-- dump date 20140619_042931 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 498214000001 SEQ_END SEQ_END NC_010418.1 266785 266785 DR NC_010418.1; contig end 266785..266785 Clostridium botulinum A3 str. Loch Maree 498214000002 SEQ_END SEQ_END NC_010520.1 3992906 3992906 DR NC_010520.1; contig end 3992906..3992906 Clostridium botulinum A3 str. Loch Maree YP_001715628.1 CDS CLK_A0001 NC_010418.1 219 2561 R identified by match to protein family HMM PF01131; match to protein family HMM PF01751; type I topoisomease complement(219..2561) Clostridium botulinum A3 str. Loch Maree 6030520 YP_001715629.1 CDS recG NC_010418.1 2655 4643 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; ATP-dependent DNA helicase RecG complement(2655..4643) Clostridium botulinum A3 str. Loch Maree 6030519 YP_001715630.1 CDS CLK_A0003 NC_010418.1 4717 5172 R identified by Glimmer3; putative; hypothetical protein complement(4717..5172) Clostridium botulinum A3 str. Loch Maree 6030436 YP_001715631.1 CDS CLK_A0004 NC_010418.1 5230 5787 R identified by Glimmer3; putative; hypothetical protein complement(5230..5787) Clostridium botulinum A3 str. Loch Maree 6030337 YP_001715632.1 CDS CLK_A0005 NC_010418.1 5977 7032 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HD domain-containing protein 5977..7032 Clostridium botulinum A3 str. Loch Maree 6030584 YP_001715633.1 CDS CLK_A0006 NC_010418.1 7073 7972 R identified by match to protein family HMM PF01336; match to protein family HMM PF01966; CMP-binding-factor 1 complement(7073..7972) Clostridium botulinum A3 str. Loch Maree 6030592 YP_001715634.1 CDS CLK_A0007 NC_010418.1 8129 9019 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; RNA polymerase sigma-E factor complement(8129..9019) Clostridium botulinum A3 str. Loch Maree 6030426 YP_001715635.1 CDS CLK_A0008 NC_010418.1 9069 9668 R identified by Glimmer3; putative; hypothetical protein complement(9069..9668) Clostridium botulinum A3 str. Loch Maree 6030450 YP_001715636.1 CDS CLK_A0009 NC_010418.1 9643 9843 R identified by Glimmer3; putative; hypothetical protein complement(9643..9843) Clostridium botulinum A3 str. Loch Maree 6030562 YP_001715637.1 CDS CLK_A0010 NC_010418.1 10019 10243 R identified by Glimmer3; putative; hypothetical protein complement(10019..10243) Clostridium botulinum A3 str. Loch Maree 6030467 YP_001715638.1 CDS CLK_A0011 NC_010418.1 10309 10653 R identified by Glimmer3; putative; hypothetical protein complement(10309..10653) Clostridium botulinum A3 str. Loch Maree 6030306 YP_001715639.1 CDS CLK_A0012 NC_010418.1 10712 10993 R identified by Glimmer3; putative; hypothetical protein complement(10712..10993) Clostridium botulinum A3 str. Loch Maree 6030446 YP_001715640.1 CDS CLK_A0013 NC_010418.1 11036 11470 R identified by Glimmer3; putative; hypothetical protein complement(11036..11470) Clostridium botulinum A3 str. Loch Maree 6030349 YP_001715641.1 CDS CLK_A0014 NC_010418.1 11552 12481 R identified by Glimmer3; putative; hypothetical protein complement(11552..12481) Clostridium botulinum A3 str. Loch Maree 6030497 YP_001715642.1 CDS CLK_A0015 NC_010418.1 12636 13097 D hypothetical protein 12636..13097 Clostridium botulinum A3 str. Loch Maree 6030553 YP_001715643.1 CDS CLK_A0016 NC_010418.1 13236 13508 R hypothetical protein complement(13236..13508) Clostridium botulinum A3 str. Loch Maree 6030538 YP_001715644.1 CDS CLK_A0017 NC_010418.1 13669 16245 R identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1A (PBP-1a) (PBP1a) complement(13669..16245) Clostridium botulinum A3 str. Loch Maree 6030366 YP_001715645.1 CDS CLK_A0018 NC_010418.1 16256 17158 R identified by match to protein family HMM PF02687; efflux ABC transporter, permease protein complement(16256..17158) Clostridium botulinum A3 str. Loch Maree 6030458 YP_001715646.1 CDS CLK_A0019 NC_010418.1 17127 17810 R identified by match to protein family HMM PF00005; methionine import ATP-binding protein MetN 2 complement(17127..17810) Clostridium botulinum A3 str. Loch Maree 6030529 YP_001715647.1 CDS CLK_A0020 NC_010418.1 17829 18173 R hypothetical protein complement(17829..18173) Clostridium botulinum A3 str. Loch Maree 6030350 YP_001715648.1 CDS CLK_A0021 NC_010418.1 18288 20768 R identified by match to protein family HMM PF00271; superfamily II DNA/RNA helicase complement(18288..20768) Clostridium botulinum A3 str. Loch Maree 6030479 YP_001715649.1 CDS CLK_A0022 NC_010418.1 20809 20964 R identified by Glimmer3; putative; hypothetical protein complement(20809..20964) Clostridium botulinum A3 str. Loch Maree 6030346 YP_001715650.1 CDS CLK_A0023 NC_010418.1 21450 23966 R superfamily II DNA/RNA helicase complement(21450..23966) Clostridium botulinum A3 str. Loch Maree 6030477 YP_001715651.1 CDS CLK_A0024 NC_010418.1 24081 24392 R hypothetical protein complement(24081..24392) Clostridium botulinum A3 str. Loch Maree 6030617 YP_001715652.1 CDS CLK_A0025 NC_010418.1 24448 24810 R identified by Glimmer3; putative; hypothetical protein complement(24448..24810) Clostridium botulinum A3 str. Loch Maree 6030524 YP_001715653.1 CDS CLK_A0026 NC_010418.1 25028 26497 R hypothetical protein complement(25028..26497) Clostridium botulinum A3 str. Loch Maree 6030424 YP_001715654.1 CDS CLK_A0027 NC_010418.1 26635 26778 R identified by Glimmer3; putative; hypothetical protein complement(26635..26778) Clostridium botulinum A3 str. Loch Maree 6030528 YP_001715655.1 CDS CLK_A0028 NC_010418.1 26802 27173 R hypothetical protein complement(26802..27173) Clostridium botulinum A3 str. Loch Maree 6030293 YP_001715656.1 CDS CLK_A0029 NC_010418.1 27445 27690 R hypothetical protein complement(27445..27690) Clostridium botulinum A3 str. Loch Maree 6030386 YP_001715657.1 CDS CLK_A0030 NC_010418.1 28118 28510 R identified by Glimmer3; putative; hypothetical protein complement(28118..28510) Clostridium botulinum A3 str. Loch Maree 6030541 YP_001715658.1 CDS CLK_A0031 NC_010418.1 28588 28980 R identified by Glimmer3; putative; hypothetical protein complement(28588..28980) Clostridium botulinum A3 str. Loch Maree 6030556 YP_001715659.1 CDS CLK_A0032 NC_010418.1 29215 29397 R identified by Glimmer3; putative; hypothetical protein complement(29215..29397) Clostridium botulinum A3 str. Loch Maree 6030356 YP_001715660.1 CDS CLK_A0033 NC_010418.1 29724 30143 R identified by Glimmer3; putative; hypothetical protein complement(29724..30143) Clostridium botulinum A3 str. Loch Maree 6030368 YP_001715661.1 CDS CLK_A0034 NC_010418.1 30226 30474 R identified by Glimmer3; putative; hypothetical protein complement(30226..30474) Clostridium botulinum A3 str. Loch Maree 6030539 YP_001715662.1 CDS CLK_A0035 NC_010418.1 30504 30926 R identified by Glimmer3; putative; hypothetical protein complement(30504..30926) Clostridium botulinum A3 str. Loch Maree 6030571 YP_001715663.1 CDS CLK_A0036 NC_010418.1 30982 31251 R identified by Glimmer3; putative; hypothetical protein complement(30982..31251) Clostridium botulinum A3 str. Loch Maree 6030486 YP_001715664.1 CDS CLK_A0037 NC_010418.1 31319 31504 R identified by Glimmer3; putative; hypothetical protein complement(31319..31504) Clostridium botulinum A3 str. Loch Maree 6030395 YP_001715665.1 CDS CLK_A0038 NC_010418.1 31602 32048 R identified by Glimmer3; putative; hypothetical protein complement(31602..32048) Clostridium botulinum A3 str. Loch Maree 6030314 YP_001715666.1 CDS CLK_A0039 NC_010418.1 32066 32212 R identified by Glimmer3; putative; hypothetical protein complement(32066..32212) Clostridium botulinum A3 str. Loch Maree 6030554 YP_001715667.1 CDS CLK_A0040 NC_010418.1 32172 32666 R hypothetical protein complement(32172..32666) Clostridium botulinum A3 str. Loch Maree 6030611 YP_001715668.1 CDS CLK_A0041 NC_010418.1 32777 32941 R identified by Glimmer3; putative; hypothetical protein complement(32777..32941) Clostridium botulinum A3 str. Loch Maree 6030565 YP_001715669.1 CDS CLK_A0042 NC_010418.1 33130 33483 R identified by Glimmer3; putative; hypothetical protein complement(33130..33483) Clostridium botulinum A3 str. Loch Maree 6030434 YP_001715670.1 CDS CLK_A0043 NC_010418.1 33549 33929 R identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550; death-on-curing family protein complement(33549..33929) Clostridium botulinum A3 str. Loch Maree 6030475 YP_001715671.1 CDS CLK_A0044 NC_010418.1 33923 34096 R identified by Glimmer3; putative; hypothetical protein