627.1 hypothetical protein 1741097 11561876 Clocl_1508 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046079.1 1740708 D 720554 CDS YP_005046080.1 374295889 11561877 1741090..1741227 1 NC_016627.1 PFAM: Mu-like prophage protein Com; Mu-like prophage protein Com 1741227 11561877 Clocl_1509 Clostridium clariflavum DSM 19732 Mu-like prophage protein Com YP_005046080.1 1741090 D 720554 CDS YP_005046081.1 374295890 11561878 1741360..1743600 1 NC_016627.1 PFAM: Poxvirus D5 protein-like; D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain; phage/plasmid primase, P4 family, C-terminal domain protein 1743600 11561878 Clocl_1510 Clostridium clariflavum DSM 19732 phage/plasmid primase, P4 family, C-terminal domain protein YP_005046081.1 1741360 D 720554 CDS YP_005046082.1 374295891 11561879 1743916..1745229 1 NC_016627.1 PFAM: Phage capsid family; putative phage phi-C31 gp36 major capsid-like protein 1745229 11561879 Clocl_1511 Clostridium clariflavum DSM 19732 putative phage phi-C31 gp36 major capsid-like protein YP_005046082.1 1743916 D 720554 CDS YP_005046083.1 374295892 11561880 1745491..1745856 1 NC_016627.1 hypothetical protein 1745856 11561880 Clocl_1512 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046083.1 1745491 D 720554 CDS YP_005046084.1 374295893 11561881 1746196..1747440 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 1747440 11561881 Clocl_1513 Clostridium clariflavum DSM 19732 transposase YP_005046084.1 1746196 D 720554 CDS YP_005046085.1 374295894 11561883 1747943..1748500 1 NC_016627.1 hypothetical protein 1748500 11561883 Clocl_1515 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046085.1 1747943 D 720554 CDS YP_005046086.1 374295895 11561884 1748689..1749042 1 NC_016627.1 PFAM: Transposase; Transposase 1749042 11561884 Clocl_1516 Clostridium clariflavum DSM 19732 Transposase YP_005046086.1 1748689 D 720554 CDS YP_005046087.1 374295896 11561885 1749039..1749392 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1749392 11561885 Clocl_1517 Clostridium clariflavum DSM 19732 transposase YP_005046087.1 1749039 D 720554 CDS YP_005046088.1 374295897 11561887 1751064..1751348 1 NC_016627.1 hypothetical protein 1751348 11561887 Clocl_1519 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046088.1 1751064 D 720554 CDS YP_005046089.1 374295898 11561888 1751383..1753350 1 NC_016627.1 PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 1753350 11561888 Clocl_1520 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005046089.1 1751383 D 720554 CDS YP_005046090.1 374295899 11561889 1753370..1753663 1 NC_016627.1 hypothetical protein 1753663 11561889 Clocl_1521 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046090.1 1753370 D 720554 CDS YP_005046091.1 374295900 11561890 1753816..1754283 1 NC_016627.1 PFAM: Macro domain; putative phosphatase, C-terminal domain of histone macro H2A1 like protein 1754283 11561890 Clocl_1522 Clostridium clariflavum DSM 19732 putative phosphatase, C-terminal domain of histone macro H2A1 like protein YP_005046091.1 1753816 D 720554 CDS YP_005046092.1 374295901 11561891 1754369..1754641 1 NC_016627.1 hypothetical protein 1754641 11561891 Clocl_1523 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046092.1 1754369 D 720554 CDS YP_005046093.1 374295902 11561892 1754778..1755089 1 NC_016627.1 hypothetical protein 1755089 11561892 Clocl_1524 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046093.1 1754778 D 720554 CDS YP_005046094.1 374295903 11561894 1759822..1760211 1 NC_016627.1 hypothetical protein 1760211 11561894 Clocl_1526 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046094.1 1759822 D 720554 CDS YP_005046095.1 374295904 11561895 1760401..1760754 1 NC_016627.1 PFAM: Transposase; Transposase 1760754 11561895 Clocl_1527 Clostridium clariflavum DSM 19732 Transposase YP_005046095.1 1760401 D 720554 CDS YP_005046096.1 374295905 11561896 1760751..1761104 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1761104 11561896 Clocl_1528 Clostridium clariflavum DSM 19732 transposase YP_005046096.1 1760751 D 720554 CDS YP_005046097.1 374295906 11561898 1762771..1763055 1 NC_016627.1 hypothetical protein 1763055 11561898 Clocl_1530 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046097.1 1762771 D 720554 CDS YP_005046098.1 374295907 11561900 1763657..1764439 1 NC_016627.1 hypothetical protein 1764439 11561900 Clocl_1532 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046098.1 1763657 D 720554 CDS YP_005046099.1 374295908 11561901 1764455..1765084 1 NC_016627.1 hypothetical protein 1765084 11561901 Clocl_1533 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046099.1 1764455 D 720554 CDS YP_005046100.1 374295909 11561906 1767095..1767289 1 NC_016627.1 hypothetical protein 1767289 11561906 Clocl_1538 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046100.1 1767095 D 720554 CDS YP_005046101.1 374295910 11561907 1767294..1767749 1 NC_016627.1 hypothetical protein 1767749 11561907 Clocl_1539 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046101.1 1767294 D 720554 CDS YP_005046102.1 374295911 11561908 1768331..1768528 1 NC_016627.1 hypothetical protein 1768528 11561908 Clocl_1540 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046102.1 1768331 D 720554 CDS YP_005046103.1 374295912 11561909 1768943..1769959 1 NC_016627.1 hypothetical protein 1769959 11561909 Clocl_1541 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046103.1 1768943 D 720554 CDS YP_005046104.1 374295913 11561910 complement(1770595..1771986) 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 1771986 11561910 Clocl_1542 Clostridium clariflavum DSM 19732 transposase family protein YP_005046104.1 1770595 R 720554 CDS YP_005046105.1 374295914 11561911 1772414..1777759 1 NC_016627.1 PFAM: Glycosyl hydrolase family 10; Carbohydrate binding domain; Domain of unknown function (DUF1083); S-layer homology domain; beta-1,4-xylanase 1777759 11561911 Clocl_1543 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005046105.1 1772414 D 720554 CDS YP_005046106.1 374295915 11561912 complement(1778214..1778498) 1 NC_016627.1 hypothetical protein 1778498 11561912 Clocl_1544 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046106.1 1778214 R 720554 CDS YP_005046107.1 374295916 11561914 complement(1780169..1780522) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1780522 11561914 Clocl_1546 Clostridium clariflavum DSM 19732 transposase YP_005046107.1 1780169 R 720554 CDS YP_005046108.1 374295917 11561915 complement(1780519..1780872) 1 NC_016627.1 PFAM: Transposase; Transposase 1780872 11561915 Clocl_1547 Clostridium clariflavum DSM 19732 Transposase YP_005046108.1 1780519 R 720554 CDS YP_005046109.1 374295918 11561916 1781019..1783049 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 1783049 11561916 Clocl_1548 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005046109.1 1781019 D 720554 CDS YP_005046110.1 374295919 11561917 complement(1783189..1784793) 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; CHASE3 domain; methyl-accepting chemotaxis protein 1784793 11561917 Clocl_1549 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005046110.1 1783189 R 720554 CDS YP_005046111.1 374295920 11561918 complement(1784819..1785169) 1 NC_016627.1 PFAM: CHASE3 domain; CHASE3 domain protein 1785169 11561918 Clocl_1550 Clostridium clariflavum DSM 19732 CHASE3 domain protein YP_005046111.1 1784819 R 720554 CDS YP_005046112.1 374295921 11561919 1785714..1786775 1 NC_016627.1 PFAM: Domain of unknown function (DUF303); Dockerin type I repeat; dockerin-like protein 1786775 11561919 Clocl_1551 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046112.1 1785714 D 720554 CDS YP_005046113.1 374295922 11561920 1786812..1787315 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; sortase 1787315 11561920 Clocl_1552 Clostridium clariflavum DSM 19732 sortase YP_005046113.1 1786812 D 720554 CDS YP_005046114.1 374295923 11561921 1787417..1787920 1 NC_016627.1 PFAM: Flavin reductase like domain; conserved protein of DIM6/NTAB family; hypothetical protein 1787920 11561921 Clocl_1553 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046114.1 1787417 D 720554 CDS YP_005046115.1 374295924 11561922 1788122..1789864 1 NC_016627.1 PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 1789864 11561922 Clocl_1554 Clostridium clariflavum DSM 19732 tetratricopeptide repeat protein YP_005046115.1 1788122 D 720554 CDS YP_005046116.1 374295925 11561924 complement(1791364..1792209) 1 NC_016627.1 PFAM: Dockerin type I repeat; hypothetical protein 1792209 11561924 Clocl_1556 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046116.1 1791364 R 720554 CDS YP_005046117.1 374295926 11561925 1792743..1793513 1 NC_016627.1 PFAM: ThiF family; dinucleotide-utilizing protein 1793513 11561925 Clocl_1557 Clostridium clariflavum DSM 19732 dinucleotide-utilizing protein YP_005046117.1 1792743 D 720554 CDS YP_005046118.1 374295927 11561926 complement(1793749..1794543) 1 NC_016627.1 hypothetical protein 1794543 11561926 Clocl_1558 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046118.1 1793749 R 720554 CDS YP_005046119.1 374295928 11561927 complement(1794537..1795235) 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 1795235 11561927 Clocl_1559 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005046119.1 1794537 R 720554 CDS YP_005046120.1 374295929 11561928 complement(1795232..1795606) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, gntR family; putative transcriptional regulator 1795606 11561928 Clocl_1560 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005046120.1 1795232 R 720554 CDS YP_005046121.1 374295930 11561929 1796724..1798436 1 NC_016627.1 PFAM: Protein of unknown function (DUF1538); hypothetical protein 1798436 11561929 Clocl_1561 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046121.1 1796724 D 720554 CDS YP_005046122.1 374295931 11561930 1798429..1798743 1 NC_016627.1 hypothetical protein 1798743 11561930 Clocl_1562 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046122.1 1798429 D 720554 CDS YP_005046123.1 374295932 11561931 1798758..1799102 1 NC_016627.1 nitrogen regulatory protein P-II family 1799102 11561931 Clocl_1563 Clostridium clariflavum DSM 19732 nitrogen regulatory protein P-II family YP_005046123.1 1798758 D 720554 CDS YP_005046124.1 374295933 11561932 1799726..1802323 1 NC_016627.1 PFAM: Dockerin type I repeat; PKD domain; PDK repeat-containing protein 1802323 11561932 Clocl_1564 Clostridium clariflavum DSM 19732 PDK repeat-containing protein YP_005046124.1 1799726 D 720554 CDS YP_005046125.1 374295934 11561933 complement(1802525..1804282) 1 NC_016627.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 1804282 11561933 Clocl_1565 Clostridium clariflavum DSM 19732 lytic murein transglycosylase YP_005046125.1 1802525 R 720554 CDS YP_005046126.1 374295935 11561934 1804980..1807853 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein 1807853 11561934 Clocl_1566 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein,dockerin-like protein YP_005046126.1 1804980 D 720554 CDS YP_005046127.1 374295936 11561935 1807866..1809998 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; thioredoxin domain-containing protein 1809998 11561935 Clocl_1567 Clostridium clariflavum DSM 19732 thioredoxin domain-containing protein YP_005046127.1 1807866 D 720554 CDS YP_005046128.1 374295937 11561936 1810378..1810893 1 NC_016627.1 hypothetical protein 1810893 11561936 Clocl_1568 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046128.1 1810378 D 720554 CDS YP_005046129.1 374295938 11561937 1811086..1811337 1 NC_016627.1 TIGRFAM: putative iron-only hydrogenase system regulator; putative iron-only hydrogenase system regulator 1811337 11561937 Clocl_1569 Clostridium clariflavum DSM 19732 putative iron-only hydrogenase system regulator YP_005046129.1 1811086 D 720554 CDS YP_005046130.1 374295939 11561938 1811658..1813022 1 NC_016627.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: iron-only hydrogenase maturation rSAM protein HydG; thiazole biosynthesis protein ThiH; iron-only hydrogenase maturation protein HydG 1813022 11561938 Clocl_1570 Clostridium clariflavum DSM 19732 iron-only hydrogenase maturation protein HydG YP_005046130.1 1811658 D 720554 CDS YP_005046131.1 374295940 11561939 complement(1813218..1814507) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 1814507 11561939 Clocl_1571 Clostridium clariflavum DSM 19732 transposase YP_005046131.1 1813218 R 720554 CDS YP_005046132.1 374295941 11561940 1814917..1816269 1 NC_016627.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; Protein of unknown function (DUF3343); TIGRFAM: iron-only hydrogenase maturation rSAM protein HydE; iron-only hydrogenase maturation protein HydE 1816269 11561940 Clocl_1572 Clostridium clariflavum DSM 19732 iron-only hydrogenase maturation protein HydE YP_005046132.1 1814917 D 720554 CDS YP_005046133.1 374295942 11561941 1816269..1817672 1 NC_016627.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase; aspartate ammonia-lyase 1817672 11561941 Clocl_1573 Clostridium clariflavum DSM 19732 aspartate ammonia-lyase YP_005046133.1 1816269 D 720554 CDS YP_005046134.1 374295943 11561942 1817674..1818897 1 NC_016627.1 PFAM: GTPase of unknown function; TIGRFAM: hydrogenase maturation GTPase HydF; small GTP-binding protein domain; hydrogenase maturation GTPase HydF 1818897 11561942 Clocl_1574 Clostridium clariflavum DSM 19732 hydrogenase maturation GTPase HydF YP_005046134.1 1817674 D 720554 CDS YP_005046135.1 374295944 11561943 1819036..1820181 1 NC_016627.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein; cysteine desulfurase 1820181 11561943 Clocl_1575 Clostridium clariflavum DSM 19732 cysteine desulfurase YP_005046135.1 1819036 D 720554 CDS YP_005046136.1 374295945 11561944 1820379..1821560 1 NC_016627.1 PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; Tfp pilus assembly protein, ATPase PilM 1821560 11561944 Clocl_1576 Clostridium clariflavum DSM 19732 Tfp pilus assembly protein, ATPase PilM YP_005046136.1 1820379 D 720554 CDS YP_005046137.1 374295946 11561945 1821750..1821908 1 NC_016627.1 hypothetical protein 1821908 11561945 Clocl_1577 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046137.1 1821750 D 720554 CDS YP_005046138.1 374295947 11561946 complement(1821999..1822586) 1 NC_016627.1 hypothetical protein 1822586 11561946 Clocl_1578 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046138.1 1821999 R 720554 CDS YP_005046139.1 374295948 11561947 1822955..1823605 1 NC_016627.1 hypothetical protein 1823605 11561947 Clocl_1579 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046139.1 1822955 D 720554 CDS YP_005046140.1 374295949 11561948 complement(1823602..1824936) 1 NC_016627.1 PFAM: PTS system sugar-specific permease component; phosphotransferase system, galactitol-specific IIC component 1824936 11561948 Clocl_1580 Clostridium clariflavum DSM 19732 phosphotransferase system, galactitol-specific IIC component YP_005046140.1 1823602 R 720554 CDS YP_005046141.1 374295950 11561949 1825192..1825686 1 NC_016627.1 hypothetical protein 1825686 11561949 Clocl_1581 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046141.1 1825192 D 720554 CDS YP_005046142.1 374295951 11561950 1825897..1826664 1 NC_016627.1 PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase 1826664 11561950 Clocl_1582 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_005046142.1 1825897 D 720554 CDS YP_005046143.1 374295952 11561951 1826657..1827475 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 1827475 11561951 Clocl_1583 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046143.1 1826657 D 720554 CDS YP_005046144.1 374295953 11561952 1827562..1828554 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 1828554 11561952 Clocl_1584 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005046144.1 1827562 D 720554 CDS YP_005046145.1 374295954 11561953 1828966..1829160 1 NC_016627.1 hypothetical protein 1829160 11561953 Clocl_1585 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046145.1 1828966 D 720554 CDS YP_005046146.1 374295955 11561954 1829238..1830836 1 NC_016627.1 PFAM: Subtilase family; subtilisin-like serine protease 1830836 11561954 Clocl_1586 Clostridium clariflavum DSM 19732 subtilisin-like serine protease YP_005046146.1 1829238 D 720554 CDS YP_005046147.1 374295956 11561955 1830827..1842016 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); Fibronectin type III domain; CARDB; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region; fibronectin type III domain-containing protein,CARDB domain-containing protein 1842016 11561955 Clocl_1587 Clostridium clariflavum DSM 19732 fibronectin type III domain-containing protein,CARDB domain-containing protein YP_005046147.1 1830827 D 720554 CDS YP_005046148.1 374295957 11561956 1842033..1842521 1 NC_016627.1 hypothetical protein 1842521 11561956 Clocl_1588 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046148.1 1842033 D 720554 CDS YP_005046149.1 374295958 11561958 1843464..1844132 1 NC_016627.1 hypothetical protein 1844132 11561958 Clocl_1590 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046149.1 1843464 D 720554 CDS YP_005046150.1 374295959 11561959 1844153..1844608 1 NC_016627.1 hypothetical protein 1844608 11561959 Clocl_1591 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046150.1 1844153 D 720554 CDS YP_005046151.1 374295960 11561960 complement(1844743..1844904) 1 NC_016627.1 hypothetical protein 1844904 11561960 Clocl_1592 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046151.1 1844743 R 720554 CDS YP_005046152.1 374295961 11561962 1846745..1848487 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1848487 11561962 Clocl_1594 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046152.1 1846745 D 720554 CDS YP_005046153.1 374295962 11561963 1848489..1848941 1 NC_016627.1 hypothetical protein 1848941 11561963 Clocl_1595 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046153.1 1848489 D 720554 CDS YP_005046154.1 374295963 11561964 1848971..1849345 1 NC_016627.1 hypothetical protein 1849345 11561964 Clocl_1596 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046154.1 1848971 D 720554 CDS YP_005046155.1 374295964 11561965 1849913..1851457 1 NC_016627.1 PFAM: Integrase core domain; transposase 1851457 11561965 Clocl_1597 Clostridium clariflavum DSM 19732 transposase YP_005046155.1 1849913 D 720554 CDS YP_005046156.1 374295965 11561966 1851454..1852230 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 1852230 11561966 Clocl_1598 Clostridium clariflavum DSM 19732 DNA replication protein YP_005046156.1 1851454 D 720554 CDS YP_005046157.1 374295966 11561969 1853432..1853884 1 NC_016627.1 hypothetical protein 1853884 11561969 Clocl_1601 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046157.1 1853432 D 720554 CDS YP_005046158.1 374295967 11561970 1853914..1854288 1 NC_016627.1 hypothetical protein 1854288 11561970 Clocl_1602 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046158.1 1853914 D 720554 CDS YP_005046159.1 374295968 11561971 1854625..1854978 1 NC_016627.1 hypothetical protein 1854978 11561971 Clocl_1603 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046159.1 1854625 D 720554 CDS YP_005046160.1 374295969 11561972 1854975..1855328 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1855328 11561972 Clocl_1604 Clostridium clariflavum DSM 19732 transposase YP_005046160.1 1854975 D 720554 CDS YP_005046161.1 374295970 11561973 join(1855404..1855655,1855655..1857010) 1 NC_016627.1 PFAM: Transposase IS66 family; manually curated; transposase 1857010 11561973 Clocl_1605 Clostridium clariflavum DSM 19732 transposase YP_005046161.1 1855404 D 720554 CDS YP_005046162.1 374295971 11561974 1857129..1857290 1 NC_016627.1 hypothetical protein 1857290 11561974 Clocl_1606 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046162.1 1857129 D 720554 CDS YP_005046163.1 374295972 11561975 1857433..1858038 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1858038 11561975 Clocl_1607 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046163.1 1857433 D 720554 CDS YP_005046164.1 374295973 11561976 1858038..1858763 1 NC_016627.1 hypothetical protein 1858763 11561976 Clocl_1608 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046164.1 1858038 D 720554 CDS YP_005046165.1 374295974 11561977 1858779..1859246 1 NC_016627.1 hypothetical protein 1859246 11561977 Clocl_1609 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046165.1 1858779 D 720554 CDS YP_005046166.1 374295975 11561978 1859403..1859762 1 NC_016627.1 hypothetical protein 1859762 11561978 Clocl_1610 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046166.1 1859403 D 720554 CDS YP_005046167.1 374295976 11561980 1861675..1862304 1 NC_016627.1 hypothetical protein 1862304 11561980 Clocl_1612 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046167.1 1861675 D 720554 CDS YP_005046168.1 374295977 11561982 1862672..1863271 1 NC_016627.1 hypothetical protein 1863271 11561982 Clocl_1614 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046168.1 1862672 D 720554 CDS YP_005046169.1 374295978 11561983 1863274..1864248 1 NC_016627.1 hypothetical protein 1864248 11561983 Clocl_1615 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046169.1 1863274 D 720554 CDS YP_005046170.1 374295979 11561984 complement(1864860..1866077) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 1866077 11561984 Clocl_1616 Clostridium clariflavum DSM 19732 transposase YP_005046170.1 1864860 R 720554 CDS YP_005046171.1 374295980 11561985 complement(1866220..1866504) 1 NC_016627.1 hypothetical protein 1866504 11561985 Clocl_1617 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046171.1 1866220 R 720554 CDS YP_005046172.1 374295981 11561987 complement(1868174..1868527) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1868527 11561987 Clocl_1619 Clostridium clariflavum DSM 19732 transposase YP_005046172.1 1868174 R 720554 CDS YP_005046173.1 374295982 11561988 complement(1868524..1868877) 1 NC_016627.1 PFAM: Transposase; Transposase 1868877 11561988 Clocl_1620 Clostridium clariflavum DSM 19732 Transposase YP_005046173.1 1868524 R 720554 CDS YP_005046174.1 374295983 11561989 1869043..1869282 1 NC_016627.1 hypothetical protein 1869282 11561989 Clocl_1621 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046174.1 1869043 D 720554 CDS YP_005046175.1 374295984 11561991 1870189..1870704 1 NC_016627.1 hypothetical protein 1870704 11561991 Clocl_1623 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046175.1 1870189 D 720554 CDS YP_005046176.1 374295985 11561992 1871077..1871370 1 NC_016627.1 PFAM: Transposase; transposase 1871370 11561992 Clocl_1624 Clostridium clariflavum DSM 19732 transposase YP_005046176.1 1871077 D 720554 CDS YP_005046177.1 374295986 11561993 1871330..1872229 1 NC_016627.1 PFAM: Integrase core domain; transposase 1872229 11561993 Clocl_1625 Clostridium clariflavum DSM 19732 transposase YP_005046177.1 1871330 D 720554 CDS YP_005046178.1 374295987 11561994 1872543..1873613 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 1873613 11561994 Clocl_1626 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005046178.1 1872543 D 720554 CDS YP_005046179.1 374295988 11561996 1874975..1875346 1 NC_016627.1 hypothetical protein 1875346 11561996 Clocl_1628 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046179.1 1874975 D 720554 CDS YP_005046180.1 374295989 11561997 1875512..1876489 1 NC_016627.1 hypothetical protein 1876489 11561997 Clocl_1629 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046180.1 1875512 D 720554 CDS YP_005046181.1 374295990 11562000 1877926..1878363 1 NC_016627.1 hypothetical protein 1878363 11562000 Clocl_1632 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046181.1 1877926 D 720554 CDS YP_005046182.1 374295991 11562001 1878606..1878911 1 NC_016627.1 hypothetical protein 1878911 11562001 Clocl_1633 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046182.1 1878606 D 720554 CDS YP_005046183.1 374295992 11562002 1879083..1879346 1 NC_016627.1 hypothetical protein 1879346 11562002 Clocl_1634 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046183.1 1879083 D 720554 CDS YP_005046184.1 374295993 11562003 1879473..1879961 1 NC_016627.1 hypothetical protein 1879961 11562003 Clocl_1635 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046184.1 1879473 D 720554 CDS YP_005046185.1 374295994 11562004 1880131..1881468 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1881468 11562004 Clocl_1636 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046185.1 1880131 D 720554 CDS YP_005046186.1 374295995 11562005 1881493..1882122 1 NC_016627.1 hypothetical protein 1882122 11562005 Clocl_1637 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046186.1 1881493 D 720554 CDS YP_005046187.1 374295996 11562007 1882826..1883179 1 NC_016627.1 PFAM: Transposase; Transposase 1883179 11562007 Clocl_1639 Clostridium clariflavum DSM 19732 Transposase YP_005046187.1 1882826 D 720554 CDS YP_005046188.1 374295997 11562008 1883176..1883529 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 1883529 11562008 Clocl_1640 Clostridium clariflavum DSM 19732 transposase YP_005046188.1 1883176 D 720554 CDS YP_005046189.1 374295998 11562010 complement(1885377..1886408) 1 NC_016627.1 PFAM: Transposase IS66 family; Insertion element protein; transposase 1886408 11562010 Clocl_1642 Clostridium clariflavum DSM 19732 transposase YP_005046189.1 1885377 R 720554 CDS YP_005046190.1 374295999 11562011 1886531..1886815 1 NC_016627.1 hypothetical protein 1886815 11562011 Clocl_1643 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046190.1 1886531 D 720554 CDS YP_005046191.1 374296000 11562012 1887040..1887843 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1887843 11562012 Clocl_1644 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046191.1 1887040 D 720554 CDS YP_005046192.1 374296001 11562013 1887843..1888568 1 NC_016627.1 hypothetical protein 1888568 11562013 Clocl_1645 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046192.1 1887843 D 720554 CDS YP_005046193.1 374296002 11562014 1888584..1889051 1 NC_016627.1 hypothetical protein 1889051 11562014 Clocl_1646 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046193.1 1888584 D 720554 CDS YP_005046194.1 374296003 11562015 1889208..1889567 1 NC_016627.1 hypothetical protein 1889567 11562015 Clocl_1647 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046194.1 1889208 D 720554 CDS YP_005046195.1 374296004 11562016 1889965..1891707 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1891707 11562016 Clocl_1648 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046195.1 1889965 D 720554 CDS YP_005046196.1 374296005 11562017 1891709..1892161 1 NC_016627.1 hypothetical protein 1892161 11562017 Clocl_1649 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046196.1 1891709 D 720554 CDS YP_005046197.1 374296006 11562018 1892191..1892565 1 NC_016627.1 hypothetical protein 1892565 11562018 Clocl_1650 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046197.1 1892191 D 720554 CDS YP_005046198.1 374296007 11562019 1892887..1894089 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; hypothetical protein 1894089 11562019 Clocl_1651 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046198.1 1892887 D 720554 CDS YP_005046199.1 374296008 11562020 1894223..1895689 1 NC_016627.1 PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; transposase 1895689 11562020 Clocl_1652 Clostridium clariflavum DSM 19732 transposase YP_005046199.1 1894223 D 720554 CDS YP_005046200.1 374296009 11562021 1895707..1896477 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 1896477 11562021 Clocl_1653 Clostridium clariflavum DSM 19732 DNA replication protein YP_005046200.1 1895707 D 720554 CDS YP_005046201.1 374296010 11562022 complement(1896684..1897229) 1 NC_016627.1 hypothetical protein 1897229 11562022 Clocl_1654 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046201.1 1896684 R 720554 CDS YP_005046202.1 374296011 11562023 1897742..1898929 1 NC_016627.1 PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain; putative paraquat-inducible protein B 1898929 11562023 Clocl_1655 Clostridium clariflavum DSM 19732 putative paraquat-inducible protein B YP_005046202.1 1897742 D 720554 CDS YP_005046203.1 374296012 11562024 1899151..1899432 1 NC_016627.1 hypothetical protein 1899432 11562024 Clocl_1656 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046203.1 1899151 D 720554 CDS YP_005046204.1 374296013 11562025 1900377..1901696 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM additional 4Fe4S-binding domain protein 1901696 11562025 Clocl_1657 Clostridium clariflavum DSM 19732 radical SAM additional 4Fe4S-binding domain protein YP_005046204.1 1900377 D 720554 CDS YP_005046205.1 374296014 11562026 1901772..1901945 1 NC_016627.1 hypothetical protein 1901945 11562026 Clocl_1658 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046205.1 1901772 D 720554 CDS YP_005046206.1 374296015 11562027 1902209..1902325 1 NC_016627.1 hypothetical protein 1902325 11562027 Clocl_1659 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046206.1 1902209 D 720554 CDS YP_005046207.1 374296016 11562028 1902736..1903317 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 1903317 11562028 Clocl_1660 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005046207.1 1902736 D 720554 CDS YP_005046208.1 374296017 11562029 1903505..1904368 1 NC_016627.1 manually curated; hypothetical protein 1904368 11562029 Clocl_1661 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046208.1 1903505 D 720554 CDS YP_005046209.1 374296018 11562030 1904426..1904614 1 NC_016627.1 manually curated; hypothetical protein 1904614 11562030 Clocl_1662 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046209.1 1904426 D 720554 CDS YP_005046210.1 374296019 11562032 1905331..1906164 1 NC_016627.1 PFAM: 3D domain; hypothetical protein 1906164 11562032 Clocl_1664 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046210.1 1905331 D 720554 CDS YP_005046211.1 374296020 11562033 1906535..1907155 1 NC_016627.1 PFAM: RecX family; hypothetical protein 1907155 11562033 Clocl_1665 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046211.1 1906535 D 720554 CDS YP_005046212.1 374296021 11562034 1907251..1907502 1 NC_016627.1 hypothetical protein 1907502 11562034 Clocl_1666 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046212.1 1907251 D 720554 CDS YP_005046213.1 374296022 11562035 1907730..1908287 1 NC_016627.1 PFAM: Domain of unknown function DUF; hypothetical protein 1908287 11562035 Clocl_1667 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046213.1 1907730 D 720554 CDS YP_005046214.1 374296023 11562036 1908461..1909210 1 NC_016627.1 PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1909210 11562036 Clocl_1668 Clostridium clariflavum DSM 19732 N-acetylmuramoyl-L-alanine amidase YP_005046214.1 1908461 D 720554 CDS YP_005046215.1 374296024 11562037 1909399..1910106 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 1910106 11562037 Clocl_1669 Clostridium clariflavum DSM 19732 Zn-dependent hydrolase YP_005046215.1 1909399 D 720554 CDS YP_005046216.1 374296025 11562038 1910372..1911367 1 NC_016627.1 PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 1911367 11562038 Clocl_1670 Clostridium clariflavum DSM 19732 tetratricopeptide repeat protein YP_005046216.1 1910372 D 720554 CDS YP_005046217.1 374296026 11562039 complement(1911504..1914413) 1 NC_016627.1 PFAM: Fibronectin type III domain; fibronectin type III domain-containing protein 1914413 11562039 Clocl_1671 Clostridium clariflavum DSM 19732 fibronectin type III domain-containing protein YP_005046217.1 1911504 R 720554 CDS YP_005046218.1 374296027 11562040 complement(1914855..1915406) 1 NC_016627.1 hypothetical protein 1915406 11562040 Clocl_1672 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046218.1 1914855 R 720554 CDS YP_005046219.1 374296028 11562043 1916075..1916623 1 NC_016627.1 PFAM: Nucleotidyltransferase domain; nucleotidyltransferase family protein 1916623 11562043 Clocl_1675 Clostridium clariflavum DSM 19732 nucleotidyltransferase family protein YP_005046219.1 1916075 D 720554 CDS YP_005046220.1 374296029 11562044 1916891..1918285 1 NC_016627.1 PFAM: Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1918285 11562044 Clocl_1676 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_005046220.1 1916891 D 720554 CDS YP_005046221.1 374296030 11562045 complement(1918607..1919305) 1 NC_016627.1 PFAM: Methyltransferase domain; methyltransferase family protein 1919305 11562045 Clocl_1677 Clostridium clariflavum DSM 19732 methyltransferase family protein YP_005046221.1 1918607 R 720554 CDS YP_005046222.1 374296031 11562049 1920074..1921093 1 NC_016627.1 PFAM: M42 glutamyl aminopeptidase; peptidase family protein 1921093 11562049 Clocl_1681 Clostridium clariflavum DSM 19732 peptidase family protein YP_005046222.1 1920074 D 720554 CDS YP_005046223.1 374296032 11562050 1921190..1922215 1 NC_016627.1 PFAM: M42 glutamyl aminopeptidase; peptidase family protein 1922215 11562050 Clocl_1682 Clostridium clariflavum DSM 19732 peptidase family protein YP_005046223.1 1921190 D 720554 CDS YP_005046224.1 374296033 11562051 1922275..1923252 1 NC_016627.1 PFAM: M42 glutamyl aminopeptidase; peptidase family protein 1923252 11562051 Clocl_1683 Clostridium clariflavum DSM 19732 peptidase family protein YP_005046224.1 1922275 D 720554 CDS YP_005046225.1 374296034 11562052 1923314..1924324 1 NC_016627.1 hypothetical protein 1924324 11562052 Clocl_1684 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046225.1 1923314 D 720554 CDS YP_005046226.1 374296035 11562053 complement(1924346..1925137) 1 NC_016627.1 PFAM: DUF218 domain; hypothetical protein 1925137 11562053 Clocl_1685 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046226.1 1924346 R 720554 CDS YP_005046227.1 374296036 11562054 1925504..1927129 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; putative exonuclease of the beta-lactamase fold involved in RNA processing 1927129 11562054 Clocl_1686 Clostridium clariflavum DSM 19732 putative exonuclease of the beta-lactamase fold involved in RNA processing YP_005046227.1 1925504 D 720554 CDS YP_005046228.1 374296037 11562055 1927656..1928327 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 1928327 11562055 Clocl_1687 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005046228.1 1927656 D 720554 CDS YP_005046229.1 374296038 11562056 1928473..1929222 1 NC_016627.1 PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/carnithine racemase 1929222 11562056 Clocl_1688 Clostridium clariflavum DSM 19732 enoyl-CoA hydratase/carnithine racemase YP_005046229.1 1928473 D 720554 CDS YP_005046230.1 374296039 11562058 1929990..1930697 1 NC_016627.1 hypothetical protein 1930697 11562058 Clocl_1690 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046230.1 1929990 D 720554 CDS YP_005046231.1 374296040 11562060 1931511..1932809 1 NC_016627.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 1932809 11562060 Clocl_1692 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005046231.1 1931511 D 720554 CDS YP_005046232.1 374296041 11562062 1933237..1933413 1 NC_016627.1 hypothetical protein 1933413 11562062 Clocl_1694 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046232.1 1933237 D 720554 CDS YP_005046233.1 374296042 11562063 1933428..1935020 1 NC_016627.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction-modification system methyltransferase subunit 1935020 11562063 Clocl_1695 Clostridium clariflavum DSM 19732 type I restriction-modification system methyltransferase subunit YP_005046233.1 1933428 D 720554 CDS YP_005046234.1 374296043 11562064 1935017..1936093 1 NC_016627.1 PFAM: Type I restriction modification DNA specificity domain; restriction endonuclease S subunit 1936093 11562064 Clocl_1696 Clostridium clariflavum DSM 19732 restriction endonuclease S subunit YP_005046234.1 1935017 D 720554 CDS YP_005046235.1 374296044 11562065 1936107..1937129 1 NC_016627.1 hypothetical protein 1937129 11562065 Clocl_1697 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046235.1 1936107 D 720554 CDS YP_005046236.1 374296045 11562066 1937122..1940337 1 NC_016627.1 PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; manually curated; HsdR family type I site-specific deoxyribonuclease 1940337 11562066 Clocl_1698 Clostridium clariflavum DSM 19732 HsdR family type I site-specific deoxyribonuclease YP_005046236.1 1937122 D 720554 CDS YP_005046237.1 374296046 11562067 1940413..1943229 1 NC_016627.1 hypothetical protein 1943229 11562067 Clocl_1699 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046237.1 1940413 D 720554 CDS YP_005046238.1 374296047 11562068 1943226..1947989 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; helicase family protein with metal-binding cysteine cluster 1947989 11562068 Clocl_1700 Clostridium clariflavum DSM 19732 helicase family protein with metal-binding cysteine cluster YP_005046238.1 1943226 D 720554 CDS YP_005046239.1 374296048 11562070 1948648..1949103 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 1949103 11562070 Clocl_1702 Clostridium clariflavum DSM 19732 transposase YP_005046239.1 1948648 D 720554 CDS YP_005046240.1 374296049 11562071 1949359..1950831 1 NC_016627.1 PFAM: Integrase core domain; transposase 1950831 11562071 Clocl_1703 Clostridium clariflavum DSM 19732 transposase YP_005046240.1 1949359 D 720554 CDS YP_005046241.1 374296050 11562072 1950824..1951510 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 1951510 11562072 Clocl_1704 Clostridium clariflavum DSM 19732 DNA replication protein YP_005046241.1 1950824 D 720554 CDS YP_005046242.1 374296051 11562074 1952474..1953328 1 NC_016627.1 phosphate ABC transporter substrate-binding protein 1953328 11562074 Clocl_1706 Clostridium clariflavum DSM 19732 phosphate ABC transporter substrate-binding protein YP_005046242.1 1952474 D 720554 CDS YP_005046243.1 374296052 11562075 1953398..1954252 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA; phosphate ABC transporter membrane protein 1954252 11562075 Clocl_1707 Clostridium clariflavum DSM 19732 phosphate ABC transporter membrane protein YP_005046243.1 1953398 D 720554 CDS YP_005046244.1 374296053 11562076 1954252..1955127 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter membrane protein 1955127 11562076 Clocl_1708 Clostridium clariflavum DSM 19732 phosphate ABC transporter membrane protein YP_005046244.1 1954252 D 720554 CDS YP_005046245.1 374296054 11562077 1955237..1955986 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein 1955986 11562077 Clocl_1709 Clostridium clariflavum DSM 19732 phosphate ABC transporter ATP-binding protein YP_005046245.1 1955237 D 720554 CDS YP_005046246.1 374296055 11562078 1955986..1956636 1 NC_016627.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 1956636 11562078 Clocl_1710 Clostridium clariflavum DSM 19732 phosphate uptake regulator PhoU YP_005046246.1 1955986 D 720554 CDS YP_005046247.1 374296056 11562079 1956633..1957307 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 1957307 11562079 Clocl_1711 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005046247.1 1956633 D 720554 CDS YP_005046248.1 374296057 11562080 1957304..1958974 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain S-box 1958974 11562080 Clocl_1712 Clostridium clariflavum DSM 19732 PAS domain S-box YP_005046248.1 1957304 D 720554 CDS YP_005046249.1 374296058 11562081 1959282..1959821 1 NC_016627.1 2'-5' RNA ligase 1959821 11562081 Clocl_1713 Clostridium clariflavum DSM 19732 2'-5' RNA ligase YP_005046249.1 1959282 D 720554 CDS YP_005046250.1 374296059 11562082 1960097..1960591 1 NC_016627.1 hypothetical protein 1960591 11562082 Clocl_1714 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046250.1 1960097 D 720554 CDS YP_005046251.1 374296060 11562083 1961778..1962497 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 1962497 11562083 Clocl_1715 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005046251.1 1961778 D 720554 CDS YP_005046252.1 374296061 11562084 1962494..1963147 1 NC_016627.1 hypothetical protein 1963147 11562084 Clocl_1716 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046252.1 1962494 D 720554 CDS YP_005046253.1 374296062 11562085 1963162..1963602 1 NC_016627.1 PFAM: Helix-turn-helix; SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; looped-hinge helix DNA binding domain, AbrB family 1963602 11562085 Clocl_1717 Clostridium clariflavum DSM 19732 looped-hinge helix DNA binding domain, AbrB family YP_005046253.1 1963162 D 720554 CDS YP_005046254.1 374296063 11562086 1964015..1965193 1 NC_016627.1 PFAM: Aldo/keto reductase family; putative oxidoreductase of aldo/keto reductase family 1965193 11562086 Clocl_1718 Clostridium clariflavum DSM 19732 putative oxidoreductase of aldo/keto reductase family YP_005046254.1 1964015 D 720554 CDS YP_005046255.1 374296064 11562087 1965429..1967171 1 NC_016627.1 PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase 1967171 11562087 Clocl_1719 Clostridium clariflavum DSM 19732 AMP-forming long-chain acyl-CoA synthetase YP_005046255.1 1965429 D 720554 CDS YP_005046256.1 374296065 11562088 complement(1967390..1967806) 1 NC_016627.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; cytidine deaminase 1967806 11562088 Clocl_1720 Clostridium clariflavum DSM 19732 cytidine deaminase YP_005046256.1 1967390 R 720554 CDS YP_005046257.1 374296066 11562089 complement(1967862..1968797) 1 NC_016627.1 PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease 1968797 11562089 Clocl_1721 Clostridium clariflavum DSM 19732 ABC transporter permease YP_005046257.1 1967862 R 720554 CDS YP_005046258.1 374296067 11562090 complement(1968797..1969915) 1 NC_016627.1 PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease 1969915 11562090 Clocl_1722 Clostridium clariflavum DSM 19732 ABC transporter permease YP_005046258.1 1968797 R 720554 CDS YP_005046259.1 374296068 11562091 complement(1969899..1971452) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter ATPase 1971452 11562091 Clocl_1723 Clostridium clariflavum DSM 19732 ABC transporter ATPase YP_005046259.1 1969899 R 720554 CDS YP_005046260.1 374296069 11562092 complement(1971526..1972368) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: glycine radical enzyme activase, YjjW family; glycine radical enzyme activase, YjjW family 1972368 11562092 Clocl_1724 Clostridium clariflavum DSM 19732 glycine radical enzyme activase, YjjW family YP_005046260.1 1971526 R 720554 CDS YP_005046261.1 374296070 11562093 complement(1972371..1973900) 1 NC_016627.1 PFAM: Protein of unknown function (DUF3029); TIGRFAM: glycine radical enzyme, YjjI family; glycine radical enzyme, YjjI family 1973900 11562093 Clocl_1725 Clostridium clariflavum DSM 19732 glycine radical enzyme, YjjI family YP_005046261.1 1972371 R 720554 CDS YP_005046262.1 374296071 11562094 complement(1973970..1975028) 1 NC_016627.1 PFAM: Basic membrane protein; putative ABC-type transport system, periplasmic component/surface lipoprotein 1975028 11562094 Clocl_1726 Clostridium clariflavum DSM 19732 putative ABC-type transport system, periplasmic component/surface lipoprotein YP_005046262.1 1973970 R 720554 CDS YP_005046263.1 374296072 11562095 complement(1975112..1975822) 1 NC_016627.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); purine-nucleoside phosphorylase, DeoD family 1975822 11562095 Clocl_1727 Clostridium clariflavum DSM 19732 purine-nucleoside phosphorylase, DeoD family YP_005046263.1 1975112 R 720554 CDS YP_005046264.1 374296073 11562097 1976261..1977031 1 NC_016627.1 PFAM: Phosphorylase superfamily; uridine phosphorylase 1977031 11562097 Clocl_1729 Clostridium clariflavum DSM 19732 uridine phosphorylase YP_005046264.1 1976261 D 720554 CDS YP_005046265.1 374296074 11562099 1977600..1978079 1 NC_016627.1 PFAM: AIG2-like family; cation transport protein 1978079 11562099 Clocl_1731 Clostridium clariflavum DSM 19732 cation transport protein YP_005046265.1 1977600 D 720554 CDS YP_005046266.1 374296075 11562100 complement(1978112..1979341) 1 NC_016627.1 PFAM: S-adenosylmethionine-dependent methyltransferase; putative SAM-dependent methyltransferase 1979341 11562100 Clocl_1732 Clostridium clariflavum DSM 19732 putative SAM-dependent methyltransferase YP_005046266.1 1978112 R 720554 CDS YP_005046267.1 374296076 11562101 1979791..1981527 1 NC_016627.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; indolepyruvate ferredoxin oxidoreductase subunit alpha 1981527 11562101 Clocl_1733 Clostridium clariflavum DSM 19732 indolepyruvate ferredoxin oxidoreductase subunit alpha YP_005046267.1 1979791 D 720554 CDS YP_005046268.1 374296077 11562102 1981531..1982103 1 NC_016627.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; indolepyruvate ferredoxin oxidoreductase subunit beta 1982103 11562102 Clocl_1734 Clostridium clariflavum DSM 19732 indolepyruvate ferredoxin oxidoreductase subunit beta YP_005046268.1 1981531 D 720554 CDS YP_005046269.1 374296078 11562103 1982156..1983460 1 NC_016627.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase; coenzyme F390 synthetase 1983460 11562103 Clocl_1735 Clostridium clariflavum DSM 19732 coenzyme F390 synthetase YP_005046269.1 1982156 D 720554 CDS YP_005046270.1 374296079 11562104 1983499..1983930 1 NC_016627.1 PFAM: ACT domain; ACT domain-containing protein 1983930 11562104 Clocl_1736 Clostridium clariflavum DSM 19732 ACT domain-containing protein YP_005046270.1 1983499 D 720554 CDS YP_005046271.1 374296080 11562105 1984036..1985328 1 NC_016627.1 PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; AAA ATPase 1985328 11562105 Clocl_1737 Clostridium clariflavum DSM 19732 AAA ATPase YP_005046271.1 1984036 D 720554 CDS YP_005046272.1 374296081 11562106 complement(1985509..1985796) 1 NC_016627.1 hypothetical protein 1985796 11562106 Clocl_1738 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046272.1 1985509 R 720554 CDS YP_005046273.1 374296082 11562107 1986134..1987000 1 NC_016627.1 hypothetical protein 1987000 11562107 Clocl_1739 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046273.1 1986134 D 720554 CDS YP_005046274.1 374296083 11562108 1987298..1988725 1 NC_016627.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 1988725 11562108 Clocl_1740 Clostridium clariflavum DSM 19732 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB YP_005046274.1 1987298 D 720554 CDS YP_005046275.1 374296084 11562109 1988955..1989341 1 NC_016627.1 PFAM: Protein of unknown function (DUF964); hypothetical protein 1989341 11562109 Clocl_1741 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046275.1 1988955 D 720554 CDS YP_005046276.1 374296085 11562110 1989458..1992076 1 NC_016627.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 1992076 11562110 Clocl_1742 Clostridium clariflavum DSM 19732 DNA mismatch repair protein MutS YP_005046276.1 1989458 D 720554 CDS YP_005046277.1 374296086 11562111 1992140..1994329 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; manually curated; DNA mismatch repair protein MutL 1994329 11562111 Clocl_1743 Clostridium clariflavum DSM 19732 DNA mismatch repair protein MutL YP_005046277.1 1992140 D 720554 CDS YP_005046278.1 374296087 11562112 1994517..1995458 1 NC_016627.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA isopentenyltransferase MiaA 1995458 11562112 Clocl_1744 Clostridium clariflavum DSM 19732 tRNA isopentenyltransferase MiaA YP_005046278.1 1994517 D 720554 CDS YP_005046279.1 374296088 11562113 1995665..1995916 1 NC_016627.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; RNA-binding protein Hfq 1995916 11562113 Clocl_1745 Clostridium clariflavum DSM 19732 RNA-binding protein Hfq YP_005046279.1 1995665 D 720554 CDS YP_005046280.1 374296089 11562114 complement(1996121..1996756) 1 NC_016627.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; manually curated; SOS regulatory protein LexA 1996756 11562114 Clocl_1746 Clostridium clariflavum DSM 19732 SOS regulatory protein LexA YP_005046280.1 1996121 R 720554 CDS YP_005046281.1 374296090 11562115 1997052..1997339 1 NC_016627.1 PFAM: LysM domain; LysM domain-containing protein 1997339 11562115 Clocl_1747 Clostridium clariflavum DSM 19732 LysM domain-containing protein YP_005046281.1 1997052 D 720554 CDS YP_005046282.1 374296091 11562116 1997662..1998330 1 NC_016627.1 PFAM: TadE-like protein; TadE-like protein 1998330 11562116 Clocl_1748 Clostridium clariflavum DSM 19732 TadE-like protein YP_005046282.1 1997662 D 720554 CDS YP_005046283.1 374296092 11562117 1998418..2001585 1 NC_016627.1 manually curated; hypothetical protein 2001585 11562117 Clocl_1749 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046283.1 1998418 D 720554 CDS YP_005046284.1 374296093 11562118 2001638..2002861 1 NC_016627.1 PFAM: TadE-like protein; TadE-like protein 2002861 11562118 Clocl_1750 Clostridium clariflavum DSM 19732 TadE-like protein YP_005046284.1 2001638 D 720554 CDS YP_005046285.1 374296094 11562119 2003009..2003512 1 NC_016627.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; hypothetical protein 2003512 11562119 Clocl_1751 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046285.1 2003009 D 720554 CDS YP_005046286.1 374296095 11562120 2003786..2004367 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2004367 11562120 Clocl_1752 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005046286.1 2003786 D 720554 CDS YP_005046287.1 374296096 11562121 2004371..2004793 1 NC_016627.1 hypothetical protein 2004793 11562121 Clocl_1753 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046287.1 2004371 D 720554 CDS YP_005046288.1 374296097 11562122 2004797..2005441 1 NC_016627.1 PFAM: Protein of unknown function (DUF2953); manually curated; hypothetical protein 2005441 11562122 Clocl_1754 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046288.1 2004797 D 720554 CDS YP_005046289.1 374296098 11562123 2005431..2005826 1 NC_016627.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ); hypothetical protein 2005826 11562123 Clocl_1755 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046289.1 2005431 D 720554 CDS YP_005046290.1 374296099 11562124 2006068..2006463 1 NC_016627.1 hypothetical protein 2006463 11562124 Clocl_1756 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046290.1 2006068 D 720554 CDS YP_005046291.1 374296100 11562125 2006574..2007179 1 NC_016627.1 hypothetical protein 2007179 11562125 Clocl_1757 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046291.1 2006574 D 720554 CDS YP_005046292.1 374296101 11562126 2007313..2007666 1 NC_016627.1 PFAM: Putative helix-turn-helix protein, YlxM / p13 like; manually curated; hypothetical protein 2007666 11562126 Clocl_1758 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046292.1 2007313 D 720554 CDS YP_005046293.1 374296102 11562127 2007771..2009123 1 NC_016627.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle protein; signal recognition particle protein 2009123 11562127 Clocl_1759 Clostridium clariflavum DSM 19732 signal recognition particle protein YP_005046293.1 2007771 D 720554 CDS YP_005046294.1 374296103 11562128 2009161..2009406 1 NC_016627.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 2009406 11562128 Clocl_1760 Clostridium clariflavum DSM 19732 30S ribosomal protein S16 YP_005046294.1 2009161 D 720554 CDS YP_005046295.1 374296104 11562129 2009451..2009681 1 NC_016627.1 PFAM: KH domain; putative RNA-binding protein (contains KH domain) 2009681 11562129 Clocl_1761 Clostridium clariflavum DSM 19732 putative RNA-binding protein (contains KH domain) YP_005046295.1 2009451 D 720554 CDS YP_005046296.1 374296105 11562130 2009797..2010321 1 NC_016627.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein RimM 2010321 11562130 Clocl_1762 Clostridium clariflavum DSM 19732 16S rRNA processing protein RimM YP_005046296.1 2009797 D 720554 CDS YP_005046297.1 374296106 11562131 2010308..2011060 1 NC_016627.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (guanine-N1)-methyltransferase 2011060 11562131 Clocl_1763 Clostridium clariflavum DSM 19732 tRNA (guanine-N1)-methyltransferase YP_005046297.1 2010308 D 720554 CDS YP_005046298.1 374296107 11562132 2011260..2012798 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2012798 11562132 Clocl_1764 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005046298.1 2011260 D 720554 CDS YP_005046299.1 374296108 11562133 2013208..2013786 1 NC_016627.1 PFAM: Chromate transporter; chromate transport protein ChrA 2013786 11562133 Clocl_1765 Clostridium clariflavum DSM 19732 chromate transport protein ChrA YP_005046299.1 2013208 D 720554 CDS YP_005046300.1 374296109 11562134 2013783..2014346 1 NC_016627.1 PFAM: Chromate transporter; chromate transport protein ChrA 2014346 11562134 Clocl_1766 Clostridium clariflavum DSM 19732 chromate transport protein ChrA YP_005046300.1 2013783 D 720554 CDS YP_005046301.1 374296110 11562136 2017688..2018275 1 NC_016627.1 hypothetical protein 2018275 11562136 Clocl_1768 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046301.1 2017688 D 720554 CDS YP_005046302.1 374296111 11562137 2018970..2020367 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 2020367 11562137 Clocl_1769 Clostridium clariflavum DSM 19732 putative efflux protein, MATE family YP_005046302.1 2018970 D 720554 CDS YP_005046303.1 374296112 11562138 2020813..2021136 1 NC_016627.1 hypothetical protein 2021136 11562138 Clocl_1770 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046303.1 2020813 D 720554 CDS YP_005046304.1 374296113 11562139 complement(2021290..2022057) 1 NC_016627.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 2022057 11562139 Clocl_1771 Clostridium clariflavum DSM 19732 Imidazole glycerol phosphate synthase cyclase subunit YP_005046304.1 2021290 R 720554 CDS YP_005046305.1 374296114 11562140 2022653..2023510 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; periplasmic component of amino acid ABC-type transporter/signal transduction system 2023510 11562140 Clocl_1772 Clostridium clariflavum DSM 19732 periplasmic component of amino acid ABC-type transporter/signal transduction system YP_005046305.1 2022653 D 720554 CDS YP_005046306.1 374296115 11562141 2023750..2024184 1 NC_016627.1 hypothetical protein 2024184 11562141 Clocl_1773 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046306.1 2023750 D 720554 CDS YP_005046307.1 374296116 11562142 2024239..2024955 1 NC_016627.1 hypothetical protein 2024955 11562142 Clocl_1774 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046307.1 2024239 D 720554 CDS YP_005046308.1 374296117 11562143 2025153..2025398 1 NC_016627.1 hypothetical protein 2025398 11562143 Clocl_1775 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046308.1 2025153 D 720554 CDS YP_005046309.1 374296118 11562144 2025413..2025703 1 NC_016627.1 PFAM: Chorismate mutase type II; chorismate mutase 2025703 11562144 Clocl_1776 Clostridium clariflavum DSM 19732 chorismate mutase YP_005046309.1 2025413 D 720554 CDS YP_005046310.1 374296119 11562145 2025675..2025800 1 NC_016627.1 hypothetical protein 2025800 11562145 Clocl_1777 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046310.1 2025675 D 720554 CDS YP_005046311.1 374296120 11562146 2026270..2038458 1 NC_016627.1 PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain; chitin-binding domain-containing protein 2038458 11562146 Clocl_1778 Clostridium clariflavum DSM 19732 chitin-binding domain-containing protein YP_005046311.1 2026270 D 720554 CDS YP_005046312.1 374296121 11562147 2038467..2039690 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; manually curated; methyl-accepting chemotaxis protein 2039690 11562147 Clocl_1779 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005046312.1 2038467 D 720554 CDS YP_005046313.1 374296122 11562148 2039961..2040782 1 NC_016627.1 PFAM: VanW like protein; putative vancomycin resistance protein 2040782 11562148 Clocl_1780 Clostridium clariflavum DSM 19732 putative vancomycin resistance protein YP_005046313.1 2039961 D 720554 CDS YP_005046314.1 374296123 11562149 2040816..2041616 1 NC_016627.1 hypothetical protein 2041616 11562149 Clocl_1781 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046314.1 2040816 D 720554 CDS YP_005046315.1 374296124 11562150 2041722..2042690 1 NC_016627.1 PFAM: Protein of unknown function (DUF3298); manually curated; hypothetical protein 2042690 11562150 Clocl_1782 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046315.1 2041722 D 720554 CDS YP_005046316.1 374296125 11562151 2042955..2044142 1 NC_016627.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase; manually curated; glutamyl-tRNA reductase 2044142 11562151 Clocl_1783 Clostridium clariflavum DSM 19732 glutamyl-tRNA reductase YP_005046316.1 2042955 D 720554 CDS YP_005046317.1 374296126 11562152 2044208..2044699 1 NC_016627.1 PFAM: TrkA-N domain; TIGRFAM: siroheme synthase, N-terminal domain; siroheme synthase 2044699 11562152 Clocl_1784 Clostridium clariflavum DSM 19732 siroheme synthase YP_005046317.1 2044208 D 720554 CDS YP_005046318.1 374296127 11562153 2044696..2045586 1 NC_016627.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; hydroxymethylbilane synthase 2045586 11562153 Clocl_1785 Clostridium clariflavum DSM 19732 hydroxymethylbilane synthase YP_005046318.1 2044696 D 720554 CDS YP_005046319.1 374296128 11562154 2045568..2047070 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrinogen-III C-methyltransferase, uroporphyrinogen-III synthase 2047070 11562154 Clocl_1786 Clostridium clariflavum DSM 19732 uroporphyrinogen-III C-methyltransferase, uroporphyrinogen-III synthase YP_005046319.1 2045568 D 720554 CDS YP_005046320.1 374296129 11562155 2047063..2048043 1 NC_016627.1 PFAM: Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 2048043 11562155 Clocl_1787 Clostridium clariflavum DSM 19732 delta-aminolevulinic acid dehydratase YP_005046320.1 2047063 D 720554 CDS YP_005046321.1 374296130 11562156 2048043..2049326 1 NC_016627.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 2049326 11562156 Clocl_1788 Clostridium clariflavum DSM 19732 glutamate-1-semialdehyde-2,1-aminomutase YP_005046321.1 2048043 D 720554 CDS YP_005046322.1 374296131 11562157 2049411..2049773 1 NC_016627.1 PFAM: CbiX; hypothetical protein 2049773 11562157 Clocl_1789 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046322.1 2049411 D 720554 CDS YP_005046323.1 374296132 11562158 2049795..2050820 1 NC_016627.1 PFAM: chorismate binding enzyme; anthranilate/para-aminobenzoate synthase component I 2050820 11562158 Clocl_1790 Clostridium clariflavum DSM 19732 anthranilate/para-aminobenzoate synthase component I YP_005046323.1 2049795 D 720554 CDS YP_005046324.1 374296133 11562159 2050804..2051397 1 NC_016627.1 PFAM: Aminotransferase class IV; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 2051397 11562159 Clocl_1791 Clostridium clariflavum DSM 19732 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005046324.1 2050804 D 720554 CDS YP_005046325.1 374296134 11562160 2051687..2052646 1 NC_016627.1 hypothetical protein 2052646 11562160 Clocl_1792 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046325.1 2051687 D 720554 CDS YP_005046326.1 374296135 11562161 2053033..2054598 1 NC_016627.1 PFAM: Integrase core domain; transposase 2054598 11562161 Clocl_1793 Clostridium clariflavum DSM 19732 transposase YP_005046326.1 2053033 D 720554 CDS YP_005046327.1 374296136 11562162 2054576..2055334 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 2055334 11562162 Clocl_1794 Clostridium clariflavum DSM 19732 DNA replication protein YP_005046327.1 2054576 D 720554 CDS YP_005046328.1 374296137 11562163 2055585..2057189 1 NC_016627.1 PFAM: Dockerin type I repeat; O-Glycosyl hydrolase family 30; O-glycosyl hydrolase 2057189 11562163 Clocl_1795 Clostridium clariflavum DSM 19732 O-glycosyl hydrolase YP_005046328.1 2055585 D 720554 CDS YP_005046329.1 374296138 11562164 complement(2057676..2058548) 1 NC_016627.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 2058548 11562164 Clocl_1796 Clostridium clariflavum DSM 19732 dihydrodipicolinate reductase YP_005046329.1 2057676 R 720554 CDS YP_005046330.1 374296139 11562165 2059385..2060368 1 NC_016627.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; site-specific recombinase XerD 2060368 11562165 Clocl_1797 Clostridium clariflavum DSM 19732 site-specific recombinase XerD YP_005046330.1 2059385 D 720554 CDS YP_005046331.1 374296140 11562166 complement(2060484..2060747) 1 NC_016627.1 hypothetical protein 2060747 11562166 Clocl_1798 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046331.1 2060484 R 720554 CDS YP_005046332.1 374296141 11562167 complement(2061114..2065067) 1 NC_016627.1 PFAM: Cohesin domain; Cohesin domain protein 2065067 11562167 Clocl_1799 Clostridium clariflavum DSM 19732 Cohesin domain protein YP_005046332.1 2061114 R 720554 CDS YP_005046333.1 374296142 11562168 complement(2065849..2066538) 1 NC_016627.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; phosphopantetheine--protein transferase 2066538 11562168 Clocl_1800 Clostridium clariflavum DSM 19732 phosphopantetheine--protein transferase YP_005046333.1 2065849 R 720554 CDS YP_005046334.1 374296143 11562169 2066801..2068492 1 NC_016627.1 hypothetical protein 2068492 11562169 Clocl_1801 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046334.1 2066801 D 720554 CDS YP_005046335.1 374296144 11562170 complement(2068503..2069240) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator 2069240 11562170 Clocl_1802 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005046335.1 2068503 R 720554 CDS YP_005046336.1 374296145 11562171 complement(2069721..2071148) 1 NC_016627.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 2071148 11562171 Clocl_1803 Clostridium clariflavum DSM 19732 adenylosuccinate lyase YP_005046336.1 2069721 R 720554 CDS YP_005046337.1 374296146 11562172 complement(2071436..2072623) 1 NC_016627.1 PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 2072623 11562172 Clocl_1804 Clostridium clariflavum DSM 19732 aspartate/tyrosine/aromatic aminotransferase YP_005046337.1 2071436 R 720554 CDS YP_005046338.1 374296147 11562173 complement(2073129..2074064) 1 NC_016627.1 PFAM: Membrane dipeptidase (Peptidase family M19); Zn-dependent dipeptidase, microsomal dipeptidase 2074064 11562173 Clocl_1805 Clostridium clariflavum DSM 19732 Zn-dependent dipeptidase, microsomal dipeptidase YP_005046338.1 2073129 R 720554 CDS YP_005046339.1 374296148 11562174 complement(2074394..2076784) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; dockerin-like protein 2076784 11562174 Clocl_1806 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046339.1 2074394 R 720554 CDS YP_005046340.1 374296149 11562175 complement(2077195..2077890) 1 NC_016627.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein radc 2077890 11562175 Clocl_1807 Clostridium clariflavum DSM 19732 DNA repair protein radc YP_005046340.1 2077195 R 720554 CDS YP_005046341.1 374296150 11562176 complement(2078006..2078389) 1 NC_016627.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; putative endonuclease related to Holliday junction resolvase 2078389 11562176 Clocl_1808 Clostridium clariflavum DSM 19732 putative endonuclease related to Holliday junction resolvase YP_005046341.1 2078006 R 720554 CDS YP_005046342.1 374296151 11562177 complement(2078374..2078670) 1 NC_016627.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein; flagellar protein FhlB-like protein 2078670 11562177 Clocl_1809 Clostridium clariflavum DSM 19732 flagellar protein FhlB-like protein YP_005046342.1 2078374 R 720554 CDS YP_005046343.1 374296152 11562178 complement(2078693..2080357) 1 NC_016627.1 PFAM: Flagellar hook-length control protein FliK; manually curated; Flagellar hook-length control protein FliK 2080357 11562178 Clocl_1810 Clostridium clariflavum DSM 19732 Flagellar hook-length control protein FliK YP_005046343.1 2078693 R 720554 CDS YP_005046344.1 374296153 11562179 complement(2080649..2081674) 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolases family 16; beta-glucanase/beta-glucan synthetase 2081674 11562179 Clocl_1811 Clostridium clariflavum DSM 19732 beta-glucanase/beta-glucan synthetase YP_005046344.1 2080649 R 720554 CDS YP_005046345.1 374296154 11562180 complement(2081986..2083050) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 2083050 11562180 Clocl_1812 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005046345.1 2081986 R 720554 CDS YP_005046346.1 374296155 11562181 complement(2083116..2083898) 1 NC_016627.1 PFAM: Ribonuclease HII; ribonuclease HII 2083898 11562181 Clocl_1813 Clostridium clariflavum DSM 19732 ribonuclease HII YP_005046346.1 2083116 R 720554 CDS YP_005046347.1 374296156 11562182 complement(2083882..2084754) 1 NC_016627.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; ribosome biogenesis GTP-binding protein YlqF 2084754 11562182 Clocl_1814 Clostridium clariflavum DSM 19732 ribosome biogenesis GTP-binding protein YlqF YP_005046347.1 2083882 R 720554 CDS YP_005046348.1 374296157 11562183 complement(2084767..2085429) 1 NC_016627.1 PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 2085429 11562183 Clocl_1815 Clostridium clariflavum DSM 19732 signal peptidase I YP_005046348.1 2084767 R 720554 CDS YP_005046349.1 374296158 11562184 complement(2085738..2086082) 1 NC_016627.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 2086082 11562184 Clocl_1816 Clostridium clariflavum DSM 19732 50S ribosomal protein L19 YP_005046349.1 2085738 R 720554 CDS YP_005046350.1 374296159 11562185 complement(2086258..2087319) 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 2087319 11562185 Clocl_1817 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005046350.1 2086258 R 720554 CDS YP_005046351.1 374296160 11562186 complement(2087834..2088817) 1 NC_016627.1 manually curated; hypothetical protein 2088817 11562186 Clocl_1818 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046351.1 2087834 R 720554 CDS YP_005046352.1 374296161 11562187 complement(2089164..2091719) 1 NC_016627.1 PFAM: DnaJ domain; Tetratricopeptide repeat; tetratricopeptide repeat protein,DnaJ-like protein 2091719 11562187 Clocl_1819 Clostridium clariflavum DSM 19732 tetratricopeptide repeat protein,DnaJ-like protein YP_005046352.1 2089164 R 720554 CDS YP_005046353.1 374296162 11562188 complement(2091721..2093421) 1 NC_016627.1 PFAM: Hsp70 protein; molecular chaperone 2093421 11562188 Clocl_1820 Clostridium clariflavum DSM 19732 molecular chaperone YP_005046353.1 2091721 R 720554 CDS YP_005046354.1 374296163 11562189 2094090..2095538 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 2095538 11562189 Clocl_1821 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005046354.1 2094090 D 720554 CDS YP_005046355.1 374296164 11562190 2095668..2096333 1 NC_016627.1 hypothetical protein 2096333 11562190 Clocl_1822 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046355.1 2095668 D 720554 CDS YP_005046356.1 374296165 11562191 2096451..2097239 1 NC_016627.1 hypothetical protein 2097239 11562191 Clocl_1823 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046356.1 2096451 D 720554 CDS YP_005046357.1 374296166 11562192 complement(2097314..2099083) 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; beta-mannanase 2099083 11562192 Clocl_1824 Clostridium clariflavum DSM 19732 beta-mannanase YP_005046357.1 2097314 R 720554 CDS YP_005046358.1 374296167 11562193 complement(2099342..2099860) 1 NC_016627.1 PFAM: RDD family; hypothetical protein 2099860 11562193 Clocl_1825 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046358.1 2099342 R 720554 CDS YP_005046359.1 374296168 11562194 complement(2099878..2101260) 1 NC_016627.1 PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase 2101260 11562194 Clocl_1826 Clostridium clariflavum DSM 19732 parvulin-like peptidyl-prolyl isomerase YP_005046359.1 2099878 R 720554 CDS YP_005046360.1 374296169 11562195 complement(2101416..2102384) 1 NC_016627.1 PFAM: pfkB family carbohydrate kinase; sugar kinase 2102384 11562195 Clocl_1827 Clostridium clariflavum DSM 19732 sugar kinase YP_005046360.1 2101416 R 720554 CDS YP_005046361.1 374296170 11562196 2102822..2103478 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 2103478 11562196 Clocl_1828 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005046361.1 2102822 D 720554 CDS YP_005046362.1 374296171 11562197 complement(2103579..2104757) 1 NC_016627.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; manually curated; chorismate synthase 2104757 11562197 Clocl_1829 Clostridium clariflavum DSM 19732 chorismate synthase YP_005046362.1 2103579 R 720554 CDS YP_005046363.1 374296172 11562198 complement(2104866..2105384) 1 NC_016627.1 PFAM: Shikimate kinase; shikimate kinase 2105384 11562198 Clocl_1830 Clostridium clariflavum DSM 19732 shikimate kinase YP_005046363.1 2104866 R 720554 CDS YP_005046364.1 374296173 11562199 2105623..2106549 1 NC_016627.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; cell envelope-related function transcriptional attenuator common domain-containing protein 2106549 11562199 Clocl_1831 Clostridium clariflavum DSM 19732 cell envelope-related function transcriptional attenuator common domain-containing protein YP_005046364.1 2105623 D 720554 CDS YP_005046365.1 374296174 11562200 complement(2106650..2108104) 1 NC_016627.1 PFAM: Aminopeptidase I zinc metalloprotease (M18); aspartyl aminopeptidase 2108104 11562200 Clocl_1832 Clostridium clariflavum DSM 19732 aspartyl aminopeptidase YP_005046365.1 2106650 R 720554 CDS YP_005046366.1 374296175 11562201 complement(2108363..2109862) 1 NC_016627.1 PFAM: Domain of unknown function (DUF3369); HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; hypothetical protein 2109862 11562201 Clocl_1833 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046366.1 2108363 R 720554 CDS YP_005046367.1 374296176 11562202 2110628..2111428 1 NC_016627.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; HisJ family histidinol phosphate phosphatase 2111428 11562202 Clocl_1834 Clostridium clariflavum DSM 19732 HisJ family histidinol phosphate phosphatase YP_005046367.1 2110628 D 720554 CDS YP_005046368.1 374296177 11562203 complement(2111609..2112838) 1 NC_016627.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 2112838 11562203 Clocl_1835 Clostridium clariflavum DSM 19732 tyrosyl-tRNA synthetase YP_005046368.1 2111609 R 720554 CDS YP_005046369.1 374296178 11562204 complement(2113312..2114391) 1 NC_016627.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2114391 11562204 Clocl_1836 Clostridium clariflavum DSM 19732 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_005046369.1 2113312 R 720554 CDS YP_005046370.1 374296179 11562205 complement(2114434..2114886) 1 NC_016627.1 PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type; FeS cluster assembly scaffold protein NifU 2114886 11562205 Clocl_1837 Clostridium clariflavum DSM 19732 FeS cluster assembly scaffold protein NifU YP_005046370.1 2114434 R 720554 CDS YP_005046371.1 374296180 11562206 complement(2114888..2116069) 1 NC_016627.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase NifS 2116069 11562206 Clocl_1838 Clostridium clariflavum DSM 19732 cysteine desulfurase NifS YP_005046371.1 2114888 R 720554 CDS YP_005046372.1 374296181 11562207 complement(2116184..2116633) 1 NC_016627.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator 2116633 11562207 Clocl_1839 Clostridium clariflavum DSM 19732 rrf2 family protein, putative transcriptional regulator YP_005046372.1 2116184 R 720554 CDS YP_005046373.1 374296182 11562208 complement(2116907..2117194) 1 NC_016627.1 PFAM: Uncharacterised protein family (UPF0180); hypothetical protein 2117194 11562208 Clocl_1840 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046373.1 2116907 R 720554 CDS YP_005046374.1 374296183 11562209 complement(2117315..2117470) 1 NC_016627.1 hypothetical protein 2117470 11562209 Clocl_1841 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046374.1 2117315 R 720554 CDS YP_005046375.1 374296184 11562210 complement(2117508..2118296) 1 NC_016627.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; methylase of chemotaxis methyl-accepting protein 2118296 11562210 Clocl_1842 Clostridium clariflavum DSM 19732 methylase of chemotaxis methyl-accepting protein YP_005046375.1 2117508 R 720554 CDS YP_005046376.1 374296185 11562211 complement(2118398..2118799) 1 NC_016627.1 PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 2118799 11562211 Clocl_1843 Clostridium clariflavum DSM 19732 nucleoside diphosphate kinase YP_005046376.1 2118398 R 720554 CDS YP_005046377.1 374296186 11562212 complement(2119041..2119415) 1 NC_016627.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form; S-adenosylmethionine decarboxylase 2119415 11562212 Clocl_1844 Clostridium clariflavum DSM 19732 S-adenosylmethionine decarboxylase YP_005046377.1 2119041 R 720554 CDS YP_005046378.1 374296187 11562213 complement(2119907..2121961) 1 NC_016627.1 PFAM: S1 RNA binding domain; LytB protein; TIGRFAM: ribosomal protein S1; (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase 2121961 11562213 Clocl_1845 Clostridium clariflavum DSM 19732 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase YP_005046378.1 2119907 R 720554 CDS YP_005046379.1 374296188 11562214 complement(2121962..2122552) 1 NC_016627.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2122552 11562214 Clocl_1846 Clostridium clariflavum DSM 19732 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005046379.1 2121962 R 720554 CDS YP_005046380.1 374296189 11562215 complement(2122546..2123226) 1 NC_016627.1 PFAM: Cytidylate kinase; Shikimate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 2123226 11562215 Clocl_1847 Clostridium clariflavum DSM 19732 cytidylate kinase YP_005046380.1 2122546 R 720554 CDS YP_005046381.1 374296190 11562216 complement(2123302..2123664) 1 NC_016627.1 PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1; monofunctional chorismate mutase, clade 1 2123664 11562216 Clocl_1848 Clostridium clariflavum DSM 19732 monofunctional chorismate mutase, clade 1 YP_005046381.1 2123302 R 720554 CDS YP_005046382.1 374296191 11562217 complement(2123695..2124237) 1 NC_016627.1 PFAM: HutP; HutP protein 2124237 11562217 Clocl_1849 Clostridium clariflavum DSM 19732 HutP protein YP_005046382.1 2123695 R 720554 CDS YP_005046383.1 374296192 11562218 complement(2124404..2124913) 1 NC_016627.1 hypothetical protein 2124913 11562218 Clocl_1850 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046383.1 2124404 R 720554 CDS YP_005046384.1 374296193 11562220 complement(2125636..2126865) 1 NC_016627.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; flavoprotein, HI0933 family 2126865 11562220 Clocl_1852 Clostridium clariflavum DSM 19732 flavoprotein, HI0933 family YP_005046384.1 2125636 R 720554 CDS YP_005046385.1 374296194 11562221 complement(2126979..2127608) 1 NC_016627.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; fructose-2,6-bisphosphatase 2127608 11562221 Clocl_1853 Clostridium clariflavum DSM 19732 fructose-2,6-bisphosphatase YP_005046385.1 2126979 R 720554 CDS YP_005046386.1 374296195 11562222 complement(2127615..2128517) 1 NC_016627.1 PFAM: SIS domain; Helix-turn-helix domain, rpiR family; transcriptional regulator 2128517 11562222 Clocl_1854 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005046386.1 2127615 R 720554 CDS YP_005046387.1 374296196 11562223 complement(2128650..2128817) 1 NC_016627.1 hypothetical protein 2128817 11562223 Clocl_1855 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046387.1 2128650 R 720554 CDS YP_005046388.1 374296197 11562224 complement(2129628..2130290) 1 NC_016627.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; phosphopantetheinyl transferase 2130290 11562224 Clocl_1856 Clostridium clariflavum DSM 19732 phosphopantetheinyl transferase YP_005046388.1 2129628 R 720554 CDS YP_005046389.1 374296198 11562225 complement(2130287..2138512) 1 NC_016627.1 PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; polyketide synthase family protein 2138512 11562225 Clocl_1857 Clostridium clariflavum DSM 19732 polyketide synthase family protein YP_005046389.1 2130287 R 720554 CDS YP_005046390.1 374296199 11562226 complement(2138817..2140319) 1 NC_016627.1 PFAM: AMP-binding enzyme; acyl-CoA synthetase 2140319 11562226 Clocl_1858 Clostridium clariflavum DSM 19732 acyl-CoA synthetase YP_005046390.1 2138817 R 720554 CDS YP_005046391.1 374296200 11562227 complement(2140480..2141520) 1 NC_016627.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2141520 11562227 Clocl_1859 Clostridium clariflavum DSM 19732 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005046391.1 2140480 R 720554 CDS YP_005046392.1 374296201 11562228 complement(2141678..2141920) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 2141920 11562228 Clocl_1860 Clostridium clariflavum DSM 19732 acyl carrier protein YP_005046392.1 2141678 R 720554 CDS YP_005046393.1 374296202 11562229 complement(2141963..2143012) 1 NC_016627.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2143012 11562229 Clocl_1861 Clostridium clariflavum DSM 19732 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005046393.1 2141963 R 720554 CDS YP_005046394.1 374296203 11562230 complement(2143471..2144478) 1 NC_016627.1 PFAM: Dockerin type I repeat; Rare lipoprotein A (RlpA)-like double-psi beta-barrel; manually curated; endoglucanase-like protein 2144478 11562230 Clocl_1862 Clostridium clariflavum DSM 19732 endoglucanase-like protein YP_005046394.1 2143471 R 720554 CDS YP_005046395.1 374296204 11562231 complement(2144632..2147592) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 81; Dockerin type I repeat; putative glycosyl hydrolase 2147592 11562231 Clocl_1863 Clostridium clariflavum DSM 19732 putative glycosyl hydrolase YP_005046395.1 2144632 R 720554 CDS YP_005046396.1 374296205 11562232 complement(2147771..2150638) 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein 2150638 11562232 Clocl_1864 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein,dockerin-like protein YP_005046396.1 2147771 R 720554 CDS YP_005046397.1 374296206 11562233 complement(2151160..2152224) 1 NC_016627.1 PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase 2152224 11562233 Clocl_1865 Clostridium clariflavum DSM 19732 parvulin-like peptidyl-prolyl isomerase YP_005046397.1 2151160 R 720554 CDS YP_005046398.1 374296207 11562234 2152580..2153476 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; putative hydrolase (metallo-beta-lactamase superfamily) 2153476 11562234 Clocl_1866 Clostridium clariflavum DSM 19732 putative hydrolase (metallo-beta-lactamase superfamily) YP_005046398.1 2152580 D 720554 CDS YP_005046399.1 374296208 11562235 complement(2153624..2153824) 1 NC_016627.1 hypothetical protein 2153824 11562235 Clocl_1867 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046399.1 2153624 R 720554 CDS YP_005046400.1 374296209 11562236 2154321..2155019 1 NC_016627.1 PFAM: Protein of unknown function (DUF752); hypothetical protein 2155019 11562236 Clocl_1868 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046400.1 2154321 D 720554 CDS YP_005046401.1 374296210 11562237 complement(2155309..2156958) 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolases family 43; beta-xylosidase 2156958 11562237 Clocl_1869 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005046401.1 2155309 R 720554 CDS YP_005046402.1 374296211 11562238 complement(2157057..2157749) 1 NC_016627.