complement(33923..34096) Clostridium botulinum A3 str. Loch Maree 6030473 YP_001715672.1 CDS CLK_A0045 NC_010418.1 34275 35633 R putative Cpp50 complement(34275..35633) Clostridium botulinum A3 str. Loch Maree 6030606 YP_001715673.1 CDS CLK_A0046 NC_010418.1 35824 36510 R identified by Glimmer3; putative; hypothetical protein complement(35824..36510) Clostridium botulinum A3 str. Loch Maree 6030376 YP_001715674.1 CDS CLK_A0047 NC_010418.1 36570 37100 R identified by Glimmer3; putative; hypothetical protein complement(36570..37100) Clostridium botulinum A3 str. Loch Maree 6030552 YP_001715675.1 CDS CLK_A0048 NC_010418.1 37240 37806 R identified by Glimmer3; putative; hypothetical protein complement(37240..37806) Clostridium botulinum A3 str. Loch Maree 6030466 YP_001715676.1 CDS CLK_A0049 NC_010418.1 37898 38257 R putative lipoprotein complement(37898..38257) Clostridium botulinum A3 str. Loch Maree 6030313 YP_001715677.1 CDS CLK_A0050 NC_010418.1 38289 38444 R identified by Glimmer3; putative; hypothetical protein complement(38289..38444) Clostridium botulinum A3 str. Loch Maree 6030521 YP_001715678.1 CDS CLK_A0051 NC_010418.1 38502 38942 R hypothetical protein complement(38502..38942) Clostridium botulinum A3 str. Loch Maree 6030605 YP_001715679.1 CDS CLK_A0052 NC_010418.1 39046 39255 R identified by Glimmer3; putative; hypothetical protein complement(39046..39255) Clostridium botulinum A3 str. Loch Maree 6030351 YP_001715680.1 CDS CLK_A0053 NC_010418.1 39419 39733 R hypothetical protein complement(39419..39733) Clostridium botulinum A3 str. Loch Maree 6030499 YP_001715681.1 CDS CLK_A0054 NC_010418.1 39803 40219 R identified by Glimmer3; putative; hypothetical protein complement(39803..40219) Clostridium botulinum A3 str. Loch Maree 6030609 YP_001715682.1 CDS CLK_A0055 NC_010418.1 40347 40676 R identified by Glimmer3; putative; hypothetical protein complement(40347..40676) Clostridium botulinum A3 str. Loch Maree 6030496 YP_001715683.1 CDS CLK_A0056 NC_010418.1 40722 40859 R identified by Glimmer3; putative; hypothetical protein complement(40722..40859) Clostridium botulinum A3 str. Loch Maree 6030363 YP_001715684.1 CDS CLK_A0057 NC_010418.1 40914 41117 R putative CDC2L2 protein complement(40914..41117) Clostridium botulinum A3 str. Loch Maree 6030616 YP_001715685.1 CDS CLK_A0058 NC_010418.1 41124 41342 R identified by Glimmer3; putative; hypothetical protein complement(41124..41342) Clostridium botulinum A3 str. Loch Maree 6030590 YP_001715686.1 CDS CLK_A0059 NC_010418.1 41414 41635 R hypothetical protein complement(41414..41635) Clostridium botulinum A3 str. Loch Maree 6030448 YP_001715687.1 CDS CLK_A0060 NC_010418.1 41790 41963 R identified by Glimmer3; putative; hypothetical protein complement(41790..41963) Clostridium botulinum A3 str. Loch Maree 6030378 YP_001715688.1 CDS CLK_A0061 NC_010418.1 42192 43226 R identified by Glimmer3; putative; hypothetical protein complement(42192..43226) Clostridium botulinum A3 str. Loch Maree 6030573 YP_001715689.1 CDS CLK_A0062 NC_010418.1 43321 44094 R identified by Glimmer3; putative; hypothetical protein complement(43321..44094) Clostridium botulinum A3 str. Loch Maree 6030405 YP_001715690.1 CDS CLK_A0063 NC_010418.1 44130 44864 R identified by Glimmer3; putative; hypothetical protein complement(44130..44864) Clostridium botulinum A3 str. Loch Maree 6030481 YP_001715691.1 CDS CLK_A0064 NC_010418.1 45032 47125 R identified by match to protein family HMM PF00580; DNA helicase II complement(45032..47125) Clostridium botulinum A3 str. Loch Maree 6030515 YP_001715692.1 CDS CLK_A0065 NC_010418.1 47122 47433 R identified by Glimmer3; putative; hypothetical protein complement(47122..47433) Clostridium botulinum A3 str. Loch Maree 6030523 YP_001715693.1 CDS CLK_A0066 NC_010418.1 47851 48471 R identified by match to protein family HMM PF00565; thermonuclease (TNase) (micrococcal nuclease)(staphylococcal nuclease) complement(47851..48471) Clostridium botulinum A3 str. Loch Maree 6030600 YP_001715694.1 CDS CLK_A0067 NC_010418.1 48645 48947 R identified by Glimmer3; putative; hypothetical protein complement(48645..48947) Clostridium botulinum A3 str. Loch Maree 6030367 YP_001715695.1 CDS CLK_A0068 NC_010418.1 49430 49561 D transposase 49430..49561 Clostridium botulinum A3 str. Loch Maree 6030417 YP_001715696.1 CDS CLK_A0069 NC_010418.1 49800 50750 D identified by match to protein family HMM PF01183; match to protein family HMM PF01471; LycA 49800..50750 Clostridium botulinum A3 str. Loch Maree 6030490 YP_001715697.1 CDS CLK_A0070 NC_010418.1 51634 53106 R toxin complex component ORF-X3 complement(51634..53106) Clostridium botulinum A3 str. Loch Maree 6030353 YP_001715698.1 CDS CLK_A0071 NC_010418.1 53145 55397 R toxin complex component ORF-X2 complement(53145..55397) Clostridium botulinum A3 str. Loch Maree 6030604 YP_001715699.1 CDS CLK_A0072 NC_010418.1 55411 55839 R toxin complex component ORF-X1 complement(55411..55839) Clostridium botulinum A3 str. Loch Maree 6030324 YP_001715700.1 CDS botR NC_010418.1 57069 57623 R identified by match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR03209; transcriptional regulator BotR, P-21 complement(57069..57623) Clostridium botulinum A3 str. Loch Maree 6030447 YP_001715701.1 CDS CLK_A0074 NC_010418.1 57804 59054 D identified by similarity to GB:ABC26000.1; match to protein family HMM PF06597; hypothetical protein 57804..59054 Clostridium botulinum A3 str. Loch Maree 6030383 YP_001715702.1 CDS ntnh NC_010418.1 59070 62549 D identified by match to protein family HMM PF01742; match to protein family HMM PF07953; match to protein family HMM PF08470; botulinum neurotoxin type A3 nontoxic-nonhemagglutinin subunit 59070..62549 Clostridium botulinum A3 str. Loch Maree 6030382 YP_001715703.1 CDS boNT/A3 NC_010418.1 62593 66471 D identified by match to protein family HMM PF01742; match to protein family HMM PF07951; match to protein family HMM PF07952; match to protein family HMM PF07953; botulinum neurotoxin type A3 62593..66471 Clostridium botulinum A3 str. Loch Maree 6030483 YP_001715704.1 CDS CLK_A0077 NC_010418.1 67150 68325 R identified by Glimmer3; putative; hypothetical protein complement(67150..68325) Clostridium botulinum A3 str. Loch Maree 6030304 YP_001715705.1 CDS CLK_A0078 NC_010418.1 68545 68892 R identified by Glimmer3; putative; hypothetical protein complement(68545..68892) Clostridium botulinum A3 str. Loch Maree 6030599 YP_001715706.1 CDS CLK_A0079 NC_010418.1 69294 69509 R identified by Glimmer3; putative; hypothetical protein complement(69294..69509) Clostridium botulinum A3 str. Loch Maree 6030389 YP_001715707.1 CDS CLK_A0080 NC_010418.1 69574 69909 R identified by Glimmer3; putative; hypothetical protein complement(69574..69909) Clostridium botulinum A3 str. Loch Maree 6030307 YP_001715708.1 CDS CLK_A0081 NC_010418.1 70093 70983 R identified by Glimmer3; putative; hypothetical protein complement(70093..70983) Clostridium botulinum A3 str. Loch Maree 6030464 YP_001715709.1 CDS CLK_A0082 NC_010418.1 71025 71555 R identified by Glimmer3; putative; hypothetical protein complement(71025..71555) Clostridium botulinum A3 str. Loch Maree 6030593 YP_001715710.1 CDS CLK_A0083 NC_010418.1 71626 72045 R identified by Glimmer3; putative; hypothetical protein complement(71626..72045) Clostridium botulinum A3 str. Loch Maree 6030392 YP_001715711.1 CDS CLK_A0084 NC_010418.1 72233 72436 R putative ABC transporter substrate-binding lipoprotein complement(72233..72436) Clostridium botulinum A3 str. Loch Maree 6030618 YP_001715712.1 CDS CLK_A0085 NC_010418.1 72797 73531 R hypothetical protein complement(72797..73531) Clostridium botulinum A3 str. Loch Maree 6030443 YP_001715713.1 CDS CLK_A0086 NC_010418.1 73542 74075 R hypothetical protein complement(73542..74075) Clostridium botulinum A3 str. Loch Maree 6030597 YP_001715714.1 CDS CLK_A0087 NC_010418.1 74439 75134 R identified by Glimmer3; putative; hypothetical protein complement(74439..75134) Clostridium botulinum A3 str. Loch Maree 6030493 YP_001715715.1 CDS CLK_A0088 NC_010418.1 75278 75724 R identified by Glimmer3; putative; hypothetical protein complement(75278..75724) Clostridium botulinum A3 str. Loch Maree 6030451 YP_001715716.1 CDS CLK_A0089 NC_010418.1 75770 76315 R identified by Glimmer3; putative; hypothetical protein complement(75770..76315) Clostridium botulinum A3 str. Loch Maree 6030435 