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; putative effector of murein hydrolase 2157749 11562238 Clocl_1870 Clostridium clariflavum DSM 19732 putative effector of murein hydrolase YP_005046402.1 2157057 R 720554 CDS YP_005046403.1 374296212 11562239 complement(2157746..2158105) 1 NC_016627.1 PFAM: LrgA family; putative effector of murein hydrolase LrgA 2158105 11562239 Clocl_1871 Clostridium clariflavum DSM 19732 putative effector of murein hydrolase LrgA YP_005046403.1 2157746 R 720554 CDS YP_005046404.1 374296213 11562240 complement(2158466..2159527) 1 NC_016627.1 PFAM: PPIC-type PPIASE domain; manually curated; parvulin-like peptidyl-prolyl isomerase 2159527 11562240 Clocl_1872 Clostridium clariflavum DSM 19732 parvulin-like peptidyl-prolyl isomerase YP_005046404.1 2158466 R 720554 CDS YP_005046405.1 374296214 11562241 complement(2160091..2161671) 1 NC_016627.1 manually curated; hypothetical protein 2161671 11562241 Clocl_1873 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046405.1 2160091 R 720554 CDS YP_005046406.1 374296215 11562243 complement(2163205..2163486) 1 NC_016627.1 hypothetical protein 2163486 11562243 Clocl_1875 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046406.1 2163205 R 720554 CDS YP_005046407.1 374296216 11562244 complement(2163486..2163902) 1 NC_016627.1 hypothetical protein 2163902 11562244 Clocl_1876 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046407.1 2163486 R 720554 CDS YP_005046408.1 374296217 11562245 complement(2163916..2164434) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2164434 11562245 Clocl_1877 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005046408.1 2163916 R 720554 CDS YP_005046409.1 374296218 11562246 complement(2164532..2165473) 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; lysophospholipase 2165473 11562246 Clocl_1878 Clostridium clariflavum DSM 19732 lysophospholipase YP_005046409.1 2164532 R 720554 CDS YP_005046410.1 374296219 11562247 complement(2165488..2166264) 1 NC_016627.1 hypothetical protein 2166264 11562247 Clocl_1879 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046410.1 2165488 R 720554 CDS YP_005046411.1 374296220 11562248 complement(2166266..2167180) 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 2167180 11562248 Clocl_1880 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005046411.1 2166266 R 720554 CDS YP_005046412.1 374296221 11562249 complement(2167173..2167385) 1 NC_016627.1 hypothetical protein 2167385 11562249 Clocl_1881 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046412.1 2167173 R 720554 CDS YP_005046413.1 374296222 11562250 complement(2167964..2168695) 1 NC_016627.1 hypothetical protein 2168695 11562250 Clocl_1882 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046413.1 2167964 R 720554 CDS YP_005046414.1 374296223 11562251 complement(2168692..2169252) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2169252 11562251 Clocl_1883 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005046414.1 2168692 R 720554 CDS YP_005046415.1 374296224 11562254 2170673..2170906 1 NC_016627.1 hypothetical protein 2170906 11562254 Clocl_1886 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046415.1 2170673 D 720554 CDS YP_005046416.1 374296225 11562255 complement(2171014..2172945) 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase 2172945 11562255 Clocl_1887 Clostridium clariflavum DSM 19732 NADH:flavin oxidoreductase YP_005046416.1 2171014 R 720554 CDS YP_005046417.1 374296226 11562256 complement(2173202..2175142) 1 NC_016627.1 PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; putative oligopeptide transporter, OPT family 2175142 11562256 Clocl_1888 Clostridium clariflavum DSM 19732 putative oligopeptide transporter, OPT family YP_005046417.1 2173202 R 720554 CDS YP_005046418.1 374296227 11562257 complement(2175161..2176591) 1 NC_016627.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 2176591 11562257 Clocl_1889 Clostridium clariflavum DSM 19732 aminoacyl-histidine dipeptidase YP_005046418.1 2175161 R 720554 CDS YP_005046419.1 374296228 11562258 complement(2176873..2177703) 1 NC_016627.1 PFAM: Trypsin; trypsin-like serine protease with C-terminal PDZ domain 2177703 11562258 Clocl_1890 Clostridium clariflavum DSM 19732 trypsin-like serine protease with C-terminal PDZ domain YP_005046419.1 2176873 R 720554 CDS YP_005046420.1 374296229 11562259 complement(2177896..2178624) 1 NC_016627.1 PFAM: Protein of unknown function (DUF554); membrane protein 2178624 11562259 Clocl_1891 Clostridium clariflavum DSM 19732 membrane protein YP_005046420.1 2177896 R 720554 CDS YP_005046421.1 374296230 11562260 complement(2178858..2180306) 1 NC_016627.1 PFAM: Beta-eliminating lyase; tryptophanase 2180306 11562260 Clocl_1892 Clostridium clariflavum DSM 19732 tryptophanase YP_005046421.1 2178858 R 720554 CDS YP_005046422.1 374296231 11562261 complement(2180722..2181720) 1 NC_016627.1 PFAM: Dockerin type I repeat; GDSL-like Lipase/Acylhydrolase; lysophospholipase L1-like esterase 2181720 11562261 Clocl_1893 Clostridium clariflavum DSM 19732 lysophospholipase L1-like esterase YP_005046422.1 2180722 R 720554 CDS YP_005046423.1 374296232 11562262 complement(2181863..2182597) 1 NC_016627.1 hypothetical protein 2182597 11562262 Clocl_1894 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046423.1 2181863 R 720554 CDS YP_005046424.1 374296233 11562263 2182826..2183224 1 NC_016627.1 PFAM: Penicillinase repressor; putative transcriptional regulator 2183224 11562263 Clocl_1895 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005046424.1 2182826 D 720554 CDS YP_005046425.1 374296234 11562264 2183217..2186084 1 NC_016627.1 PFAM: BlaR1 peptidase M56; manually curated; antirepressor regulating drug resistance protein 2186084 11562264 Clocl_1896 Clostridium clariflavum DSM 19732 antirepressor regulating drug resistance protein YP_005046425.1 2183217 D 720554 CDS YP_005046426.1 374296235 11562265 2186056..2186634 1 NC_016627.1 hypothetical protein 2186634 11562265 Clocl_1897 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046426.1 2186056 D 720554 CDS YP_005046427.1 374296236 11562266 complement(2186798..2187862) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; spermidine/putrescine-binding periplasmic protein 2187862 11562266 Clocl_1898 Clostridium clariflavum DSM 19732 spermidine/putrescine-binding periplasmic protein YP_005046427.1 2186798 R 720554 CDS YP_005046428.1 374296237 11562267 complement(2187859..2188653) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type spermidine/putrescine transport system, permease component II 2188653 11562267 Clocl_1899 Clostridium clariflavum DSM 19732 ABC-type spermidine/putrescine transport system, permease component II YP_005046428.1 2187859 R 720554 CDS YP_005046429.1 374296238 11562268 complement(2188647..2189474) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type spermidine/putrescine transport system, permease component I 2189474 11562268 Clocl_1900 Clostridium clariflavum DSM 19732 ABC-type spermidine/putrescine transport system, permease component I YP_005046429.1 2188647 R 720554 CDS YP_005046430.1 374296239 11562269 complement(2189471..2190529) 1 NC_016627.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; spermidine/putrescine ABC transporter ATP-binding subunit 2190529 11562269 Clocl_1901 Clostridium clariflavum DSM 19732 spermidine/putrescine ABC transporter ATP-binding subunit YP_005046430.1 2189471 R 720554 CDS YP_005046431.1 374296240 11562270 complement(2190539..2191078) 1 NC_016627.1 PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator with cupin domain 2191078 11562270 Clocl_1902 Clostridium clariflavum DSM 19732 putative transcriptional regulator with cupin domain YP_005046431.1 2190539 R 720554 CDS YP_005046432.1 374296241 11562271 complement(2191529..2195884) 1 NC_016627.1 PFAM: DNA polymerase III polC-type N-terminus; Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha chain, Gram-positive type; DNA polymerase III subunit alpha 2195884 11562271 Clocl_1903 Clostridium clariflavum DSM 19732 DNA polymerase III subunit alpha YP_005046432.1 2191529 R 720554 CDS YP_005046433.1 374296242 11562273 complement(2197701..2198924) 1 NC_016627.1 hypothetical protein 2198924 11562273 Clocl_1905 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046433.1 2197701 R 720554 CDS YP_005046434.1 374296243 11562276 complement(2200267..2201787) 1 NC_016627.1 PFAM: Phage integrase family; site-specific recombinase XerD 2201787 11562276 Clocl_1908 Clostridium clariflavum DSM 19732 site-specific recombinase XerD YP_005046434.1 2200267 R 720554 CDS YP_005046435.1 374296244 11562277 complement(2201898..2202107) 1 NC_016627.1 TIGRFAM: DNA binding domain, excisionase family; hypothetical protein 2202107 11562277 Clocl_1909 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046435.1 2201898 R 720554 CDS YP_005046436.1 374296245 11562278 2202161..2203276 1 NC_016627.1 PFAM: DNA methylase; DNA modification methylase 2203276 11562278 Clocl_1910 Clostridium clariflavum DSM 19732 DNA modification methylase YP_005046436.1 2202161 D 720554 CDS YP_005046437.1 374296246 11562328 complement(2203447..2203827) 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 2203827 11562328 Clocl_1911 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005046437.1 2203447 R 720554 CDS YP_005046438.1 374296247 11562329 complement(2204669..2207644) 1 NC_016627.1 PFAM: Type III restriction enzyme, res subunit; restriction endonuclease 2207644 11562329 Clocl_1912 Clostridium clariflavum DSM 19732 restriction endonuclease YP_005046438.1 2204669 R 720554 CDS YP_005046439.1 374296248 11562330 complement(2207661..2209544) 1 NC_016627.1 PFAM: DNA methylase; adenine specific DNA methylase Mod 2209544 11562330 Clocl_1913 Clostridium clariflavum DSM 19732 adenine specific DNA methylase Mod YP_005046439.1 2207661 R 720554 CDS YP_005046440.1 374296249 11562331 complement(2209541..2210266) 1 NC_016627.1 hypothetical protein 2210266 11562331 Clocl_1914 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046440.1 2209541 R 720554 CDS YP_005046441.1 374296250 11562332 complement(2210278..2213547) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; DNA/RNA helicase 2213547 11562332 Clocl_1915 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005046441.1 2210278 R 720554 CDS YP_005046442.1 374296251 11562333 complement(2213552..2213767) 1 NC_016627.1 hypothetical protein 2213767 11562333 Clocl_1916 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046442.1 2213552 R 720554 CDS YP_005046443.1 374296252 11562334 2214208..2214804 1 NC_016627.1 PFAM: Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 2214804 11562334 Clocl_1917 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005046443.1 2214208 D 720554 CDS YP_005046444.1 374296253 11562335 2214841..2215296 1 NC_016627.1 hypothetical protein 2215296 11562335 Clocl_1918 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046444.1 2214841 D 720554 CDS YP_005046445.1 374296254 11562336 2215300..2215743 1 NC_016627.1 hypothetical protein 2215743 11562336 Clocl_1919 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046445.1 2215300 D 720554 CDS YP_005046446.1 374296255 11562337 complement(2215921..2216166) 1 NC_016627.1 hypothetical protein 2216166 11562337 Clocl_1920 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046446.1 2215921 R 720554 CDS YP_005046447.1 374296256 11562338 complement(2216576..2217205) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2217205 11562338 Clocl_1921 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005046447.1 2216576 R 720554 CDS YP_005046448.1 374296257 11562339 complement(2217470..2218369) 1 NC_016627.1 PFAM: Integrase core domain; transposase 2218369 11562339 Clocl_1922 Clostridium clariflavum DSM 19732 transposase YP_005046448.1 2217470 R 720554 CDS YP_005046449.1 374296258 11562340 complement(2218329..2218622) 1 NC_016627.1 PFAM: Transposase; transposase 2218622 11562340 Clocl_1923 Clostridium clariflavum DSM 19732 transposase YP_005046449.1 2218329 R 720554 CDS YP_005046450.1 374296259 11562341 2218748..2219086 1 NC_016627.1 hypothetical protein 2219086 11562341 Clocl_1924 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046450.1 2218748 D 720554 CDS YP_005046451.1 374296260 11562342 2219286..2219438 1 NC_016627.1 hypothetical protein 2219438 11562342 Clocl_1925 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046451.1 2219286 D 720554 CDS YP_005046452.1 374296261 11562343 2219587..2220711 1 NC_016627.1 PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta 2220711 11562343 Clocl_1926 Clostridium clariflavum DSM 19732 sodium ion-translocating decarboxylase subunit beta YP_005046452.1 2219587 D 720554 CDS YP_005046453.1 374296262 11562344 2220725..2220871 1 NC_016627.1 PFAM: Oxaloacetate decarboxylase, gamma chain; Oxaloacetate decarboxylase, gamma chain 2220871 11562344 Clocl_1927 Clostridium clariflavum DSM 19732 Oxaloacetate decarboxylase, gamma chain YP_005046453.1 2220725 D 720554 CDS YP_005046454.1 374296263 11562345 2221182..2221817 1 NC_016627.1 PFAM: Exonuclease; manually curated; inhibitor of the KinA pathway to sporulation, predicted exonuclease 2221817 11562345 Clocl_1928 Clostridium clariflavum DSM 19732 inhibitor of the KinA pathway to sporulation, predicted exonuclease YP_005046454.1 2221182 D 720554 CDS YP_005046455.1 374296264 11562346 complement(2221911..2222645) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase 1-activating enzyme 2222645 11562346 Clocl_1929 Clostridium clariflavum DSM 19732 pyruvate formate-lyase 1-activating enzyme YP_005046455.1 2221911 R 720554 CDS YP_005046456.1 374296265 11562347 complement(2222664..2224892) 1 NC_016627.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 2224892 11562347 Clocl_1930 Clostridium clariflavum DSM 19732 formate acetyltransferase 1 YP_005046456.1 2222664 R 720554 CDS YP_005046457.1 374296266 11562348 complement(2225098..2225952) 1 NC_016627.1 hypothetical protein 2225952 11562348 Clocl_1931 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046457.1 2225098 R 720554 CDS YP_005046458.1 374296267 11562349 complement(2226183..2226437) 1 NC_016627.1 hypothetical protein 2226437 11562349 Clocl_1932 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046458.1 2226183 R 720554 CDS YP_005046459.1 374296268 11562350 complement(2226492..2227091) 1 NC_016627.1 hypothetical protein 2227091 11562350 Clocl_1933 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046459.1 2226492 R 720554 CDS YP_005046460.1 374296269 11562351 complement(2227129..2227437) 1 NC_016627.1 manually curated; hypothetical protein 2227437 11562351 Clocl_1934 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046460.1 2227129 R 720554 CDS YP_005046461.1 374296270 11562352 complement(2227513..2229138) 1 NC_016627.1 PFAM: Protein of unknown function (DUF342); manually curated; putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon 2229138 11562352 Clocl_1935 Clostridium clariflavum DSM 19732 putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon YP_005046461.1 2227513 R 720554 CDS YP_005046462.1 374296271 11562353 complement(2229285..2230055) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 2230055 11562353 Clocl_1936 Clostridium clariflavum DSM 19732 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG YP_005046462.1 2229285 R 720554 CDS YP_005046463.1 374296272 11562354 complement(2230198..2230605) 1 NC_016627.1 hypothetical protein 2230605 11562354 Clocl_1937 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046463.1 2230198 R 720554 CDS YP_005046464.1 374296273 11562355 complement(2230771..2231256) 1 NC_016627.1 PFAM: CheD; chemotaxis protein 2231256 11562355 Clocl_1938 Clostridium clariflavum DSM 19732 chemotaxis protein YP_005046464.1 2230771 R 720554 CDS YP_005046465.1 374296274 11562356 complement(2231256..2231909) 1 NC_016627.1 PFAM: CheC-like family; chemotaxis protein CheC, inhibitor of MCP methylation 2231909 11562356 Clocl_1939 Clostridium clariflavum DSM 19732 chemotaxis protein CheC, inhibitor of MCP methylation YP_005046465.1 2231256 R 720554 CDS YP_005046466.1 374296275 11562357 complement(2231936..2232382) 1 NC_016627.1 PFAM: CheW-like domain; chemotaxis signal transduction protein 2232382 11562357 Clocl_1940 Clostridium clariflavum DSM 19732 chemotaxis signal transduction protein YP_005046466.1 2231936 R 720554 CDS YP_005046467.1 374296276 11562358 complement(2232409..2234484) 1 NC_016627.1 PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; chemotaxis protein histidine kinase-like protein 2234484 11562358 Clocl_1941 Clostridium clariflavum DSM 19732 chemotaxis protein histidine kinase-like protein YP_005046467.1 2232409 R 720554 CDS YP_005046468.1 374296277 11562359 complement(2234475..2235548) 1 NC_016627.1 PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 2235548 11562359 Clocl_1942 Clostridium clariflavum DSM 19732 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_005046468.1 2234475 R 720554 CDS YP_005046469.1 374296278 11562360 complement(2235558..2236223) 1 NC_016627.1 PFAM: PilZ domain; putative glycosyltransferase 2236223 11562360 Clocl_1943 Clostridium clariflavum DSM 19732 putative glycosyltransferase YP_005046469.1 2235558 R 720554 CDS YP_005046470.1 374296279 11562361 complement(2236274..2237185) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase 2237185 11562361 Clocl_1944 Clostridium clariflavum DSM 19732 chromosome partitioning ATPase YP_005046470.1 2236274 R 720554 CDS YP_005046471.1 374296280 11562362 complement(2237185..2238369) 1 NC_016627.1 PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF; flagellar biosynthetic protein FlhF 2238369 11562362 Clocl_1945 Clostridium clariflavum DSM 19732 flagellar biosynthetic protein FlhF YP_005046471.1 2237185 R 720554 CDS YP_005046472.1 374296281 11562363 complement(2238371..2240395) 1 NC_016627.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 2240395 11562363 Clocl_1946 Clostridium clariflavum DSM 19732 flagellar biosynthesis protein FlhA YP_005046472.1 2238371 R 720554 CDS YP_005046473.1 374296282 11562364 complement(2240501..2241700) 1 NC_016627.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: type III secretion protein, YscU/HrpY family; flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 2241700 11562364 Clocl_1947 Clostridium clariflavum DSM 19732 flagellar biosynthetic protein FlhB YP_005046473.1 2240501 R 720554 CDS YP_005046474.1 374296283 11562365 complement(2241697..2242482) 1 NC_016627.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 2242482 11562365 Clocl_1948 Clostridium clariflavum DSM 19732 flagellar biosynthetic protein FliR YP_005046474.1 2241697 R 720554 CDS YP_005046475.1 374296284 11562366 complement(2242510..2242779) 1 NC_016627.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 2242779 11562366 Clocl_1949 Clostridium clariflavum DSM 19732 flagellar biosynthetic protein FliQ YP_005046475.1 2242510 R 720554 CDS YP_005046476.1 374296285 11562367 complement(2242822..2243628) 1 NC_016627.1 PFAM: FliP family; TIGRFAM: type III secretion apparatus protein, YscR/HrcR family; flagellar biosynthetic protein FliP; flagellar biosynthetic protein FliP 2243628 11562367 Clocl_1950 Clostridium clariflavum DSM 19732 flagellar biosynthetic protein FliP YP_005046476.1 2242822 R 720554 CDS YP_005046477.1 374296286 11562368 complement(2243585..2244091) 1 NC_016627.1 PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO; flagellar biogenesis protein 2244091 11562368 Clocl_1951 Clostridium clariflavum DSM 19732 flagellar biogenesis protein YP_005046477.1 2243585 R 720554 CDS YP_005046478.1 374296287 11562369 complement(2244176..2244538) 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains 2244538 11562369 Clocl_1952 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005046478.1 2244176 R 720554 CDS YP_005046479.1 374296288 11562370 complement(2244618..2245787) 1 NC_016627.1 PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN; manually curated; flagellar motor switch protein FliN 2245787 11562370 Clocl_1953 Clostridium clariflavum DSM 19732 flagellar motor switch protein FliN YP_005046479.1 2244618 R 720554 CDS YP_005046480.1 374296289 11562371 complement(2245789..2246778) 1 NC_016627.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; manually curated; flagellar motor switch protein FliM 2246778 11562371 Clocl_1954 Clostridium clariflavum DSM 19732 flagellar motor switch protein FliM YP_005046480.1 2245789 R 720554 CDS YP_005046481.1 374296290 11562372 complement(2246791..2247297) 1 NC_016627.1 PFAM: Flagellar basal body-associated protein FliL; flagellar basal body-associated protein 2247297 11562372 Clocl_1955 Clostridium clariflavum DSM 19732 flagellar basal body-associated protein YP_005046481.1 2246791 R 720554 CDS YP_005046482.1 374296291 11562373 complement(2247613..2247813) 1 NC_016627.1 PFAM: Flagellar protein (FlbD); motility protein 2247813 11562373 Clocl_1956 Clostridium clariflavum DSM 19732 motility protein YP_005046482.1 2247613 R 720554 CDS YP_005046483.1 374296292 11562374 complement(2248167..2249486) 1 NC_016627.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins; flagellar hook-basal body protein 2249486 11562374 Clocl_1957 Clostridium clariflavum DSM 19732 flagellar hook-basal body protein YP_005046483.1 2248167 R 720554 CDS YP_005046484.1 374296293 11562375 complement(2249599..2249991) 1 NC_016627.1 PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein; flagellar operon protein 2249991 11562375 Clocl_1958 Clostridium clariflavum DSM 19732 flagellar operon protein YP_005046484.1 2249599 R 720554 CDS YP_005046485.1 374296294 11562376 complement(2250025..2250918) 1 NC_016627.1 PFAM: Flagellar hook capping protein; flagellar hook capping protein 2250918 11562376 Clocl_1959 Clostridium clariflavum DSM 19732 flagellar hook capping protein YP_005046485.1 2250025 R 720554 CDS YP_005046486.1 374296295 11562377 complement(2250970..2252538) 1 NC_016627.1 PFAM: Flagellar hook-length control protein FliK; flagellar hook-length control protein 2252538 11562377 Clocl_1960 Clostridium clariflavum DSM 19732 flagellar hook-length control protein YP_005046486.1 2250970 R 720554 CDS YP_005046487.1 374296296 11562378 2252954..2254243 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 2254243 11562378 Clocl_1961 Clostridium clariflavum DSM 19732 transposase YP_005046487.1 2252954 D 720554 CDS YP_005046488.1 374296297 11562379 complement(2254467..2255183) 1 NC_016627.1 manually curated; hypothetical protein 2255183 11562379 Clocl_1962 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046488.1 2254467 R 720554 CDS YP_005046489.1 374296298 11562380 complement(2255415..2255858) 1 NC_016627.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ; flagellar export protein FliJ 2255858 11562380 Clocl_1963 Clostridium clariflavum DSM 19732 flagellar export protein FliJ YP_005046489.1 2255415 R 720554 CDS YP_005046490.1 374296299 11562381 complement(2255947..2257266) 1 NC_016627.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; flagellar protein export ATPase FliI; type III secretion system ATPase, FliI/YscN 2257266 11562381 Clocl_1964 Clostridium clariflavum DSM 19732 type III secretion system ATPase, FliI/YscN YP_005046490.1 2255947 R 720554 CDS YP_005046491.1 374296300 11562382 complement(2257442..2258242) 1 NC_016627.1 PFAM: Flagellar assembly protein FliH; flagellar biosynthesis/type III secretory pathway protein 2258242 11562382 Clocl_1965 Clostridium clariflavum DSM 19732 flagellar biosynthesis/type III secretory pathway protein YP_005046491.1 2257442 R 720554 CDS YP_005046492.1 374296301 11562383 complement(2258235..2259260) 1 NC_016627.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 2259260 11562383 Clocl_1966 Clostridium clariflavum DSM 19732 flagellar motor switch protein FliG YP_005046492.1 2258235 R 720554 CDS YP_005046493.1 374296302 11562384 complement(2259299..2260867) 1 NC_016627.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF); flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF 2260867 11562384 Clocl_1967 Clostridium clariflavum DSM 19732 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF YP_005046493.1 2259299 R 720554 CDS YP_005046494.1 374296303 11562385 complement(2260965..2261273) 1 NC_016627.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex protein FliE 2261273 11562385 Clocl_1968 Clostridium clariflavum DSM 19732 flagellar hook-basal body complex protein FliE YP_005046494.1 2260965 R 720554 CDS YP_005046495.1 374296304 11562386 complement(2261321..2261761) 1 NC_016627.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 2261761 11562386 Clocl_1969 Clostridium clariflavum DSM 19732 flagellar basal-body rod protein FlgC YP_005046495.1 2261321 R 720554 CDS YP_005046496.1 374296305 11562387 complement(2261768..2262256) 1 NC_016627.1 TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 2262256 11562387 Clocl_1970 Clostridium clariflavum DSM 19732 flagellar basal-body rod protein FlgB YP_005046496.1 2261768 R 720554 CDS YP_005046497.1 374296306 11562388 complement(2263040..2264350) 1 NC_016627.1 PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase; tRNA:m(5)U-54 methyltransferase 2264350 11562388 Clocl_1971 Clostridium clariflavum DSM 19732 tRNA:m(5)U-54 methyltransferase YP_005046497.1 2263040 R 720554 CDS YP_005046498.1 374296307 11562389 complement(2264369..2266465) 1 NC_016627.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I, bacterial 2266465 11562389 Clocl_1972 Clostridium clariflavum DSM 19732 DNA topoisomerase I, bacterial YP_005046498.1 2264369 R 720554 CDS YP_005046499.1 374296308 11562390 complement(2266731..2267840) 1 NC_016627.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; manually curated; DNA protecting protein DprA 2267840 11562390 Clocl_1973 Clostridium clariflavum DSM 19732 DNA protecting protein DprA YP_005046499.1 2266731 R 720554 CDS YP_005046500.1 374296309 11562391 2268195..2269721 1 NC_016627.1 PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; Mg chelatase-like protein 2269721 11562391 Clocl_1974 Clostridium clariflavum DSM 19732 Mg chelatase-like protein YP_005046500.1 2268195 D 720554 CDS YP_005046501.1 374296310 11562392 complement(2269782..2271458) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; dockerin-like protein 2271458 11562392 Clocl_1975 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046501.1 2269782 R 720554 CDS YP_005046502.1 374296311 11562393 2271856..2272248 1 NC_016627.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; cytidine deaminase 2272248 11562393 Clocl_1976 Clostridium clariflavum DSM 19732 cytidine deaminase YP_005046502.1 2271856 D 720554 CDS YP_005046503.1 374296312 11562394 2272597..2272923 1 NC_016627.1 hypothetical protein 2272923 11562394 Clocl_1977 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046503.1 2272597 D 720554 CDS YP_005046504.1 374296313 11562395 complement(2273076..2274050) 1 NC_016627.1 PFAM: Cohesin domain; Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2274050 11562395 Clocl_1978 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005046504.1 2273076 R 720554 CDS YP_005046505.1 374296314 11562396 complement(2274223..2274945) 1 NC_016627.1 PFAM: Thioesterase domain; putative thioesterase involved in non-ribosomal peptide biosynthesis 2274945 11562396 Clocl_1979 Clostridium clariflavum DSM 19732 putative thioesterase involved in non-ribosomal peptide biosynthesis YP_005046505.1 2274223 R 720554 CDS YP_005046506.1 374296315 11562397 complement(2274958..2276880) 1 NC_016627.1 PFAM: Sulfatase; phosphoglycerol transferase family protein, alkaline phosphatase superfamily 2276880 11562397 Clocl_1980 Clostridium clariflavum DSM 19732 phosphoglycerol transferase family protein, alkaline phosphatase superfamily YP_005046506.1 2274958 R 720554 CDS YP_005046507.1 374296316 11562398 2277589..2279274 1 NC_016627.1 PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; endoglucanase 2279274 11562398 Clocl_1981 Clostridium clariflavum DSM 19732 endoglucanase YP_005046507.1 2277589 D 720554 CDS YP_005046508.1 374296317 11562399 complement(2279336..2279830) 1 NC_016627.1 hypothetical protein 2279830 11562399 Clocl_1982 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046508.1 2279336 R 720554 CDS YP_005046509.1 374296318 11562400 complement(2279935..2280192) 1 NC_016627.1 hypothetical protein 2280192 11562400 Clocl_1983 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046509.1 2279935 R 720554 CDS YP_005046510.1 374296319 11562402 complement(2281100..2282716) 1 NC_016627.1 PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; NhaP-type Na+(K+)/H+ antiporter 2282716 11562402 Clocl_1985 Clostridium clariflavum DSM 19732 NhaP-type Na+(K+)/H+ antiporter YP_005046510.1 2281100 R 720554 CDS YP_005046511.1 374296320 11562405 complement(2283553..2284347) 1 NC_016627.1 hypothetical protein 2284347 11562405 Clocl_1988 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046511.1 2283553 R 720554 CDS YP_005046512.1 374296321 11562406 complement(2284526..2285170) 1 NC_016627.1 hypothetical protein 2285170 11562406 Clocl_1989 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046512.1 2284526 R 720554 CDS YP_005046513.1 374296322 11562407 complement(2285288..2285893) 1 NC_016627.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1; fructose-2,6-bisphosphatase 2285893 11562407 Clocl_1990 Clostridium clariflavum DSM 19732 fructose-2,6-bisphosphatase YP_005046513.1 2285288 R 720554 CDS YP_005046514.1 374296323 11562408 complement(2285970..2286740) 1 NC_016627.1 hypothetical protein 2286740 11562408 Clocl_1991 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046514.1 2285970 R 720554 CDS YP_005046515.1 374296324 11562409 complement(2286818..2287009) 1 NC_016627.1 hypothetical protein 2287009 11562409 Clocl_1992 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046515.1 2286818 R 720554 CDS YP_005046516.1 374296325 11562410 complement(2287353..2287835) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1877); hypothetical protein 2287835 11562410 Clocl_1993 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046516.1 2287353 R 720554 CDS YP_005046517.1 374296326 11562411 complement(2287897..2288025) 1 NC_016627.1 hypothetical protein 2288025 11562411 Clocl_1994 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046517.1 2287897 R 720554 CDS YP_005046518.1 374296327 11562412 complement(2287997..2288248) 1 NC_016627.1 hypothetical protein 2288248 11562412 Clocl_1995 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046518.1 2287997 R 720554 CDS YP_005046519.1 374296328 11562413 complement(2288383..2289237) 1 NC_016627.1 hypothetical protein 2289237 11562413 Clocl_1996 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046519.1 2288383 R 720554 CDS YP_005046520.1 374296329 11562414 complement(2289307..2289627) 1 NC_016627.1 hypothetical protein 2289627 11562414 Clocl_1997 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046520.1 2289307 R 720554 CDS YP_005046521.1 374296330 11562415 complement(2289933..2290616) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 2290616 11562415 Clocl_1998 Clostridium clariflavum DSM 19732 anaerobic ribonucleoside-triphosphate reductase activating protein YP_005046521.1 2289933 R 720554 CDS YP_005046522.1 374296331 11562416 complement(2290613..2292703) 1 NC_016627.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase class III catalytic subunit 2292703 11562416 Clocl_1999 Clostridium clariflavum DSM 19732 ribonucleoside-triphosphate reductase class III catalytic subunit YP_005046522.1 2290613 R 720554 CDS YP_005046523.1 374296332 11562417 complement(2293571..2293696) 1 NC_016627.1 hypothetical protein 2293696 11562417 Clocl_2000 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046523.1 2293571 R 720554 CDS YP_005046524.1 374296333 11562418 complement(2293969..2294721) 1 NC_016627.1 hypothetical protein 2294721 11562418 Clocl_2001 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046524.1 2293969 R 720554 CDS YP_005046525.1 374296334 11562419 complement(2294765..2295205) 1 NC_016627.1 hypothetical protein 2295205 11562419 Clocl_2002 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046525.1 2294765 R 720554 CDS YP_005046526.1 374296335 11562420 complement(2295567..2295752) 1 NC_016627.1 hypothetical protein 2295752 11562420 Clocl_2003 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046526.1 2295567 R 720554 CDS YP_005046527.1 374296336 11562421 complement(2295844..2298252) 1 NC_016627.1 PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain; Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme 2298252 11562421 Clocl_2004 Clostridium clariflavum DSM 19732 Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme YP_005046527.1 2295844 R 720554 CDS YP_005046528.1 374296337 11562422 complement(2298253..2298888) 1 NC_016627.1 PFAM: Vitamin B12 dependent methionine synthase, activation domain; vitamin B12 dependent methionine synthase 2298888 11562422 Clocl_2005 Clostridium clariflavum DSM 19732 vitamin B12 dependent methionine synthase YP_005046528.1 2298253 R 720554 CDS YP_005046529.1 374296338 11562423 2299165..2299350 1 NC_016627.1 hypothetical protein 2299350 11562423 Clocl_2006 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046529.1 2299165 D 720554 CDS YP_005046530.1 374296339 11562424 2299364..2299612 1 NC_016627.1 PFAM: Coat F domain; coat F domain-containing protein 2299612 11562424 Clocl_2007 Clostridium clariflavum DSM 19732 coat F domain-containing protein YP_005046530.1 2299364 D 720554 CDS YP_005046531.1 374296340 11562425 complement(2299785..2299961) 1 NC_016627.1 hypothetical protein 2299961 11562425 Clocl_2008 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046531.1 2299785 R 720554 CDS YP_005046532.1 374296341 11562426 complement(2299979..2300620) 1 NC_016627.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family; sporulation protein, yteA family 2300620 11562426 Clocl_2009 Clostridium clariflavum DSM 19732 sporulation protein, yteA family YP_005046532.1 2299979 R 720554 CDS YP_005046533.1 374296342 11562427 2300820..2301602 1 NC_016627.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; methylthioadenosine phosphorylase 2301602 11562427 Clocl_2010 Clostridium clariflavum DSM 19732 methylthioadenosine phosphorylase YP_005046533.1 2300820 D 720554 CDS YP_005046534.1 374296343 11562428 2301662..2302696 1 NC_016627.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; methylthioribose-1-phosphate isomerase 2302696 11562428 Clocl_2011 Clostridium clariflavum DSM 19732 methylthioribose-1-phosphate isomerase YP_005046534.1 2301662 D 720554 CDS YP_005046535.1 374296344 11562429 complement(2302849..2303931) 1 NC_016627.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2303931 11562429 Clocl_2012 Clostridium clariflavum DSM 19732 3-dehydroquinate synthase YP_005046535.1 2302849 R 720554 CDS YP_005046536.1 374296345 11562430 complement(2303941..2304447) 1 NC_016627.1 PFAM: DivIVA protein; TIGRFAM: DivIVA domain; DivIVA domain-containing protein 2304447 11562430 Clocl_2013 Clostridium clariflavum DSM 19732 DivIVA domain-containing protein YP_005046536.1 2303941 R 720554 CDS YP_005046537.1 374296346 11562431 complement(2304463..2305254) 1 NC_016627.1 PFAM: S4 domain; hypothetical protein 2305254 11562431 Clocl_2014 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046537.1 2304463 R 720554 CDS YP_005046538.1 374296347 11562432 complement(2305324..2305605) 1 NC_016627.1 PFAM: YGGT family; hypothetical protein 2305605 11562432 Clocl_2015 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046538.1 2305324 R 720554 CDS YP_005046539.1 374296348 11562433 complement(2305618..2306076) 1 NC_016627.1 PFAM: Protein of unknown function (DUF552); manually curated; hypothetical protein 2306076 11562433 Clocl_2016 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046539.1 2305618 R 720554 CDS YP_005046540.1 374296349 11562434 complement(2306113..2306820) 1 NC_016627.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; pyridoxal phosphate enzyme, YggS family 2306820 11562434 Clocl_2017 Clostridium clariflavum DSM 19732 pyridoxal phosphate enzyme, YggS family YP_005046540.1 2306113 R 720554 CDS YP_005046541.1 374296350 11562435 complement(2306820..2308109) 1 NC_016627.1 TIGRFAM: putative membrane fusion protein; hypothetical protein 2308109 11562435 Clocl_2018 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046541.1 2306820 R 720554 CDS YP_005046542.1 374296351 11562436 complement(2308175..2309461) 1 NC_016627.1 PFAM: Aluminium resistance protein; cystathionine beta-lyase family protein involved in aluminum resistance 2309461 11562436 Clocl_2019 Clostridium clariflavum DSM 19732 cystathionine beta-lyase family protein involved in aluminum resistance YP_005046542.1 2308175 R 720554 CDS YP_005046543.1 374296352 11562437 complement(2309685..2311397) 1 NC_016627.1 PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain; glycosidase 2311397 11562437 Clocl_2020 Clostridium clariflavum DSM 19732 glycosidase YP_005046543.1 2309685 R 720554 CDS YP_005046544.1 374296353 11562438 2311609..2312622 1 NC_016627.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase 2312622 11562438 Clocl_2021 Clostridium clariflavum DSM 19732 RluA family pseudouridine synthase YP_005046544.1 2311609 D 720554 CDS YP_005046545.1 374296354 11562439 2312766..2313347 1 NC_016627.1 PFAM: MerR family regulatory protein; putative transcriptional regulator 2313347 11562439 Clocl_2022 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005046545.1 2312766 D 720554 CDS YP_005046546.1 374296355 11562440 complement(2313574..2314200) 1 NC_016627.1 hypothetical protein 2314200 11562440 Clocl_2023 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046546.1 2313574 R 720554 CDS YP_005046547.1 374296356 11562442 complement(2315416..2315802) 1 NC_016627.1 PFAM: Penicillinase repressor; putative transcriptional regulator 2315802 11562442 Clocl_2025 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005046547.1 2315416 R 720554 CDS YP_005046548.1 374296357 11562443 complement(2316175..2316570) 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2316570 11562443 Clocl_2026 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005046548.1 2316175 R 720554 CDS YP_005046549.1 374296358 11562444 complement(2316572..2319640) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS domain S-box 2319640 11562444 Clocl_2027 Clostridium clariflavum DSM 19732 PAS domain S-box YP_005046549.1 2316572 R 720554 CDS YP_005046550.1 374296359 11562445 complement(2319663..2320703) 1 NC_016627.1 PFAM: CheB methylesterase; Response regulator receiver domain; chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 2320703 11562445 Clocl_2028 Clostridium clariflavum DSM 19732 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_005046550.1 2319663 R 720554 CDS YP_005046551.1 374296360 11562446 complement(2320709..2321539) 1 NC_016627.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; methylase of chemotaxis methyl-accepting protein 2321539 11562446 Clocl_2029 Clostridium clariflavum DSM 19732 methylase of chemotaxis methyl-accepting protein YP_005046551.1 2320709 R 720554 CDS YP_005046552.1 374296361 11562447 complement(2321635..2322132) 1 NC_016627.1 PFAM: CheW-like domain; chemotaxis signal transduction protein 2322132 11562447 Clocl_2030 Clostridium clariflavum DSM 19732 chemotaxis signal transduction protein YP_005046552.1 2321635 R 720554 CDS YP_005046553.1 374296362 11562448 complement(2322244..2324388) 1 NC_016627.1 PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain; chemotaxis protein histidine kinase-like protein 2324388 11562448 Clocl_2031 Clostridium clariflavum DSM 19732 chemotaxis protein histidine kinase-like protein YP_005046553.1 2322244 R 720554 CDS YP_005046554.1 374296363 11562449 complement(2324455..2324808) 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 2324808 11562449 Clocl_2032 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005046554.1 2324455 R 720554 CDS YP_005046555.1 374296364 11562450 complement(2325352..2326218) 1 NC_016627.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A; sporulation transcription factor Spo0A 2326218 11562450 Clocl_2033 Clostridium clariflavum DSM 19732 sporulation transcription factor Spo0A YP_005046555.1 2325352 R 720554 CDS YP_005046556.1 374296365 11562451 complement(2326458..2327777) 1 NC_016627.1 PFAM: SpoIVB peptidase S55; PDZ domain (Also known as DHR or GLGF); TIGRFAM: stage IV sporulation protein B; manually curated; stage IV sporulation protein B 2327777 11562451 Clocl_2034 Clostridium clariflavum DSM 19732 stage IV sporulation protein B YP_005046556.1 2326458 R 720554 CDS YP_005046557.1 374296366 11562452 complement(2328178..2329905) 1 NC_016627.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA replication and repair protein RecN 2329905 11562452 Clocl_2035 Clostridium clariflavum DSM 19732 DNA replication and repair protein RecN YP_005046557.1 2328178 R 720554 CDS YP_005046558.1 374296367 11562453 complement(2329933..2330400) 1 NC_016627.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor; ArgR family transcriptional regulator 2330400 11562453 Clocl_2036 Clostridium clariflavum DSM 19732 ArgR family transcriptional regulator YP_005046558.1 2329933 R 720554 CDS YP_005046559.1 374296368 11562454 complement(2330402..2331271) 1 NC_016627.1 PFAM: ATP-NAD kinase; putative sugar kinase 2331271 11562454 Clocl_2037 Clostridium clariflavum DSM 19732 putative sugar kinase YP_005046559.1 2330402 R 720554 CDS YP_005046560.1 374296369 11562455 complement(2331444..2331908) 1 NC_016627.1 hypothetical protein 2331908 11562455 Clocl_2038 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046560.1 2331444 R 720554 CDS YP_005046561.1 374296370 11562456 complement(2331926..2332717) 1 NC_016627.1 PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 2332717 11562456 Clocl_2039 Clostridium clariflavum DSM 19732 tetratricopeptide repeat protein YP_005046561.1 2331926 R 720554 CDS YP_005046562.1 374296371 11562457 complement(2333010..2334899) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase 2334899 11562457 Clocl_2040 Clostridium clariflavum DSM 19732 beta-glucosidase-like glycosyl hydrolase YP_005046562.1 2333010 R 720554 CDS YP_005046563.1 374296372 11562458 2335324..2335479 1 NC_016627.1 hypothetical protein 2335479 11562458 Clocl_2041 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046563.1 2335324 D 720554 CDS YP_005046564.1 374296373 11562459 2335929..2338175 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; D-alanyl-D-alanine carboxypeptidase; L,D-transpeptidase catalytic domain; D-alanyl-D-alanine carboxypeptidase 2338175 11562459 Clocl_2042 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine carboxypeptidase YP_005046564.1 2335929 D 720554 CDS YP_005046565.1 374296374 11562460 complement(2338300..2339757) 1 NC_016627.1 manually curated; hypothetical protein 2339757 11562460 Clocl_2043 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046565.1 2338300 R 720554 CDS YP_005046566.1 374296375 11562461 complement(2339844..2341037) 1 NC_016627.1 hypothetical protein 2341037 11562461 Clocl_2044 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046566.1 2339844 R 720554 CDS YP_005046567.1 374296376 11562462 complement(2341056..2341793) 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor 2341793 11562462 Clocl_2045 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005046567.1 2341056 R 720554 CDS YP_005046568.1 374296377 11562463 complement(2342112..2344571) 1 NC_016627.1 PFAM: Regulator of chromosome condensation (RCC1) repeat; Dockerin type I repeat; RCC1 domain-containing protein, alpha-tubulin suppressor 2344571 11562463 Clocl_2046 Clostridium clariflavum DSM 19732 RCC1 domain-containing protein, alpha-tubulin suppressor YP_005046568.1 2342112 R 720554 CDS YP_005046569.1 374296378 11562464 complement(2345161..2345283) 1 NC_016627.1 hypothetical protein 2345283 11562464 Clocl_2047 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046569.1 2345161 R 720554 CDS YP_005046570.1 374296379 11562465 2345516..2345755 1 NC_016627.1 hypothetical protein 2345755 11562465 Clocl_2048 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046570.1 2345516 D 720554 CDS YP_005046571.1 374296380 11562466 complement(2345895..2348459) 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 2348459 11562466 Clocl_2049 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005046571.1 2345895 R 720554 CDS YP_005046572.1 374296381 11562467 complement(2348456..2349139) 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 2349139 11562467 Clocl_2050 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005046572.1 2348456 R 720554 CDS YP_005046573.1 374296382 11562468 complement(2349318..2350280) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 2350280 11562468 Clocl_2051 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005046573.1 2349318 R 720554 CDS YP_005046574.1 374296383 11562469 complement(2350321..2351016) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2351016 11562469 Clocl_2052 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005046574.1 2350321 R 720554 CDS YP_005046575.1 374296384 11562471 2351575..2352285 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2352285 11562471 Clocl_2054 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005046575.1 2351575 D 720554 CDS YP_005046576.1 374296385 11562472 2352293..2354056 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; signal transduction histidine kinase 2354056 11562472 Clocl_2055 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005046576.1 2352293 D 720554 CDS YP_005046577.1 374296386 11562473 2354398..2355930 1 NC_016627.1 hypothetical protein 2355930 11562473 Clocl_2056 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046577.1 2354398 D 720554 CDS YP_005046578.1 374296387 11562474 complement(2356470..2357279) 1 NC_016627.1 PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein; hemolysin A 2357279 11562474 Clocl_2057 Clostridium clariflavum DSM 19732 hemolysin A YP_005046578.1 2356470 R 720554 CDS YP_005046579.1 374296388 11562475 complement(2357322..2359205) 1 NC_016627.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 2359205 11562475 Clocl_2058 Clostridium clariflavum DSM 19732 1-deoxy-D-xylulose-5-phosphate synthase YP_005046579.1 2357322 R 720554 CDS YP_005046580.1 374296389 11562476 complement(2359218..2359856) 1 NC_016627.1 hypothetical protein 2359856 11562476 Clocl_2059 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046580.1 2359218 R 720554 CDS YP_005046581.1 374296390 11562477 complement(2360836..2361276) 1 NC_016627.1 PFAM: Divergent PAP2 family; hypothetical protein 2361276 11562477 Clocl_2060 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046581.1 2360836 R 720554 CDS YP_005046582.1 374296391 11562478 complement(2361306..2362196) 1 NC_016627.1 PFAM: Polyprenyl synthetase; geranylgeranyl pyrophosphate synthase 2362196 11562478 Clocl_2061 Clostridium clariflavum DSM 19732 geranylgeranyl pyrophosphate synthase YP_005046582.1 2361306 R 720554 CDS YP_005046583.1 374296392 11562479 complement(2362225..2362455) 1 NC_016627.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; Exodeoxyribonuclease VII small subunit 2362455 11562479 Clocl_2062 Clostridium clariflavum DSM 19732 Exodeoxyribonuclease VII small subunit YP_005046583.1 2362225 R 720554 CDS YP_005046584.1 374296393 11562480 complement(2362458..2363741) 1 NC_016627.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; Exodeoxyribonuclease VII large subunit 2363741 11562480 Clocl_2063 Clostridium clariflavum DSM 19732 Exodeoxyribonuclease VII large subunit YP_005046584.1 2362458 R 720554 CDS YP_005046585.1 374296394 11562481 complement(2363778..2364212) 1 NC_016627.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; transcription antitermination factor NusB 2364212 11562481 Clocl_2064 Clostridium clariflavum DSM 19732 transcription antitermination factor NusB YP_005046585.1 2363778 R 720554 CDS YP_005046586.1 374296395 11562482 complement(2364418..2364648) 1 NC_016627.1 PFAM: Small integral membrane protein (DUF2273); integral membrane protein 2364648 11562482 Clocl_2065 Clostridium clariflavum DSM 19732 integral membrane protein YP_005046586.1 2364418 R 720554 CDS YP_005046587.1 374296396 11562483 complement(2364660..2365208) 1 NC_016627.1 PFAM: Protein of unknown function (DUF322); hypothetical protein 2365208 11562483 Clocl_2066 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046587.1 2364660 R 720554 CDS YP_005046588.1 374296397 11562484 complement(2365450..2365854) 1 NC_016627.1 PFAM: Protein of unknown function (DUF322); hypothetical protein 2365854 11562484 Clocl_2067 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046588.1 2365450 R 720554 CDS YP_005046589.1 374296398 11562485 complement(2366002..2366679) 1 NC_016627.1 manually curated; hypothetical protein 2366679 11562485 Clocl_2068 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046589.1 2366002 R 720554 CDS YP_005046590.1 374296399 11562486 complement(2366782..2367414) 1 NC_016627.1 TIGRFAM: stage III sporulation protein AG; hypothetical protein 2367414 11562486 Clocl_2069 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046590.1 2366782 R 720554 CDS YP_005046591.1 374296400 11562487 complement(2367450..2368085) 1 NC_016627.1 PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF; manually curated; stage III sporulation protein AF 2368085 11562487 Clocl_2070 Clostridium clariflavum DSM 19732 stage III sporulation protein AF YP_005046591.1 2367450 R 720554 CDS YP_005046592.1 374296401 11562488 complement(2368090..2369307) 1 NC_016627.1 PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE; stage III sporulation protein AE 2369307 11562488 Clocl_2071 Clostridium clariflavum DSM 19732 stage III sporulation protein AE YP_005046592.1 2368090 R 720554 CDS YP_005046593.1 374296402 11562489 complement(2369326..2369715) 1 NC_016627.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD; stage III sporulation protein AD 2369715 11562489 Clocl_2072 Clostridium clariflavum DSM 19732 stage III sporulation protein AD YP_005046593.1 2369326 R 720554 CDS YP_005046594.1 374296403 11562490 complement(2369736..2369930) 1 NC_016627.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC; stage III sporulation protein AC 2369930 11562490 Clocl_2073 Clostridium clariflavum DSM 19732 stage III sporulation protein AC YP_005046594.1 2369736 R 720554 CDS YP_005046595.1 374296404 11562491 complement(2370116..2370631) 1 NC_016627.1 PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB; stage III sporulation protein AB 2370631 11562491 Clocl_2074 Clostridium clariflavum DSM 19732 stage III sporulation protein AB YP_005046595.1 2370116 R 720554 CDS YP_005046596.1 374296405 11562492 complement(2370622..2371644) 1 NC_016627.1 TIGRFAM: stage III sporulation protein AA; stage III sporulation protein AA 2371644 11562492 Clocl_2075 Clostridium clariflavum DSM 19732 stage III sporulation protein AA YP_005046596.1 2370622 R 720554 CDS YP_005046597.1 374296406 11562493 complement(2371908..2373176) 1 NC_016627.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; uracil-xanthine permease 2373176 11562493 Clocl_2076 Clostridium clariflavum DSM 19732 uracil-xanthine permease YP_005046597.1 2371908 R 720554 CDS YP_005046598.1 374296407 11562494 2373661..2375346 1 NC_016627.1 TIGRFAM: RNA polymerase sigma-I factor; manually curated; hypothetical protein 2375346 11562494 Clocl_2077 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046598.1 2373661 D 720554 CDS YP_005046599.1 374296408 11562495 complement(2375497..2376459) 1 NC_016627.1 hypothetical protein 2376459 11562495 Clocl_2078 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046599.1 2375497 R 720554 CDS YP_005046600.1 374296409 11562496 complement(2376578..2378098) 1 NC_016627.1 PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 2378098 11562496 Clocl_2079 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005046600.1 2376578 R 720554 CDS YP_005046601.1 374296410 11562497 complement(2378336..2379325) 1 NC_016627.1 PFAM: Dihydrodipicolinate reductase, N-terminus; TIGRFAM: diaminopimelate dehydrogenase; diaminopimelate dehydrogenase 2379325 11562497 Clocl_2080 Clostridium clariflavum DSM 19732 diaminopimelate dehydrogenase YP_005046601.1 2378336 R 720554 CDS YP_005046602.1 374296411 11562498 complement(2379418..2382075) 1 NC_016627.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; DNA segregation ATPase FtsK 2382075 11562498 Clocl_2081 Clostridium clariflavum DSM 19732 DNA segregation ATPase FtsK YP_005046602.1 2379418 R 720554 CDS YP_005046603.1 374296412 11562499 complement(2382245..2383474) 1 NC_016627.1 hypothetical protein 2383474 11562499 Clocl_2082 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046603.1 2382245 R 720554 CDS YP_005046604.1 374296413 11562500 2384241..2386223 1 NC_016627.1 PFAM: Glycosyl hydrolase family 10; Glycosyl hydrolases family 11; beta-1,4-xylanase 2386223 11562500 Clocl_2083 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005046604.1 2384241 D 720554 CDS YP_005046605.1 374296414 11562501 complement(2386848..2388470) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 2388470 11562501 Clocl_2084 Clostridium clariflavum DSM 19732 transposase YP_005046605.1 2386848 R 720554 CDS YP_005046606.1 374296415 11562502 complement(2388593..2389510) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 2389510 11562502 Clocl_2085 Clostridium clariflavum DSM 19732 carbohydrate ABC transporter membrane protein 2 YP_005046606.1 2388593 R 720554 CDS YP_005046607.1 374296416 11562503 complement(2389528..2390496) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type polysaccharide transport system, permease component 2390496 11562503 Clocl_2086 Clostridium clariflavum DSM 19732 ABC-type polysaccharide transport system, permease component YP_005046607.1 2389528 R 720554 CDS YP_005046608.1 374296417 11562504 complement(2390648..2392327) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein 2392327 11562504 Clocl_2087 Clostridium clariflavum DSM 19732 sugar ABC transporter periplasmic protein YP_005046608.1 2390648 R 720554 CDS YP_005046609.1 374296418 11562505 complement(2392517..2393755) 1 NC_016627.1 hypothetical protein 2393755 11562505 Clocl_2088 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046609.1 2392517 R 720554 CDS YP_005046610.1 374296419 11562506 complement(2393757..2395418) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter transmembrane region; ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain 2395418 11562506 Clocl_2089 Clostridium clariflavum DSM 19732 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain YP_005046610.1 2393757 R 720554 CDS YP_005046611.1 374296420 11562507 complement(2395415..2395876) 1 NC_016627.1 hypothetical protein 2395876 11562507 Clocl_2090 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046611.1 2395415 R 720554 CDS YP_005046612.1 374296421 11562508 complement(2395873..2396139) 1 NC_016627.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); Coenzyme PQQ synthesis protein D (PqqD) 2396139 11562508 Clocl_2091 Clostridium clariflavum DSM 19732 Coenzyme PQQ synthesis protein D (PqqD) YP_005046612.1 2395873 R 720554 CDS YP_005046613.1 374296422 11562509 complement(2396206..2396907) 1 NC_016627.1 hypothetical protein 2396907 11562509 Clocl_2092 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046613.1 2396206 R 720554 CDS YP_005046614.1 374296423 11562510 complement(2397147..2397260) 1 NC_016627.1 hypothetical protein 2397260 11562510 Clocl_2093 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046614.1 2397147 R 720554 CDS YP_005046615.1 374296424 11562511 complement(2397394..2399799) 1 NC_016627.1 PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat; hypothetical protein 2399799 11562511 Clocl_2094 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046615.1 2397394 R 720554 CDS YP_005046616.1 374296425 11562512 complement(2399950..2401305) 1 NC_016627.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; putative efflux protein, MATE family 2401305 11562512 Clocl_2095 Clostridium clariflavum DSM 19732 putative efflux protein, MATE family YP_005046616.1 2399950 R 720554 CDS YP_005046617.1 374296426 11562513 complement(2401552..2402814) 1 NC_016627.1 PFAM: Protein of unknown function (DUF3237); Dockerin type I repeat; dockerin-like protein 2402814 11562513 Clocl_2096 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046617.1 2401552 R 720554 CDS YP_005046618.1 374296427 11562514 complement(2403074..2404876) 1 NC_016627.1 PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; lysophospholipase L1-like esterase 2404876 11562514 Clocl_2097 Clostridium clariflavum DSM 19732 lysophospholipase L1-like esterase YP_005046618.1 2403074 R 720554 CDS YP_005046619.1 374296428 11562515 complement(2405199..2406740) 1 NC_016627.1 PFAM: Alpha-L-arabinofuranosidase B (ABFB); Alpha-L-arabinofuranosidase B (ABFB) 2406740 11562515 Clocl_2098 Clostridium clariflavum DSM 19732 Alpha-L-arabinofuranosidase B (ABFB) YP_005046619.1 2405199 R 720554 CDS YP_005046620.1 374296429 11562516 complement(2406782..2407513) 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor 2407513 11562516 Clocl_2099 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005046620.1 2406782 R 720554 CDS YP_005046621.1 374296430 11562517 complement(2408323..2409054) 1 NC_016627.1 PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase 2409054 11562517 Clocl_2100 Clostridium clariflavum DSM 19732 glycerophosphoryl diester phosphodiesterase YP_005046621.1 2408323 R 720554 CDS YP_005046622.1 374296431 11562518 complement(2409463..2409831) 1 NC_016627.1 hypothetical protein 2409831 11562518 Clocl_2101 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046622.1 2409463 R 720554 CDS YP_005046623.1 374296432 11562519 complement(2409959..2410450) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1877); hypothetical protein 2410450 11562519 Clocl_2102 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046623.1 2409959 R 720554 CDS YP_005046624.1 374296433 11562520 2410865..2412154 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 2412154 11562520 Clocl_2103 Clostridium clariflavum DSM 19732 transposase YP_005046624.1 2410865 D 720554 CDS YP_005046625.1 374296434 11562521 complement(2412348..2412743) 1 NC_016627.1 hypothetical protein 2412743 11562521 Clocl_2104 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046625.1 2412348 R 720554 CDS YP_005046626.1 374296435 11562522 2413119..2413289 1 NC_016627.1 hypothetical protein 2413289 11562522 Clocl_2105 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046626.1 2413119 D 720554 CDS YP_005046627.1 374296436 11562523 complement(2413916..2414203) 1 NC_016627.1 hypothetical protein 2414203 11562523 Clocl_2106 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046627.1 2413916 R 720554 CDS YP_005046628.1 374296437 11562524 complement(2414222..2418025) 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 2418025 11562524 Clocl_2107 Clostridium clariflavum DSM 19732 transglutaminase YP_005046628.1 2414222 R 720554 CDS YP_005046629.1 374296438 11562525 complement(2418166..2422791) 1 NC_016627.1 PFAM: S-layer homology domain; squalene cyclase 2422791 11562525 Clocl_2108 Clostridium clariflavum DSM 19732 squalene cyclase YP_005046629.1 2418166 R 720554 CDS YP_005046630.1 374296439 11562527 complement(2423477..2424583) 1 NC_016627.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; dinuclear metal center protein, YbgI/SA1388 family 2424583 11562527 Clocl_2110 Clostridium clariflavum DSM 19732 dinuclear metal center protein, YbgI/SA1388 family YP_005046630.1 2423477 R 720554 CDS YP_005046631.1 374296440 11562528 complement(2424596..2425318) 1 NC_016627.1 PFAM: Family of unknown function (DUF633); putative SAM-dependent methyltransferase 2425318 11562528 Clocl_2111 Clostridium clariflavum DSM 19732 putative SAM-dependent methyltransferase YP_005046631.1 2424596 R 720554 CDS YP_005046632.1 374296441 11562529 2425477..2425659 1 NC_016627.1 hypothetical protein 2425659 11562529 Clocl_2112 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046632.1 2425477 D 720554 CDS YP_005046633.1 374296442 11562530 complement(2425848..2426552) 1 NC_016627.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding protein 2426552 11562530 Clocl_2113 Clostridium clariflavum DSM 19732 4Fe-4S binding protein YP_005046633.1 2425848 R 720554 CDS YP_005046634.1 374296443 11562531 2426693..2427361 1 NC_016627.1 PFAM: Cyclic nucleotide-binding domain; cAMP-binding protein 2427361 11562531 Clocl_2114 Clostridium clariflavum DSM 19732 cAMP-binding protein YP_005046634.1 2426693 D 720554 CDS YP_005046635.1 374296444 11562534 complement(2427914..2428135) 1 NC_016627.1 PFAM: Rubrerythrin; rubrerythrin 2428135 11562534 Clocl_2117 Clostridium clariflavum DSM 19732 rubrerythrin YP_005046635.1 2427914 R 720554 CDS YP_005046636.1 374296445 11562535 complement(2428534..2429613) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 factor, region 1.1; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; manually curated; RNA polymerase, sigma 38 subunit, RpoS 2429613 11562535 Clocl_2118 Clostridium clariflavum DSM 19732 RNA polymerase, sigma 38 subunit, RpoS YP_005046636.1 2428534 R 720554 CDS YP_005046637.1 374296446 11562536 complement(2429648..2431435) 1 NC_016627.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; manually curated; DNA primase, catalytic core 2431435 11562536 Clocl_2119 Clostridium clariflavum DSM 19732 DNA primase, catalytic core YP_005046637.1 2429648 R 720554 CDS YP_005046638.1 374296447 11562537 complement(2431994..2432989) 1 NC_016627.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase, putative 2432989 11562537 Clocl_2120 Clostridium clariflavum DSM 19732 deoxyguanosinetriphosphate triphosphohydrolase, putative YP_005046638.1 2431994 R 720554 CDS YP_005046639.1 374296448 11562538 complement(2433168..2433473) 1 NC_016627.1 hypothetical protein 2433473 11562538 Clocl_2121 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046639.1 2433168 R 720554 CDS YP_005046640.1 374296449 11562539 complement(2433668..2434702) 1 NC_016627.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein 2434702 11562539 Clocl_2122 Clostridium clariflavum DSM 19732 putative domain HDIG-containing protein YP_005046640.1 2433668 R 720554 CDS YP_005046641.1 374296450 11562540 2435038..2435319 1 NC_016627.1 hypothetical protein 2435319 11562540 Clocl_2123 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046641.1 2435038 D 720554 CDS YP_005046642.1 374296451 11562541 complement(2435425..2435817) 1 NC_016627.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; manually curated; L-aspartate 1-decarboxylase 2435817 11562541 Clocl_2124 Clostridium clariflavum DSM 19732 L-aspartate 1-decarboxylase YP_005046642.1 2435425 R 720554 CDS YP_005046643.1 374296452 11562542 complement(2435820..2436665) 1 NC_016627.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; pantoate--beta-alanine ligase 2436665 11562542 Clocl_2125 Clostridium clariflavum DSM 19732 pantoate--beta-alanine ligase YP_005046643.1 2435820 R 720554 CDS YP_005046644.1 374296453 11562543 complement(2436776..2437621) 1 NC_016627.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; ketopantoate hydroxymethyltransferase 2437621 11562543 Clocl_2126 Clostridium clariflavum DSM 19732 ketopantoate hydroxymethyltransferase YP_005046644.1 2436776 R 720554 CDS YP_005046645.1 374296454 11562544 complement(2438094..2439038) 1 NC_016627.1 PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein translocase subunit secF 2439038 11562544 Clocl_2127 Clostridium clariflavum DSM 19732 protein translocase subunit secF YP_005046645.1 2438094 R 720554 CDS YP_005046646.1 374296455 11562545 complement(2439031..2440365) 1 NC_016627.1 PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein, SecD/SecF family 2440365 11562545 Clocl_2128 Clostridium clariflavum DSM 19732 protein-export membrane protein, SecD/SecF family YP_005046646.1 2439031 R 720554 CDS YP_005046647.1 374296456 11562546 complement(2440471..2441136) 1 NC_016627.1 PFAM: HD domain; HD domain-containing protein 2441136 11562546 Clocl_2129 Clostridium clariflavum DSM 19732 HD domain-containing protein YP_005046647.1 2440471 R 720554 CDS YP_005046648.1 374296457 11562547 complement(2441280..2442626) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: six-Cys-in-45 modification radical SAM protein; radical SAM additional 4Fe4S-binding domain; six-Cys-in-45 modification radical SAM protein 2442626 11562547 Clocl_2130 Clostridium clariflavum DSM 19732 six-Cys-in-45 modification radical SAM protein YP_005046648.1 2441280 R 720554 CDS YP_005046649.1 374296458 11562548 complement(2442828..2442968) 1 NC_016627.1 TIGRFAM: rSAM-modified six-cysteine peptide SCIFF; manually curated; rSAM-modified six-cysteine peptide SCIFF 2442968 11562548 Clocl_2131 Clostridium clariflavum DSM 19732 rSAM-modified six-cysteine peptide SCIFF YP_005046649.1 2442828 R 720554 CDS YP_005046650.1 374296459 11562549 complement(2443132..2444067) 1 NC_016627.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase 2444067 11562549 Clocl_2132 Clostridium clariflavum DSM 19732 RluA family pseudouridine synthase YP_005046650.1 2443132 R 720554 CDS YP_005046651.1 374296460 11562550 complement(2444085..2444558) 1 NC_016627.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 2444558 11562550 Clocl_2133 Clostridium clariflavum DSM 19732 lipoprotein signal peptidase YP_005046651.1 2444085 R 720554 CDS YP_005046652.1 374296461 11562551 complement(2444919..2446169) 1 NC_016627.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase, putative 2446169 11562551 Clocl_2134 Clostridium clariflavum DSM 19732 deoxyguanosinetriphosphate triphosphohydrolase, putative YP_005046652.1 2444919 R 720554 CDS YP_005046653.1 374296462 11562552 complement(2446398..2447189) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; manually curated; nitrate/sulfonate/bicarbonate ABC transporter permease 2447189 11562552 Clocl_2135 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046653.1 2446398 R 720554 CDS YP_005046654.1 374296463 11562553 complement(2447216..2447989) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; manually curated; nitrate/sulfonate/bicarbonate ABC transporter permease 2447989 11562553 Clocl_2136 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046654.1 2447216 R 720554 CDS YP_005046655.1 374296464 11562554 complement(2448014..2448178) 1 NC_016627.1 PFAM: Uncharacterized small protein (DUF2292); hypothetical protein 2448178 11562554 Clocl_2137 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046655.1 2448014 R 720554 CDS YP_005046656.1 374296465 11562555 complement(2448463..2449779) 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; nitrogenase molybdenum-iron protein, alpha and beta chains 2449779 11562555 Clocl_2138 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005046656.1 2448463 R 720554 CDS YP_005046657.1 374296466 11562556 complement(2449763..2451253) 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains 2451253 11562556 Clocl_2139 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005046657.1 2449763 R 720554 CDS YP_005046658.1 374296467 11562557 complement(2451286..2452107) 1 NC_016627.1 PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; Mo-nitrogenase iron protein subunit NifH 2452107 11562557 Clocl_2140 Clostridium clariflavum DSM 19732 Mo-nitrogenase iron protein subunit NifH YP_005046658.1 2451286 R 720554 CDS YP_005046659.1 374296468 11562558 complement(2452502..2453584) 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2453584 11562558 Clocl_2141 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005046659.1 2452502 R 720554 CDS YP_005046660.1 374296469 11562559 complement(2453928..2454917) 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2454917 11562559 Clocl_2142 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005046660.1 2453928 R 720554 CDS YP_005046661.1 374296470 11562560 complement(2454928..2455707) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 2455707 11562560 Clocl_2143 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046661.1 2454928 R 720554 CDS YP_005046662.1 374296471 11562561 complement(2455835..2456797) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 2456797 11562561 Clocl_2144 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046662.1 2455835 R 720554 CDS YP_005046663.1 374296472 11562562 complement(2456976..2457374) 1 NC_016627.1 PFAM: Pyridoxamine 5'-phosphate oxidase; hypothetical protein 2457374 11562562 Clocl_2145 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046663.1 2456976 R 720554 CDS YP_005046664.1 374296473 11562563 complement(2457726..2457851) 1 NC_016627.1 hypothetical protein 2457851 11562563 Clocl_2146 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046664.1 2457726 R 720554 CDS YP_005046665.1 374296474 11562564 complement(2457848..2458123) 1 NC_016627.1 hypothetical protein 2458123 11562564 Clocl_2147 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046665.1 2457848 R 720554 CDS YP_005046666.1 374296475 11562565 complement(2458370..2460028) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; dipeptide ABC transporter periplasmic protein 2460028 11562565 Clocl_2148 Clostridium clariflavum DSM 19732 dipeptide ABC transporter periplasmic protein YP_005046666.1 2458370 R 720554 CDS YP_005046667.1 374296476 11562566 complement(2460044..2460886) 1 NC_016627.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; hypothetical protein 2460886 11562566 Clocl_2149 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046667.1 2460044 R 720554 CDS YP_005046668.1 374296477 11562567 2461217..2461558 1 NC_016627.1 hypothetical protein 2461558 11562567 Clocl_2150 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046668.1 2461217 D 720554 CDS YP_005046669.1 374296478 11562568 2461560..2462762 1 NC_016627.1 PFAM: Sodium/hydrogen exchanger family; Kef-type K+ transport system membrane protein 2462762 11562568 Clocl_2151 Clostridium clariflavum DSM 19732 Kef-type K+ transport system membrane protein YP_005046669.1 2461560 D 720554 CDS YP_005046670.1 374296479 11562569 complement(2462829..2463464) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 2463464 11562569 Clocl_2152 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005046670.1 2462829 R 720554 CDS YP_005046671.1 374296480 11562570 2463718..2464599 1 NC_016627.1 hypothetical protein 2464599 11562570 Clocl_2153 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046671.1 2463718 D 720554 CDS YP_005046672.1 374296481 11562571 complement(2464684..2466411) 1 NC_016627.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutamyl-tRNA synthetase, archaeal and eukaryotic family; glutaminyl-tRNA synthetase 2466411 11562571 Clocl_2154 Clostridium clariflavum DSM 19732 glutaminyl-tRNA synthetase YP_005046672.1 2464684 R 720554 CDS YP_005046673.1 374296482 11562572 complement(2466466..2466891) 1 NC_016627.1 PFAM: GtrA-like protein; hypothetical protein 2466891 11562572 Clocl_2155 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046673.1 2466466 R 720554 CDS YP_005046674.1 374296483 11562573 complement(2466937..2468433) 1 NC_016627.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; IMP dehydrogenase/GMP reductase 2468433 11562573 Clocl_2156 Clostridium clariflavum DSM 19732 IMP dehydrogenase/GMP reductase YP_005046674.1 2466937 R 720554 CDS YP_005046675.1 374296484 11562574 complement(2468620..2469375) 1 NC_016627.1 PFAM: short chain dehydrogenase; TIGRFAM: sepiapterin reductase; dehydrogenase 2469375 11562574 Clocl_2157 Clostridium clariflavum DSM 19732 dehydrogenase YP_005046675.1 2468620 R 720554 CDS YP_005046676.1 374296485 11562575 complement(2469889..2470497) 1 NC_016627.1 TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein 2470497 11562575 Clocl_2158 Clostridium clariflavum DSM 19732 haloacid dehalogenase superfamily protein YP_005046676.1 2469889 R 720554 CDS YP_005046677.1 374296486 11562576 2470683..2472248 1 NC_016627.1 PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase; glycine/D-amino acid oxidase, deaminating 2472248 11562576 Clocl_2159 Clostridium clariflavum DSM 19732 glycine/D-amino acid oxidase, deaminating YP_005046677.1 2470683 D 720554 CDS YP_005046678.1 374296487 11562577 complement(2472323..2472937) 1 NC_016627.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein 2472937 11562577 Clocl_2160 Clostridium clariflavum DSM 19732 putative domain HDIG-containing protein YP_005046678.1 2472323 R 720554 CDS YP_005046679.1 374296488 11562578 complement(2472912..2473073) 1 NC_016627.1 hypothetical protein 2473073 11562578 Clocl_2161 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046679.1 2472912 R 720554 CDS YP_005046680.1 374296489 11562579 complement(2473255..2473719) 1 NC_016627.1 PFAM: CheC-like family; putative inhibitor of MCP methylation, CheC 2473719 11562579 Clocl_2162 Clostridium clariflavum DSM 19732 putative inhibitor of MCP methylation, CheC YP_005046680.1 2473255 R 720554 CDS YP_005046681.1 374296490 11562581 complement(2474299..2474913) 1 NC_016627.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated exonuclease, Cas4 family 2474913 11562581 Clocl_2164 Clostridium clariflavum DSM 19732 CRISPR-associated exonuclease, Cas4 family YP_005046681.1 2474299 R 720554 CDS YP_005046682.1 374296491 11562582 complement(2474888..2475178) 1 NC_016627.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; CRISPR-associated protein, Cas2 family 2475178 11562582 Clocl_2165 Clostridium clariflavum DSM 19732 CRISPR-associated protein, Cas2 family YP_005046682.1 2474888 R 720554 CDS YP_005046683.1 374296492 11562583 complement(2475172..2476167) 1 NC_016627.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; CRISPR-associated protein, Cas1 family 2476167 11562583 Clocl_2166 Clostridium clariflavum DSM 19732 CRISPR-associated protein, Cas1 family YP_005046683.1 2475172 R 720554 CDS YP_005046684.1 374296493 11562584 complement(2478926..2480401) 1 NC_016627.1 PFAM: CRISPR-associated protein (Cas_Cas02710); TIGRFAM: CRISPR-associated protein, TIGR02710 family; CRISPR-associated protein 2480401 11562584 Clocl_2167 Clostridium clariflavum DSM 19732 CRISPR-associated protein YP_005046684.1 2478926 R 720554 CDS YP_005046685.1 374296494 11562585 complement(2480453..2481700) 1 NC_016627.1 PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein; CRISPR-associated protein 2481700 11562585 Clocl_2168 Clostridium clariflavum DSM 19732 CRISPR-associated protein YP_005046685.1 2480453 R 720554 CDS YP_005046686.1 374296495 11562586 complement(2481750..2483825) 1 NC_016627.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated protein; manually curated; CRISPR-associated protein 2483825 11562586 Clocl_2169 Clostridium clariflavum DSM 19732 CRISPR-associated protein YP_005046686.1 2481750 R 720554 CDS YP_005046687.1 374296496 11562587 complement(2483840..2484205) 1 NC_016627.1 hypothetical protein 2484205 11562587 Clocl_2170 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046687.1 2483840 R 720554 CDS YP_005046688.1 374296497 11562588 complement(2484212..2485543) 1 NC_016627.1 PFAM: RAMP superfamily; putative RAMP superfamily protein probably involved in DNA repair 2485543 11562588 Clocl_2171 Clostridium clariflavum DSM 19732 putative RAMP superfamily protein probably involved in DNA repair YP_005046688.1 2484212 R 720554 CDS YP_005046689.1 374296498 11562589 complement(2485540..2487141) 1 NC_016627.1 PFAM: RAMP superfamily; RAMP superfamily protein 2487141 11562589 Clocl_2172 Clostridium clariflavum DSM 19732 RAMP superfamily protein YP_005046689.1 2485540 R 720554 CDS YP_005046690.1 374296499 11562590 complement(2487134..2487808) 1 NC_016627.1 PFAM: RAMP superfamily; putative RAMP superfamily protein probably involved in DNA repair 2487808 11562590 Clocl_2173 Clostridium clariflavum DSM 19732 putative RAMP superfamily protein probably involved in DNA repair YP_005046690.1 2487134 R 720554 CDS YP_005046691.1 374296500 11562591 complement(2487811..2489274) 1 NC_016627.1 hypothetical protein 2489274 11562591 Clocl_2174 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046691.1 2487811 R 720554 CDS YP_005046692.1 374296501 11562592 complement(2489321..2489980) 1 NC_016627.1 hypothetical protein 2489980 11562592 Clocl_2175 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046692.1 2489321 R 720554 CDS YP_005046693.1 374296502 11562593 complement(2490008..2492404) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase, Cas3 family 2492404 11562593 Clocl_2176 Clostridium clariflavum DSM 19732 CRISPR-associated helicase, Cas3 family YP_005046693.1 2490008 R 720554 CDS YP_005046694.1 374296503 11562594 complement(2492418..2493131) 1 NC_016627.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/HMARI; CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein, Cas5h family 2493131 11562594 Clocl_2177 Clostridium clariflavum DSM 19732 CRISPR-associated protein, Cas5h family YP_005046694.1 2492418 R 720554 CDS YP_005046695.1 374296504 11562595 complement(2493146..2494063) 1 NC_016627.1 PFAM: Family of unknown function (DUF694); TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI; Csh2 family CRISPR-associated protein 2494063 11562595 Clocl_2178 Clostridium clariflavum DSM 19732 Csh2 family CRISPR-associated protein YP_005046695.1 2493146 R 720554 CDS YP_005046696.1 374296505 11562596 complement(2494060..2495940) 1 NC_016627.1 PFAM: CRISPR-associated protein TM1802 (cas_TM1802); TIGRFAM: CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI; CRISPR-associated protein, TM1802 family; manually curated; CRISPR-associated protein, Csh1 family 2495940 11562596 Clocl_2179 Clostridium clariflavum DSM 19732 CRISPR-associated protein, Csh1 family YP_005046696.1 2494060 R 720554 CDS YP_005046697.1 374296506 11562597 complement(2502349..2504202) 1 NC_016627.1 PFAM: Protein of unknown function DUF115; hypothetical protein 2504202 11562597 Clocl_2180 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046697.1 2502349 R 720554 CDS YP_005046698.1 374296507 11562598 complement(2504271..2504726) 1 NC_016627.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; transcriptional regulator NrdR 2504726 11562598 Clocl_2181 Clostridium clariflavum DSM 19732 transcriptional regulator NrdR YP_005046698.1 2504271 R 720554 CDS YP_005046699.1 374296508 11562599 complement(2504953..2505222) 1 NC_016627.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family; YlmC/YmxH family sporulation protein 2505222 11562599 Clocl_2182 Clostridium clariflavum DSM 19732 YlmC/YmxH family sporulation protein YP_005046699.1 2504953 R 720554 CDS YP_005046700.1 374296509 11562600 complement(2505392..2506165) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma-subunit RpsG/SigG 2506165 11562600 Clocl_2183 Clostridium clariflavum DSM 19732 RNA polymerase sigma-subunit RpsG/SigG YP_005046700.1 2505392 R 720554 CDS YP_005046701.1 374296510 11562601 complement(2506334..2507068) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor; RNA polymerase sigma-29 subunit SigE 2507068 11562601 Clocl_2184 Clostridium clariflavum DSM 19732 RNA polymerase sigma-29 subunit SigE YP_005046701.1 2506334 R 720554 CDS YP_005046702.1 374296511 11562602 complement(2507108..2508004) 1 NC_016627.1 PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; sigma-E processing peptidase SpoIIGA 2508004 11562602 Clocl_2185 Clostridium clariflavum DSM 19732 sigma-E processing peptidase SpoIIGA YP_005046702.1 2507108 R 720554 CDS YP_005046703.1 374296512 11562603 2508353..2508667 1 NC_016627.1 hypothetical protein 2508667 11562603 Clocl_2186 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046703.1 2508353 D 720554 CDS YP_005046704.1 374296513 11562604 complement(2508784..2509878) 1 NC_016627.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ 2509878 11562604 Clocl_2187 Clostridium clariflavum DSM 19732 cell division protein FtsZ YP_005046704.1 2508784 R 720554 CDS YP_005046705.1 374296514 11562605 complement(2510089..2511324) 1 NC_016627.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; manually curated; cell division protein FtsA 2511324 11562605 Clocl_2188 Clostridium clariflavum DSM 19732 cell division protein FtsA YP_005046705.1 2510089 R 720554 CDS YP_005046706.1 374296515 11562606 complement(2511531..2511896) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1290); hypothetical protein 2511896 11562606 Clocl_2189 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046706.1 2511531 R 720554 CDS YP_005046707.1 374296516 11562607 complement(2511909..2512775) 1 NC_016627.1 PFAM: POTRA domain, FtsQ-type; cell division septal protein 2512775 11562607 Clocl_2190 Clostridium clariflavum DSM 19732 cell division septal protein YP_005046707.1 2511909 R 720554 CDS YP_005046708.1 374296517 11562609 2514009..2515412 1 NC_016627.1 PFAM: Domain of unknown function (DUF1727); Mur ligase middle domain; UDP-N-acetylmuramyl tripeptide synthase 2515412 11562609 Clocl_2192 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramyl tripeptide synthase YP_005046708.1 2514009 D 720554 CDS YP_005046709.1 374296518 11562610 2515414..2516160 1 NC_016627.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain; putative glutamine amidotransferase 2516160 11562610 Clocl_2193 Clostridium clariflavum DSM 19732 putative glutamine amidotransferase YP_005046709.1 2515414 D 720554 CDS YP_005046710.1 374296519 11562611 complement(2516223..2520338) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain; beta-1,4-xylanase 2520338 11562611 Clocl_2194 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005046710.1 2516223 R 720554 CDS YP_005046711.1 374296520 11562612 complement(2520889..2521290) 1 NC_016627.1 manually curated; hypothetical protein 2521290 11562612 Clocl_2195 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046711.1 2520889 R 720554 CDS YP_005046712.1 374296521 11562613 complement(2521452..2522267) 1 NC_016627.1 hypothetical protein 2522267 11562613 Clocl_2196 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046712.1 2521452 R 720554 CDS YP_005046713.1 374296522 11562614 complement(2522381..2524081) 1 NC_016627.1 PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase, family II 2524081 11562614 Clocl_2197 Clostridium clariflavum DSM 19732 prolyl-tRNA synthetase, family II YP_005046713.1 2522381 R 720554 CDS YP_005046714.1 374296523 11562615 complement(2524307..2525506) 1 NC_016627.1 PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 2525506 11562615 Clocl_2198 Clostridium clariflavum DSM 19732 alcohol dehydrogenase YP_005046714.1 2524307 R 720554 CDS YP_005046715.1 374296524 11562616 complement(2525617..2526183) 1 NC_016627.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; pyridoxal phosphate synthase yaaE subunit 2526183 11562616 Clocl_2199 Clostridium clariflavum DSM 19732 pyridoxal phosphate synthase yaaE subunit YP_005046715.1 2525617 R 720554 CDS YP_005046716.1 374296525 11562617 complement(2526197..2527072) 1 NC_016627.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; pyridoxal phosphate synthase yaaD subunit 2527072 11562617 Clocl_2200 Clostridium clariflavum DSM 19732 pyridoxal phosphate synthase yaaD subunit YP_005046716.1 2526197 R 720554 CDS YP_005046717.1 374296526 11562618 2527188..2528588 1 NC_016627.1 PFAM: Bacterial regulatory proteins, gntR family; transcriptional regulator with HTH domain and aminotransferase domain 2528588 11562618 Clocl_2201 Clostridium clariflavum DSM 19732 transcriptional regulator with HTH domain and aminotransferase domain YP_005046717.1 2527188 D 720554 CDS YP_005046718.1 374296527 11562619 complement(2528596..2529531) 1 NC_016627.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase A 2529531 11562619 Clocl_2202 Clostridium clariflavum DSM 19732 cysteine synthase A YP_005046718.1 2528596 R 720554 CDS YP_005046719.1 374296528 11562620 complement(2529602..2530882) 1 NC_016627.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; O-acetylhomoserine sulfhydrolase 2530882 11562620 Clocl_2203 Clostridium clariflavum DSM 19732 O-acetylhomoserine sulfhydrolase YP_005046719.1 2529602 R 720554 CDS YP_005046720.1 374296529 11562621 complement(2530951..2531400) 1 NC_016627.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator 2531400 11562621 Clocl_2204 Clostridium clariflavum DSM 19732 rrf2 family protein, putative transcriptional regulator YP_005046720.1 2530951 R 720554 CDS YP_005046721.1 374296530 11562622 complement(2531494..2531952) 1 NC_016627.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator 2531952 11562622 Clocl_2205 Clostridium clariflavum DSM 19732 rrf2 family protein, putative transcriptional regulator YP_005046721.1 2531494 R 720554 CDS YP_005046722.1 374296531 11562623 complement(2531971..2532909) 1 NC_016627.1 PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 2532909 11562623 Clocl_2206 Clostridium clariflavum DSM 19732 homoserine O-succinyltransferase YP_005046722.1 2531971 R 720554 CDS YP_005046723.1 374296532 11562624 complement(2533235..2533447) 1 NC_016627.1 PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein; copper ion binding protein 2533447 11562624 Clocl_2207 Clostridium clariflavum DSM 19732 copper ion binding protein YP_005046723.1 2533235 R 720554 CDS YP_005046724.1 374296533 11562625 complement(2533569..2536001) 1 NC_016627.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; manually curated; copper/silver-translocating P-type ATPase 2536001 11562625 Clocl_2208 Clostridium clariflavum DSM 19732 copper/silver-translocating P-type ATPase YP_005046724.1 2533569 R 720554 CDS YP_005046725.1 374296534 11562626 complement(2536079..2536603) 1 NC_016627.1 PFAM: Predicted membrane protein (DUF2318); hypothetical protein 2536603 11562626 Clocl_2209 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046725.1 2536079 R 720554 CDS YP_005046726.1 374296535 11562627 complement(2536642..2538027) 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase,HAMP domain-containing protein,histidine kinase 2538027 11562627 Clocl_2210 Clostridium clariflavum DSM 19732 histidine kinase,HAMP domain-containing protein,histidine kinase YP_005046726.1 2536642 R 720554 CDS YP_005046727.1 374296536 11562628 complement(2538017..2538730) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2538730 11562628 Clocl_2211 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005046727.1 2538017 R 720554 CDS YP_005046728.1 374296537 11562629 complement(2538810..2540195) 1 NC_016627.1 PFAM: Heavy-metal-associated domain; Cytochrome C biogenesis protein transmembrane region; hypothetical protein 2540195 11562629 Clocl_2212 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046728.1 2538810 R 720554 CDS YP_005046729.1 374296538 11562630 complement(2540263..2541813) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; manually curated; site-specific recombinase, DNA invertase Pin 2541813 11562630 Clocl_2213 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005046729.1 2540263 R 720554 CDS YP_005046730.1 374296539 11562631 complement(2541855..2542007) 1 NC_016627.1 hypothetical protein 2542007 11562631 Clocl_2214 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046730.1 2541855 R 720554 CDS YP_005046731.1 374296540 11562632 complement(2542043..2542351) 1 NC_016627.1 PFAM: ArgK protein; ArgK protein 2542351 11562632 Clocl_2215 Clostridium clariflavum DSM 19732 ArgK protein YP_005046731.1 2542043 R 720554 CDS YP_005046732.1 374296541 11562633 2542557..2543378 1 NC_016627.1 hypothetical protein 2543378 11562633 Clocl_2216 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046732.1 2542557 D 720554 CDS YP_005046733.1 374296542 11562634 complement(2543557..2544000) 1 NC_016627.1 PFAM: NUDIX domain; ADP-ribose pyrophosphatase 2544000 11562634 Clocl_2217 Clostridium clariflavum DSM 19732 ADP-ribose pyrophosphatase YP_005046733.1 2543557 R 720554 CDS YP_005046734.1 374296543 11562635 complement(2544478..2546016) 1 NC_016627.1 PFAM: Phospholipase D Active site motif; manually curated; phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase 2546016 11562635 Clocl_2218 Clostridium clariflavum DSM 19732 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase YP_005046734.1 2544478 R 720554 CDS YP_005046735.1 374296544 11562636 complement(2546161..2547774) 1 NC_016627.1 hypothetical protein 2547774 11562636 Clocl_2219 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046735.1 2546161 R 720554 CDS YP_005046736.1 374296545 11562637 complement(2547764..2548498) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2548498 11562637 Clocl_2220 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005046736.1 2547764 R 720554 CDS YP_005046737.1 374296546 11562638 complement(2548546..2549505) 1 NC_016627.1 PFAM: Acetyl xylan esterase (AXE1); acetyl esterase 2549505 11562638 Clocl_2221 Clostridium clariflavum DSM 19732 acetyl esterase YP_005046737.1 2548546 R 720554 CDS YP_005046738.1 374296547 11562639 complement(2549544..2550731) 1 NC_016627.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; nucleotidyltransferase/DNA polymerase involved in DNA repair 2550731 11562639 Clocl_2222 Clostridium clariflavum DSM 19732 nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005046738.1 2549544 R 720554 CDS YP_005046739.1 374296548 11562640 complement(2550774..2553044) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; beta-glucosidase-like glycosyl hydrolase 2553044 11562640 Clocl_2223 Clostridium clariflavum DSM 19732 beta-glucosidase-like glycosyl hydrolase YP_005046739.1 2550774 R 720554 CDS YP_005046740.1 374296549 11562641 complement(2553255..2553800) 1 NC_016627.1 hypothetical protein 2553800 11562641 Clocl_2224 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046740.1 2553255 R 720554 CDS YP_005046741.1 374296550 11562642 complement(2554037..2556163) 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; thioredoxin domain-containing protein 2556163 11562642 Clocl_2225 Clostridium clariflavum DSM 19732 thioredoxin domain-containing protein YP_005046741.1 2554037 R 720554 CDS YP_005046742.1 374296551 11562643 complement(2556454..2557323) 1 NC_016627.1 hypothetical protein 2557323 11562643 Clocl_2226 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046742.1 2556454 R 720554 CDS YP_005046743.1 374296552 11562644 complement(2557732..2558271) 1 NC_016627.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2558271 11562644 Clocl_2227 Clostridium clariflavum DSM 19732 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005046743.1 2557732 R 720554 CDS YP_005046744.1 374296553 11562645 complement(2558385..2558825) 1 NC_016627.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; acyl-CoA thioester hydrolase, YbgC/YbaW family 2558825 11562645 Clocl_2228 Clostridium clariflavum DSM 19732 acyl-CoA thioester hydrolase, YbgC/YbaW family YP_005046744.1 2558385 R 720554 CDS YP_005046745.1 374296554 11562646 complement(2558918..2559892) 1 NC_016627.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase 2559892 11562646 Clocl_2229 Clostridium clariflavum DSM 19732 6-phosphofructokinase YP_005046745.1 2558918 R 720554 CDS YP_005046746.1 374296555 11562647 complement(2560108..2560305) 1 NC_016627.1 manually curated; hypothetical protein 2560305 11562647 Clocl_2230 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046746.1 2560108 R 720554 CDS YP_005046747.1 374296556 11562648 complement(2560235..2560435) 1 NC_016627.1 hypothetical protein 2560435 11562648 Clocl_2231 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046747.1 2560235 R 720554 CDS YP_005046748.1 374296557 11562649 complement(2560410..2560643) 1 NC_016627.1 PFAM: Tryptophan RNA-binding attenuator protein; Tryptophan RNA-binding attenuator protein 2560643 11562649 Clocl_2232 Clostridium clariflavum DSM 19732 Tryptophan RNA-binding attenuator protein YP_005046748.1 2560410 R 720554 CDS YP_005046749.1 374296558 11562650 complement(2560818..2564327) 1 NC_016627.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA-directed DNA polymerase III PolC 2564327 11562650 Clocl_2233 Clostridium clariflavum DSM 19732 DNA-directed DNA polymerase III PolC YP_005046749.1 2560818 R 720554 CDS YP_005046750.1 374296559 11562651 complement(2564461..2566203) 1 NC_016627.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphomannomutase 2566203 11562651 Clocl_2234 Clostridium clariflavum DSM 19732 phosphomannomutase YP_005046750.1 2564461 R 720554 CDS YP_005046751.1 374296560 11562652 complement(2567155..2568384) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 2568384 11562652 Clocl_2235 Clostridium clariflavum DSM 19732 transposase YP_005046751.1 2567155 R 720554 CDS YP_005046752.1 374296561 11562653 2568685..2569668 1 NC_016627.1 PFAM: Helix-turn-helix; manually curated; putative transcription factor, MBF1 like protein 2569668 11562653 Clocl_2236 Clostridium clariflavum DSM 19732 putative transcription factor, MBF1 like protein YP_005046752.1 2568685 D 720554 CDS YP_005046753.1 374296562 11562654 2569965..2570186 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF896); hypothetical protein 2570186 11562654 Clocl_2237 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046753.1 2569965 D 720554 CDS YP_005046754.1 374296563 11562655 complement(2570706..2571356) 1 NC_016627.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 2571356 11562655 Clocl_2239 Clostridium clariflavum DSM 19732 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_005046754.1 2570706 R 720554 CDS YP_005046755.1 374296564 11562656 complement(2571349..2572524) 1 NC_016627.1 PFAM: Histidine kinase; Sensor protein DegS; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 2572524 11562656 Clocl_2240 Clostridium clariflavum DSM 19732 histidine kinase YP_005046755.1 2571349 R 720554 CDS YP_005046756.1 374296565 11562657 2572886..2574154 1 NC_016627.1 PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ; sporulation integral membrane protein YlbJ 2574154 11562657 Clocl_2241 Clostridium clariflavum DSM 19732 sporulation integral membrane protein YlbJ YP_005046756.1 2572886 D 720554 CDS YP_005046757.1 374296566 11562658 complement(2574300..2574737) 1 NC_016627.1 hypothetical protein 2574737 11562658 Clocl_2242 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046757.1 2574300 R 720554 CDS YP_005046758.1 374296567 11562659 complement(2574885..2575364) 1 NC_016627.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; pantetheine-phosphate adenylyltransferase 2575364 11562659 Clocl_2243 Clostridium clariflavum DSM 19732 pantetheine-phosphate adenylyltransferase YP_005046758.1 2574885 R 720554 CDS YP_005046759.1 374296568 11562660 complement(2575371..2575868) 1 NC_016627.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; RNA methyltransferase, RsmD family 2575868 11562660 Clocl_2244 Clostridium clariflavum DSM 19732 RNA methyltransferase, RsmD family YP_005046759.1 2575371 R 720554 CDS YP_005046760.1 374296569 11562661 complement(2576038..2578119) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG 2578119 11562661 Clocl_2245 Clostridium clariflavum DSM 19732 ATP-dependent DNA helicase RecG YP_005046760.1 2576038 R 720554 CDS YP_005046761.1 374296570 11562662 2578313..2578501 1 NC_016627.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28P 2578501 11562662 Clocl_2246 Clostridium clariflavum DSM 19732 50S ribosomal protein L28P YP_005046761.1 2578313 D 720554 CDS YP_005046762.1 374296571 11562663 complement(2578906..2579169) 1 NC_016627.1 PFAM: Transglycosylase associated protein; transglycosylase 2579169 11562663 Clocl_2247 Clostridium clariflavum DSM 19732 transglycosylase YP_005046762.1 2578906 R 720554 CDS YP_005046763.1 374296572 11562664 2579350..2580042 1 NC_016627.1 hypothetical protein 2580042 11562664 Clocl_2248 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046763.1 2579350 D 720554 CDS YP_005046764.1 374296573 11562665 complement(2580107..2581813) 1 NC_016627.1 PFAM: GGDEF domain; GAF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 2581813 11562665 Clocl_2249 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005046764.1 2580107 R 720554 CDS YP_005046765.1 374296574 11562666 complement(2581877..2584090) 1 NC_016627.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; actin-like ATPase involved in cell division 2584090 11562666 Clocl_2250 Clostridium clariflavum DSM 19732 actin-like ATPase involved in cell division YP_005046765.1 2581877 R 720554 CDS YP_005046766.1 374296575 11562667 complement(2584146..2584790) 1 NC_016627.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease III, DNA-(apurinic or apyrimidinic site) lyase 2584790 11562667 Clocl_2251 Clostridium clariflavum DSM 19732 endonuclease III, DNA-(apurinic or apyrimidinic site) lyase YP_005046766.1 2584146 R 720554 CDS YP_005046767.1 374296576 11562668 complement(2584917..2586380) 1 NC_016627.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 2586380 11562668 Clocl_2252 Clostridium clariflavum DSM 19732 glycogen/starch synthase YP_005046767.1 2584917 R 720554 CDS YP_005046768.1 374296577 11562669 complement(2586557..2587981) 1 NC_016627.1 PFAM: HD domain; HD-GYP domain-containing protein 2587981 11562669 Clocl_2253 Clostridium clariflavum DSM 19732 HD-GYP domain-containing protein YP_005046768.1 2586557 R 720554 CDS YP_005046769.1 374296578 11562670 complement(2588309..2589757) 1 NC_016627.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); trypsin-like serine protease with C-terminal PDZ domain 2589757 11562670 Clocl_2254 Clostridium clariflavum DSM 19732 trypsin-like serine protease with C-terminal PDZ domain YP_005046769.1 2588309 R 720554 CDS YP_005046770.1 374296579 11562671 complement(2589883..2591400) 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 2591400 11562671 Clocl_2255 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005046770.1 2589883 R 720554 CDS YP_005046771.1 374296580 11562672 complement(2591400..2592086) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 2592086 11562672 Clocl_2256 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005046771.1 2591400 R 720554 CDS YP_005046772.1 374296581 11562673 complement(2592287..2592475) 1 NC_016627.1 hypothetical protein 2592475 11562673 Clocl_2257 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046772.1 2592287 R 720554 CDS YP_005046773.1 374296582 11562674 2592889..2593218 1 NC_016627.1 hypothetical protein 2593218 11562674 Clocl_2258 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046773.1 2592889 D 720554 CDS YP_005046774.1 374296583 11562675 complement(2593242..2594102) 1 NC_016627.1 PFAM: Amidohydrolase; putative TIM-barrel fold metal-dependent hydrolase 2594102 11562675 Clocl_2259 Clostridium clariflavum DSM 19732 putative TIM-barrel fold metal-dependent hydrolase YP_005046774.1 2593242 R 720554 CDS YP_005046775.1 374296584 11562676 2594293..2595501 1 NC_016627.1 PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase; homoserine kinase 2595501 11562676 Clocl_2260 Clostridium clariflavum DSM 19732 homoserine kinase YP_005046775.1 2594293 D 720554 CDS YP_005046776.1 374296585 11562677 complement(2595634..2596641) 1 NC_016627.1 PFAM: HD domain; HD-GYP domain-containing protein 2596641 11562677 Clocl_2261 Clostridium clariflavum DSM 19732 HD-GYP domain-containing protein YP_005046776.1 2595634 R 720554 CDS YP_005046777.1 374296586 11562678 2596850..2597614 1 NC_016627.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain; putative transcriptional regulator 2597614 11562678 Clocl_2262 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005046777.1 2596850 D 720554 CDS YP_005046778.1 374296587 11562679 complement(2597709..2598326) 1 NC_016627.1 PFAM: Uncharacterised ACR, COG2135; hypothetical protein 2598326 11562679 Clocl_2263 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046778.1 2597709 R 720554 CDS YP_005046779.1 374296588 11562680 complement(2598357..2598593) 1 NC_016627.1 hypothetical protein 2598593 11562680 Clocl_2264 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046779.1 2598357 R 720554 CDS YP_005046780.1 374296589 11562681 complement(2598735..2599976) 1 NC_016627.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; nucleotidyltransferase/DNA polymerase involved in DNA repair 2599976 11562681 Clocl_2265 Clostridium clariflavum DSM 19732 nucleotidyltransferase/DNA polymerase involved in DNA repair YP_005046780.1 2598735 R 720554 CDS YP_005046781.1 374296590 11562682 complement(2600148..2601053) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2601053 11562682 Clocl_2266 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005046781.1 2600148 R 720554 CDS YP_005046782.1 374296591 11562687 complement(2607622..2609247) 1 NC_016627.1 PFAM: Mycoplasma protein of unknown function, DUF285; Dockerin type I repeat; hypothetical protein 2609247 11562687 Clocl_2271 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046782.1 2607622 R 720554 CDS YP_005046783.1 374296592 11562688 complement(2609281..2609379) 1 NC_016627.1 hypothetical protein 2609379 11562688 Clocl_2272 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046783.1 2609281 R 720554 CDS YP_005046784.1 374296593 11562689 complement(2609816..2610640) 1 NC_016627.1 PFAM: ABC transporter; manually curated; amino acid ABC transporter ATP-binding protein 2610640 11562689 Clocl_2273 Clostridium clariflavum DSM 19732 amino acid ABC transporter ATP-binding protein YP_005046784.1 2609816 R 720554 CDS YP_005046785.1 374296594 11562690 complement(2610624..2611334) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter 2611334 11562690 Clocl_2274 Clostridium clariflavum DSM 19732 amino acid ABC transporter YP_005046785.1 2610624 R 720554 CDS YP_005046786.1 374296595 11562691 complement(2611407..2612258) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein 2612258 11562691 Clocl_2275 Clostridium clariflavum DSM 19732 amino acid ABC transporter substrate-binding protein YP_005046786.1 2611407 R 720554 CDS YP_005046787.1 374296596 11562692 complement(2612753..2613619) 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 2613619 11562692 Clocl_2276 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046787.1 2612753 R 720554 CDS YP_005046788.1 374296597 11562693 complement(2613720..2615264) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 2615264 11562693 Clocl_2277 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005046788.1 2613720 R 720554 CDS YP_005046789.1 374296598 11562694 complement(2615586..2616518) 1 NC_016627.1 PFAM: CAAX amino terminal protease family; CAAX amino terminal protease 2616518 11562694 Clocl_2278 Clostridium clariflavum DSM 19732 CAAX amino terminal protease YP_005046789.1 2615586 R 720554 CDS YP_005046790.1 374296599 11562695 complement(2616583..2617164) 1 NC_016627.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 2617164 11562695 Clocl_2279 Clostridium clariflavum DSM 19732 5-formyltetrahydrofolate cyclo-ligase YP_005046790.1 2616583 R 720554 CDS YP_005046791.1 374296600 11562696 complement(2617166..2617837) 1 NC_016627.1 PFAM: Predicted membrane protein (DUF2085); hypothetical protein 2617837 11562696 Clocl_2280 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046791.1 2617166 R 720554 CDS YP_005046792.1 374296601 11562697 complement(2617842..2618552) 1 NC_016627.1 hypothetical protein 2618552 11562697 Clocl_2281 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046792.1 2617842 R 720554 CDS YP_005046793.1 374296602 11562698 complement(2618854..2619162) 1 NC_016627.1 PFAM: Ribosomal L25p family; 50S ribosomal protein L25 (general stress protein Ctc) 2619162 11562698 Clocl_2282 Clostridium clariflavum DSM 19732 50S ribosomal protein L25 (general stress protein Ctc) YP_005046793.1 2618854 R 720554 CDS YP_005046794.1 374296603 11562699 complement(2619235..2619540) 1 NC_016627.1 hypothetical protein 2619540 11562699 Clocl_2283 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046794.1 2619235 R 720554 CDS YP_005046795.1 374296604 11562700 2619861..2620823 1 NC_016627.1 manually curated; hypothetical protein 2620823 11562700 Clocl_2284 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046795.1 2619861 D 720554 CDS YP_005046796.1 374296605 11562701 complement(2620948..2621394) 1 NC_016627.1 PFAM: Domain of unknown function (DUF2383); hypothetical protein 2621394 11562701 Clocl_2285 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046796.1 2620948 R 720554 CDS YP_005046797.1 374296606 11562702 2621745..2622992 1 NC_016627.1 PFAM: Protein of unknown function (DUF795); putative nucleotidyltransferase 2622992 11562702 Clocl_2286 Clostridium clariflavum DSM 19732 putative nucleotidyltransferase YP_005046797.1 2621745 D 720554 CDS YP_005046798.1 374296607 11562703 complement(2623165..2624832) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; hypothetical protein 2624832 11562703 Clocl_2287 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046798.1 2623165 R 720554 CDS YP_005046799.1 374296608 11562704 complement(2625482..2626705) 1 NC_016627.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; glycosyltransferase 2626705 11562704 Clocl_2288 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005046799.1 2625482 R 720554 CDS YP_005046800.1 374296609 11562705 complement(2627047..2628423) 1 NC_016627.1 PFAM: PhoH-like protein; PhoH family protein 2628423 11562705 Clocl_2289 Clostridium clariflavum DSM 19732 PhoH family protein YP_005046800.1 2627047 R 720554 CDS YP_005046801.1 374296610 11562706 complement(2628846..2629193) 1 NC_016627.1 PFAM: Cupin domain; mannose-6-phosphate isomerase 2629193 11562706 Clocl_2290 Clostridium clariflavum DSM 19732 mannose-6-phosphate isomerase YP_005046801.1 2628846 R 720554 CDS YP_005046802.1 374296611 11562707 2629489..2629896 1 NC_016627.1 hypothetical protein 2629896 11562707 Clocl_2291 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046802.1 2629489 D 720554 CDS YP_005046803.1 374296612 11562708 complement(2630186..2631064) 1 NC_016627.1 PFAM: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; TIGRFAM: nitrogenase iron protein; nitrogenase iron protein 2631064 11562708 Clocl_2292 Clostridium clariflavum DSM 19732 nitrogenase iron protein YP_005046803.1 2630186 R 720554 CDS YP_005046804.1 374296613 11562709 complement(2631360..2633159) 1 NC_016627.1 PFAM: Cytochrome C biogenesis protein transmembrane region; hypothetical protein 2633159 11562709 Clocl_2293 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046804.1 2631360 R 720554 CDS YP_005046805.1 374296614 11562710 complement(2633213..2634133) 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 2634133 11562710 Clocl_2294 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005046805.1 2633213 R 720554 CDS YP_005046806.1 374296615 11562711 complement(2634292..2634873) 1 NC_016627.1 PFAM: NADPH-dependent FMN reductase; multimeric flavodoxin WrbA 2634873 11562711 Clocl_2295 Clostridium clariflavum DSM 19732 multimeric flavodoxin WrbA YP_005046806.1 2634292 R 720554 CDS YP_005046807.1 374296616 11562712 complement(2634877..2637210) 1 NC_016627.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper/silver-translocating P-type ATPase 2637210 11562712 Clocl_2296 Clostridium clariflavum DSM 19732 copper/silver-translocating P-type ATPase YP_005046807.1 2634877 R 720554 CDS YP_005046808.1 374296617 11562713 complement(2637226..2638107) 1 NC_016627.1 PFAM: ABC transporter; nitrate/sulfonate/bicarbonate ABC transporter ATPase 2638107 11562713 Clocl_2297 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_005046808.1 2637226 R 720554 CDS YP_005046809.1 374296618 11562714 complement(2638180..2639220) 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2639220 11562714 Clocl_2298 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005046809.1 2638180 R 720554 CDS YP_005046810.1 374296619 11562715 complement(2639309..2640169) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 2640169 11562715 Clocl_2299 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046810.1 2639309 R 720554 CDS YP_005046811.1 374296620 11562716 complement(2640153..2640938) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 2640938 11562716 Clocl_2300 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005046811.1 2640153 R 720554 CDS YP_005046812.1 374296621 11562717 complement(2640969..2642480) 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains 2642480 11562717 Clocl_2301 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005046812.1 2640969 R 720554 CDS YP_005046813.1 374296622 11562718 complement(2642492..2643832) 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains 2643832 11562718 Clocl_2302 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005046813.1 2642492 R 720554 CDS YP_005046814.1 374296623 11562719 complement(2643875..2644954) 1 NC_016627.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; uroporphyrinogen-III decarboxylase 2644954 11562719 Clocl_2303 Clostridium clariflavum DSM 19732 uroporphyrinogen-III decarboxylase YP_005046814.1 2643875 R 720554 CDS YP_005046815.1 374296624 11562720 complement(2645238..2645909) 1 NC_016627.1 PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain; putative cobalamin binding protein 2645909 11562720 Clocl_2304 Clostridium clariflavum DSM 19732 putative cobalamin binding protein YP_005046815.1 2645238 R 720554 CDS YP_005046816.1 374296625 11562721 complement(2645952..2646887) 1 NC_016627.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase A 2646887 11562721 Clocl_2305 Clostridium clariflavum DSM 19732 cysteine synthase A YP_005046816.1 2645952 R 720554 CDS YP_005046817.1 374296626 11562722 complement(2647026..2647592) 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase 2647592 11562722 Clocl_2306 Clostridium clariflavum DSM 19732 nitroreductase YP_005046817.1 2647026 R 720554 CDS YP_005046818.1 374296627 11562723 complement(2647624..2649336) 1 NC_016627.1 PFAM: Radical SAM superfamily; Dinitrogenase iron-molybdenum cofactor; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 2649336 11562723 Clocl_2307 Clostridium clariflavum DSM 19732 nitrogenase cofactor biosynthesis protein NifB YP_005046818.1 2647624 R 720554 CDS YP_005046819.1 374296628 11562724 complement(2649710..2650516) 1 NC_016627.1 hypothetical protein 2650516 11562724 Clocl_2308 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046819.1 2649710 R 720554 CDS YP_005046820.1 374296629 11562725 2650897..2651694 1 NC_016627.1 PFAM: Prolyl oligopeptidase family; prolyl oligopeptidase family protein 2651694 11562725 Clocl_2309 Clostridium clariflavum DSM 19732 prolyl oligopeptidase family protein YP_005046820.1 2650897 D 720554 CDS YP_005046821.1 374296630 11562726 2651715..2651984 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325); hypothetical protein 2651984 11562726 Clocl_2310 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046821.1 2651715 D 720554 CDS YP_005046822.1 374296631 11562727 complement(2652270..2653487) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 2653487 11562727 Clocl_2311 Clostridium clariflavum DSM 19732 transposase YP_005046822.1 2652270 R 720554 CDS YP_005046823.1 374296632 11562728 complement(2653625..2653909) 1 NC_016627.1 hypothetical protein 2653909 11562728 Clocl_2312 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046823.1 2653625 R 720554 CDS YP_005046824.1 374296633 11562729 complement(2653906..2655510) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 2655510 11562729 Clocl_2313 Clostridium clariflavum DSM 19732 transposase YP_005046824.1 2653906 R 720554 CDS YP_005046825.1 374296634 11562730 complement(2656063..2656833) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 2656833 11562730 Clocl_2314 Clostridium clariflavum DSM 19732 DNA replication protein YP_005046825.1 2656063 R 720554 CDS YP_005046826.1 374296635 11562731 complement(2656850..2658316) 1 NC_016627.1 PFAM: Sugar-specific transcriptional regulator TrmB; Integrase core domain; transposase 2658316 11562731 Clocl_2315 Clostridium clariflavum DSM 19732 transposase YP_005046826.1 2656850 R 720554 CDS YP_005046827.1 374296636 11562732 complement(2658419..2658655) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 2658655 11562732 Clocl_2316 Clostridium clariflavum DSM 19732 transposase YP_005046827.1 2658419 R 720554 CDS YP_005046828.1 374296637 11562733 complement(2658652..2659005) 1 NC_016627.1 PFAM: Transposase; Transposase 2659005 11562733 Clocl_2317 Clostridium clariflavum DSM 19732 Transposase YP_005046828.1 2658652 R 720554 CDS YP_005046829.1 374296638 11562734 complement(2659321..2659803) 1 NC_016627.1 hypothetical protein 2659803 11562734 Clocl_2318 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046829.1 2659321 R 720554 CDS YP_005046830.1 374296639 11562735 complement(2659821..2660036) 1 NC_016627.1 hypothetical protein 2660036 11562735 Clocl_2319 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046830.1 2659821 R 720554 CDS YP_005046831.1 374296640 11562736 complement(2660393..2661673) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; manually curated; transposase 2661673 11562736 Clocl_2320 Clostridium clariflavum DSM 19732 transposase YP_005046831.1 2660393 R 720554 CDS YP_005046832.1 374296641 11562737 complement(2661983..2662438) 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 2662438 11562737 Clocl_2321 Clostridium clariflavum DSM 19732 transposase YP_005046832.1 2661983 R 720554 CDS YP_005046833.1 374296642 11562738 2662845..2663114 1 NC_016627.1 PFAM: HSP20-like domain of unknown function (DUF1813); hypothetical protein 2663114 11562738 Clocl_2322 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046833.1 2662845 D 720554 CDS YP_005046834.1 374296643 11562740 2663752..2663958 1 NC_016627.1 hypothetical protein 2663958 11562740 Clocl_2324 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046834.1 2663752 D 720554 CDS YP_005046835.1 374296644 11562741 complement(2664096..2664401) 1 NC_016627.1 hypothetical protein 2664401 11562741 Clocl_2325 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046835.1 2664096 R 720554 CDS YP_005046836.1 374296645 11562743 complement(2666913..2667689) 1 NC_016627.1 hypothetical protein 2667689 11562743 Clocl_2327 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046836.1 2666913 R 720554 CDS YP_005046837.1 374296646 11562744 complement(join(2667918..2668574,2668576..2669526)) 1 NC_016627.1 PFAM: Transposase IS66 family; manually curated; transposase 2669526 11562744 Clocl_2328 Clostridium clariflavum DSM 19732 transposase YP_005046837.1 2667918 R 720554 CDS YP_005046838.1 374296647 11562745 complement(2669591..2669944) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 2669944 11562745 Clocl_2329 Clostridium clariflavum DSM 19732 transposase YP_005046838.1 2669591 R 720554 CDS YP_005046839.1 374296648 11562746 complement(2670250..2670534) 1 NC_016627.1 hypothetical protein 2670534 11562746 Clocl_2330 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046839.1 2670250 R 720554 CDS YP_005046840.1 374296649 11562747 complement(2670531..2672135) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 2672135 11562747 Clocl_2331 Clostridium clariflavum DSM 19732 transposase YP_005046840.1 2670531 R 720554 CDS YP_005046841.1 374296650 11562748 complement(2672200..2672553) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 2672553 11562748 Clocl_2332 Clostridium clariflavum DSM 19732 transposase YP_005046841.1 2672200 R 720554 CDS YP_005046842.1 374296651 11562749 complement(2672550..2672903) 1 NC_016627.1 PFAM: Transposase; Transposase 2672903 11562749 Clocl_2333 Clostridium clariflavum DSM 19732 Transposase YP_005046842.1 2672550 R 720554 CDS YP_005046843.1 374296652 11562750 complement(2672973..2673128) 1 NC_016627.1 hypothetical protein 2673128 11562750 Clocl_2334 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046843.1 2672973 R 720554 CDS YP_005046844.1 374296653 11562751 complement(2673376..2673762) 1 NC_016627.1 hypothetical protein 2673762 11562751 Clocl_2335 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046844.1 2673376 R 720554 CDS YP_005046845.1 374296654 11562753 complement(2679414..2679575) 1 NC_016627.1 hypothetical protein 2679575 11562753 Clocl_2337 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046845.1 2679414 R 720554 CDS YP_005046846.1 374296655 11562754 complement(2679593..2679697) 1 NC_016627.1 hypothetical protein 2679697 11562754 Clocl_2338 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046846.1 2679593 R 720554 CDS YP_005046847.1 374296656 11562756 complement(2681363..2681716) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 2681716 11562756 Clocl_2340 Clostridium clariflavum DSM 19732 transposase YP_005046847.1 2681363 R 720554 CDS YP_005046848.1 374296657 11562757 complement(2681783..2682067) 1 NC_016627.1 PFAM: Transposase; Transposase 2682067 11562757 Clocl_2341 Clostridium clariflavum DSM 19732 Transposase YP_005046848.1 2681783 R 720554 CDS YP_005046849.1 374296658 11562758 complement(2682204..2682599) 1 NC_016627.1 hypothetical protein 2682599 11562758 Clocl_2342 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046849.1 2682204 R 720554 CDS YP_005046850.1 374296659 11562759 complement(2682601..2683362) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); hypothetical protein 2683362 11562759 Clocl_2343 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046850.1 2682601 R 720554 CDS YP_005046851.1 374296660 11562760 complement(2683325..2684650) 1 NC_016627.1 TIGRFAM: intein N-terminal splicing region; RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 2684650 11562760 Clocl_2344 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005046851.1 2683325 R 720554 CDS YP_005046852.1 374296661 11562761 complement(2685070..2685723) 1 NC_016627.1 PFAM: Suppressor of fused protein (SUFU); Suppressor of fused protein (SUFU) 2685723 11562761 Clocl_2345 Clostridium clariflavum DSM 19732 Suppressor of fused protein (SUFU) YP_005046852.1 2685070 R 720554 CDS YP_005046853.1 374296662 11562762 complement(join(2685921..2686511,2686511..2687311)) 1 NC_016627.1 PFAM: Transposase DDE domain; manually curated; transposase family protein 2687311 11562762 Clocl_2346 Clostridium clariflavum DSM 19732 transposase family protein YP_005046853.1 2685921 R 720554 CDS YP_005046854.1 374296663 11562763 complement(2687487..2687975) 1 NC_016627.1 hypothetical protein 2687975 11562763 Clocl_2347 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046854.1 2687487 R 720554 CDS YP_005046855.1 374296664 11562764 complement(2688386..2688520) 1 NC_016627.1 hypothetical protein 2688520 11562764 Clocl_2348 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046855.1 2688386 R 720554 CDS YP_005046856.1 374296665 11562765 complement(2688517..2690124) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 2690124 11562765 Clocl_2349 Clostridium clariflavum DSM 19732 transposase YP_005046856.1 2688517 R 720554 CDS YP_005046857.1 374296666 11562766 complement(2690189..2690542) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 2690542 11562766 Clocl_2350 Clostridium clariflavum DSM 19732 transposase YP_005046857.1 2690189 R 720554 CDS YP_005046858.1 374296667 11562767 complement(2690539..2690892) 1 NC_016627.1 PFAM: Transposase; Transposase 2690892 11562767 Clocl_2351 Clostridium clariflavum DSM 19732 Transposase YP_005046858.1 2690539 R 720554 CDS YP_005046859.1 374296668 11562768 complement(2691262..2691603) 1 NC_016627.1 hypothetical protein 2691603 11562768 Clocl_2352 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046859.1 2691262 R 720554 CDS YP_005046860.1 374296669 11562769 complement(2691614..2693710) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; intein N-terminal splicing region; YD repeat (two copies); RHS repeat-associated core domain-containing protein 2693710 11562769 Clocl_2353 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005046860.1 2691614 R 720554 CDS YP_005046861.1 374296670 11562770 complement(2693827..2701137) 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); RHS Repeat; Dockerin type I repeat; Bacterial SH3 domain; TIGRFAM: YD repeat (two copies); Rhs family protein 2701137 11562770 Clocl_2354 Clostridium clariflavum DSM 19732 Rhs family protein YP_005046861.1 2693827 R 720554 CDS YP_005046862.1 374296671 11562771 2701545..2701760 1 NC_016627.1 PFAM: Transposase, Mutator family; Transposase, Mutator family 2701760 11562771 Clocl_2355 Clostridium clariflavum DSM 19732 Transposase, Mutator family YP_005046862.1 2701545 D 720554 CDS YP_005046863.1 374296672 11562772 complement(2701818..2702234) 1 NC_016627.1 PFAM: SMI1 / KNR4 family; putative glucan synthasis protein 2702234 11562772 Clocl_2356 Clostridium clariflavum DSM 19732 putative glucan synthasis protein YP_005046863.1 2701818 R 720554 CDS YP_005046864.1 374296673 11562776 complement(2705239..2706732) 1 NC_016627.1 PFAM: Integrase core domain; transposase 2706732 11562776 Clocl_2360 Clostridium clariflavum DSM 19732 transposase YP_005046864.1 2705239 R 720554 CDS YP_005046865.1 374296674 11562777 complement(2707361..2708869) 1 NC_016627.1 hypothetical protein 2708869 11562777 Clocl_2361 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046865.1 2707361 R 720554 CDS YP_005046866.1 374296675 11562778 complement(2708883..2709407) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2709407 11562778 Clocl_2362 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005046866.1 2708883 R 720554 CDS YP_005046867.1 374296676 11562779 complement(2709539..2710069) 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 2710069 11562779 Clocl_2363 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005046867.1 2709539 R 720554 CDS YP_005046868.1 374296677 11562780 complement(2710129..2711076) 1 NC_016627.1 hypothetical protein 2711076 11562780 Clocl_2364 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046868.1 2710129 R 720554 CDS YP_005046869.1 374296678 11562782 complement(2712034..2712792) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 2712792 11562782 Clocl_2366 Clostridium clariflavum DSM 19732 DNA replication protein YP_005046869.1 2712034 R 720554 CDS YP_005046870.1 374296679 11562783 complement(2712770..2714335) 1 NC_016627.1 PFAM: Integrase core domain; transposase 2714335 11562783 Clocl_2367 Clostridium clariflavum DSM 19732 transposase YP_005046870.1 2712770 R 720554 CDS YP_005046871.1 374296680 11562784 complement(2714634..2714780) 1 NC_016627.1 hypothetical protein 2714780 11562784 Clocl_2368 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046871.1 2714634 R 720554 CDS YP_005046872.1 374296681 11562787 complement(2715869..2716084) 1 NC_016627.1 hypothetical protein 2716084 11562787 Clocl_2371 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046872.1 2715869 R 720554 CDS YP_005046873.1 374296682 11562788 complement(2716927..2717187) 1 NC_016627.1 PFAM: Stage V sporulation protein S (SpoVS); hypothetical protein 2717187 11562788 Clocl_2372 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046873.1 2716927 R 720554 CDS YP_005046874.1 374296683 11562789 complement(2717499..2717915) 1 NC_016627.1 manually curated; hypothetical protein 2717915 11562789 Clocl_2373 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046874.1 2717499 R 720554 CDS YP_005046875.1 374296684 11562790 complement(2718096..2719106) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; TIGR01210 family protein; histone acetyltransferase 2719106 11562790 Clocl_2374 Clostridium clariflavum DSM 19732 histone acetyltransferase YP_005046875.1 2718096 R 720554 CDS YP_005046876.1 374296685 11562791 complement(2719153..2719860) 1 NC_016627.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial; ribonuclease III 2719860 11562791 Clocl_2375 Clostridium clariflavum DSM 19732 ribonuclease III YP_005046876.1 2719153 R 720554 CDS YP_005046877.1 374296686 11562792 complement(2720110..2721348) 1 NC_016627.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; beta-ketoacyl-acyl-carrier-protein synthase II 2721348 11562792 Clocl_2376 Clostridium clariflavum DSM 19732 beta-ketoacyl-acyl-carrier-protein synthase II YP_005046877.1 2720110 R 720554 CDS YP_005046878.1 374296687 11562793 complement(2721515..2721739) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 2721739 11562793 Clocl_2377 Clostridium clariflavum DSM 19732 acyl carrier protein YP_005046878.1 2721515 R 720554 CDS YP_005046879.1 374296688 11562794 complement(2721835..2722578) 1 NC_016627.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 2722578 11562794 Clocl_2378 Clostridium clariflavum DSM 19732 3-oxoacyl-(acyl-carrier-protein) reductase YP_005046879.1 2721835 R 720554 CDS YP_005046880.1 374296689 11562795 complement(2722717..2723652) 1 NC_016627.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2723652 11562795 Clocl_2379 Clostridium clariflavum DSM 19732 malonyl CoA-acyl carrier protein transacylase YP_005046880.1 2722717 R 720554 CDS YP_005046881.1 374296690 11562796 complement(2723678..2724673) 1 NC_016627.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2724673 11562796 Clocl_2380 Clostridium clariflavum DSM 19732 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005046881.1 2723678 R 720554 CDS YP_005046882.1 374296691 11562797 complement(2724663..2725676) 1 NC_016627.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; fatty acid/phospholipid synthesis protein PlsX 2725676 11562797 Clocl_2381 Clostridium clariflavum DSM 19732 fatty acid/phospholipid synthesis protein PlsX YP_005046882.1 2724663 R 720554 CDS YP_005046883.1 374296692 11562798 complement(2725745..2726389) 1 NC_016627.1 PFAM: DeoR-like helix-turn-helix domain; sugar metabolism transcriptional regulator 2726389 11562798 Clocl_2382 Clostridium clariflavum DSM 19732 sugar metabolism transcriptional regulator YP_005046883.1 2725745 R 720554 CDS YP_005046884.1 374296693 11562799 complement(2726574..2727191) 1 NC_016627.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2727191 11562799 Clocl_2383 Clostridium clariflavum DSM 19732 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005046884.1 2726574 R 720554 CDS YP_005046885.1 374296694 11562800 complement(2727175..2728533) 1 NC_016627.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; 30S ribosomal protein S12 2728533 11562800 Clocl_2384 Clostridium clariflavum DSM 19732 30S ribosomal protein S12 YP_005046885.1 2727175 R 720554 CDS YP_005046886.1 374296695 11562801 complement(2728715..2728963) 1 NC_016627.1 hypothetical protein 2728963 11562801 Clocl_2385 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046886.1 2728715 R 720554 CDS YP_005046887.1 374296696 11562802 complement(2728963..2730414) 1 NC_016627.1 PFAM: Rad50 zinc hook motif; Rad50 zinc hook motif protein 2730414 11562802 Clocl_2386 Clostridium clariflavum DSM 19732 Rad50 zinc hook motif protein YP_005046887.1 2728963 R 720554 CDS YP_005046888.1 374296697 11562803 complement(2730411..2731400) 1 NC_016627.1 PFAM: Calcineurin-like phosphoesterase; DNA repair exonuclease 2731400 11562803 Clocl_2387 Clostridium clariflavum DSM 19732 DNA repair exonuclease YP_005046888.1 2730411 R 720554 CDS YP_005046889.1 374296698 11562804 complement(2731407..2732099) 1 NC_016627.1 PFAM: Phosphoglycerate mutase family; fructose-2,6-bisphosphatase 2732099 11562804 Clocl_2388 Clostridium clariflavum DSM 19732 fructose-2,6-bisphosphatase YP_005046889.1 2731407 R 720554 CDS YP_005046890.1 374296699 11562805 complement(2732128..2733051) 1 NC_016627.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; dihydroorotate dehydrogenase family protein 2733051 11562805 Clocl_2389 Clostridium clariflavum DSM 19732 dihydroorotate dehydrogenase family protein YP_005046890.1 2732128 R 720554 CDS YP_005046891.1 374296700 11562806 complement(2733044..2733829) 1 NC_016627.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; 2-polyprenylphenol 6-hydroxylase 2733829 11562806 Clocl_2390 Clostridium clariflavum DSM 19732 2-polyprenylphenol 6-hydroxylase YP_005046891.1 2733044 R 720554 CDS YP_005046892.1 374296701 11562807 complement(2733958..2737173) 1 NC_016627.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 2737173 11562807 Clocl_2391 Clostridium clariflavum DSM 19732 carbamoyl-phosphate synthase large subunit YP_005046892.1 2733958 R 720554 CDS YP_005046893.1 374296702 11562808 complement(2737316..2738389) 1 NC_016627.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 2738389 11562808 Clocl_2392 Clostridium clariflavum DSM 19732 carbamoyl-phosphate synthase small subunit YP_005046893.1 2737316 R 720554 CDS YP_005046894.1 374296703 11562809 complement(2738423..2739361) 1 NC_016627.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; orotidine 5''-phosphate decarboxylase 2739361 11562809 Clocl_2393 Clostridium clariflavum DSM 19732 orotidine 5''-phosphate decarboxylase YP_005046894.1 2738423 R 720554 CDS YP_005046895.1 374296704 11562810 complement(2739449..2740735) 1 NC_016627.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase 2740735 11562810 Clocl_2394 Clostridium clariflavum DSM 19732 dihydroorotase YP_005046895.1 2739449 R 720554 CDS YP_005046896.1 374296705 11562811 complement(2740719..2741657) 1 NC_016627.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 2741657 11562811 Clocl_2395 Clostridium clariflavum DSM 19732 aspartate carbamoyltransferase YP_005046896.1 2740719 R 720554 CDS YP_005046897.1 374296706 11562812 complement(2741771..2741947) 1 NC_016627.1 hypothetical protein 2741947 11562812 Clocl_2396 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046897.1 2741771 R 720554 CDS YP_005046898.1 374296707 11562813 complement(2742020..2742574) 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 2742574 11562813 Clocl_2397 Clostridium clariflavum DSM 19732 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase YP_005046898.1 2742020 R 720554 CDS YP_005046899.1 374296708 11562814 complement(2742853..2743287) 1 NC_016627.1 TIGRFAM: putative membrane protein, TIGR04086 family; integral membrane protein, TIGR04097 family; hypothetical protein 2743287 11562814 Clocl_2398 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046899.1 2742853 R 720554 CDS YP_005046900.1 374296709 11562815 complement(2743380..2743547) 1 NC_016627.1 hypothetical protein 2743547 11562815 Clocl_2399 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046900.1 2743380 R 720554 CDS YP_005046901.1 374296710 11562816 2743733..2745883 1 NC_016627.1 PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 2745883 11562816 Clocl_2400 Clostridium clariflavum DSM 19732 Peptidase propeptide domain-containing protein YP_005046901.1 2743733 D 720554 CDS YP_005046902.1 374296711 11562817 2746058..2746525 1 NC_016627.1 hypothetical protein 2746525 11562817 Clocl_2401 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046902.1 2746058 D 720554 CDS YP_005046903.1 374296712 11562818 complement(2746611..2746898) 1 NC_016627.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC 2746898 11562818 Clocl_2402 Clostridium clariflavum DSM 19732 preprotein translocase subunit YajC YP_005046903.1 2746611 R 720554 CDS YP_005046904.1 374296713 11562819 complement(2746928..2748046) 1 NC_016627.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 2748046 11562819 Clocl_2403 Clostridium clariflavum DSM 19732 tRNA-guanine transglycosylase YP_005046904.1 2746928 R 720554 CDS YP_005046905.1 374296714 11562820 complement(2748103..2749128) 1 NC_016627.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2749128 11562820 Clocl_2404 Clostridium clariflavum DSM 19732 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_005046905.1 2748103 R 720554 CDS YP_005046906.1 374296715 11562821 complement(2749436..2751073) 1 NC_016627.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; SpoIID/LytB domain-containing protein 2751073 11562821 Clocl_2405 Clostridium clariflavum DSM 19732 SpoIID/LytB domain-containing protein YP_005046906.1 2749436 R 720554 CDS YP_005046907.1 374296716 11562822 2751697..2752578 1 NC_016627.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 2752578 11562822 Clocl_2406 Clostridium clariflavum DSM 19732 dihydrodipicolinate synthase YP_005046907.1 2751697 D 720554 CDS YP_005046908.1 374296717 11562823 2752645..2753409 1 NC_016627.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 2753409 11562823 Clocl_2407 Clostridium clariflavum DSM 19732 dihydrodipicolinate reductase YP_005046908.1 2752645 D 720554 CDS YP_005046909.1 374296718 11562824 2753560..2754033 1 NC_016627.1 PFAM: ACT domain; aspartokinase 2754033 11562824 Clocl_2408 Clostridium clariflavum DSM 19732 aspartokinase YP_005046909.1 2753560 D 720554 CDS YP_005046910.1 374296719 11562825 complement(2754086..2754616) 1 NC_016627.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; ATP:corrinoid adenosyltransferase 2754616 11562825 Clocl_2409 Clostridium clariflavum DSM 19732 ATP:corrinoid adenosyltransferase YP_005046910.1 2754086 R 720554 CDS YP_005046911.1 374296720 11562827 complement(2755068..2755796) 1 NC_016627.1 PFAM: Sir2 family; NAD-dependent protein deacetylase, SIR2 family 2755796 11562827 Clocl_2411 Clostridium clariflavum DSM 19732 NAD-dependent protein deacetylase, SIR2 family YP_005046911.1 2755068 R 720554 CDS YP_005046912.1 374296721 11562828 complement(2755853..2756248) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1696); hypothetical protein 2756248 11562828 Clocl_2412 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046912.1 2755853 R 720554 CDS YP_005046913.1 374296722 11562829 complement(2756494..2758119) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter ATPase 2758119 11562829 Clocl_2413 Clostridium clariflavum DSM 19732 ABC transporter ATPase YP_005046913.1 2756494 R 720554 CDS YP_005046914.1 374296723 11562831 complement(join(2760652..2761656,2761656..2761868)) 1 NC_016627.1 PFAM: Transposase, Mutator family; manually curated; transposase 2761868 11562831 Clocl_2415 Clostridium clariflavum DSM 19732 transposase YP_005046914.1 2760652 R 720554 CDS YP_005046915.1 374296724 11562832 complement(2762692..2763837) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 2763837 11562832 Clocl_2416 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005046915.1 2762692 R 720554 CDS YP_005046916.1 374296725 11562833 2764264..2765004 1 NC_016627.1 hypothetical protein 2765004 11562833 Clocl_2417 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046916.1 2764264 D 720554 CDS YP_005046917.1 374296726 11562834 2765153..2766856 1 NC_016627.1 PFAM: von Willebrand factor type A domain; manually curated; hypothetical protein 2766856 11562834 Clocl_2418 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046917.1 2765153 D 720554 CDS YP_005046918.1 374296727 11562835 complement(2767208..2767576) 1 NC_016627.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine enolpyruvyl transferase 2767576 11562835 Clocl_2419 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005046918.1 2767208 R 720554 CDS YP_005046919.1 374296728 11562836 complement(2767990..2769087) 1 NC_016627.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 2769087 11562836 Clocl_2420 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_005046919.1 2767990 R 720554 CDS YP_005046920.1 374296729 11562837 complement(2769100..2770245) 1 NC_016627.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW; manually curated; cell division protein FtsW 2770245 11562837 Clocl_2421 Clostridium clariflavum DSM 19732 cell division protein FtsW YP_005046920.1 2769100 R 720554 CDS YP_005046921.1 374296730 11562838 complement(2770312..2771304) 1 NC_016627.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; Phospho-N-acetylmuramoyl-pentapeptide- transferase 2771304 11562838 Clocl_2422 Clostridium clariflavum DSM 19732 Phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005046921.1 2770312 R 720554 CDS YP_005046922.1 374296731 11562839 complement(2771379..2772761) 1 NC_016627.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 2772761 11562839 Clocl_2423 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_005046922.1 2771379 R 720554 CDS YP_005046923.1 374296732 11562840 complement(2772812..2774266) 1 NC_016627.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase 2774266 11562840 Clocl_2424 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramyl tripeptide synthetase YP_005046923.1 2772812 R 720554 CDS YP_005046924.1 374296733 11562841 complement(2774348..2776540) 1 NC_016627.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D; manually curated; cell division protein FtsI/penicillin-binding protein 2 2776540 11562841 Clocl_2425 Clostridium clariflavum DSM 19732 cell division protein FtsI/penicillin-binding protein 2 YP_005046924.1 2774348 R 720554 CDS YP_005046925.1 374296734 11562842 complement(2776892..2777383) 1 NC_016627.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL; Cell division protein FtsL 2777383 11562842 Clocl_2426 Clostridium clariflavum DSM 19732 Cell division protein FtsL YP_005046925.1 2776892 R 720554 CDS YP_005046926.1 374296735 11562843 complement(2777936..2778877) 1 NC_016627.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 2778877 11562843 Clocl_2427 Clostridium clariflavum DSM 19732 S-adenosyl-methyltransferase MraW YP_005046926.1 2777936 R 720554 CDS YP_005046927.1 374296736 11562844 complement(2778940..2779371) 1 NC_016627.1 PFAM: MraZ protein; TIGRFAM: mraZ protein; mraZ protein 2779371 11562844 Clocl_2428 Clostridium clariflavum DSM 19732 mraZ protein YP_005046927.1 2778940 R 720554 CDS YP_005046928.1 374296737 11562845 complement(2779569..2780702) 1 NC_016627.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; rod shape-determining protein RodA 2780702 11562845 Clocl_2429 Clostridium clariflavum DSM 19732 rod shape-determining protein RodA YP_005046928.1 2779569 R 720554 CDS YP_005046929.1 374296738 11562846 complement(2780990..2781172) 1 NC_016627.1 hypothetical protein 2781172 11562846 Clocl_2430 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046929.1 2780990 R 720554 CDS YP_005046930.1 374296739 11562847 complement(2781360..2782343) 1 NC_016627.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2782343 11562847 Clocl_2431 Clostridium clariflavum DSM 19732 prolipoprotein diacylglyceryl transferase YP_005046930.1 2781360 R 720554 CDS YP_005046931.1 374296740 11562848 complement(2782356..2783639) 1 NC_016627.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); putative Zn-dependent peptidase 2783639 11562848 Clocl_2432 Clostridium clariflavum DSM 19732 putative Zn-dependent peptidase YP_005046931.1 2782356 R 720554 CDS YP_005046932.1 374296741 11562849 complement(2783769..2785058) 1 NC_016627.1 PFAM: Peptidase M16 inactive domain; putative Zn-dependent peptidase 2785058 11562849 Clocl_2433 Clostridium clariflavum DSM 19732 putative Zn-dependent peptidase YP_005046932.1 2783769 R 720554 CDS YP_005046933.1 374296742 11562850 complement(2785564..2787237) 1 NC_016627.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated; diguanylate cyclase domain-containing protein 2787237 11562850 Clocl_2434 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005046933.1 2785564 R 720554 CDS YP_005046934.1 374296743 11562851 complement(2787659..2793643) 1 NC_016627.1 PFAM: Bacterial Ig-like domain (group 2); Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); beta-1,4-xylanase 2793643 11562851 Clocl_2435 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005046934.1 2787659 R 720554 CDS YP_005046935.1 374296744 11562852 complement(2794217..2795221) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 2795221 11562852 Clocl_2436 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005046935.1 2794217 R 720554 CDS YP_005046936.1 374296745 11562853 complement(2795742..2797385) 1 NC_016627.1 PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Glycosyl hydrolases family 43; beta-xylosidase 2797385 11562853 Clocl_2437 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005046936.1 2795742 R 720554 CDS YP_005046937.1 374296746 11562854 complement(2797716..2798654) 1 NC_016627.1 PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; lysophospholipase L1-like esterase 2798654 11562854 Clocl_2438 Clostridium clariflavum DSM 19732 lysophospholipase L1-like esterase YP_005046937.1 2797716 R 720554 CDS YP_005046938.1 374296747 11562855 complement(2798730..2799434) 1 NC_016627.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; ribulose-5-phosphate 4-epimerase-like epimerase or aldolase 2799434 11562855 Clocl_2439 Clostridium clariflavum DSM 19732 ribulose-5-phosphate 4-epimerase-like epimerase or aldolase YP_005046938.1 2798730 R 720554 CDS YP_005046939.1 374296748 11562856 complement(2799453..2801048) 1 NC_016627.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; pentulose/hexulose kinase 2801048 11562856 Clocl_2440 Clostridium clariflavum DSM 19732 pentulose/hexulose kinase YP_005046939.1 2799453 R 720554 CDS YP_005046940.1 374296749 11562857 complement(2801372..2803759) 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; beta-1,4-xylanase 2803759 11562857 Clocl_2441 Clostridium clariflavum DSM 19732 beta-1,4-xylanase YP_005046940.1 2801372 R 720554 CDS YP_005046941.1 374296750 11562858 complement(2804133..2805557) 1 NC_016627.1 PFAM: Glycosyl hydrolases family 43; beta-xylosidase 2805557 11562858 Clocl_2442 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005046941.1 2804133 R 720554 CDS YP_005046942.1 374296751 11562859 complement(2805633..2807141) 1 NC_016627.1 PFAM: Glycosyl hydrolases family 39; beta-xylosidase 2807141 11562859 Clocl_2443 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005046942.1 2805633 R 720554 CDS YP_005046943.1 374296752 11562860 complement(2807205..2807489) 1 NC_016627.1 hypothetical protein 2807489 11562860 Clocl_2444 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046943.1 2807205 R 720554 CDS YP_005046944.1 374296753 11562861 complement(2807554..2809035) 1 NC_016627.1 PFAM: Alpha-L-arabinofuranosidase C-terminus; alpha-L-arabinofuranosidase 2809035 11562861 Clocl_2445 Clostridium clariflavum DSM 19732 alpha-L-arabinofuranosidase YP_005046944.1 2807554 R 720554 CDS YP_005046945.1 374296754 11562862 complement(2809204..2810367) 1 NC_016627.1 PFAM: Beta-lactamase; penicillin-binding protein, beta-lactamase class C 2810367 11562862 Clocl_2446 Clostridium clariflavum DSM 19732 penicillin-binding protein, beta-lactamase class C YP_005046945.1 2809204 R 720554 CDS YP_005046946.1 374296755 11562863 complement(2811117..2812616) 1 NC_016627.1 PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); Putative esterase; enterochelin esterase-like enzyme 2812616 11562863 Clocl_2447 Clostridium clariflavum DSM 19732 enterochelin esterase-like enzyme YP_005046946.1 2811117 R 720554 CDS YP_005046947.1 374296756 11562864 2812897..2813073 1 NC_016627.1 hypothetical protein 2813073 11562864 Clocl_2448 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046947.1 2812897 D 720554 CDS YP_005046948.1 374296757 11562865 complement(2813102..2814037) 1 NC_016627.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin kinase/FMN adenylyltransferase 2814037 11562865 Clocl_2449 Clostridium clariflavum DSM 19732 riboflavin kinase/FMN adenylyltransferase YP_005046948.1 2813102 R 720554 CDS YP_005046949.1 374296758 11562866 complement(2814166..2815053) 1 NC_016627.1 PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 2815053 11562866 Clocl_2450 Clostridium clariflavum DSM 19732 tRNA pseudouridine synthase B YP_005046949.1 2814166 R 720554 CDS YP_005046950.1 374296759 11562867 complement(2815056..2816012) 1 NC_016627.1 PFAM: DHHA1 domain; DHH family; exopolyphosphatase-like protein 2816012 11562867 Clocl_2451 Clostridium clariflavum DSM 19732 exopolyphosphatase-like protein YP_005046950.1 2815056 R 720554 CDS YP_005046951.1 374296760 11562868 complement(2816200..2816547) 1 NC_016627.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A 2816547 11562868 Clocl_2452 Clostridium clariflavum DSM 19732 ribosome-binding factor A YP_005046951.1 2816200 R 720554 CDS YP_005046952.1 374296761 11562869 complement(2816576..2819650) 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; manually curated; translation initiation factor IF-2 2819650 11562869 Clocl_2453 Clostridium clariflavum DSM 19732 translation initiation factor IF-2 YP_005046952.1 2816576 R 720554 CDS YP_005046953.1 374296762 11562870 complement(2819673..2820017) 1 NC_016627.1 PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; ribosomal protein HS6-type (S12/L30/L7a) 2820017 11562870 Clocl_2454 Clostridium clariflavum DSM 19732 ribosomal protein HS6-type (S12/L30/L7a) YP_005046953.1 2819673 R 720554 CDS YP_005046954.1 374296763 11562871 complement(2820007..2820282) 1 NC_016627.1 PFAM: Protein of unknown function (DUF448); manually curated; putative nucleic-acid-binding protein implicated in transcription termination 2820282 11562871 Clocl_2455 Clostridium clariflavum DSM 19732 putative nucleic-acid-binding protein implicated in transcription termination YP_005046954.1 2820007 R 720554 CDS YP_005046955.1 374296764 11562872 complement(2820438..2821571) 1 NC_016627.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA 2821571 11562872 Clocl_2456 Clostridium clariflavum DSM 19732 transcription termination factor NusA YP_005046955.1 2820438 R 720554 CDS YP_005046956.1 374296765 11562873 complement(2821628..2822089) 1 NC_016627.1 PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 2822089 11562873 Clocl_2457 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046956.1 2821628 R 720554 CDS YP_005046957.1 374296766 11562874 complement(2822345..2823409) 1 NC_016627.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 2823409 11562874 Clocl_2458 Clostridium clariflavum DSM 19732 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_005046957.1 2822345 R 720554 CDS YP_005046958.1 374296767 11562875 complement(2823448..2824740) 1 NC_016627.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; RIP metalloprotease RseP 2824740 11562875 Clocl_2459 Clostridium clariflavum DSM 19732 RIP metalloprotease RseP YP_005046958.1 2823448 R 720554 CDS YP_005046959.1 374296768 11562876 complement(2824996..2826141) 1 NC_016627.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2826141 11562876 Clocl_2460 Clostridium clariflavum DSM 19732 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005046959.1 2824996 R 720554 CDS YP_005046960.1 374296769 11562877 complement(2826180..2827019) 1 NC_016627.1 PFAM: Cytidylyltransferase family; manually curated; CDP-diglyceride synthetase 2827019 11562877 Clocl_2461 Clostridium clariflavum DSM 19732 CDP-diglyceride synthetase YP_005046960.1 2826180 R 720554 CDS YP_005046961.1 374296770 11562878 complement(2827021..2827785) 1 NC_016627.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl diphosphate synthase 2827785 11562878 Clocl_2462 Clostridium clariflavum DSM 19732 undecaprenyl diphosphate synthase YP_005046961.1 2827021 R 720554 CDS YP_005046962.1 374296771 11562879 complement(2827939..2828139) 1 NC_016627.1 hypothetical protein 2828139 11562879 Clocl_2463 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046962.1 2827939 R 720554 CDS YP_005046963.1 374296772 11562880 complement(2828141..2828698) 1 NC_016627.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 2828698 11562880 Clocl_2464 Clostridium clariflavum DSM 19732 ribosome recycling factor YP_005046963.1 2828141 R 720554 CDS YP_005046964.1 374296773 11562881 complement(2828844..2829551) 1 NC_016627.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 2829551 11562881 Clocl_2465 Clostridium clariflavum DSM 19732 uridylate kinase YP_005046964.1 2828844 R 720554 CDS YP_005046965.1 374296774 11562882 complement(2829699..2830346) 1 NC_016627.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 2830346 11562882 Clocl_2466 Clostridium clariflavum DSM 19732 translation elongation factor Ts YP_005046965.1 2829699 R 720554 CDS YP_005046966.1 374296775 11562883 complement(2830539..2831297) 1 NC_016627.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 2831297 11562883 Clocl_2467 Clostridium clariflavum DSM 19732 30S ribosomal protein S2 YP_005046966.1 2830539 R 720554 CDS YP_005046967.1 374296776 11562884 2831705..2833525 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA/BipA 2833525 11562884 Clocl_2468 Clostridium clariflavum DSM 19732 GTP-binding protein TypA/BipA YP_005046967.1 2831705 D 720554 CDS YP_005046968.1 374296777 11562885 2833717..2834850 1 NC_016627.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; hypothetical protein 2834850 11562885 Clocl_2469 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046968.1 2833717 D 720554 CDS YP_005046969.1 374296778 11562886 2834948..2835586 1 NC_016627.1 PFAM: O-methyltransferase; putative O-methyltransferase 2835586 11562886 Clocl_2470 Clostridium clariflavum DSM 19732 putative O-methyltransferase YP_005046969.1 2834948 D 720554 CDS YP_005046970.1 374296779 11562887 2835601..2836821 1 NC_016627.1 PFAM: Peptidase family U32; collagenase-like protease 2836821 11562887 Clocl_2471 Clostridium clariflavum DSM 19732 collagenase-like protease YP_005046970.1 2835601 D 720554 CDS YP_005046971.1 374296780 11562888 2837028..2838683 1 NC_016627.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI/penicillin-binding protein 2 2838683 11562888 Clocl_2472 Clostridium clariflavum DSM 19732 cell division protein FtsI/penicillin-binding protein 2 YP_005046971.1 2837028 D 720554 CDS YP_005046972.1 374296781 11562889 complement(2839002..2839541) 1 NC_016627.1 manually curated; hypothetical protein 2839541 11562889 Clocl_2473 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046972.1 2839002 R 720554 CDS YP_005046973.1 374296782 11562890 2839836..2840549 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-K factor; RNA polymerase sigma-27/28 subunit RpsK/SigK 2840549 11562890 Clocl_2474 Clostridium clariflavum DSM 19732 RNA polymerase sigma-27/28 subunit RpsK/SigK YP_005046973.1 2839836 D 720554 CDS YP_005046974.1 374296783 11562891 complement(2840558..2841643) 1 NC_016627.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI; sporulation integral membrane protein YtvI 2841643 11562891 Clocl_2475 Clostridium clariflavum DSM 19732 sporulation integral membrane protein YtvI YP_005046974.1 2840558 R 720554 CDS YP_005046975.1 374296784 11562892 complement(2841996..2842718) 1 NC_016627.1 PFAM: Tryptophan synthase alpha chain; tryptophan synthase alpha chain 2842718 11562892 Clocl_2476 Clostridium clariflavum DSM 19732 tryptophan synthase alpha chain YP_005046975.1 2841996 R 720554 CDS YP_005046976.1 374296785 11562893 complement(2842810..2843964) 1 NC_016627.1 PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 2843964 11562893 Clocl_2477 Clostridium clariflavum DSM 19732 alcohol dehydrogenase YP_005046976.1 2842810 R 720554 CDS YP_005046977.1 374296786 11562894 complement(2843968..2844762) 1 NC_016627.1 PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family; membrane complex biogenesis protein, BtpA family 2844762 11562894 Clocl_2478 Clostridium clariflavum DSM 19732 membrane complex biogenesis protein, BtpA family YP_005046977.1 2843968 R 720554 CDS YP_005046978.1 374296787 11562895 complement(2844755..2845516) 1 NC_016627.1 PFAM: Phosphorylase superfamily; uridine phosphorylase 2845516 11562895 Clocl_2479 Clostridium clariflavum DSM 19732 uridine phosphorylase YP_005046978.1 2844755 R 720554 CDS YP_005046979.1 374296788 11562896 complement(2845518..2846474) 1 NC_016627.1 PFAM: pfkB family carbohydrate kinase; sugar kinase 2846474 11562896 Clocl_2480 Clostridium clariflavum DSM 19732 sugar kinase YP_005046979.1 2845518 R 720554 CDS YP_005046980.1 374296789 11562897 complement(2846471..2847043) 1 NC_016627.1 PFAM: Isochorismatase family; nicotinamidase-like amidase 2847043 11562897 Clocl_2481 Clostridium clariflavum DSM 19732 nicotinamidase-like amidase YP_005046980.1 2846471 R 720554 CDS YP_005046981.1 374296790 11562898 complement(2847036..2847953) 1 NC_016627.1 PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease 2847953 11562898 Clocl_2482 Clostridium clariflavum DSM 19732 ABC transporter permease YP_005046981.1 2847036 R 720554 CDS YP_005046982.1 374296791 11562899 complement(2847975..2849063) 1 NC_016627.1 PFAM: Branched-chain amino acid transport system / permease component; ABC transporter permease 2849063 11562899 Clocl_2483 Clostridium clariflavum DSM 19732 ABC transporter permease YP_005046982.1 2847975 R 720554 CDS YP_005046983.1 374296792 11562900 complement(2849084..2850628) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter ATPase 2850628 11562900 Clocl_2484 Clostridium clariflavum DSM 19732 ABC transporter ATPase YP_005046983.1 2849084 R 720554 CDS YP_005046984.1 374296793 11562901 complement(2850659..2851834) 1 NC_016627.1 PFAM: Basic membrane protein; putative ABC-type transport system, periplasmic component/surface lipoprotein 2851834 11562901 Clocl_2485 Clostridium clariflavum DSM 19732 putative ABC-type transport system, periplasmic component/surface lipoprotein YP_005046984.1 2850659 R 720554 CDS YP_005046985.1 374296794 11562902 complement(2852035..2852751) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; transcriptional regulator 2852751 11562902 Clocl_2486 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005046985.1 2852035 R 720554 CDS YP_005046986.1 374296795 11562903 complement(2853292..2853756) 1 NC_016627.1 flavodoxin 2853756 11562903 Clocl_2487 Clostridium clariflavum DSM 19732 flavodoxin YP_005046986.1 2853292 R 720554 CDS YP_005046987.1 374296796 11562904 2854375..2855634 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 2855634 11562904 Clocl_2488 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046987.1 2854375 D 720554 CDS YP_005046988.1 374296797 11562905 2855833..2856237 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 2856237 11562905 Clocl_2489 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005046988.1 2855833 D 720554 CDS YP_005046989.1 374296798 11562908 complement(2858399..2858650) 1 NC_016627.1 hypothetical protein 2858650 11562908 Clocl_2492 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046989.1 2858399 R 720554 CDS YP_005046990.1 374296799 11562909 complement(2858837..2859043) 1 NC_016627.1 hypothetical protein 2859043 11562909 Clocl_2493 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046990.1 2858837 R 720554 CDS YP_005046991.1 374296800 11562911 complement(2860785..2862002) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 2862002 11562911 Clocl_2495 Clostridium clariflavum DSM 19732 transposase YP_005046991.1 2860785 R 720554 CDS YP_005046992.1 374296801 11562913 complement(2864644..2865120) 1 NC_016627.1 hypothetical protein 2865120 11562913 Clocl_2497 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046992.1 2864644 R 720554 CDS YP_005046993.1 374296802 11562914 complement(2865128..2867833) 1 NC_016627.1 TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 2867833 11562914 Clocl_2498 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005046993.1 2865128 R 720554 CDS YP_005046994.1 374296803 11562915 complement(2867882..2868277) 1 NC_016627.1 hypothetical protein 2868277 11562915 Clocl_2499 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046994.1 2867882 R 720554 CDS YP_005046995.1 374296804 11562916 2868463..2869806 1 NC_016627.1 PFAM: Transposase domain (DUF772); hypothetical protein 2869806 11562916 Clocl_2500 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046995.1 2868463 D 720554 CDS YP_005046996.1 374296805 11562917 complement(2870041..2870940) 1 NC_016627.1 PFAM: Integrase core domain; transposase 2870940 11562917 Clocl_2501 Clostridium clariflavum DSM 19732 transposase YP_005046996.1 2870041 R 720554 CDS YP_005046997.1 374296806 11562918 complement(2870900..2871193) 1 NC_016627.1 PFAM: Transposase; transposase 2871193 11562918 Clocl_2502 Clostridium clariflavum DSM 19732 transposase YP_005046997.1 2870900 R 720554 CDS YP_005046998.1 374296807 11562920 complement(2872349..2873059) 1 NC_016627.1 hypothetical protein 2873059 11562920 Clocl_2504 Clostridium clariflavum DSM 19732 hypothetical protein YP_005046998.1 2872349 R 720554 CDS YP_005046999.1 374296808 11562921 complement(2873094..2885216) 1 NC_016627.1 PFAM: Kelch motif; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 2885216 11562921 Clocl_2505 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005046999.1 2873094 R 720554 CDS YP_005047000.1 374296809 11562922 complement(2885510..2887891) 1 NC_016627.1 PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; manually curated; MutS2 family protein 2887891 11562922 Clocl_2506 Clostridium clariflavum DSM 19732 MutS2 family protein YP_005047000.1 2885510 R 720554 CDS YP_005047001.1 374296810 11562923 2888213..2888425 1 NC_016627.1 hypothetical protein 2888425 11562923 Clocl_2507 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047001.1 2888213 D 720554 CDS YP_005047002.1 374296811 11562924 complement(2888618..2889688) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 2889688 11562924 Clocl_2508 Clostridium clariflavum DSM 19732 N-acetylmuramoyl-L-alanine amidase YP_005047002.1 2888618 R 720554 CDS YP_005047003.1 374296812 11562925 complement(2889878..2890183) 1 NC_016627.1 manually curated; hypothetical protein 2890183 11562925 Clocl_2509 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047003.1 2889878 R 720554 CDS YP_005047004.1 374296813 11562926 complement(2890436..2891812) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein 2891812 11562926 Clocl_2510 Clostridium clariflavum DSM 19732 sugar ABC transporter periplasmic protein YP_005047004.1 2890436 R 720554 CDS YP_005047005.1 374296814 11562927 complement(2892244..2892849) 1 NC_016627.1 hypothetical protein 2892849 11562927 Clocl_2511 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047005.1 2892244 R 720554 CDS YP_005047006.1 374296815 11562928 2893183..2893689 1 NC_016627.1 hypothetical protein 2893689 11562928 Clocl_2512 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047006.1 2893183 D 720554 CDS YP_005047007.1 374296816 11562929 complement(2893843..2894703) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 2894703 11562929 Clocl_2513 Clostridium clariflavum DSM 19732 carbohydrate ABC transporter membrane protein 2 YP_005047007.1 2893843 R 720554 CDS YP_005047008.1 374296817 11562930 complement(2894723..2895640) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 2895640 11562930 Clocl_2514 Clostridium clariflavum DSM 19732 carbohydrate ABC transporter membrane protein 1 YP_005047008.1 2894723 R 720554 CDS YP_005047009.1 374296818 11562931 complement(2895747..2897129) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter periplasmic protein 2897129 11562931 Clocl_2515 Clostridium clariflavum DSM 19732 sugar ABC transporter periplasmic protein YP_005047009.1 2895747 R 720554 CDS YP_005047010.1 374296819 11562932 complement(2898045..2899652) 1 NC_016627.1 PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A; stage IV sporulation protein A 2899652 11562932 Clocl_2516 Clostridium clariflavum DSM 19732 stage IV sporulation protein A YP_005047010.1 2898045 R 720554 CDS YP_005047011.1 374296820 11562933 complement(2899820..2900842) 1 NC_016627.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; glycerol-3-phosphate dehydrogenase 2900842 11562933 Clocl_2517 Clostridium clariflavum DSM 19732 glycerol-3-phosphate dehydrogenase YP_005047011.1 2899820 R 720554 CDS YP_005047012.1 374296821 11562934 complement(2900861..2901505) 1 NC_016627.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; acyl-phosphate glycerol-3-phosphate acyltransferase 2901505 11562934 Clocl_2518 Clostridium clariflavum DSM 19732 acyl-phosphate glycerol-3-phosphate acyltransferase YP_005047012.1 2900861 R 720554 CDS YP_005047013.1 374296822 11562935 complement(2901511..2902833) 1 NC_016627.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; ribosome-associated GTPase EngA 2902833 11562935 Clocl_2519 Clostridium clariflavum DSM 19732 ribosome-associated GTPase EngA YP_005047013.1 2901511 R 720554 CDS YP_005047014.1 374296823 11562936 complement(2902872..2904242) 1 NC_016627.1 PFAM: Protein of unknown function (DUF512); PDZ domain (Also known as DHR or GLGF); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase; manually curated; Fe-S oxidoreductase 2904242 11562936 Clocl_2520 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase YP_005047014.1 2902872 R 720554 CDS YP_005047015.1 374296824 11562937 complement(2904453..2904632) 1 NC_016627.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 2904632 11562937 Clocl_2521 Clostridium clariflavum DSM 19732 50S ribosomal protein L32 YP_005047015.1 2904453 R 720554 CDS YP_005047016.1 374296825 11562938 complement(2904691..2905185) 1 NC_016627.1 PFAM: Uncharacterized ACR, COG1399; putative metal-binding protein, possibly nucleic-acid binding protein 2905185 11562938 Clocl_2522 Clostridium clariflavum DSM 19732 putative metal-binding protein, possibly nucleic-acid binding protein YP_005047016.1 2904691 R 720554 CDS YP_005047017.1 374296826 11562939 complement(2905972..2907165) 1 NC_016627.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase 2907165 11562939 Clocl_2523 Clostridium clariflavum DSM 19732 acetate kinase YP_005047017.1 2905972 R 720554 CDS YP_005047018.1 374296827 11562940 complement(2907251..2908243) 1 NC_016627.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphate acetyltransferase 2908243 11562940 Clocl_2524 Clostridium clariflavum DSM 19732 phosphate acetyltransferase YP_005047018.1 2907251 R 720554 CDS YP_005047019.1 374296828 11562941 complement(2908654..2910084) 1 NC_016627.