YP_001715717.1 CDS CLK_A0090 NC_010418.1 76526 76828 R identified by Glimmer3; putative; hypothetical protein complement(76526..76828) Clostridium botulinum A3 str. Loch Maree 6030296 YP_001715718.1 CDS CLK_A0091 NC_010418.1 76868 77068 R identified by Glimmer3; putative; hypothetical protein complement(76868..77068) Clostridium botulinum A3 str. Loch Maree 6030407 YP_001715719.1 CDS CLK_A0092 NC_010418.1 77182 77754 R identified by Glimmer3; putative; hypothetical protein complement(77182..77754) Clostridium botulinum A3 str. Loch Maree 6030309 YP_001715720.1 CDS CLK_A0093 NC_010418.1 77771 77995 R identified by Glimmer3; putative; hypothetical protein complement(77771..77995) Clostridium botulinum A3 str. Loch Maree 6030596 YP_001715721.1 CDS CLK_A0094 NC_010418.1 78202 78564 R identified by Glimmer3; putative; hypothetical protein complement(78202..78564) Clostridium botulinum A3 str. Loch Maree 6030555 YP_001715722.1 CDS CLK_A0095 NC_010418.1 78643 79407 R hypothetical protein complement(78643..79407) Clostridium botulinum A3 str. Loch Maree 6030525 YP_001715723.1 CDS CLK_A0096 NC_010418.1 79476 79922 R identified by Glimmer3; putative; hypothetical protein complement(79476..79922) Clostridium botulinum A3 str. Loch Maree 6030305 YP_001715724.1 CDS CLK_A0097 NC_010418.1 79956 80321 R hypothetical protein complement(79956..80321) Clostridium botulinum A3 str. Loch Maree 6030427 YP_001715725.1 CDS CLK_A0098 NC_010418.1 80462 82285 R identified by match to protein family HMM PF00078; match to protein family HMM PF01844; match to protein family HMM PF08388; reverse transcriptase/endonuclease protein complement(80462..82285) Clostridium botulinum A3 str. Loch Maree 6030402 YP_001715726.1 CDS CLK_A0099 NC_010418.1 82888 83163 R identified by Glimmer3; putative; hypothetical protein complement(82888..83163) Clostridium botulinum A3 str. Loch Maree 6030504 YP_001715727.1 CDS CLK_A0100 NC_010418.1 83222 83371 R identified by Glimmer3; putative; hypothetical protein complement(83222..83371) Clostridium botulinum A3 str. Loch Maree 6030348 YP_001715728.1 CDS CLK_A0101 NC_010418.1 83424 83861 R phage protein complement(83424..83861) Clostridium botulinum A3 str. Loch Maree 6030613 YP_001715729.1 CDS CLK_A0102 NC_010418.1 83923 84195 R hypothetical protein complement(83923..84195) Clostridium botulinum A3 str. Loch Maree 6030513 YP_001715730.1 CDS CLK_A0103 NC_010418.1 84246 84605 R hypothetical protein complement(84246..84605) Clostridium botulinum A3 str. Loch Maree 6030558 YP_001715731.1 CDS CLK_A0104 NC_010418.1 84724 85422 R hypothetical protein complement(84724..85422) Clostridium botulinum A3 str. Loch Maree 6030308 YP_001715732.1 CDS CLK_A0105 NC_010418.1 85475 85645 R identified by Glimmer3; putative; hypothetical protein complement(85475..85645) Clostridium botulinum A3 str. Loch Maree 6030463 YP_001715733.1 CDS CLK_A0106 NC_010418.1 85786 85965 R identified by Glimmer3; putative; hypothetical protein complement(85786..85965) Clostridium botulinum A3 str. Loch Maree 6030419 YP_001715734.1 CDS CLK_A0107 NC_010418.1 86778 87272 R identified by Glimmer3; putative; hypothetical protein complement(86778..87272) Clostridium botulinum A3 str. Loch Maree 6030365 YP_001715735.1 CDS CLK_A0108 NC_010418.1 87295 87498 R hypothetical protein complement(87295..87498) Clostridium botulinum A3 str. Loch Maree 6030412 YP_001715736.1 CDS CLK_A0109 NC_010418.1 87581 88039 R identified by Glimmer3; putative; hypothetical protein complement(87581..88039) Clostridium botulinum A3 str. Loch Maree 6030414 YP_001715737.1 CDS CLK_A0110 NC_010418.1 88111 88434 R hypothetical protein complement(88111..88434) Clostridium botulinum A3 str. Loch Maree 6030408 YP_001715738.1 CDS CLK_A0111 NC_010418.1 88538 88768 R identified by Glimmer3; putative; hypothetical protein complement(88538..88768) Clostridium botulinum A3 str. Loch Maree 6030549 YP_001715739.1 CDS CLK_A0112 NC_010418.1 89138 89305 R identified by Glimmer3; putative; hypothetical protein complement(89138..89305) Clostridium botulinum A3 str. Loch Maree 6030377 YP_001715740.1 CDS CLK_A0113 NC_010418.1 89330 90019 R identified by Glimmer3; putative; hypothetical protein complement(89330..90019) Clostridium botulinum A3 str. Loch Maree 6030502 YP_001715741.1 CDS CLK_A0114 NC_010418.1 90174 90776 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 90174..90776 Clostridium botulinum A3 str. Loch Maree 6030388 YP_001715742.1 CDS dnaN NC_010418.1 90876 92021 D identified by match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III, beta subunit 90876..92021 Clostridium botulinum A3 str. Loch Maree 6030290 YP_001715743.1 CDS CLK_A0116 NC_010418.1 92430 96050 D identified by match to protein family HMM PF01841; hypothetical protein 92430..96050 Clostridium botulinum A3 str. Loch Maree 6030432 YP_001715744.1 CDS CLK_A0117 NC_010418.1 96142 96810 R hypothetical protein complement(96142..96810) Clostridium botulinum A3 str. Loch Maree 6030581 YP_001715745.1 CDS CLK_A0118 NC_010418.1 96813 99731 R hypothetical protein complement(96813..99731) Clostridium botulinum A3 str. Loch Maree 6030323 YP_001715746.1 CDS CLK_A0119 NC_010418.1 100009 103674 R identified by Glimmer3; putative; hypothetical protein complement(100009..103674) Clostridium botulinum A3 str. Loch Maree 6030326 YP_001715747.1 CDS CLK_A0120 NC_010418.1 104004 104597 R acetyltransferase complement(104004..104597) Clostridium botulinum A3 str. Loch Maree 6030507 YP_001715748.1 CDS CLK_A0121 NC_010418.1 104627 104887 R hypothetical protein complement(104627..104887) Clostridium botulinum A3 str. Loch Maree 6030298 YP_001715749.1 CDS CLK_A0122 NC_010418.1 105126 106169 R identified by Glimmer3; putative; hypothetical protein complement(105126..106169) Clostridium botulinum A3 str. Loch Maree 6030472 YP_001715750.1 CDS CLK_A0123 NC_010418.1 106265 107059 R identified by Glimmer3; putative; hypothetical protein complement(106265..107059) Clostridium botulinum A3 str. Loch Maree 6030551 YP_001715751.1 CDS CLK_A0124 NC_010418.1 107098 107847 R identified by Glimmer3; putative; hypothetical protein complement(107098..107847) Clostridium botulinum A3 str. Loch Maree 6030373 YP_001715752.1 CDS CLK_A0125 NC_010418.1 108421 108822 D hypothetical protein 108421..108822 Clostridium botulinum A3 str. Loch Maree 6030319 YP_001715753.1 CDS CLK_A0126 NC_010418.1 108819 111221 D identified by Glimmer3; putative; hypothetical protein 108819..111221 Clostridium botulinum A3 str. Loch Maree 6030372 YP_001715754.1 CDS CLK_A0127 NC_010418.1 111409 112002 D hypothetical protein 111409..112002 Clostridium botulinum A3 str. Loch Maree 6030316 YP_001715755.1 CDS CLK_A0128 NC_010418.1 112257 113768 D hypothetical protein 112257..113768 Clostridium botulinum A3 str. Loch Maree 6030591 YP_001715756.1 CDS CLK_A0129 NC_010418.1 113746 114948 D identified by Glimmer3; putative; hypothetical protein 113746..114948 Clostridium botulinum A3 str. Loch Maree 6030510 YP_001715757.1 CDS CLK_A0130 NC_010418.1 114967 115113 R identified by Glimmer3; putative; hypothetical protein complement(114967..115113) Clostridium botulinum A3 str. Loch Maree 6030352 YP_001715758.1 CDS CLK_A0131 NC_010418.1 115317 115718 R identified by Glimmer3; putative; hypothetical protein complement(115317..115718) Clostridium botulinum A3 str. Loch Maree 6030312 YP_001715759.1 CDS CLK_A0132 NC_010418.1 116064 116465 D identified by match to protein family HMM PF01797; transposase 116064..116465 Clostridium botulinum A3 str. Loch Maree 6030385 YP_001715760.1 CDS CLK_A0133 NC_010418.1 116484 118004 D putative IS transposase 116484..118004 Clostridium botulinum A3 str. Loch Maree 6030610 YP_001715761.1 CDS CLK_A0134 NC_010418.1 118479 119051 R identified by Glimmer3; putative; hypothetical protein complement(118479..119051) Clostridium botulinum A3 str. Loch Maree 6030379 YP_001715762.1 CDS CLK_A0135 NC_010418.1 119115 119540 R identified by Glimmer3; putative; hypothetical protein complement(119115..119540) Clostridium botulinum A3 str. Loch Maree 6030437 YP_001715763.1 CDS CLK_A0136 NC_010418.1 119552 120016 R hypothetical protein complement(119552..120016) Clostridium botulinum A3 str. Loch Maree 6030509 YP_001715764.1 CDS CLK_A0137 NC_010418.1 120177 121763 R hypothetical protein complement(120177..121763) Clostridium botulinum A3 str. Loch Maree 6030354 YP_001715765.1 CDS CLK_A0138 NC_010418.1 122028 122291 