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B 2910084 11562941 Clocl_2525 Clostridium clariflavum DSM 19732 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit B YP_005047019.1 2908654 R 720554 CDS YP_005047020.1 374296829 11562942 complement(2910086..2911555) 1 NC_016627.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A 2911555 11562942 Clocl_2526 Clostridium clariflavum DSM 19732 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit A YP_005047020.1 2910086 R 720554 CDS YP_005047021.1 374296830 11562943 complement(2911633..2911920) 1 NC_016627.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C 2911920 11562943 Clocl_2527 Clostridium clariflavum DSM 19732 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C YP_005047021.1 2911633 R 720554 CDS YP_005047022.1 374296831 11562944 complement(2912022..2912870) 1 NC_016627.1 PFAM: GlcNAc-PI de-N-acetylase; putative LmbE-like protein 2912870 11562944 Clocl_2528 Clostridium clariflavum DSM 19732 putative LmbE-like protein YP_005047022.1 2912022 R 720554 CDS YP_005047023.1 374296832 11562945 2913366..2913917 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 2913917 11562945 Clocl_2529 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005047023.1 2913366 D 720554 CDS YP_005047024.1 374296833 11562946 2913924..2915417 1 NC_016627.1 hypothetical protein 2915417 11562946 Clocl_2530 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047024.1 2913924 D 720554 CDS YP_005047025.1 374296834 11562947 2915497..2916714 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 2916714 11562947 Clocl_2531 Clostridium clariflavum DSM 19732 transposase YP_005047025.1 2915497 D 720554 CDS YP_005047026.1 374296835 11562948 complement(2917041..2919032) 1 NC_016627.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; TIGRFAM: DNA ligase, NAD-dependent; NAD-dependent DNA ligase 2919032 11562948 Clocl_2532 Clostridium clariflavum DSM 19732 NAD-dependent DNA ligase YP_005047026.1 2917041 R 720554 CDS YP_005047027.1 374296836 11562949 complement(2919086..2919775) 1 NC_016627.1 hypothetical protein 2919775 11562949 Clocl_2533 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047027.1 2919086 R 720554 CDS YP_005047028.1 374296837 11562950 complement(2919988..2920845) 1 NC_016627.1 PFAM: N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 2920845 11562950 Clocl_2534 Clostridium clariflavum DSM 19732 N-acetylmuramoyl-L-alanine amidase YP_005047028.1 2919988 R 720554 CDS YP_005047029.1 374296838 11562951 complement(2921310..2922314) 1 NC_016627.1 PFAM: Germination protease; TIGRFAM: GPR endopeptidase; GPR endopeptidase 2922314 11562951 Clocl_2535 Clostridium clariflavum DSM 19732 GPR endopeptidase YP_005047029.1 2921310 R 720554 CDS YP_005047030.1 374296839 11562952 2922448..2922714 1 NC_016627.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 2922714 11562952 Clocl_2536 Clostridium clariflavum DSM 19732 30S ribosomal protein S20 YP_005047030.1 2922448 D 720554 CDS YP_005047031.1 374296840 11562953 complement(2922863..2923876) 1 NC_016627.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 2923876 11562953 Clocl_2537 Clostridium clariflavum DSM 19732 DNA polymerase III subunit delta YP_005047031.1 2922863 R 720554 CDS YP_005047032.1 374296841 11562954 complement(2923866..2926265) 1 NC_016627.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; manually curated; DNA internalization-related competence protein ComEC/Rec2 2926265 11562954 Clocl_2538 Clostridium clariflavum DSM 19732 DNA internalization-related competence protein ComEC/Rec2 YP_005047032.1 2923866 R 720554 CDS YP_005047033.1 374296842 11562955 complement(2926379..2927473) 1 NC_016627.1 PFAM: NlpC/P60 family; Bacterial SH3 domain; cell wall-associated hydrolase, invasion-associated protein 2927473 11562955 Clocl_2539 Clostridium clariflavum DSM 19732 cell wall-associated hydrolase, invasion-associated protein YP_005047033.1 2926379 R 720554 CDS YP_005047034.1 374296843 11562956 complement(2927775..2928296) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 2928296 11562956 Clocl_2540 Clostridium clariflavum DSM 19732 acetyltransferase, ribosomal protein N-acetylase YP_005047034.1 2927775 R 720554 CDS YP_005047035.1 374296844 11562957 2928590..2928793 1 NC_016627.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 2928793 11562957 Clocl_2541 Clostridium clariflavum DSM 19732 small, acid-soluble spore protein, alpha/beta type YP_005047035.1 2928590 D 720554 CDS YP_005047036.1 374296845 11562958 complement(2929525..2930823) 1 NC_016627.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; hydroxymethylpyrimidine synthase 2930823 11562958 Clocl_2542 Clostridium clariflavum DSM 19732 hydroxymethylpyrimidine synthase YP_005047036.1 2929525 R 720554 CDS YP_005047037.1 374296846 11562959 complement(2930823..2931470) 1 NC_016627.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine-phosphate diphosphorylase 2931470 11562959 Clocl_2543 Clostridium clariflavum DSM 19732 thiamine-phosphate diphosphorylase YP_005047037.1 2930823 R 720554 CDS YP_005047038.1 374296847 11562960 complement(2931471..2932088) 1 NC_016627.1 PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2; thiamine biosynthesis protein ThiF, family 2 2932088 11562960 Clocl_2544 Clostridium clariflavum DSM 19732 thiamine biosynthesis protein ThiF, family 2 YP_005047038.1 2931471 R 720554 CDS YP_005047039.1 374296848 11562961 complement(2932101..2933204) 1 NC_016627.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH; tyrosine lyase ThiH 2933204 11562961 Clocl_2545 Clostridium clariflavum DSM 19732 tyrosine lyase ThiH YP_005047039.1 2932101 R 720554 CDS YP_005047040.1 374296849 11562962 complement(2933275..2934045) 1 NC_016627.1 PFAM: Thiazole biosynthesis protein ThiG; putative enzyme of thiazole biosynthesis 2934045 11562962 Clocl_2546 Clostridium clariflavum DSM 19732 putative enzyme of thiazole biosynthesis YP_005047040.1 2933275 R 720554 CDS YP_005047041.1 374296850 11562963 complement(2934050..2934250) 1 NC_016627.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2934250 11562963 Clocl_2547 Clostridium clariflavum DSM 19732 thiamine biosynthesis protein ThiS YP_005047041.1 2934050 R 720554 CDS YP_005047042.1 374296851 11562964 complement(2934692..2935273) 1 NC_016627.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; ribosome biogenesis GTP-binding protein YsxC/EngB 2935273 11562964 Clocl_2548 Clostridium clariflavum DSM 19732 ribosome biogenesis GTP-binding protein YsxC/EngB YP_005047042.1 2934692 R 720554 CDS YP_005047043.1 374296852 11562965 complement(2935447..2936490) 1 NC_016627.1 hypothetical protein 2936490 11562965 Clocl_2549 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047043.1 2935447 R 720554 CDS YP_005047044.1 374296853 11562966 2936759..2936896 1 NC_016627.1 hypothetical protein 2936896 11562966 Clocl_2550 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047044.1 2936759 D 720554 CDS YP_005047045.1 374296854 11562967 2937251..2937451 1 NC_016627.1 hypothetical protein 2937451 11562967 Clocl_2551 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047045.1 2937251 D 720554 CDS YP_005047046.1 374296855 11562968 2938033..2938326 1 NC_016627.1 hypothetical protein 2938326 11562968 Clocl_2552 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047046.1 2938033 D 720554 CDS YP_005047047.1 374296856 11562969 complement(2938425..2939717) 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 2939717 11562969 Clocl_2553 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005047047.1 2938425 R 720554 CDS YP_005047048.1 374296857 11562970 complement(2939818..2942079) 1 NC_016627.1 PFAM: Bacterial membrane protein YfhO; manually curated; hypothetical protein 2942079 11562970 Clocl_2554 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047048.1 2939818 R 720554 CDS YP_005047049.1 374296858 11562971 complement(2942132..2943130) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 2943130 11562971 Clocl_2555 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005047049.1 2942132 R 720554 CDS YP_005047050.1 374296859 11562972 complement(2943420..2944145) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1113); hypothetical protein 2944145 11562972 Clocl_2556 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047050.1 2943420 R 720554 CDS YP_005047051.1 374296860 11562973 complement(2944407..2944988) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 2944988 11562973 Clocl_2557 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005047051.1 2944407 R 720554 CDS YP_005047052.1 374296861 11562975 complement(2945337..2945627) 1 NC_016627.1 PFAM: Protein of unknown function (DUF503); hypothetical protein 2945627 11562975 Clocl_2559 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047052.1 2945337 R 720554 CDS YP_005047053.1 374296862 11562976 2945746..2946906 1 NC_016627.1 PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains 2946906 11562976 Clocl_2560 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005047053.1 2945746 D 720554 CDS YP_005047054.1 374296863 11562977 2947214..2948995 1 NC_016627.1 PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); putative RNA-binding protein, snRNP like protein 2948995 11562977 Clocl_2561 Clostridium clariflavum DSM 19732 putative RNA-binding protein, snRNP like protein YP_005047054.1 2947214 D 720554 CDS YP_005047055.1 374296864 11562978 2949003..2950190 1 NC_016627.1 PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 2950190 11562978 Clocl_2562 Clostridium clariflavum DSM 19732 aspartate/tyrosine/aromatic aminotransferase YP_005047055.1 2949003 D 720554 CDS YP_005047056.1 374296865 11562979 complement(2950251..2950886) 1 NC_016627.1 PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; thiamine diphosphokinase 2950886 11562979 Clocl_2563 Clostridium clariflavum DSM 19732 thiamine diphosphokinase YP_005047056.1 2950251 R 720554 CDS YP_005047057.1 374296866 11562980 complement(2950904..2951563) 1 NC_016627.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase 2951563 11562980 Clocl_2564 Clostridium clariflavum DSM 19732 ribulose-5-phosphate 3-epimerase YP_005047057.1 2950904 R 720554 CDS YP_005047058.1 374296867 11562981 complement(2951682..2952569) 1 NC_016627.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A 2952569 11562981 Clocl_2565 Clostridium clariflavum DSM 19732 ribosome small subunit-dependent GTPase A YP_005047058.1 2951682 R 720554 CDS YP_005047059.1 374296868 11562982 complement(2952599..2954536) 1 NC_016627.1 PFAM: Protein kinase domain; PASTA domain; serine/threonine protein kinase 2954536 11562982 Clocl_2566 Clostridium clariflavum DSM 19732 serine/threonine protein kinase YP_005047059.1 2952599 R 720554 CDS YP_005047060.1 374296869 11562983 complement(2954772..2955509) 1 NC_016627.1 PFAM: Protein phosphatase 2C; serine/threonine protein phosphatase 2955509 11562983 Clocl_2567 Clostridium clariflavum DSM 19732 serine/threonine protein phosphatase YP_005047060.1 2954772 R 720554 CDS YP_005047061.1 374296870 11562984 complement(2955573..2956619) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; 23S rRNA m(2)A-2503 methyltransferase 2956619 11562984 Clocl_2568 Clostridium clariflavum DSM 19732 23S rRNA m(2)A-2503 methyltransferase YP_005047061.1 2955573 R 720554 CDS YP_005047062.1 374296871 11562985 complement(2956624..2957976) 1 NC_016627.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family putative RNA methylase; transcription antitermination factor NusB; ribosomal RNA small subunit methyltransferase RsmB/transcription antitermination factor NusB 2957976 11562985 Clocl_2569 Clostridium clariflavum DSM 19732 ribosomal RNA small subunit methyltransferase RsmB/transcription antitermination factor NusB YP_005047062.1 2956624 R 720554 CDS YP_005047063.1 374296872 11562986 complement(2958000..2958698) 1 NC_016627.1 PFAM: Putative neutral zinc metallopeptidase; putative Zn-dependent protease 2958698 11562986 Clocl_2570 Clostridium clariflavum DSM 19732 putative Zn-dependent protease YP_005047063.1 2958000 R 720554 CDS YP_005047064.1 374296873 11562987 complement(2958782..2959477) 1 NC_016627.1 PFAM: Protein of unknown function DUF116; manually curated; hypothetical protein 2959477 11562987 Clocl_2571 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047064.1 2958782 R 720554 CDS YP_005047065.1 374296874 11562988 complement(2959524..2960441) 1 NC_016627.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 2960441 11562988 Clocl_2572 Clostridium clariflavum DSM 19732 methionyl-tRNA formyltransferase YP_005047065.1 2959524 R 720554 CDS YP_005047066.1 374296875 11562989 complement(2960543..2961010) 1 NC_016627.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 2961010 11562989 Clocl_2573 Clostridium clariflavum DSM 19732 peptide deformylase YP_005047066.1 2960543 R 720554 CDS YP_005047067.1 374296876 11562990 complement(2961087..2963534) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'; replication restart DNA helicase PriA 2963534 11562990 Clocl_2574 Clostridium clariflavum DSM 19732 replication restart DNA helicase PriA YP_005047067.1 2961087 R 720554 CDS YP_005047068.1 374296877 11562991 complement(2963742..2964254) 1 NC_016627.1 PFAM: Heptaprenyl diphosphate synthase component I; hypothetical protein 2964254 11562991 Clocl_2575 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047068.1 2963742 R 720554 CDS YP_005047069.1 374296878 11562992 complement(2964380..2964772) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1312); hypothetical protein 2964772 11562992 Clocl_2576 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047069.1 2964380 R 720554 CDS YP_005047070.1 374296879 11562993 complement(2964744..2965805) 1 NC_016627.1 PFAM: ApbE family; membrane-associated lipoprotein involved in thiamine biosynthesis 2965805 11562993 Clocl_2577 Clostridium clariflavum DSM 19732 membrane-associated lipoprotein involved in thiamine biosynthesis YP_005047070.1 2964744 R 720554 CDS YP_005047071.1 374296880 11562994 complement(2965956..2966639) 1 NC_016627.1 PFAM: Single-strand binding protein family; single-stranded DNA-binding protein 2966639 11562994 Clocl_2578 Clostridium clariflavum DSM 19732 single-stranded DNA-binding protein YP_005047071.1 2965956 R 720554 CDS YP_005047072.1 374296881 11562995 complement(join(2967031..2967690,2967689..2967754)) 1 NC_016627.1 PFAM: Mur ligase middle domain; manually curated; UDP-N-acetylmuramyl tripeptide synthase 2967754 11562995 Clocl_2579 Clostridium clariflavum DSM 19732 UDP-N-acetylmuramyl tripeptide synthase YP_005047072.1 2967031 R 720554 CDS YP_005047073.1 374296882 11562996 complement(2967865..2968635) 1 NC_016627.1 PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; putative xylanase/chitin deacetylase 2968635 11562996 Clocl_2580 Clostridium clariflavum DSM 19732 putative xylanase/chitin deacetylase YP_005047073.1 2967865 R 720554 CDS YP_005047074.1 374296883 11562997 complement(2968769..2969566) 1 NC_016627.1 hypothetical protein 2969566 11562997 Clocl_2581 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047074.1 2968769 R 720554 CDS YP_005047075.1 374296884 11562998 complement(2969919..2970236) 1 NC_016627.1 PFAM: Domain of unknown function (DUF74); hypothetical protein 2970236 11562998 Clocl_2582 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047075.1 2969919 R 720554 CDS YP_005047076.1 374296885 11562999 complement(2970271..2970957) 1 NC_016627.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; putative endonuclease III-like protein 2970957 11562999 Clocl_2583 Clostridium clariflavum DSM 19732 putative endonuclease III-like protein YP_005047076.1 2970271 R 720554 CDS YP_005047077.1 374296886 11563000 complement(2971031..2971288) 1 NC_016627.1 hypothetical protein 2971288 11563000 Clocl_2584 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047077.1 2971031 R 720554 CDS YP_005047078.1 374296887 11563001 2971577..2973421 1 NC_016627.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 2973421 11563001 Clocl_2585 Clostridium clariflavum DSM 19732 asparagine synthase YP_005047078.1 2971577 D 720554 CDS YP_005047079.1 374296888 11563002 2973751..2974812 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 2974812 11563002 Clocl_2586 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005047079.1 2973751 D 720554 CDS YP_005047080.1 374296889 11563004 2975999..2979928 1 NC_016627.1 PFAM: Carbohydrate binding module (family 6); manually curated; CBM6-containing protein 2979928 11563004 Clocl_2588 Clostridium clariflavum DSM 19732 CBM6-containing protein YP_005047080.1 2975999 D 720554 CDS YP_005047081.1 374296890 11563005 complement(2980072..2983842) 1 NC_016627.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II; phosphoribosylformylglycinamidine synthase 2983842 11563005 Clocl_2589 Clostridium clariflavum DSM 19732 phosphoribosylformylglycinamidine synthase YP_005047081.1 2980072 R 720554 CDS YP_005047082.1 374296891 11563006 2983972..2984868 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; transcriptional regulator 2984868 11563006 Clocl_2590 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005047082.1 2983972 D 720554 CDS YP_005047083.1 374296892 11563007 2985144..2985695 1 NC_016627.1 PFAM: Cupin domain; Helix-turn-helix; putative transcriptional regulator with cupin domain 2985695 11563007 Clocl_2591 Clostridium clariflavum DSM 19732 putative transcriptional regulator with cupin domain YP_005047083.1 2985144 D 720554 CDS YP_005047084.1 374296893 11563008 2985713..2987365 1 NC_016627.1 PFAM: AMP-binding enzyme; acyl-CoA synthetase/AMP-acid ligase 2987365 11563008 Clocl_2592 Clostridium clariflavum DSM 19732 acyl-CoA synthetase/AMP-acid ligase YP_005047084.1 2985713 D 720554 CDS YP_005047085.1 374296894 11563009 complement(2987468..2989363) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; molecular chaperone of HSP90 family 2989363 11563009 Clocl_2593 Clostridium clariflavum DSM 19732 molecular chaperone of HSP90 family YP_005047085.1 2987468 R 720554 CDS YP_005047086.1 374296895 11563010 complement(2989522..2989950) 1 NC_016627.1 PFAM: Ferric uptake regulator family; Fe2+/Zn2+ uptake regulation protein 2989950 11563010 Clocl_2594 Clostridium clariflavum DSM 19732 Fe2+/Zn2+ uptake regulation protein YP_005047086.1 2989522 R 720554 CDS YP_005047087.1 374296896 11563011 complement(2990078..2990614) 1 NC_016627.1 PFAM: Type IV leader peptidase family; Flp pilus assembly protein, protease CpaA 2990614 11563011 Clocl_2595 Clostridium clariflavum DSM 19732 Flp pilus assembly protein, protease CpaA YP_005047087.1 2990078 R 720554 CDS YP_005047088.1 374296897 11563012 complement(2990633..2992216) 1 NC_016627.1 PFAM: FHA domain; FHA domain-containing protein 2992216 11563012 Clocl_2596 Clostridium clariflavum DSM 19732 FHA domain-containing protein YP_005047088.1 2990633 R 720554 CDS YP_005047089.1 374296898 11563013 complement(2992438..2996190) 1 NC_016627.1 PFAM: GGDEF domain; NB-ARC domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 2996190 11563013 Clocl_2597 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005047089.1 2992438 R 720554 CDS YP_005047090.1 374296899 11563014 complement(2996744..2997892) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2997892 11563014 Clocl_2598 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047090.1 2996744 R 720554 CDS YP_005047091.1 374296900 11563015 complement(2998082..2999254) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 2999254 11563015 Clocl_2599 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047091.1 2998082 R 720554 CDS YP_005047092.1 374296901 11563016 complement(2999424..3000623) 1 NC_016627.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; Xaa-Pro aminopeptidase 3000623 11563016 Clocl_2600 Clostridium clariflavum DSM 19732 Xaa-Pro aminopeptidase YP_005047092.1 2999424 R 720554 CDS YP_005047093.1 374296902 11563017 3000846..3001178 1 NC_016627.1 hypothetical protein 3001178 11563017 Clocl_2601 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047093.1 3000846 D 720554 CDS YP_005047094.1 374296903 11563018 3001258..3001803 1 NC_016627.1 hypothetical protein 3001803 11563018 Clocl_2602 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047094.1 3001258 D 720554 CDS YP_005047095.1 374296904 11563019 complement(3002016..3003233) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3003233 11563019 Clocl_2603 Clostridium clariflavum DSM 19732 transposase YP_005047095.1 3002016 R 720554 CDS YP_005047096.1 374296905 11563020 complement(3003485..3004651) 1 NC_016627.1 PFAM: Tetratricopeptide repeat; manually curated; hypothetical protein 3004651 11563020 Clocl_2604 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047096.1 3003485 R 720554 CDS YP_005047097.1 374296906 11563021 complement(3004690..3006105) 1 NC_016627.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 3006105 11563021 Clocl_2605 Clostridium clariflavum DSM 19732 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_005047097.1 3004690 R 720554 CDS YP_005047098.1 374296907 11563022 complement(3006135..3008876) 1 NC_016627.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit secA 3008876 11563022 Clocl_2606 Clostridium clariflavum DSM 19732 protein translocase subunit secA YP_005047098.1 3006135 R 720554 CDS YP_005047099.1 374296908 11563023 complement(3009008..3009616) 1 NC_016627.1 hypothetical protein 3009616 11563023 Clocl_2607 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047099.1 3009008 R 720554 CDS YP_005047100.1 374296909 11563024 complement(3009641..3010054) 1 NC_016627.1 hypothetical protein 3010054 11563024 Clocl_2608 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047100.1 3009641 R 720554 CDS YP_005047101.1 374296910 11563025 complement(3010144..3010446) 1 NC_016627.1 PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD; TrpR-related protein YerC/YecD 3010446 11563025 Clocl_2609 Clostridium clariflavum DSM 19732 TrpR-related protein YerC/YecD YP_005047101.1 3010144 R 720554 CDS YP_005047102.1 374296911 11563026 3011263..3012594 1 NC_016627.1 PFAM: HD domain; Poly A polymerase head domain; tRNA nucleotidyltransferase/poly(A) polymerase 3012594 11563026 Clocl_2610 Clostridium clariflavum DSM 19732 tRNA nucleotidyltransferase/poly(A) polymerase YP_005047102.1 3011263 D 720554 CDS YP_005047103.1 374296912 11563027 3012591..3013514 1 NC_016627.1 PFAM: Putative lysophospholipase; lysophospholipase 3013514 11563027 Clocl_2611 Clostridium clariflavum DSM 19732 lysophospholipase YP_005047103.1 3012591 D 720554 CDS YP_005047104.1 374296913 11563028 3013648..3015057 1 NC_016627.1 hypothetical protein 3015057 11563028 Clocl_2612 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047104.1 3013648 D 720554 CDS YP_005047105.1 374296914 11563030 complement(3016236..3016481) 1 NC_016627.1 PFAM: Transposase; transposase 3016481 11563030 Clocl_2614 Clostridium clariflavum DSM 19732 transposase YP_005047105.1 3016236 R 720554 CDS YP_005047106.1 374296915 11563032 3021035..3022426 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 3022426 11563032 Clocl_2616 Clostridium clariflavum DSM 19732 transposase family protein YP_005047106.1 3021035 D 720554 CDS YP_005047107.1 374296916 11563033 complement(3023170..3023703) 1 NC_016627.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated exonuclease, Cas4 family 3023703 11563033 Clocl_2617 Clostridium clariflavum DSM 19732 CRISPR-associated exonuclease, Cas4 family YP_005047107.1 3023170 R 720554 CDS YP_005047108.1 374296917 11563034 complement(3023724..3025916) 1 NC_016627.1 PFAM: HD domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase, Cas3 family 3025916 11563034 Clocl_2618 Clostridium clariflavum DSM 19732 CRISPR-associated helicase, Cas3 family YP_005047108.1 3023724 R 720554 CDS YP_005047109.1 374296918 11563035 complement(3025932..3026681) 1 NC_016627.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, subtype I-B/TNEAP; CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein, Cas5t family 3026681 11563035 Clocl_2619 Clostridium clariflavum DSM 19732 CRISPR-associated protein, Cas5t family YP_005047109.1 3025932 R 720554 CDS YP_005047110.1 374296919 11563036 complement(3026668..3027552) 1 NC_016627.1 TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP; CRISPR-associated autoregulator, Cst2 family 3027552 11563036 Clocl_2620 Clostridium clariflavum DSM 19732 CRISPR-associated autoregulator, Cst2 family YP_005047110.1 3026668 R 720554 CDS YP_005047111.1 374296920 11563037 complement(3027552..3029141) 1 NC_016627.1 PFAM: CRISPR-associated protein (Cas_CXXC_CXXC); TIGRFAM: CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP; manually curated; CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP 3029141 11563037 Clocl_2621 Clostridium clariflavum DSM 19732 CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP YP_005047111.1 3027552 R 720554 CDS YP_005047112.1 374296921 11563038 3029556..3030845 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3030845 11563038 Clocl_2622 Clostridium clariflavum DSM 19732 transposase YP_005047112.1 3029556 D 720554 CDS YP_005047113.1 374296922 11563039 complement(3031266..3031505) 1 NC_016627.1 hypothetical protein 3031505 11563039 Clocl_2623 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047113.1 3031266 R 720554 CDS YP_005047114.1 374296923 11563040 complement(3032261..3033574) 1 NC_016627.1 hypothetical protein 3033574 11563040 Clocl_2624 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047114.1 3032261 R 720554 CDS YP_005047115.1 374296924 11563041 complement(3033552..3034139) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 3034139 11563041 Clocl_2625 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005047115.1 3033552 R 720554 CDS YP_005047116.1 374296925 11563042 complement(3034486..3035130) 1 NC_016627.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 3035130 11563042 Clocl_2626 Clostridium clariflavum DSM 19732 phosphoribosylanthranilate isomerase YP_005047116.1 3034486 R 720554 CDS YP_005047117.1 374296926 11563043 complement(3035127..3035921) 1 NC_016627.1 PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 3035921 11563043 Clocl_2627 Clostridium clariflavum DSM 19732 Indole-3-glycerol phosphate synthase YP_005047117.1 3035127 R 720554 CDS YP_005047118.1 374296927 11563044 complement(3035992..3037020) 1 NC_016627.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 3037020 11563044 Clocl_2628 Clostridium clariflavum DSM 19732 anthranilate phosphoribosyltransferase YP_005047118.1 3035992 R 720554 CDS YP_005047119.1 374296928 11563045 complement(3037092..3037676) 1 NC_016627.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase, component II 3037676 11563045 Clocl_2629 Clostridium clariflavum DSM 19732 anthranilate synthase, component II YP_005047119.1 3037092 R 720554 CDS YP_005047120.1 374296929 11563046 complement(3037673..3039157) 1 NC_016627.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; anthranilate synthase component I, archaeal clade; anthranilate synthase component I 3039157 11563046 Clocl_2630 Clostridium clariflavum DSM 19732 anthranilate synthase component I YP_005047120.1 3037673 R 720554 CDS YP_005047121.1 374296930 11563047 3039548..3041008 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DNA/RNA helicase 3041008 11563047 Clocl_2631 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005047121.1 3039548 D 720554 CDS YP_005047122.1 374296931 11563048 3041138..3042199 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 3042199 11563048 Clocl_2632 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005047122.1 3041138 D 720554 CDS YP_005047123.1 374296932 11563049 3042348..3043643 1 NC_016627.1 hypothetical protein 3043643 11563049 Clocl_2633 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047123.1 3042348 D 720554 CDS YP_005047124.1 374296933 11563050 3043964..3045058 1 NC_016627.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF 3045058 11563050 Clocl_2634 Clostridium clariflavum DSM 19732 GTP-binding protein YchF YP_005047124.1 3043964 D 720554 CDS YP_005047125.1 374296934 11563051 complement(3045206..3045658) 1 NC_016627.1 PFAM: CheW-like domain; chemotaxis signal transduction protein 3045658 11563051 Clocl_2635 Clostridium clariflavum DSM 19732 chemotaxis signal transduction protein YP_005047125.1 3045206 R 720554 CDS YP_005047126.1 374296935 11563052 3046264..3047277 1 NC_016627.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 3047277 11563052 Clocl_2636 Clostridium clariflavum DSM 19732 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_005047126.1 3046264 D 720554 CDS YP_005047127.1 374296936 11563053 complement(3047407..3049140) 1 NC_016627.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 3049140 11563053 Clocl_2637 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005047127.1 3047407 R 720554 CDS YP_005047128.1 374296937 11563054 complement(3049318..3051546) 1 NC_016627.1 hypothetical protein 3051546 11563054 Clocl_2638 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047128.1 3049318 R 720554 CDS YP_005047129.1 374296938 11563055 complement(3051733..3053055) 1 NC_016627.1 PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain; family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase 3053055 11563055 Clocl_2639 Clostridium clariflavum DSM 19732 family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase YP_005047129.1 3051733 R 720554 CDS YP_005047130.1 374296939 11563056 complement(3053467..3054597) 1 NC_016627.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 3054597 11563056 Clocl_2640 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005047130.1 3053467 R 720554 CDS YP_005047131.1 374296940 11563057 complement(3054853..3055755) 1 NC_016627.1 PFAM: EamA-like transporter family; putative permease, DMT superfamily 3055755 11563057 Clocl_2641 Clostridium clariflavum DSM 19732 putative permease, DMT superfamily YP_005047131.1 3054853 R 720554 CDS YP_005047132.1 374296941 11563058 3055975..3056388 1 NC_016627.1 hypothetical protein 3056388 11563058 Clocl_2642 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047132.1 3055975 D 720554 CDS YP_005047133.1 374296942 11563059 complement(3056515..3057093) 1 NC_016627.1 PFAM: Transglycosylase SLT domain; lytic murein transglycosylase 3057093 11563059 Clocl_2643 Clostridium clariflavum DSM 19732 lytic murein transglycosylase YP_005047133.1 3056515 R 720554 CDS YP_005047134.1 374296943 11563060 complement(3057194..3057781) 1 NC_016627.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 3057781 11563060 Clocl_2644 Clostridium clariflavum DSM 19732 dephospho-CoA kinase YP_005047134.1 3057194 R 720554 CDS YP_005047135.1 374296944 11563061 complement(3057910..3060600) 1 NC_016627.1 PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I 3060600 11563061 Clocl_2645 Clostridium clariflavum DSM 19732 DNA polymerase I YP_005047135.1 3057910 R 720554 CDS YP_005047136.1 374296945 11563062 complement(3060654..3060821) 1 NC_016627.1 hypothetical protein 3060821 11563062 Clocl_2646 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047136.1 3060654 R 720554 CDS YP_005047137.1 374296946 11563063 complement(3061029..3062237) 1 NC_016627.1 hypothetical protein 3062237 11563063 Clocl_2647 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047137.1 3061029 R 720554 CDS YP_005047138.1 374296947 11563064 3062653..3063942 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3063942 11563064 Clocl_2648 Clostridium clariflavum DSM 19732 transposase YP_005047138.1 3062653 D 720554 CDS YP_005047139.1 374296948 11563065 complement(3064122..3064721) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, RpoE 3064721 11563065 Clocl_2649 Clostridium clariflavum DSM 19732 RNA polymerase, sigma-24 subunit, RpoE YP_005047139.1 3064122 R 720554 CDS YP_005047140.1 374296949 11563066 complement(3065195..3065851) 1 NC_016627.1 PFAM: DUF218 domain; hypothetical protein 3065851 11563066 Clocl_2650 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047140.1 3065195 R 720554 CDS YP_005047141.1 374296950 11563067 complement(3065861..3066769) 1 NC_016627.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY 3066769 11563067 Clocl_2651 Clostridium clariflavum DSM 19732 signal recognition particle-docking protein FtsY YP_005047141.1 3065861 R 720554 CDS YP_005047142.1 374296951 11563068 complement(3066891..3070463) 1 NC_016627.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type; manually curated; chromosome segregation protein SMC 3070463 11563068 Clocl_2652 Clostridium clariflavum DSM 19732 chromosome segregation protein SMC YP_005047142.1 3066891 R 720554 CDS YP_005047143.1 374296952 11563069 complement(3070630..3071628) 1 NC_016627.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 3071628 11563069 Clocl_2653 Clostridium clariflavum DSM 19732 4-hydroxythreonine-4-phosphate dehydrogenase YP_005047143.1 3070630 R 720554 CDS YP_005047144.1 374296953 11563070 complement(3071819..3072949) 1 NC_016627.1 PFAM: HlyD family secretion protein; multidrug resistance efflux pump 3072949 11563070 Clocl_2654 Clostridium clariflavum DSM 19732 multidrug resistance efflux pump YP_005047144.1 3071819 R 720554 CDS YP_005047145.1 374296954 11563071 complement(3072946..3073623) 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 3073623 11563071 Clocl_2655 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005047145.1 3072946 R 720554 CDS YP_005047146.1 374296955 11563072 complement(3073661..3076138) 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 3076138 11563072 Clocl_2656 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005047146.1 3073661 R 720554 CDS YP_005047147.1 374296956 11563073 complement(3076195..3077457) 1 NC_016627.1 PFAM: Major Facilitator Superfamily; manually curated; Major Facilitator Superfamily transporter 3077457 11563073 Clocl_2657 Clostridium clariflavum DSM 19732 Major Facilitator Superfamily transporter YP_005047147.1 3076195 R 720554 CDS YP_005047148.1 374296957 11563074 complement(3077559..3081032) 1 NC_016627.1 PFAM: Male sterility protein; Phosphopantetheine attachment site; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: thioester reductase domain; thioester reductase-like protein 3081032 11563074 Clocl_2658 Clostridium clariflavum DSM 19732 thioester reductase-like protein YP_005047148.1 3077559 R 720554 CDS YP_005047149.1 374296958 11563075 complement(3081082..3088779) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain; non-ribosomal peptide synthase domain TIGR01720; manually curated; non-ribosomal peptide synthase/amino acid adenylation enzyme 3088779 11563075 Clocl_2659 Clostridium clariflavum DSM 19732 non-ribosomal peptide synthase/amino acid adenylation enzyme YP_005047149.1 3081082 R 720554 CDS YP_005047150.1 374296959 11563076 complement(3088809..3094031) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Condensation domain; Beta-ketoacyl synthase, C-terminal domain; putative polyketide synthase component,beta-ketoacyl synthase family protein,phosphopantetheine-containing protein 3094031 11563076 Clocl_2660 Clostridium clariflavum DSM 19732 putative polyketide synthase component,beta-ketoacyl synthase family protein,phosphopantetheine-containing protein YP_005047150.1 3088809 R 720554 CDS YP_005047151.1 374296960 11563077 complement(3094046..3098002) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase family protein,phosphopantetheine-containing protein 3098002 11563077 Clocl_2661 Clostridium clariflavum DSM 19732 beta-ketoacyl synthase family protein,phosphopantetheine-containing protein YP_005047151.1 3094046 R 720554 CDS YP_005047152.1 374296961 11563078 complement(3098051..3099733) 1 NC_016627.1 PFAM: Peptidase family M28; putative aminopeptidase 3099733 11563078 Clocl_2662 Clostridium clariflavum DSM 19732 putative aminopeptidase YP_005047152.1 3098051 R 720554 CDS YP_005047153.1 374296962 11563079 complement(3099799..3108306) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase family protein,phosphopantetheine-containing protein 3108306 11563079 Clocl_2663 Clostridium clariflavum DSM 19732 beta-ketoacyl synthase family protein,phosphopantetheine-containing protein YP_005047153.1 3099799 R 720554 CDS YP_005047154.1 374296963 11563080 complement(3108375..3109655) 1 NC_016627.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 3109655 11563080 Clocl_2664 Clostridium clariflavum DSM 19732 malonyl CoA-acyl carrier protein transacylase YP_005047154.1 3108375 R 720554 CDS YP_005047155.1 374296964 11563081 complement(3109673..3112222) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; acyl-CoA synthetase 3112222 11563081 Clocl_2665 Clostridium clariflavum DSM 19732 acyl-CoA synthetase YP_005047155.1 3109673 R 720554 CDS YP_005047156.1 374296965 11563082 complement(3112487..3112666) 1 NC_016627.1 hypothetical protein 3112666 11563082 Clocl_2666 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047156.1 3112487 R 720554 CDS YP_005047157.1 374296966 11563083 complement(3113472..3114257) 1 NC_016627.1 hypothetical protein 3114257 11563083 Clocl_2667 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047157.1 3113472 R 720554 CDS YP_005047158.1 374296967 11563084 complement(3114292..3115956) 1 NC_016627.1 TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 3115956 11563084 Clocl_2668 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005047158.1 3114292 R 720554 CDS YP_005047159.1 374296968 11563085 complement(3116375..3117151) 1 NC_016627.1 hypothetical protein 3117151 11563085 Clocl_2669 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047159.1 3116375 R 720554 CDS YP_005047160.1 374296969 11563087 complement(3118362..3118646) 1 NC_016627.1 hypothetical protein 3118646 11563087 Clocl_2671 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047160.1 3118362 R 720554 CDS YP_005047161.1 374296970 11563089 complement(3119468..3120826) 1 NC_016627.1 PFAM: Mu transposase, C-terminal; Integrase core domain; transposase 3120826 11563089 Clocl_2673 Clostridium clariflavum DSM 19732 transposase YP_005047161.1 3119468 R 720554 CDS YP_005047162.1 374296971 11563090 complement(3120986..3121576) 1 NC_016627.1 hypothetical protein 3121576 11563090 Clocl_2674 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047162.1 3120986 R 720554 CDS YP_005047163.1 374296972 11563092 3122070..3122294 1 NC_016627.1 hypothetical protein 3122294 11563092 Clocl_2676 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047163.1 3122070 D 720554 CDS YP_005047164.1 374296973 11563095 3124441..3124872 1 NC_016627.1 PFAM: SMI1 / KNR4 family; putative glucan synthasis protein 3124872 11563095 Clocl_2679 Clostridium clariflavum DSM 19732 putative glucan synthasis protein YP_005047164.1 3124441 D 720554 CDS YP_005047165.1 374296974 11563096 complement(3125169..3125624) 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 3125624 11563096 Clocl_2680 Clostridium clariflavum DSM 19732 transposase YP_005047165.1 3125169 R 720554 CDS YP_005047166.1 374296975 11563097 complement(3125860..3126060) 1 NC_016627.1 hypothetical protein 3126060 11563097 Clocl_2681 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047166.1 3125860 R 720554 CDS YP_005047167.1 374296976 11563099 complement(3127225..3127578) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 3127578 11563099 Clocl_2683 Clostridium clariflavum DSM 19732 transposase YP_005047167.1 3127225 R 720554 CDS YP_005047168.1 374296977 11563100 complement(3127575..3127928) 1 NC_016627.1 PFAM: Transposase; Transposase 3127928 11563100 Clocl_2684 Clostridium clariflavum DSM 19732 Transposase YP_005047168.1 3127575 R 720554 CDS YP_005047169.1 374296978 11563101 complement(3128189..3128701) 1 NC_016627.1 hypothetical protein 3128701 11563101 Clocl_2685 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047169.1 3128189 R 720554 CDS YP_005047170.1 374296979 11563102 complement(3128948..3129232) 1 NC_016627.1 hypothetical protein 3129232 11563102 Clocl_2686 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047170.1 3128948 R 720554 CDS YP_005047171.1 374296980 11563103 complement(3129229..3130833) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 3130833 11563103 Clocl_2687 Clostridium clariflavum DSM 19732 transposase YP_005047171.1 3129229 R 720554 CDS YP_005047172.1 374296981 11563104 complement(3130897..3131250) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 3131250 11563104 Clocl_2688 Clostridium clariflavum DSM 19732 transposase YP_005047172.1 3130897 R 720554 CDS YP_005047173.1 374296982 11563105 complement(3131247..3131600) 1 NC_016627.1 PFAM: Transposase; Transposase 3131600 11563105 Clocl_2689 Clostridium clariflavum DSM 19732 Transposase YP_005047173.1 3131247 R 720554 CDS YP_005047174.1 374296983 11563106 complement(3131795..3132364) 1 NC_016627.1 manually curated; hypothetical protein 3132364 11563106 Clocl_2690 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047174.1 3131795 R 720554 CDS YP_005047175.1 374296984 11563107 complement(3132377..3134572) 1 NC_016627.1 PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: intein N-terminal splicing region; RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 3134572 11563107 Clocl_2691 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005047175.1 3132377 R 720554 CDS YP_005047176.1 374296985 11563109 complement(3137929..3138090) 1 NC_016627.1 hypothetical protein 3138090 11563109 Clocl_2693 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047176.1 3137929 R 720554 CDS YP_005047177.1 374296986 11563110 complement(3138080..3138214) 1 NC_016627.1 hypothetical protein 3138214 11563110 Clocl_2694 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047177.1 3138080 R 720554 CDS YP_005047178.1 374296987 11563111 complement(3138211..3139815) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 3139815 11563111 Clocl_2695 Clostridium clariflavum DSM 19732 transposase YP_005047178.1 3138211 R 720554 CDS YP_005047179.1 374296988 11563112 complement(3139879..3140583) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; Transposase; transposase 3140583 11563112 Clocl_2696 Clostridium clariflavum DSM 19732 transposase YP_005047179.1 3139879 R 720554 CDS YP_005047180.1 374296989 11563113 complement(3140720..3141115) 1 NC_016627.1 hypothetical protein 3141115 11563113 Clocl_2697 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047180.1 3140720 R 720554 CDS YP_005047181.1 374296990 11563114 complement(3141117..3146693) 1 NC_016627.1 PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 3146693 11563114 Clocl_2698 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005047181.1 3141117 R 720554 CDS YP_005047182.1 374296991 11563115 complement(3147028..3148245) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3148245 11563115 Clocl_2699 Clostridium clariflavum DSM 19732 transposase YP_005047182.1 3147028 R 720554 CDS YP_005047183.1 374296992 11563116 complement(3148334..3148873) 1 NC_016627.1 PFAM: RHS Repeat; Dockerin type I repeat; Putative Ig domain; TIGRFAM: YD repeat (two copies); putative Ig domain-containing protein,RHS repeat protein,dockerin-like protein 3148873 11563116 Clocl_2700 Clostridium clariflavum DSM 19732 putative Ig domain-containing protein,RHS repeat protein,dockerin-like protein YP_005047183.1 3148334 R 720554 CDS YP_005047184.1 374296993 11563117 complement(3149117..3149632) 1 NC_016627.1 PFAM: Protein of unknown function (DUF2947); hypothetical protein 3149632 11563117 Clocl_2701 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047184.1 3149117 R 720554 CDS YP_005047185.1 374296994 11563118 complement(3149644..3150006) 1 NC_016627.1 hypothetical protein 3150006 11563118 Clocl_2702 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047185.1 3149644 R 720554 CDS YP_005047186.1 374296995 11563120 complement(3151181..3151480) 1 NC_016627.1 hypothetical protein 3151480 11563120 Clocl_2704 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047186.1 3151181 R 720554 CDS YP_005047187.1 374296996 11563121 complement(3152130..3153020) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; nitrate/sulfonate/bicarbonate ABC transporter permease 3153020 11563121 Clocl_2705 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter permease YP_005047187.1 3152130 R 720554 CDS YP_005047188.1 374296997 11563122 complement(3153064..3153876) 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D; nitrate/sulfonate/bicarbonate ABC transporter ATPase 3153876 11563122 Clocl_2706 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_005047188.1 3153064 R 720554 CDS YP_005047189.1 374296998 11563123 complement(3153886..3154950) 1 NC_016627.1 PFAM: NMT1/THI5 like; nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 3154950 11563123 Clocl_2707 Clostridium clariflavum DSM 19732 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_005047189.1 3153886 R 720554 CDS YP_005047190.1 374296999 11563124 complement(3154980..3155636) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1847); metal-binding protein 3155636 11563124 Clocl_2708 Clostridium clariflavum DSM 19732 metal-binding protein YP_005047190.1 3154980 R 720554 CDS YP_005047191.1 374297000 11563126 complement(3155844..3156902) 1 NC_016627.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; methyltransferase, MtaA/CmuA family 3156902 11563126 Clocl_2710 Clostridium clariflavum DSM 19732 methyltransferase, MtaA/CmuA family YP_005047191.1 3155844 R 720554 CDS YP_005047192.1 374297001 11563127 complement(3156902..3157558) 1 NC_016627.1 PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; putative cobalamin binding protein 3157558 11563127 Clocl_2711 Clostridium clariflavum DSM 19732 putative cobalamin binding protein YP_005047192.1 3156902 R 720554 CDS YP_005047193.1 374297002 11563128 complement(3158353..3158787) 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 3158787 11563128 Clocl_2712 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005047193.1 3158353 R 720554 CDS YP_005047194.1 374297003 11563129 complement(3158813..3159103) 1 NC_016627.1 hypothetical protein 3159103 11563129 Clocl_2713 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047194.1 3158813 R 720554 CDS YP_005047195.1 374297004 11563130 complement(3159055..3159237) 1 NC_016627.1 hypothetical protein 3159237 11563130 Clocl_2714 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047195.1 3159055 R 720554 CDS YP_005047196.1 374297005 11563131 complement(3159277..3160422) 1 NC_016627.1 manually curated; hypothetical protein 3160422 11563131 Clocl_2715 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047196.1 3159277 R 720554 CDS YP_005047197.1 374297006 11563132 complement(3160806..3161318) 1 NC_016627.1 PFAM: NUDIX domain; NTP pyrophosphohydrolase 3161318 11563132 Clocl_2716 Clostridium clariflavum DSM 19732 NTP pyrophosphohydrolase YP_005047197.1 3160806 R 720554 CDS YP_005047198.1 374297007 11563133 complement(3161394..3161561) 1 NC_016627.1 PFAM: Uncharacterized small protein (DUF2292); hypothetical protein 3161561 11563133 Clocl_2717 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047198.1 3161394 R 720554 CDS YP_005047199.1 374297008 11563134 complement(3161561..3161767) 1 NC_016627.1 PFAM: Uncharacterized small protein (DUF2292); hypothetical protein 3161767 11563134 Clocl_2718 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047199.1 3161561 R 720554 CDS YP_005047200.1 374297009 11563135 complement(3161987..3162895) 1 NC_016627.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 2-oxoacid:ferredoxin oxidoreductase subunit beta 3162895 11563135 Clocl_2719 Clostridium clariflavum DSM 19732 2-oxoacid:ferredoxin oxidoreductase subunit beta YP_005047200.1 3161987 R 720554 CDS YP_005047201.1 374297010 11563136 complement(3162888..3164075) 1 NC_016627.1 PFAM: domain; Transketolase, C-terminal domain; 2-oxoacid:ferredoxin oxidoreductase subunit alpha 3164075 11563136 Clocl_2720 Clostridium clariflavum DSM 19732 2-oxoacid:ferredoxin oxidoreductase subunit alpha YP_005047201.1 3162888 R 720554 CDS YP_005047202.1 374297011 11563137 complement(3164065..3164376) 1 NC_016627.1 PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 3164376 11563137 Clocl_2721 Clostridium clariflavum DSM 19732 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family YP_005047202.1 3164065 R 720554 CDS YP_005047203.1 374297012 11563138 complement(3164373..3164918) 1 NC_016627.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 3164918 11563138 Clocl_2722 Clostridium clariflavum DSM 19732 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_005047203.1 3164373 R 720554 CDS YP_005047204.1 374297013 11563139 complement(3164915..3166087) 1 NC_016627.1 PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 3166087 11563139 Clocl_2723 Clostridium clariflavum DSM 19732 aspartate/tyrosine/aromatic aminotransferase YP_005047204.1 3164915 R 720554 CDS YP_005047205.1 374297014 11563140 complement(3166226..3167545) 1 NC_016627.1 PFAM: AMP-binding enzyme; coenzyme F390 synthetase 3167545 11563140 Clocl_2724 Clostridium clariflavum DSM 19732 coenzyme F390 synthetase YP_005047205.1 3166226 R 720554 CDS YP_005047206.1 374297015 11563141 complement(3167561..3168226) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type metal ion transport system permease 3168226 11563141 Clocl_2725 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system permease YP_005047206.1 3167561 R 720554 CDS YP_005047207.1 374297016 11563142 complement(3168219..3169226) 1 NC_016627.1 PFAM: ABC transporter; NIL domain; ABC-type metal ion transport system, ATPase component 3169226 11563142 Clocl_2726 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system, ATPase component YP_005047207.1 3168219 R 720554 CDS YP_005047208.1 374297017 11563143 complement(3169289..3170164) 1 NC_016627.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; ABC-type metal ion transport system, periplasmic component/surface antigen 3170164 11563143 Clocl_2727 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005047208.1 3169289 R 720554 CDS YP_005047209.1 374297018 11563144 complement(3170534..3172249) 1 NC_016627.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; putative metal-binding protein 3172249 11563144 Clocl_2728 Clostridium clariflavum DSM 19732 putative metal-binding protein YP_005047209.1 3170534 R 720554 CDS YP_005047210.1 374297019 11563145 complement(3172249..3173277) 1 NC_016627.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: methyltransferase, MtaA/CmuA family; methyltransferase, MtaA/CmuA family 3173277 11563145 Clocl_2729 Clostridium clariflavum DSM 19732 methyltransferase, MtaA/CmuA family YP_005047210.1 3172249 R 720554 CDS YP_005047211.1 374297020 11563146 complement(3173470..3174645) 1 NC_016627.1 PFAM: Aminotransferase class I and II; bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 3174645 11563146 Clocl_2730 Clostridium clariflavum DSM 19732 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities YP_005047211.1 3173470 R 720554 CDS YP_005047212.1 374297021 11563147 complement(3174661..3175467) 1 NC_016627.1 PFAM: Asparagine synthase; TIGRFAM: TIGR00268 family protein; hypothetical protein 3175467 11563147 Clocl_2731 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047212.1 3174661 R 720554 CDS YP_005047213.1 374297022 11563148 complement(3175505..3175954) 1 NC_016627.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator 3175954 11563148 Clocl_2732 Clostridium clariflavum DSM 19732 rrf2 family protein, putative transcriptional regulator YP_005047213.1 3175505 R 720554 CDS YP_005047214.1 374297023 11563151 complement(3176666..3177424) 1 NC_016627.1 PFAM: tRNAHis guanylyltransferase; hypothetical protein 3177424 11563151 Clocl_2735 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047214.1 3176666 R 720554 CDS YP_005047215.1 374297024 11563152 complement(3177414..3177863) 1 NC_016627.1 putative kinase 3177863 11563152 Clocl_2736 Clostridium clariflavum DSM 19732 putative kinase YP_005047215.1 3177414 R 720554 CDS YP_005047216.1 374297025 11563153 complement(3178319..3178987) 1 NC_016627.1 hypothetical protein 3178987 11563153 Clocl_2737 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047216.1 3178319 R 720554 CDS YP_005047217.1 374297026 11563154 3179214..3180050 1 NC_016627.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain; putative transcriptional regulator 3180050 11563154 Clocl_2738 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047217.1 3179214 D 720554 CDS YP_005047218.1 374297027 11563155 3180208..3180579 1 NC_016627.1 hypothetical protein 3180579 11563155 Clocl_2739 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047218.1 3180208 D 720554 CDS YP_005047219.1 374297028 11563156 complement(3180593..3181033) 1 NC_016627.1 PFAM: AIG2-like family; hypothetical protein 3181033 11563156 Clocl_2740 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047219.1 3180593 R 720554 CDS YP_005047220.1 374297029 11563158 3181571..3182641 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 3182641 11563158 Clocl_2742 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005047220.1 3181571 D 720554 CDS YP_005047221.1 374297030 11563159 complement(3183087..3184304) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3184304 11563159 Clocl_2743 Clostridium clariflavum DSM 19732 transposase YP_005047221.1 3183087 R 720554 CDS YP_005047222.1 374297031 11563160 3184835..3186124 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3186124 11563160 Clocl_2744 Clostridium clariflavum DSM 19732 transposase YP_005047222.1 3184835 D 720554 CDS YP_005047223.1 374297032 11563161 complement(3186328..3188193) 1 NC_016627.1 PFAM: Cohesin domain; S-layer homology domain; manually curated; putative S-layer protein 3188193 11563161 Clocl_2745 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005047223.1 3186328 R 720554 CDS YP_005047224.1 374297033 11563162 complement(3188531..3190552) 1 NC_016627.1 PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); O-Glycosyl hydrolase family 30; O-glycosyl hydrolase 3190552 11563162 Clocl_2746 Clostridium clariflavum DSM 19732 O-glycosyl hydrolase YP_005047224.1 3188531 R 720554 CDS YP_005047225.1 374297034 11563163 complement(3190613..3192550) 1 NC_016627.1 PFAM: PA14 domain; PA14 domain-containing protein 3192550 11563163 Clocl_2747 Clostridium clariflavum DSM 19732 PA14 domain-containing protein YP_005047225.1 3190613 R 720554 CDS YP_005047226.1 374297035 11563164 complement(3192557..3193294) 1 NC_016627.1 TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma-I factor 3193294 11563164 Clocl_2748 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005047226.1 3192557 R 720554 CDS YP_005047227.1 374297036 11563165 complement(3193917..3196034) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3196034 11563165 Clocl_2749 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047227.1 3193917 R 720554 CDS YP_005047228.1 374297037 11563166 complement(3196327..3197352) 1 NC_016627.1 PFAM: D-ala D-ala ligase C-terminus; ATP-grasp enzyme, D-alanine-D-alanine ligase 3197352 11563166 Clocl_2750 Clostridium clariflavum DSM 19732 ATP-grasp enzyme, D-alanine-D-alanine ligase YP_005047228.1 3196327 R 720554 CDS YP_005047229.1 374297038 11563167 complement(3197499..3198836) 1 NC_016627.1 hypothetical protein 3198836 11563167 Clocl_2751 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047229.1 3197499 R 720554 CDS YP_005047230.1 374297039 11563168 complement(3199013..3199372) 1 NC_016627.1 hypothetical protein 3199372 11563168 Clocl_2752 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047230.1 3199013 R 720554 CDS YP_005047231.1 374297040 11563169 complement(3199426..3200136) 1 NC_016627.1 PFAM: Protein of unknown function (DUF421); hypothetical protein 3200136 11563169 Clocl_2753 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047231.1 3199426 R 720554 CDS YP_005047232.1 374297041 11563171 complement(3200751..3203393) 1 NC_016627.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; pyruvate phosphate dikinase 3203393 11563171 Clocl_2755 Clostridium clariflavum DSM 19732 pyruvate phosphate dikinase YP_005047232.1 3200751 R 720554 CDS YP_005047233.1 374297042 11563172 complement(3203895..3205283) 1 NC_016627.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; glycyl-tRNA synthetase 3205283 11563172 Clocl_2756 Clostridium clariflavum DSM 19732 glycyl-tRNA synthetase YP_005047233.1 3203895 R 720554 CDS YP_005047234.1 374297043 11563173 complement(3205333..3206637) 1 NC_016627.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3206637 11563173 Clocl_2757 Clostridium clariflavum DSM 19732 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_005047234.1 3205333 R 720554 CDS YP_005047235.1 374297044 11563174 complement(3206915..3207148) 1 NC_016627.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 3207148 11563174 Clocl_2758 Clostridium clariflavum DSM 19732 DNA-directed RNA polymerase subunit omega YP_005047235.1 3206915 R 720554 CDS YP_005047236.1 374297045 11563175 complement(3207185..3207793) 1 NC_016627.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase 3207793 11563175 Clocl_2759 Clostridium clariflavum DSM 19732 guanylate kinase YP_005047236.1 3207185 R 720554 CDS YP_005047237.1 374297046 11563176 complement(3207805..3208083) 1 NC_016627.1 PFAM: Domain of unknown function (DUF370); hypothetical protein 3208083 11563176 Clocl_2760 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047237.1 3207805 R 720554 CDS YP_005047238.1 374297047 11563177 complement(3208103..3208981) 1 NC_016627.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; hypothetical protein 3208981 11563177 Clocl_2761 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047238.1 3208103 R 720554 CDS YP_005047239.1 374297048 11563178 complement(3209321..3209572) 1 NC_016627.1 hypothetical protein 3209572 11563178 Clocl_2762 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047239.1 3209321 R 720554 CDS YP_005047240.1 374297049 11563179 complement(3209626..3211350) 1 NC_016627.1 PFAM: Ricin-type beta-trefoil lectin domain; Dockerin type I repeat; Glycosyl hydrolases family 43; beta-xylosidase 3211350 11563179 Clocl_2763 Clostridium clariflavum DSM 19732 beta-xylosidase YP_005047240.1 3209626 R 720554 CDS YP_005047241.1 374297050 11563180 complement(3211828..3212199) 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 3212199 11563180 Clocl_2764 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005047241.1 3211828 R 720554 CDS YP_005047242.1 374297051 11563181 complement(3212199..3212942) 1 NC_016627.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; RNA methyltransferase, RsmE family 3212942 11563181 Clocl_2765 Clostridium clariflavum DSM 19732 RNA methyltransferase, RsmE family YP_005047242.1 3212199 R 720554 CDS YP_005047243.1 374297052 11563182 complement(3212924..3213871) 1 NC_016627.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; (50S ribosomal protein L11P)-lysine N-methyltransferase 3213871 11563182 Clocl_2766 Clostridium clariflavum DSM 19732 (50S ribosomal protein L11P)-lysine N-methyltransferase YP_005047243.1 3212924 R 720554 CDS YP_005047244.1 374297053 11563183 complement(3213891..3215042) 1 NC_016627.1 PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; manually curated; chaperone protein DnaJ 3215042 11563183 Clocl_2767 Clostridium clariflavum DSM 19732 chaperone protein DnaJ YP_005047244.1 3213891 R 720554 CDS YP_005047245.1 374297054 11563184 complement(3215179..3217017) 1 NC_016627.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK 3217017 11563184 Clocl_2768 Clostridium clariflavum DSM 19732 chaperone protein DnaK YP_005047245.1 3215179 R 720554 CDS YP_005047246.1 374297055 11563185 complement(3217170..3217826) 1 NC_016627.1 PFAM: GrpE; molecular chaperone GrpE (heat shock protein) 3217826 11563185 Clocl_2769 Clostridium clariflavum DSM 19732 molecular chaperone GrpE (heat shock protein) YP_005047246.1 3217170 R 720554 CDS YP_005047247.1 374297056 11563186 complement(3217810..3218934) 1 NC_016627.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA; heat shock gene repressor HrcA 3218934 11563186 Clocl_2770 Clostridium clariflavum DSM 19732 heat shock gene repressor HrcA YP_005047247.1 3217810 R 720554 CDS YP_005047248.1 374297057 11563187 complement(3219130..3220266) 1 NC_016627.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; putative oxygen-independent coproporphyrinogen III oxidase 3220266 11563187 Clocl_2771 Clostridium clariflavum DSM 19732 putative oxygen-independent coproporphyrinogen III oxidase YP_005047248.1 3219130 R 720554 CDS YP_005047249.1 374297058 11563188 complement(3220281..3222092) 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA 3222092 11563188 Clocl_2772 Clostridium clariflavum DSM 19732 GTP-binding protein LepA YP_005047249.1 3220281 R 720554 CDS YP_005047250.1 374297059 11563189 complement(3222389..3225136) 1 NC_016627.1 PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase 3225136 11563189 Clocl_2773 Clostridium clariflavum DSM 19732 glycerophosphoryl diester phosphodiesterase YP_005047250.1 3222389 R 720554 CDS YP_005047251.1 374297060 11563190 complement(3225460..3225762) 1 NC_016627.1 hypothetical protein 3225762 11563190 Clocl_2774 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047251.1 3225460 R 720554 CDS YP_005047252.1 374297061 11563191 complement(3225854..3227098) 1 NC_016627.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P; stage II sporulation protein P 3227098 11563191 Clocl_2775 Clostridium clariflavum DSM 19732 stage II sporulation protein P YP_005047252.1 3225854 R 720554 CDS YP_005047253.1 374297062 11563192 3227642..3227863 1 NC_016627.1 hypothetical protein 3227863 11563192 Clocl_2776 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047253.1 3227642 D 720554 CDS YP_005047254.1 374297063 11563193 complement(3228073..3232377) 1 NC_016627.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative; hypothetical protein 3232377 11563193 Clocl_2777 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047254.1 3228073 R 720554 CDS YP_005047255.1 374297064 11563194 complement(3232774..3233325) 1 NC_016627.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; manually curated; non-canonical start codon; signal peptidase I 3233325 11563194 Clocl_2778 Clostridium clariflavum DSM 19732 signal peptidase I YP_005047255.1 3232774 R 720554 CDS YP_005047256.1 374297065 11563195 complement(3233554..3235338) 1 NC_016627.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase 3235338 11563195 Clocl_2779 Clostridium clariflavum DSM 19732 aspartyl-tRNA synthetase YP_005047256.1 3233554 R 720554 CDS YP_005047257.1 374297066 11563196 complement(3235373..3236626) 1 NC_016627.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 3236626 11563196 Clocl_2780 Clostridium clariflavum DSM 19732 histidyl-tRNA synthetase YP_005047257.1 3235373 R 720554 CDS YP_005047258.1 374297067 11563197 complement(3237211..3238707) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: coproporphyrinogen dehydrogenase HemZ; coproporphyrinogen dehydrogenase HemZ 3238707 11563197 Clocl_2781 Clostridium clariflavum DSM 19732 coproporphyrinogen dehydrogenase HemZ YP_005047258.1 3237211 R 720554 CDS YP_005047259.1 374297068 11563198 complement(3238726..3239355) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 3239355 11563198 Clocl_2782 Clostridium clariflavum DSM 19732 Zn-dependent hydrolase YP_005047259.1 3238726 R 720554 CDS YP_005047260.1 374297069 11563199 complement(3239441..3239890) 1 NC_016627.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 3239890 11563199 Clocl_2783 Clostridium clariflavum DSM 19732 D-tyrosyl-tRNA(Tyr) deacylase YP_005047260.1 3239441 R 720554 CDS YP_005047261.1 374297070 11563200 complement(3239962..3242139) 1 NC_016627.1 PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; RelA/SpoT family (p)ppGpp synthetase 3242139 11563200 Clocl_2784 Clostridium clariflavum DSM 19732 RelA/SpoT family (p)ppGpp synthetase YP_005047261.1 3239962 R 720554 CDS YP_005047262.1 374297071 11563201 complement(3242257..3242772) 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 3242772 11563201 Clocl_2785 Clostridium clariflavum DSM 19732 adenine phosphoribosyltransferase YP_005047262.1 3242257 R 720554 CDS YP_005047263.1 374297072 11563202 complement(3242883..3245357) 1 NC_016627.1 PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; exonuclease RecJ 3245357 11563202 Clocl_2786 Clostridium clariflavum DSM 19732 exonuclease RecJ YP_005047263.1 3242883 R 720554 CDS YP_005047264.1 374297073 11563203 complement(3245515..3246519) 1 NC_016627.1 PFAM: D-ala-D-ala dipeptidase; D-alanyl-D-alanine dipeptidase 3246519 11563203 Clocl_2787 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine dipeptidase YP_005047264.1 3245515 R 720554 CDS YP_005047265.1 374297074 11563204 complement(3246738..3247193) 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 3247193 11563204 Clocl_2788 Clostridium clariflavum DSM 19732 transposase YP_005047265.1 3246738 R 720554 CDS YP_005047266.1 374297075 11563205 complement(3247372..3247815) 1 NC_016627.1 PFAM: Yqey-like protein; hypothetical protein 3247815 11563205 Clocl_2789 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047266.1 3247372 R 720554 CDS YP_005047267.1 374297076 11563206 complement(3247830..3248006) 1 NC_016627.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 3248006 11563206 Clocl_2790 Clostridium clariflavum DSM 19732 30S ribosomal protein S21 YP_005047267.1 3247830 R 720554 CDS YP_005047268.1 374297077 11563207 complement(3248407..3251697) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Bacterial SNF2 helicase associated; SWIM zinc finger; DNA/RNA helicase 3251697 11563207 Clocl_2791 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005047268.1 3248407 R 720554 CDS YP_005047269.1 374297078 11563208 3252004..3253401 1 NC_016627.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; manually curated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 3253401 11563208 Clocl_2792 Clostridium clariflavum DSM 19732 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_005047269.1 3252004 D 720554 CDS YP_005047270.1 374297079 11563209 complement(3253398..3253883) 1 NC_016627.1 PFAM: VanZ like family; putative integral membrane protein 3253883 11563209 Clocl_2793 Clostridium clariflavum DSM 19732 putative integral membrane protein YP_005047270.1 3253398 R 720554 CDS YP_005047271.1 374297080 11563210 3254391..3255368 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3255368 11563210 Clocl_2794 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047271.1 3254391 D 720554 CDS YP_005047272.1 374297081 11563211 3255589..3256566 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3256566 11563211 Clocl_2795 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047272.1 3255589 D 720554 CDS YP_005047273.1 374297082 11563212 3256594..3259341 1 NC_016627.1 manually curated; hypothetical protein 3259341 11563212 Clocl_2796 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047273.1 3256594 D 720554 CDS YP_005047274.1 374297083 11563213 complement(3259436..3260836) 1 NC_016627.1 manually curated; hypothetical protein 3260836 11563213 Clocl_2797 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047274.1 3259436 R 720554 CDS YP_005047275.1 374297084 11563214 complement(3260843..3261583) 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor 3261583 11563214 Clocl_2798 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005047275.1 3260843 R 720554 CDS YP_005047276.1 374297085 11563215 3261990..3263375 1 NC_016627.1 manually curated; hypothetical protein 3263375 11563215 Clocl_2799 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047276.1 3261990 D 720554 CDS YP_005047277.1 374297086 11563218 complement(3265409..3265792) 1 NC_016627.1 hypothetical protein 3265792 11563218 Clocl_2802 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047277.1 3265409 R 720554 CDS YP_005047278.1 374297087 11563219 complement(3265872..3266444) 1 NC_016627.1 hypothetical protein 3266444 11563219 Clocl_2803 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047278.1 3265872 R 720554 CDS YP_005047279.1 374297088 11563220 complement(3266574..3266927) 1 NC_016627.1 hypothetical protein 3266927 11563220 Clocl_2804 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047279.1 3266574 R 720554 CDS YP_005047280.1 374297089 11563222 complement(3267304..3267696) 1 NC_016627.1 hypothetical protein 3267696 11563222 Clocl_2806 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047280.1 3267304 R 720554 CDS YP_005047281.1 374297090 11563223 complement(3268428..3268742) 1 NC_016627.1 hypothetical protein 3268742 11563223 Clocl_2807 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047281.1 3268428 R 720554 CDS YP_005047282.1 374297091 11563225 complement(3269885..3270628) 1 NC_016627.1 manually curated; hypothetical protein 3270628 11563225 Clocl_2809 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047282.1 3269885 R 720554 CDS YP_005047283.1 374297092 11563226 complement(3270663..3271202) 1 NC_016627.1 hypothetical protein 3271202 11563226 Clocl_2810 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047283.1 3270663 R 720554 CDS YP_005047284.1 374297093 11563227 complement(3271284..3272771) 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; membrane protein involved in the export of O-antigen and teichoic acid 3272771 11563227 Clocl_2811 Clostridium clariflavum DSM 19732 membrane protein involved in the export of O-antigen and teichoic acid YP_005047284.1 3271284 R 720554 CDS YP_005047285.1 374297094 11563228 complement(3272924..3274144) 1 NC_016627.1 PFAM: O-Antigen ligase; Lipid A core--O-antigen ligase-like protein 3274144 11563228 Clocl_2812 Clostridium clariflavum DSM 19732 Lipid A core--O-antigen ligase-like protein YP_005047285.1 3272924 R 720554 CDS YP_005047286.1 374297095 11563229 complement(3274178..3275332) 1 NC_016627.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 3275332 11563229 Clocl_2813 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005047286.1 3274178 R 720554 CDS YP_005047287.1 374297096 11563230 complement(3275385..3276488) 1 NC_016627.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 3276488 11563230 Clocl_2814 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005047287.1 3275385 R 720554 CDS YP_005047288.1 374297097 11563231 complement(3276576..3277562) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 3277562 11563231 Clocl_2815 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005047288.1 3276576 R 720554 CDS YP_005047289.1 374297098 11563232 complement(3277576..3278775) 1 NC_016627.1 PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; coenzyme F420-reducing hydrogenase subunit beta 3278775 11563232 Clocl_2816 Clostridium clariflavum DSM 19732 coenzyme F420-reducing hydrogenase subunit beta YP_005047289.1 3277576 R 720554 CDS YP_005047290.1 374297099 11563233 complement(3278963..3280204) 1 NC_016627.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 3280204 11563233 Clocl_2817 Clostridium clariflavum DSM 19732 nucleotide sugar dehydrogenase YP_005047290.1 3278963 R 720554 CDS YP_005047291.1 374297100 11563234 complement(3281100..3281969) 1 NC_016627.1 hypothetical protein 3281969 11563234 Clocl_2818 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047291.1 3281100 R 720554 CDS YP_005047292.1 374297101 11563235 complement(3281994..3282821) 1 NC_016627.1 PFAM: CotH protein; CotH protein 3282821 11563235 Clocl_2819 Clostridium clariflavum DSM 19732 CotH protein YP_005047292.1 3281994 R 720554 CDS YP_005047293.1 374297102 11563236 complement(3282885..3284276) 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 3284276 11563236 Clocl_2820 Clostridium clariflavum DSM 19732 transposase family protein YP_005047293.1 3282885 R 720554 CDS YP_005047294.1 374297103 11563237 complement(3284399..3285967) 1 NC_016627.1 PFAM: CotH protein; CotH protein 3285967 11563237 Clocl_2821 Clostridium clariflavum DSM 19732 CotH protein YP_005047294.1 3284399 R 720554 CDS YP_005047295.1 374297104 11563238 complement(3286227..3287621) 1 NC_016627.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 3287621 11563238 Clocl_2822 Clostridium clariflavum DSM 19732 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_005047295.1 3286227 R 720554 CDS YP_005047296.1 374297105 11563239 complement(3288300..3289517) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3289517 11563239 Clocl_2823 Clostridium clariflavum DSM 19732 transposase YP_005047296.1 3288300 R 720554 CDS YP_005047297.1 374297106 11563240 complement(3289657..3290859) 1 NC_016627.1 PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; coenzyme F420-reducing hydrogenase subunit beta 3290859 11563240 Clocl_2824 Clostridium clariflavum DSM 19732 coenzyme F420-reducing hydrogenase subunit beta YP_005047297.1 3289657 R 720554 CDS YP_005047298.1 374297107 11563241 complement(3290991..3292121) 1 NC_016627.1 PFAM: Polysaccharide pyruvyl transferase; manually curated; Polysaccharide pyruvyl transferase 3292121 11563241 Clocl_2825 Clostridium clariflavum DSM 19732 Polysaccharide pyruvyl transferase YP_005047298.1 3290991 R 720554 CDS YP_005047299.1 374297108 11563242 complement(3293701..3294735) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 3294735 11563242 Clocl_2826 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005047299.1 3293701 R 720554 CDS YP_005047300.1 374297109 11563243 complement(3295008..3296183) 1 NC_016627.1 PFAM: Polysaccharide pyruvyl transferase; Polysaccharide pyruvyl transferase 3296183 11563243 Clocl_2827 Clostridium clariflavum DSM 19732 Polysaccharide pyruvyl transferase YP_005047300.1 3295008 R 720554 CDS YP_005047301.1 374297110 11563244 complement(3296202..3297299) 1 NC_016627.1 PFAM: Glycosyl transferases group 1; glycosyltransferase 3297299 11563244 Clocl_2828 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005047301.1 3296202 R 720554 CDS YP_005047302.1 374297111 11563245 complement(3297523..3298062) 1 NC_016627.1 PFAM: Transcription termination factor nusG; transcription antiterminator 3298062 11563245 Clocl_2829 Clostridium clariflavum DSM 19732 transcription antiterminator YP_005047302.1 3297523 R 720554 CDS YP_005047303.1 374297112 11563246 complement(3298230..3299108) 1 NC_016627.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 3299108 11563246 Clocl_2830 Clostridium clariflavum DSM 19732 glucose-1-phosphate thymidylyltransferase YP_005047303.1 3298230 R 720554 CDS YP_005047304.1 374297113 11563247 complement(3299145..3300005) 1 NC_016627.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 3300005 11563247 Clocl_2831 Clostridium clariflavum DSM 19732 dTDP-4-dehydrorhamnose reductase YP_005047304.1 3299145 R 720554 CDS YP_005047305.1 374297114 11563248 complement(3300002..3300607) 1 NC_016627.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 3300607 11563248 Clocl_2832 Clostridium clariflavum DSM 19732 dTDP-4-dehydrorhamnose 3,5-epimerase YP_005047305.1 3300002 R 720554 CDS YP_005047306.1 374297115 11563249 complement(3300683..3302083) 1 NC_016627.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide biosynthesis protein 3302083 11563249 Clocl_2833 Clostridium clariflavum DSM 19732 capsular exopolysaccharide biosynthesis protein YP_005047306.1 3300683 R 720554 CDS YP_005047307.1 374297116 11563250 complement(3302111..3302731) 1 NC_016627.1 hypothetical protein 3302731 11563250 Clocl_2834 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047307.1 3302111 R 720554 CDS YP_005047308.1 374297117 11563251 complement(3302808..3303596) 1 NC_016627.1 PFAM: PHP domain; manually curated; capsular polysaccharide biosynthesis protein 3303596 11563251 Clocl_2835 Clostridium clariflavum DSM 19732 capsular polysaccharide biosynthesis protein YP_005047308.1 3302808 R 720554 CDS YP_005047309.1 374297118 11563252 complement(3303856..3306027) 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 3306027 11563252 Clocl_2836 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005047309.1 3303856 R 720554 CDS YP_005047310.1 374297119 11563253 complement(3306416..3306760) 1 NC_016627.1 PFAM: HIT domain; HIT family hydrolase, diadenosine tetraphosphate hydrolase 3306760 11563253 Clocl_2837 Clostridium clariflavum DSM 19732 HIT family hydrolase, diadenosine tetraphosphate hydrolase YP_005047310.1 3306416 R 720554 CDS YP_005047311.1 374297120 11563254 complement(3306923..3309562) 1 NC_016627.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 3309562 11563254 Clocl_2838 Clostridium clariflavum DSM 19732 alanyl-tRNA synthetase YP_005047311.1 3306923 R 720554 CDS YP_005047312.1 374297121 11563255 complement(3309705..3310754) 1 NC_016627.1 PFAM: Domain of unknown function DUF20; putative permease 3310754 11563255 Clocl_2839 Clostridium clariflavum DSM 19732 putative permease YP_005047312.1 3309705 R 720554 CDS YP_005047313.1 374297122 11563256 complement(3310909..3311091) 1 NC_016627.1 hypothetical protein 3311091 11563256 Clocl_2840 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047313.1 3310909 R 720554 CDS YP_005047314.1 374297123 11563257 complement(3311140..3311679) 1 NC_016627.1 PFAM: PRC-barrel domain; hypothetical protein 3311679 11563257 Clocl_2841 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047314.1 3311140 R 720554 CDS YP_005047315.1 374297124 11563258 3312034..3313392 1 NC_016627.1 PFAM: Protein of unknown function (DUF1015); hypothetical protein 3313392 11563258 Clocl_2842 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047315.1 3312034 D 720554 CDS YP_005047316.1 374297125 11563259 complement(3313473..3315071) 1 NC_016627.1 PFAM: Cellulose binding domain; Cellulose binding domain-containing protein 3315071 11563259 Clocl_2843 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein YP_005047316.1 3313473 R 720554 CDS YP_005047317.1 374297126 11563260 complement(3315046..3315828) 1 NC_016627.1 TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma-I factor 3315828 11563260 Clocl_2844 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005047317.1 3315046 R 720554 CDS YP_005047318.1 374297127 11563261 complement(3316023..3318383) 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; manually curated; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 3318383 11563261 Clocl_2845 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005047318.1 3316023 R 720554 CDS YP_005047319.1 374297128 11563262 complement(3318644..3319318) 1 NC_016627.1 hypothetical protein 3319318 11563262 Clocl_2846 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047319.1 3318644 R 720554 CDS YP_005047320.1 374297129 11563263 3319538..3320191 1 NC_016627.1 PFAM: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 3320191 11563263 Clocl_2847 Clostridium clariflavum DSM 19732 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) YP_005047320.1 3319538 D 720554 CDS YP_005047321.1 374297130 11563264 complement(3320260..3320979) 1 NC_016627.1 PFAM: Zinc dependent phospholipase C; Zinc dependent phospholipase C 3320979 11563264 Clocl_2848 Clostridium clariflavum DSM 19732 Zinc dependent phospholipase C YP_005047321.1 3320260 R 720554 CDS YP_005047322.1 374297131 11563265 complement(3321246..3321449) 1 NC_016627.1 hypothetical protein 3321449 11563265 Clocl_2849 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047322.1 3321246 R 720554 CDS YP_005047323.1 374297132 11563266 3321866..3323155 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3323155 11563266 Clocl_2850 Clostridium clariflavum DSM 19732 transposase YP_005047323.1 3321866 D 720554 CDS YP_005047324.1 374297133 11563267 complement(3323377..3324255) 1 NC_016627.1 PFAM: Bacterial type II secretion system protein F domain; Flp pilus assembly protein TadC 3324255 11563267 Clocl_2851 Clostridium clariflavum DSM 19732 Flp pilus assembly protein TadC YP_005047324.1 3323377 R 720554 CDS YP_005047325.1 374297134 11563268 complement(3324267..3325088) 1 NC_016627.1 PFAM: Bacterial type II secretion system protein F domain; Flp pilus assembly protein TadB 3325088 11563268 Clocl_2852 Clostridium clariflavum DSM 19732 Flp pilus assembly protein TadB YP_005047325.1 3324267 R 720554 CDS YP_005047326.1 374297135 11563269 complement(3325076..3326314) 1 NC_016627.1 PFAM: Type II/IV secretion system protein; Flp pilus assembly protein, ATPase CpaF 3326314 11563269 Clocl_2853 Clostridium clariflavum DSM 19732 Flp pilus assembly protein, ATPase CpaF YP_005047326.1 3325076 R 720554 CDS YP_005047327.1 374297136 11563270 complement(3326331..3327443) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 3327443 11563270 Clocl_2854 Clostridium clariflavum DSM 19732 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein YP_005047327.1 3326331 R 720554 CDS YP_005047328.1 374297137 11563271 complement(3327624..3328232) 1 NC_016627.1 hypothetical protein 3328232 11563271 Clocl_2855 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047328.1 3327624 R 720554 CDS YP_005047329.1 374297138 11563272 3328710..3329141 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor 3329141 11563272 Clocl_2856 Clostridium clariflavum DSM 19732 anti-sigma regulatory factor YP_005047329.1 3328710 D 720554 CDS YP_005047330.1 374297139 11563273 complement(3329187..3330929) 1 NC_016627.1 PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase 3330929 11563273 Clocl_2857 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase YP_005047330.1 3329187 R 720554 CDS YP_005047331.1 374297140 11563274 complement(3331001..3332230) 1 NC_016627.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 3332230 11563274 Clocl_2858 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine carboxypeptidase YP_005047331.1 3331001 R 720554 CDS YP_005047332.1 374297141 11563275 3332486..3334072 1 NC_016627.1 PFAM: Protein of unknown function (DUF342); putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon 3334072 11563275 Clocl_2859 Clostridium clariflavum DSM 19732 putative polymerase with PALM domain, HD hydrolase domain and Zn ribbon YP_005047332.1 3332486 D 720554 CDS YP_005047333.1 374297142 11563276 3334447..3335685 1 NC_016627.1 PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase; manually curated; UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 3335685 11563276 Clocl_2860 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005047333.1 3334447 D 720554 CDS YP_005047334.1 374297143 11563277 3335834..3336040 1 NC_016627.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 3336040 11563277 Clocl_2861 Clostridium clariflavum DSM 19732 small, acid-soluble spore protein, alpha/beta type YP_005047334.1 3335834 D 720554 CDS YP_005047335.1 374297144 11563279 complement(3337741..3338412) 1 NC_016627.1 PFAM: TrkA-N domain; TrkA-C domain; K+ transport system, NAD-binding component 3338412 11563279 Clocl_2863 Clostridium clariflavum DSM 19732 K+ transport system, NAD-binding component YP_005047335.1 3337741 R 720554 CDS YP_005047336.1 374297145 11563280 complement(3338458..3339072) 1 NC_016627.1 PFAM: TrkA-N domain; K+ transport system, NAD-binding component 3339072 11563280 Clocl_2864 Clostridium clariflavum DSM 19732 K+ transport system, NAD-binding component YP_005047336.1 3338458 R 720554 CDS YP_005047337.1 374297146 11563281 3339451..3340164 1 NC_016627.1 PFAM: Protein of unknown function (DUF421); hypothetical protein 3340164 11563281 Clocl_2865 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047337.1 3339451 D 720554 CDS YP_005047338.1 374297147 11563282 3340166..3340555 1 NC_016627.1 hypothetical protein 3340555 11563282 Clocl_2866 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047338.1 3340166 D 720554 CDS YP_005047339.1 374297148 11563283 complement(3340569..3341567) 1 NC_016627.1 PFAM: Sodium/calcium exchanger protein; Ca2+/Na+ antiporter 3341567 11563283 Clocl_2867 Clostridium clariflavum DSM 19732 Ca2+/Na+ antiporter YP_005047339.1 3340569 R 720554 CDS YP_005047340.1 374297149 11563285 complement(3342383..3343264) 1 NC_016627.1 PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; hypothetical protein 3343264 11563285 Clocl_2869 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047340.1 3342383 R 720554 CDS YP_005047341.1 374297150 11563286 complement(3343341..3344462) 1 NC_016627.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; glucose-1-phosphate adenylyltransferase, GlgD subunit 3344462 11563286 Clocl_2870 Clostridium clariflavum DSM 19732 glucose-1-phosphate adenylyltransferase, GlgD subunit YP_005047341.1 3343341 R 720554 CDS YP_005047342.1 374297151 11563287 complement(3344459..3345739) 1 NC_016627.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 3345739 11563287 Clocl_2871 Clostridium clariflavum DSM 19732 glucose-1-phosphate adenylyltransferase YP_005047342.1 3344459 R 720554 CDS YP_005047343.1 374297152 11563288 complement(3346068..3347723) 1 NC_016627.1 PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 3347723 11563288 Clocl_2872 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005047343.1 3346068 R 720554 CDS YP_005047344.1 374297153 11563289 complement(3348074..3348304) 1 NC_016627.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB-family; Glutaredoxin-like protein, YruB-family 3348304 11563289 Clocl_2873 Clostridium clariflavum DSM 19732 Glutaredoxin-like protein, YruB-family YP_005047344.1 3348074 R 720554 CDS YP_005047345.1 374297154 11563290 complement(3348498..3348629) 1 NC_016627.1 hypothetical protein 3348629 11563290 Clocl_2874 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047345.1 3348498 R 720554 CDS YP_005047346.1 374297155 11563291 complement(3348690..3349217) 1 NC_016627.1 PFAM: Carbohydrate binding domain (family 25); Carbohydrate binding domain (family 25) 3349217 11563291 Clocl_2875 Clostridium clariflavum DSM 19732 Carbohydrate binding domain (family 25) YP_005047346.1 3348690 R 720554 CDS YP_005047347.1 374297156 11563292 complement(3349664..3350830) 1 NC_016627.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); methylase involved in ubiquinone/menaquinone biosynthesis 3350830 11563292 Clocl_2876 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005047347.1 3349664 R 720554 CDS YP_005047348.1 374297157 11563293 complement(3350850..3351602) 1 NC_016627.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase family protein 3351602 11563293 Clocl_2877 Clostridium clariflavum DSM 19732 pseudouridine synthase family protein YP_005047348.1 3350850 R 720554 CDS YP_005047349.1 374297158 11563294 complement(3351628..3352998) 1 NC_016627.1 PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; NOL1/NOP2/sun family putative RNA methylase 3352998 11563294 Clocl_2878 Clostridium clariflavum DSM 19732 NOL1/NOP2/sun family putative RNA methylase YP_005047349.1 3351628 R 720554 CDS YP_005047350.1 374297159 11563295 3353408..3354652 1 NC_016627.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 3354652 11563295 Clocl_2879 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005047350.1 3353408 D 720554 CDS YP_005047351.1 374297160 11563296 complement(3354809..3355543) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase, beta-lactamase superfamily III 3355543 11563296 Clocl_2880 Clostridium clariflavum DSM 19732 metal-dependent hydrolase, beta-lactamase superfamily III YP_005047351.1 3354809 R 720554 CDS YP_005047352.1 374297161 11563297 complement(3355575..3356129) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1393); hypothetical protein 3356129 11563297 Clocl_2881 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047352.1 3355575 R 720554 CDS YP_005047353.1 374297162 11563298 complement(3356235..3356825) 1 NC_016627.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase; alpha-ribazole phosphatase 3356825 11563298 Clocl_2882 Clostridium clariflavum DSM 19732 alpha-ribazole phosphatase YP_005047353.1 3356235 R 720554 CDS YP_005047354.1 374297163 11563299 complement(3356848..3357600) 1 NC_016627.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin-5'-phosphate synthase 3357600 11563299 Clocl_2883 Clostridium clariflavum DSM 19732 cobalamin-5'-phosphate synthase YP_005047354.1 3356848 R 720554 CDS YP_005047355.1 374297164 11563300 complement(3357646..3358203) 1 NC_016627.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; adenosyl cobinamide kinase 3358203 11563300 Clocl_2884 Clostridium clariflavum DSM 19732 adenosyl cobinamide kinase YP_005047355.1 3357646 R 720554 CDS YP_005047356.1 374297165 11563301 complement(3358270..3359322) 1 NC_016627.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein cobD/CbiB 3359322 11563301 Clocl_2885 Clostridium clariflavum DSM 19732 cobalamin biosynthesis protein cobD/CbiB YP_005047356.1 3358270 R 720554 CDS YP_005047357.1 374297166 11563302 complement(3359786..3361135) 1 NC_016627.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase 3361135 11563302 Clocl_2886 Clostridium clariflavum DSM 19732 aspartate kinase YP_005047357.1 3359786 R 720554 CDS YP_005047358.1 374297167 11563303 complement(3361208..3362455) 1 NC_016627.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; homoserine dehydrogenase 3362455 11563303 Clocl_2887 Clostridium clariflavum DSM 19732 homoserine dehydrogenase YP_005047358.1 3361208 R 720554 CDS YP_005047359.1 374297168 11563304 complement(3362470..3362913) 1 NC_016627.1 ACT domain-containing protein 3362913 11563304 Clocl_2888 Clostridium clariflavum DSM 19732 ACT domain-containing protein YP_005047359.1 3362470 R 720554 CDS YP_005047360.1 374297169 11563305 complement(3363153..3364661) 1 NC_016627.1 PFAM: Domain of unknown function (DUF3369); HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; hypothetical protein 3364661 11563305 Clocl_2889 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047360.1 3363153 R 720554 CDS YP_005047361.1 374297170 11563306 3365042..3366130 1 NC_016627.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; putative dehydrogenase 3366130 11563306 Clocl_2890 Clostridium clariflavum DSM 19732 putative dehydrogenase YP_005047361.1 3365042 D 720554 CDS YP_005047362.1 374297171 11563307 complement(3366176..3366538) 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 3366538 11563307 Clocl_2891 Clostridium clariflavum DSM 19732 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain YP_005047362.1 3366176 R 720554 CDS YP_005047363.1 374297172 11563308 complement(3366723..3368222) 1 NC_016627.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; L-threonine synthase 3368222 11563308 Clocl_2892 Clostridium clariflavum DSM 19732 L-threonine synthase YP_005047363.1 3366723 R 720554 CDS YP_005047364.1 374297173 11563309 complement(3368576..3369697) 1 NC_016627.1 PFAM: Patatin-like phospholipase; putative esterase of the alpha-beta hydrolase superfamily 3369697 11563309 Clocl_2893 Clostridium clariflavum DSM 19732 putative esterase of the alpha-beta hydrolase superfamily YP_005047364.1 3368576 R 720554 CDS YP_005047365.1 374297174 11563310 complement(3369771..3370544) 1 NC_016627.1 serine/threonine protein phosphatase 3370544 11563310 Clocl_2894 Clostridium clariflavum DSM 19732 serine/threonine protein phosphatase YP_005047365.1 3369771 R 720554 CDS YP_005047366.1 374297175 11563311 complement(3370608..3371276) 1 NC_016627.1 PFAM: Type IV leader peptidase family; prepilin signal peptidase PulO-like peptidase 3371276 11563311 Clocl_2895 Clostridium clariflavum DSM 19732 prepilin signal peptidase PulO-like peptidase YP_005047366.1 3370608 R 720554 CDS YP_005047367.1 374297176 11563312 3371859..3372887 1 NC_016627.1 replication restart DNA helicase PriA 3372887 11563312 Clocl_2896 Clostridium clariflavum DSM 19732 replication restart DNA helicase PriA YP_005047367.1 3371859 D 720554 CDS YP_005047368.1 374297177 11563313 3372880..3373722 1 NC_016627.1 PFAM: Domain of unknown function (DUF477); beta-propeller domain-containing protein, methanol dehydrogenase 3373722 11563313 Clocl_2897 Clostridium clariflavum DSM 19732 beta-propeller domain-containing protein, methanol dehydrogenase YP_005047368.1 3372880 D 720554 CDS YP_005047369.1 374297178 11563314 complement(3373855..3374328) 1 NC_016627.1 hypothetical protein 3374328 11563314 Clocl_2898 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047369.1 3373855 R 720554 CDS YP_005047370.1 374297179 11563315 complement(3374428..3375546) 1 NC_016627.1 PFAM: Acyltransferase family; manually curated; hypothetical protein 3375546 11563315 Clocl_2899 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047370.1 3374428 R 720554 CDS YP_005047371.1 374297180 11563316 3375714..3376451 1 NC_016627.1 PFAM: YhhN-like protein; YjeF-like protein 3376451 11563316 Clocl_2900 Clostridium clariflavum DSM 19732 YjeF-like protein YP_005047371.1 3375714 D 720554 CDS YP_005047372.1 374297181 11563317 complement(3376546..3377070) 1 NC_016627.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 3377070 11563317 Clocl_2901 Clostridium clariflavum DSM 19732 3-isopropylmalate dehydratase small subunit YP_005047372.1 3376546 R 720554 CDS YP_005047373.1 374297182 11563318 complement(3377115..3378401) 1 NC_016627.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein; homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit 3378401 11563318 Clocl_2902 Clostridium clariflavum DSM 19732 homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit YP_005047373.1 3377115 R 720554 CDS YP_005047374.1 374297183 11563319 complement(3378673..3379428) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1266); hypothetical protein 3379428 11563319 Clocl_2903 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047374.1 3378673 R 720554 CDS YP_005047375.1 374297184 11563320 complement(3379481..3380782) 1 NC_016627.1 PFAM: DnaJ domain; Tetratricopeptide repeat; manually curated; DnaJ-class molecular chaperone with C-terminal Zn finger domain 3380782 11563320 Clocl_2904 Clostridium clariflavum DSM 19732 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005047375.1 3379481 R 720554 CDS YP_005047376.1 374297185 11563321 complement(3380787..3382484) 1 NC_016627.1 PFAM: Hsp70 protein; molecular chaperone 3382484 11563321 Clocl_2905 Clostridium clariflavum DSM 19732 molecular chaperone YP_005047376.1 3380787 R 720554 CDS YP_005047377.1 374297186 11563322 complement(3382629..3383330) 1 NC_016627.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 3383330 11563322 Clocl_2906 Clostridium clariflavum DSM 19732 sugar fermentation stimulation protein YP_005047377.1 3382629 R 720554 CDS YP_005047378.1 374297187 11563323 complement(3383353..3383535) 1 NC_016627.1 hypothetical protein 3383535 11563323 Clocl_2907 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047378.1 3383353 R 720554 CDS YP_005047379.1 374297188 11563324 complement(3383595..3384095) 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase 3384095 11563324 Clocl_2908 Clostridium clariflavum DSM 19732 nitroreductase YP_005047379.1 3383595 R 720554 CDS YP_005047380.1 374297189 11563325 complement(3384287..3384808) 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase 3384808 11563325 Clocl_2909 Clostridium clariflavum DSM 19732 nitroreductase YP_005047380.1 3384287 R 720554 CDS YP_005047381.1 374297190 11563326 complement(3384842..3385303) 1 NC_016627.1 PFAM: VanZ like family; glycopeptide antibiotics resistance protein 3385303 11563326 Clocl_2910 Clostridium clariflavum DSM 19732 glycopeptide antibiotics resistance protein YP_005047381.1 3384842 R 720554 CDS YP_005047382.1 374297191 11563327 3385509..3385988 1 NC_016627.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; Mn-dependent transcriptional regulator 3385988 11563327 Clocl_2911 Clostridium clariflavum DSM 19732 Mn-dependent transcriptional regulator YP_005047382.1 3385509 D 720554 CDS YP_005047383.1 374297192 11563328 complement(3386358..3388253) 1 NC_016627.1 hypothetical protein 3388253 11563328 Clocl_2912 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047383.1 3386358 R 720554 CDS YP_005047384.1 374297193 11563329 complement(3388295..3389035) 1 NC_016627.1 hypothetical protein 3389035 11563329 Clocl_2913 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047384.1 3388295 R 720554 CDS YP_005047385.1 374297194 11563330 complement(3389155..3390165) 1 NC_016627.1 hypothetical protein 3390165 11563330 Clocl_2914 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047385.1 3389155 R 720554 CDS YP_005047386.1 374297195 11563331 complement(3390247..3391713) 1 NC_016627.1 hypothetical protein 3391713 11563331 Clocl_2915 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047386.1 3390247 R 720554 CDS YP_005047387.1 374297196 11563332 3392192..3392815 1 NC_016627.1 hypothetical protein 3392815 11563332 Clocl_2916 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047387.1 3392192 D 720554 CDS YP_005047388.1 374297197 11563333 3392920..3393465 1 NC_016627.1 hypothetical protein 3393465 11563333 Clocl_2917 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047388.1 3392920 D 720554 CDS YP_005047389.1 374297198 11563334 3393411..3393656 1 NC_016627.1 hypothetical protein 3393656 11563334 Clocl_2918 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047389.1 3393411 D 720554 CDS YP_005047390.1 374297199 11563335 complement(3393881..3394441) 1 NC_016627.1 PFAM: Rubrerythrin; rubrerythrin 3394441 11563335 Clocl_2919 Clostridium clariflavum DSM 19732 rubrerythrin YP_005047390.1 3393881 R 720554 CDS YP_005047391.1 374297200 11563336 3394610..3395419 1 NC_016627.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 3395419 11563336 Clocl_2920 Clostridium clariflavum DSM 19732 glucosamine-6-phosphate isomerase YP_005047391.1 3394610 D 720554 CDS YP_005047392.1 374297201 11563337 complement(3395416..3396315) 1 NC_016627.1 hypothetical protein 3396315 11563337 Clocl_2921 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047392.1 3395416 R 720554 CDS YP_005047393.1 374297202 11563338 complement(3396454..3397266) 1 NC_016627.1 hypothetical protein 3397266 11563338 Clocl_2922 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047393.1 3396454 R 720554 CDS YP_005047394.1 374297203 11563339 complement(3397387..3398427) 1 NC_016627.1 hypothetical protein 3398427 11563339 Clocl_2923 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047394.1 3397387 R 720554 CDS YP_005047395.1 374297204 11563340 complement(3398520..3398957) 1 NC_016627.1 hypothetical protein 3398957 11563340 Clocl_2924 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047395.1 3398520 R 720554 CDS YP_005047396.1 374297205 11563341 complement(3398998..3402633) 1 NC_016627.1 PFAM: Eco57I restriction endonuclease; manually curated; Eco57I restriction endonuclease 3402633 11563341 Clocl_2925 Clostridium clariflavum DSM 19732 Eco57I restriction endonuclease YP_005047396.1 3398998 R 720554 CDS YP_005047397.1 374297206 11563342 complement(3402819..3403574) 1 NC_016627.1 hypothetical protein 3403574 11563342 Clocl_2926 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047397.1 3402819 R 720554 CDS YP_005047398.1 374297207 11563343 complement(3403686..3404522) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1848); hypothetical protein 3404522 11563343 Clocl_2927 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047398.1 3403686 R 720554 CDS YP_005047399.1 374297208 11563344 complement(3404926..3405177) 1 NC_016627.1 hypothetical protein 3405177 11563344 Clocl_2928 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047399.1 3404926 R 720554 CDS YP_005047400.1 374297209 11563345 complement(3405726..3407756) 1 NC_016627.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein; hypothetical protein 3407756 11563345 Clocl_2929 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047400.1 3405726 R 720554 CDS YP_005047401.1 374297210 11563346 complement(3407769..3410327) 1 NC_016627.1 PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein; hypothetical protein 3410327 11563346 Clocl_2930 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047401.1 3407769 R 720554 CDS YP_005047402.1 374297211 11563347 complement(3410383..3411543) 1 NC_016627.1 PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain 3411543 11563347 Clocl_2931 Clostridium clariflavum DSM 19732 putative transcriptional regulator with HTH domain YP_005047402.1 3410383 R 720554 CDS YP_005047403.1 374297212 11563348 complement(3411561..3415223) 1 NC_016627.1 PFAM: Eco57I restriction endonuclease; Eco57I restriction endonuclease 3415223 11563348 Clocl_2932 Clostridium clariflavum DSM 19732 Eco57I restriction endonuclease YP_005047403.1 3411561 R 720554 CDS YP_005047404.1 374297213 11563349 complement(3415236..3418796) 1 NC_016627.1 hypothetical protein 3418796 11563349 Clocl_2933 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047404.1 3415236 R 720554 CDS YP_005047405.1 374297214 11563350 complement(3418833..3419417) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1788); hypothetical protein 3419417 11563350 Clocl_2934 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047405.1 3418833 R 720554 CDS YP_005047406.1 374297215 11563351 complement(3419418..3420023) 1 NC_016627.1 PFAM: Putative inner membrane protein (DUF1819); hypothetical protein 3420023 11563351 Clocl_2935 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047406.1 3419418 R 720554 CDS YP_005047407.1 374297216 11563352 complement(3420154..3421020) 1 NC_016627.1 PFAM: HNH endonuclease; putative restriction endonuclease 3421020 11563352 Clocl_2936 Clostridium clariflavum DSM 19732 putative restriction endonuclease YP_005047407.1 3420154 R 720554 CDS YP_005047408.1 374297217 11563353 complement(3421758..3422405) 1 NC_016627.1 PFAM: LysE type translocator; putative threonine efflux protein 3422405 11563353 Clocl_2937 Clostridium clariflavum DSM 19732 putative threonine efflux protein YP_005047408.1 3421758 R 720554 CDS YP_005047409.1 374297218 11563354 complement(3422658..3423989) 1 NC_016627.1 PFAM: Serine hydroxymethyltransferase; glycine/serine hydroxymethyltransferase 3423989 11563354 Clocl_2938 Clostridium clariflavum DSM 19732 glycine/serine hydroxymethyltransferase YP_005047409.1 3422658 R 720554 CDS YP_005047410.1 374297219 11563355 complement(3424357..3424989) 1 NC_016627.1 hypothetical protein 3424989 11563355 Clocl_2939 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047410.1 3424357 R 720554 CDS YP_005047411.1 374297220 11563357 complement(3425449..3426030) 1 NC_016627.1 hypothetical protein 3426030 11563357 Clocl_2941 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047411.1 3425449 R 720554 CDS YP_005047412.1 374297221 11563358 complement(3426152..3427324) 1 NC_016627.1 PFAM: Sodium/hydrogen exchanger family; NhaP-type Na+(K+)/H+ antiporter 3427324 11563358 Clocl_2942 Clostridium clariflavum DSM 19732 NhaP-type Na+(K+)/H+ antiporter YP_005047412.1 3426152 R 720554 CDS YP_005047413.1 374297222 11563359 complement(3427579..3429771) 1 NC_016627.1 hypothetical protein 3429771 11563359 Clocl_2943 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047413.1 3427579 R 720554 CDS YP_005047414.1 374297223 11563360 complement(3429797..3434074) 1 NC_016627.1 PFAM: von Willebrand factor type A domain; S-layer homology domain; Mg-chelatase subunit ChlD 3434074 11563360 Clocl_2944 Clostridium clariflavum DSM 19732 Mg-chelatase subunit ChlD YP_005047414.1 3429797 R 720554 CDS YP_005047415.1 374297224 11563362 complement(3439038..3440777) 1 NC_016627.1 hypothetical protein 3440777 11563362 Clocl_2946 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047415.1 3439038 R 720554 CDS YP_005047416.1 374297225 11563364 complement(3442524..3443408) 1 NC_016627.1 PFAM: Mu transposase, C-terminal; manually curated; Mu transposase, C-terminal 3443408 11563364 Clocl_2948 Clostridium clariflavum DSM 19732 Mu transposase, C-terminal YP_005047416.1 3442524 R 720554 CDS YP_005047417.1 374297226 11563365 complement(3443423..3444688) 1 NC_016627.1 PFAM: Integrase core domain; integrase family protein 3444688 11563365 Clocl_2949 Clostridium clariflavum DSM 19732 integrase family protein YP_005047417.1 3443423 R 720554 CDS YP_005047418.1 374297227 11563366 complement(3444685..3445530) 1 NC_016627.1 PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal; TnsA endonuclease 3445530 11563366 Clocl_2950 Clostridium clariflavum DSM 19732 TnsA endonuclease YP_005047418.1 3444685 R 720554 CDS YP_005047419.1 374297228 11563367 3445836..3446051 1 NC_016627.1 hypothetical protein 3446051 11563367 Clocl_2951 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047419.1 3445836 D 720554 CDS YP_005047420.1 374297229 11563368 complement(3446095..3446964) 1 NC_016627.1 hypothetical protein 3446964 11563368 Clocl_2952 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047420.1 3446095 R 720554 CDS YP_005047421.1 374297230 11563369 complement(3446961..3447755) 1 NC_016627.1 hypothetical protein 3447755 11563369 Clocl_2953 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047421.1 3446961 R 720554 CDS YP_005047422.1 374297231 11563370 complement(3447769..3448143) 1 NC_016627.1 hypothetical protein 3448143 11563370 Clocl_2954 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047422.1 3447769 R 720554 CDS YP_005047423.1 374297232 11563373 3450437..3451213 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 3451213 11563373 Clocl_2957 Clostridium clariflavum DSM 19732 DNA replication protein YP_005047423.1 3450437 D 720554 CDS YP_005047424.1 374297233 11563375 3451798..3453087 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3453087 11563375 Clocl_2959 Clostridium clariflavum DSM 19732 transposase YP_005047424.1 3451798 D 720554 CDS YP_005047425.1 374297234 11563377 3454657..3456048 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 3456048 11563377 Clocl_2961 Clostridium clariflavum DSM 19732 transposase family protein YP_005047425.1 3454657 D 720554 CDS YP_005047426.1 374297235 11563378 complement(3456694..3457923) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3457923 11563378 Clocl_2962 Clostridium clariflavum DSM 19732 transposase YP_005047426.1 3456694 R 720554 CDS YP_005047427.1 374297236 11563380 complement(3459603..3460820) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3460820 11563380 Clocl_2964 Clostridium clariflavum DSM 19732 transposase YP_005047427.1 3459603 R 720554 CDS YP_005047428.1 374297237 11563381 complement(3460900..3461169) 1 NC_016627.1 hypothetical protein 3461169 11563381 Clocl_2965 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047428.1 3460900 R 720554 CDS YP_005047429.1 374297238 11563382 complement(3461174..3462082) 1 NC_016627.1 PFAM: StbA protein; actin-like ATPase involved in cell division 3462082 11563382 Clocl_2966 Clostridium clariflavum DSM 19732 actin-like ATPase involved in cell division YP_005047429.1 3461174 R 720554 CDS YP_005047430.1 374297239 11563383 complement(3462343..3463965) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 3463965 11563383 Clocl_2967 Clostridium clariflavum DSM 19732 transposase YP_005047430.1 3462343 R 720554 CDS YP_005047431.1 374297240 11563384 3464479..3464883 1 NC_016627.1 PFAM: S23 ribosomal protein; S23 ribosomal protein 3464883 11563384 Clocl_2968 Clostridium clariflavum DSM 19732 S23 ribosomal protein YP_005047431.1 3464479 D 720554 CDS YP_005047432.1 374297241 11563385 complement(3465180..3465743) 1 NC_016627.1 PFAM: Protein of unknown function (DUF2703); hypothetical protein 3465743 11563385 Clocl_2969 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047432.1 3465180 R 720554 CDS YP_005047433.1 374297242 11563386 complement(3465857..3466084) 1 NC_016627.1 TIGRFAM: small redox-active disulfide protein 2; small redox-active disulfide protein 2 3466084 11563386 Clocl_2970 Clostridium clariflavum DSM 19732 small redox-active disulfide protein 2 YP_005047433.1 3465857 R 720554 CDS YP_005047434.1 374297243 11563387 complement(3466207..3467223) 1 NC_016627.1 PFAM: Predicted permease; manually curated; putative permease 3467223 11563387 Clocl_2971 Clostridium clariflavum DSM 19732 putative permease YP_005047434.1 3466207 R 720554 CDS YP_005047435.1 374297244 11563388 complement(3467332..3467733) 1 NC_016627.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein-tyrosine-phosphatase 3467733 11563388 Clocl_2972 Clostridium clariflavum DSM 19732 protein-tyrosine-phosphatase YP_005047435.1 3467332 R 720554 CDS YP_005047436.1 374297245 11563389 complement(3467739..3468815) 1 NC_016627.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein 3468815 11563389 Clocl_2973 Clostridium clariflavum DSM 19732 arsenical-resistance protein YP_005047436.1 3467739 R 720554 CDS YP_005047437.1 374297246 11563390 complement(3469004..3469414) 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; manually curated; putative transcriptional regulator 3469414 11563390 Clocl_2974 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047437.1 3469004 R 720554 CDS YP_005047438.1 374297247 11563391 complement(3469878..3470033) 1 NC_016627.1 hypothetical protein 3470033 11563391 Clocl_2975 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047438.1 3469878 R 720554 CDS YP_005047439.1 374297248 11563392 complement(3470280..3471137) 1 NC_016627.1 hypothetical protein 3471137 11563392 Clocl_2976 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047439.1 3470280 R 720554 CDS YP_005047440.1 374297249 11563393 complement(3471174..3471617) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1232); hypothetical protein 3471617 11563393 Clocl_2977 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047440.1 3471174 R 720554 CDS YP_005047441.1 374297250 11563394 complement(3471686..3472258) 1 NC_016627.1 PFAM: BFD-like [2Fe-2S] binding domain; BFD-like (2Fe-2S) protein 3472258 11563394 Clocl_2978 Clostridium clariflavum DSM 19732 BFD-like (2Fe-2S) protein YP_005047441.1 3471686 R 720554 CDS YP_005047442.1 374297251 11563395 complement(3473129..3474952) 1 NC_016627.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase 3474952 11563395 Clocl_2979 Clostridium clariflavum DSM 19732 glucosamine--fructose-6-phosphate aminotransferase YP_005047442.1 3473129 R 720554 CDS YP_005047443.1 374297252 11563396 complement(3475796..3477190) 1 NC_016627.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; phosphoglucosamine mutase 3477190 11563396 Clocl_2980 Clostridium clariflavum DSM 19732 phosphoglucosamine mutase YP_005047443.1 3475796 R 720554 CDS YP_005047444.1 374297253 11563397 complement(3477532..3479118) 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; FAD-dependent dehydrogenase 3479118 11563397 Clocl_2981 Clostridium clariflavum DSM 19732 FAD-dependent dehydrogenase YP_005047444.1 3477532 R 720554 CDS YP_005047445.1 374297254 11563398 complement(3479128..3480342) 1 NC_016627.1 PFAM: YbbR-like protein; hypothetical protein 3480342 11563398 Clocl_2982 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047445.1 3479128 R 720554 CDS YP_005047446.1 374297255 11563399 complement(3480339..3481268) 1 NC_016627.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; hypothetical protein 3481268 11563399 Clocl_2983 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047446.1 3480339 R 720554 CDS YP_005047447.1 374297256 11563400 complement(3481482..3482372) 1 NC_016627.1 PFAM: Radical SAM superfamily; pyruvate-formate lyase-activating enzyme 3482372 11563400 Clocl_2984 Clostridium clariflavum DSM 19732 pyruvate-formate lyase-activating enzyme YP_005047447.1 3481482 R 720554 CDS YP_005047448.1 374297257 11563401 complement(3482353..3483753) 1 NC_016627.1 PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family; manually curated; hypothetical protein 3483753 11563401 Clocl_2985 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047448.1 3482353 R 720554 CDS YP_005047449.1 374297258 11563402 complement(3484655..3484813) 1 NC_016627.1 hypothetical protein 3484813 11563402 Clocl_2987 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047449.1 3484655 R 720554 CDS YP_005047450.1 374297259 11563403 complement(3484818..3486968) 1 NC_016627.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transporter FeoB 3486968 11563403 Clocl_2988 Clostridium clariflavum DSM 19732 ferrous iron transporter FeoB YP_005047450.1 3484818 R 720554 CDS YP_005047451.1 374297260 11563404 complement(3487132..3487353) 1 NC_016627.1 PFAM: FeoA domain; Fe2+ transport system protein A 3487353 11563404 Clocl_2989 Clostridium clariflavum DSM 19732 Fe2+ transport system protein A YP_005047451.1 3487132 R 720554 CDS YP_005047452.1 374297261 11563405 3487725..3488111 1 NC_016627.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; Mn-dependent transcriptional regulator 3488111 11563405 Clocl_2990 Clostridium clariflavum DSM 19732 Mn-dependent transcriptional regulator YP_005047452.1 3487725 D 720554 CDS YP_005047453.1 374297262 11563406 complement(3488285..3489403) 1 NC_016627.1 beta-lactamase class A 3489403 11563406 Clocl_2991 Clostridium clariflavum DSM 19732 beta-lactamase class A YP_005047453.1 3488285 R 720554 CDS YP_005047454.1 374297263 11563407 complement(3489475..3489804) 1 NC_016627.1 PFAM: Protein of unknown function (DUF970); hypothetical protein 3489804 11563407 Clocl_2992 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047454.1 3489475 R 720554 CDS YP_005047455.1 374297264 11563408 complement(3489893..3491143) 1 NC_016627.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase 3491143 11563408 Clocl_2993 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine carboxypeptidase YP_005047455.1 3489893 R 720554 CDS YP_005047456.1 374297265 11563409 3491524..3491685 1 NC_016627.1 hypothetical protein 3491685 11563409 Clocl_2994 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047456.1 3491524 D 720554 CDS YP_005047457.1 374297266 11563410 complement(3491796..3492413) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 3492413 11563410 Clocl_2995 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005047457.1 3491796 R 720554 CDS YP_005047458.1 374297267 11563411 3492675..3493508 1 NC_016627.1 PFAM: Uncharacterised ACR, YagE family COG1723; hypothetical protein 3493508 11563411 Clocl_2996 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047458.1 3492675 D 720554 CDS YP_005047459.1 374297268 11563412 3493522..3494385 1 NC_016627.1 PFAM: Uncharacterised ACR, YagE family COG1723; hypothetical protein 3494385 11563412 Clocl_2997 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047459.1 3493522 D 720554 CDS YP_005047460.1 374297269 11563413 complement(3494465..3494650) 1 NC_016627.1 PFAM: Small acid-soluble spore protein H family; TIGRFAM: small acid-soluble spore protein, H-type; small acid-soluble spore protein, H-type 3494650 11563413 Clocl_2998 Clostridium clariflavum DSM 19732 small acid-soluble spore protein, H-type YP_005047460.1 3494465 R 720554 CDS YP_005047461.1 374297270 11563414 complement(3495377..3495769) 1 NC_016627.1 hypothetical protein 3495769 11563414 Clocl_2999 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047461.1 3495377 R 720554 CDS YP_005047462.1 374297271 11563415 3496144..3497013 1 NC_016627.1 hypothetical protein 3497013 11563415 Clocl_3000 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047462.1 3496144 D 720554 CDS YP_005047463.1 374297272 11563416 complement(3497149..3499980) 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; Cellulose binding domain-containing protein,dockerin-like protein 3499980 11563416 Clocl_3001 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein,dockerin-like protein YP_005047463.1 3497149 R 720554 CDS YP_005047464.1 374297273 11563417 3500244..3501173 1 NC_016627.1 PFAM: Methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 3501173 11563417 Clocl_3002 Clostridium clariflavum DSM 19732 5,10-methylenetetrahydrofolate reductase YP_005047464.1 3500244 D 720554 CDS YP_005047465.1 374297274 11563419 complement(3502878..3504275) 1 NC_016627.1 PFAM: Glucuronate isomerase; glucuronate isomerase 3504275 11563419 Clocl_3004 Clostridium clariflavum DSM 19732 glucuronate isomerase YP_005047465.1 3502878 R 720554 CDS YP_005047466.1 374297275 11563420 complement(3504557..3505411) 1 NC_016627.1 hypothetical protein 3505411 11563420 Clocl_3005 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047466.1 3504557 R 720554 CDS YP_005047467.1 374297276 11563421 complement(3505769..3508774) 1 NC_016627.1 PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); S-layer homology domain; TIGRFAM: Listeria/Bacterioides repeat; beta-propeller domain-containing protein, methanol dehydrogenase 3508774 11563421 Clocl_3006 Clostridium clariflavum DSM 19732 beta-propeller domain-containing protein, methanol dehydrogenase YP_005047467.1 3505769 R 720554 CDS YP_005047468.1 374297277 11563424 complement(3510715..3511278) 1 NC_016627.1 hypothetical protein 3511278 11563424 Clocl_3009 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047468.1 3510715 R 720554 CDS YP_005047469.1 374297278 11563425 complement(3511655..3512965) 1 NC_016627.1 PFAM: Amidohydrolase family; cytosine deaminase 3512965 11563425 Clocl_3010 Clostridium clariflavum DSM 19732 cytosine deaminase YP_005047469.1 3511655 R 720554 CDS YP_005047470.1 374297279 11563426 complement(3513060..3514304) 1 NC_016627.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase 3514304 11563426 Clocl_3011 Clostridium clariflavum DSM 19732 adenosylhomocysteinase YP_005047470.1 3513060 R 720554 CDS YP_005047471.1 374297280 11563427 complement(3514349..3515173) 1 NC_016627.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I 3515173 11563427 Clocl_3012 Clostridium clariflavum DSM 19732 purine nucleoside phosphorylase I YP_005047471.1 3514349 R 720554 CDS YP_005047472.1 374297281 11563428 complement(3515553..3517091) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 3517091 11563428 Clocl_3013 Clostridium clariflavum DSM 19732 transposase YP_005047472.1 3515553 R 720554 CDS YP_005047473.1 374297282 11563429 complement(3517304..3518692) 1 NC_016627.1 PFAM: SpoVR like protein; hypothetical protein 3518692 11563429 Clocl_3014 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047473.1 3517304 R 720554 CDS YP_005047474.1 374297283 11563430 complement(3518733..3519941) 1 NC_016627.1 PFAM: Protein of unknown function (DUF444); TIGRFAM: sporulation protein YhbH; sporulation protein YhbH 3519941 11563430 Clocl_3015 Clostridium clariflavum DSM 19732 sporulation protein YhbH YP_005047474.1 3518733 R 720554 CDS YP_005047475.1 374297284 11563431 complement(3519984..3521912) 1 NC_016627.1 PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain; putative Ser protein kinase 3521912 11563431 Clocl_3016 Clostridium clariflavum DSM 19732 putative Ser protein kinase YP_005047475.1 3519984 R 720554 CDS YP_005047476.1 374297285 11563432 3522695..3524458 1 NC_016627.1 hypothetical protein 3524458 11563432 Clocl_3017 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047476.1 3522695 D 720554 CDS YP_005047477.1 374297286 11563433 3524551..3525246 1 NC_016627.1 hypothetical protein 3525246 11563433 Clocl_3018 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047477.1 3524551 D 720554 CDS YP_005047478.1 374297287 11563434 complement(3525360..3526388) 1 NC_016627.1 manually curated; hypothetical protein 3526388 11563434 Clocl_3019 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047478.1 3525360 R 720554 CDS YP_005047479.1 374297288 11563435 complement(3526783..3527157) 1 NC_016627.1 PFAM: Sulfite exporter TauE/SafE; putative permease 3527157 11563435 Clocl_3020 Clostridium clariflavum DSM 19732 putative permease YP_005047479.1 3526783 R 720554 CDS YP_005047480.1 374297289 11563436 complement(3527171..3527524) 1 NC_016627.1 PFAM: Sulfite exporter TauE/SafE; putative permease 3527524 11563436 Clocl_3021 Clostridium clariflavum DSM 19732 putative permease YP_005047480.1 3527171 R 720554 CDS YP_005047481.1 374297290 11563437 3527850..3528149 1 NC_016627.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; hypothetical protein 3528149 11563437 Clocl_3022 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047481.1 3527850 D 720554 CDS YP_005047482.1 374297291 11563438 3528417..3530681 1 NC_016627.1 PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; ATP-dependent Clp protease ATP-binding subunit ClpA 3530681 11563438 Clocl_3023 Clostridium clariflavum DSM 19732 ATP-dependent Clp protease ATP-binding subunit ClpA YP_005047482.1 3528417 D 720554 CDS YP_005047483.1 374297292 11563439 3530689..3531360 1 NC_016627.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 3531360 11563439 Clocl_3024 Clostridium clariflavum DSM 19732 leucyl/phenylalanyl-tRNA--protein transferase YP_005047483.1 3530689 D 720554 CDS YP_005047484.1 374297293 11563440 3531361..3532461 1 NC_016627.1 hypothetical protein 3532461 11563440 Clocl_3025 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047484.1 3531361 D 720554 CDS YP_005047485.1 374297294 11563441 complement(3532929..3533795) 1 NC_016627.1 manually curated; hypothetical protein 3533795 11563441 Clocl_3026 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047485.1 3532929 R 720554 CDS YP_005047486.1 374297295 11563442 complement(3534034..3534582) 1 NC_016627.1 hypothetical protein 3534582 11563442 Clocl_3027 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047486.1 3534034 R 720554 CDS YP_005047487.1 374297296 11563443 complement(3535111..3543876) 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2329); Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family; cellobiose phosphorylase 3543876 11563443 Clocl_3028 Clostridium clariflavum DSM 19732 cellobiose phosphorylase YP_005047487.1 3535111 R 720554 CDS YP_005047488.1 374297297 11563444 complement(3544172..3546667) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; N-terminal ig-like domain of cellulase; dockerin-like protein 3546667 11563444 Clocl_3029 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005047488.1 3544172 R 720554 CDS YP_005047489.1 374297298 11563445 complement(3546975..3547778) 1 NC_016627.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; manually curated; rRNA methylase, putative, group 3 3547778 11563445 Clocl_3030 Clostridium clariflavum DSM 19732 rRNA methylase, putative, group 3 YP_005047489.1 3546975 R 720554 CDS YP_005047490.1 374297299 11563446 complement(3547895..3548248) 1 NC_016627.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20P 3548248 11563446 Clocl_3031 Clostridium clariflavum DSM 19732 50S ribosomal protein L20P YP_005047490.1 3547895 R 720554 CDS YP_005047491.1 374297300 11563447 complement(3548266..3548466) 1 NC_016627.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 3548466 11563447 Clocl_3032 Clostridium clariflavum DSM 19732 50S ribosomal protein L35 YP_005047491.1 3548266 R 720554 CDS YP_005047492.1 374297301 11563448 complement(3548500..3549021) 1 NC_016627.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 (bIF-3) 3549021 11563448 Clocl_3033 Clostridium clariflavum DSM 19732 translation initiation factor 3 (bIF-3) YP_005047492.1 3548500 R 720554 CDS YP_005047493.1 374297302 11563449 complement(3549303..3550364) 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 3550364 11563449 Clocl_3034 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005047493.1 3549303 R 720554 CDS YP_005047494.1 374297303 11563450 complement(3550477..3551112) 1 NC_016627.1 PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; thymidylate synthase, flavin-dependent 3551112 11563450 Clocl_3035 Clostridium clariflavum DSM 19732 thymidylate synthase, flavin-dependent YP_005047494.1 3550477 R 720554 CDS YP_005047495.1 374297304 11563451 complement(3551260..3553173) 1 NC_016627.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase 3553173 11563451 Clocl_3036 Clostridium clariflavum DSM 19732 Ser-tRNA(Thr) hydrolase, threonyl-tRNA synthetase YP_005047495.1 3551260 R 720554 CDS YP_005047496.1 374297305 11563452 3553895..3555220 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 3555220 11563452 Clocl_3037 Clostridium clariflavum DSM 19732 histidine kinase YP_005047496.1 3553895 D 720554 CDS YP_005047497.1 374297306 11563453 3555405..3560030 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48; Cellulose binding domain-containing protein 3560030 11563453 Clocl_3038 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein YP_005047497.1 3555405 D 720554 CDS YP_005047498.1 374297307 11563454 complement(3560186..3562780) 1 NC_016627.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; dolichyl-phosphate-mannose--protein O-mannosyl transferase 3562780 11563454 Clocl_3039 Clostridium clariflavum DSM 19732 dolichyl-phosphate-mannose--protein O-mannosyl transferase YP_005047498.1 3560186 R 720554 CDS YP_005047499.1 374297308 11563455 complement(3563457..3564209) 1 NC_016627.1 PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein; competence protein ComEA-like protein with helix-hairpin-helix repeat region 3564209 11563455 Clocl_3040 Clostridium clariflavum DSM 19732 competence protein ComEA-like protein with helix-hairpin-helix repeat region YP_005047499.1 3563457 R 720554 CDS YP_005047500.1 374297309 11563457 3566262..3567557 1 NC_016627.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain; manually curated; D-alanyl-D-alanine carboxypeptidase 3567557 11563457 Clocl_3042 Clostridium clariflavum DSM 19732 D-alanyl-D-alanine carboxypeptidase YP_005047500.1 3566262 D 720554 CDS YP_005047501.1 374297310 11563459 3569592..3570818 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3570818 11563459 Clocl_3044 Clostridium clariflavum DSM 19732 transposase YP_005047501.1 3569592 D 720554 CDS YP_005047502.1 374297311 11563460 complement(3570860..3571105) 1 NC_016627.1 hypothetical protein 3571105 11563460 Clocl_3045 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047502.1 3570860 R 720554 CDS YP_005047503.1 374297312 11563462 3572683..3573912 1 NC_016627.1 hypothetical protein 3573912 11563462 Clocl_3047 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047503.1 3572683 D 720554 CDS YP_005047504.1 374297313 11563464 3575045..3575500 1 NC_016627.1 hypothetical protein 3575500 11563464 Clocl_3049 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047504.1 3575045 D 720554 CDS YP_005047505.1 374297314 11563465 3575523..3576461 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 3576461 11563465 Clocl_3050 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005047505.1 3575523 D 720554 CDS YP_005047506.1 374297315 11563466 3576831..3577199 1 NC_016627.1 hypothetical protein 3577199 11563466 Clocl_3051 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047506.1 3576831 D 720554 CDS YP_005047507.1 374297316 11563467 3577523..3578740 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3578740 11563467 Clocl_3052 Clostridium clariflavum DSM 19732 transposase YP_005047507.1 3577523 D 720554 CDS YP_005047508.1 374297317 11563468 complement(3579095..3579430) 1 NC_016627.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap-like ribosome-associated protein 3579430 11563468 Clocl_3053 Clostridium clariflavum DSM 19732 iojap-like ribosome-associated protein YP_005047508.1 3579095 R 720554 CDS YP_005047509.1 374297318 11563469 complement(3579473..3580057) 1 NC_016627.1 hypothetical protein 3580057 11563469 Clocl_3054 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047509.1 3579473 R 720554 CDS YP_005047510.1 374297319 11563470 complement(3580134..3580721) 1 NC_016627.1 PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; putative HD superfamily hydrolase of NAD metabolism 3580721 11563470 Clocl_3055 Clostridium clariflavum DSM 19732 putative HD superfamily hydrolase of NAD metabolism YP_005047510.1 3580134 R 720554 CDS YP_005047511.1 374297320 11563471 complement(3580740..3581360) 1 NC_016627.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate/nicotinamide nucleotide adenylyltransferase 3581360 11563471 Clocl_3056 Clostridium clariflavum DSM 19732 nicotinate/nicotinamide nucleotide adenylyltransferase YP_005047511.1 3580740 R 720554 CDS YP_005047512.1 374297321 11563472 complement(3581368..3582330) 1 NC_016627.1 PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); transcriptional regulator/sugar kinase 3582330 11563472 Clocl_3057 Clostridium clariflavum DSM 19732 transcriptional regulator/sugar kinase YP_005047512.1 3581368 R 720554 CDS YP_005047513.1 374297322 11563473 complement(3582485..3584314) 1 NC_016627.1 PFAM: Alpha-L-arabinofuranosidase B (ABFB); Dockerin type I repeat; Glycosyl hydrolases family 43; putative beta-xylosidase 3584314 11563473 Clocl_3058 Clostridium clariflavum DSM 19732 putative beta-xylosidase YP_005047513.1 3582485 R 720554 CDS YP_005047514.1 374297323 11563474 complement(3584668..3586371) 1 NC_016627.1 PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter-binding protein 3586371 11563474 Clocl_3059 Clostridium clariflavum DSM 19732 GH3 auxin-responsive promoter-binding protein YP_005047514.1 3584668 R 720554 CDS YP_005047515.1 374297324 11563476 3588399..3589391 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 3589391 11563476 Clocl_3061 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005047515.1 3588399 D 720554 CDS YP_005047516.1 374297325 11563477 complement(3589460..3589963) 1 NC_016627.1 hypothetical protein 3589963 11563477 Clocl_3062 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047516.1 3589460 R 720554 CDS YP_005047517.1 374297326 11563478 complement(3590263..3590775) 1 NC_016627.1 hypothetical protein 3590775 11563478 Clocl_3063 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047517.1 3590263 R 720554 CDS YP_005047518.1 374297327 11563479 complement(3590896..3591723) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 3591723 11563479 Clocl_3064 Clostridium clariflavum DSM 19732 acetyltransferase, N-acetylglutamate synthase YP_005047518.1 3590896 R 720554 CDS YP_005047519.1 374297328 11563481 complement(3592649..3593908) 1 NC_016627.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 3593908 11563481 Clocl_3066 Clostridium clariflavum DSM 19732 phosphoribosylamine--glycine ligase YP_005047519.1 3592649 R 720554 CDS YP_005047520.1 374297329 11563482 complement(3593925..3595469) 1 NC_016627.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3595469 11563482 Clocl_3067 Clostridium clariflavum DSM 19732 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_005047520.1 3593925 R 720554 CDS YP_005047521.1 374297330 11563483 complement(3595506..3596132) 1 NC_016627.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 3596132 11563483 Clocl_3068 Clostridium clariflavum DSM 19732 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase YP_005047521.1 3595506 R 720554 CDS YP_005047522.1 374297331 11563484 complement(3596126..3597148) 1 NC_016627.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylaminoimidazole synthetase 3597148 11563484 Clocl_3069 Clostridium clariflavum DSM 19732 phosphoribosylaminoimidazole synthetase YP_005047522.1 3596126 R 720554 CDS YP_005047523.1 374297332 11563485 complement(3597198..3598664) 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase 3598664 11563485 Clocl_3070 Clostridium clariflavum DSM 19732 amidophosphoribosyltransferase YP_005047523.1 3597198 R 720554 CDS YP_005047524.1 374297333 11563486 complement(3598678..3599193) 1 NC_016627.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 5-(carboxyamino)imidazole ribonucleotide mutase 3599193 11563486 Clocl_3071 Clostridium clariflavum DSM 19732 5-(carboxyamino)imidazole ribonucleotide mutase YP_005047524.1 3598678 R 720554 CDS YP_005047525.1 374297334 11563487 complement(3599304..3600695) 1 NC_016627.1 PFAM: Permease family; permease 3600695 11563487 Clocl_3072 Clostridium clariflavum DSM 19732 permease YP_005047525.1 3599304 R 720554 CDS YP_005047526.1 374297335 11563488 complement(3600907..3601902) 1 NC_016627.1 PFAM: Membrane transport protein; putative permease 3601902 11563488 Clocl_3073 Clostridium clariflavum DSM 19732 putative permease YP_005047526.1 3600907 R 720554 CDS YP_005047527.1 374297336 11563489 complement(3602430..3603449) 1 NC_016627.1 hypothetical protein 3603449 11563489 Clocl_3074 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047527.1 3602430 R 720554 CDS YP_005047528.1 374297337 11563490 complement(3603717..3604172) 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 3604172 11563490 Clocl_3075 Clostridium clariflavum DSM 19732 transposase YP_005047528.1 3603717 R 720554 CDS YP_005047529.1 374297338 11563491 complement(3604385..3604816) 1 NC_016627.1 hypothetical protein 3604816 11563491 Clocl_3076 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047529.1 3604385 R 720554 CDS YP_005047530.1 374297339 11563492 complement(3605395..3606672) 1 NC_016627.1 PFAM: delta endotoxin, N-terminal domain; delta endotoxin-like protein 3606672 11563492 Clocl_3077 Clostridium clariflavum DSM 19732 delta endotoxin-like protein YP_005047530.1 3605395 R 720554 CDS YP_005047531.1 374297340 11563493 complement(3606676..3608064) 1 NC_016627.1 hypothetical protein 3608064 11563493 Clocl_3078 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047531.1 3606676 R 720554 CDS YP_005047532.1 374297341 11563495 complement(3608473..3609816) 1 NC_016627.1 hypothetical protein 3609816 11563495 Clocl_3080 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047532.1 3608473 R 720554 CDS YP_005047533.1 374297342 11563496 3610119..3611180 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 3611180 11563496 Clocl_3081 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005047533.1 3610119 D 720554 CDS YP_005047534.1 374297343 11563498 complement(3612461..3614050) 1 NC_016627.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; tRNA methyl transferase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase 3614050 11563498 Clocl_3083 Clostridium clariflavum DSM 19732 GMP synthase YP_005047534.1 3612461 R 720554 CDS YP_005047535.1 374297344 11563499 complement(3614187..3615125) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; manually curated; radical SAM protein 3615125 11563499 Clocl_3084 Clostridium clariflavum DSM 19732 radical SAM protein YP_005047535.1 3614187 R 720554 CDS YP_005047536.1 374297345 11563500 complement(3615157..3616365) 1 NC_016627.1 PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein; hypothetical protein 3616365 11563500 Clocl_3085 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047536.1 3615157 R 720554 CDS YP_005047537.1 374297346 11563501 complement(3616381..3617127) 1 NC_016627.1 PFAM: AIR carboxylase; NCAIR mutase-like protein 3617127 11563501 Clocl_3086 Clostridium clariflavum DSM 19732 NCAIR mutase-like protein YP_005047537.1 3616381 R 720554 CDS YP_005047538.1 374297347 11563502 complement(3617195..3618064) 1 NC_016627.1 PFAM: Domain of unknown function (DUF2520); Rossmann-like domain; hypothetical protein 3618064 11563502 Clocl_3087 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047538.1 3617195 R 720554 CDS YP_005047539.1 374297348 11563503 3618474..3621455 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3621455 11563503 Clocl_3088 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047539.1 3618474 D 720554 CDS YP_005047540.1 374297349 11563504 complement(3621575..3622561) 1 NC_016627.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 3622561 11563504 Clocl_3089 Clostridium clariflavum DSM 19732 peptide chain release factor 2 YP_005047540.1 3621575 R 720554 CDS YP_005047541.1 374297350 11563505 complement(3622865..3623539) 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 3623539 11563505 Clocl_3090 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047541.1 3622865 R 720554 CDS YP_005047542.1 374297351 11563506 3623828..3623980 1 NC_016627.1 PFAM: Spo0E like sporulation regulatory protein; Spo0E like sporulation regulatory protein 3623980 11563506 Clocl_3091 Clostridium clariflavum DSM 19732 Spo0E like sporulation regulatory protein YP_005047542.1 3623828 D 720554 CDS YP_005047543.1 374297352 11563507 complement(3624079..3624897) 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 3624897 11563507 Clocl_3092 Clostridium clariflavum DSM 19732 HAD-superfamily hydrolase YP_005047543.1 3624079 R 720554 CDS YP_005047544.1 374297353 11563508 complement(3624909..3626075) 1 NC_016627.1 PFAM: Aminotransferase class I and II; aspartate/tyrosine/aromatic aminotransferase 3626075 11563508 Clocl_3093 Clostridium clariflavum DSM 19732 aspartate/tyrosine/aromatic aminotransferase YP_005047544.1 3624909 R 720554 CDS YP_005047545.1 374297354 11563509 complement(3626072..3626551) 1 NC_016627.1 PFAM: AsnC family; transcriptional regulator 3626551 11563509 Clocl_3094 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005047545.1 3626072 R 720554 CDS YP_005047546.1 374297355 11563510 complement(3627060..3627623) 1 NC_016627.1 PFAM: DivIVA protein; putative integral membrane protein 3627623 11563510 Clocl_3095 Clostridium clariflavum DSM 19732 putative integral membrane protein YP_005047546.1 3627060 R 720554 CDS YP_005047547.1 374297356 11563511 complement(3627858..3628190) 1 NC_016627.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin; protein disulfide-isomerase domain; thioredoxin 3628190 11563511 Clocl_3096 Clostridium clariflavum DSM 19732 thioredoxin YP_005047547.1 3627858 R 720554 CDS YP_005047548.1 374297357 11563512 complement(3628414..3628713) 1 NC_016627.1 PFAM: Uncharacterised BCR, COG1937; hypothetical protein 3628713 11563512 Clocl_3097 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047548.1 3628414 R 720554 CDS YP_005047549.1 374297358 11563513 complement(3628871..3629272) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1113); hypothetical protein 3629272 11563513 Clocl_3098 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047549.1 3628871 R 720554 CDS YP_005047550.1 374297359 11563514 3629458..3629997 1 NC_016627.1 PFAM: Protein of unknown function (DUF3267); hypothetical protein 3629997 11563514 Clocl_3099 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047550.1 3629458 D 720554 CDS YP_005047551.1 374297360 11563515 3630627..3633194 1 NC_016627.1 PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; alpha-glucan phosphorylase 3633194 11563515 Clocl_3100 Clostridium clariflavum DSM 19732 alpha-glucan phosphorylase YP_005047551.1 3630627 D 720554 CDS YP_005047552.1 374297361 11563516 complement(3633303..3634481) 1 NC_016627.1 TIGRFAM: TIGR00375 family protein; hypothetical protein 3634481 11563516 Clocl_3101 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047552.1 3633303 R 720554 CDS YP_005047553.1 374297362 11563517 3634933..3635943 1 NC_016627.1 PFAM: HMGL-like; isopropylmalate/homocitrate/citramalate synthase 3635943 11563517 Clocl_3102 Clostridium clariflavum DSM 19732 isopropylmalate/homocitrate/citramalate synthase YP_005047553.1 3634933 D 720554 CDS YP_005047554.1 374297363 11563518 3636729..3638306 1 NC_016627.1 PFAM: Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; CBM6-containing protein,glycosyl hydrolase family 11 3638306 11563518 Clocl_3103 Clostridium clariflavum DSM 19732 CBM6-containing protein,glycosyl hydrolase family 11 YP_005047554.1 3636729 D 720554 CDS YP_005047555.1 374297364 11563519 complement(3638428..3639414) 1 NC_016627.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; CoA-substrate-specific enzyme activase, putative 3639414 11563519 Clocl_3104 Clostridium clariflavum DSM 19732 CoA-substrate-specific enzyme activase, putative YP_005047555.1 3638428 R 720554 CDS YP_005047556.1 374297365 11563520 complement(3639383..3640498) 1 NC_016627.1 hypothetical protein 3640498 11563520 Clocl_3105 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047556.1 3639383 R 720554 CDS YP_005047557.1 374297366 11563521 complement(3640470..3641462) 1 NC_016627.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; CoA enzyme activase uncharacterised domain (DUF2229); hypothetical protein 3641462 11563521 Clocl_3106 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047557.1 3640470 R 720554 CDS YP_005047558.1 374297367 11563522 complement(3641638..3642192) 1 NC_016627.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 3642192 11563522 Clocl_3107 Clostridium clariflavum DSM 19732 signal peptidase I YP_005047558.1 3641638 R 720554 CDS YP_005047559.1 374297368 11563523 complement(3642267..3643196) 1 NC_016627.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; fructose-1,6-bisphosphate aldolase 3643196 11563523 Clocl_3108 Clostridium clariflavum DSM 19732 fructose-1,6-bisphosphate aldolase YP_005047559.1 3642267 R 720554 CDS YP_005047560.1 374297369 11563524 3643549..3644790 1 NC_016627.1 PFAM: Phosphofructokinase; 6-phosphofructokinase 3644790 11563524 Clocl_3109 Clostridium clariflavum DSM 19732 6-phosphofructokinase YP_005047560.1 3643549 D 720554 CDS YP_005047561.1 374297370 11563525 3645105..3647339 1 NC_016627.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1 3647339 11563525 Clocl_3110 Clostridium clariflavum DSM 19732 formate acetyltransferase 1 YP_005047561.1 3645105 D 720554 CDS YP_005047562.1 374297371 11563526 3647352..3648089 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; glycyl-radical enzyme activating protein family; pyruvate formate-lyase 1-activating enzyme 3648089 11563526 Clocl_3111 Clostridium clariflavum DSM 19732 pyruvate formate-lyase 1-activating enzyme YP_005047562.1 3647352 D 720554 CDS YP_005047563.1 374297372 11563527 complement(3648122..3648502) 1 NC_016627.1 hypothetical protein 3648502 11563527 Clocl_3112 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047563.1 3648122 R 720554 CDS YP_005047564.1 374297373 11563528 complement(3648573..3649811) 1 NC_016627.1 TIGRFAM: RNA polymerase sigma-I factor; hypothetical protein 3649811 11563528 Clocl_3113 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047564.1 3648573 R 720554 CDS YP_005047565.1 374297374 11563529 complement(3650072..3650629) 1 NC_016627.1 hypothetical protein 3650629 11563529 Clocl_3114 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047565.1 3650072 R 720554 CDS YP_005047566.1 374297375 11563530 complement(3650775..3651278) 1 NC_016627.1 hypothetical protein 3651278 11563530 Clocl_3115 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047566.1 3650775 R 720554 CDS YP_005047567.1 374297376 11563531 complement(3651289..3651738) 1 NC_016627.1 hypothetical protein 3651738 11563531 Clocl_3116 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047567.1 3651289 R 720554 CDS YP_005047568.1 374297377 11563532 complement(3651916..3652122) 1 NC_016627.1 hypothetical protein 3652122 11563532 Clocl_3117 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047568.1 3651916 R 720554 CDS YP_005047569.1 374297378 11563533 complement(3652205..3653089) 1 NC_016627.1 hypothetical protein 3653089 11563533 Clocl_3118 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047569.1 3652205 R 720554 CDS YP_005047570.1 374297379 11563534 complement(3653089..3654060) 1 NC_016627.1 hypothetical protein 3654060 11563534 Clocl_3119 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047570.1 3653089 R 720554 CDS YP_005047571.1 374297380 11563535 complement(3654038..3655501) 1 NC_016627.1 PFAM: Type II/IV secretion system protein; Flp pilus assembly protein, ATPase CpaF 3655501 11563535 Clocl_3120 Clostridium clariflavum DSM 19732 Flp pilus assembly protein, ATPase CpaF YP_005047571.1 3654038 R 720554 CDS YP_005047572.1 374297381 11563536 complement(3655525..3656352) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome partitioning ATPase 3656352 11563536 Clocl_3121 Clostridium clariflavum DSM 19732 chromosome partitioning ATPase YP_005047572.1 3655525 R 720554 CDS YP_005047573.1 374297382 11563537 complement(3656328..3657215) 1 NC_016627.1 hypothetical protein 3657215 11563537 Clocl_3122 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047573.1 3656328 R 720554 CDS YP_005047574.1 374297383 11563538 complement(3657284..3658621) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 3658621 11563538 Clocl_3123 Clostridium clariflavum DSM 19732 CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein YP_005047574.1 3657284 R 720554 CDS YP_005047575.1 374297384 11563539 complement(3658785..3659432) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 3659432 11563539 Clocl_3124 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005047575.1 3658785 R 720554 CDS YP_005047576.1 374297385 11563540 3659711..3660460 1 NC_016627.1 PFAM: PPIC-type PPIASE domain; parvulin-like peptidyl-prolyl isomerase 3660460 11563540 Clocl_3125 Clostridium clariflavum DSM 19732 parvulin-like peptidyl-prolyl isomerase YP_005047576.1 3659711 D 720554 CDS YP_005047577.1 374297386 11563541 complement(3660568..3661593) 1 NC_016627.1 PFAM: 37-kD nucleoid-associated bacterial protein; nucleoid-associated protein 3661593 11563541 Clocl_3126 Clostridium clariflavum DSM 19732 nucleoid-associated protein YP_005047577.1 3660568 R 720554 CDS YP_005047578.1 374297387 11563542 complement(3661719..3664082) 1 NC_016627.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); chaperone ATPase 3664082 11563542 Clocl_3127 Clostridium clariflavum DSM 19732 chaperone ATPase YP_005047578.1 3661719 R 720554 CDS YP_005047579.1 374297388 11563543 complement(3664552..3667383) 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; Excinuclease ABC subunit A 3667383 11563543 Clocl_3128 Clostridium clariflavum DSM 19732 Excinuclease ABC subunit A YP_005047579.1 3664552 R 720554 CDS YP_005047580.1 374297389 11563544 complement(3667482..3669464) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; Excinuclease ABC subunit B 3669464 11563544 Clocl_3129 Clostridium clariflavum DSM 19732 Excinuclease ABC subunit B YP_005047580.1 3667482 R 720554 CDS YP_005047581.1 374297390 11563545 complement(3669697..3670776) 1 NC_016627.1 hypothetical protein 3670776 11563545 Clocl_3130 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047581.1 3669697 R 720554 CDS YP_005047582.1 374297391 11563546 3671029..3674490 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; NB-ARC domain; putative ATPase 3674490 11563546 Clocl_3131 Clostridium clariflavum DSM 19732 putative ATPase YP_005047582.1 3671029 D 720554 CDS YP_005047583.1 374297392 11563547 3674581..3675816 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolase family 26; beta-mannanase 3675816 11563547 Clocl_3132 Clostridium clariflavum DSM 19732 beta-mannanase YP_005047583.1 3674581 D 720554 CDS YP_005047584.1 374297393 11563548 complement(3676094..3676618) 1 NC_016627.1 hypothetical protein 3676618 11563548 Clocl_3133 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047584.1 3676094 R 720554 CDS YP_005047585.1 374297394 11563549 complement(3676756..3677208) 1 NC_016627.1 hypothetical protein 3677208 11563549 Clocl_3134 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047585.1 3676756 R 720554 CDS YP_005047586.1 374297395 11563550 complement(3677256..3678746) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 3678746 11563550 Clocl_3135 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005047586.1 3677256 R 720554 CDS YP_005047587.1 374297396 11563551 complement(3678736..3679431) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 3679431 11563551 Clocl_3136 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005047587.1 3678736 R 720554 CDS YP_005047588.1 374297397 11563552 3679755..3680201 1 NC_016627.1 hypothetical protein 3680201 11563552 Clocl_3137 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047588.1 3679755 D 720554 CDS YP_005047589.1 374297398 11563553 complement(3680202..3681038) 1 NC_016627.1 hypothetical protein 3681038 11563553 Clocl_3138 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047589.1 3680202 R 720554 CDS YP_005047590.1 374297399 11563554 complement(3681186..3682031) 1 NC_016627.1 PFAM: Tetratricopeptide repeat; tetratricopeptide repeat protein 3682031 11563554 Clocl_3139 Clostridium clariflavum DSM 19732 tetratricopeptide repeat protein YP_005047590.1 3681186 R 720554 CDS YP_005047591.1 374297400 11563555 complement(3682028..3683311) 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); Tetratricopeptide repeat; AAA ATPase 3683311 11563555 Clocl_3140 Clostridium clariflavum DSM 19732 AAA ATPase YP_005047591.1 3682028 R 720554 CDS YP_005047592.1 374297401 11563556 complement(3683357..3683701) 1 NC_016627.1 hypothetical protein 3683701 11563556 Clocl_3141 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047592.1 3683357 R 720554 CDS YP_005047593.1 374297402 11563557 complement(3683940..3684395) 1 NC_016627.1 hypothetical protein 3684395 11563557 Clocl_3142 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047593.1 3683940 R 720554 CDS YP_005047594.1 374297403 11563559 complement(3685163..3685774) 1 NC_016627.1 PFAM: Pentapeptide repeats (8 copies); putative low-complexity protein 3685774 11563559 Clocl_3144 Clostridium clariflavum DSM 19732 putative low-complexity protein YP_005047594.1 3685163 R 720554 CDS YP_005047595.1 374297404 11563560 complement(3686301..3686732) 1 NC_016627.1 hypothetical protein 3686732 11563560 Clocl_3145 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047595.1 3686301 R 720554 CDS YP_005047596.1 374297405 11563562 complement(3687835..3688659) 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 3688659 11563562 Clocl_3147 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005047596.1 3687835 R 720554 CDS YP_005047597.1 374297406 11563563 complement(3688973..3689947) 1 NC_016627.1 hypothetical protein 3689947 11563563 Clocl_3148 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047597.1 3688973 R 720554 CDS YP_005047598.1 374297407 11563564 complement(3689931..3690995) 1 NC_016627.1 hypothetical protein 3690995 11563564 Clocl_3149 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047598.1 3689931 R 720554 CDS YP_005047599.1 374297408 11563565 complement(3691008..3692318) 1 NC_016627.1 PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase 3692318 11563565 Clocl_3150 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase YP_005047599.1 3691008 R 720554 CDS YP_005047600.1 374297409 11563566 complement(3692402..3693682) 1 NC_016627.1 PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase 3693682 11563566 Clocl_3151 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase YP_005047600.1 3692402 R 720554 CDS YP_005047601.1 374297410 11563567 complement(3693783..3695009) 1 NC_016627.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Reverse transcriptase (RNA-dependent DNA polymerase) 3695009 11563567 Clocl_3152 Clostridium clariflavum DSM 19732 Reverse transcriptase (RNA-dependent DNA polymerase) YP_005047601.1 3693783 R 720554 CDS YP_005047602.1 374297411 11563568 complement(3695302..3696660) 1 NC_016627.1 PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase 3696660 11563568 Clocl_3153 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase YP_005047602.1 3695302 R 720554 CDS YP_005047603.1 374297412 11563569 complement(3696971..3698299) 1 NC_016627.1 PFAM: Radical SAM superfamily; B12 binding domain; Fe-S oxidoreductase 3698299 11563569 Clocl_3154 Clostridium clariflavum DSM 19732 Fe-S oxidoreductase YP_005047603.1 3696971 R 720554 CDS YP_005047604.1 374297413 11563570 complement(3698722..3703155) 1 NC_016627.1 manually curated; chromosome segregation ATPase 3703155 11563570 Clocl_3155 Clostridium clariflavum DSM 19732 chromosome segregation ATPase YP_005047604.1 3698722 R 720554 CDS YP_005047605.1 374297414 11563571 complement(3703196..3703909) 1 NC_016627.1 hypothetical protein 3703909 11563571 Clocl_3156 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047605.1 3703196 R 720554 CDS YP_005047606.1 374297415 11563572 complement(3703909..3705483) 1 NC_016627.1 hypothetical protein 3705483 11563572 Clocl_3157 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047606.1 3703909 R 720554 CDS YP_005047607.1 374297416 11563573 complement(3705461..3706507) 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); hypothetical protein 3706507 11563573 Clocl_3158 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047607.1 3705461 R 720554 CDS YP_005047608.1 374297417 11563574 complement(3706680..3706820) 1 NC_016627.1 hypothetical protein 3706820 11563574 Clocl_3159 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047608.1 3706680 R 720554 CDS YP_005047609.1 374297418 11563576 complement(3706970..3708214) 1 NC_016627.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 3708214 11563576 Clocl_3161 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005047609.1 3706970 R 720554 CDS YP_005047610.1 374297419 11563578 3710365..3711093 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 3711093 11563578 Clocl_3163 Clostridium clariflavum DSM 19732 DNA replication protein YP_005047610.1 3710365 D 720554 CDS YP_005047611.1 374297420 11563579 3711320..3711673 1 NC_016627.1 PFAM: Transposase; Transposase 3711673 11563579 Clocl_3164 Clostridium clariflavum DSM 19732 Transposase YP_005047611.1 3711320 D 720554 CDS YP_005047612.1 374297421 11563580 3711670..3712023 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 3712023 11563580 Clocl_3165 Clostridium clariflavum DSM 19732 transposase YP_005047612.1 3711670 D 720554 CDS YP_005047613.1 374297422 11563582 3713694..3713978 1 NC_016627.1 hypothetical protein 3713978 11563582 Clocl_3167 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047613.1 3713694 D 720554 CDS YP_005047614.1 374297423 11563583 complement(3714292..3714543) 1 NC_016627.1 hypothetical protein 3714543 11563583 Clocl_3168 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047614.1 3714292 R 720554 CDS YP_005047615.1 374297424 11563584 complement(3715180..3717897) 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); RHS repeat-associated core domain-containing protein 3717897 11563584 Clocl_3169 Clostridium clariflavum DSM 19732 RHS repeat-associated core domain-containing protein YP_005047615.1 3715180 R 720554 CDS YP_005047616.1 374297425 11563585 complement(3717988..3718272) 1 NC_016627.1 hypothetical protein 3718272 11563585 Clocl_3170 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047616.1 3717988 R 720554 CDS YP_005047617.1 374297426 11563586 3718395..3719426 1 NC_016627.1 PFAM: Transposase IS66 family; Insertion element protein; transposase 3719426 11563586 Clocl_3171 Clostridium clariflavum DSM 19732 transposase YP_005047617.1 3718395 D 720554 CDS YP_005047618.1 374297427 11563587 complement(3719605..3720909) 1 NC_016627.1 PFAM: Transposase IS66 family; transposase 3720909 11563587 Clocl_3172 Clostridium clariflavum DSM 19732 transposase YP_005047618.1 3719605 R 720554 CDS YP_005047619.1 374297428 11563588 complement(3721239..3721592) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 3721592 11563588 Clocl_3173 Clostridium clariflavum DSM 19732 transposase YP_005047619.1 3721239 R 720554 CDS YP_005047620.1 374297429 11563589 complement(3721589..3721942) 1 NC_016627.1 PFAM: Transposase; Transposase 3721942 11563589 Clocl_3174 Clostridium clariflavum DSM 19732 Transposase YP_005047620.1 3721589 R 720554 CDS YP_005047621.1 374297430 11563590 complement(3722404..3723621) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 3723621 11563590 Clocl_3175 Clostridium clariflavum DSM 19732 transposase YP_005047621.1 3722404 R 720554 CDS YP_005047622.1 374297431 11563591 complement(3723744..3725114) 1 NC_016627.1 hypothetical protein 3725114 11563591 Clocl_3176 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047622.1 3723744 R 720554 CDS YP_005047623.1 374297432 11563592 complement(3725379..3726719) 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 3726719 11563592 Clocl_3177 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005047623.1 3725379 R 720554 CDS YP_005047624.1 374297433 11563593 complement(3726764..3727942) 1 NC_016627.1 PFAM: Predicted permease; manually curated; lipoprotein release ABC transporter permease 3727942 11563593 Clocl_3178 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005047624.1 3726764 R 720554 CDS YP_005047625.1 374297434 11563594 complement(3727932..3728600) 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 3728600 11563594 Clocl_3179 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005047625.1 3727932 R 720554 CDS YP_005047626.1 374297435 11563595 complement(3728602..3729129) 1 NC_016627.1 hypothetical protein 3729129 11563595 Clocl_3180 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047626.1 3728602 R 720554 CDS YP_005047627.1 374297436 11563596 complement(3729262..3729534) 1 NC_016627.1 manually curated; hypothetical protein 3729534 11563596 Clocl_3181 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047627.1 3729262 R 720554 CDS YP_005047628.1 374297437 11563597 3730388..3730525 1 NC_016627.1 hypothetical protein 3730525 11563597 Clocl_3182 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047628.1 3730388 D 720554 CDS YP_005047629.1 374297438 11563598 3730686..3731510 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 3731510 11563598 Clocl_3183 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047629.1 3730686 D 720554 CDS YP_005047630.1 374297439 11563599 3731739..3732512 1 NC_016627.1 PFAM: Bacterial transcription activator, effector binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 3732512 11563599 Clocl_3184 Clostridium clariflavum DSM 19732 DNA-binding domain-containing protein YP_005047630.1 3731739 D 720554 CDS YP_005047631.1 374297440 11563600 complement(3732702..3734150) 1 NC_016627.1 PFAM: Putative transposase; transposase 3734150 11563600 Clocl_3185 Clostridium clariflavum DSM 19732 transposase YP_005047631.1 3732702 R 720554 CDS YP_005047632.1 374297441 11563601 3734185..3735405 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 3735405 11563601 Clocl_3186 Clostridium clariflavum DSM 19732 transglutaminase YP_005047632.1 3734185 D 720554 CDS YP_005047633.1 374297442 11563602 complement(3735604..3737103) 1 NC_016627.1 hypothetical protein 3737103 11563602 Clocl_3187 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047633.1 3735604 R 720554 CDS YP_005047634.1 374297443 11563603 3737376..3737696 1 NC_016627.1 hypothetical protein 3737696 11563603 Clocl_3188 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047634.1 3737376 D 720554 CDS YP_005047635.1 374297444 11563604 3738095..3738265 1 NC_016627.1 hypothetical protein 3738265 11563604 Clocl_3189 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047635.1 3738095 D 720554 CDS YP_005047636.1 374297445 11563605 3738308..3738601 1 NC_016627.1 PFAM: Transposase; transposase 3738601 11563605 Clocl_3190 Clostridium clariflavum DSM 19732 transposase YP_005047636.1 3738308 D 720554 CDS YP_005047637.1 374297446 11563606 3738561..3739460 1 NC_016627.1 PFAM: Integrase core domain; transposase 3739460 11563606 Clocl_3191 Clostridium clariflavum DSM 19732 transposase YP_005047637.1 3738561 D 720554 CDS YP_005047638.1 374297447 11563607 complement(3739652..3740776) 1 NC_016627.1 hypothetical protein 3740776 11563607 Clocl_3192 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047638.1 3739652 R 720554 CDS YP_005047639.1 374297448 11563612 complement(3745418..3745594) 1 NC_016627.1 hypothetical protein 3745594 11563612 Clocl_3197 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047639.1 3745418 R 720554 CDS YP_005047640.1 374297449 11563614 complement(3747043..3747615) 1 NC_016627.1 hypothetical protein 3747615 11563614 Clocl_3199 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047640.1 3747043 R 720554 CDS YP_005047641.1 374297450 11563615 complement(3747683..3747976) 1 NC_016627.1 hypothetical protein 3747976 11563615 Clocl_3200 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047641.1 3747683 R 720554 CDS YP_005047642.1 374297451 11563616 complement(3748088..3748372) 1 NC_016627.1 hypothetical protein 3748372 11563616 Clocl_3201 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047642.1 3748088 R 720554 CDS YP_005047643.1 374297452 11563618 complement(3750008..3750361) 1 NC_016627.1 PFAM: IS66 Orf2 like protein; transposase 3750361 11563618 Clocl_3203 Clostridium clariflavum DSM 19732 transposase YP_005047643.1 3750008 R 720554 CDS YP_005047644.1 374297453 11563619 complement(3750358..3750711) 1 NC_016627.1 PFAM: Transposase; Transposase 3750711 11563619 Clocl_3204 Clostridium clariflavum DSM 19732 Transposase YP_005047644.1 3750358 R 720554 CDS YP_005047645.1 374297454 11563620 complement(3751006..3751494) 1 NC_016627.1 hypothetical protein 3751494 11563620 Clocl_3205 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047645.1 3751006 R 720554 CDS YP_005047646.1 374297455 11563621 complement(3751499..3752302) 1 NC_016627.1 hypothetical protein 3752302 11563621 Clocl_3206 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047646.1 3751499 R 720554 CDS YP_005047647.1 374297456 11563622 complement(3752765..3753199) 1 NC_016627.1 hypothetical protein 3753199 11563622 Clocl_3207 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047647.1 3752765 R 720554 CDS YP_005047648.1 374297457 11563623 complement(3753233..3753781) 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 3753781 11563623 Clocl_3208 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005047648.1 3753233 R 720554 CDS YP_005047649.1 374297458 11563624 complement(3754234..3754593) 1 NC_016627.1 manually curated; hypothetical protein 3754593 11563624 Clocl_3209 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047649.1 3754234 R 720554 CDS YP_005047650.1 374297459 11563625 complement(3754654..3755187) 1 NC_016627.1 PFAM: Copper/zinc superoxide dismutase (SODC); Cu/Zn superoxide dismutase 3755187 11563625 Clocl_3210 Clostridium clariflavum DSM 19732 Cu/Zn superoxide dismutase YP_005047650.1 3754654 R 720554 CDS YP_005047651.1 374297460 11563626 complement(3755447..3757630) 1 NC_016627.