R identified by Glimmer3; putative; hypothetical protein complement(122028..122291) Clostridium botulinum A3 str. Loch Maree 6030576 YP_001715766.1 CDS CLK_A0139 NC_010418.1 122716 123678 R identified by match to protein family HMM PF01145; SPFH domain-containing protein/band 7 family protein complement(122716..123678) Clostridium botulinum A3 str. Loch Maree 6030300 YP_001715767.1 CDS CLK_A0140 NC_010418.1 123796 124029 R identified by Glimmer3; putative; hypothetical protein complement(123796..124029) Clostridium botulinum A3 str. Loch Maree 6030612 YP_001715768.1 CDS CLK_A0141 NC_010418.1 124105 124689 R identified by Glimmer3; putative; hypothetical protein complement(124105..124689) Clostridium botulinum A3 str. Loch Maree 6030294 YP_001715769.1 CDS cas NC_010418.1 125093 125824 D identified by match to protein family HMM TIGR01877; CRISPR-associated protein Cas6 125093..125824 Clostridium botulinum A3 str. Loch Maree 6030488 YP_001715770.1 CDS CLK_A0143 NC_010418.1 125851 127752 D identified by Glimmer3; putative; hypothetical protein 125851..127752 Clostridium botulinum A3 str. Loch Maree 6030362 YP_001715771.1 CDS CLK_A0144 NC_010418.1 127773 128708 D hypothetical protein 127773..128708 Clostridium botulinum A3 str. Loch Maree 6030364 YP_001715772.1 CDS cas5h NC_010418.1 128798 129559 D identified by match to protein family HMM TIGR02592; match to protein family HMM TIGR02593; CRISPR-associated protein Cas5, hmari subtype 128798..129559 Clostridium botulinum A3 str. Loch Maree 6030360 YP_001715773.1 CDS CLK_A0146 NC_010418.1 130695 131033 D identified by Glimmer3; putative; hypothetical protein 130695..131033 Clostridium botulinum A3 str. Loch Maree 6030429 YP_001715774.1 CDS CLK_A0147 NC_010418.1 131839 131976 D identified by Glimmer3; putative; hypothetical protein 131839..131976 Clostridium botulinum A3 str. Loch Maree 6030607 YP_001715775.1 CDS CLK_A0148 NC_010418.1 133093 133437 D hypothetical protein 133093..133437 Clostridium botulinum A3 str. Loch Maree 6030357 YP_001715776.1 CDS CLK_A0149 NC_010418.1 133492 134136 R identified by Glimmer3; putative; hypothetical protein complement(133492..134136) Clostridium botulinum A3 str. Loch Maree 6030380 YP_001715777.1 CDS CLK_A0150 NC_010418.1 134155 134388 R identified by Glimmer3; putative; hypothetical protein complement(134155..134388) Clostridium botulinum A3 str. Loch Maree 6030449 YP_001715778.1 CDS ssb NC_010418.1 134524 134970 R identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein complement(134524..134970) Clostridium botulinum A3 str. Loch Maree 6030320 YP_001715779.1 CDS CLK_A0152 NC_010418.1 135056 136084 R identified by match to protein family HMM PF00877; cell wall-associated hydrolase complement(135056..136084) Clostridium botulinum A3 str. Loch Maree 6030370 YP_001715780.1 CDS CLK_A0153 NC_010418.1 136165 136350 D identified by Glimmer3; putative; hypothetical protein 136165..136350 Clostridium botulinum A3 str. Loch Maree 6030474 YP_001715781.1 CDS CLK_A0154 NC_010418.1 136376 136768 R identified by Glimmer3; putative; hypothetical protein complement(136376..136768) Clostridium botulinum A3 str. Loch Maree 6030563 YP_001715782.1 CDS CLK_A0155 NC_010418.1 136790 136930 R identified by Glimmer3; putative; hypothetical protein complement(136790..136930) Clostridium botulinum A3 str. Loch Maree 6030302 YP_001715783.1 CDS CLK_A0156 NC_010418.1 137020 137475 R identified by Glimmer3; putative; hypothetical protein complement(137020..137475) Clostridium botulinum A3 str. Loch Maree 6030469 YP_001715784.1 CDS CLK_A0157 NC_010418.1 137607 138197 D identified by match to protein family HMM PF01966; GGDEF/GAF/HDIG domain-containing protein 137607..138197 Clostridium botulinum A3 str. Loch Maree 6030438 YP_001715785.1 CDS dnaX NC_010418.1 138325 139740 R identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III, subunits gamma and tau complement(138325..139740) Clostridium botulinum A3 str. Loch Maree 6030547 YP_001715786.1 CDS CLK_A0159 NC_010418.1 139824 140051 R hypothetical protein complement(139824..140051) Clostridium botulinum A3 str. Loch Maree 6030459 YP_001715787.1 CDS CLK_A0160 NC_010418.1 140066 140209 R identified by Glimmer3; putative; hypothetical protein complement(140066..140209) Clostridium botulinum A3 str. Loch Maree 6030344 YP_001715788.1 CDS holA NC_010418.1 140259 141242 R identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III, delta subunit complement(140259..141242) Clostridium botulinum A3 str. Loch Maree 6030485 YP_001715789.1 CDS CLK_A0162 NC_010418.1 141261 141821 R identified by Glimmer3; putative; hypothetical protein complement(141261..141821) Clostridium botulinum A3 str. Loch Maree 6030339 YP_001715790.1 CDS CLK_A0163 NC_010418.1 141967 142158 R identified by Glimmer3; putative; hypothetical protein complement(141967..142158) Clostridium botulinum A3 str. Loch Maree 6030536 YP_001715791.1 CDS CLK_A0164 NC_010418.1 142759 142875 D identified by Glimmer3; putative; hypothetical protein 142759..142875 Clostridium botulinum A3 str. Loch Maree 6030403 YP_001715792.1 CDS CLK_A0165 NC_010418.1 143066 144388 R hypothetical protein complement(143066..144388) Clostridium botulinum A3 str. Loch Maree 6030508 YP_001715793.1 CDS CLK_A0166 NC_010418.1 144656 144877 R identified by Glimmer3; putative; hypothetical protein complement(144656..144877) Clostridium botulinum A3 str. Loch Maree 6030516 YP_001715794.1 CDS CLK_A0167 NC_010418.1 145006 145197 R identified by Glimmer3; putative; hypothetical protein complement(145006..145197) Clostridium botulinum A3 str. Loch Maree 6030503 YP_001715795.1 CDS CLK_A0168 NC_010418.1 145399 145599 R identified by Glimmer3; putative; hypothetical protein complement(145399..145599) Clostridium botulinum A3 str. Loch Maree 6030615 YP_001715796.1 CDS CLK_A0169 NC_010418.1 145654 145812 R identified by Glimmer3; putative; hypothetical protein complement(145654..145812) Clostridium botulinum A3 str. Loch Maree 6030336 YP_001715797.1 CDS CLK_A0170 NC_010418.1 145862 146032 R identified by Glimmer3; putative; hypothetical protein complement(145862..146032) Clostridium botulinum A3 str. Loch Maree 6030430 YP_001715798.1 CDS CLK_A0171 NC_010418.1 146108 146371 R identified by Glimmer3; putative; hypothetical protein complement(146108..146371) Clostridium botulinum A3 str. Loch Maree 6030342 YP_001715799.1 CDS CLK_A0172 NC_010418.1 146421 146609 R PhnB protein complement(146421..146609) Clostridium botulinum A3 str. Loch Maree 6030495 YP_001715800.1 CDS CLK_A0173 NC_010418.1 146799 147038 R identified by Glimmer3; putative; hypothetical protein complement(146799..147038) Clostridium botulinum A3 str. Loch Maree 6030455 YP_001715801.1 CDS CLK_A0174 NC_010418.1 147202 147315 R identified by Glimmer3; putative; hypothetical protein complement(147202..147315) Clostridium botulinum A3 str. Loch Maree 6030321 YP_001715802.1 CDS CLK_A0175 NC_010418.1 147405 147974 R identified by Glimmer3; putative; hypothetical protein complement(147405..147974) Clostridium botulinum A3 str. Loch Maree 6030398 YP_001715803.1 CDS CLK_A0176 NC_010418.1 148086 148283 R identified by Glimmer3; putative; hypothetical protein complement(148086..148283) Clostridium botulinum A3 str. Loch Maree 6030327 YP_001715804.1 CDS CLK_A0177 NC_010418.1 148423 148782 R identified by Glimmer3; putative; hypothetical protein complement(148423..148782) Clostridium botulinum A3 str. Loch Maree 6030359 YP_001715805.1 CDS CLK_A0178 NC_010418.1 148896 149171 R hypothetical protein complement(148896..149171) Clostridium botulinum A3 str. Loch Maree 6030456 YP_001715806.1 CDS CLK_A0179 NC_010418.1 149422 149583 R identified by Glimmer3; putative; hypothetical protein complement(149422..149583) Clostridium botulinum A3 str. Loch Maree 6030586 YP_001715807.1 CDS CLK_A0180 NC_010418.1 149564 149917 R hypothetical protein complement(149564..149917) Clostridium botulinum A3 str. Loch Maree 6030492 YP_001715808.1 CDS CLK_A0181 NC_010418.1 149937 150572 R phage protein complement(149937..150572) Clostridium botulinum A3 str. Loch Maree 6030476 YP_001715809.1 CDS CLK_A0182 NC_010418.1 150904 152433 R TPR repeat-containing protein complement(150904..152433) Clostridium botulinum A3 str. Loch Maree 6030433 YP_001715810.1 CDS CLK_A0183 NC_010418.1 152544 153953 R identified by match to protein family HMM PF01966; HD domain-containing protein