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 3757630 11563626 Clocl_3211 Clostridium clariflavum DSM 19732 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005047651.1 3755447 R 720554 CDS YP_005047652.1 374297461 11563627 complement(3757696..3759675) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 3759675 11563627 Clocl_3212 Clostridium clariflavum DSM 19732 type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005047652.1 3757696 R 720554 CDS YP_005047653.1 374297462 11563628 3760191..3760673 1 NC_016627.1 hypothetical protein 3760673 11563628 Clocl_3213 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047653.1 3760191 D 720554 CDS YP_005047654.1 374297463 11563629 complement(3760689..3761132) 1 NC_016627.1 hypothetical protein 3761132 11563629 Clocl_3214 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047654.1 3760689 R 720554 CDS YP_005047655.1 374297464 11563630 complement(3761135..3761890) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1212); hypothetical protein 3761890 11563630 Clocl_3215 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047655.1 3761135 R 720554 CDS YP_005047656.1 374297465 11563631 3762136..3762747 1 NC_016627.1 PFAM: Cysteine-rich secretory protein family; LysM domain; TIGRFAM: spore coat assembly protein SafA; uncharacterized protein, YkwD family; spore coat assembly protein SafA/uncharacterized protein, YkwD family 3762747 11563631 Clocl_3216 Clostridium clariflavum DSM 19732 spore coat assembly protein SafA/uncharacterized protein, YkwD family YP_005047656.1 3762136 D 720554 CDS YP_005047657.1 374297466 11563632 complement(3762843..3764372) 1 NC_016627.1 PFAM: Bacterial SH3 domain; L,D-transpeptidase catalytic domain; manually curated; hypothetical protein 3764372 11563632 Clocl_3217 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047657.1 3762843 R 720554 CDS YP_005047658.1 374297467 11563633 complement(3764943..3765128) 1 NC_016627.1 hypothetical protein 3765128 11563633 Clocl_3218 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047658.1 3764943 R 720554 CDS YP_005047659.1 374297468 11563634 complement(3765311..3766336) 1 NC_016627.1 hypothetical protein 3766336 11563634 Clocl_3219 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047659.1 3765311 R 720554 CDS YP_005047660.1 374297469 11563635 complement(3766459..3767553) 1 NC_016627.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease); spore germination protein, amino acid permease 3767553 11563635 Clocl_3220 Clostridium clariflavum DSM 19732 spore germination protein, amino acid permease YP_005047660.1 3766459 R 720554 CDS YP_005047661.1 374297470 11563636 complement(3767561..3767770) 1 NC_016627.1 hypothetical protein 3767770 11563636 Clocl_3221 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047661.1 3767561 R 720554 CDS YP_005047662.1 374297471 11563637 complement(3767773..3768924) 1 NC_016627.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family; germination protein, Ger(X)C family 3768924 11563637 Clocl_3222 Clostridium clariflavum DSM 19732 germination protein, Ger(X)C family YP_005047662.1 3767773 R 720554 CDS YP_005047663.1 374297472 11563638 complement(3768926..3770509) 1 NC_016627.1 PFAM: Bacillus/Clostridium GerA spore germination protein; spore germination protein, GerA family 3770509 11563638 Clocl_3223 Clostridium clariflavum DSM 19732 spore germination protein, GerA family YP_005047663.1 3768926 R 720554 CDS YP_005047664.1 374297473 11563639 3770886..3772001 1 NC_016627.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase, Methanosarcina type; phosphoserine aminotransferase 3772001 11563639 Clocl_3224 Clostridium clariflavum DSM 19732 phosphoserine aminotransferase YP_005047664.1 3770886 D 720554 CDS YP_005047665.1 374297474 11563640 complement(3772134..3772682) 1 NC_016627.1 PFAM: BioY family; hypothetical protein 3772682 11563640 Clocl_3225 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047665.1 3772134 R 720554 CDS YP_005047666.1 374297475 11563641 complement(3772881..3773426) 1 NC_016627.1 PFAM: Nitroreductase family; nitroreductase 3773426 11563641 Clocl_3226 Clostridium clariflavum DSM 19732 nitroreductase YP_005047666.1 3772881 R 720554 CDS YP_005047667.1 374297476 11563642 3773727..3774494 1 NC_016627.1 PFAM: short chain dehydrogenase; dehydrogenase 3774494 11563642 Clocl_3227 Clostridium clariflavum DSM 19732 dehydrogenase YP_005047667.1 3773727 D 720554 CDS YP_005047668.1 374297477 11563643 complement(3774621..3775436) 1 NC_016627.1 hypothetical protein 3775436 11563643 Clocl_3228 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047668.1 3774621 R 720554 CDS YP_005047669.1 374297478 11563644 3775650..3776258 1 NC_016627.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; putative protein-S-isoprenylcysteine methyltransferase 3776258 11563644 Clocl_3229 Clostridium clariflavum DSM 19732 putative protein-S-isoprenylcysteine methyltransferase YP_005047669.1 3775650 D 720554 CDS YP_005047670.1 374297479 11563645 complement(3776418..3776882) 1 NC_016627.1 hypothetical protein 3776882 11563645 Clocl_3230 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047670.1 3776418 R 720554 CDS YP_005047671.1 374297480 11563647 3778849..3779307 1 NC_016627.1 hypothetical protein 3779307 11563647 Clocl_3232 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047671.1 3778849 D 720554 CDS YP_005047672.1 374297481 11563648 3779335..3779934 1 NC_016627.1 hypothetical protein 3779934 11563648 Clocl_3233 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047672.1 3779335 D 720554 CDS YP_005047673.1 374297482 11563649 3780282..3780917 1 NC_016627.1 PFAM: ubiE/COQ5 methyltransferase family; methylase involved in ubiquinone/menaquinone biosynthesis 3780917 11563649 Clocl_3234 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005047673.1 3780282 D 720554 CDS YP_005047674.1 374297483 11563650 complement(3781163..3781519) 1 NC_016627.1 PFAM: Endoribonuclease L-PSP; putative translation initiation inhibitor, yjgF family 3781519 11563650 Clocl_3235 Clostridium clariflavum DSM 19732 putative translation initiation inhibitor, yjgF family YP_005047674.1 3781163 R 720554 CDS YP_005047675.1 374297484 11563651 3782111..3782548 1 NC_016627.1 hypothetical protein 3782548 11563651 Clocl_3236 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047675.1 3782111 D 720554 CDS YP_005047676.1 374297485 11563652 complement(3783183..3784472) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 3784472 11563652 Clocl_3237 Clostridium clariflavum DSM 19732 transposase YP_005047676.1 3783183 R 720554 CDS YP_005047677.1 374297486 11563653 3784891..3786933 1 NC_016627.1 PFAM: Protein of unknown function, DUF255; thioredoxin domain-containing protein 3786933 11563653 Clocl_3238 Clostridium clariflavum DSM 19732 thioredoxin domain-containing protein YP_005047677.1 3784891 D 720554 CDS YP_005047678.1 374297487 11563654 complement(3787064..3788545) 1 NC_016627.1 PFAM: Glycosyl hydrolases family 18; Dockerin type I repeat; chitinase 3788545 11563654 Clocl_3239 Clostridium clariflavum DSM 19732 chitinase YP_005047678.1 3787064 R 720554 CDS YP_005047679.1 374297488 11563655 complement(3788668..3791022) 1 NC_016627.1 PFAM: DEAD_2; DNA helicase, Rad3 3791022 11563655 Clocl_3240 Clostridium clariflavum DSM 19732 DNA helicase, Rad3 YP_005047679.1 3788668 R 720554 CDS YP_005047680.1 374297489 11563656 complement(3791210..3791380) 1 NC_016627.1 PFAM: Domain of Unknown Function (DUF1540); hypothetical protein 3791380 11563656 Clocl_3241 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047680.1 3791210 R 720554 CDS YP_005047681.1 374297490 11563657 complement(3791624..3793801) 1 NC_016627.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal-translocating P-type ATPase 3793801 11563657 Clocl_3242 Clostridium clariflavum DSM 19732 heavy metal-translocating P-type ATPase YP_005047681.1 3791624 R 720554 CDS YP_005047682.1 374297491 11563658 complement(3793794..3794153) 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 3794153 11563658 Clocl_3243 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047682.1 3793794 R 720554 CDS YP_005047683.1 374297492 11563659 complement(3794253..3795557) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 1; beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase 3795557 11563659 Clocl_3244 Clostridium clariflavum DSM 19732 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase YP_005047683.1 3794253 R 720554 CDS YP_005047684.1 374297493 11563660 3795882..3797432 1 NC_016627.1 PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated; diguanylate cyclase domain-containing protein 3797432 11563660 Clocl_3245 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005047684.1 3795882 D 720554 CDS YP_005047685.1 374297494 11563661 complement(3797631..3799109) 1 NC_016627.1 PFAM: L-fucose isomerase, C-terminal domain; L-fucose isomerase family protein 3799109 11563661 Clocl_3246 Clostridium clariflavum DSM 19732 L-fucose isomerase family protein YP_005047685.1 3797631 R 720554 CDS YP_005047686.1 374297495 11563662 complement(3799555..3801747) 1 NC_016627.1 PFAM: S-layer homology domain; Uncharacterised BCR, COG1649; hypothetical protein 3801747 11563662 Clocl_3247 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047686.1 3799555 R 720554 CDS YP_005047687.1 374297496 11563663 complement(3802022..3804547) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Regulator of chromosome condensation (RCC1) repeat; copper amine oxidase family protein 3804547 11563663 Clocl_3248 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047687.1 3802022 R 720554 CDS YP_005047688.1 374297497 11563664 complement(3804693..3805196) 1 NC_016627.1 hypothetical protein 3805196 11563664 Clocl_3249 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047688.1 3804693 R 720554 CDS YP_005047689.1 374297498 11563665 complement(3805336..3806097) 1 NC_016627.1 ferredoxin 3806097 11563665 Clocl_3250 Clostridium clariflavum DSM 19732 ferredoxin YP_005047689.1 3805336 R 720554 CDS YP_005047690.1 374297499 11563666 complement(3806143..3806505) 1 NC_016627.1 PFAM: Domain of unknown function (DUF307); hypothetical protein 3806505 11563666 Clocl_3251 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047690.1 3806143 R 720554 CDS YP_005047691.1 374297500 11563667 complement(3806594..3807010) 1 NC_016627.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; secondary thiamine-phosphate synthase enzyme 3807010 11563667 Clocl_3252 Clostridium clariflavum DSM 19732 secondary thiamine-phosphate synthase enzyme YP_005047691.1 3806594 R 720554 CDS YP_005047692.1 374297501 11563668 complement(3807397..3809640) 1 NC_016627.1 PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Dockerin type I repeat; thioredoxin domain-containing protein 3809640 11563668 Clocl_3253 Clostridium clariflavum DSM 19732 thioredoxin domain-containing protein YP_005047692.1 3807397 R 720554 CDS YP_005047693.1 374297502 11563669 3810084..3810398 1 NC_016627.1 PFAM: Late competence development protein ComFB; Late competence development protein ComFB 3810398 11563669 Clocl_3254 Clostridium clariflavum DSM 19732 Late competence development protein ComFB YP_005047693.1 3810084 D 720554 CDS YP_005047694.1 374297503 11563670 3810674..3812284 1 NC_016627.1 PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; dockerin-like protein 3812284 11563670 Clocl_3255 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005047694.1 3810674 D 720554 CDS YP_005047695.1 374297504 11563671 complement(3812472..3813041) 1 NC_016627.1 manually curated; hypothetical protein 3813041 11563671 Clocl_3256 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047695.1 3812472 R 720554 CDS YP_005047696.1 374297505 11563672 complement(3813216..3814181) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1835); Protein of unknown function; hypothetical protein 3814181 11563672 Clocl_3257 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047696.1 3813216 R 720554 CDS YP_005047697.1 374297506 11563673 complement(3814274..3815542) 1 NC_016627.1 PFAM: YibE/F-like protein; putative multitransmembrane protein 3815542 11563673 Clocl_3258 Clostridium clariflavum DSM 19732 putative multitransmembrane protein YP_005047697.1 3814274 R 720554 CDS YP_005047698.1 374297507 11563674 complement(3815690..3817009) 1 NC_016627.1 PFAM: Major Facilitator Superfamily; manually curated; Major Facilitator Superfamily transporter 3817009 11563674 Clocl_3259 Clostridium clariflavum DSM 19732 Major Facilitator Superfamily transporter YP_005047698.1 3815690 R 720554 CDS YP_005047699.1 374297508 11563675 3817221..3817898 1 NC_016627.1 PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; hypothetical protein 3817898 11563675 Clocl_3260 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047699.1 3817221 D 720554 CDS YP_005047700.1 374297509 11563676 complement(3817979..3818785) 1 NC_016627.1 manually curated; hypothetical protein 3818785 11563676 Clocl_3261 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047700.1 3817979 R 720554 CDS YP_005047701.1 374297510 11563677 complement(3819078..3821375) 1 NC_016627.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase class II 3821375 11563677 Clocl_3262 Clostridium clariflavum DSM 19732 ribonucleoside-diphosphate reductase class II YP_005047701.1 3819078 R 720554 CDS YP_005047702.1 374297511 11563678 complement(3821678..3822931) 1 NC_016627.1 PFAM: Uncharacterised BCR, COG1649; hypothetical protein 3822931 11563678 Clocl_3263 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047702.1 3821678 R 720554 CDS YP_005047703.1 374297512 11563684 complement(3829680..3830276) 1 NC_016627.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; uracil-DNA glycosylase, family 4 3830276 11563684 Clocl_3269 Clostridium clariflavum DSM 19732 uracil-DNA glycosylase, family 4 YP_005047703.1 3829680 R 720554 CDS YP_005047704.1 374297513 11563685 complement(3830255..3830824) 1 NC_016627.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; uracil-DNA glycosylase, family 4 3830824 11563685 Clocl_3270 Clostridium clariflavum DSM 19732 uracil-DNA glycosylase, family 4 YP_005047704.1 3830255 R 720554 CDS YP_005047705.1 374297514 11563686 complement(3830830..3831459) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE, clostridial; organic radical activating enzyme 3831459 11563686 Clocl_3271 Clostridium clariflavum DSM 19732 organic radical activating enzyme YP_005047705.1 3830830 R 720554 CDS YP_005047706.1 374297515 11563687 complement(3831567..3831953) 1 NC_016627.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; queuosine biosynthesis protein QueD 3831953 11563687 Clocl_3272 Clostridium clariflavum DSM 19732 queuosine biosynthesis protein QueD YP_005047706.1 3831567 R 720554 CDS YP_005047707.1 374297516 11563688 complement(3832080..3832769) 1 NC_016627.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; preQ(0) biosynthesis protein QueC 3832769 11563688 Clocl_3273 Clostridium clariflavum DSM 19732 preQ(0) biosynthesis protein QueC YP_005047707.1 3832080 R 720554 CDS YP_005047708.1 374297517 11563689 complement(3832846..3833625) 1 NC_016627.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; CoA-substrate-specific enzyme activase, putative 3833625 11563689 Clocl_3274 Clostridium clariflavum DSM 19732 CoA-substrate-specific enzyme activase, putative YP_005047708.1 3832846 R 720554 CDS YP_005047709.1 374297518 11563690 complement(3833649..3834632) 1 NC_016627.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 3834632 11563690 Clocl_3275 Clostridium clariflavum DSM 19732 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB YP_005047709.1 3833649 R 720554 CDS YP_005047710.1 374297519 11563691 complement(3834967..3835959) 1 NC_016627.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457); putative membrane-bound metal-dependent hydrolase 3835959 11563691 Clocl_3276 Clostridium clariflavum DSM 19732 putative membrane-bound metal-dependent hydrolase YP_005047710.1 3834967 R 720554 CDS YP_005047711.1 374297520 11563692 complement(3836253..3837161) 1 NC_016627.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain; cell envelope-related function transcriptional attenuator common domain-containing protein 3837161 11563692 Clocl_3277 Clostridium clariflavum DSM 19732 cell envelope-related function transcriptional attenuator common domain-containing protein YP_005047711.1 3836253 R 720554 CDS YP_005047712.1 374297521 11563693 complement(3837360..3838595) 1 NC_016627.1 PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; LL-diaminopimelate aminotransferase apoenzyme 3838595 11563693 Clocl_3278 Clostridium clariflavum DSM 19732 LL-diaminopimelate aminotransferase apoenzyme YP_005047712.1 3837360 R 720554 CDS YP_005047713.1 374297522 11563694 complement(3838772..3839605) 1 NC_016627.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 3839605 11563694 Clocl_3279 Clostridium clariflavum DSM 19732 diaminopimelate epimerase YP_005047713.1 3838772 R 720554 CDS YP_005047714.1 374297523 11563695 3839880..3840740 1 NC_016627.1 hypothetical protein 3840740 11563695 Clocl_3280 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047714.1 3839880 D 720554 CDS YP_005047715.1 374297524 11563696 3840813..3842768 1 NC_016627.1 PFAM: Protein of unknown function (DUF2029); putative integral membrane protein 3842768 11563696 Clocl_3281 Clostridium clariflavum DSM 19732 putative integral membrane protein YP_005047715.1 3840813 D 720554 CDS YP_005047716.1 374297525 11563697 3842795..3845665 1 NC_016627.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; dolichyl-phosphate-mannose--protein O-mannosyl transferase 3845665 11563697 Clocl_3282 Clostridium clariflavum DSM 19732 dolichyl-phosphate-mannose--protein O-mannosyl transferase YP_005047716.1 3842795 D 720554 CDS YP_005047717.1 374297526 11563698 3845688..3846662 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 3846662 11563698 Clocl_3283 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005047717.1 3845688 D 720554 CDS YP_005047718.1 374297527 11563704 complement(3848463..3849734) 1 NC_016627.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 3849734 11563704 Clocl_3289 Clostridium clariflavum DSM 19732 adenylosuccinate synthetase YP_005047718.1 3848463 R 720554 CDS YP_005047719.1 374297528 11563705 complement(3850126..3850338) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain; hydrid cluster protein-associated redox disulfide domain protein 3850338 11563705 Clocl_3290 Clostridium clariflavum DSM 19732 hydrid cluster protein-associated redox disulfide domain protein YP_005047719.1 3850126 R 720554 CDS YP_005047720.1 374297529 11563706 complement(3850518..3851072) 1 NC_016627.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily 3851072 11563706 Clocl_3291 Clostridium clariflavum DSM 19732 hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily YP_005047720.1 3850518 R 720554 CDS YP_005047721.1 374297530 11563707 complement(3851095..3851937) 1 NC_016627.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; hydro-lyase, Fe-S type, tartrate/fumarate subfamily 3851937 11563707 Clocl_3292 Clostridium clariflavum DSM 19732 hydro-lyase, Fe-S type, tartrate/fumarate subfamily YP_005047721.1 3851095 R 720554 CDS YP_005047722.1 374297531 11563708 3852285..3852677 1 NC_016627.1 PFAM: Universal stress protein family; universal stress family protein 3852677 11563708 Clocl_3293 Clostridium clariflavum DSM 19732 universal stress family protein YP_005047722.1 3852285 D 720554 CDS YP_005047723.1 374297532 11563709 3853068..3853346 1 NC_016627.1 PFAM: Bacterial DNA-binding protein; nucleoid DNA-binding protein 3853346 11563709 Clocl_3294 Clostridium clariflavum DSM 19732 nucleoid DNA-binding protein YP_005047723.1 3853068 D 720554 CDS YP_005047724.1 374297533 11563710 complement(3853418..3854227) 1 NC_016627.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A; sporulation transcription factor Spo0A 3854227 11563710 Clocl_3295 Clostridium clariflavum DSM 19732 sporulation transcription factor Spo0A YP_005047724.1 3853418 R 720554 CDS YP_005047725.1 374297534 11563711 complement(3854411..3855679) 1 NC_016627.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 3855679 11563711 Clocl_3296 Clostridium clariflavum DSM 19732 3-phosphoshikimate 1-carboxyvinyltransferase YP_005047725.1 3854411 R 720554 CDS YP_005047726.1 374297535 11563712 3856163..3857083 1 NC_016627.1 PFAM: Response regulator receiver domain; response regulator containing a CheY-like receiver domain and a GGDEF domain 3857083 11563712 Clocl_3297 Clostridium clariflavum DSM 19732 response regulator containing a CheY-like receiver domain and a GGDEF domain YP_005047726.1 3856163 D 720554 CDS YP_005047727.1 374297536 11563713 complement(3857141..3858277) 1 NC_016627.1 PFAM: Putative RNA methylase family UPF0020; THUMP domain; putative N6-adenine-specific DNA methylase 3858277 11563713 Clocl_3298 Clostridium clariflavum DSM 19732 putative N6-adenine-specific DNA methylase YP_005047727.1 3857141 R 720554 CDS YP_005047728.1 374297537 11563714 complement(3858509..3858853) 1 NC_016627.1 hypothetical protein 3858853 11563714 Clocl_3299 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047728.1 3858509 R 720554 CDS YP_005047729.1 374297538 11563715 3859449..3860291 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 3860291 11563715 Clocl_3302 Clostridium clariflavum DSM 19732 transglutaminase YP_005047729.1 3859449 D 720554 CDS YP_005047730.1 374297539 11563716 complement(3860352..3862850) 1 NC_016627.1 PFAM: Cohesin domain; S-layer homology domain; manually curated; putative S-layer protein 3862850 11563716 Clocl_3303 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005047730.1 3860352 R 720554 CDS YP_005047731.1 374297540 11563717 complement(3863480..3867592) 1 NC_016627.1 PFAM: Cohesin domain; S-layer homology domain; manually curated; putative S-layer protein 3867592 11563717 Clocl_3304 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005047731.1 3863480 R 720554 CDS YP_005047732.1 374297541 11563718 complement(3867605..3870988) 1 NC_016627.1 PFAM: Cohesin domain; manually curated; Cohesin domain protein 3870988 11563718 Clocl_3305 Clostridium clariflavum DSM 19732 Cohesin domain protein YP_005047732.1 3867605 R 720554 CDS YP_005047733.1 374297542 11563719 complement(3871166..3876289) 1 NC_016627.1 PFAM: Cellulose binding domain; Cohesin domain; Cellulose binding domain-containing protein 3876289 11563719 Clocl_3306 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein YP_005047733.1 3871166 R 720554 CDS YP_005047734.1 374297543 11563720 complement(3877236..3877883) 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; haloacid dehalogenase superfamily protein 3877883 11563720 Clocl_3307 Clostridium clariflavum DSM 19732 haloacid dehalogenase superfamily protein YP_005047734.1 3877236 R 720554 CDS YP_005047735.1 374297544 11563721 complement(3878199..3879617) 1 NC_016627.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; cell division protein FtsI/penicillin-binding protein 2 3879617 11563721 Clocl_3308 Clostridium clariflavum DSM 19732 cell division protein FtsI/penicillin-binding protein 2 YP_005047735.1 3878199 R 720554 CDS YP_005047736.1 374297545 11563722 complement(3879604..3880878) 1 NC_016627.1 PFAM: Cell cycle protein; cell division membrane protein 3880878 11563722 Clocl_3309 Clostridium clariflavum DSM 19732 cell division membrane protein YP_005047736.1 3879604 R 720554 CDS YP_005047737.1 374297546 11563723 3881085..3882476 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 3882476 11563723 Clocl_3310 Clostridium clariflavum DSM 19732 transposase family protein YP_005047737.1 3881085 D 720554 CDS YP_005047738.1 374297547 11563724 complement(3882516..3882968) 1 NC_016627.1 PFAM: FHA domain; FHA domain-containing protein 3882968 11563724 Clocl_3311 Clostridium clariflavum DSM 19732 FHA domain-containing protein YP_005047738.1 3882516 R 720554 CDS YP_005047739.1 374297548 11563725 3883492..3885024 1 NC_016627.1 PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 3885024 11563725 Clocl_3312 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005047739.1 3883492 D 720554 CDS YP_005047740.1 374297549 11563726 complement(3885084..3886637) 1 NC_016627.1 PFAM: Rhomboid family; hypothetical protein 3886637 11563726 Clocl_3313 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047740.1 3885084 R 720554 CDS YP_005047741.1 374297550 11563730 3893250..3894530 1 NC_016627.1 hypothetical protein 3894530 11563730 Clocl_3317 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047741.1 3893250 D 720554 CDS YP_005047742.1 374297551 11563731 3894781..3895506 1 NC_016627.1 PFAM: ABC transporter; multidrug ABC transporter ATPase 3895506 11563731 Clocl_3318 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase YP_005047742.1 3894781 D 720554 CDS YP_005047743.1 374297552 11563732 3895493..3896245 1 NC_016627.1 hypothetical protein 3896245 11563732 Clocl_3319 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047743.1 3895493 D 720554 CDS YP_005047744.1 374297553 11563733 3896248..3897732 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase,HAMP domain-containing protein,histidine kinase 3897732 11563733 Clocl_3320 Clostridium clariflavum DSM 19732 histidine kinase,HAMP domain-containing protein,histidine kinase YP_005047744.1 3896248 D 720554 CDS YP_005047745.1 374297554 11563734 3897729..3898424 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 3898424 11563734 Clocl_3321 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005047745.1 3897729 D 720554 CDS YP_005047746.1 374297555 11563735 complement(3898527..3900257) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase and permease 3900257 11563735 Clocl_3322 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005047746.1 3898527 R 720554 CDS YP_005047747.1 374297556 11563736 complement(3900385..3900819) 1 NC_016627.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein 3900819 11563736 Clocl_3323 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047747.1 3900385 R 720554 CDS YP_005047748.1 374297557 11563737 complement(3900992..3902071) 1 NC_016627.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; pilus retraction protein PilT 3902071 11563737 Clocl_3324 Clostridium clariflavum DSM 19732 pilus retraction protein PilT YP_005047748.1 3900992 R 720554 CDS YP_005047749.1 374297558 11563738 3902652..3903602 1 NC_016627.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase; L-lactate dehydrogenase 3903602 11563738 Clocl_3325 Clostridium clariflavum DSM 19732 L-lactate dehydrogenase YP_005047749.1 3902652 D 720554 CDS YP_005047750.1 374297559 11563739 3903635..3904807 1 NC_016627.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malic enzyme 3904807 11563739 Clocl_3326 Clostridium clariflavum DSM 19732 malic enzyme YP_005047750.1 3903635 D 720554 CDS YP_005047751.1 374297560 11563740 3905333..3907864 1 NC_016627.1 PFAM: GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat; Carbohydrate binding module (family 6); lysophospholipase L1-like esterase 3907864 11563740 Clocl_3327 Clostridium clariflavum DSM 19732 lysophospholipase L1-like esterase YP_005047751.1 3905333 D 720554 CDS YP_005047752.1 374297561 11563741 complement(3907924..3908670) 1 NC_016627.1 PFAM: CAAX amino terminal protease family; CAAX amino terminal protease 3908670 11563741 Clocl_3328 Clostridium clariflavum DSM 19732 CAAX amino terminal protease YP_005047752.1 3907924 R 720554 CDS YP_005047753.1 374297562 11563743 complement(3908965..3910779) 1 NC_016627.1 PFAM: MutS domain V; mismatch repair ATPase (MutS family) 3910779 11563743 Clocl_3330 Clostridium clariflavum DSM 19732 mismatch repair ATPase (MutS family) YP_005047753.1 3908965 R 720554 CDS YP_005047754.1 374297563 11563744 3911396..3912568 1 NC_016627.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase-like oxidoreductase 3912568 11563744 Clocl_3331 Clostridium clariflavum DSM 19732 phosphoglycerate dehydrogenase-like oxidoreductase YP_005047754.1 3911396 D 720554 CDS YP_005047755.1 374297564 11563745 complement(3912701..3913144) 1 NC_016627.1 PFAM: Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: intein N-terminal splicing region; transcription elongation factor 3913144 11563745 Clocl_3332 Clostridium clariflavum DSM 19732 transcription elongation factor YP_005047755.1 3912701 R 720554 CDS YP_005047756.1 374297565 11563746 complement(3913327..3914145) 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 3914145 11563746 Clocl_3333 Clostridium clariflavum DSM 19732 alpha/beta hydrolase YP_005047756.1 3913327 R 720554 CDS YP_005047757.1 374297566 11563747 complement(3914326..3915645) 1 NC_016627.1 PFAM: Cohesin domain; S-layer homology domain; putative S-layer protein 3915645 11563747 Clocl_3334 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005047757.1 3914326 R 720554 CDS YP_005047758.1 374297567 11563748 complement(3915974..3917173) 1 NC_016627.1 hypothetical protein 3917173 11563748 Clocl_3335 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047758.1 3915974 R 720554 CDS YP_005047759.1 374297568 11563749 3917412..3918347 1 NC_016627.1 hypothetical protein 3918347 11563749 Clocl_3336 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047759.1 3917412 D 720554 CDS YP_005047760.1 374297569 11563750 complement(3918577..3920346) 1 NC_016627.1 hypothetical protein 3920346 11563750 Clocl_3337 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047760.1 3918577 R 720554 CDS YP_005047761.1 374297570 11563751 complement(3920639..3922033) 1 NC_016627.1 PFAM: Sporulation and spore germination; sporulation/spore germination protein 3922033 11563751 Clocl_3338 Clostridium clariflavum DSM 19732 sporulation/spore germination protein YP_005047761.1 3920639 R 720554 CDS YP_005047762.1 374297571 11563752 complement(3922036..3922617) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 3922617 11563752 Clocl_3339 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005047762.1 3922036 R 720554 CDS YP_005047763.1 374297572 11563753 complement(3922830..3922997) 1 NC_016627.1 hypothetical protein 3922997 11563753 Clocl_3340 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047763.1 3922830 R 720554 CDS YP_005047764.1 374297573 11563754 complement(3922960..3924822) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase and permease 3924822 11563754 Clocl_3341 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005047764.1 3922960 R 720554 CDS YP_005047765.1 374297574 11563755 complement(3924819..3927038) 1 NC_016627.1 PFAM: ABC transporter; ABC transporter transmembrane region; multidrug ABC transporter ATPase and permease 3927038 11563755 Clocl_3342 Clostridium clariflavum DSM 19732 multidrug ABC transporter ATPase and permease YP_005047765.1 3924819 R 720554 CDS YP_005047766.1 374297575 11563756 complement(3927066..3927506) 1 NC_016627.1 PFAM: MarR family; transcriptional regulator 3927506 11563756 Clocl_3343 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005047766.1 3927066 R 720554 CDS YP_005047767.1 374297576 11563757 complement(3927683..3929047) 1 NC_016627.1 PFAM: Citrate synthase; citrate synthase 3929047 11563757 Clocl_3344 Clostridium clariflavum DSM 19732 citrate synthase YP_005047767.1 3927683 R 720554 CDS YP_005047768.1 374297577 11563758 complement(3929211..3929471) 1 NC_016627.1 PFAM: Uncharacterised protein family (UPF0153); putative Fe-S oxidoreductase 3929471 11563758 Clocl_3345 Clostridium clariflavum DSM 19732 putative Fe-S oxidoreductase YP_005047768.1 3929211 R 720554 CDS YP_005047769.1 374297578 11563759 3929807..3931207 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: amidophosphoribosyltransferase; glutamine phosphoribosylpyrophosphate amidotransferase 3931207 11563759 Clocl_3346 Clostridium clariflavum DSM 19732 glutamine phosphoribosylpyrophosphate amidotransferase YP_005047769.1 3929807 D 720554 CDS YP_005047770.1 374297579 11563760 complement(3931355..3931561) 1 NC_016627.1 hypothetical protein 3931561 11563760 Clocl_3347 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047770.1 3931355 R 720554 CDS YP_005047771.1 374297580 11563761 complement(3932075..3933385) 1 NC_016627.1 PFAM: Phosphotransferase enzyme family; DNA-binding domain-containing protein 3933385 11563761 Clocl_3348 Clostridium clariflavum DSM 19732 DNA-binding domain-containing protein YP_005047771.1 3932075 R 720554 CDS YP_005047772.1 374297581 11563762 complement(3933924..3937148) 1 NC_016627.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 3937148 11563762 Clocl_3349 Clostridium clariflavum DSM 19732 carbamoyl-phosphate synthase large subunit YP_005047772.1 3933924 R 720554 CDS YP_005047773.1 374297582 11563763 complement(3937494..3938291) 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 3938291 11563763 Clocl_3350 Clostridium clariflavum DSM 19732 HAD-superfamily hydrolase YP_005047773.1 3937494 R 720554 CDS YP_005047774.1 374297583 11563764 complement(3938468..3938734) 1 NC_016627.1 hypothetical protein 3938734 11563764 Clocl_3351 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047774.1 3938468 R 720554 CDS YP_005047775.1 374297584 11563765 complement(3938739..3939254) 1 NC_016627.1 PFAM: Protein of unknown function (DUF458); hypothetical protein 3939254 11563765 Clocl_3352 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047775.1 3938739 R 720554 CDS YP_005047776.1 374297585 11563766 complement(3939542..3939676) 1 NC_016627.1 hypothetical protein 3939676 11563766 Clocl_3353 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047776.1 3939542 R 720554 CDS YP_005047777.1 374297586 11563767 complement(3939844..3942087) 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 3942087 11563767 Clocl_3354 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005047777.1 3939844 R 720554 CDS YP_005047778.1 374297587 11563768 3942413..3942559 1 NC_016627.1 hypothetical protein 3942559 11563768 Clocl_3355 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047778.1 3942413 D 720554 CDS YP_005047779.1 374297588 11563769 complement(3942657..3943397) 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 3943397 11563769 Clocl_3356 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005047779.1 3942657 R 720554 CDS YP_005047780.1 374297589 11563770 3943764..3947210 1 NC_016627.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; Iron hydrogenase small subunit; TIGRFAM: putative selenate reductase, YgfK subunit; hydrogenase, Fe-only; hydrogenase, Fe-only 3947210 11563770 Clocl_3357 Clostridium clariflavum DSM 19732 hydrogenase, Fe-only YP_005047780.1 3943764 D 720554 CDS YP_005047781.1 374297590 11563771 complement(3947298..3949262) 1 NC_016627.1 hypothetical protein 3949262 11563771 Clocl_3358 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047781.1 3947298 R 720554 CDS YP_005047782.1 374297591 11563772 complement(3949265..3949759) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 3949759 11563772 Clocl_3359 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005047782.1 3949265 R 720554 CDS YP_005047783.1 374297592 11563773 complement(3950179..3951096) 1 NC_016627.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 3951096 11563773 Clocl_3360 Clostridium clariflavum DSM 19732 cation diffusion facilitator family transporter YP_005047783.1 3950179 R 720554 CDS YP_005047784.1 374297593 11563774 3951931..3955188 1 NC_016627.1 PFAM: Dockerin type I repeat; Polysaccharide deacetylase; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; putative xylanase/chitin deacetylase 3955188 11563774 Clocl_3361 Clostridium clariflavum DSM 19732 putative xylanase/chitin deacetylase YP_005047784.1 3951931 D 720554 CDS YP_005047785.1 374297594 11563775 complement(3955438..3957405) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 3957405 11563775 Clocl_3362 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005047785.1 3955438 R 720554 CDS YP_005047786.1 374297595 11563776 complement(3957380..3958075) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 3958075 11563776 Clocl_3363 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005047786.1 3957380 R 720554 CDS YP_005047787.1 374297596 11563777 complement(3958397..3958990) 1 NC_016627.1 PFAM: Rubrerythrin; rubrerythrin 3958990 11563777 Clocl_3364 Clostridium clariflavum DSM 19732 rubrerythrin YP_005047787.1 3958397 R 720554 CDS YP_005047788.1 374297597 11563778 complement(3959215..3960030) 1 NC_016627.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase 3960030 11563778 Clocl_3365 Clostridium clariflavum DSM 19732 undecaprenyl-diphosphatase YP_005047788.1 3959215 R 720554 CDS YP_005047789.1 374297598 11563779 complement(3960356..3960979) 1 NC_016627.1 PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein; phosphate transport regulator related to PhoU 3960979 11563779 Clocl_3366 Clostridium clariflavum DSM 19732 phosphate transport regulator related to PhoU YP_005047789.1 3960356 R 720554 CDS YP_005047790.1 374297599 11563780 complement(3961064..3962116) 1 NC_016627.1 PFAM: Phosphate transporter family; phosphate/sulfate permease 3962116 11563780 Clocl_3367 Clostridium clariflavum DSM 19732 phosphate/sulfate permease YP_005047790.1 3961064 R 720554 CDS YP_005047791.1 374297600 11563781 3962541..3963149 1 NC_016627.1 PFAM: Predicted membrane protein (DUF2324); manually curated; hypothetical protein 3963149 11563781 Clocl_3368 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047791.1 3962541 D 720554 CDS YP_005047792.1 374297601 11563782 3963146..3963571 1 NC_016627.1 hypothetical protein 3963571 11563782 Clocl_3369 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047792.1 3963146 D 720554 CDS YP_005047793.1 374297602 11563784 complement(3964738..3965610) 1 NC_016627.1 hypothetical protein 3965610 11563784 Clocl_3371 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047793.1 3964738 R 720554 CDS YP_005047794.1 374297603 11563785 complement(3965672..3966232) 1 NC_016627.1 hypothetical protein 3966232 11563785 Clocl_3372 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047794.1 3965672 R 720554 CDS YP_005047795.1 374297604 11563786 complement(3966493..3966750) 1 NC_016627.1 hypothetical protein 3966750 11563786 Clocl_3373 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047795.1 3966493 R 720554 CDS YP_005047796.1 374297605 11563787 3967092..3967949 1 NC_016627.1 hypothetical protein 3967949 11563787 Clocl_3374 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047796.1 3967092 D 720554 CDS YP_005047797.1 374297606 11563788 3967946..3969175 1 NC_016627.1 PFAM: Glutathionylspermidine synthase; glutathionylspermidine synthase 3969175 11563788 Clocl_3375 Clostridium clariflavum DSM 19732 glutathionylspermidine synthase YP_005047797.1 3967946 D 720554 CDS YP_005047798.1 374297607 11563789 3969165..3969917 1 NC_016627.1 hypothetical protein 3969917 11563789 Clocl_3376 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047798.1 3969165 D 720554 CDS YP_005047799.1 374297608 11563790 3970185..3971075 1 NC_016627.1 hypothetical protein 3971075 11563790 Clocl_3377 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047799.1 3970185 D 720554 CDS YP_005047800.1 374297609 11563791 3971090..3972397 1 NC_016627.1 PFAM: DnaJ domain; DnaJ-class molecular chaperone with C-terminal Zn finger domain 3972397 11563791 Clocl_3378 Clostridium clariflavum DSM 19732 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005047800.1 3971090 D 720554 CDS YP_005047801.1 374297610 11563792 complement(3972751..3973674) 1 NC_016627.1 hypothetical protein 3973674 11563792 Clocl_3379 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047801.1 3972751 R 720554 CDS YP_005047802.1 374297611 11563793 complement(3973676..3974470) 1 NC_016627.1 PFAM: Domain of unknown function (DUF955); putative Zn peptidase 3974470 11563793 Clocl_3380 Clostridium clariflavum DSM 19732 putative Zn peptidase YP_005047802.1 3973676 R 720554 CDS YP_005047803.1 374297612 11563794 complement(3974460..3974858) 1 NC_016627.1 hypothetical protein 3974858 11563794 Clocl_3381 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047803.1 3974460 R 720554 CDS YP_005047804.1 374297613 11563795 complement(3975148..3978912) 1 NC_016627.1 PFAM: UvrD/REP helicase; TIGRFAM: helicase-exonuclease AddAB, AddA subunit, Firmicutes type; recombination helicase AddA 3978912 11563795 Clocl_3382 Clostridium clariflavum DSM 19732 recombination helicase AddA YP_005047804.1 3975148 R 720554 CDS YP_005047805.1 374297614 11563796 complement(3978953..3982426) 1 NC_016627.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: helicase-exonuclease AddAB, AddB subunit; DNA helicase/exodeoxyribonuclease V subunit B 3982426 11563796 Clocl_3383 Clostridium clariflavum DSM 19732 DNA helicase/exodeoxyribonuclease V subunit B YP_005047805.1 3978953 R 720554 CDS YP_005047806.1 374297615 11563797 complement(3982686..3983198) 1 NC_016627.1 manually curated; hypothetical protein 3983198 11563797 Clocl_3384 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047806.1 3982686 R 720554 CDS YP_005047807.1 374297616 11563798 complement(3983224..3983637) 1 NC_016627.1 manually curated; hypothetical protein 3983637 11563798 Clocl_3385 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047807.1 3983224 R 720554 CDS YP_005047808.1 374297617 11563799 complement(3984018..3985553) 1 NC_016627.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; manually curated; hypothetical protein 3985553 11563799 Clocl_3386 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047808.1 3984018 R 720554 CDS YP_005047809.1 374297618 11563800 complement(3985555..3987780) 1 NC_016627.1 PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; bacteriocin ABC transporter 3987780 11563800 Clocl_3387 Clostridium clariflavum DSM 19732 bacteriocin ABC transporter YP_005047809.1 3985555 R 720554 CDS YP_005047810.1 374297619 11563801 3988025..3989416 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 3989416 11563801 Clocl_3388 Clostridium clariflavum DSM 19732 transposase family protein YP_005047810.1 3988025 D 720554 CDS YP_005047811.1 374297620 11563802 complement(3989578..3990033) 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 3990033 11563802 Clocl_3389 Clostridium clariflavum DSM 19732 transposase YP_005047811.1 3989578 R 720554 CDS YP_005047812.1 374297621 11563803 complement(3990247..3991881) 1 NC_016627.1 PFAM: AMP-binding enzyme; acyl-CoA synthetase 3991881 11563803 Clocl_3390 Clostridium clariflavum DSM 19732 acyl-CoA synthetase YP_005047812.1 3990247 R 720554 CDS YP_005047813.1 374297622 11563804 complement(3992224..3993219) 1 NC_016627.1 PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase 3993219 11563804 Clocl_3391 Clostridium clariflavum DSM 19732 methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase YP_005047813.1 3992224 R 720554 CDS YP_005047814.1 374297623 11563805 3993532..3993762 1 NC_016627.1 hypothetical protein 3993762 11563805 Clocl_3392 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047814.1 3993532 D 720554 CDS YP_005047815.1 374297624 11563806 3993952..3994674 1 NC_016627.1 PFAM: short chain dehydrogenase; dehydrogenase 3994674 11563806 Clocl_3393 Clostridium clariflavum DSM 19732 dehydrogenase YP_005047815.1 3993952 D 720554 CDS YP_005047816.1 374297625 11563807 3994937..3996955 1 NC_016627.1 PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); 1,4-alpha-glucan-branching protein 3996955 11563807 Clocl_3394 Clostridium clariflavum DSM 19732 1,4-alpha-glucan-branching protein YP_005047816.1 3994937 D 720554 CDS YP_005047817.1 374297626 11563808 3997445..3999388 1 NC_016627.1 PFAM: Cohesin domain; Cohesin domain protein 3999388 11563808 Clocl_3395 Clostridium clariflavum DSM 19732 Cohesin domain protein YP_005047817.1 3997445 D 720554 CDS YP_005047818.1 374297627 11563809 3999637..4001466 1 NC_016627.1 PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase 4001466 11563809 Clocl_3396 Clostridium clariflavum DSM 19732 AMP-forming long-chain acyl-CoA synthetase YP_005047818.1 3999637 D 720554 CDS YP_005047819.1 374297628 11563810 complement(4001584..4001691) 1 NC_016627.1 hypothetical protein 4001691 11563810 Clocl_3397 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047819.1 4001584 R 720554 CDS YP_005047820.1 374297629 11563811 complement(4001831..4004386) 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 4004386 11563811 Clocl_3398 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005047820.1 4001831 R 720554 CDS YP_005047821.1 374297630 11563812 4004803..4006092 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4006092 11563812 Clocl_3399 Clostridium clariflavum DSM 19732 transposase YP_005047821.1 4004803 D 720554 CDS YP_005047822.1 374297631 11563813 complement(4006483..4007550) 1 NC_016627.1 PFAM: FIST C domain; FIST N domain; FIST domain-containing protein 4007550 11563813 Clocl_3400 Clostridium clariflavum DSM 19732 FIST domain-containing protein YP_005047822.1 4006483 R 720554 CDS YP_005047823.1 374297632 11563814 4008135..4008371 1 NC_016627.1 hypothetical protein 4008371 11563814 Clocl_3401 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047823.1 4008135 D 720554 CDS YP_005047824.1 374297633 11563815 4008680..4010863 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 4010863 11563815 Clocl_3402 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005047824.1 4008680 D 720554 CDS YP_005047825.1 374297634 11563816 complement(4010891..4011253) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1667); hypothetical protein 4011253 11563816 Clocl_3403 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047825.1 4010891 R 720554 CDS YP_005047826.1 374297635 11563817 complement(4011243..4012484) 1 NC_016627.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 4012484 11563817 Clocl_3404 Clostridium clariflavum DSM 19732 thioredoxin reductase YP_005047826.1 4011243 R 720554 CDS YP_005047827.1 374297636 11563818 complement(4012498..4013952) 1 NC_016627.1 PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase; putative dehydrogenase 4013952 11563818 Clocl_3405 Clostridium clariflavum DSM 19732 putative dehydrogenase YP_005047827.1 4012498 R 720554 CDS YP_005047828.1 374297637 11563819 complement(4014233..4015852) 1 NC_016627.1 hypothetical protein 4015852 11563819 Clocl_3406 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047828.1 4014233 R 720554 CDS YP_005047829.1 374297638 11563820 complement(4015882..4016676) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 4016676 11563820 Clocl_3407 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005047829.1 4015882 R 720554 CDS YP_005047830.1 374297639 11563821 complement(4016727..4017524) 1 NC_016627.1 PFAM: Xylose isomerase-like TIM barrel; sugar phosphate isomerase/epimerase 4017524 11563821 Clocl_3408 Clostridium clariflavum DSM 19732 sugar phosphate isomerase/epimerase YP_005047830.1 4016727 R 720554 CDS YP_005047831.1 374297640 11563822 complement(4017521..4018510) 1 NC_016627.1 hypothetical protein 4018510 11563822 Clocl_3409 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047831.1 4017521 R 720554 CDS YP_005047832.1 374297641 11563823 complement(4018555..4019496) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 4019496 11563823 Clocl_3410 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005047832.1 4018555 R 720554 CDS YP_005047833.1 374297642 11563824 complement(4019499..4020614) 1 NC_016627.1 PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase 4020614 11563824 Clocl_3411 Clostridium clariflavum DSM 19732 FAD dependent oxidoreductase YP_005047833.1 4019499 R 720554 CDS YP_005047834.1 374297643 11563825 complement(4020938..4022560) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4022560 11563825 Clocl_3412 Clostridium clariflavum DSM 19732 transposase YP_005047834.1 4020938 R 720554 CDS YP_005047835.1 374297644 11563826 complement(4022692..4023009) 1 NC_016627.1 hypothetical protein 4023009 11563826 Clocl_3413 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047835.1 4022692 R 720554 CDS YP_005047836.1 374297645 11563827 complement(4023044..4023574) 1 NC_016627.1 PFAM: Ferritin-like domain; ferritin-like protein 4023574 11563827 Clocl_3414 Clostridium clariflavum DSM 19732 ferritin-like protein YP_005047836.1 4023044 R 720554 CDS YP_005047837.1 374297646 11563828 complement(4023762..4024727) 1 NC_016627.1 PFAM: Domain of unknown function (DUF227); putative homoserine kinase type II (protein kinase fold) 4024727 11563828 Clocl_3415 Clostridium clariflavum DSM 19732 putative homoserine kinase type II (protein kinase fold) YP_005047837.1 4023762 R 720554 CDS YP_005047838.1 374297647 11563829 complement(4025299..4025856) 1 NC_016627.1 PFAM: Hemerythrin HHE cation binding domain; hypothetical protein 4025856 11563829 Clocl_3416 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047838.1 4025299 R 720554 CDS YP_005047839.1 374297648 11563830 complement(4026034..4027830) 1 NC_016627.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase subunit 1, adenylylsulfate kinase 4027830 11563830 Clocl_3417 Clostridium clariflavum DSM 19732 sulfate adenylyltransferase subunit 1, adenylylsulfate kinase YP_005047839.1 4026034 R 720554 CDS YP_005047840.1 374297649 11563831 complement(4027832..4028713) 1 NC_016627.1 PFAM: Phosphoadenosine phosphosulfate reductase family; PAPS reductase/FAD synthetase family protein 4028713 11563831 Clocl_3418 Clostridium clariflavum DSM 19732 PAPS reductase/FAD synthetase family protein YP_005047840.1 4027832 R 720554 CDS YP_005047841.1 374297650 11563832 complement(4028716..4029441) 1 NC_016627.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); thioredoxin-dependent phosophoadenylyl-sulfate reductase 4029441 11563832 Clocl_3419 Clostridium clariflavum DSM 19732 thioredoxin-dependent phosophoadenylyl-sulfate reductase YP_005047841.1 4028716 R 720554 CDS YP_005047842.1 374297651 11563833 complement(4029492..4031105) 1 NC_016627.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; sulfite reductase subunit beta (hemoprotein) 4031105 11563833 Clocl_3420 Clostridium clariflavum DSM 19732 sulfite reductase subunit beta (hemoprotein) YP_005047842.1 4029492 R 720554 CDS YP_005047843.1 374297652 11563834 complement(4031521..4032660) 1 NC_016627.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine beta-lyase/cystathionine gamma-synthase 4032660 11563834 Clocl_3421 Clostridium clariflavum DSM 19732 cystathionine beta-lyase/cystathionine gamma-synthase YP_005047843.1 4031521 R 720554 CDS YP_005047844.1 374297653 11563835 complement(4032981..4036070) 1 NC_016627.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 4036070 11563835 Clocl_3422 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005047844.1 4032981 R 720554 CDS YP_005047845.1 374297654 11563836 complement(4036406..4036894) 1 NC_016627.1 hypothetical protein 4036894 11563836 Clocl_3423 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047845.1 4036406 R 720554 CDS YP_005047846.1 374297655 11563837 4037030..4037683 1 NC_016627.1 hypothetical protein 4037683 11563837 Clocl_3424 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047846.1 4037030 D 720554 CDS YP_005047847.1 374297656 11563838 complement(4037864..4038565) 1 NC_016627.1 hypothetical protein 4038565 11563838 Clocl_3425 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047847.1 4037864 R 720554 CDS YP_005047848.1 374297657 11563839 complement(4038760..4039644) 1 NC_016627.1 PFAM: Radical SAM superfamily; DNA repair photolyase 4039644 11563839 Clocl_3426 Clostridium clariflavum DSM 19732 DNA repair photolyase YP_005047848.1 4038760 R 720554 CDS YP_005047849.1 374297658 11563840 complement(4039756..4041165) 1 NC_016627.1 hypothetical protein 4041165 11563840 Clocl_3427 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047849.1 4039756 R 720554 CDS YP_005047850.1 374297659 11563841 complement(4041440..4041955) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1706); hypothetical protein 4041955 11563841 Clocl_3428 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047850.1 4041440 R 720554 CDS YP_005047851.1 374297660 11563842 complement(4042031..4042927) 1 NC_016627.1 PFAM: HTH domain; putative transcriptional regulator 4042927 11563842 Clocl_3429 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047851.1 4042031 R 720554 CDS YP_005047852.1 374297661 11563843 complement(4043374..4044498) 1 NC_016627.1 PFAM: SPFH domain / Band 7 family; membrane protease subunit, stomatin/prohibitin 4044498 11563843 Clocl_3430 Clostridium clariflavum DSM 19732 membrane protease subunit, stomatin/prohibitin YP_005047852.1 4043374 R 720554 CDS YP_005047853.1 374297662 11563845 4045480..4045869 1 NC_016627.1 PFAM: Penicillinase repressor; putative transcriptional regulator 4045869 11563845 Clocl_3432 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047853.1 4045480 D 720554 CDS YP_005047854.1 374297663 11563846 4045872..4046969 1 NC_016627.1 PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein 4046969 11563846 Clocl_3433 Clostridium clariflavum DSM 19732 antirepressor regulating drug resistance protein YP_005047854.1 4045872 D 720554 CDS YP_005047855.1 374297664 11563847 4046997..4047854 1 NC_016627.1 hypothetical protein 4047854 11563847 Clocl_3434 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047855.1 4046997 D 720554 CDS YP_005047856.1 374297665 11563848 complement(4048045..4048992) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 4048992 11563848 Clocl_3435 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047856.1 4048045 R 720554 CDS YP_005047857.1 374297666 11563849 complement(4049554..4050651) 1 NC_016627.1 PFAM: HD domain; Protein of unknown function (DUF1113); hypothetical protein 4050651 11563849 Clocl_3436 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047857.1 4049554 R 720554 CDS YP_005047858.1 374297667 11563851 complement(4051390..4051914) 1 NC_016627.1 hypothetical protein 4051914 11563851 Clocl_3438 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047858.1 4051390 R 720554 CDS YP_005047859.1 374297668 11563852 complement(4052225..4052656) 1 NC_016627.1 hypothetical protein 4052656 11563852 Clocl_3439 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047859.1 4052225 R 720554 CDS YP_005047860.1 374297669 11563854 4057621..4059120 1 NC_016627.1 hypothetical protein 4059120 11563854 Clocl_3441 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047860.1 4057621 D 720554 CDS YP_005047861.1 374297670 11563855 complement(4059801..4060322) 1 NC_016627.1 hypothetical protein 4060322 11563855 Clocl_3442 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047861.1 4059801 R 720554 CDS YP_005047862.1 374297671 11563856 4060829..4061188 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 4061188 11563856 Clocl_3443 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005047862.1 4060829 D 720554 CDS YP_005047863.1 374297672 11563858 complement(4061483..4062103) 1 NC_016627.1 hypothetical protein 4062103 11563858 Clocl_3445 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047863.1 4061483 R 720554 CDS YP_005047864.1 374297673 11563859 complement(4062259..4062606) 1 NC_016627.1 hypothetical protein 4062606 11563859 Clocl_3446 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047864.1 4062259 R 720554 CDS YP_005047865.1 374297674 11563860 complement(4062782..4065172) 1 NC_016627.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E; stage II sporulation protein E 4065172 11563860 Clocl_3447 Clostridium clariflavum DSM 19732 stage II sporulation protein E YP_005047865.1 4062782 R 720554 CDS YP_005047866.1 374297675 11563861 4065260..4065475 1 NC_016627.1 hypothetical protein 4065475 11563861 Clocl_3448 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047866.1 4065260 D 720554 CDS YP_005047867.1 374297676 11563863 complement(4066576..4066995) 1 NC_016627.1 hypothetical protein 4066995 11563863 Clocl_3450 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047867.1 4066576 R 720554 CDS YP_005047868.1 374297677 11563864 complement(4067096..4067884) 1 NC_016627.1 PFAM: Nucleotidyltransferase domain; nucleotidyltransferase family protein 4067884 11563864 Clocl_3451 Clostridium clariflavum DSM 19732 nucleotidyltransferase family protein YP_005047868.1 4067096 R 720554 CDS YP_005047869.1 374297678 11563865 complement(4067984..4070584) 1 NC_016627.1 hypothetical protein 4070584 11563865 Clocl_3452 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047869.1 4067984 R 720554 CDS YP_005047870.1 374297679 11563866 complement(4070581..4071351) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 4071351 11563866 Clocl_3453 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047870.1 4070581 R 720554 CDS YP_005047871.1 374297680 11563868 complement(4073544..4076156) 1 NC_016627.1 hypothetical protein 4076156 11563868 Clocl_3455 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047871.1 4073544 R 720554 CDS YP_005047872.1 374297681 11563869 complement(4076153..4076923) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 4076923 11563869 Clocl_3456 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047872.1 4076153 R 720554 CDS YP_005047873.1 374297682 11563871 complement(4078840..4079031) 1 NC_016627.1 hypothetical protein 4079031 11563871 Clocl_3458 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047873.1 4078840 R 720554 CDS YP_005047874.1 374297683 11563874 4081415..4081651 1 NC_016627.1 hypothetical protein 4081651 11563874 Clocl_3461 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047874.1 4081415 D 720554 CDS YP_005047875.1 374297684 11563875 complement(4081927..4084527) 1 NC_016627.1 hypothetical protein 4084527 11563875 Clocl_3462 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047875.1 4081927 R 720554 CDS YP_005047876.1 374297685 11563876 complement(4084524..4085294) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; copper amine oxidase family protein 4085294 11563876 Clocl_3463 Clostridium clariflavum DSM 19732 copper amine oxidase family protein YP_005047876.1 4084524 R 720554 CDS YP_005047877.1 374297686 11563879 complement(4087388..4088146) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 4088146 11563879 Clocl_3466 Clostridium clariflavum DSM 19732 DNA replication protein YP_005047877.1 4087388 R 720554 CDS YP_005047878.1 374297687 11563880 complement(4088146..4089633) 1 NC_016627.1 PFAM: Integrase core domain; transposase 4089633 11563880 Clocl_3467 Clostridium clariflavum DSM 19732 transposase YP_005047878.1 4088146 R 720554 CDS YP_005047879.1 374297688 11563881 complement(4089978..4090427) 1 NC_016627.1 hypothetical protein 4090427 11563881 Clocl_3468 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047879.1 4089978 R 720554 CDS YP_005047880.1 374297689 11563882 complement(4090440..4092053) 1 NC_016627.1 hypothetical protein 4092053 11563882 Clocl_3469 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047880.1 4090440 R 720554 CDS YP_005047881.1 374297690 11563885 complement(4093127..4093717) 1 NC_016627.1 PFAM: Pentapeptide repeats (8 copies); putative low-complexity protein 4093717 11563885 Clocl_3472 Clostridium clariflavum DSM 19732 putative low-complexity protein YP_005047881.1 4093127 R 720554 CDS YP_005047882.1 374297691 11563886 complement(4093739..4094812) 1 NC_016627.1 hypothetical protein 4094812 11563886 Clocl_3473 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047882.1 4093739 R 720554 CDS YP_005047883.1 374297692 11563887 complement(4095033..4095494) 1 NC_016627.1 hypothetical protein 4095494 11563887 Clocl_3474 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047883.1 4095033 R 720554 CDS YP_005047884.1 374297693 11563888 complement(4095527..4098076) 1 NC_016627.1 hypothetical protein 4098076 11563888 Clocl_3475 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047884.1 4095527 R 720554 CDS YP_005047885.1 374297694 11563889 complement(4098049..4099575) 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; transglutaminase 4099575 11563889 Clocl_3476 Clostridium clariflavum DSM 19732 transglutaminase YP_005047885.1 4098049 R 720554 CDS YP_005047886.1 374297695 11563893 complement(4105994..4106170) 1 NC_016627.1 hypothetical protein 4106170 11563893 Clocl_3480 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047886.1 4105994 R 720554 CDS YP_005047887.1 374297696 11563894 complement(4106222..4107196) 1 NC_016627.1 hypothetical protein 4107196 11563894 Clocl_3481 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047887.1 4106222 R 720554 CDS YP_005047888.1 374297697 11563895 complement(4107889..4108071) 1 NC_016627.1 hypothetical protein 4108071 11563895 Clocl_3482 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047888.1 4107889 R 720554 CDS YP_005047889.1 374297698 11563896 complement(4108421..4109728) 1 NC_016627.1 hypothetical protein 4109728 11563896 Clocl_3483 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047889.1 4108421 R 720554 CDS YP_005047890.1 374297699 11563897 complement(4109872..4111206) 1 NC_016627.1 PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); Mg2+ transporter MgtE 4111206 11563897 Clocl_3484 Clostridium clariflavum DSM 19732 Mg2+ transporter MgtE YP_005047890.1 4109872 R 720554 CDS YP_005047891.1 374297700 11563898 complement(4111221..4111319) 1 NC_016627.1 hypothetical protein 4111319 11563898 Clocl_3485 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047891.1 4111221 R 720554 CDS YP_005047892.1 374297701 11563899 complement(4111908..4112894) 1 NC_016627.1 hypothetical protein 4112894 11563899 Clocl_3486 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047892.1 4111908 R 720554 CDS YP_005047893.1 374297702 11563900 complement(4112903..4114975) 1 NC_016627.1 PFAM: Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 4114975 11563900 Clocl_3487 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005047893.1 4112903 R 720554 CDS YP_005047894.1 374297703 11563901 complement(4115396..4116151) 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; lysophospholipase 4116151 11563901 Clocl_3488 Clostridium clariflavum DSM 19732 lysophospholipase YP_005047894.1 4115396 R 720554 CDS YP_005047895.1 374297704 11563902 complement(4116266..4117144) 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; DNA-binding domain-containing protein 4117144 11563902 Clocl_3489 Clostridium clariflavum DSM 19732 DNA-binding domain-containing protein YP_005047895.1 4116266 R 720554 CDS YP_005047896.1 374297705 11563903 complement(4117210..4117959) 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 4117959 11563903 Clocl_3490 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005047896.1 4117210 R 720554 CDS YP_005047897.1 374297706 11563904 complement(4117976..4118713) 1 NC_016627.1 manually curated; hypothetical protein 4118713 11563904 Clocl_3491 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047897.1 4117976 R 720554 CDS YP_005047898.1 374297707 11563905 4119209..4119772 1 NC_016627.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 4119772 11563905 Clocl_3492 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005047898.1 4119209 D 720554 CDS YP_005047899.1 374297708 11563906 4119955..4120557 1 NC_016627.1 hypothetical protein 4120557 11563906 Clocl_3493 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047899.1 4119955 D 720554 CDS YP_005047900.1 374297709 11563907 4120560..4122665 1 NC_016627.1 PFAM: MMPL family; putative RND superfamily exporter 4122665 11563907 Clocl_3494 Clostridium clariflavum DSM 19732 putative RND superfamily exporter YP_005047900.1 4120560 D 720554 CDS YP_005047901.1 374297710 11563908 4122655..4124949 1 NC_016627.1 TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats; X-X-X-Leu-X-X-Gly heptad repeat-containing protein 4124949 11563908 Clocl_3495 Clostridium clariflavum DSM 19732 X-X-X-Leu-X-X-Gly heptad repeat-containing protein YP_005047901.1 4122655 D 720554 CDS YP_005047902.1 374297711 11563909 complement(4125114..4125650) 1 NC_016627.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase; dCTP deaminase 4125650 11563909 Clocl_3496 Clostridium clariflavum DSM 19732 dCTP deaminase YP_005047902.1 4125114 R 720554 CDS YP_005047903.1 374297712 11563910 complement(4125891..4126268) 1 NC_016627.1 hypothetical protein 4126268 11563910 Clocl_3497 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047903.1 4125891 R 720554 CDS YP_005047904.1 374297713 11563911 complement(4126411..4127079) 1 NC_016627.1 hypothetical protein 4127079 11563911 Clocl_3498 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047904.1 4126411 R 720554 CDS YP_005047905.1 374297714 11563912 complement(4127182..4127673) 1 NC_016627.1 PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5''-phosphate oxidase 4127673 11563912 Clocl_3499 Clostridium clariflavum DSM 19732 Pyridoxamine 5''-phosphate oxidase YP_005047905.1 4127182 R 720554 CDS YP_005047906.1 374297715 11563914 complement(4129163..4129993) 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 4129993 11563914 Clocl_3501 Clostridium clariflavum DSM 19732 HAD-superfamily hydrolase YP_005047906.1 4129163 R 720554 CDS YP_005047907.1 374297716 11563915 complement(4131079..4131870) 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 4131870 11563915 Clocl_3502 Clostridium clariflavum DSM 19732 alpha/beta hydrolase YP_005047907.1 4131079 R 720554 CDS YP_005047908.1 374297717 11563916 complement(4131919..4133046) 1 NC_016627.1 PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family; MGT family glycosyltransferase 4133046 11563916 Clocl_3503 Clostridium clariflavum DSM 19732 MGT family glycosyltransferase YP_005047908.1 4131919 R 720554 CDS YP_005047909.1 374297718 11563917 complement(4133272..4133616) 1 NC_016627.1 hypothetical protein 4133616 11563917 Clocl_3504 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047909.1 4133272 R 720554 CDS YP_005047910.1 374297719 11563918 complement(4133974..4135524) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4135524 11563918 Clocl_3505 Clostridium clariflavum DSM 19732 transposase YP_005047910.1 4133974 R 720554 CDS YP_005047911.1 374297720 11563921 complement(4136244..4136900) 1 NC_016627.1 PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 4136900 11563921 Clocl_3508 Clostridium clariflavum DSM 19732 NADPH-dependent FMN reductase YP_005047911.1 4136244 R 720554 CDS YP_005047912.1 374297721 11563922 complement(4137086..4139044) 1 NC_016627.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis protein 4139044 11563922 Clocl_3509 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005047912.1 4137086 R 720554 CDS YP_005047913.1 374297722 11563923 complement(4140161..4141231) 1 NC_016627.1 PFAM: Integrase core domain; transposase, IS30 family 4141231 11563923 Clocl_3510 Clostridium clariflavum DSM 19732 transposase, IS30 family YP_005047913.1 4140161 R 720554 CDS YP_005047914.1 374297723 11563924 4141430..4142806 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4142806 11563924 Clocl_3511 Clostridium clariflavum DSM 19732 transposase YP_005047914.1 4141430 D 720554 CDS YP_005047915.1 374297724 11563925 complement(4142847..4145213) 1 NC_016627.1 PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein 4145213 11563925 Clocl_3512 Clostridium clariflavum DSM 19732 antirepressor regulating drug resistance protein YP_005047915.1 4142847 R 720554 CDS YP_005047916.1 374297725 11563926 4145634..4146923 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4146923 11563926 Clocl_3513 Clostridium clariflavum DSM 19732 transposase YP_005047916.1 4145634 D 720554 CDS YP_005047917.1 374297726 11563927 complement(4147420..4148478) 1 NC_016627.1 hypothetical protein 4148478 11563927 Clocl_3514 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047917.1 4147420 R 720554 CDS YP_005047918.1 374297727 11563928 complement(4148570..4149100) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 4149100 11563928 Clocl_3515 Clostridium clariflavum DSM 19732 acetyltransferase, ribosomal protein N-acetylase YP_005047918.1 4148570 R 720554 CDS YP_005047919.1 374297728 11563929 complement(4149505..4151055) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4151055 11563929 Clocl_3516 Clostridium clariflavum DSM 19732 transposase YP_005047919.1 4149505 R 720554 CDS YP_005047920.1 374297729 11563930 4151288..4151476 1 NC_016627.1 hypothetical protein 4151476 11563930 Clocl_3517 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047920.1 4151288 D 720554 CDS YP_005047921.1 374297730 11563931 complement(4151692..4153215) 1 NC_016627.1 hypothetical protein 4153215 11563931 Clocl_3518 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047921.1 4151692 R 720554 CDS YP_005047922.1 374297731 11563932 complement(4153267..4153680) 1 NC_016627.1 PFAM: EamA-like transporter family; hypothetical protein 4153680 11563932 Clocl_3519 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047922.1 4153267 R 720554 CDS YP_005047923.1 374297732 11563933 complement(4153885..4154874) 1 NC_016627.1 hypothetical protein 4154874 11563933 Clocl_3520 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047923.1 4153885 R 720554 CDS YP_005047924.1 374297733 11563934 4155299..4156105 1 NC_016627.1 PFAM: Glycosyl transferase family 8; LPS:glycosyltransferase 4156105 11563934 Clocl_3521 Clostridium clariflavum DSM 19732 LPS:glycosyltransferase YP_005047924.1 4155299 D 720554 CDS YP_005047925.1 374297734 11563935 complement(4156241..4156909) 1 NC_016627.1 PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain; PP-loop superfamily ATP-utilizing enzyme 4156909 11563935 Clocl_3522 Clostridium clariflavum DSM 19732 PP-loop superfamily ATP-utilizing enzyme YP_005047925.1 4156241 R 720554 CDS YP_005047926.1 374297735 11563936 complement(4156984..4157778) 1 NC_016627.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 4157778 11563936 Clocl_3523 Clostridium clariflavum DSM 19732 phosphomethylpyrimidine kinase YP_005047926.1 4156984 R 720554 CDS YP_005047927.1 374297736 11563937 complement(4157875..4158579) 1 NC_016627.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily protein 4158579 11563937 Clocl_3524 Clostridium clariflavum DSM 19732 haloacid dehalogenase superfamily protein YP_005047927.1 4157875 R 720554 CDS YP_005047928.1 374297737 11563938 complement(4158554..4159270) 1 NC_016627.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 4159270 11563938 Clocl_3525 Clostridium clariflavum DSM 19732 thiamine monophosphate synthase YP_005047928.1 4158554 R 720554 CDS YP_005047929.1 374297738 11563939 complement(4159406..4160242) 1 NC_016627.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase, sugar kinase family 4160242 11563939 Clocl_3526 Clostridium clariflavum DSM 19732 hydroxyethylthiazole kinase, sugar kinase family YP_005047929.1 4159406 R 720554 CDS YP_005047930.1 374297739 11563940 complement(4160681..4161298) 1 NC_016627.1 manually curated; hypothetical protein 4161298 11563940 Clocl_3527 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047930.1 4160681 R 720554 CDS YP_005047931.1 374297740 11563941 complement(4161554..4162399) 1 NC_016627.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; spermidine synthase 4162399 11563941 Clocl_3528 Clostridium clariflavum DSM 19732 spermidine synthase YP_005047931.1 4161554 R 720554 CDS YP_005047932.1 374297741 11563943 complement(4164884..4165417) 1 NC_016627.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; 2'-5' RNA ligase 4165417 11563943 Clocl_3530 Clostridium clariflavum DSM 19732 2'-5' RNA ligase YP_005047932.1 4164884 R 720554 CDS YP_005047933.1 374297742 11563944 complement(4165487..4166551) 1 NC_016627.1 hypothetical protein 4166551 11563944 Clocl_3531 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047933.1 4165487 R 720554 CDS YP_005047934.1 374297743 11563946 4167484..4167876 1 NC_016627.1 PFAM: Penicillinase repressor; putative transcriptional regulator 4167876 11563946 Clocl_3533 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005047934.1 4167484 D 720554 CDS YP_005047935.1 374297744 11563947 4167873..4169480 1 NC_016627.1 PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein 4169480 11563947 Clocl_3534 Clostridium clariflavum DSM 19732 antirepressor regulating drug resistance protein YP_005047935.1 4167873 D 720554 CDS YP_005047936.1 374297745 11563948 complement(4169504..4172044) 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 4172044 11563948 Clocl_3535 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005047936.1 4169504 R 720554 CDS YP_005047937.1 374297746 11563949 complement(4172041..4172718) 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 4172718 11563949 Clocl_3536 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005047937.1 4172041 R 720554 CDS YP_005047938.1 374297747 11563950 complement(4172828..4173745) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 4173745 11563950 Clocl_3537 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005047938.1 4172828 R 720554 CDS YP_005047939.1 374297748 11563951 complement(4173747..4174457) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 4174457 11563951 Clocl_3538 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005047939.1 4173747 R 720554 CDS YP_005047940.1 374297749 11563952 complement(4174788..4175285) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, N-acetylglutamate synthase 4175285 11563952 Clocl_3539 Clostridium clariflavum DSM 19732 acetyltransferase, N-acetylglutamate synthase YP_005047940.1 4174788 R 720554 CDS YP_005047941.1 374297750 11563954 complement(4176767..4177741) 1 NC_016627.1 PFAM: Radical SAM superfamily; radical SAM superfamily enzyme 4177741 11563954 Clocl_3541 Clostridium clariflavum DSM 19732 radical SAM superfamily enzyme YP_005047941.1 4176767 R 720554 CDS YP_005047942.1 374297751 11563955 complement(4177744..4179525) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 4179525 11563955 Clocl_3542 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005047942.1 4177744 R 720554 CDS YP_005047943.1 374297752 11563956 complement(4179601..4179747) 1 NC_016627.1 hypothetical protein 4179747 11563956 Clocl_3543 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047943.1 4179601 R 720554 CDS YP_005047944.1 374297753 11563957 complement(4180289..4180711) 1 NC_016627.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; DNA-directed RNA polymerase specialized sigma subunit 4180711 11563957 Clocl_3544 Clostridium clariflavum DSM 19732 DNA-directed RNA polymerase specialized sigma subunit YP_005047944.1 4180289 R 720554 CDS YP_005047945.1 374297754 11563958 4181271..4181597 1 NC_016627.1 PFAM: Helix-turn-helix; Helix-turn-helix protein 4181597 11563958 Clocl_3545 Clostridium clariflavum DSM 19732 Helix-turn-helix protein YP_005047945.1 4181271 D 720554 CDS YP_005047946.1 374297755 11563959 complement(4181984..4182118) 1 NC_016627.1 hypothetical protein 4182118 11563959 Clocl_3547 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047946.1 4181984 R 720554 CDS YP_005047947.1 374297756 11563960 complement(4182120..4182752) 1 NC_016627.1 PFAM: Accessory gene regulator B; protein possibly involved in post-translational modification of quorum-sensing peptides 4182752 11563960 Clocl_3548 Clostridium clariflavum DSM 19732 protein possibly involved in post-translational modification of quorum-sensing peptides YP_005047947.1 4182120 R 720554 CDS YP_005047948.1 374297757 11563961 4183335..4184141 1 NC_016627.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 4184141 11563961 Clocl_3549 Clostridium clariflavum DSM 19732 prolipoprotein diacylglyceryl transferase YP_005047948.1 4183335 D 720554 CDS YP_005047949.1 374297758 11563962 4184293..4185564 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4185564 11563962 Clocl_3550 Clostridium clariflavum DSM 19732 transposase YP_005047949.1 4184293 D 720554 CDS YP_005047950.1 374297759 11563964 4186984..4187565 1 NC_016627.1 PFAM: Chromate transporter; chromate transport protein ChrA 4187565 11563964 Clocl_3552 Clostridium clariflavum DSM 19732 chromate transport protein ChrA YP_005047950.1 4186984 D 720554 CDS YP_005047951.1 374297760 11563965 4187562..4188125 1 NC_016627.1 PFAM: Chromate transporter; chromate transport protein ChrA 4188125 11563965 Clocl_3553 Clostridium clariflavum DSM 19732 chromate transport protein ChrA YP_005047951.1 4187562 D 720554 CDS YP_005047952.1 374297761 11563966 4188285..4188671 1 NC_016627.1 hypothetical protein 4188671 11563966 Clocl_3554 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047952.1 4188285 D 720554 CDS YP_005047953.1 374297762 11563967 complement(4189123..4189857) 1 NC_016627.1 PFAM: ABC-2 type transporter; hypothetical protein 4189857 11563967 Clocl_3555 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047953.1 4189123 R 720554 CDS YP_005047954.1 374297763 11563968 complement(4189859..4190824) 1 NC_016627.1 PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit; daunorubicin resistance ABC transporter ATP-binding subunit 4190824 11563968 Clocl_3556 Clostridium clariflavum DSM 19732 daunorubicin resistance ABC transporter ATP-binding subunit YP_005047954.1 4189859 R 720554 CDS YP_005047955.1 374297764 11563969 complement(4190910..4191734) 1 NC_016627.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); Dinitrogenase iron-molybdenum cofactor; TIGRFAM: C_GCAxxG_C_C family probable redox protein; hypothetical protein 4191734 11563969 Clocl_3557 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047955.1 4190910 R 720554 CDS YP_005047956.1 374297765 11563970 complement(4191731..4192579) 1 NC_016627.1 PFAM: ParA/MinD ATPase like; chromosome partitioning ATPase 4192579 11563970 Clocl_3558 Clostridium clariflavum DSM 19732 chromosome partitioning ATPase YP_005047956.1 4191731 R 720554 CDS YP_005047957.1 374297766 11563971 complement(4192598..4193422) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase, beta-lactamase superfamily II 4193422 11563971 Clocl_3559 Clostridium clariflavum DSM 19732 metal-dependent hydrolase, beta-lactamase superfamily II YP_005047957.1 4192598 R 720554 CDS YP_005047958.1 374297767 11563972 complement(4193419..4194303) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily 4194303 11563972 Clocl_3560 Clostridium clariflavum DSM 19732 P-loop ATPase, MinD superfamily YP_005047958.1 4193419 R 720554 CDS YP_005047959.1 374297768 11563973 complement(4194281..4195141) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; P-loop ATPase, MinD superfamily 4195141 11563973 Clocl_3561 Clostridium clariflavum DSM 19732 P-loop ATPase, MinD superfamily YP_005047959.1 4194281 R 720554 CDS YP_005047960.1 374297769 11563974 complement(4195143..4195511) 1 NC_016627.1 PFAM: Dinitrogenase iron-molybdenum cofactor; hypothetical protein 4195511 11563974 Clocl_3562 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047960.1 4195143 R 720554 CDS YP_005047961.1 374297770 11563975 complement(4195486..4196655) 1 NC_016627.1 hypothetical protein 4196655 11563975 Clocl_3563 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047961.1 4195486 R 720554 CDS YP_005047962.1 374297771 11563976 complement(4196657..4197202) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1393); manually curated; hypothetical protein 4197202 11563976 Clocl_3564 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047962.1 4196657 R 720554 CDS YP_005047963.1 374297772 11563977 complement(4197190..4197567) 1 NC_016627.1 PFAM: NifU-like N terminal domain; iron-sulfur cluster biosynthesis protein, NifU-like protein 4197567 11563977 Clocl_3565 Clostridium clariflavum DSM 19732 iron-sulfur cluster biosynthesis protein, NifU-like protein YP_005047963.1 4197190 R 720554 CDS YP_005047964.1 374297773 11563978 complement(4197570..4197944) 1 NC_016627.1 PFAM: Protein of unknown function DUF134; putative DNA-binding protein 4197944 11563978 Clocl_3566 Clostridium clariflavum DSM 19732 putative DNA-binding protein YP_005047964.1 4197570 R 720554 CDS YP_005047965.1 374297774 11563979 complement(4198010..4198288) 1 NC_016627.1 hypothetical protein 4198288 11563979 Clocl_3567 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047965.1 4198010 R 720554 CDS YP_005047966.1 374297775 11563980 complement(4198706..4200064) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; histidine kinase 4200064 11563980 Clocl_3568 Clostridium clariflavum DSM 19732 histidine kinase YP_005047966.1 4198706 R 720554 CDS YP_005047967.1 374297776 11563981 complement(4200077..4200817) 1 NC_016627.