complement(152544..153953) Clostridium botulinum A3 str. Loch Maree 6030416 YP_001715811.1 CDS CLK_A0184 NC_010418.1 154096 154233 R identified by Glimmer3; putative; hypothetical protein complement(154096..154233) Clostridium botulinum A3 str. Loch Maree 6030567 YP_001715812.1 CDS CLK_A0185 NC_010418.1 154295 154888 R putative guanylate kinase complement(154295..154888) Clostridium botulinum A3 str. Loch Maree 6030418 YP_001715813.1 CDS CLK_A0186 NC_010418.1 154909 155136 R hypothetical protein complement(154909..155136) Clostridium botulinum A3 str. Loch Maree 6030369 YP_001715814.1 CDS CLK_A0187 NC_010418.1 155521 156174 R hypothetical protein complement(155521..156174) Clostridium botulinum A3 str. Loch Maree 6030332 YP_001715815.1 CDS CLK_A0188 NC_010418.1 156234 156989 R identified by Glimmer3; putative; hypothetical protein complement(156234..156989) Clostridium botulinum A3 str. Loch Maree 6030603 YP_001715816.1 CDS CLK_A0189 NC_010418.1 157169 157291 R identified by Glimmer3; putative; hypothetical protein complement(157169..157291) Clostridium botulinum A3 str. Loch Maree 6030422 YP_001715817.1 CDS CLK_A0190 NC_010418.1 157509 158576 R DNA modification methylase complement(157509..158576) Clostridium botulinum A3 str. Loch Maree 6030601 YP_001715818.1 CDS CLK_A0191 NC_010418.1 158694 160118 R identified by match to protein family HMM PF01807; DNA primase complement(158694..160118) Clostridium botulinum A3 str. Loch Maree 6030411 YP_001715819.1 CDS CLK_A0192 NC_010418.1 160398 160790 D hypothetical protein 160398..160790 Clostridium botulinum A3 str. Loch Maree 6030341 YP_001715820.1 CDS CLK_A0193 NC_010418.1 160792 161004 D identified by match to protein family HMM PF01381; hypothetical protein 160792..161004 Clostridium botulinum A3 str. Loch Maree 6030532 YP_001715821.1 CDS CLK_A0194 NC_010418.1 161192 161509 R identified by Glimmer3; putative; hypothetical protein complement(161192..161509) Clostridium botulinum A3 str. Loch Maree 6030329 YP_001715822.1 CDS CLK_A0195 NC_010418.1 161763 162200 R phage protein complement(161763..162200) Clostridium botulinum A3 str. Loch Maree 6030415 YP_001715823.1 CDS CLK_A0196 NC_010418.1 162261 162533 R identified by Glimmer3; putative; hypothetical protein complement(162261..162533) Clostridium botulinum A3 str. Loch Maree 6030531 YP_001715824.1 CDS CLK_A0197 NC_010418.1 162616 162897 R identified by Glimmer3; putative; hypothetical protein complement(162616..162897) Clostridium botulinum A3 str. Loch Maree 6030572 YP_001715825.1 CDS CLK_A0198 NC_010418.1 162976 163323 R hypothetical protein complement(162976..163323) Clostridium botulinum A3 str. Loch Maree 6030355 YP_001715826.1 CDS CLK_A0199 NC_010418.1 163529 163828 R putative sodium/alanine symporter family protein complement(163529..163828) Clostridium botulinum A3 str. Loch Maree 6030394 YP_001715827.1 CDS CLK_A0200 NC_010418.1 164342 164539 R identified by Glimmer3; putative; hypothetical protein complement(164342..164539) Clostridium botulinum A3 str. Loch Maree 6030568 YP_001715828.1 CDS CLK_A0201 NC_010418.1 164660 165124 R identified by Glimmer3; putative; hypothetical protein complement(164660..165124) Clostridium botulinum A3 str. Loch Maree 6030421 YP_001715829.1 CDS CLK_A0202 NC_010418.1 165363 165839 R identified by Glimmer3; putative; hypothetical protein complement(165363..165839) Clostridium botulinum A3 str. Loch Maree 6030530 YP_001715830.1 CDS CLK_A0203 NC_010418.1 165926 166780 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; modification methylase complement(165926..166780) Clostridium botulinum A3 str. Loch Maree 6030452 YP_001715831.1 CDS CLK_A0204 NC_010418.1 166785 166949 R identified by Glimmer3; putative; hypothetical protein complement(166785..166949) Clostridium botulinum A3 str. Loch Maree 6030533 YP_001715832.1 CDS CLK_A0205 NC_010418.1 167172 167987 R identified by Glimmer3; putative; hypothetical protein complement(167172..167987) Clostridium botulinum A3 str. Loch Maree 6030511 YP_001715833.1 CDS CLK_A0206 NC_010418.1 168073 168444 R identified by Glimmer3; putative; hypothetical protein complement(168073..168444) Clostridium botulinum A3 str. Loch Maree 6030374 YP_001715834.1 CDS CLK_A0207 NC_010418.1 168593 169501 R identified by Glimmer3; putative; hypothetical protein complement(168593..169501) Clostridium botulinum A3 str. Loch Maree 6030331 YP_001715835.1 CDS CLK_A0208 NC_010418.1 169704 169919 R identified by Glimmer3; putative; hypothetical protein complement(169704..169919) Clostridium botulinum A3 str. Loch Maree 6030480 YP_001715836.1 CDS CLK_A0209 NC_010418.1 170006 170296 R identified by Glimmer3; putative; hypothetical protein complement(170006..170296) Clostridium botulinum A3 str. Loch Maree 6030311 YP_001715837.1 CDS CLK_A0210 NC_010418.1 170324 170500 R hypothetical protein complement(170324..170500) Clostridium botulinum A3 str. Loch Maree 6030371 YP_001715838.1 CDS CLK_A0211 NC_010418.1 170511 171131 R ATPase complement(170511..171131) Clostridium botulinum A3 str. Loch Maree 6030577 YP_001715839.1 CDS CLK_A0212 NC_010418.1 171189 171953 R identified by match to protein family HMM PF01555; DNA methylase complement(171189..171953) Clostridium botulinum A3 str. Loch Maree 6030557 YP_001715840.1 CDS CLK_A0213 NC_010418.1 171984 172451 R hypothetical protein complement(171984..172451) Clostridium botulinum A3 str. Loch Maree 6030361 YP_001715841.1 CDS CLK_A0214 NC_010418.1 172514 172870 R identified by Glimmer3; putative; hypothetical protein complement(172514..172870) Clostridium botulinum A3 str. Loch Maree 6030393 YP_001715842.1 CDS CLK_A0215 NC_010418.1 172931 173116 R identified by Glimmer3; putative; hypothetical protein complement(172931..173116) Clostridium botulinum A3 str. Loch Maree 6030317 YP_001715843.1 CDS CLK_A0216 NC_010418.1 173133 173300 R identified by Glimmer3; putative; hypothetical protein complement(173133..173300) Clostridium botulinum A3 str. Loch Maree 6030391 YP_001715844.1 CDS CLK_A0217 NC_010418.1 173336 173548 R identified by Glimmer3; putative; hypothetical protein complement(173336..173548) Clostridium botulinum A3 str. Loch Maree 6030420 YP_001715845.1 CDS CLK_A0218 NC_010418.1 174194 175615 R identified by match to protein family HMM PF00669; flagellin complement(174194..175615) Clostridium botulinum A3 str. Loch Maree 6030512 YP_001715846.1 CDS CLK_A0219 NC_010418.1 175726 175854 R identified by Glimmer3; putative; hypothetical protein complement(175726..175854) Clostridium botulinum A3 str. Loch Maree 6030478 YP_001715847.1 CDS CLK_A0220 NC_010418.1 176133 177617 D hypothetical protein 176133..177617 Clostridium botulinum A3 str. Loch Maree 6030526 YP_001715848.1 CDS CLK_A0221 NC_010418.1 178290 179327 D identified by Glimmer3; putative; hypothetical protein 178290..179327 Clostridium botulinum A3 str. Loch Maree 6030544 YP_001715849.1 CDS CLK_A0222 NC_010418.1 179894 180103 R identified by match to protein family HMM PF03118; DNA-directed RNA polymerase subunit alpha complement(179894..180103) Clostridium botulinum A3 str. Loch Maree 6030358 YP_001715850.1 CDS spoIIID NC_010418.1 180124 180372 R identified by match to protein family HMM TIGR02844; sporulation transcriptional regulator spoiiid complement(180124..180372) Clostridium botulinum A3 str. Loch Maree 6030406 YP_001715851.1 CDS CLK_A0224 NC_010418.1 180483 180821 R identified by Glimmer3; putative; hypothetical protein complement(180483..180821) Clostridium botulinum A3 str. Loch Maree 6030454 YP_001715852.1 CDS CLK_A0225 NC_010418.1 181238 181468 D hypothetical protein 181238..181468 Clostridium botulinum A3 str. Loch Maree 6030559 YP_001715853.1 CDS CLK_A0226 NC_010418.1 181510 181827 R hypothetical protein complement(181510..181827) Clostridium botulinum A3 str. Loch Maree 6030295 YP_001715854.1 CDS CLK_A0227 NC_010418.1 181805 182872 R identified by Glimmer3; putative; hypothetical protein complement(181805..182872) Clostridium botulinum A3 str. Loch Maree 6030292 YP_001715855.1 CDS CLK_A0228 NC_010418.1 183257 184066 R identified by Glimmer3; putative; hypothetical protein complement(183257..184066) Clostridium botulinum A3 str. Loch Maree 6030500 YP_001715856.1 CDS CLK_A0229 NC_010418.1 184505 185170 R hypothetical protein complement(184505..185170) Clostridium botulinum A3 str. Loch Maree 6030494 YP_001715857.1 CDS CLK_A0230 NC_010418.1 185327 186079 R identified by match to protein