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; response regulator of the LytR/AlgR family 4200817 11563981 Clocl_3569 Clostridium clariflavum DSM 19732 response regulator of the LytR/AlgR family YP_005047967.1 4200077 R 720554 CDS YP_005047968.1 374297777 11563983 complement(4201439..4201627) 1 NC_016627.1 PFAM: Predicted RNA-binding protein; putative RNA-binding protein 4201627 11563983 Clocl_3572 Clostridium clariflavum DSM 19732 putative RNA-binding protein YP_005047968.1 4201439 R 720554 CDS YP_005047969.1 374297778 11563984 complement(4201629..4202048) 1 NC_016627.1 hypothetical protein 4202048 11563984 Clocl_3573 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047969.1 4201629 R 720554 CDS YP_005047970.1 374297779 11563985 complement(4202111..4202980) 1 NC_016627.1 PFAM: Amidohydrolase; putative TIM-barrel fold metal-dependent hydrolase 4202980 11563985 Clocl_3574 Clostridium clariflavum DSM 19732 putative TIM-barrel fold metal-dependent hydrolase YP_005047970.1 4202111 R 720554 CDS YP_005047971.1 374297780 11563987 complement(4203775..4204779) 1 NC_016627.1 PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 4204779 11563987 Clocl_3576 Clostridium clariflavum DSM 19732 Fe3+-siderophore ABC transporter permease YP_005047971.1 4203775 R 720554 CDS YP_005047972.1 374297781 11563988 complement(4204817..4205833) 1 NC_016627.1 PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein 4205833 11563988 Clocl_3577 Clostridium clariflavum DSM 19732 Fe3+-hydroxamate ABC transporter periplasmic protein YP_005047972.1 4204817 R 720554 CDS YP_005047973.1 374297782 11563989 complement(4206099..4206728) 1 NC_016627.1 PFAM: Precorrin-8X methylmutase; precorrin isomerase 4206728 11563989 Clocl_3578 Clostridium clariflavum DSM 19732 precorrin isomerase YP_005047973.1 4206099 R 720554 CDS YP_005047974.1 374297783 11563990 complement(4206728..4207252) 1 NC_016627.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase; ATP:corrinoid adenosyltransferase 4207252 11563990 Clocl_3579 Clostridium clariflavum DSM 19732 ATP:corrinoid adenosyltransferase YP_005047974.1 4206728 R 720554 CDS YP_005047975.1 374297784 11563991 complement(4207249..4208751) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ; adenosylcobyric acid synthase 4208751 11563991 Clocl_3580 Clostridium clariflavum DSM 19732 adenosylcobyric acid synthase YP_005047975.1 4207249 R 720554 CDS YP_005047976.1 374297785 11563992 complement(4208744..4209808) 1 NC_016627.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase; L-threonine-O-3-phosphate decarboxylase 4209808 11563992 Clocl_3581 Clostridium clariflavum DSM 19732 L-threonine-O-3-phosphate decarboxylase YP_005047976.1 4208744 R 720554 CDS YP_005047977.1 374297786 11563993 complement(4209796..4210749) 1 NC_016627.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 4210749 11563993 Clocl_3582 Clostridium clariflavum DSM 19732 cobalamin biosynthesis protein CobD YP_005047977.1 4209796 R 720554 CDS YP_005047978.1 374297787 11563994 complement(4210746..4212089) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing), cobyrinate a,c-diamide synthase 4212089 11563994 Clocl_3583 Clostridium clariflavum DSM 19732 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing), cobyrinate a,c-diamide synthase YP_005047978.1 4210746 R 720554 CDS YP_005047979.1 374297788 11563995 complement(4212079..4213278) 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Putative methyltransferase; TIGRFAM: methyltransferase, FkbM family; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 4213278 11563995 Clocl_3584 Clostridium clariflavum DSM 19732 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit YP_005047979.1 4212079 R 720554 CDS YP_005047980.1 374297789 11563996 complement(4213275..4213637) 1 NC_016627.1 PFAM: CbiX; hypothetical protein 4213637 11563996 Clocl_3585 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047980.1 4213275 R 720554 CDS YP_005047981.1 374297790 11563997 complement(4213634..4214932) 1 NC_016627.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 4214932 11563997 Clocl_3586 Clostridium clariflavum DSM 19732 glutamate-1-semialdehyde-2,1-aminomutase YP_005047981.1 4213634 R 720554 CDS YP_005047982.1 374297791 11563998 complement(4214929..4215909) 1 NC_016627.1 PFAM: Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 4215909 11563998 Clocl_3587 Clostridium clariflavum DSM 19732 delta-aminolevulinic acid dehydratase YP_005047982.1 4214929 R 720554 CDS YP_005047983.1 374297792 11563999 complement(4215875..4217404) 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 4217404 11563999 Clocl_3588 Clostridium clariflavum DSM 19732 uroporphyrin-III C-methyltransferase YP_005047983.1 4215875 R 720554 CDS YP_005047984.1 374297793 11564000 complement(4217409..4218281) 1 NC_016627.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; hydroxymethylbilane synthase 4218281 11564000 Clocl_3589 Clostridium clariflavum DSM 19732 hydroxymethylbilane synthase YP_005047984.1 4217409 R 720554 CDS YP_005047985.1 374297794 11564001 complement(4218278..4219507) 1 NC_016627.1 PFAM: Precorrin-6x reductase CbiJ/CobK; TIGRFAM: precorrin-6x reductase; siroheme synthase, N-terminal domain; precorrin-6x reductase 4219507 11564001 Clocl_3590 Clostridium clariflavum DSM 19732 precorrin-6x reductase YP_005047985.1 4218278 R 720554 CDS YP_005047986.1 374297795 11564002 complement(4219537..4220262) 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 4220262 11564002 Clocl_3591 Clostridium clariflavum DSM 19732 precorrin-3B C(17)-methyltransferase YP_005047986.1 4219537 R 720554 CDS YP_005047987.1 374297796 11564003 complement(4220289..4221293) 1 NC_016627.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase 4221293 11564003 Clocl_3592 Clostridium clariflavum DSM 19732 glutamyl-tRNA reductase YP_005047987.1 4220289 R 720554 CDS YP_005047988.1 374297797 11564004 complement(4221290..4222327) 1 NC_016627.1 PFAM: Cobalamin synthesis G C-terminus; Cobalamin biosynthesis central region; Cobalamin synthesis G N-terminal; cobalamin biosynthesis protein CbiG 4222327 11564004 Clocl_3593 Clostridium clariflavum DSM 19732 cobalamin biosynthesis protein CbiG YP_005047988.1 4221290 R 720554 CDS YP_005047989.1 374297798 11564005 complement(4222324..4223082) 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-4 C11-methyltransferase; cobalt-precorrin 4 C11-methyltransferase 4223082 11564005 Clocl_3594 Clostridium clariflavum DSM 19732 cobalt-precorrin 4 C11-methyltransferase YP_005047989.1 4222324 R 720554 CDS YP_005047990.1 374297799 11564006 complement(4223085..4223765) 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 4223765 11564006 Clocl_3595 Clostridium clariflavum DSM 19732 precorrin-2 C(20)-methyltransferase YP_005047990.1 4223085 R 720554 CDS YP_005047991.1 374297800 11564007 complement(4223762..4224895) 1 NC_016627.1 PFAM: CbiD; TIGRFAM: cobalamin biosynthesis protein CbiD; cobalt-precorrin 5B C1-methyltransferase 4224895 11564007 Clocl_3596 Clostridium clariflavum DSM 19732 cobalt-precorrin 5B C1-methyltransferase YP_005047991.1 4223762 R 720554 CDS YP_005047992.1 374297801 11564008 complement(4225047..4225901) 1 NC_016627.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit; cobalt transport protein ATP-binding subunit 4225901 11564008 Clocl_3597 Clostridium clariflavum DSM 19732 cobalt transport protein ATP-binding subunit YP_005047992.1 4225047 R 720554 CDS YP_005047993.1 374297802 11564009 complement(4225914..4226690) 1 NC_016627.1 PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; cobalt ABC transporter permease CbiQ 4226690 11564009 Clocl_3598 Clostridium clariflavum DSM 19732 cobalt ABC transporter permease CbiQ YP_005047993.1 4225914 R 720554 CDS YP_005047994.1 374297803 11564010 complement(4226687..4227013) 1 NC_016627.1 PFAM: Cobalt transport protein component CbiN; TIGRFAM: cobalt transport protein; cobalt transport protein 4227013 11564010 Clocl_3599 Clostridium clariflavum DSM 19732 cobalt transport protein YP_005047994.1 4226687 R 720554 CDS YP_005047995.1 374297804 11564011 complement(4227016..4227756) 1 NC_016627.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; cobalamin biosynthesis protein CbiM 4227756 11564011 Clocl_3600 Clostridium clariflavum DSM 19732 cobalamin biosynthesis protein CbiM YP_005047995.1 4227016 R 720554 CDS YP_005047996.1 374297805 11564012 complement(4228230..4228589) 1 NC_016627.1 PFAM: HNH endonuclease; restriction endonuclease 4228589 11564012 Clocl_3601 Clostridium clariflavum DSM 19732 restriction endonuclease YP_005047996.1 4228230 R 720554 CDS YP_005047997.1 374297806 11564013 complement(4228723..4228953) 1 NC_016627.1 hypothetical protein 4228953 11564013 Clocl_3602 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047997.1 4228723 R 720554 CDS YP_005047998.1 374297807 11564014 complement(4229096..4230094) 1 NC_016627.1 TIGRFAM: putative zinc finger/helix-turn-helix protein, YgiT family; putative zinc finger/helix-turn-helix protein, YgiT family 4230094 11564014 Clocl_3603 Clostridium clariflavum DSM 19732 putative zinc finger/helix-turn-helix protein, YgiT family YP_005047998.1 4229096 R 720554 CDS YP_005047999.1 374297808 11564015 complement(4230134..4230544) 1 NC_016627.1 hypothetical protein 4230544 11564015 Clocl_3604 Clostridium clariflavum DSM 19732 hypothetical protein YP_005047999.1 4230134 R 720554 CDS YP_005048000.1 374297809 11564016 complement(4230783..4231238) 1 NC_016627.1 hypothetical protein 4231238 11564016 Clocl_3605 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048000.1 4230783 R 720554 CDS YP_005048001.1 374297810 11564017 complement(4231346..4231633) 1 NC_016627.1 PFAM: VRR-NUC domain; VRR-NUC domain-containing protein 4231633 11564017 Clocl_3606 Clostridium clariflavum DSM 19732 VRR-NUC domain-containing protein YP_005048001.1 4231346 R 720554 CDS YP_005048002.1 374297811 11564018 complement(4231933..4234488) 1 NC_016627.1 PFAM: Bifunctional DNA primase/polymerase, N-terminal; bifunctional DNA primase/polymerase famiily protein 4234488 11564018 Clocl_3607 Clostridium clariflavum DSM 19732 bifunctional DNA primase/polymerase famiily protein YP_005048002.1 4231933 R 720554 CDS YP_005048003.1 374297812 11564019 4235164..4235886 1 NC_016627.1 hypothetical protein 4235886 11564019 Clocl_3608 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048003.1 4235164 D 720554 CDS YP_005048004.1 374297813 11564020 complement(4236032..4236469) 1 NC_016627.1 hypothetical protein 4236469 11564020 Clocl_3609 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048004.1 4236032 R 720554 CDS YP_005048005.1 374297814 11564021 complement(4236527..4237006) 1 NC_016627.1 hypothetical protein 4237006 11564021 Clocl_3610 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048005.1 4236527 R 720554 CDS YP_005048006.1 374297815 11564022 complement(4237394..4237696) 1 NC_016627.1 hypothetical protein 4237696 11564022 Clocl_3611 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048006.1 4237394 R 720554 CDS YP_005048007.1 374297816 11564023 complement(4237927..4238622) 1 NC_016627.1 hypothetical protein 4238622 11564023 Clocl_3612 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048007.1 4237927 R 720554 CDS YP_005048008.1 374297817 11564024 complement(4238612..4239154) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 4239154 11564024 Clocl_3613 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005048008.1 4238612 R 720554 CDS YP_005048009.1 374297818 11564026 complement(4239655..4240953) 1 NC_016627.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 4240953 11564026 Clocl_3615 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005048009.1 4239655 R 720554 CDS YP_005048010.1 374297819 11564027 complement(4241674..4242318) 1 NC_016627.1 PFAM: Plasmid pRiA4b ORF-3-like protein; Plasmid pRiA4b ORF-3-like protein 4242318 11564027 Clocl_3616 Clostridium clariflavum DSM 19732 Plasmid pRiA4b ORF-3-like protein YP_005048010.1 4241674 R 720554 CDS YP_005048011.1 374297820 11564028 complement(4242324..4242896) 1 NC_016627.1 hypothetical protein 4242896 11564028 Clocl_3617 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048011.1 4242324 R 720554 CDS YP_005048012.1 374297821 11564030 complement(4243402..4244088) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 4244088 11564030 Clocl_3619 Clostridium clariflavum DSM 19732 DNA replication protein YP_005048012.1 4243402 R 720554 CDS YP_005048013.1 374297822 11564031 complement(4244081..4245553) 1 NC_016627.1 PFAM: Integrase core domain; transposase 4245553 11564031 Clocl_3620 Clostridium clariflavum DSM 19732 transposase YP_005048013.1 4244081 R 720554 CDS YP_005048014.1 374297823 11564032 complement(4245717..4246808) 1 NC_016627.1 hypothetical protein 4246808 11564032 Clocl_3621 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048014.1 4245717 R 720554 CDS YP_005048015.1 374297824 11564033 complement(4246871..4250068) 1 NC_016627.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3387); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; HsdR family type I site-specific deoxyribonuclease 4250068 11564033 Clocl_3622 Clostridium clariflavum DSM 19732 HsdR family type I site-specific deoxyribonuclease YP_005048015.1 4246871 R 720554 CDS YP_005048016.1 374297825 11564034 complement(4250098..4251333) 1 NC_016627.1 PFAM: Type I restriction modification DNA specificity domain; restriction endonuclease S subunit 4251333 11564034 Clocl_3623 Clostridium clariflavum DSM 19732 restriction endonuclease S subunit YP_005048016.1 4250098 R 720554 CDS YP_005048017.1 374297826 11564035 complement(4251330..4252358) 1 NC_016627.1 virulence protein 4252358 11564035 Clocl_3624 Clostridium clariflavum DSM 19732 virulence protein YP_005048017.1 4251330 R 720554 CDS YP_005048018.1 374297827 11564036 complement(4252348..4253850) 1 NC_016627.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM); type I restriction-modification system methyltransferase subunit 4253850 11564036 Clocl_3625 Clostridium clariflavum DSM 19732 type I restriction-modification system methyltransferase subunit YP_005048018.1 4252348 R 720554 CDS YP_005048019.1 374297828 11564037 complement(4253870..4254370) 1 NC_016627.1 hypothetical protein 4254370 11564037 Clocl_3626 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048019.1 4253870 R 720554 CDS YP_005048020.1 374297829 11564038 complement(4254384..4255967) 1 NC_016627.1 PFAM: N-6 DNA Methylase; Type I restriction modification DNA specificity domain; restriction endonuclease S subunit 4255967 11564038 Clocl_3627 Clostridium clariflavum DSM 19732 restriction endonuclease S subunit YP_005048020.1 4254384 R 720554 CDS YP_005048021.1 374297830 11564039 complement(4256315..4256440) 1 NC_016627.1 hypothetical protein 4256440 11564039 Clocl_3628 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048021.1 4256315 R 720554 CDS YP_005048022.1 374297831 11564041 complement(4257566..4258627) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 4258627 11564041 Clocl_3630 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005048022.1 4257566 R 720554 CDS YP_005048023.1 374297832 11564042 complement(4258674..4259372) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 4259372 11564042 Clocl_3631 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005048023.1 4258674 R 720554 CDS YP_005048024.1 374297833 11564043 complement(4259391..4259633) 1 NC_016627.1 hypothetical protein 4259633 11564043 Clocl_3632 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048024.1 4259391 R 720554 CDS YP_005048025.1 374297834 11564045 complement(4259938..4260486) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase, ribosomal protein N-acetylase 4260486 11564045 Clocl_3634 Clostridium clariflavum DSM 19732 acetyltransferase, ribosomal protein N-acetylase YP_005048025.1 4259938 R 720554 CDS YP_005048026.1 374297835 11564046 complement(4260504..4261121) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 4261121 11564046 Clocl_3635 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005048026.1 4260504 R 720554 CDS YP_005048027.1 374297836 11564048 complement(4262339..4263025) 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 4263025 11564048 Clocl_3637 Clostridium clariflavum DSM 19732 DNA replication protein YP_005048027.1 4262339 R 720554 CDS YP_005048028.1 374297837 11564049 complement(4263018..4264490) 1 NC_016627.1 PFAM: Integrase core domain; transposase 4264490 11564049 Clocl_3638 Clostridium clariflavum DSM 19732 transposase YP_005048028.1 4263018 R 720554 CDS YP_005048029.1 374297838 11564050 complement(4264782..4268030) 1 NC_016627.1 PFAM: Type III restriction enzyme, res subunit; hypothetical protein 4268030 11564050 Clocl_3639 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048029.1 4264782 R 720554 CDS YP_005048030.1 374297839 11564051 complement(4268030..4270933) 1 NC_016627.1 PFAM: DNA methylase; adenine specific DNA methylase Mod 4270933 11564051 Clocl_3640 Clostridium clariflavum DSM 19732 adenine specific DNA methylase Mod YP_005048030.1 4268030 R 720554 CDS YP_005048031.1 374297840 11564052 complement(4270949..4273792) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; DNA/RNA helicase 4273792 11564052 Clocl_3641 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005048031.1 4270949 R 720554 CDS YP_005048032.1 374297841 11564053 complement(4273820..4274029) 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 4274029 11564053 Clocl_3642 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048032.1 4273820 R 720554 CDS YP_005048033.1 374297842 11564057 complement(4277839..4278582) 1 NC_016627.1 PFAM: Integrase core domain; transposase 4278582 11564057 Clocl_3646 Clostridium clariflavum DSM 19732 transposase YP_005048033.1 4277839 R 720554 CDS YP_005048034.1 374297843 11564058 complement(4278741..4279049) 1 NC_016627.1 PFAM: Transposase; transposase 4279049 11564058 Clocl_3647 Clostridium clariflavum DSM 19732 transposase YP_005048034.1 4278741 R 720554 CDS YP_005048035.1 374297844 11564060 complement(4279507..4280805) 1 NC_016627.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; Retron-type reverse transcriptase 4280805 11564060 Clocl_3649 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005048035.1 4279507 R 720554 CDS YP_005048036.1 374297845 11564062 complement(4281408..4282706) 1 NC_016627.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 4282706 11564062 Clocl_3651 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005048036.1 4281408 R 720554 CDS YP_005048037.1 374297846 11564063 complement(4283405..4284328) 1 NC_016627.1 hypothetical protein 4284328 11564063 Clocl_3652 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048037.1 4283405 R 720554 CDS YP_005048038.1 374297847 11564064 complement(4284325..4284810) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 4284810 11564064 Clocl_3653 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005048038.1 4284325 R 720554 CDS YP_005048039.1 374297848 11564065 complement(4285191..4287812) 1 NC_016627.1 PFAM: BlaR1 peptidase M56; antirepressor regulating drug resistance protein 4287812 11564065 Clocl_3654 Clostridium clariflavum DSM 19732 antirepressor regulating drug resistance protein YP_005048039.1 4285191 R 720554 CDS YP_005048040.1 374297849 11564066 complement(4287815..4288177) 1 NC_016627.1 PFAM: Penicillinase repressor; putative transcriptional regulator 4288177 11564066 Clocl_3655 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048040.1 4287815 R 720554 CDS YP_005048041.1 374297850 11564067 complement(4288360..4289928) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 4289928 11564067 Clocl_3656 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005048041.1 4288360 R 720554 CDS YP_005048042.1 374297851 11564068 complement(4289891..4290382) 1 NC_016627.1 hypothetical protein 4290382 11564068 Clocl_3657 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048042.1 4289891 R 720554 CDS YP_005048043.1 374297852 11564069 complement(4290346..4291914) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 4291914 11564069 Clocl_3658 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005048043.1 4290346 R 720554 CDS YP_005048044.1 374297853 11564070 complement(4291976..4292194) 1 NC_016627.1 hypothetical protein 4292194 11564070 Clocl_3659 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048044.1 4291976 R 720554 CDS YP_005048045.1 374297854 11564071 complement(4292248..4293252) 1 NC_016627.1 PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain; LysM domain-containing protein 4293252 11564071 Clocl_3660 Clostridium clariflavum DSM 19732 LysM domain-containing protein YP_005048045.1 4292248 R 720554 CDS YP_005048046.1 374297855 11564072 complement(4293249..4293668) 1 NC_016627.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin; toxin secretion/phage lysis holin 4293668 11564072 Clocl_3661 Clostridium clariflavum DSM 19732 toxin secretion/phage lysis holin YP_005048046.1 4293249 R 720554 CDS YP_005048047.1 374297856 11564073 complement(4293755..4296223) 1 NC_016627.1 PFAM: Glycosyl hydrolases family 18; putative glycosyl hydrolase 4296223 11564073 Clocl_3662 Clostridium clariflavum DSM 19732 putative glycosyl hydrolase YP_005048047.1 4293755 R 720554 CDS YP_005048048.1 374297857 11564074 complement(4296220..4296804) 1 NC_016627.1 hypothetical protein 4296804 11564074 Clocl_3663 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048048.1 4296220 R 720554 CDS YP_005048049.1 374297858 11564076 complement(4297219..4297413) 1 NC_016627.1 hypothetical protein 4297413 11564076 Clocl_3665 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048049.1 4297219 R 720554 CDS YP_005048050.1 374297859 11564077 complement(4297424..4298704) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region; phage minor structural protein 4298704 11564077 Clocl_3666 Clostridium clariflavum DSM 19732 phage minor structural protein YP_005048050.1 4297424 R 720554 CDS YP_005048051.1 374297860 11564078 complement(4298756..4299946) 1 NC_016627.1 hypothetical protein 4299946 11564078 Clocl_3667 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048051.1 4298756 R 720554 CDS YP_005048052.1 374297861 11564079 complement(4300059..4300832) 1 NC_016627.1 PFAM: Phage tail protein; TIGRFAM: putative phage tail component, N-terminal domain; phage putative tail component 4300832 11564079 Clocl_3668 Clostridium clariflavum DSM 19732 phage putative tail component YP_005048052.1 4300059 R 720554 CDS YP_005048053.1 374297862 11564080 complement(4300846..4303032) 1 NC_016627.1 hypothetical protein 4303032 11564080 Clocl_3669 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048053.1 4300846 R 720554 CDS YP_005048054.1 374297863 11564081 complement(4303059..4303250) 1 NC_016627.1 hypothetical protein 4303250 11564081 Clocl_3670 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048054.1 4303059 R 720554 CDS YP_005048055.1 374297864 11564082 complement(4303247..4303630) 1 NC_016627.1 hypothetical protein 4303630 11564082 Clocl_3671 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048055.1 4303247 R 720554 CDS YP_005048056.1 374297865 11564084 complement(4304293..4304523) 1 NC_016627.1 hypothetical protein 4304523 11564084 Clocl_3673 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048056.1 4304293 R 720554 CDS YP_005048057.1 374297866 11564085 4304825..4305742 1 NC_016627.1 PFAM: Abi-like protein; abortive infection bacteriophage resistance protein 4305742 11564085 Clocl_3674 Clostridium clariflavum DSM 19732 abortive infection bacteriophage resistance protein YP_005048057.1 4304825 D 720554 CDS YP_005048058.1 374297867 11564086 complement(4305894..4306349) 1 NC_016627.1 hypothetical protein 4306349 11564086 Clocl_3675 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048058.1 4305894 R 720554 CDS YP_005048059.1 374297868 11564087 complement(4306441..4306743) 1 NC_016627.1 PFAM: VRR-NUC domain; Holliday junction resolvase 4306743 11564087 Clocl_3676 Clostridium clariflavum DSM 19732 Holliday junction resolvase YP_005048059.1 4306441 R 720554 CDS YP_005048060.1 374297869 11564088 complement(4307045..4308580) 1 NC_016627.1 PFAM: HTH domain; putative transcriptional regulator 4308580 11564088 Clocl_3677 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048060.1 4307045 R 720554 CDS YP_005048061.1 374297870 11564089 4309199..4309876 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 4309876 11564089 Clocl_3678 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005048061.1 4309199 D 720554 CDS YP_005048062.1 374297871 11564090 4309873..4312392 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 4312392 11564090 Clocl_3679 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005048062.1 4309873 D 720554 CDS YP_005048063.1 374297872 11564091 complement(4312405..4313412) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 4313412 11564091 Clocl_3680 Clostridium clariflavum DSM 19732 histidine kinase YP_005048063.1 4312405 R 720554 CDS YP_005048064.1 374297873 11564092 complement(4313412..4314086) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 4314086 11564092 Clocl_3681 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005048064.1 4313412 R 720554 CDS YP_005048065.1 374297874 11564093 complement(4314504..4315280) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 4315280 11564093 Clocl_3682 Clostridium clariflavum DSM 19732 Zn-dependent hydrolase YP_005048065.1 4314504 R 720554 CDS YP_005048066.1 374297875 11564096 complement(4317444..4317980) 1 NC_016627.1 hypothetical protein 4317980 11564096 Clocl_3685 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048066.1 4317444 R 720554 CDS YP_005048067.1 374297876 11564098 4318301..4318552 1 NC_016627.1 PFAM: Transposase; transposase 4318552 11564098 Clocl_3687 Clostridium clariflavum DSM 19732 transposase YP_005048067.1 4318301 D 720554 CDS YP_005048068.1 374297877 11564099 complement(4318767..4319417) 1 NC_016627.1 hypothetical protein 4319417 11564099 Clocl_3688 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048068.1 4318767 R 720554 CDS YP_005048069.1 374297878 11564100 complement(4319944..4320963) 1 NC_016627.1 PFAM: Transposase DDE domain; transposase 4320963 11564100 Clocl_3689 Clostridium clariflavum DSM 19732 transposase YP_005048069.1 4319944 R 720554 CDS YP_005048070.1 374297879 11564102 complement(4321435..4322733) 1 NC_016627.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 4322733 11564102 Clocl_3691 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005048070.1 4321435 R 720554 CDS YP_005048071.1 374297880 11564103 complement(4323370..4323855) 1 NC_016627.1 PFAM: BFD-like [2Fe-2S] binding domain; BFD-like (2Fe-2S) protein 4323855 11564103 Clocl_3692 Clostridium clariflavum DSM 19732 BFD-like (2Fe-2S) protein YP_005048071.1 4323370 R 720554 CDS YP_005048072.1 374297881 11564104 complement(4324013..4324477) 1 NC_016627.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 4324477 11564104 Clocl_3693 Clostridium clariflavum DSM 19732 lipoprotein signal peptidase YP_005048072.1 4324013 R 720554 CDS YP_005048073.1 374297882 11564105 complement(4324564..4326924) 1 NC_016627.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal-translocating P-type ATPase 4326924 11564105 Clocl_3694 Clostridium clariflavum DSM 19732 heavy metal-translocating P-type ATPase YP_005048073.1 4324564 R 720554 CDS YP_005048074.1 374297883 11564106 complement(4326938..4327312) 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 4327312 11564106 Clocl_3695 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048074.1 4326938 R 720554 CDS YP_005048075.1 374297884 11564108 complement(4327812..4329380) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 4329380 11564108 Clocl_3697 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005048075.1 4327812 R 720554 CDS YP_005048076.1 374297885 11564109 complement(4329343..4329834) 1 NC_016627.1 hypothetical protein 4329834 11564109 Clocl_3698 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048076.1 4329343 R 720554 CDS YP_005048077.1 374297886 11564110 complement(4329798..4331366) 1 NC_016627.1 PFAM: Recombinase; Resolvase, N terminal domain; site-specific recombinase, DNA invertase Pin 4331366 11564110 Clocl_3699 Clostridium clariflavum DSM 19732 site-specific recombinase, DNA invertase Pin YP_005048077.1 4329798 R 720554 CDS YP_005048078.1 374297887 11564111 complement(4331428..4331646) 1 NC_016627.1 hypothetical protein 4331646 11564111 Clocl_3700 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048078.1 4331428 R 720554 CDS YP_005048079.1 374297888 11564112 complement(4331700..4332704) 1 NC_016627.1 PFAM: N-acetylmuramoyl-L-alanine amidase; LysM domain; LysM domain-containing protein 4332704 11564112 Clocl_3701 Clostridium clariflavum DSM 19732 LysM domain-containing protein YP_005048079.1 4331700 R 720554 CDS YP_005048080.1 374297889 11564113 complement(4332701..4333120) 1 NC_016627.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin; holin, Cph1 family 4333120 11564113 Clocl_3702 Clostridium clariflavum DSM 19732 holin, Cph1 family YP_005048080.1 4332701 R 720554 CDS YP_005048081.1 374297890 11564114 complement(4333208..4335676) 1 NC_016627.1 PFAM: Glycosyl hydrolases family 18; putative glycosyl hydrolase 4335676 11564114 Clocl_3703 Clostridium clariflavum DSM 19732 putative glycosyl hydrolase YP_005048081.1 4333208 R 720554 CDS YP_005048082.1 374297891 11564115 complement(4335673..4336248) 1 NC_016627.1 hypothetical protein 4336248 11564115 Clocl_3704 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048082.1 4335673 R 720554 CDS YP_005048083.1 374297892 11564116 complement(4336258..4336452) 1 NC_016627.1 hypothetical protein 4336452 11564116 Clocl_3705 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048083.1 4336258 R 720554 CDS YP_005048084.1 374297893 11564117 complement(4336463..4338985) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region; phage minor structural protein 4338985 11564117 Clocl_3706 Clostridium clariflavum DSM 19732 phage minor structural protein YP_005048084.1 4336463 R 720554 CDS YP_005048085.1 374297894 11564118 complement(4338990..4339763) 1 NC_016627.1 PFAM: Phage tail protein; TIGRFAM: putative phage tail component, N-terminal domain; phage putative tail component 4339763 11564118 Clocl_3707 Clostridium clariflavum DSM 19732 phage putative tail component YP_005048085.1 4338990 R 720554 CDS YP_005048086.1 374297895 11564119 complement(4339777..4341963) 1 NC_016627.1 hypothetical protein 4341963 11564119 Clocl_3708 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048086.1 4339777 R 720554 CDS YP_005048087.1 374297896 11564120 complement(4341991..4342182) 1 NC_016627.1 hypothetical protein 4342182 11564120 Clocl_3709 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048087.1 4341991 R 720554 CDS YP_005048088.1 374297897 11564121 complement(4342179..4342562) 1 NC_016627.1 hypothetical protein 4342562 11564121 Clocl_3710 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048088.1 4342179 R 720554 CDS YP_005048089.1 374297898 11564122 complement(4342562..4343161) 1 NC_016627.1 TIGRFAM: phage major tail protein, phi13 family; phage major tail protein, phi13 family 4343161 11564122 Clocl_3711 Clostridium clariflavum DSM 19732 phage major tail protein, phi13 family YP_005048089.1 4342562 R 720554 CDS YP_005048090.1 374297899 11564123 complement(4343167..4343511) 1 NC_016627.1 hypothetical protein 4343511 11564123 Clocl_3712 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048090.1 4343167 R 720554 CDS YP_005048091.1 374297900 11564124 complement(4343508..4343939) 1 NC_016627.1 PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family; hypothetical protein 4343939 11564124 Clocl_3713 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048091.1 4343508 R 720554 CDS YP_005048092.1 374297901 11564125 complement(4343957..4344292) 1 NC_016627.1 PFAM: Phage head-tail joining protein; Phage head-tail joining protein 4344292 11564125 Clocl_3714 Clostridium clariflavum DSM 19732 Phage head-tail joining protein YP_005048092.1 4343957 R 720554 CDS YP_005048093.1 374297902 11564126 complement(4344400..4344708) 1 NC_016627.1 PFAM: Phage QLRG family, putative DNA packaging; Phage QLRG family, putative DNA packaging 4344708 11564126 Clocl_3715 Clostridium clariflavum DSM 19732 Phage QLRG family, putative DNA packaging YP_005048093.1 4344400 R 720554 CDS YP_005048094.1 374297903 11564127 complement(4344729..4345931) 1 NC_016627.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family; phage major capsid protein, HK97 family 4345931 11564127 Clocl_3716 Clostridium clariflavum DSM 19732 phage major capsid protein, HK97 family YP_005048094.1 4344729 R 720554 CDS YP_005048095.1 374297904 11564128 complement(4345982..4346710) 1 NC_016627.1 PFAM: Clp protease; protease subunit of ATP-dependent protease 4346710 11564128 Clocl_3717 Clostridium clariflavum DSM 19732 protease subunit of ATP-dependent protease YP_005048095.1 4345982 R 720554 CDS YP_005048096.1 374297905 11564129 complement(4346649..4347971) 1 NC_016627.1 PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family; phage portal protein, HK97 family 4347971 11564129 Clocl_3718 Clostridium clariflavum DSM 19732 phage portal protein, HK97 family YP_005048096.1 4346649 R 720554 CDS YP_005048097.1 374297906 11564130 complement(4347968..4349620) 1 NC_016627.1 PFAM: Phage Terminase; phage terminase-like protein, large subunit 4349620 11564130 Clocl_3719 Clostridium clariflavum DSM 19732 phage terminase-like protein, large subunit YP_005048097.1 4347968 R 720554 CDS YP_005048098.1 374297907 11564131 complement(4349675..4349869) 1 NC_016627.1 hypothetical protein 4349869 11564131 Clocl_3720 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048098.1 4349675 R 720554 CDS YP_005048099.1 374297908 11564132 complement(4349873..4350340) 1 NC_016627.1 PFAM: AIG2-like family; AIG2-like family protein 4350340 11564132 Clocl_3721 Clostridium clariflavum DSM 19732 AIG2-like family protein YP_005048099.1 4349873 R 720554 CDS YP_005048100.1 374297909 11564133 complement(4350402..4351301) 1 NC_016627.1 PFAM: Putative amidoligase enzyme; amidoligase enzyme 4351301 11564133 Clocl_3722 Clostridium clariflavum DSM 19732 amidoligase enzyme YP_005048100.1 4350402 R 720554 CDS YP_005048101.1 374297910 11564134 complement(4351443..4351673) 1 NC_016627.1 hypothetical protein 4351673 11564134 Clocl_3723 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048101.1 4351443 R 720554 CDS YP_005048102.1 374297911 11564135 complement(4351670..4352005) 1 NC_016627.1 hypothetical protein 4352005 11564135 Clocl_3724 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048102.1 4351670 R 720554 CDS YP_005048103.1 374297912 11564136 complement(4351998..4352690) 1 NC_016627.1 hypothetical protein 4352690 11564136 Clocl_3725 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048103.1 4351998 R 720554 CDS YP_005048104.1 374297913 11564137 complement(4352807..4354060) 1 NC_016627.1 PFAM: DNA methylase; ParB-like nuclease domain; DNA modification methylase 4354060 11564137 Clocl_3726 Clostridium clariflavum DSM 19732 DNA modification methylase YP_005048104.1 4352807 R 720554 CDS YP_005048105.1 374297914 11564138 complement(4354066..4355364) 1 NC_016627.1 PFAM: ParB-like nuclease domain; DNA methylase; DNA modification methylase 4355364 11564138 Clocl_3727 Clostridium clariflavum DSM 19732 DNA modification methylase YP_005048105.1 4354066 R 720554 CDS YP_005048106.1 374297915 11564139 complement(4355339..4355521) 1 NC_016627.1 hypothetical protein 4355521 11564139 Clocl_3728 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048106.1 4355339 R 720554 CDS YP_005048107.1 374297916 11564140 complement(4355521..4356072) 1 NC_016627.1 PFAM: Phage terminase, small subunit; Phage terminase, small subunit 4356072 11564140 Clocl_3729 Clostridium clariflavum DSM 19732 Phage terminase, small subunit YP_005048107.1 4355521 R 720554 CDS YP_005048108.1 374297917 11564141 complement(4356193..4356552) 1 NC_016627.1 PFAM: HNH endonuclease; restriction endonuclease 4356552 11564141 Clocl_3730 Clostridium clariflavum DSM 19732 restriction endonuclease YP_005048108.1 4356193 R 720554 CDS YP_005048109.1 374297918 11564142 complement(4356686..4356916) 1 NC_016627.1 hypothetical protein 4356916 11564142 Clocl_3731 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048109.1 4356686 R 720554 CDS YP_005048110.1 374297919 11564143 complement(4357041..4357496) 1 NC_016627.1 hypothetical protein 4357496 11564143 Clocl_3732 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048110.1 4357041 R 720554 CDS YP_005048111.1 374297920 11564144 complement(4357588..4357890) 1 NC_016627.1 PFAM: VRR-NUC domain; Holliday junction resolvase 4357890 11564144 Clocl_3733 Clostridium clariflavum DSM 19732 Holliday junction resolvase YP_005048111.1 4357588 R 720554 CDS YP_005048112.1 374297921 11564145 complement(4358190..4360745) 1 NC_016627.1 PFAM: Bifunctional DNA primase/polymerase, N-terminal; bifunctional DNA primase/polymerase famiily protein 4360745 11564145 Clocl_3734 Clostridium clariflavum DSM 19732 bifunctional DNA primase/polymerase famiily protein YP_005048112.1 4358190 R 720554 CDS YP_005048113.1 374297922 11564146 complement(4360742..4361167) 1 NC_016627.1 hypothetical protein 4361167 11564146 Clocl_3735 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048113.1 4360742 R 720554 CDS YP_005048114.1 374297923 11564147 complement(4361183..4362004) 1 NC_016627.1 PFAM: BRO family, N-terminal domain; Phage antirepressor protein KilAC domain; prophage antirepressor 4362004 11564147 Clocl_3736 Clostridium clariflavum DSM 19732 prophage antirepressor YP_005048114.1 4361183 R 720554 CDS YP_005048115.1 374297924 11564148 complement(4362009..4363931) 1 NC_016627.1 PFAM: 3'-5' exonuclease; DNA polymerase family A; DNA polymerase I family protein 4363931 11564148 Clocl_3737 Clostridium clariflavum DSM 19732 DNA polymerase I family protein YP_005048115.1 4362009 R 720554 CDS YP_005048116.1 374297925 11564149 complement(4363989..4364741) 1 NC_016627.1 hypothetical protein 4364741 11564149 Clocl_3738 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048116.1 4363989 R 720554 CDS YP_005048117.1 374297926 11564150 complement(4364863..4365288) 1 NC_016627.1 manually curated; hypothetical protein 4365288 11564150 Clocl_3739 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048117.1 4364863 R 720554 CDS YP_005048118.1 374297927 11564151 complement(4365269..4366714) 1 NC_016627.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; manually curated; DNA/RNA helicase 4366714 11564151 Clocl_3740 Clostridium clariflavum DSM 19732 DNA/RNA helicase YP_005048118.1 4365269 R 720554 CDS YP_005048119.1 374297928 11564152 complement(4366704..4366895) 1 NC_016627.1 hypothetical protein 4366895 11564152 Clocl_3741 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048119.1 4366704 R 720554 CDS YP_005048120.1 374297929 11564153 complement(4366971..4367363) 1 NC_016627.1 PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 4367363 11564153 Clocl_3742 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005048120.1 4366971 R 720554 CDS YP_005048121.1 374297930 11564154 4367617..4368210 1 NC_016627.1 hypothetical protein 4368210 11564154 Clocl_3743 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048121.1 4367617 D 720554 CDS YP_005048122.1 374297931 11564155 complement(4368022..4368936) 1 NC_016627.1 hypothetical protein 4368936 11564155 Clocl_3744 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048122.1 4368022 R 720554 CDS YP_005048123.1 374297932 11564156 complement(4368920..4369462) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor 4369462 11564156 Clocl_3745 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005048123.1 4368920 R 720554 CDS YP_005048124.1 374297933 11564157 complement(4369612..4370151) 1 NC_016627.1 PFAM: Peptidase propeptide and YPEB domain; Peptidase propeptide domain-containing protein 4370151 11564157 Clocl_3746 Clostridium clariflavum DSM 19732 Peptidase propeptide domain-containing protein YP_005048124.1 4369612 R 720554 CDS YP_005048125.1 374297934 11564158 complement(4370197..4370901) 1 NC_016627.1 hypothetical protein 4370901 11564158 Clocl_3747 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048125.1 4370197 R 720554 CDS YP_005048126.1 374297935 11564159 4371132..4371527 1 NC_016627.1 hypothetical protein 4371527 11564159 Clocl_3748 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048126.1 4371132 D 720554 CDS YP_005048127.1 374297936 11564160 complement(4371357..4372727) 1 NC_016627.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA (uracil-5-)-methyltransferase RumA 4372727 11564160 Clocl_3749 Clostridium clariflavum DSM 19732 23S rRNA (uracil-5-)-methyltransferase RumA YP_005048127.1 4371357 R 720554 CDS YP_005048128.1 374297937 11564161 complement(4373266..4374033) 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 4374033 11564161 Clocl_3750 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005048128.1 4373266 R 720554 CDS YP_005048129.1 374297938 11564163 complement(4374717..4375457) 1 NC_016627.1 PFAM: RibD C-terminal domain; pyrimidine reductase, riboflavin biosynthesis 4375457 11564163 Clocl_3752 Clostridium clariflavum DSM 19732 pyrimidine reductase, riboflavin biosynthesis YP_005048129.1 4374717 R 720554 CDS YP_005048130.1 374297939 11564164 complement(4375545..4376144) 1 NC_016627.1 TIGRFAM: uncharacterized domain HDIG; putative domain HDIG-containing protein 4376144 11564164 Clocl_3753 Clostridium clariflavum DSM 19732 putative domain HDIG-containing protein YP_005048130.1 4375545 R 720554 CDS YP_005048131.1 374297940 11564165 complement(4376214..4376567) 1 NC_016627.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family; transcriptional regulator, Spx/MgsR family 4376567 11564165 Clocl_3754 Clostridium clariflavum DSM 19732 transcriptional regulator, Spx/MgsR family YP_005048131.1 4376214 R 720554 CDS YP_005048132.1 374297941 11564166 complement(4376845..4377741) 1 NC_016627.1 PFAM: Protein of unknown function (DUF3298); hypothetical protein 4377741 11564166 Clocl_3755 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048132.1 4376845 R 720554 CDS YP_005048133.1 374297942 11564167 complement(4377743..4378246) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma subunit, SigV 4378246 11564167 Clocl_3756 Clostridium clariflavum DSM 19732 RNA polymerase, sigma subunit, SigV YP_005048133.1 4377743 R 720554 CDS YP_005048134.1 374297943 11564168 complement(4378457..4379239) 1 NC_016627.1 hypothetical protein 4379239 11564168 Clocl_3757 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048134.1 4378457 R 720554 CDS YP_005048135.1 374297944 11564169 complement(4379355..4380773) 1 NC_016627.1 PFAM: Aldehyde dehydrogenase family; NAD-dependent aldehyde dehydrogenase 4380773 11564169 Clocl_3758 Clostridium clariflavum DSM 19732 NAD-dependent aldehyde dehydrogenase YP_005048135.1 4379355 R 720554 CDS YP_005048136.1 374297945 11564170 complement(4380715..4381986) 1 NC_016627.1 PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 4381986 11564170 Clocl_3759 Clostridium clariflavum DSM 19732 alcohol dehydrogenase YP_005048136.1 4380715 R 720554 CDS YP_005048137.1 374297946 11564171 complement(4382502..4383278) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; Zn-dependent hydrolase 4383278 11564171 Clocl_3760 Clostridium clariflavum DSM 19732 Zn-dependent hydrolase YP_005048137.1 4382502 R 720554 CDS YP_005048138.1 374297947 11564172 complement(4383678..4384940) 1 NC_016627.1 PFAM: McrBC 5-methylcytosine restriction system component; McrBC 5-methylcytosine restriction system component 4384940 11564172 Clocl_3761 Clostridium clariflavum DSM 19732 McrBC 5-methylcytosine restriction system component YP_005048138.1 4383678 R 720554 CDS YP_005048139.1 374297948 11564173 complement(4384943..4387237) 1 NC_016627.1 PFAM: AAA domain (dynein-related subfamily); GTPase subunit of restriction endonuclease 4387237 11564173 Clocl_3762 Clostridium clariflavum DSM 19732 GTPase subunit of restriction endonuclease YP_005048139.1 4384943 R 720554 CDS YP_005048140.1 374297949 11564174 complement(4387310..4388002) 1 NC_016627.1 hypothetical protein 4388002 11564174 Clocl_3763 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048140.1 4387310 R 720554 CDS YP_005048141.1 374297950 11564175 complement(4387999..4388445) 1 NC_016627.1 flavodoxin 4388445 11564175 Clocl_3764 Clostridium clariflavum DSM 19732 flavodoxin YP_005048141.1 4387999 R 720554 CDS YP_005048142.1 374297951 11564176 complement(4389025..4389810) 1 NC_016627.1 PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 4389810 11564176 Clocl_3765 Clostridium clariflavum DSM 19732 amino acid ABC transporter ATP-binding protein YP_005048142.1 4389025 R 720554 CDS YP_005048143.1 374297952 11564177 complement(4389826..4390488) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 4390488 11564177 Clocl_3766 Clostridium clariflavum DSM 19732 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_005048143.1 4389826 R 720554 CDS YP_005048144.1 374297953 11564178 complement(4390573..4391382) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein 4391382 11564178 Clocl_3767 Clostridium clariflavum DSM 19732 amino acid ABC transporter substrate-binding protein YP_005048144.1 4390573 R 720554 CDS YP_005048145.1 374297954 11564179 4391562..4391876 1 NC_016627.1 hypothetical protein 4391876 11564179 Clocl_3768 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048145.1 4391562 D 720554 CDS YP_005048146.1 374297955 11564180 complement(4391999..4392205) 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 4392205 11564180 Clocl_3769 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048146.1 4391999 R 720554 CDS YP_005048147.1 374297956 11564181 complement(4392216..4392698) 1 NC_016627.1 hypothetical protein 4392698 11564181 Clocl_3770 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048147.1 4392216 R 720554 CDS YP_005048148.1 374297957 11564182 complement(4393107..4393646) 1 NC_016627.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; O-6-methylguanine DNA methyltransferase 4393646 11564182 Clocl_3771 Clostridium clariflavum DSM 19732 O-6-methylguanine DNA methyltransferase YP_005048148.1 4393107 R 720554 CDS YP_005048149.1 374297958 11564184 4394032..4394421 1 NC_016627.1 hypothetical protein 4394421 11564184 Clocl_3773 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048149.1 4394032 D 720554 CDS YP_005048150.1 374297959 11564185 complement(4394227..4395090) 1 NC_016627.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein 4395090 11564185 Clocl_3774 Clostridium clariflavum DSM 19732 amino acid ABC transporter substrate-binding protein YP_005048150.1 4394227 R 720554 CDS YP_005048151.1 374297960 11564186 complement(4395118..4395891) 1 NC_016627.1 PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 4395891 11564186 Clocl_3775 Clostridium clariflavum DSM 19732 amino acid ABC transporter ATP-binding protein YP_005048151.1 4395118 R 720554 CDS YP_005048152.1 374297961 11564187 complement(4395879..4396556) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter 4396556 11564187 Clocl_3776 Clostridium clariflavum DSM 19732 amino acid ABC transporter YP_005048152.1 4395879 R 720554 CDS YP_005048153.1 374297962 11564188 complement(4396537..4397202) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter 4397202 11564188 Clocl_3777 Clostridium clariflavum DSM 19732 amino acid ABC transporter YP_005048153.1 4396537 R 720554 CDS YP_005048154.1 374297963 11564189 4397565..4397678 1 NC_016627.1 hypothetical protein 4397678 11564189 Clocl_3778 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048154.1 4397565 D 720554 CDS YP_005048155.1 374297964 11564190 complement(4398215..4399444) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 4399444 11564190 Clocl_3779 Clostridium clariflavum DSM 19732 transposase YP_005048155.1 4398215 R 720554 CDS YP_005048156.1 374297965 11564191 complement(4399629..4399934) 1 NC_016627.1 PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 4399934 11564191 Clocl_3780 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048156.1 4399629 R 720554 CDS YP_005048157.1 374297966 11564192 complement(4399936..4400541) 1 NC_016627.1 hypothetical protein 4400541 11564192 Clocl_3781 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048157.1 4399936 R 720554 CDS YP_005048158.1 374297967 11564193 4400774..4400926 1 NC_016627.1 hypothetical protein 4400926 11564193 Clocl_3782 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048158.1 4400774 D 720554 CDS YP_005048159.1 374297968 11564194 complement(4401082..4401966) 1 NC_016627.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; ABC-type metal ion transport system, periplasmic component/surface antigen 4401966 11564194 Clocl_3783 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005048159.1 4401082 R 720554 CDS YP_005048160.1 374297969 11564195 complement(4401988..4402698) 1 NC_016627.1 PFAM: Binding-protein-dependent transport system inner membrane component; ABC-type metal ion transport system permease 4402698 11564195 Clocl_3784 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system permease YP_005048160.1 4401988 R 720554 CDS YP_005048161.1 374297970 11564196 complement(4402738..4403535) 1 NC_016627.1 PFAM: ABC transporter; ABC-type metal ion transport system, ATPase component 4403535 11564196 Clocl_3785 Clostridium clariflavum DSM 19732 ABC-type metal ion transport system, ATPase component YP_005048161.1 4402738 R 720554 CDS YP_005048162.1 374297971 11564197 complement(4403980..4404426) 1 NC_016627.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; rrf2 family protein, putative transcriptional regulator 4404426 11564197 Clocl_3786 Clostridium clariflavum DSM 19732 rrf2 family protein, putative transcriptional regulator YP_005048162.1 4403980 R 720554 CDS YP_005048163.1 374297972 11564198 4404679..4405218 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; acetyltransferase 4405218 11564198 Clocl_3787 Clostridium clariflavum DSM 19732 acetyltransferase YP_005048163.1 4404679 D 720554 CDS YP_005048164.1 374297973 11564199 4405163..4406638 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; manually curated; nitrogenase molybdenum-iron protein, alpha and beta chains 4406638 11564199 Clocl_3788 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005048164.1 4405163 D 720554 CDS YP_005048165.1 374297974 11564200 4406635..4407978 1 NC_016627.1 PFAM: Nitrogenase component 1 type Oxidoreductase; nitrogenase molybdenum-iron protein, alpha and beta chains 4407978 11564200 Clocl_3789 Clostridium clariflavum DSM 19732 nitrogenase molybdenum-iron protein, alpha and beta chains YP_005048165.1 4406635 D 720554 CDS YP_005048166.1 374297975 11564201 4408171..4409721 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4409721 11564201 Clocl_3790 Clostridium clariflavum DSM 19732 transposase YP_005048166.1 4408171 D 720554 CDS YP_005048167.1 374297976 11564203 4410585..4411343 1 NC_016627.1 PFAM: IstB-like ATP binding protein; DNA replication protein 4411343 11564203 Clocl_3792 Clostridium clariflavum DSM 19732 DNA replication protein YP_005048167.1 4410585 D 720554 CDS YP_005048168.1 374297977 11564205 4412278..4413537 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 4413537 11564205 Clocl_3794 Clostridium clariflavum DSM 19732 transposase YP_005048168.1 4412278 D 720554 CDS YP_005048169.1 374297978 11564206 complement(4414126..4415517) 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 4415517 11564206 Clocl_3795 Clostridium clariflavum DSM 19732 transposase family protein YP_005048169.1 4414126 R 720554 CDS YP_005048170.1 374297979 11564207 complement(4415644..4416591) 1 NC_016627.1 PFAM: HlyD family secretion protein; multidrug resistance efflux pump 4416591 11564207 Clocl_3796 Clostridium clariflavum DSM 19732 multidrug resistance efflux pump YP_005048170.1 4415644 R 720554 CDS YP_005048171.1 374297980 11564208 complement(4416588..4417271) 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 4417271 11564208 Clocl_3797 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005048171.1 4416588 R 720554 CDS YP_005048172.1 374297981 11564209 complement(4417344..4419833) 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 4419833 11564209 Clocl_3798 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005048172.1 4417344 R 720554 CDS YP_005048173.1 374297982 11564210 complement(4419937..4420773) 1 NC_016627.1 hypothetical protein 4420773 11564210 Clocl_3799 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048173.1 4419937 R 720554 CDS YP_005048174.1 374297983 11564211 complement(4420770..4421336) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1700); manually curated; hypothetical protein 4421336 11564211 Clocl_3800 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048174.1 4420770 R 720554 CDS YP_005048175.1 374297984 11564212 complement(4421341..4421673) 1 NC_016627.1 PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator 4421673 11564212 Clocl_3801 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048175.1 4421341 R 720554 CDS YP_005048176.1 374297985 11564213 complement(4421972..4422124) 1 NC_016627.1 hypothetical protein 4422124 11564213 Clocl_3802 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048176.1 4421972 R 720554 CDS YP_005048177.1 374297986 11564214 complement(4422194..4423471) 1 NC_016627.1 manually curated; hypothetical protein 4423471 11564214 Clocl_3803 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048177.1 4422194 R 720554 CDS YP_005048178.1 374297987 11564215 complement(4423494..4423631) 1 NC_016627.1 hypothetical protein 4423631 11564215 Clocl_3804 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048178.1 4423494 R 720554 CDS YP_005048179.1 374297988 11564216 complement(4423725..4423871) 1 NC_016627.1 hypothetical protein 4423871 11564216 Clocl_3805 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048179.1 4423725 R 720554 CDS YP_005048180.1 374297989 11564217 4424292..4425581 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4425581 11564217 Clocl_3806 Clostridium clariflavum DSM 19732 transposase YP_005048180.1 4424292 D 720554 CDS YP_005048181.1 374297990 11564218 complement(4425849..4425986) 1 NC_016627.1 hypothetical protein 4425986 11564218 Clocl_3807 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048181.1 4425849 R 720554 CDS YP_005048182.1 374297991 11564219 4426212..4426505 1 NC_016627.1 PFAM: Transposase; transposase 4426505 11564219 Clocl_3808 Clostridium clariflavum DSM 19732 transposase YP_005048182.1 4426212 D 720554 CDS YP_005048183.1 374297992 11564220 4426465..4427364 1 NC_016627.1 PFAM: Integrase core domain; transposase 4427364 11564220 Clocl_3809 Clostridium clariflavum DSM 19732 transposase YP_005048183.1 4426465 D 720554 CDS YP_005048184.1 374297993 11564221 complement(4428371..4429774) 1 NC_016627.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4429774 11564221 Clocl_3810 Clostridium clariflavum DSM 19732 cobyrinic acid a,c-diamide synthase YP_005048184.1 4428371 R 720554 CDS YP_005048185.1 374297994 11564222 complement(4430062..4430706) 1 NC_016627.1 PFAM: Methyltransferase domain; methylase involved in ubiquinone/menaquinone biosynthesis 4430706 11564222 Clocl_3811 Clostridium clariflavum DSM 19732 methylase involved in ubiquinone/menaquinone biosynthesis YP_005048185.1 4430062 R 720554 CDS YP_005048186.1 374297995 11564223 complement(4430873..4432012) 1 NC_016627.1 PFAM: SPFH domain / Band 7 family; putative virion core protein (lumpy skin disease virus) 4432012 11564223 Clocl_3812 Clostridium clariflavum DSM 19732 putative virion core protein (lumpy skin disease virus) YP_005048186.1 4430873 R 720554 CDS YP_005048187.1 374297996 11564224 4432479..4433402 1 NC_016627.1 PFAM: FlgN protein; Peptidase family M23; metalloendopeptidase-like membrane protein 4433402 11564224 Clocl_3813 Clostridium clariflavum DSM 19732 metalloendopeptidase-like membrane protein YP_005048187.1 4432479 D 720554 CDS YP_005048188.1 374297997 11564225 4433420..4433839 1 NC_016627.1 PFAM: Protein of unknown function, DUF583; Integral membrane protein CcmA involved in cell shape determination 4433839 11564225 Clocl_3814 Clostridium clariflavum DSM 19732 Integral membrane protein CcmA involved in cell shape determination YP_005048188.1 4433420 D 720554 CDS YP_005048189.1 374297998 11564226 complement(4433945..4434607) 1 NC_016627.1 PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB; sporulation protein YunB 4434607 11564226 Clocl_3815 Clostridium clariflavum DSM 19732 sporulation protein YunB YP_005048189.1 4433945 R 720554 CDS YP_005048190.1 374297999 11564227 4434868..4437270 1 NC_016627.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; penicillin-binding protein 4437270 11564227 Clocl_3816 Clostridium clariflavum DSM 19732 penicillin-binding protein YP_005048190.1 4434868 D 720554 CDS YP_005048191.1 374298000 11564228 complement(4437460..4439082) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4439082 11564228 Clocl_3817 Clostridium clariflavum DSM 19732 transposase YP_005048191.1 4437460 R 720554 CDS YP_005048192.1 374298001 11564229 complement(4439213..4440424) 1 NC_016627.1 PFAM: Predicted permease; lipoprotein release ABC transporter permease 4440424 11564229 Clocl_3818 Clostridium clariflavum DSM 19732 lipoprotein release ABC transporter permease YP_005048192.1 4439213 R 720554 CDS YP_005048193.1 374298002 11564230 complement(4440439..4441716) 1 NC_016627.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; multidrug resistance efflux pump 4441716 11564230 Clocl_3819 Clostridium clariflavum DSM 19732 multidrug resistance efflux pump YP_005048193.1 4440439 R 720554 CDS YP_005048194.1 374298003 11564231 complement(4441791..4442525) 1 NC_016627.1 PFAM: ABC transporter; antimicrobial peptide ABC transporter ATPase 4442525 11564231 Clocl_3820 Clostridium clariflavum DSM 19732 antimicrobial peptide ABC transporter ATPase YP_005048194.1 4441791 R 720554 CDS YP_005048195.1 374298004 11564232 complement(4442672..4443757) 1 NC_016627.1 PFAM: Outer membrane efflux protein; outer membrane protein 4443757 11564232 Clocl_3821 Clostridium clariflavum DSM 19732 outer membrane protein YP_005048195.1 4442672 R 720554 CDS YP_005048196.1 374298005 11564233 complement(4443763..4444926) 1 NC_016627.1 hypothetical protein 4444926 11564233 Clocl_3822 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048196.1 4443763 R 720554 CDS YP_005048197.1 374298006 11564234 complement(4444931..4445755) 1 NC_016627.1 PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 4445755 11564234 Clocl_3823 Clostridium clariflavum DSM 19732 glutamate 5-kinase YP_005048197.1 4444931 R 720554 CDS YP_005048198.1 374298007 11564235 4446130..4446858 1 NC_016627.1 PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family; hypothetical protein 4446858 11564235 Clocl_3824 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048198.1 4446130 D 720554 CDS YP_005048199.1 374298008 11564236 complement(4447025..4448026) 1 NC_016627.1 hypothetical protein 4448026 11564236 Clocl_3825 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048199.1 4447025 R 720554 CDS YP_005048200.1 374298009 11564237 complement(4448056..4448748) 1 NC_016627.1 hypothetical protein 4448748 11564237 Clocl_3826 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048200.1 4448056 R 720554 CDS YP_005048201.1 374298010 11564238 complement(4449065..4449394) 1 NC_016627.1 PFAM: Protein of unknown function, DUF486; hypothetical protein 4449394 11564238 Clocl_3827 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048201.1 4449065 R 720554 CDS YP_005048202.1 374298011 11564239 complement(4449415..4450617) 1 NC_016627.1 manually curated; hypothetical protein 4450617 11564239 Clocl_3828 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048202.1 4449415 R 720554 CDS YP_005048203.1 374298012 11564240 4450932..4451321 1 NC_016627.1 hypothetical protein 4451321 11564240 Clocl_3829 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048203.1 4450932 D 720554 CDS YP_005048204.1 374298013 11564241 complement(4451316..4451660) 1 NC_016627.1 hypothetical protein 4451660 11564241 Clocl_3830 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048204.1 4451316 R 720554 CDS YP_005048205.1 374298014 11564242 4451865..4452173 1 NC_016627.1 PFAM: Carbohydrate binding domain (family 25); Carbohydrate binding domain (family 25) 4452173 11564242 Clocl_3831 Clostridium clariflavum DSM 19732 Carbohydrate binding domain (family 25) YP_005048205.1 4451865 D 720554 CDS YP_005048206.1 374298015 11564243 complement(4452223..4454148) 1 NC_016627.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; aconitate hydratase, putative, Aquifex type 4454148 11564243 Clocl_3832 Clostridium clariflavum DSM 19732 aconitate hydratase, putative, Aquifex type YP_005048206.1 4452223 R 720554 CDS YP_005048207.1 374298016 11564244 complement(4454342..4455694) 1 NC_016627.1 PFAM: Citrate synthase; citrate synthase 4455694 11564244 Clocl_3833 Clostridium clariflavum DSM 19732 citrate synthase YP_005048207.1 4454342 R 720554 CDS YP_005048208.1 374298017 11564245 complement(4455688..4456359) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; transcriptional regulator 4456359 11564245 Clocl_3834 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005048208.1 4455688 R 720554 CDS YP_005048209.1 374298018 11564246 4456840..4457739 1 NC_016627.1 PFAM: Protein of unknown function (DUF445); hypothetical protein 4457739 11564246 Clocl_3835 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048209.1 4456840 D 720554 CDS YP_005048210.1 374298019 11564247 complement(4457797..4458711) 1 NC_016627.1 hypothetical protein 4458711 11564247 Clocl_3836 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048210.1 4457797 R 720554 CDS YP_005048211.1 374298020 11564249 complement(4459751..4462171) 1 NC_016627.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; putative ATP-dependent protease 4462171 11564249 Clocl_3838 Clostridium clariflavum DSM 19732 putative ATP-dependent protease YP_005048211.1 4459751 R 720554 CDS YP_005048212.1 374298021 11564250 complement(4462662..4463117) 1 NC_016627.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 4463117 11564250 Clocl_3839 Clostridium clariflavum DSM 19732 ribosomal-protein-alanine acetyltransferase YP_005048212.1 4462662 R 720554 CDS YP_005048213.1 374298022 11564251 complement(4463117..4463833) 1 NC_016627.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; hypothetical protein 4463833 11564251 Clocl_3840 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048213.1 4463117 R 720554 CDS YP_005048214.1 374298023 11564252 complement(4463882..4464349) 1 NC_016627.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; YjeE family ATPase 4464349 11564252 Clocl_3841 Clostridium clariflavum DSM 19732 YjeE family ATPase YP_005048214.1 4463882 R 720554 CDS YP_005048215.1 374298024 11564253 complement(4464346..4465524) 1 NC_016627.1 PFAM: Amidohydrolase family; amidohydrolase 4465524 11564253 Clocl_3842 Clostridium clariflavum DSM 19732 amidohydrolase YP_005048215.1 4464346 R 720554 CDS YP_005048216.1 374298025 11564254 4465817..4466266 1 NC_016627.1 hypothetical protein 4466266 11564254 Clocl_3843 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048216.1 4465817 D 720554 CDS YP_005048217.1 374298026 11564255 complement(4466434..4467597) 1 NC_016627.1 PFAM: Major Facilitator Superfamily; fucose permease 4467597 11564255 Clocl_3844 Clostridium clariflavum DSM 19732 fucose permease YP_005048217.1 4466434 R 720554 CDS YP_005048218.1 374298027 11564256 complement(4467668..4468852) 1 NC_016627.1 PFAM: FtsH Extracellular; ATPase family associated with various cellular activities (AAA); ATP-dependent Zn protease 4468852 11564256 Clocl_3845 Clostridium clariflavum DSM 19732 ATP-dependent Zn protease YP_005048218.1 4467668 R 720554 CDS YP_005048219.1 374298028 11564257 4469011..4469328 1 NC_016627.1 PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator 4469328 11564257 Clocl_3846 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048219.1 4469011 D 720554 CDS YP_005048220.1 374298029 11564258 4469325..4469834 1 NC_016627.1 PFAM: Protein of unknown function (DUF2812); hypothetical protein 4469834 11564258 Clocl_3847 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048220.1 4469325 D 720554 CDS YP_005048221.1 374298030 11564259 4469993..4471339 1 NC_016627.1 manually curated; hypothetical protein 4471339 11564259 Clocl_3848 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048221.1 4469993 D 720554 CDS YP_005048222.1 374298031 11564260 complement(4471460..4472581) 1 NC_016627.1 PFAM: Aldo/keto reductase family; putative oxidoreductase of aldo/keto reductase family 4472581 11564260 Clocl_3849 Clostridium clariflavum DSM 19732 putative oxidoreductase of aldo/keto reductase family YP_005048222.1 4471460 R 720554 CDS YP_005048223.1 374298032 11564262 4473677..4473958 1 NC_016627.1 hypothetical protein 4473958 11564262 Clocl_3851 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048223.1 4473677 D 720554 CDS YP_005048224.1 374298033 11564263 complement(4474224..4475453) 1 NC_016627.1 PFAM: Transposase, Mutator family; transposase 4475453 11564263 Clocl_3852 Clostridium clariflavum DSM 19732 transposase YP_005048224.1 4474224 R 720554 CDS YP_005048225.1 374298034 11564264 4475647..4476399 1 NC_016627.1 hypothetical protein 4476399 11564264 Clocl_3853 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048225.1 4475647 D 720554 CDS YP_005048226.1 374298035 11564265 complement(4476829..4477203) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1696); hypothetical protein 4477203 11564265 Clocl_3854 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048226.1 4476829 R 720554 CDS YP_005048227.1 374298036 11564266 complement(4477466..4478350) 1 NC_016627.1 PFAM: MerR family regulatory protein; manually curated; putative transcriptional regulator 4478350 11564266 Clocl_3855 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048227.1 4477466 R 720554 CDS YP_005048228.1 374298037 11564267 complement(4478667..4478912) 1 NC_016627.1 hypothetical protein 4478912 11564267 Clocl_3856 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048228.1 4478667 R 720554 CDS YP_005048229.1 374298038 11564268 complement(4479190..4479582) 1 NC_016627.1 PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 4479582 11564268 Clocl_3857 Clostridium clariflavum DSM 19732 30S ribosomal protein S9 YP_005048229.1 4479190 R 720554 CDS YP_005048230.1 374298039 11564269 complement(4479610..4480038) 1 NC_016627.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 4480038 11564269 Clocl_3858 Clostridium clariflavum DSM 19732 50S ribosomal protein L13 YP_005048230.1 4479610 R 720554 CDS YP_005048231.1 374298040 11564270 complement(4480379..4481113) 1 NC_016627.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; pseudouridylate synthase I 4481113 11564270 Clocl_3859 Clostridium clariflavum DSM 19732 pseudouridylate synthase I YP_005048231.1 4480379 R 720554 CDS YP_005048232.1 374298041 11564271 complement(4481276..4482220) 1 NC_016627.1 PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); ROK family protein, putative glucokinase 4482220 11564271 Clocl_3860 Clostridium clariflavum DSM 19732 ROK family protein, putative glucokinase YP_005048232.1 4481276 R 720554 CDS YP_005048233.1 374298042 11560605 complement(4482355..4483143) 1 NC_016627.1 PFAM: Cobalt transport protein; ABC-type cobalt transport system, permease component CbiQ 4483143 11560605 Clocl_3861 Clostridium clariflavum DSM 19732 ABC-type cobalt transport system, permease component CbiQ YP_005048233.1 4482355 R 720554 CDS YP_005048234.1 374298043 11560606 complement(4483217..4484080) 1 NC_016627.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; manually curated; cobalt ABC transporter ATPase 4484080 11560606 Clocl_3862 Clostridium clariflavum DSM 19732 cobalt ABC transporter ATPase YP_005048234.1 4483217 R 720554 CDS YP_005048235.1 374298044 11560607 4484327..4484920 1 NC_016627.1 PFAM: Methyltransferase small domain; 16S RNA G1207 methylase RsmC 4484920 11560607 Clocl_3863 Clostridium clariflavum DSM 19732 16S RNA G1207 methylase RsmC YP_005048235.1 4484327 D 720554 CDS YP_005048236.1 374298045 11560608 complement(4485051..4485899) 1 NC_016627.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; cobalt ABC transporter ATPase 4485899 11560608 Clocl_3864 Clostridium clariflavum DSM 19732 cobalt ABC transporter ATPase YP_005048236.1 4485051 R 720554 CDS YP_005048237.1 374298046 11560609 complement(4486044..4486568) 1 NC_016627.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 4486568 11560609 Clocl_3865 Clostridium clariflavum DSM 19732 50S ribosomal protein L17 YP_005048237.1 4486044 R 720554 CDS YP_005048238.1 374298047 11560610 complement(4486614..4487561) 1 NC_016627.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 4487561 11560610 Clocl_3866 Clostridium clariflavum DSM 19732 DNA-directed RNA polymerase subunit alpha YP_005048238.1 4486614 R 720554 CDS YP_005048239.1 374298048 11560611 complement(4487764..4488390) 1 NC_016627.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 4488390 11560611 Clocl_3867 Clostridium clariflavum DSM 19732 30S ribosomal protein S4 YP_005048239.1 4487764 R 720554 CDS YP_005048240.1 374298049 11560612 complement(4488468..4488872) 1 NC_016627.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 4488872 11560612 Clocl_3868 Clostridium clariflavum DSM 19732 30S ribosomal protein S11 YP_005048240.1 4488468 R 720554 CDS YP_005048241.1 374298050 11560613 complement(4488894..4489265) 1 NC_016627.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 4489265 11560613 Clocl_3869 Clostridium clariflavum DSM 19732 30S ribosomal protein S13 YP_005048241.1 4488894 R 720554 CDS YP_005048242.1 374298051 11560614 complement(4489551..4489664) 1 NC_016627.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 4489664 11560614 Clocl_3870 Clostridium clariflavum DSM 19732 50S ribosomal protein L36 YP_005048242.1 4489551 R 720554 CDS YP_005048243.1 374298052 11560615 complement(4489787..4490005) 1 NC_016627.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor IF-1 4490005 11560615 Clocl_3871 Clostridium clariflavum DSM 19732 translation initiation factor IF-1 YP_005048243.1 4489787 R 720554 CDS YP_005048244.1 374298053 11560616 complement(4490138..4490404) 1 NC_016627.1 50S ribosomal protein L14E 4490404 11560616 Clocl_3872 Clostridium clariflavum DSM 19732 50S ribosomal protein L14E YP_005048244.1 4490138 R 720554 CDS YP_005048245.1 374298054 11560617 complement(4490435..4491205) 1 NC_016627.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase 4491205 11560617 Clocl_3873 Clostridium clariflavum DSM 19732 methionine aminopeptidase YP_005048245.1 4490435 R 720554 CDS YP_005048246.1 374298055 11560618 complement(4491206..4491853) 1 NC_016627.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase family protein 4491853 11560618 Clocl_3874 Clostridium clariflavum DSM 19732 adenylate kinase family protein YP_005048246.1 4491206 R 720554 CDS YP_005048247.1 374298056 11560619 complement(4492201..4493490) 1 NC_016627.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit secY/sec61 alpha 4493490 11560619 Clocl_3875 Clostridium clariflavum DSM 19732 protein translocase subunit secY/sec61 alpha YP_005048247.1 4492201 R 720554 CDS YP_005048248.1 374298057 11560620 complement(4493492..4493935) 1 NC_016627.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 4493935 11560620 Clocl_3876 Clostridium clariflavum DSM 19732 50S ribosomal protein L15 YP_005048248.1 4493492 R 720554 CDS YP_005048249.1 374298058 11560621 complement(4493951..4494130) 1 NC_016627.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 4494130 11560621 Clocl_3877 Clostridium clariflavum DSM 19732 50S ribosomal protein L30 YP_005048249.1 4493951 R 720554 CDS YP_005048250.1 374298059 11560622 complement(4494143..4494643) 1 NC_016627.1 PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 4494643 11560622 Clocl_3878 Clostridium clariflavum DSM 19732 30S ribosomal protein S5 YP_005048250.1 4494143 R 720554 CDS YP_005048251.1 374298060 11560623 complement(4494662..4495030) 1 NC_016627.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 4495030 11560623 Clocl_3879 Clostridium clariflavum DSM 19732 50S ribosomal protein L18 YP_005048251.1 4494662 R 720554 CDS YP_005048252.1 374298061 11560624 complement(4495047..4495595) 1 NC_016627.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 4495595 11560624 Clocl_3880 Clostridium clariflavum DSM 19732 50S ribosomal protein L6 YP_005048252.1 4495047 R 720554 CDS YP_005048253.1 374298062 11560625 complement(4495700..4496098) 1 NC_016627.1 PFAM: Ribosomal protein S8; 30S ribosomal protein S8 4496098 11560625 Clocl_3881 Clostridium clariflavum DSM 19732 30S ribosomal protein S8 YP_005048253.1 4495700 R 720554 CDS YP_005048254.1 374298063 11560626 complement(4496124..4496309) 1 NC_016627.1 PFAM: Ribosomal protein S14p/S29e; manually curated; 30S ribosomal protein S14 4496309 11560626 Clocl_3882 Clostridium clariflavum DSM 19732 30S ribosomal protein S14 YP_005048254.1 4496124 R 720554 CDS YP_005048255.1 374298064 11560627 complement(4496325..4496867) 1 NC_016627.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 4496867 11560627 Clocl_3883 Clostridium clariflavum DSM 19732 50S ribosomal protein L5 YP_005048255.1 4496325 R 720554 CDS YP_005048256.1 374298065 11560628 complement(4496896..4497243) 1 NC_016627.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 4497243 11560628 Clocl_3884 Clostridium clariflavum DSM 19732 50S ribosomal protein L24 YP_005048256.1 4496896 R 720554 CDS YP_005048257.1 374298066 11560629 complement(4497262..4497630) 1 NC_016627.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 4497630 11560629 Clocl_3885 Clostridium clariflavum DSM 19732 50S ribosomal protein L14 YP_005048257.1 4497262 R 720554 CDS YP_005048258.1 374298067 11560630 complement(4497656..4497916) 1 NC_016627.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 4497916 11560630 Clocl_3886 Clostridium clariflavum DSM 19732 30S ribosomal protein S17 YP_005048258.1 4497656 R 720554 CDS YP_005048259.1 374298068 11560631 complement(4497945..4498148) 1 NC_016627.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 4498148 11560631 Clocl_3887 Clostridium clariflavum DSM 19732 50S ribosomal protein L29 YP_005048259.1 4497945 R 720554 CDS YP_005048260.1 374298069 11560632 complement(4498138..4498575) 1 NC_016627.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 4498575 11560632 Clocl_3888 Clostridium clariflavum DSM 19732 50S ribosomal protein L16 YP_005048260.1 4498138 R 720554 CDS YP_005048261.1 374298070 11560633 complement(4498575..4499243) 1 NC_016627.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; ribosomal protein S3, eukaryotic/archaeal type; 30S ribosomal protein S3 4499243 11560633 Clocl_3889 Clostridium clariflavum DSM 19732 30S ribosomal protein S3 YP_005048261.1 4498575 R 720554 CDS YP_005048262.1 374298071 11560634 complement(4499263..4499685) 1 NC_016627.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; manually curated; 50S ribosomal protein L22 4499685 11560634 Clocl_3890 Clostridium clariflavum DSM 19732 50S ribosomal protein L22 YP_005048262.1 4499263 R 720554 CDS YP_005048263.1 374298072 11560635 complement(4499775..4500059) 1 NC_016627.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; manually curated; 30S ribosomal protein S19 4500059 11560635 Clocl_3891 Clostridium clariflavum DSM 19732 30S ribosomal protein S19 YP_005048263.1 4499775 R 720554 CDS YP_005048264.1 374298073 11560636 complement(4500148..4500981) 1 NC_016627.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 4500981 11560636 Clocl_3892 Clostridium clariflavum DSM 19732 50S ribosomal protein L2 YP_005048264.1 4500148 R 720554 CDS YP_005048265.1 374298074 11560637 complement(4501024..4501377) 1 NC_016627.1 PFAM: Ribosomal protein L23; 50S ribosomal protein L23 4501377 11560637 Clocl_3893 Clostridium clariflavum DSM 19732 50S ribosomal protein L23 YP_005048265.1 4501024 R 720554 CDS YP_005048266.1 374298075 11560638 complement(4501377..4502000) 1 NC_016627.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 4502000 11560638 Clocl_3894 Clostridium clariflavum DSM 19732 50S ribosomal protein L4 YP_005048266.1 4501377 R 720554 CDS YP_005048267.1 374298076 11560639 complement(4502024..4502662) 1 NC_016627.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 4502662 11560639 Clocl_3895 Clostridium clariflavum DSM 19732 50S ribosomal protein L3 YP_005048267.1 4502024 R 720554 CDS YP_005048268.1 374298077 11560640 complement(4502753..4503064) 1 NC_016627.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 4503064 11560640 Clocl_3896 Clostridium clariflavum DSM 19732 30S ribosomal protein S10 YP_005048268.1 4502753 R 720554 CDS YP_005048269.1 374298078 11560641 complement(4503955..4504266) 1 NC_016627.1 PFAM: TM2 domain; hypothetical protein 4504266 11560641 Clocl_3897 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048269.1 4503955 R 720554 CDS YP_005048270.1 374298079 11560646 complement(4510663..4512258) 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; membrane protein involved in the export of O-antigen and teichoic acid 4512258 11560646 Clocl_3902 Clostridium clariflavum DSM 19732 membrane protein involved in the export of O-antigen and teichoic acid YP_005048270.1 4510663 R 720554 CDS YP_005048271.1 374298080 11560651 complement(4518888..4519310) 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; anti-sigma regulatory factor 4519310 11560651 Clocl_3907 Clostridium clariflavum DSM 19732 anti-sigma regulatory factor YP_005048271.1 4518888 R 720554 CDS YP_005048272.1 374298081 11560652 complement(4519441..4520199) 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; sigma-B/F/G subfamily RNA polymerase sigma-70 factor 4520199 11560652 Clocl_3908 Clostridium clariflavum DSM 19732 sigma-B/F/G subfamily RNA polymerase sigma-70 factor YP_005048272.1 4519441 R 720554 CDS YP_005048273.1 374298082 11560653 complement(4520202..4520582) 1 NC_016627.1 anti-sigma regulatory factor 4520582 11560653 Clocl_3909 Clostridium clariflavum DSM 19732 anti-sigma regulatory factor YP_005048273.1 4520202 R 720554 CDS YP_005048274.1 374298083 11560654 complement(4520598..4520912) 1 NC_016627.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor 4520912 11560654 Clocl_3910 Clostridium clariflavum DSM 19732 anti-anti-sigma factor YP_005048274.1 4520598 R 720554 CDS YP_005048275.1 374298084 11560655 complement(4521422..4522942) 1 NC_016627.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase (class II) 4522942 11560655 Clocl_3911 Clostridium clariflavum DSM 19732 lysyl-tRNA synthetase (class II) YP_005048275.1 4521422 R 720554 CDS YP_005048276.1 374298085 11560656 complement(4523176..4523652) 1 NC_016627.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA 4523652 11560656 Clocl_3912 Clostridium clariflavum DSM 19732 transcription elongation factor GreA YP_005048276.1 4523176 R 720554 CDS YP_005048277.1 374298086 11560657 complement(4524184..4525164) 1 NC_016627.1 hypothetical protein 4525164 11560657 Clocl_3913 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048277.1 4524184 R 720554 CDS YP_005048278.1 374298087 11560658 complement(4525300..4527057) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18; Bacterial SH3 domain; putative glycosyl hydrolase 4527057 11560658 Clocl_3914 Clostridium clariflavum DSM 19732 putative glycosyl hydrolase YP_005048278.1 4525300 R 720554 CDS YP_005048279.1 374298088 11560659 complement(4527226..4527729) 1 NC_016627.1 hypothetical protein 4527729 11560659 Clocl_3915 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048279.1 4527226 R 720554 CDS YP_005048280.1 374298089 11560660 complement(4527752..4528795) 1 NC_016627.1 PFAM: PilZ domain; PilZ domain-containing protein 4528795 11560660 Clocl_3916 Clostridium clariflavum DSM 19732 PilZ domain-containing protein YP_005048280.1 4527752 R 720554 CDS YP_005048281.1 374298090 11560661 complement(4529093..4531726) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 9; Dockerin type I repeat; Carbohydrate binding domain; N-terminal ig-like domain of cellulase; putative carbohydrate binding protein,dockerin-like protein 4531726 11560661 Clocl_3917 Clostridium clariflavum DSM 19732 putative carbohydrate binding protein,dockerin-like protein YP_005048281.1 4529093 R 720554 CDS YP_005048282.1 374298091 11560662 complement(4532396..4534033) 1 NC_016627.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroL 4534033 11560662 Clocl_3918 Clostridium clariflavum DSM 19732 chaperonin GroL YP_005048282.1 4532396 R 720554 CDS YP_005048283.1 374298092 11560663 complement(4534219..4534503) 1 NC_016627.1 PFAM: Chaperonin 10 Kd subunit; Co-chaperonin GroES 4534503 11560663 Clocl_3919 Clostridium clariflavum DSM 19732 Co-chaperonin GroES YP_005048283.1 4534219 R 720554 CDS YP_005048284.1 374298093 11560664 complement(4535018..4537837) 1 NC_016627.1 PFAM: Dockerin type I repeat; dockerin-like protein 4537837 11560664 Clocl_3920 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005048284.1 4535018 R 720554 CDS YP_005048285.1 374298094 11560665 complement(4538012..4539151) 1 NC_016627.1 PFAM: Divergent AAA domain; putative transcriptional regulator with HTH domain 4539151 11560665 Clocl_3921 Clostridium clariflavum DSM 19732 putative transcriptional regulator with HTH domain YP_005048285.1 4538012 R 720554 CDS YP_005048286.1 374298095 11560666 complement(4539173..4539832) 1 NC_016627.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase 4539832 11560666 Clocl_3922 Clostridium clariflavum DSM 19732 phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase YP_005048286.1 4539173 R 720554 CDS YP_005048287.1 374298096 11560667 complement(4539859..4540620) 1 NC_016627.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 4540620 11560667 Clocl_3923 Clostridium clariflavum DSM 19732 Imidazole glycerol phosphate synthase cyclase subunit YP_005048287.1 4539859 R 720554 CDS YP_005048288.1 374298097 11560668 complement(4540672..4541385) 1 NC_016627.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 4541385 11560668 Clocl_3924 Clostridium clariflavum DSM 19732 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_005048288.1 4540672 R 720554 CDS YP_005048289.1 374298098 11560669 complement(4541503..4542135) 1 NC_016627.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase subunit hisH 4542135 11560669 Clocl_3925 Clostridium clariflavum DSM 19732 imidazole glycerol phosphate synthase subunit hisH YP_005048289.1 4541503 R 720554 CDS YP_005048290.1 374298099 11560670 complement(4542258..4543142) 1 NC_016627.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 4543142 11560670 Clocl_3926 Clostridium clariflavum DSM 19732 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_005048290.1 4542258 R 720554 CDS YP_005048291.1 374298100 11560671 complement(4543284..4543871) 1 NC_016627.1 PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 4543871 11560671 Clocl_3927 Clostridium clariflavum DSM 19732 imidazoleglycerol-phosphate dehydratase YP_005048291.1 4543284 R 720554 CDS YP_005048292.1 374298101 11560672 complement(4544017..4545090) 1 NC_016627.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 4545090 11560672 Clocl_3928 Clostridium clariflavum DSM 19732 histidinol-phosphate aminotransferase YP_005048292.1 4544017 R 720554 CDS YP_005048293.1 374298102 11560673 complement(4545220..4546512) 1 NC_016627.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 4546512 11560673 Clocl_3929 Clostridium clariflavum DSM 19732 histidinol dehydrogenase YP_005048293.1 4545220 R 720554 CDS YP_005048294.1 374298103 11560674 complement(4546519..4547160) 1 NC_016627.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase catalytic subunit 4547160 11560674 Clocl_3930 Clostridium clariflavum DSM 19732 ATP phosphoribosyltransferase catalytic subunit YP_005048294.1 4546519 R 720554 CDS YP_005048295.1 374298104 11560675 complement(4547164..4548420) 1 NC_016627.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; histidyl-tRNA synthetase; ATP phosphoribosyltransferase regulatory subunit 4548420 11560675 Clocl_3931 Clostridium clariflavum DSM 19732 ATP phosphoribosyltransferase regulatory subunit YP_005048295.1 4547164 R 720554 CDS YP_005048296.1 374298105 11560676 complement(4548662..4550356) 1 NC_016627.1 PFAM: Cellulase (glycosyl hydrolase family 5); Dockerin type I repeat; endoglucanase 4550356 11560676 Clocl_3932 Clostridium clariflavum DSM 19732 endoglucanase YP_005048296.1 4548662 R 720554 CDS YP_005048297.1 374298106 11560677 complement(4550651..4552126) 1 NC_016627.1 hypothetical protein 4552126 11560677 Clocl_3933 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048297.1 4550651 R 720554 CDS YP_005048298.1 374298107 11560678 complement(4552196..4553173) 1 NC_016627.1 hypothetical protein 4553173 11560678 Clocl_3934 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048298.1 4552196 R 720554 CDS YP_005048299.1 374298108 11560679 complement(4553657..4555207) 1 NC_016627.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase 4555207 11560679 Clocl_3935 Clostridium clariflavum DSM 19732 transposase YP_005048299.1 4553657 R 720554 CDS YP_005048300.1 374298109 11560680 complement(4555358..4555603) 1 NC_016627.1 hypothetical protein 4555603 11560680 Clocl_3936 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048300.1 4555358 R 720554 CDS YP_005048301.1 374298110 11560681 complement(4555600..4556205) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, tetR family; transcriptional regulator 4556205 11560681 Clocl_3937 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005048301.1 4555600 R 720554 CDS YP_005048302.1 374298111 11560682 4556449..4557327 1 NC_016627.1 PFAM: VIT family; Rubrerythrin; hypothetical protein 4557327 11560682 Clocl_3938 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048302.1 4556449 D 720554 CDS YP_005048303.1 374298112 11560683 complement(4557538..4559727) 1 NC_016627.1 PFAM: S-layer homology domain; putative S-layer protein 4559727 11560683 Clocl_3939 Clostridium clariflavum DSM 19732 putative S-layer protein YP_005048303.1 4557538 R 720554 CDS YP_005048304.1 374298113 11560684 complement(4559905..4562124) 1 NC_016627.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA; ATP-dependent DNA helicase PcrA 4562124 11560684 Clocl_3940 Clostridium clariflavum DSM 19732 ATP-dependent DNA helicase PcrA YP_005048304.1 4559905 R 720554 CDS YP_005048305.1 374298114 11560685 complement(4562252..4562782) 1 NC_016627.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein 4562782 11560685 Clocl_3941 Clostridium clariflavum DSM 19732 ribosomal subunit interface protein YP_005048305.1 4562252 R 720554 CDS YP_005048306.1 374298115 11560686 complement(4563775..4564116) 1 NC_016627.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein PII 4564116 11560686 Clocl_3942 Clostridium clariflavum DSM 19732 nitrogen regulatory protein PII YP_005048306.1 4563775 R 720554 CDS YP_005048307.1 374298116 11560687 complement(4564103..4565446) 1 NC_016627.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; ammonium transporter (TC 1.A.11) 4565446 11560687 Clocl_3943 Clostridium clariflavum DSM 19732 ammonium transporter (TC 1.A.11) YP_005048307.1 4564103 R 720554 CDS YP_005048308.1 374298117 11560688 complement(4565702..4566277) 1 NC_016627.1 PFAM: Response regulator receiver domain; ANTAR domain; response regulator with putative antiterminator output domain 4566277 11560688 Clocl_3944 Clostridium clariflavum DSM 19732 response regulator with putative antiterminator output domain YP_005048308.1 4565702 R 720554 CDS YP_005048309.1 374298118 11560689 complement(4566407..4567741) 1 NC_016627.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase, type I 4567741 11560689 Clocl_3945 Clostridium clariflavum DSM 19732 glutamine synthetase, type I YP_005048309.1 4566407 R 720554 CDS YP_005048310.1 374298119 11560690 complement(4568499..4569776) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 4569776 11560690 Clocl_3946 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005048310.1 4568499 R 720554 CDS YP_005048311.1 374298120 11560691 complement(4570210..4571730) 1 NC_016627.1 PFAM: DNA methylase; adenine specific DNA methylase Mod 4571730 11560691 Clocl_3947 Clostridium clariflavum DSM 19732 adenine specific DNA methylase Mod YP_005048311.1 4570210 R 720554 CDS YP_005048312.1 374298121 11560692 complement(4571833..4572660) 1 NC_016627.1 hypothetical protein 4572660 11560692 Clocl_3948 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048312.1 4571833 R 720554 CDS YP_005048313.1 374298122 11560693 complement(4572756..4573682) 1 NC_016627.1 PFAM: CAAX amino terminal protease family; putative metal-dependent membrane protease 4573682 11560693 Clocl_3949 Clostridium clariflavum DSM 19732 putative metal-dependent membrane protease YP_005048313.1 4572756 R 720554 CDS YP_005048314.1 374298123 11560694 complement(4573707..4574381) 1 NC_016627.1 PFAM: Helix-turn-helix; Peptidase S24-like; putative transcriptional regulator with C-terminal CBS domains 4574381 11560694 Clocl_3950 Clostridium clariflavum DSM 19732 putative transcriptional regulator with C-terminal CBS domains YP_005048314.1 4573707 R 720554 CDS YP_005048315.1 374298124 11560695 complement(4574659..4576401) 1 NC_016627.1 PFAM: HD domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 4576401 11560695 Clocl_3951 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005048315.1 4574659 R 720554 CDS YP_005048316.1 374298125 11560696 4577219..4578409 1 NC_016627.1 PFAM: PAS fold; PAS domain-containing protein 4578409 11560696 Clocl_3952 Clostridium clariflavum DSM 19732 PAS domain-containing protein YP_005048316.1 4577219 D 720554 CDS YP_005048317.1 374298126 11560697 complement(4578499..4582854) 1 NC_016627.1 PFAM: Cellulose binding domain; Polysaccharide deacetylase; manually curated; putative xylanase/chitin deacetylase 4582854 11560697 Clocl_3953 Clostridium clariflavum DSM 19732 putative xylanase/chitin deacetylase YP_005048317.1 4578499 R 720554 CDS YP_005048318.1 374298127 11560698 complement(4583762..4585759) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1565); hypothetical protein 4585759 11560698 Clocl_3954 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048318.1 4583762 R 720554 CDS YP_005048319.1 374298128 11560699 4586715..4587707 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; nucleoside-diphosphate-sugar epimerase 4587707 11560699 Clocl_3955 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048319.1 4586715 D 720554 CDS YP_005048320.1 374298129 11560700 4587737..4588444 1 NC_016627.1 PFAM: Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 4588444 11560700 Clocl_3956 Clostridium clariflavum DSM 19732 Nucleoside-diphosphate-sugar pyrophosphorylase family protein YP_005048320.1 4587737 D 720554 CDS YP_005048321.1 374298130 11560701 4588437..4589348 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 4589348 11560701 Clocl_3957 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048321.1 4588437 D 720554 CDS YP_005048322.1 374298131 11560702 complement(4589441..4590811) 1 NC_016627.1 hypothetical protein 4590811 11560702 Clocl_3958 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048322.1 4589441 R 720554 CDS YP_005048323.1 374298132 11560703 complement(4590818..4592242) 1 NC_016627.1 PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF3492); glycosyltransferase 4592242 11560703 Clocl_3959 Clostridium clariflavum DSM 19732 glycosyltransferase YP_005048323.1 4590818 R 720554 CDS YP_005048324.1 374298133 11560704 complement(4592239..4593159) 1 NC_016627.1 hypothetical protein 4593159 11560704 Clocl_3960 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048324.1 4592239 R 720554 CDS YP_005048325.1 374298134 11560705 complement(4593196..4594941) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 4594941 11560705 Clocl_3961 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048325.1 4593196 R 720554 CDS YP_005048326.1 374298135 11560706 complement(4595244..4596236) 1 NC_016627.1 hypothetical protein 4596236 11560706 Clocl_3962 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048326.1 4595244 R 720554 CDS YP_005048327.1 374298136 11560707 complement(4596229..4597566) 1 NC_016627.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM additional 4Fe4S-binding domain protein 4597566 11560707 Clocl_3963 Clostridium clariflavum DSM 19732 radical SAM additional 4Fe4S-binding domain protein YP_005048327.1 4596229 R 720554 CDS YP_005048328.1 374298137 11560708 complement(4597563..4599263) 1 NC_016627.1 hypothetical protein 4599263 11560708 Clocl_3964 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048328.1 4597563 R 720554 CDS YP_005048329.1 374298138 11560711 complement(4599885..4601252) 1 NC_016627.1 hypothetical protein 4601252 11560711 Clocl_3967 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048329.1 4599885 R 720554 CDS YP_005048330.1 374298139 11560712 complement(4601939..4603780) 1 NC_016627.1 PFAM: Serpin (serine protease inhibitor); Dockerin type I repeat; serine protease inhibitor 4603780 11560712 Clocl_3968 Clostridium clariflavum DSM 19732 serine protease inhibitor YP_005048330.1 4601939 R 720554 CDS YP_005048331.1 374298140 11560713 complement(4603985..4605628) 1 NC_016627.1 PFAM: AMP-binding enzyme; AMP-forming long-chain acyl-CoA synthetase 4605628 11560713 Clocl_3969 Clostridium clariflavum DSM 19732 AMP-forming long-chain acyl-CoA synthetase YP_005048331.1 4603985 R 720554 CDS YP_005048332.1 374298141 11560714 complement(4605779..4608427) 1 NC_016627.1 PFAM: Protein of unknown function (DUF901); Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: small GTP-binding protein domain; small GTP-binding protein domain protein 4608427 11560714 Clocl_3970 Clostridium clariflavum DSM 19732 small GTP-binding protein domain protein YP_005048332.1 4605779 R 720554 CDS YP_005048333.1 374298142 11560715 complement(4608974..4609495) 1 NC_016627.1 PFAM: Macro domain; putative phosphatase, C-terminal domain of histone macro H2A1 like protein 4609495 11560715 Clocl_3971 Clostridium clariflavum DSM 19732 putative phosphatase, C-terminal domain of histone macro H2A1 like protein YP_005048333.1 4608974 R 720554 CDS YP_005048334.1 374298143 11560716 4609721..4609909 1 NC_016627.1 hypothetical protein 4609909 11560716 Clocl_3972 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048334.1 4609721 D 720554 CDS YP_005048335.1 374298144 11560717 4609911..4610528 1 NC_016627.1 PFAM: Fic/DOC family; protein involved in cell division 4610528 11560717 Clocl_3973 Clostridium clariflavum DSM 19732 protein involved in cell division YP_005048335.1 4609911 D 720554 CDS YP_005048336.1 374298145 11560718 complement(4610875..4611300) 1 NC_016627.1 hypothetical protein 4611300 11560718 Clocl_3974 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048336.1 4610875 R 720554 CDS YP_005048337.1 374298146 11560721 complement(4611911..4612555) 1 NC_016627.1 PFAM: Bacterial regulatory proteins, luxR family; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor; RNA polymerase sigma-30 subunit SigH 4612555 11560721 Clocl_3977 Clostridium clariflavum DSM 19732 RNA polymerase sigma-30 subunit SigH YP_005048337.1 4611911 R 720554 CDS YP_005048338.1 374298147 11560722 complement(4613147..4613974) 1 NC_016627.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; rRNA methylase, putative, group 3 4613974 11560722 Clocl_3978 Clostridium clariflavum DSM 19732 rRNA methylase, putative, group 3 YP_005048338.1 4613147 R 720554 CDS YP_005048339.1 374298148 11560723 complement(4614100..4614522) 1 NC_016627.1 PFAM: RNase3 domain; hypothetical protein 4614522 11560723 Clocl_3979 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048339.1 4614100 R 720554 CDS YP_005048340.1 374298149 11560724 complement(4614602..4616005) 1 NC_016627.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 4616005 11560724 Clocl_3980 Clostridium clariflavum DSM 19732 cysteinyl-tRNA synthetase YP_005048340.1 4614602 R 720554 CDS YP_005048341.1 374298150 11560725 complement(4615992..4616729) 1 NC_016627.1 PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase 4616729 11560725 Clocl_3981 Clostridium clariflavum DSM 19732 serine O-acetyltransferase YP_005048341.1 4615992 R 720554 CDS YP_005048342.1 374298151 11560726 4617429..4617791 1 NC_016627.1 PFAM: Membrane protein of unknown function; hypothetical protein 4617791 11560726 Clocl_3982 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048342.1 4617429 D 720554 CDS YP_005048343.1 374298152 11560727 complement(4618453..4619379) 1 NC_016627.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg); 3-methyladenine DNA glycosylase 4619379 11560727 Clocl_3983 Clostridium clariflavum DSM 19732 3-methyladenine DNA glycosylase YP_005048343.1 4618453 R 720554 CDS YP_005048344.1 374298153 11560729 4619482..4620258 1 NC_016627.1 hypothetical protein 4620258 11560729 Clocl_3984 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048344.1 4619482 D 720554 CDS YP_005048345.1 374298154 11560731 complement(4620307..4621146) 1 NC_016627.1 PFAM: Protein of unknown function (DUF322); hypothetical protein 4621146 11560731 Clocl_3985 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048345.1 4620307 R 720554 CDS YP_005048346.1 374298155 11560732 complement(4622023..4622928) 1 NC_016627.1 PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC; putative sporulation protein YtxC 4622928 11560732 Clocl_3986 Clostridium clariflavum DSM 19732 putative sporulation protein YtxC YP_005048346.1 4622023 R 720554 CDS YP_005048347.1 374298156 11560733 complement(4623137..4623889) 1 NC_016627.1 hypothetical protein 4623889 11560733 Clocl_3987 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048347.1 4623137 R 720554 CDS YP_005048348.1 374298157 11560734 4624489..4624632 1 NC_016627.1 hypothetical protein 4624632 11560734 Clocl_3988 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048348.1 4624489 D 720554 CDS YP_005048349.1 374298158 11560735 4624707..4625900 1 NC_016627.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 4625900 11560735 Clocl_3989 Clostridium clariflavum DSM 19732 amidohydrolase YP_005048349.1 4624707 D 720554 CDS YP_005048350.1 374298159 11560736 4626331..4626552 1 NC_016627.1 PFAM: Domain of unknown function (DUF378); hypothetical protein 4626552 11560736 Clocl_3990 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048350.1 4626331 D 720554 CDS YP_005048351.1 374298160 11560737 complement(4626652..4626792) 1 NC_016627.1 hypothetical protein 4626792 11560737 Clocl_3991 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048351.1 4626652 R 720554 CDS YP_005048352.1 374298161 11560738 4627001..4627177 1 NC_016627.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 4627177 11560738 Clocl_3992 Clostridium clariflavum DSM 19732 small, acid-soluble spore protein, alpha/beta type YP_005048352.1 4627001 D 720554 CDS YP_005048353.1 374298162 11560739 4627325..4627516 1 NC_016627.1 hypothetical protein 4627516 11560739 Clocl_3993 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048353.1 4627325 D 720554 CDS YP_005048354.1 374298163 11560740 complement(4627749..4628477) 1 NC_016627.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; DNA-binding regulatory protein, YebC/PmpR family 4628477 11560740 Clocl_3994 Clostridium clariflavum DSM 19732 DNA-binding regulatory protein, YebC/PmpR family YP_005048354.1 4627749 R 720554 CDS YP_005048355.1 374298164 11560741 4628720..4629910 1 NC_016627.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 4629910 11560741 Clocl_3995 Clostridium clariflavum DSM 19732 histidine kinase YP_005048355.1 4628720 D 720554 CDS YP_005048356.1 374298165 11560742 complement(4630142..4630516) 1 NC_016627.1 PFAM: CoA binding domain; putative CoA-binding protein 4630516 11560742 Clocl_3996 Clostridium clariflavum DSM 19732 putative CoA-binding protein YP_005048356.1 4630142 R 720554 CDS YP_005048357.1 374298166 11560743 complement(4630534..4631247) 1 NC_016627.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein 4631247 11560743 Clocl_3997 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048357.1 4630534 R 720554 CDS YP_005048358.1 374298167 11560744 4631356..4631928 1 NC_016627.1 PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 4631928 11560744 Clocl_3998 Clostridium clariflavum DSM 19732 signal peptidase I YP_005048358.1 4631356 D 720554 CDS YP_005048359.1 374298168 11560745 complement(4632183..4632602) 1 NC_016627.1 hypothetical protein 4632602 11560745 Clocl_3999 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048359.1 4632183 R 720554 CDS YP_005048360.1 374298169 11560746 complement(4632763..4634589) 1 NC_016627.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; GTP-binding protein HflX 4634589 11560746 Clocl_4000 Clostridium clariflavum DSM 19732 GTP-binding protein HflX YP_005048360.1 4632763 R 720554 CDS YP_005048361.1 374298170 11560747 complement(4634766..4635002) 1 NC_016627.1 hypothetical protein 4635002 11560747 Clocl_4001 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048361.1 4634766 R 720554 CDS YP_005048362.1 374298171 11560748 complement(4636010..4636507) 1 NC_016627.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); dUTPase 4636507 11560748 Clocl_4002 Clostridium clariflavum DSM 19732 dUTPase YP_005048362.1 4636010 R 720554 CDS YP_005048363.1 374298172 11560749 complement(4636579..4639086) 1 NC_016627.1 PFAM: Collagenase; Peptidase family U32; manually curated; collagenase-like protease 4639086 11560749 Clocl_4003 Clostridium clariflavum DSM 19732 collagenase-like protease YP_005048363.1 4636579 R 720554 CDS YP_005048364.1 374298173 11560750 complement(4639165..4640076) 1 NC_016627.1 PFAM: Metalloenzyme superfamily; putative phosphoglycerate mutase, AP superfamily 4640076 11560750 Clocl_4004 Clostridium clariflavum DSM 19732 putative phosphoglycerate mutase, AP superfamily YP_005048364.1 4639165 R 720554 CDS YP_005048365.1 374298174 11560751 complement(4640446..4640874) 1 NC_016627.1 PFAM: Cell division protein ZapA; hypothetical protein 4640874 11560751 Clocl_4005 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048365.1 4640446 R 720554 CDS YP_005048366.1 374298175 11560752 join(4641253..4642053,4642053..4642643) 1 NC_016627.1 PFAM: Transposase DDE domain; manually curated; transposase family protein 4642643 11560752 Clocl_4006 Clostridium clariflavum DSM 19732 transposase family protein YP_005048366.1 4641253 D 720554 CDS YP_005048367.1 374298176 11560753 complement(4642715..4644901) 1 NC_016627.1 PFAM: Glycosyl hydrolase family 48; Dockerin type I repeat; dockerin-like protein 4644901 11560753 Clocl_4007 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005048367.1 4642715 R 720554 CDS YP_005048368.1 374298177 11560754 complement(4645673..4647115) 1 NC_016627.1 PFAM: Cellulose binding domain; Cellulose binding domain-containing protein 4647115 11560754 Clocl_4008 Clostridium clariflavum DSM 19732 Cellulose binding domain-containing protein YP_005048368.1 4645673 R 720554 CDS YP_005048369.1 374298178 11560755 complement(4647108..4647872) 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor 4647872 11560755 Clocl_4009 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005048369.1 4647108 R 720554 CDS YP_005048370.1 374298179 11560756 4648279..4648479 1 NC_016627.1 PFAM: PspC domain; putative stress-responsive transcriptional regulator 4648479 11560756 Clocl_4010 Clostridium clariflavum DSM 19732 putative stress-responsive transcriptional regulator YP_005048370.1 4648279 D 720554 CDS YP_005048371.1 374298180 11560757 complement(4648723..4649448) 1 NC_016627.1 hypothetical protein 4649448 11560757 Clocl_4011 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048371.1 4648723 R 720554 CDS YP_005048372.1 374298181 11560758 complement(4649607..4650947) 1 NC_016627.1 PFAM: Dockerin type I repeat; Glycosyl hydrolase family 53; arabinogalactan endo-1,4-beta-galactosidase 4650947 11560758 Clocl_4012 Clostridium clariflavum DSM 19732 arabinogalactan endo-1,4-beta-galactosidase YP_005048372.1 4649607 R 720554 CDS YP_005048373.1 374298182 11560759 complement(4651097..4651804) 1 NC_016627.1 PFAM: Uncharacterised protein family UPF0005; FtsH-interacting integral membrane protein 4651804 11560759 Clocl_4013 Clostridium clariflavum DSM 19732 FtsH-interacting integral membrane protein YP_005048373.1 4651097 R 720554 CDS YP_005048374.1 374298183 11560760 complement(4652083..4652487) 1 NC_016627.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; hemerythrin-like metal-binding domain-containing protein 4652487 11560760 Clocl_4014 Clostridium clariflavum DSM 19732 hemerythrin-like metal-binding domain-containing protein YP_005048374.1 4652083 R 720554 CDS YP_005048375.1 374298184 11560761 complement(4652645..4654108) 1 NC_016627.1 manually curated; hypothetical protein 4654108 11560761 Clocl_4015 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048375.1 4652645 R 720554 CDS YP_005048376.1 374298185 11560762 complement(4654305..4655159) 1 NC_016627.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase 4655159 11560762 Clocl_4016 Clostridium clariflavum DSM 19732 dimethyladenosine transferase YP_005048376.1 4654305 R 720554 CDS YP_005048377.1 374298186 11560763 complement(4655431..4656489) 1 NC_016627.1 PFAM: 3D domain; Domain of unknown function (DUF348); G5 domain; hypothetical protein 4656489 11560763 Clocl_4017 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048377.1 4655431 R 720554 CDS YP_005048378.1 374298187 11560764 complement(4656726..4656947) 1 NC_016627.1 hypothetical protein 4656947 11560764 Clocl_4018 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048378.1 4656726 R 720554 CDS YP_005048379.1 374298188 11560765 complement(4657117..4657881) 1 NC_016627.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 4657881 11560765 Clocl_4019 Clostridium clariflavum DSM 19732 TatD family hydrolase YP_005048379.1 4657117 R 720554 CDS YP_005048380.1 374298189 11560766 complement(4657933..4659897) 1 NC_016627.1 PFAM: tRNA synthetases class I (M); Anticodon-binding domain; Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; protein containing C-terminal region/beta chain of methionyl-tRNA synthetase 4659897 11560766 Clocl_4020 Clostridium clariflavum DSM 19732 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase YP_005048380.1 4657933 R 720554 CDS YP_005048381.1 374298190 11560767 complement(4660039..4660572) 1 NC_016627.1 hypothetical protein 4660572 11560767 Clocl_4021 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048381.1 4660039 R 720554 CDS YP_005048382.1 374298191 11560768 complement(4660576..4661142) 1 NC_016627.1 PFAM: Nucleoside recognition; putative membrane protein required for spore maturation 4661142 11560768 Clocl_4022 Clostridium clariflavum DSM 19732 putative membrane protein required for spore maturation YP_005048382.1 4660576 R 720554 CDS YP_005048383.1 374298192 11560769 4661689..4661931 1 NC_016627.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; looped-hinge helix DNA binding domain, AbrB family 4661931 11560769 Clocl_4023 Clostridium clariflavum DSM 19732 looped-hinge helix DNA binding domain, AbrB family YP_005048383.1 4661689 D 720554 CDS YP_005048384.1 374298193 11560770 complement(4662114..4662971) 1 NC_016627.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; putative S-adenosylmethionine-dependent methyltransferase, YraL family 4662971 11560770 Clocl_4024 Clostridium clariflavum DSM 19732 putative S-adenosylmethionine-dependent methyltransferase, YraL family YP_005048384.1 4662114 R 720554 CDS YP_005048385.1 374298194 11560771 complement(4663001..4663750) 1 NC_016627.1 PFAM: Methyltransferase small domain; putative O-methyltransferase 4663750 11560771 Clocl_4025 Clostridium clariflavum DSM 19732 putative O-methyltransferase YP_005048385.1 4663001 R 720554 CDS YP_005048386.1 374298195 11560772 complement(4663854..4664024) 1 NC_016627.1 PFAM: 4Fe-4S binding domain; 4Fe-4S binding protein 4664024 11560772 Clocl_4026 Clostridium clariflavum DSM 19732 4Fe-4S binding protein YP_005048386.1 4663854 R 720554 CDS YP_005048387.1 374298196 11560773 complement(4664324..4665199) 1 NC_016627.1 PFAM: PSP1 C-terminal conserved region; manually curated; putative PSP1-like protein 4665199 11560773 Clocl_4027 Clostridium clariflavum DSM 19732 putative PSP1-like protein YP_005048387.1 4664324 R 720554 CDS YP_005048388.1 374298197 11560774 complement(4665204..4666199) 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau; DNA polymerase III, delta'' subunit 4666199 11560774 Clocl_4028 Clostridium clariflavum DSM 19732 DNA polymerase III, delta'' subunit YP_005048388.1 4665204 R 720554 CDS YP_005048389.1 374298198 11560775 complement(4666208..4666660) 1 NC_016627.1 PFAM: Protein of unknown function (DUF327); hypothetical protein 4666660 11560775 Clocl_4029 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048389.1 4666208 R 720554 CDS YP_005048390.1 374298199 11560776 complement(4666657..4667289) 1 NC_016627.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 4667289 11560776 Clocl_4030 Clostridium clariflavum DSM 19732 thymidylate kinase YP_005048390.1 4666657 R 720554 CDS YP_005048391.1 374298200 11560777 complement(4667374..4668846) 1 NC_016627.1 PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain; arginine/lysine/ornithine decarboxylase 4668846 11560777 Clocl_4031 Clostridium clariflavum DSM 19732 arginine/lysine/ornithine decarboxylase YP_005048391.1 4667374 R 720554 CDS YP_005048392.1 374298201 11560778 complement(4668828..4669010) 1 NC_016627.1 hypothetical protein 4669010 11560778 Clocl_4032 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048392.1 4668828 R 720554 CDS YP_005048393.1 374298202 11560779 complement(4669134..4670039) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; Fe-S protein 4670039 11560779 Clocl_4033 Clostridium clariflavum DSM 19732 Fe-S protein YP_005048393.1 4669134 R 720554 CDS YP_005048394.1 374298203 11560780 complement(4670348..4671532) 1 NC_016627.1 PFAM: Dockerin type I repeat; Putative esterase; enterochelin esterase-like enzyme 4671532 11560780 Clocl_4034 Clostridium clariflavum DSM 19732 enterochelin esterase-like enzyme YP_005048394.1 4670348 R 720554 CDS YP_005048395.1 374298204 11560781 complement(4672030..4674513) 1 NC_016627.1 PFAM: Copper amine oxidase N-terminal domain; Beta propeller domain; secreted protein with C-terminal beta-propeller domain 4674513 11560781 Clocl_4035 Clostridium clariflavum DSM 19732 secreted protein with C-terminal beta-propeller domain YP_005048395.1 4672030 R 720554 CDS YP_005048396.1 374298205 11560782 complement(4674712..4675482) 1 NC_016627.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; pantothenate kinase 4675482 11560782 Clocl_4036 Clostridium clariflavum DSM 19732 pantothenate kinase YP_005048396.1 4674712 R 720554 CDS YP_005048397.1 374298206 11560783 complement(4675522..4675944) 1 NC_016627.1 hypothetical protein 4675944 11560783 Clocl_4037 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048397.1 4675522 R 720554 CDS YP_005048398.1 374298207 11560784 complement(4676150..4676938) 1 NC_016627.1 PFAM: Amidohydrolase; putative TIM-barrel fold metal-dependent hydrolase 4676938 11560784 Clocl_4038 Clostridium clariflavum DSM 19732 putative TIM-barrel fold metal-dependent hydrolase YP_005048398.1 4676150 R 720554 CDS YP_005048399.1 374298208 11560785 complement(4677066..4678067) 1 NC_016627.1 PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin-(acetyl-CoA carboxylase) ligase 4678067 11560785 Clocl_4039 Clostridium clariflavum DSM 19732 biotin-(acetyl-CoA carboxylase) ligase YP_005048399.1 4677066 R 720554 CDS YP_005048400.1 374298209 11560786 complement(4678115..4678726) 1 NC_016627.1 hypothetical protein 4678726 11560786 Clocl_4040 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048400.1 4678115 R 720554 CDS YP_005048401.1 374298210 11560787 complement(4678793..4679317) 1 NC_016627.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 4679317 11560787 Clocl_4041 Clostridium clariflavum DSM 19732 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_005048401.1 4678793 R 720554 CDS YP_005048402.1 374298211 11560788 complement(4679310..4679678) 1 NC_016627.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase 4679678 11560788 Clocl_4042 Clostridium clariflavum DSM 19732 dihydroneopterin aldolase YP_005048402.1 4679310 R 720554 CDS YP_005048403.1 374298212 11560789 complement(4679765..4680946) 1 NC_016627.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; Dihydropteroate synthase 4680946 11560789 Clocl_4043 Clostridium clariflavum DSM 19732 Dihydropteroate synthase YP_005048403.1 4679765 R 720554 CDS YP_005048404.1 374298213 11560790 complement(4680965..4681465) 1 NC_016627.1 TIGRFAM: phosphoesterase, MJ0936 family; phosphoesterase 4681465 11560790 Clocl_4044 Clostridium clariflavum DSM 19732 phosphoesterase YP_005048404.1 4680965 R 720554 CDS YP_005048405.1 374298214 11560791 4681853..4682263 1 NC_016627.1 hypothetical protein 4682263 11560791 Clocl_4045 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048405.1 4681853 D 720554 CDS YP_005048406.1 374298215 11560792 4682292..4682861 1 NC_016627.1 hypothetical protein 4682861 11560792 Clocl_4046 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048406.1 4682292 D 720554 CDS YP_005048407.1 374298216 11560793 complement(4682943..4684085) 1 NC_016627.1 PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 4684085 11560793 Clocl_4047 Clostridium clariflavum DSM 19732 alcohol dehydrogenase YP_005048407.1 4682943 R 720554 CDS YP_005048408.1 374298217 11560794 4684174..4684518 1 NC_016627.1 PFAM: Transcriptional regulator PadR-like family; putative transcriptional regulator 4684518 11560794 Clocl_4048 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048408.1 4684174 D 720554 CDS YP_005048409.1 374298218 11560795 complement(4684582..4685268) 1 NC_016627.1 hypothetical protein 4685268 11560795 Clocl_4049 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048409.1 4684582 R 720554 CDS YP_005048410.1 374298219 11560796 complement(4685675..4687264) 1 NC_016627.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; manually curated; methyl-accepting chemotaxis protein 4687264 11560796 Clocl_4050 Clostridium clariflavum DSM 19732 methyl-accepting chemotaxis protein YP_005048410.1 4685675 R 720554 CDS YP_005048411.1 374298220 11560797 4687832..4689472 1 NC_016627.1 PFAM: DHH family; DRTGG domain; DHHA2 domain; CBS domain; inorganic pyrophosphatase/exopolyphosphatase 4689472 11560797 Clocl_4051 Clostridium clariflavum DSM 19732 inorganic pyrophosphatase/exopolyphosphatase YP_005048411.1 4687832 D 720554 CDS YP_005048412.1 374298221 11560798 complement(4689610..4690173) 1 NC_016627.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 4690173 11560798 Clocl_4052 Clostridium clariflavum DSM 19732 GTP cyclohydrolase I YP_005048412.1 4689610 R 720554 CDS YP_005048413.1 374298222 11560799 complement(4690375..4691619) 1 NC_016627.1 PFAM: Branched-chain amino acid transport system / permease component; ABC-type xylose transport system, permease component 4691619 11560799 Clocl_4053 Clostridium clariflavum DSM 19732 ABC-type xylose transport system, permease component YP_005048413.1 4690375 R 720554 CDS YP_005048414.1 374298223 11560800 complement(4691585..4693147) 1 NC_016627.1 PFAM: ABC transporter; manually curated; sugar ABC transporter ATPase 4693147 11560800 Clocl_4054 Clostridium clariflavum DSM 19732 sugar ABC transporter ATPase YP_005048414.1 4691585 R 720554 CDS YP_005048415.1 374298224 11560801 complement(4693362..4694447) 1 NC_016627.1 PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 4694447 11560801 Clocl_4055 Clostridium clariflavum DSM 19732 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_005048415.1 4693362 R 720554 CDS YP_005048416.1 374298225 11560802 complement(4694832..4697480) 1 NC_016627.1 PFAM: RimK-like ATP-grasp domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase; cyanophycin synthetase 4697480 11560802 Clocl_4056 Clostridium clariflavum DSM 19732 cyanophycin synthetase YP_005048416.1 4694832 R 720554 CDS YP_005048417.1 374298226 11560803 complement(4697575..4698381) 1 NC_016627.1 PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; cyanophycinase 4698381 11560803 Clocl_4057 Clostridium clariflavum DSM 19732 cyanophycinase YP_005048417.1 4697575 R 720554 CDS YP_005048418.1 374298227 11560804 complement(4698496..4698804) 1 NC_016627.1 hypothetical protein 4698804 11560804 Clocl_4058 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048418.1 4698496 R 720554 CDS YP_005048419.1 374298228 11560805 complement(4698818..4699972) 1 NC_016627.1 PFAM: Amidohydrolase family; TIGRFAM: isoaspartyl dipeptidase IadA; isoaspartyl dipeptidase IadA 4699972 11560805 Clocl_4059 Clostridium clariflavum DSM 19732 isoaspartyl dipeptidase IadA YP_005048419.1 4698818 R 720554 CDS YP_005048420.1 374298229 11560806 4700590..4701249 1 NC_016627.1 PFAM: LexA DNA binding domain; SOS response transcriptional repressor, RecA-mediated autopeptidase 4701249 11560806 Clocl_4060 Clostridium clariflavum DSM 19732 SOS response transcriptional repressor, RecA-mediated autopeptidase YP_005048420.1 4700590 D 720554 CDS YP_005048421.1 374298230 11560807 complement(4701393..4702478) 1 NC_016627.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4702478 11560807 Clocl_4061 Clostridium clariflavum DSM 19732 3-isopropylmalate dehydrogenase YP_005048421.1 4701393 R 720554 CDS YP_005048422.1 374298231 11560808 complement(4702657..4703571) 1 NC_016627.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; DNA-binding domain-containing protein 4703571 11560808 Clocl_4062 Clostridium clariflavum DSM 19732 DNA-binding domain-containing protein YP_005048422.1 4702657 R 720554 CDS YP_005048423.1 374298232 11560809 4704044..4704658 1 NC_016627.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated; sigma-70 family RNA polymerase sigma factor 4704658 11560809 Clocl_4063 Clostridium clariflavum DSM 19732 sigma-70 family RNA polymerase sigma factor YP_005048423.1 4704044 D 720554 CDS YP_005048424.1 374298233 11560810 4704621..4705370 1 NC_016627.1 hypothetical protein 4705370 11560810 Clocl_4064 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048424.1 4704621 D 720554 CDS YP_005048425.1 374298234 11560811 complement(4705441..4705950) 1 NC_016627.1 hypothetical protein 4705950 11560811 Clocl_4065 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048425.1 4705441 R 720554 CDS YP_005048426.1 374298235 11560812 4706572..4708653 1 NC_016627.1 PFAM: Thiamine pyrophosphate enzyme, central domain; GAF domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate-dependent protein 4708653 11560812 Clocl_4066 Clostridium clariflavum DSM 19732 thiamine pyrophosphate-dependent protein YP_005048426.1 4706572 D 720554 CDS YP_005048427.1 374298236 11560813 4708916..4709305 1 NC_016627.1 hypothetical protein 4709305 11560813 Clocl_4067 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048427.1 4708916 D 720554 CDS YP_005048428.1 374298237 11560814 complement(4709383..4710012) 1 NC_016627.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein 4710012 11560814 Clocl_4068 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048428.1 4709383 R 720554 CDS YP_005048429.1 374298238 11560815 4710359..4711309 1 NC_016627.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase family protein 4711309 11560815 Clocl_4069 Clostridium clariflavum DSM 19732 alpha/beta hydrolase family protein YP_005048429.1 4710359 D 720554 CDS YP_005048430.1 374298239 11560817 4712015..4713514 1 NC_016627.1 hypothetical protein 4713514 11560817 Clocl_4071 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048430.1 4712015 D 720554 CDS YP_005048431.1 374298240 11560818 complement(4714824..4715315) 1 NC_016627.1 PFAM: FlgN protein; FlgN protein 4715315 11560818 Clocl_4073 Clostridium clariflavum DSM 19732 FlgN protein YP_005048431.1 4714824 R 720554 CDS YP_005048432.1 374298241 11560819 complement(4715327..4715731) 1 NC_016627.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS; flagellar biosynthetic protein FliS 4715731 11560819 Clocl_4074 Clostridium clariflavum DSM 19732 flagellar biosynthetic protein FliS YP_005048432.1 4715327 R 720554 CDS YP_005048433.1 374298242 11560820 complement(4715868..4717769) 1 NC_016627.1 PFAM: Flagellar hook-associated protein 2 C-terminus; manually curated; flagellar capping protein 4717769 11560820 Clocl_4075 Clostridium clariflavum DSM 19732 flagellar capping protein YP_005048433.1 4715868 R 720554 CDS YP_005048434.1 374298243 11560821 complement(4717775..4718173) 1 NC_016627.1 PFAM: FlaG protein; flagellar protein FlaG 4718173 11560821 Clocl_4076 Clostridium clariflavum DSM 19732 flagellar protein FlaG YP_005048434.1 4717775 R 720554 CDS YP_005048435.1 374298244 11560822 complement(4718248..4719192) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 4719192 11560822 Clocl_4077 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048435.1 4718248 R 720554 CDS YP_005048436.1 374298245 11560823 complement(4719266..4720429) 1 NC_016627.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 4720429 11560823 Clocl_4078 Clostridium clariflavum DSM 19732 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase YP_005048436.1 4719266 R 720554 CDS YP_005048437.1 374298246 11560824 complement(4720562..4721626) 1 NC_016627.1 PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG; pseudaminic acid biosynthesis-associated protein PseG 4721626 11560824 Clocl_4079 Clostridium clariflavum DSM 19732 pseudaminic acid biosynthesis-associated protein PseG YP_005048437.1 4720562 R 720554 CDS YP_005048438.1 374298247 11560825 complement(4721636..4722319) 1 NC_016627.1 PFAM: GlcNAc-PI de-N-acetylase; putative LmbE-like protein 4722319 11560825 Clocl_4080 Clostridium clariflavum DSM 19732 putative LmbE-like protein YP_005048438.1 4721636 R 720554 CDS YP_005048439.1 374298248 11560826 complement(4722312..4723037) 1 NC_016627.1 PFAM: Formyl transferase; methionyl-tRNA formyltransferase 4723037 11560826 Clocl_4081 Clostridium clariflavum DSM 19732 methionyl-tRNA formyltransferase YP_005048439.1 4722312 R 720554 CDS YP_005048440.1 374298249 11560827 complement(4723019..4724065) 1 NC_016627.1 PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase; N-acetylneuraminate synthase 4724065 11560827 Clocl_4082 Clostridium clariflavum DSM 19732 N-acetylneuraminate synthase YP_005048440.1 4723019 R 720554 CDS YP_005048441.1 374298250 11560828 complement(4724081..4725736) 1 NC_016627.1 PFAM: NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC; subfamily IIIC HAD-superfamily phosphatase 4725736 11560828 Clocl_4083 Clostridium clariflavum DSM 19732 subfamily IIIC HAD-superfamily phosphatase YP_005048441.1 4724081 R 720554 CDS YP_005048442.1 374298251 11560829 complement(4725790..4726005) 1 NC_016627.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 4726005 11560829 Clocl_4084 Clostridium clariflavum DSM 19732 acyl carrier protein YP_005048442.1 4725790 R 720554 CDS YP_005048443.1 374298252 11560830 complement(4726009..4726689) 1 NC_016627.1 TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase; pseudaminic acid biosynthesis N-acetyl transferase 4726689 11560830 Clocl_4085 Clostridium clariflavum DSM 19732 pseudaminic acid biosynthesis N-acetyl transferase YP_005048443.1 4726009 R 720554 CDS YP_005048444.1 374298253 11560831 complement(4726658..4727368) 1 NC_016627.1 PFAM: Cytidylyltransferase; manually curated; spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase 4727368 11560831 Clocl_4086 Clostridium clariflavum DSM 19732 spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase YP_005048444.1 4726658 R 720554 CDS YP_005048445.1 374298254 11560832 complement(4727454..4728098) 1 NC_016627.1 PFAM: Methyltransferase domain; TIGRFAM: pseudaminic acid biosynthesis-associated methylase; pseudaminic acid biosynthesis-associated methylase 4728098 11560832 Clocl_4087 Clostridium clariflavum DSM 19732 pseudaminic acid biosynthesis-associated methylase YP_005048445.1 4727454 R 720554 CDS YP_005048446.1 374298255 11560833 complement(4728136..4729134) 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase 4729134 11560833 Clocl_4088 Clostridium clariflavum DSM 19732 putative nucleoside-diphosphate sugar epimerase YP_005048446.1 4728136 R 720554 CDS YP_005048447.1 374298256 11560834 complement(4729121..4730536) 1 NC_016627.1 PFAM: Protein of unknown function DUF115; hypothetical protein 4730536 11560834 Clocl_4089 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048447.1 4729121 R 720554 CDS YP_005048448.1 374298257 11560835 complement(4730536..4730901) 1 NC_016627.1 hypothetical protein 4730901 11560835 Clocl_4090 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048448.1 4730536 R 720554 CDS YP_005048449.1 374298258 11560836 complement(4730914..4732788) 1 NC_016627.1 PFAM: Protein of unknown function DUF115; hypothetical protein 4732788 11560836 Clocl_4091 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048449.1 4730914 R 720554 CDS YP_005048450.1 374298259 11560837 complement(4732975..4733787) 1 NC_016627.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein 4733787 11560837 Clocl_4092 Clostridium clariflavum DSM 19732 flagellin/flagellar hook associated protein YP_005048450.1 4732975 R 720554 CDS YP_005048451.1 374298260 11560838 complement(4733828..4734646) 1 NC_016627.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein 4734646 11560838 Clocl_4093 Clostridium clariflavum DSM 19732 flagellin/flagellar hook associated protein YP_005048451.1 4733828 R 720554 CDS YP_005048452.1 374298261 11560839 complement(4734687..4735505) 1 NC_016627.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; flagellin/flagellar hook associated protein 4735505 11560839 Clocl_4094 Clostridium clariflavum DSM 19732 flagellin/flagellar hook associated protein YP_005048452.1 4734687 R 720554 CDS YP_005048453.1 374298262 11560840 complement(4735732..4735947) 1 NC_016627.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA 4735947 11560840 Clocl_4095 Clostridium clariflavum DSM 19732 carbon storage regulator CsrA YP_005048453.1 4735732 R 720554 CDS YP_005048454.1 374298263 11560841 complement(4735919..4736398) 1 NC_016627.1 PFAM: FliW protein; hypothetical protein 4736398 11560841 Clocl_4096 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048454.1 4735919 R 720554 CDS YP_005048455.1 374298264 11560842 complement(4736434..4737015) 1 NC_016627.1 hypothetical protein 4737015 11560842 Clocl_4097 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048455.1 4736434 R 720554 CDS YP_005048456.1 374298265 11560843 complement(4737054..4737962) 1 NC_016627.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3; flagellar hook-associated protein 3 4737962 11560843 Clocl_4098 Clostridium clariflavum DSM 19732 flagellar hook-associated protein 3 YP_005048456.1 4737054 R 720554 CDS YP_005048457.1 374298266 11560844 complement(4737995..4739599) 1 NC_016627.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 4739599 11560844 Clocl_4099 Clostridium clariflavum DSM 19732 flagellar hook-associated protein FlgK YP_005048457.1 4737995 R 720554 CDS YP_005048458.1 374298267 11560845 complement(4739606..4741651) 1 NC_016627.1 PFAM: von Willebrand factor type A domain; Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 4741651 11560845 Clocl_4100 Clostridium clariflavum DSM 19732 flagellar hook-associated protein FlgK YP_005048458.1 4739606 R 720554 CDS YP_005048459.1 374298268 11560846 complement(4741707..4742213) 1 NC_016627.1 PFAM: FlgN protein; FlgN protein 4742213 11560846 Clocl_4101 Clostridium clariflavum DSM 19732 FlgN protein YP_005048459.1 4741707 R 720554 CDS YP_005048460.1 374298269 11560847 complement(4742294..4742581) 1 NC_016627.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; flagellar biosynthesis anti-sigma factor FlgM 4742581 11560847 Clocl_4102 Clostridium clariflavum DSM 19732 flagellar biosynthesis anti-sigma factor FlgM YP_005048460.1 4742294 R 720554 CDS YP_005048461.1 374298270 11560848 complement(4742818..4743240) 1 NC_016627.1 TIGRFAM: flagellar operon protein TIGR03826; hypothetical protein 4743240 11560848 Clocl_4103 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048461.1 4742818 R 720554 CDS YP_005048462.1 374298271 11560849 complement(4743311..4743976) 1 NC_016627.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; putative amidophosphoribosyltransferase 4743976 11560849 Clocl_4104 Clostridium clariflavum DSM 19732 putative amidophosphoribosyltransferase YP_005048462.1 4743311 R 720554 CDS YP_005048463.1 374298272 11560850 complement(4744042..4744872) 1 NC_016627.1 PFAM: Mechanosensitive ion channel; small-conductance mechanosensitive channel 4744872 11560850 Clocl_4105 Clostridium clariflavum DSM 19732 small-conductance mechanosensitive channel YP_005048463.1 4744042 R 720554 CDS YP_005048464.1 374298273 11560851 complement(4745216..4745338) 1 NC_016627.1 hypothetical protein 4745338 11560851 Clocl_4106 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048464.1 4745216 R 720554 CDS YP_005048465.1 374298274 11560852 complement(4745421..4746287) 1 NC_016627.1 hypothetical protein 4746287 11560852 Clocl_4107 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048465.1 4745421 R 720554 CDS YP_005048466.1 374298275 11560853 complement(4746382..4747107) 1 NC_016627.1 PFAM: Peptidase C26; putative glutamine amidotransferase 4747107 11560853 Clocl_4108 Clostridium clariflavum DSM 19732 putative glutamine amidotransferase YP_005048466.1 4746382 R 720554 CDS YP_005048467.1 374298276 11560854 complement(4747241..4747576) 1 NC_016627.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor 4747576 11560854 Clocl_4109 Clostridium clariflavum DSM 19732 anti-anti-sigma factor YP_005048467.1 4747241 R 720554 CDS YP_005048468.1 374298277 11560855 4747960..4748100 1 NC_016627.1 hypothetical protein 4748100 11560855 Clocl_4110 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048468.1 4747960 D 720554 CDS YP_005048469.1 374298278 11560856 complement(4748212..4748370) 1 NC_016627.1 PFAM: Rubredoxin; rubredoxin 4748370 11560856 Clocl_4111 Clostridium clariflavum DSM 19732 rubredoxin YP_005048469.1 4748212 R 720554 CDS YP_005048470.1 374298279 11560857 complement(4748860..4749315) 1 NC_016627.1 PFAM: Transposase IS200 like; transposase 4749315 11560857 Clocl_4112 Clostridium clariflavum DSM 19732 transposase YP_005048470.1 4748860 R 720554 CDS YP_005048471.1 374298280 11560858 complement(4749524..4750129) 1 NC_016627.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC; putative sporulation protein YyaC 4750129 11560858 Clocl_4113 Clostridium clariflavum DSM 19732 putative sporulation protein YyaC YP_005048471.1 4749524 R 720554 CDS YP_005048472.1 374298281 11560859 4750366..4751460 1 NC_016627.1 PFAM: Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box; manually curated; PAS domain S-box 4751460 11560859 Clocl_4114 Clostridium clariflavum DSM 19732 PAS domain S-box YP_005048472.1 4750366 D 720554 CDS YP_005048473.1 374298282 11560860 4752462..4753568 1 NC_016627.1 manually curated; hypothetical protein 4753568 11560860 Clocl_4115 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048473.1 4752462 D 720554 CDS YP_005048474.1 374298283 11560861 complement(4753705..4753914) 1 NC_016627.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31P 4753914 11560861 Clocl_4116 Clostridium clariflavum DSM 19732 50S ribosomal protein L31P YP_005048474.1 4753705 R 720554 CDS YP_005048475.1 374298284 11560862 complement(4754046..4755983) 1 NC_016627.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; manually curated; transcription termination factor Rho 4755983 11560862 Clocl_4117 Clostridium clariflavum DSM 19732 transcription termination factor Rho YP_005048475.1 4754046 R 720554 CDS YP_005048476.1 374298285 11560863 complement(4756433..4757092) 1 NC_016627.1 hypothetical protein 4757092 11560863 Clocl_4118 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048476.1 4756433 R 720554 CDS YP_005048477.1 374298286 11560866 complement(4758030..4758812) 1 NC_016627.1 PFAM: ABC transporter; ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component 4758812 11560866 Clocl_4121 Clostridium clariflavum DSM 19732 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component YP_005048477.1 4758030 R 720554 CDS YP_005048478.1 374298287 11560867 complement(4758820..4759833) 1 NC_016627.1 PFAM: FecCD transport family; Fe3+-siderophore ABC transporter permease 4759833 11560867 Clocl_4122 Clostridium clariflavum DSM 19732 Fe3+-siderophore ABC transporter permease YP_005048478.1 4758820 R 720554 CDS YP_005048479.1 374298288 11560868 complement(4759850..4760812) 1 NC_016627.1 PFAM: Periplasmic binding protein; Fe3+-hydroxamate ABC transporter periplasmic protein 4760812 11560868 Clocl_4123 Clostridium clariflavum DSM 19732 Fe3+-hydroxamate ABC transporter periplasmic protein YP_005048479.1 4759850 R 720554 CDS YP_005048480.1 374298289 11560869 4761582..4763525 1 NC_016627.1 PFAM: Dockerin type I repeat; CotH protein; manually curated; dockerin-like protein 4763525 11560869 Clocl_4124 Clostridium clariflavum DSM 19732 dockerin-like protein YP_005048480.1 4761582 D 720554 CDS YP_005048481.1 374298290 11560871 4764143..4764856 1 NC_016627.1 PFAM: PP-loop family; putative ATPase of the PP-loop superfamily implicated in cell cycle control 4764856 11560871 Clocl_4126 Clostridium clariflavum DSM 19732 putative ATPase of the PP-loop superfamily implicated in cell cycle control YP_005048481.1 4764143 D 720554 CDS YP_005048482.1 374298291 11560872 4764931..4767777 1 NC_016627.1 PFAM: Predicted periplasmic protein (DUF2233); hypothetical protein 4767777 11560872 Clocl_4127 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048482.1 4764931 D 720554 CDS YP_005048483.1 374298292 11560874 complement(4768490..4769035) 1 NC_016627.1 hypothetical protein 4769035 11560874 Clocl_4128 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048483.1 4768490 R 720554 CDS YP_005048484.1 374298293 11560876 complement(4769017..4769268) 1 NC_016627.1 hypothetical protein 4769268 11560876 Clocl_4129 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048484.1 4769017 R 720554 CDS YP_005048485.1 374298294 11560877 complement(4769491..4770363) 1 NC_016627.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase 4770363 11560877 Clocl_4130 Clostridium clariflavum DSM 19732 UDP-glucose pyrophosphorylase YP_005048485.1 4769491 R 720554 CDS YP_005048486.1 374298295 11560878 4770733..4771602 1 NC_016627.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); hypothetical protein 4771602 11560878 Clocl_4131 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048486.1 4770733 D 720554 CDS YP_005048487.1 374298296 11560879 complement(4771692..4771979) 1 NC_016627.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 4771979 11560879 Clocl_4132 Clostridium clariflavum DSM 19732 30S ribosomal protein S18 YP_005048487.1 4771692 R 720554 CDS YP_005048488.1 374298297 11560880 complement(4772041..4772451) 1 NC_016627.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single stranded DNA-binding protein 4772451 11560880 Clocl_4133 Clostridium clariflavum DSM 19732 single stranded DNA-binding protein YP_005048488.1 4772041 R 720554 CDS YP_005048489.1 374298298 11560882 complement(4772461..4772748) 1 NC_016627.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 4772748 11560882 Clocl_4134 Clostridium clariflavum DSM 19732 30S ribosomal protein S6 YP_005048489.1 4772461 R 720554 CDS YP_005048490.1 374298299 11560883 4773216..4774478 1 NC_016627.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase domain-containing protein 4774478 11560883 Clocl_4135 Clostridium clariflavum DSM 19732 diguanylate cyclase domain-containing protein YP_005048490.1 4773216 D 720554 CDS YP_005048491.1 374298300 11560884 complement(4774657..4775859) 1 NC_016627.1 manually curated; hypothetical protein 4775859 11560884 Clocl_4136 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048491.1 4774657 R 720554 CDS YP_005048492.1 374298301 11560885 complement(4775864..4776568) 1 NC_016627.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-I factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-I factor 4776568 11560885 Clocl_4137 Clostridium clariflavum DSM 19732 RNA polymerase sigma-I factor YP_005048492.1 4775864 R 720554 CDS YP_005048493.1 374298302 11560886 4776909..4777778 1 NC_016627.1 PFAM: Domain of unknown function (DUF368); hypothetical protein 4777778 11560886 Clocl_4138 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048493.1 4776909 D 720554 CDS YP_005048494.1 374298303 11560887 complement(4777894..4778154) 1 NC_016627.1 hypothetical protein 4778154 11560887 Clocl_4139 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048494.1 4777894 R 720554 CDS YP_005048495.1 374298304 11560888 complement(4778233..4779807) 1 NC_016627.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; 2-isopropylmalate synthase 4779807 11560888 Clocl_4140 Clostridium clariflavum DSM 19732 2-isopropylmalate synthase YP_005048495.1 4778233 R 720554 CDS YP_005048496.1 374298305 11560889 complement(4779890..4781413) 1 NC_016627.1 PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 4781413 11560889 Clocl_4141 Clostridium clariflavum DSM 19732 2-isopropylmalate synthase YP_005048496.1 4779890 R 720554 CDS YP_005048497.1 374298306 11560890 complement(4781606..4782601) 1 NC_016627.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 4782601 11560890 Clocl_4142 Clostridium clariflavum DSM 19732 ketol-acid reductoisomerase YP_005048497.1 4781606 R 720554 CDS YP_005048498.1 374298307 11560891 complement(4782610..4783122) 1 NC_016627.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit 4783122 11560891 Clocl_4143 Clostridium clariflavum DSM 19732 acetolactate synthase small subunit YP_005048498.1 4782610 R 720554 CDS YP_005048499.1 374298308 11560892 complement(4783191..4784819) 1 NC_016627.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase, large subunit 4784819 11560892 Clocl_4144 Clostridium clariflavum DSM 19732 acetolactate synthase, large subunit YP_005048499.1 4783191 R 720554 CDS YP_005048500.1 374298309 11560893 complement(4784969..4785184) 1 NC_016627.1 hypothetical protein 4785184 11560893 Clocl_4145 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048500.1 4784969 R 720554 CDS YP_005048501.1 374298310 11560894 complement(4785327..4786760) 1 NC_016627.1 PFAM: Mannosyltransferase (PIG-V)); putative integral membrane protein 4786760 11560894 Clocl_4146 Clostridium clariflavum DSM 19732 putative integral membrane protein YP_005048501.1 4785327 R 720554 CDS YP_005048502.1 374298311 11560895 complement(4787011..4787484) 1 NC_016627.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cytosine/adenosine deaminase 4787484 11560895 Clocl_4147 Clostridium clariflavum DSM 19732 cytosine/adenosine deaminase YP_005048502.1 4787011 R 720554 CDS YP_005048503.1 374298312 11560896 complement(4787733..4788953) 1 NC_016627.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); trypsin-like serine protease with C-terminal PDZ domain 4788953 11560896 Clocl_4148 Clostridium clariflavum DSM 19732 trypsin-like serine protease with C-terminal PDZ domain YP_005048503.1 4787733 R 720554 CDS YP_005048504.1 374298313 11560897 complement(4789168..4789365) 1 NC_016627.1 PFAM: Bacterial protein of unknown function (DUF951); hypothetical protein 4789365 11560897 Clocl_4149 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048504.1 4789168 R 720554 CDS YP_005048505.1 374298314 11560898 4789576..4790847 1 NC_016627.1 PFAM: Putative peptidoglycan binding domain; Zinc carboxypeptidase; LysM domain; gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I 4790847 11560898 Clocl_4150 Clostridium clariflavum DSM 19732 gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I YP_005048505.1 4789576 D 720554 CDS YP_005048506.1 374298315 11560899 4791112..4791516 1 NC_016627.1 hypothetical protein 4791516 11560899 Clocl_4151 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048506.1 4791112 D 720554 CDS YP_005048507.1 374298316 11560900 4791517..4791720 1 NC_016627.1 PFAM: Helix-turn-helix; putative transcriptional regulator 4791720 11560900 Clocl_4152 Clostridium clariflavum DSM 19732 putative transcriptional regulator YP_005048507.1 4791517 D 720554 CDS YP_005048508.1 374298317 11560901 complement(4791884..4793848) 1 NC_016627.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III 4793848 11560901 Clocl_4153 Clostridium clariflavum DSM 19732 DNA topoisomerase III YP_005048508.1 4791884 R 720554 CDS YP_005048509.1 374298318 11560902 complement(4794034..4794852) 1 NC_016627.1 PFAM: YabG peptidase U57; TIGRFAM: sporulation peptidase YabG; sporulation peptidase YabG 4794852 11560902 Clocl_4154 Clostridium clariflavum DSM 19732 sporulation peptidase YabG YP_005048509.1 4794034 R 720554 CDS YP_005048510.1 374298319 11560903 complement(4795015..4797372) 1 NC_016627.1 PFAM: Transglutaminase-like superfamily; manually curated; transglutaminase 4797372 11560903 Clocl_4155 Clostridium clariflavum DSM 19732 transglutaminase YP_005048510.1 4795015 R 720554 CDS YP_005048511.1 374298320 11560904 complement(4797408..4798658) 1 NC_016627.1 PFAM: Protein of unknown function DUF58; hypothetical protein 4798658 11560904 Clocl_4156 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048511.1 4797408 R 720554 CDS YP_005048512.1 374298321 11560905 complement(4798944..4799873) 1 NC_016627.1 PFAM: ATPase family associated with various cellular activities (AAA); MoxR-like ATPase 4799873 11560905 Clocl_4157 Clostridium clariflavum DSM 19732 MoxR-like ATPase YP_005048512.1 4798944 R 720554 CDS YP_005048513.1 374298322 11560906 complement(4800276..4802522) 1 NC_016627.1 PFAM: Cellulose binding domain; Cohesin domain; manually curated; cellobiohydrolase A (1,4-beta-cellobiosidase A) 4802522 11560906 Clocl_4158 Clostridium clariflavum DSM 19732 cellobiohydrolase A (1,4-beta-cellobiosidase A) YP_005048513.1 4800276 R 720554 CDS YP_005048514.1 374298323 11560907 complement(4803183..4803815) 1 NC_016627.1 PFAM: Polysaccharide deacetylase; putative xylanase/chitin deacetylase 4803815 11560907 Clocl_4159 Clostridium clariflavum DSM 19732 putative xylanase/chitin deacetylase YP_005048514.1 4803183 R 720554 CDS YP_005048515.1 374298324 11560908 4804088..4805479 1 NC_016627.1 PFAM: Transposase DDE domain; transposase family protein 4805479 11560908 Clocl_4160 Clostridium clariflavum DSM 19732 transposase family protein YP_005048515.1 4804088 D 720554 CDS YP_005048516.1 374298325 11560909 complement(4805735..4808224) 1 NC_016627.1 PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); CBM6-containing protein,dockerin-like protein 4808224 11560909 Clocl_4161 Clostridium clariflavum DSM 19732 CBM6-containing protein,dockerin-like protein YP_005048516.1 4805735 R 720554 CDS YP_005048517.1 374298326 11560910 4808747..4809445 1 NC_016627.1 PFAM: RDD family; putative membrane protein/domain protein 4809445 11560910 Clocl_4162 Clostridium clariflavum DSM 19732 putative membrane protein/domain protein YP_005048517.1 4808747 D 720554 CDS YP_005048518.1 374298327 11560911 4809601..4810350 1 NC_016627.1 PFAM: RDD family; hypothetical protein 4810350 11560911 Clocl_4163 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048518.1 4809601 D 720554 CDS YP_005048519.1 374298328 11560913 complement(4811225..4811608) 1 NC_016627.1 hypothetical protein 4811608 11560913 Clocl_4165 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048519.1 4811225 R 720554 CDS YP_005048520.1 374298329 11560914 complement(4811629..4812399) 1 NC_016627.1 PFAM: Protein of unknown function (DUF3298); valyl-tRNA synthetase 4812399 11560914 Clocl_4166 Clostridium clariflavum DSM 19732 valyl-tRNA synthetase YP_005048520.1 4811629 R 720554 CDS YP_005048521.1 374298330 11560915 4812869..4813900 1 NC_016627.1 PFAM: Bacterial regulatory proteins, lacI family; family; transcriptional regulator 4813900 11560915 Clocl_4167 Clostridium clariflavum DSM 19732 transcriptional regulator YP_005048521.1 4812869 D 720554 CDS YP_005048522.1 374298331 11560916 complement(4813931..4814410) 1 NC_016627.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; rRNA large subunit m3Psi methyltransferase RlmH 4814410 11560916 Clocl_4168 Clostridium clariflavum DSM 19732 rRNA large subunit m3Psi methyltransferase RlmH YP_005048522.1 4813931 R 720554 CDS YP_005048523.1 374298332 11560917 complement(4814419..4815210) 1 NC_016627.1 PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase, beta-lactamase superfamily I 4815210 11560917 Clocl_4169 Clostridium clariflavum DSM 19732 metal-dependent hydrolase, beta-lactamase superfamily I YP_005048523.1 4814419 R 720554 CDS YP_005048524.1 374298333 11560918 complement(4815340..4816599) 1 NC_016627.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4816599 11560918 Clocl_4170 Clostridium clariflavum DSM 19732 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005048524.1 4815340 R 720554 CDS YP_005048525.1 374298334 11560919 complement(4816704..4817555) 1 NC_016627.1 PFAM: YycH protein; hypothetical protein 4817555 11560919 Clocl_4171 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048525.1 4816704 R 720554 CDS YP_005048526.1 374298335 11560920 complement(4817558..4819018) 1 NC_016627.1 hypothetical protein 4819018 11560920 Clocl_4172 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048526.1 4817558 R 720554 CDS YP_005048527.1 374298336 11560922 complement(4819045..4819587) 1 NC_016627.1 hypothetical protein 4819587 11560922 Clocl_4173 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048527.1 4819045 R 720554 CDS YP_005048528.1 374298337 11560923 complement(4819693..4821516) 1 NC_016627.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; signal transduction histidine kinase 4821516 11560923 Clocl_4174 Clostridium clariflavum DSM 19732 signal transduction histidine kinase YP_005048528.1 4819693 R 720554 CDS YP_005048529.1 374298338 11560924 complement(4821615..4822307) 1 NC_016627.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 4822307 11560924 Clocl_4175 Clostridium clariflavum DSM 19732 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain YP_005048529.1 4821615 R 720554 CDS YP_005048530.1 374298339 11560925 4822612..4822830 1 NC_016627.1 hypothetical protein 4822830 11560925 Clocl_4176 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048530.1 4822612 D 720554 CDS YP_005048531.1 374298340 11560927 complement(4824628..4825455) 1 NC_016627.1 PFAM: Cytidylyltransferase; CMP-N-acetylneuraminic acid synthetase 4825455 11560927 Clocl_4178 Clostridium clariflavum DSM 19732 CMP-N-acetylneuraminic acid synthetase YP_005048531.1 4824628 R 720554 CDS YP_005048532.1 374298341 11560928 complement(4825876..4827045) 1 NC_016627.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; UDP-N-acetyl-D-glucosamine 2-epimerase 4827045 11560928 Clocl_4179 Clostridium clariflavum DSM 19732 UDP-N-acetyl-D-glucosamine 2-epimerase YP_005048532.1 4825876 R 720554 CDS YP_005048533.1 374298342 11560929 complement(4827042..4828037) 1 NC_016627.1 PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase; N-acetylneuraminate synthase 4828037 11560929 Clocl_4180 Clostridium clariflavum DSM 19732 N-acetylneuraminate synthase YP_005048533.1 4827042 R 720554 CDS YP_005048534.1 374298343 11560930 complement(4828034..4828678) 1 NC_016627.1 TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; hypothetical protein 4828678 11560930 Clocl_4181 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048534.1 4828034 R 720554 CDS YP_005048535.1 374298344 11560931 complement(4828671..4829717) 1 NC_016627.1 PFAM: Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase family protein 4829717 11560931 Clocl_4182 Clostridium clariflavum DSM 19732 Nucleoside-diphosphate-sugar pyrophosphorylase family protein YP_005048535.1 4828671 R 720554 CDS YP_005048536.1 374298345 11560932 complement(4829742..4830914) 1 NC_016627.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; putative PLP-dependent enzyme possibly involved in cell wall biogenesis 4830914 11560932 Clocl_4183 Clostridium clariflavum DSM 19732 putative PLP-dependent enzyme possibly involved in cell wall biogenesis YP_005048536.1 4829742 R 720554 CDS YP_005048537.1 374298346 11560933 complement(4831197..4832177) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 4832177 11560933 Clocl_4184 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048537.1 4831197 R 720554 CDS YP_005048538.1 374298347 11560934 complement(4832607..4834451) 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; putative nucleoside-diphosphate sugar epimerase 4834451 11560934 Clocl_4185 Clostridium clariflavum DSM 19732 putative nucleoside-diphosphate sugar epimerase YP_005048538.1 4832607 R 720554 CDS YP_005048539.1 374298348 11560935 complement(4835230..4836675) 1 NC_016627.1 PFAM: Polysaccharide biosynthesis protein; manually curated; membrane protein involved in the export of O-antigen and teichoic acid 4836675 11560935 Clocl_4186 Clostridium clariflavum DSM 19732 membrane protein involved in the export of O-antigen and teichoic acid YP_005048539.1 4835230 R 720554 CDS YP_005048540.1 374298349 11560936 complement(4836677..4838053) 1 NC_016627.1 PFAM: Capsule polysaccharide biosynthesis protein; capsular polysaccharide biosynthesis protein 4838053 11560936 Clocl_4187 Clostridium clariflavum DSM 19732 capsular polysaccharide biosynthesis protein YP_005048540.1 4836677 R 720554 CDS YP_005048541.1 374298350 11560937 complement(4838548..4839831) 1 NC_016627.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; transposase 4839831 11560937 Clocl_4188 Clostridium clariflavum DSM 19732 transposase YP_005048541.1 4838548 R 720554 CDS YP_005048542.1 374298351 11560940 complement(4841187..4842218) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 4842218 11560940 Clocl_4191 Clostridium clariflavum DSM 19732 dTDP-glucose 4,6-dehydratase YP_005048542.1 4841187 R 720554 CDS YP_005048543.1 374298352 11560941 complement(4842385..4843335) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 4843335 11560941 Clocl_4192 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005048543.1 4842385 R 720554 CDS YP_005048544.1 374298353 11560942 complement(4843366..4844685) 1 NC_016627.1 hypothetical protein 4844685 11560942 Clocl_4193 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048544.1 4843366 R 720554 CDS YP_005048545.1 374298354 11560943 complement(4844688..4845500) 1 NC_016627.1 PFAM: Glycosyl transferase family 2; manually curated; glycosyl transferase family protein 4845500 11560943 Clocl_4194 Clostridium clariflavum DSM 19732 glycosyl transferase family protein YP_005048545.1 4844688 R 720554 CDS YP_005048546.1 374298355 11560944 complement(4845670..4846674) 1 NC_016627.1 manually curated; hypothetical protein 4846674 11560944 Clocl_4195 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048546.1 4845670 R 720554 CDS YP_005048547.1 374298356 11560945 complement(4846671..4847801) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; manually curated; nucleoside-diphosphate-sugar epimerase 4847801 11560945 Clocl_4196 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048547.1 4846671 R 720554 CDS YP_005048548.1 374298357 11560946 complement(4847813..4848640) 1 NC_016627.1 PFAM: NAD dependent epimerase/dehydratase family; nucleoside-diphosphate-sugar epimerase 4848640 11560946 Clocl_4197 Clostridium clariflavum DSM 19732 nucleoside-diphosphate-sugar epimerase YP_005048548.1 4847813 R 720554 CDS YP_005048549.1 374298358 11560947 complement(4848637..4849278) 1 NC_016627.1 PFAM: Bacterial sugar transferase; glycosyl transferase 4849278 11560947 Clocl_4198 Clostridium clariflavum DSM 19732 glycosyl transferase YP_005048549.1 4848637 R 720554 CDS YP_005048550.1 374298359 11560948 complement(4849335..4852418) 1 NC_016627.1 PFAM: O-Antigen ligase; manually curated; putative membrane protein, required for N-linked glycosylation 4852418 11560948 Clocl_4199 Clostridium clariflavum DSM 19732 putative membrane protein, required for N-linked glycosylation YP_005048550.1 4849335 R 720554 CDS YP_005048551.1 374298360 11560949 complement(4852500..4853015) 1 NC_016627.1 hypothetical protein 4853015 11560949 Clocl_4200 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048551.1 4852500 R 720554 CDS YP_005048552.1 374298361 11560950 complement(4853053..4854324) 1 NC_016627.1 PFAM: Chain length determinant protein; exopolysaccharide biosynthesis protein 4854324 11560950 Clocl_4201 Clostridium clariflavum DSM 19732 exopolysaccharide biosynthesis protein YP_005048552.1 4853053 R 720554 CDS YP_005048553.1 374298362 11560951 complement(4854508..4857624) 1 NC_016627.1 PFAM: S-layer homology domain; Bacterial Ig-like domain (group 4); Ig-like domain-containing protein,putative S-layer protein 4857624 11560951 Clocl_4202 Clostridium clariflavum DSM 19732 Ig-like domain-containing protein,putative S-layer protein YP_005048553.1 4854508 R 720554 CDS YP_005048554.1 374298363 11560952 complement(4857760..4860915) 1 NC_016627.1 PFAM: S-layer homology domain; Bacterial Ig-like domain (group 4); Ig-like domain-containing protein,putative S-layer protein 4860915 11560952 Clocl_4203 Clostridium clariflavum DSM 19732 Ig-like domain-containing protein,putative S-layer protein YP_005048554.1 4857760 R 720554 CDS YP_005048555.1 374298364 11560953 complement(4861418..4861594) 1 NC_016627.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type; small, acid-soluble spore protein, alpha/beta type 4861594 11560953 Clocl_4204 Clostridium clariflavum DSM 19732 small, acid-soluble spore protein, alpha/beta type YP_005048555.1 4861418 R 720554 CDS YP_005048556.1 374298365 11560954 4861793..4862236 1 NC_016627.1 PFAM: Cell Wall Hydrolase; Cell Wall Hydrolase 4862236 11560954 Clocl_4205 Clostridium clariflavum DSM 19732 Cell Wall Hydrolase YP_005048556.1 4861793 D 720554 CDS YP_005048557.1 374298366 11560955 4862269..4862721 1 NC_016627.1 hypothetical protein 4862721 11560955 Clocl_4206 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048557.1 4862269 D 720554 CDS YP_005048558.1 374298367 11560956 complement(4862813..4863232) 1 NC_016627.1 PFAM: CBS domain; putative signal-transduction protein containing cAMP-binding and CBS domains 4863232 11560956 Clocl_4207 Clostridium clariflavum DSM 19732 putative signal-transduction protein containing cAMP-binding and CBS domains YP_005048558.1 4862813 R 720554 CDS YP_005048559.1 374298368 11560957 4863603..4864745 1 NC_016627.1 PFAM: PGAP1-like protein; manually curated; alpha/beta hydrolase 4864745 11560957 Clocl_4208 Clostridium clariflavum DSM 19732 alpha/beta hydrolase YP_005048559.1 4863603 D 720554 CDS YP_005048560.1 374298369 11560959 complement(4866678..4867319) 1 NC_016627.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Retron-type reverse transcriptase 4867319 11560959 Clocl_4210 Clostridium clariflavum DSM 19732 Retron-type reverse transcriptase YP_005048560.1 4866678 R 720554 CDS YP_005048561.1 374298370 11560960 complement(4868075..4871878) 1 NC_016627.1 PFAM: Cellulose binding domain; Cohesin domain; manually curated; cellobiohydrolase A (1,4-beta-cellobiosidase A) 4871878 11560960 Clocl_4211 Clostridium clariflavum DSM 19732 cellobiohydrolase A (1,4-beta-cellobiosidase A) YP_005048561.1 4868075 R 720554 CDS YP_005048562.1 374298371 11560961 complement(4871875..4874880) 1 NC_016627.1 PFAM: Cellulose binding domain; Cohesin domain; cellobiohydrolase A (1,4-beta-cellobiosidase A) 4874880 11560961 Clocl_4212 Clostridium clariflavum DSM 19732 cellobiohydrolase A (1,4-beta-cellobiosidase A) YP_005048562.1 4871875 R 720554 CDS YP_005048563.1 374298372 11560962 complement(4875640..4876473) 1 NC_016627.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 4876473 11560962 Clocl_4213 Clostridium clariflavum DSM 19732 nicotinate-nucleotide pyrophosphorylase YP_005048563.1 4875640 R 720554 CDS YP_005048564.1 374298373 11560963 complement(4876606..4878213) 1 NC_016627.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 4878213 11560963 Clocl_4214 Clostridium clariflavum DSM 19732 L-aspartate oxidase YP_005048564.1 4876606 R 720554 CDS YP_005048565.1 374298374 11560964 complement(4878403..4879314) 1 NC_016627.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase 4879314 11560964 Clocl_4215 Clostridium clariflavum DSM 19732 quinolinate synthetase YP_005048565.1 4878403 R 720554 CDS YP_005048566.1 374298375 11560965 complement(4879612..4880256) 1 NC_016627.1 PFAM: Accessory gene regulator B; protein possibly involved in post-translational modification of quorum-sensing peptides 4880256 11560965 Clocl_4216 Clostridium clariflavum DSM 19732 protein possibly involved in post-translational modification of quorum-sensing peptides YP_005048566.1 4879612 R 720554 CDS YP_005048567.1 374298376 11560970 complement(4886988..4889513) 1 NC_016627.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A 4889513 11560970 Clocl_4221 Clostridium clariflavum DSM 19732 DNA gyrase subunit A YP_005048567.1 4886988 R 720554 CDS YP_005048568.1 374298377 11560971 complement(4889806..4890639) 1 NC_016627.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; ParB-like partition protein 4890639 11560971 Clocl_4222 Clostridium clariflavum DSM 19732 ParB-like partition protein YP_005048568.1 4889806 R 720554 CDS YP_005048569.1 374298378 11560972 complement(4890850..4891572) 1 NC_016627.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; 16S rRNA m(7)G-527 methyltransferase 4891572 11560972 Clocl_4223 Clostridium clariflavum DSM 19732 16S rRNA m(7)G-527 methyltransferase YP_005048569.1 4890850 R 720554 CDS YP_005048570.1 374298379 11560973 complement(4891676..4893574) 1 NC_016627.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose-inhibited division protein A 4893574 11560973 Clocl_4224 Clostridium clariflavum DSM 19732 glucose-inhibited division protein A YP_005048570.1 4891676 R 720554 CDS YP_005048571.1 374298380 11560974 complement(4893585..4894967) 1 NC_016627.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; tRNA modification GTPase trmE 4894967 11560974 Clocl_4225 Clostridium clariflavum DSM 19732 tRNA modification GTPase trmE YP_005048571.1 4893585 R 720554 CDS YP_005048572.1 374298381 11560976 complement(4895160..4895780) 1 NC_016627.1 PFAM: R3H domain; putative RNA-binding protein 4895780 11560976 Clocl_4226 Clostridium clariflavum DSM 19732 putative RNA-binding protein YP_005048572.1 4895160 R 720554 CDS YP_005048573.1 374298382 11560978 complement(4895781..4896626) 1 NC_016627.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; manually curated; preprotein translocase subunit YidC 4896626 11560978 Clocl_4227 Clostridium clariflavum DSM 19732 preprotein translocase subunit YidC YP_005048573.1 4895781 R 720554 CDS YP_005048574.1 374298383 11560980 complement(4896669..4896884) 1 NC_016627.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein 4896884 11560980 Clocl_4228 Clostridium clariflavum DSM 19732 hypothetical protein YP_005048574.1 4896669 R 720554 CDS YP_005048575.1 374298384 11560981 complement(4896886..4897230) 1 NC_016627.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component 4897230 11560981 Clocl_4229 Clostridium clariflavum DSM 19732 ribonuclease P protein component YP_005048575.1 4896886 R 720554 CDS YP_005048576.1 374298385 11560982 complement(4897346..4897495) 1 NC_016627.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated; IMG reference gene:2507487056_SP; 50S ribosomal protein L34 4897495 11560982 Clocl_4230 Clostridium clariflavum DSM 19732 50S ribosomal protein L34 YP_005048576.1 4897346 R 720554 CDS