family HMM PF06539; hypothetical protein complement(185327..186079) Clostridium botulinum A3 str. Loch Maree 6030315 YP_001715858.1 CDS CLK_A0231 NC_010418.1 186156 186794 R identified by match to protein family HMM PF04012; phage shock protein A complement(186156..186794) Clostridium botulinum A3 str. Loch Maree 6030487 YP_001715859.1 CDS CLK_A0232 NC_010418.1 186917 187612 R identified by Glimmer3; putative; hypothetical protein complement(186917..187612) Clostridium botulinum A3 str. Loch Maree 6030444 YP_001715860.1 CDS CLK_A0233 NC_010418.1 187928 188089 R identified by Glimmer3; putative; hypothetical protein complement(187928..188089) Clostridium botulinum A3 str. Loch Maree 6030375 YP_001715861.1 CDS CLK_A0234 NC_010418.1 188138 188644 R hypothetical protein complement(188138..188644) Clostridium botulinum A3 str. Loch Maree 6030343 YP_001715862.1 CDS CLK_A0235 NC_010418.1 188826 189278 R identified by Glimmer3; putative; hypothetical protein complement(188826..189278) Clostridium botulinum A3 str. Loch Maree 6030404 YP_001715863.1 CDS CLK_A0236 NC_010418.1 189323 189670 R identified by Glimmer3; putative; hypothetical protein complement(189323..189670) Clostridium botulinum A3 str. Loch Maree 6030338 YP_001715864.1 CDS CLK_A0237 NC_010418.1 189711 189863 D identified by Glimmer3; putative; hypothetical protein 189711..189863 Clostridium botulinum A3 str. Loch Maree 6030540 YP_001715865.1 CDS CLK_A0238 NC_010418.1 189982 190650 R identified by match to protein family HMM PF00149; serine/threonine protein phosphatase complement(189982..190650) Clostridium botulinum A3 str. Loch Maree 6030518 YP_001715866.1 CDS CLK_A0239 NC_010418.1 190702 190884 R identified by Glimmer3; putative; hypothetical protein complement(190702..190884) Clostridium botulinum A3 str. Loch Maree 6030297 YP_001715867.1 CDS CLK_A0240 NC_010418.1 191282 191785 R hypothetical protein complement(191282..191785) Clostridium botulinum A3 str. Loch Maree 6030291 YP_001715868.1 CDS CLK_A0241 NC_010418.1 192061 192570 R identified by Glimmer3; putative; hypothetical protein complement(192061..192570) Clostridium botulinum A3 str. Loch Maree 6030498 YP_001715869.1 CDS CLK_A0242 NC_010418.1 192979 193287 R identified by Glimmer3; putative; hypothetical protein complement(192979..193287) Clostridium botulinum A3 str. Loch Maree 6030534 YP_001715870.1 CDS CLK_A0243 NC_010418.1 193355 193678 R identified by Glimmer3; putative; hypothetical protein complement(193355..193678) Clostridium botulinum A3 str. Loch Maree 6030410 YP_001715871.1 CDS CLK_A0244 NC_010418.1 193703 193933 R hypothetical protein complement(193703..193933) Clostridium botulinum A3 str. Loch Maree 6030582 YP_001715872.1 CDS CLK_A0245 NC_010418.1 193994 194215 R identified by Glimmer3; putative; hypothetical protein complement(193994..194215) Clostridium botulinum A3 str. Loch Maree 6030588 YP_001715873.1 CDS CLK_A0246 NC_010418.1 194246 194797 R identified by Glimmer3; putative; hypothetical protein complement(194246..194797) Clostridium botulinum A3 str. Loch Maree 6030583 YP_001715874.1 CDS CLK_A0247 NC_010418.1 194794 195498 R hypothetical protein complement(194794..195498) Clostridium botulinum A3 str. Loch Maree 6030445 YP_001715875.1 CDS CLK_A0248 NC_010418.1 195560 195922 R hypothetical protein complement(195560..195922) Clostridium botulinum A3 str. Loch Maree 6030527 YP_001715876.1 CDS CLK_A0249 NC_010418.1 195958 196443 R identified by Glimmer3; putative; hypothetical protein complement(195958..196443) Clostridium botulinum A3 str. Loch Maree 6030595 YP_001715877.1 CDS CLK_A0250 NC_010418.1 196482 196814 R identified by Glimmer3; putative; hypothetical protein complement(196482..196814) Clostridium botulinum A3 str. Loch Maree 6030574 YP_001715878.1 CDS CLK_A0251 NC_010418.1 196880 197140 R identified by Glimmer3; putative; hypothetical protein complement(196880..197140) Clostridium botulinum A3 str. Loch Maree 6030564 YP_001715879.1 CDS CLK_A0252 NC_010418.1 197196 197540 R hypothetical protein complement(197196..197540) Clostridium botulinum A3 str. Loch Maree 6030543 YP_001715880.1 CDS CLK_A0253 NC_010418.1 197738 197944 R identified by Glimmer3; putative; hypothetical protein complement(197738..197944) Clostridium botulinum A3 str. Loch Maree 6030457 YP_001715881.1 CDS CLK_A0254 NC_010418.1 198302 199390 R identified by match to protein family HMM PF04122; amidase domain-containing protein complement(198302..199390) Clostridium botulinum A3 str. Loch Maree 6030522 YP_001715882.1 CDS CLK_A0255 NC_010418.1 199471 199794 R identified by Glimmer3; putative; hypothetical protein complement(199471..199794) Clostridium botulinum A3 str. Loch Maree 6030594 YP_001715883.1 CDS CLK_A0256 NC_010418.1 199916 200620 R identified by Glimmer3; putative; hypothetical protein complement(199916..200620) Clostridium botulinum A3 str. Loch Maree 6030550 YP_001715884.1 CDS CLK_A0257 NC_010418.1 200774 201067 R identified by Glimmer3; putative; hypothetical protein complement(200774..201067) Clostridium botulinum A3 str. Loch Maree 6030440 YP_001715885.1 CDS CLK_A0258 NC_010418.1 201252 202277 R hypothetical protein complement(201252..202277) Clostridium botulinum A3 str. Loch Maree 6030465 YP_001715886.1 CDS CLK_A0259 NC_010418.1 202382 202708 R identified by Glimmer3; putative; hypothetical protein complement(202382..202708) Clostridium botulinum A3 str. Loch Maree 6030325 YP_001715887.1 CDS CLK_A0260 NC_010418.1 202837 203226 R identified by Glimmer3; putative; hypothetical protein complement(202837..203226) Clostridium botulinum A3 str. Loch Maree 6030608 YP_001715888.1 CDS CLK_A0261 NC_010418.1 203279 203584 R identified by Glimmer3; putative; hypothetical protein complement(203279..203584) Clostridium botulinum A3 str. Loch Maree 6030413 YP_001715889.1 CDS CLK_A0262 NC_010418.1 203651 203836 R hypothetical protein complement(203651..203836) Clostridium botulinum A3 str. Loch Maree 6030428 YP_001715890.1 CDS CLK_A0263 NC_010418.1 203907 204086 R hypothetical protein complement(203907..204086) Clostridium botulinum A3 str. Loch Maree 6030396 YP_001715891.1 CDS CLK_A0264 NC_010418.1 204136 204354 R identified by Glimmer3; putative; hypothetical protein complement(204136..204354) Clostridium botulinum A3 str. Loch Maree 6030542 YP_001715892.1 CDS CLK_A0265 NC_010418.1 204462 204998 R phage protein complement(204462..204998) Clostridium botulinum A3 str. Loch Maree 6030489 YP_001715893.1 CDS CLK_A0266 NC_010418.1 205061 205522 R hypothetical protein complement(205061..205522) Clostridium botulinum A3 str. Loch Maree 6030548 YP_001715894.1 CDS CLK_A0267 NC_010418.1 205627 206418 R identified by Glimmer3; putative; hypothetical protein complement(205627..206418) Clostridium botulinum A3 str. Loch Maree 6030347 YP_001715895.1 CDS CLK_A0268 NC_010418.1 206518 206973 R identified by Glimmer3; putative; hypothetical protein complement(206518..206973) Clostridium botulinum A3 str. Loch Maree 6030401 YP_001715896.1 CDS CLK_A0269 NC_010418.1 207357 208799 R putative IS transposase complement(207357..208799) Clostridium botulinum A3 str. Loch Maree 6030575 YP_001715897.1 CDS CLK_A0270 NC_010418.1 208824 208952 R ISCpe2, transposase OrfA complement(208824..208952) Clostridium botulinum A3 str. Loch Maree 6030501 YP_001715898.1 CDS CLK_A0271 NC_010418.1 209223 209780 R identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; putative sporulation protein YyaC complement(209223..209780) Clostridium botulinum A3 str. Loch Maree 6030470 YP_001715899.1 CDS CLK_A0272 NC_010418.1 210127 210933 D identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase 210127..210933 Clostridium botulinum A3 str. Loch Maree 6030587 YP_001715900.1 CDS CLK_A0273 NC_010418.1 211224 212948 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; putative cell division protease FtsH-like protein complement(211224..212948) Clostridium botulinum A3 str. Loch Maree 6030310 YP_001715901.1 CDS CLK_A0274 NC_010418.1 213038 213349 R DNA gyrase, A subunit complement(213038..213349) Clostridium botulinum A3 str. Loch Maree 6030506 YP_001715902.1 CDS CLK_A0275 NC_010418.1 213644 214132 R putative lipoprotein complement(213644..214132) Clostridium botulinum A3 str. Loch Maree 6030328 YP_001715903.1 CDS CLK_A0276 NC_010418.1 214146 214613 R hypothetical protein complement(214146..214613) Clostridium botulinum A3 str. Loch Maree 6030461 YP_001715904.1 CDS CLK_A0277 NC_010418.1 214728 214946 R identified by Glimmer3; putative; hypothetical protein complement(214728..214946) Clostridium botulinum A3 str. Loch Maree 6030330 YP_001715905.1 CDS CLK_A0278 NC_010418.1 215030 215263 R identified by Glimmer3; putative; hypothetical protein complement(215030..215263) Clostridium botulinum A3 str. Loch Maree 6030580 YP_001715906.1 CDS CLK_A0279 NC_010418.1 215729 215902 R identified by Glimmer3; putative; hypothetical protein complement(215729..215902) Clostridium botulinum A3 str. Loch Maree 6030589 YP_001715907.1 CDS CLK_A0280 NC_010418.1 215923 217002 R identified by Glimmer3; putative; hypothetical protein complement(215923..217002) Clostridium botulinum A3 str. Loch Maree 6030505 YP_001715908.1 CDS CLK_A0281 NC_010418.1 217022 217918 R identified by Glimmer3; putative; hypothetical protein complement(217022..217918) Clostridium botulinum A3 str. Loch Maree 6030425 YP_001715909.1 CDS CLK_A0282 NC_010418.1 217942 219348 R identified by Glimmer3; putative; hypothetical protein complement(217942..219348) Clostridium botulinum A3 str. Loch Maree 6030614 YP_001715910.1 CDS CLK_A0283 NC_010418.1 219379 220107 R identified by Glimmer3; putative; hypothetical protein complement(219379..220107) Clostridium botulinum A3 str. Loch Maree 6030482 YP_001715911.1 CDS CLK_A0284 NC_010418.1 220308 225056 R identified by Glimmer3; putative; hypothetical protein complement(220308..225056) Clostridium botulinum A3 str. Loch Maree 6030560 YP_001715912.1 CDS CLK_A0285 NC_010418.1 225300 226628 R identified by match to protein family HMM PF00772; match to protein family HMM PF03796; replicative DNA helicase complement(225300..226628) Clostridium botulinum A3 str. Loch Maree 6030303 YP_001715913.1 CDS CLK_A0286 NC_010418.1 226618 227436 R hypothetical protein complement(226618..227436) Clostridium botulinum A3 str. Loch Maree 6030399 YP_001715914.1 CDS CLK_A0287 NC_010418.1 227423 228613 R identified by Glimmer3; putative; hypothetical protein complement(227423..228613) Clostridium botulinum A3 str. Loch Maree 6030602 YP_001715915.1 CDS CLK_A0288 NC_010418.1 228655 229071 R identified by Glimmer3; putative; hypothetical protein complement(228655..229071) Clostridium botulinum A3 str. Loch Maree 6030570 YP_001715916.1 CDS CLK_A0289 NC_010418.1 229064 229579 R identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; putative sigma K complement(229064..229579) Clostridium botulinum A3 str. Loch Maree 6030334 YP_001715917.1 CDS CLK_A0290 NC_010418.1 229744 230628 R identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; putative RNA polymerase sigma factor complement(229744..230628) Clostridium botulinum A3 str. Loch Maree 6030537 YP_001715918.1 CDS CLK_A0291 NC_010418.1 230719 231507 R identified by match to protein family HMM PF00575; ribosomal protein S1 complement(230719..231507) Clostridium botulinum A3 str. Loch Maree 6030471 YP_001715919.1 CDS CLK_A0292 NC_010418.1 231801 232088 R identified by match to protein family HMM PF01476; LysM domain-containing protein complement(231801..232088) Clostridium botulinum A3 str. Loch Maree 6030387 YP_001715920.1 CDS CLK_A0293 NC_010418.1 232425 233642 R plasmid transfer factor, TraK complement(232425..233642) Clostridium botulinum A3 str. Loch Maree 6030535 YP_001715921.1 CDS CLK_A0294 NC_010418.1 233753 235699 R identified by match to protein family HMM PF02534; ATPase involved in conjugal plasmid transfer complement(233753..235699) Clostridium botulinum A3 str. Loch Maree 6030381 YP_001715922.1 CDS CLK_A0295 NC_010418.1 235699 236595 R identified by Glimmer3; putative; hypothetical protein complement(235699..236595) Clostridium botulinum A3 str. Loch Maree 6030460 YP_001715923.1 CDS CLK_A0296 NC_010418.1 237203 237847 R identified by Glimmer3; putative; hypothetical protein complement(237203..237847) Clostridium botulinum A3 str. Loch Maree 6030299 YP_001715924.1 CDS CLK_A0297 NC_010418.1 237896 238273 R hypothetical protein complement(237896..238273) Clostridium botulinum A3 str. Loch Maree 6030569 YP_001715925.1 CDS CLK_A0298 NC_010418.1 238748 239800 R hypothetical protein complement(238748..239800) Clostridium botulinum A3 str. Loch Maree 6030441 YP_001715926.1 CDS CLK_A0299 NC_010418.1 239931 240374 R identified by match to protein family HMM PF01478; A24 family peptidase complement(239931..240374) Clostridium botulinum A3 str. Loch Maree 6030484 YP_001715927.1 CDS CLK_A0300 NC_010418.1 240377 241486 R identified by Glimmer3; putative; hypothetical protein complement(240377..241486) Clostridium botulinum A3 str. Loch Maree 6030409 YP_001715928.1 CDS CLK_A0301 NC_010418.1 241563 242222 R identified by Glimmer3; putative; hypothetical protein complement(241563..242222) Clostridium botulinum A3 str. Loch Maree 6030439 YP_001715929.1 CDS CLK_A0302 NC_010418.1 242364 243011 R identified by Glimmer3; putative; hypothetical protein complement(242364..243011) Clostridium botulinum A3 str. Loch Maree 6030442 YP_001715930.1 CDS CLK_A0303 NC_010418.1 243016 243486 R identified by Glimmer3; putative; hypothetical protein complement(243016..243486) Clostridium botulinum A3 str. Loch Maree 6030384 YP_001715931.1 CDS CLK_A0304 NC_010418.1 243501 243920 R identified by match to protein family HMM PF07811; hypothetical protein complement(243501..243920) Clostridium botulinum A3 str. Loch Maree 6030318 YP_001715932.1 CDS CLK_A0305 NC_010418.1 243881 244147 R stage III sporulation protein D (14 kDa transcription factor) complement(243881..244147) Clostridium botulinum A3 str. Loch Maree 6030566 YP_001715933.1 CDS CLK_A0306 NC_010418.1 244309 244557 R identified by Glimmer3; putative; hypothetical protein complement(244309..244557) Clostridium botulinum A3 str. Loch Maree 6030598 YP_001715934.1 CDS CLK_A0307 NC_010418.1 244730 244900 R identified by Glimmer3; putative; hypothetical protein complement(244730..244900) Clostridium botulinum A3 str. Loch Maree 6030390 YP_001715935.1 CDS CLK_A0308 NC_010418.1 244996 245748 R identified by match to protein family HMM PF00482; type II secretion system protein F complement(244996..245748) Clostridium botulinum A3 str. Loch Maree 6030431 YP_001715936.1 CDS CLK_A0309 NC_010418.1 245766 246692 R identified by match to protein family HMM PF00482; type II secretion system protein F complement(245766..246692) Clostridium botulinum A3 str. Loch Maree 6030514 YP_001715937.1 CDS CLK_A0310 NC_010418.1 246812 247159 R hypothetical protein complement(246812..247159) Clostridium botulinum A3 str. Loch Maree 6030561 YP_001715938.1 CDS CLK_A0311 NC_010418.1 247184 248443 R identified by match to protein family HMM PF00437; type II secretion system protein E complement(247184..248443) Clostridium botulinum A3 str. Loch Maree 6030585 YP_001715939.1 CDS CLK_A0312 NC_010418.1 248511 249974 R septum formation inhibitor-activating ATPase complement(248511..249974) Clostridium botulinum A3 str. Loch Maree 6030301 YP_001715940.1 CDS CLK_A0313 NC_010418.1 250048 250674 R identified by match to protein family HMM PF08666; SAF domain-containing protein complement(250048..250674) Clostridium botulinum A3 str. Loch Maree 6030397 YP_001715941.1 CDS CLK_A0314 NC_010418.1 250781 251326 R hypothetical protein complement(250781..251326) Clostridium botulinum A3 str. Loch Maree 6030579 YP_001715942.1 CDS CLK_A0315 NC_010418.1 251447 253198 R identified by match to protein family HMM PF00877; NLP/P60 protein complement(251447..253198) Clostridium botulinum A3 str. Loch Maree 6030423 YP_001715943.1 CDS CLK_A0316 NC_010418.1 253234 255018 R hypothetical protein complement(253234..255018) Clostridium botulinum A3 str. Loch Maree 6030400 YP_001715944.1 CDS CLK_A0317 NC_010418.1 255091 255492 R identified by Glimmer3; putative; hypothetical protein complement(255091..255492) Clostridium botulinum A3 str. Loch Maree 6030345 YP_001715945.1 CDS CLK_A0318 NC_010418.1 255710 257572 R AAA ATPase complement(255710..257572) Clostridium botulinum A3 str. Loch Maree 6030491 YP_001715946.1 CDS CLK_A0319 NC_010418.1 257562 258290 R hypothetical protein complement(257562..258290) Clostridium botulinum A3 str. Loch Maree 6030546 YP_001715947.1 CDS CLK_A0320 NC_010418.1 258373 258654 R hypothetical protein complement(258373..258654) Clostridium botulinum A3 str. Loch Maree 6030453 YP_001715948.1 CDS CLK_A0321 NC_010418.1 258725 259102 R hypothetical protein complement(258725..259102) Clostridium botulinum A3 str. Loch Maree 6030322 YP_001715949.1 CDS CLK_A0322 NC_010418.1 259285 259620 R hypothetical protein complement(259285..259620) Clostridium botulinum A3 str. Loch Maree 6030340 YP_001715950.1 CDS CLK_A0323 NC_010418.1 259673 260488 R identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; putative sporulation sigma factor SigK complement(259673..260488) Clostridium botulinum A3 str. Loch Maree 6030462 YP_001715951.1 CDS CLK_A0324 NC_010418.1 260443 260754 R identified by Glimmer3; putative; hypothetical protein complement(260443..260754) Clostridium botulinum A3 str. Loch Maree 6030578 YP_001715952.1 CDS CLK_A0325 NC_010418.1 260877 262820 R hypothetical protein complement(260877..262820) Clostridium botulinum A3 str. Loch Maree 6030468 YP_001715953.1 CDS CLK_A0326 NC_010418.1 262867 263448 R identified by Glimmer3; putative; hypothetical protein complement(262867..263448) Clostridium botulinum A3 str. Loch Maree 6030517 YP_001715954.1 CDS CLK_A0327 NC_010418.1 263584 265518 R putative ATPase involved in DNA repair complement(263584..265518) Clostridium botulinum A3 str. Loch Maree 6030545 YP_001715955.1 CDS CLK_A0328 NC_010418.1 265535 265912 R identified by Glimmer3; putative; hypothetical protein complement(265535..265912) Clostridium botulinum A3 str. Loch Maree 6030335 YP_001715956.1 CDS CLK_A0329 NC_010418.1 266044 266466 R DNA topoisomerase III complement(266044..266466) Clostridium botulinum A3 str. Loch Maree 6030333 YP_001785336.1 CDS dnaA NC_010520.1 14 1351 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 14..1351 Clostridium botulinum A3 str. Loch Maree 6151327 YP_001785337.1 CDS dnaN NC_010520.1 1614 2717 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1614..2717 Clostridium botulinum A3 str. Loch Maree 6153647 YP_001785338.1 CDS CLK_3135 NC_010520.1 2737 2943 D identified by match to protein family HMM PF01479; match to protein family HMM TIGR02988; S4 domain-containing protein 2737..2943 Clostridium botulinum A3 str. Loch Maree 6154713 YP_001785339.1 CDS recF NC_010520.1 3012 4106 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3012..4106 Clostridium botulinum A3 str. Loch Maree 6151614 YP_001785340.1 CDS CLK_3137 NC_010520.1 4127 4390 D hypothetical protein 4127..4390 Clostridium botulinum A3 str. Loch Maree 6152391 YP_001785341.1 CDS gyrB NC_010520.1 4408 6321 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4408..6321 Clostridium botulinum A3 str. Loch Maree 6153421 YP_001785342.1 CDS gyrA NC_010520.1 6347 8842 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 6347..8842 Clostridium botulinum A3 str. Loch Maree 6153798 YP_001785343.1 CDS CLK_3149 NC_010520.1 14451 14873 D hypothetical protein 14451..14873 Clostridium botulinum A3 str. Loch Maree 6155012 YP_001785344.1 CDS CLK_3150 NC_010520.1 14889 15410 D identified by match to protein family HMM PF02829; match to protein family HMM PF08279; transcriptional regulator 14889..15410 Clostridium botulinum A3 str. Loch Maree 6152952 YP_001785345.1 CDS CLK_3151 NC_010520.1 15412 16575 D identified by match to protein family HMM PF00037; match to protein family HMM PF04015; (Fe-S)-binding protein 15412..16575 Clostridium botulinum A3 str. Loch Maree 6152169 YP_001785346.1 CDS CLK_3152 NC_010520.1 16580 19261 D identified by match to protein family HMM PF03699; hypothetical protein 16580..19261 Clostridium botulinum A3 str. Loch Maree 6154574 YP_001785347.1 CDS CLK_3153 NC_010520.1 19398 20174 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 19398..20174 Clostridium botulinum A3 str. Loch Maree 6151643 YP_001785348.1 CDS CLK_3154 NC_010520.1 20199 21596 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; oxidoreductase, FAD dependent 20199..21596 Clostridium botulinum A3 str. Loch Maree 6154717 YP_001785349.1 CDS CLK_3155 NC_010520.1 21613 21966 D identified by match to protein family HMM PF07892; hypothetical protein 21613..21966 Clostridium botulinum A3 str. Loch Maree 6153844 YP_001785350.1 CDS serS NC_010520.1 22336 23616 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 22336..23616 Clostridium botulinum A3 str. Loch Maree 6152554 YP_001785351.1 CDS psd NC_010520.1 24798 25685 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(24798..25685) Clostridium botulinum A3 str. Loch Maree 6155036 YP_001785352.1 CDS CLK_3159 NC_010520.1 25797 27395 R identified by match to protein family HMM PF03109; hypothetical protein complement(25797..27395) Clostridium botulinum A3 str. Loch Maree 6152923 YP_001785353.1 CDS CLK_3160 NC_010520.1 27471 27791 R hypothetical protein complement(27471..27791) Clostridium botulinum A3 str. Loch Maree 6151349 YP_001785354.1 CDS CLK_3162 NC_010520.1 28186 29736 D identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; sensory box sigma-54 dependent transcriptional regulator 28186..29736 Clostridium botulinum A3 str. Loch Maree 6155013 YP_001785355.1 CDS megL NC_010520.1 29896 31098 D catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 29896..31098 Clostridium botulinum A3 str. Loch Maree 6152929 YP_001785356.1 CDS CLK_3164 NC_010520.1 31222 31659 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase 31222..31659 Clostridium botulinum A3 str. Loch Maree 6152395 YP_001785357.1 CDS dnaX NC_010520.1 32304 33929 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 32304..33929 Clostridium botulinum A3 str. Loch Maree 6155011 YP_001785358.1 CDS CLK_3166 NC_010520.1 33994 34335 D identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 33994..34335 Clostridium botulinum A3 str. Loch Maree 6153550 YP_001785359.1 CDS recR NC_010520.1 34368 34964 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 34368..34964 Clostridium botulinum A3 str. Loch Maree 6152290 YP_001785360.1 CDS CLK_3168 NC_010520.1 35021 35284 D hypothetical protein 35021..35284 Clostridium botulinum A3 str. Loch Maree 6151626 YP_001785361.1 CDS bofA NC_010520.1 35434 35694 D identified by match to protein family HMM PF07441; match to protein family HMM TIGR02862; sigma-K factor processing regulatory protein BofA 35434..35694 Clostridium botulinum A3 str. Loch Maree 6154731 YP_001785362.1 CDS sfsA NC_010520.1 35845 36537 D Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 35845..36537 Clostridium botulinum A3 str. Loch Maree 6154053 YP_001785363.1 CDS CLK_3171 NC_010520.1 36593 37081 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 36593..37081 Clostridium botulinum A3 str. Loch Maree 6152768 YP_001785364.1 CDS CLK_3172 NC_010520.1 37199 37921 D hypothetical protein 37199..37921 Clostridium botulinum A3 str. Loch Maree 6154535 YP_001785365.1 CDS CLK_3173 NC_010520.1 38055 38840 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 38055..38840 Clostridium botulinum A3 str. Loch Maree 6153498 YP_001785366.1 CDS CLK_3174 NC_010520.1 38859 39020 D hypothetical protein 38859..39020 Clostridium botulinum A3 str. Loch Maree 6154524 YP_001785367.1 CDS CLK_3175 NC_010520.1 39403 40107 D identified by match to protein family HMM PF00899; ThiF domain-containing protein 39403..40107 Clostridium botulinum A3 str. Loch Maree 6153387 YP_001785368.1 CDS CLK_3176 NC_010520.1 40190 41299 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 40190..41299 Clostridium botulinum A3 str. Loch Maree 6152729 YP_001785369.1 CDS CLK_3177 NC_010520.1 41328 42272 D identified by match to protein family HMM PF00583; acetyltransferase 41328..42272 Clostridium botulinum A3 str. Loch Maree 6154009 YP_001785370.1 CDS CLK_3185 NC_010520.1 47738 48334 R identified by match to protein family HMM PF03167; uracil-DNA glycosylase complement(47738..48334) Clostridium botulinum A3 str. Loch Maree 6155046 YP_001785371.1 CDS CLK_3193 NC_010520.1 54428 54991 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 54428..54991 Clostridium botulinum A3 str. Loch Maree 6155062 YP_001785372.1 CDS CLK_3194 NC_010520.1 54988 56430 D hypothetical protein 54988..56430 Clostridium botulinum A3 str. Loch Maree 6153541 YP_001785373.1 CDS CLK_3203 NC_010520.1 62211 62351 D identified by Glimmer3; hypothetical protein 62211..62351 Clostridium botulinum A3 str. Loch Maree 6155020 YP_001785374.1 CDS CLK_3204 NC_010520.1 62683 63105 D hypothetical protein 62683..63105 Clostridium botulinum A3 str. Loch Maree 6154148 YP_001785375.1 CDS CLK_3205 NC_010520.1 63247 63360 D identified by Glimmer3; hypothetical protein 63247..63360 Clostridium botulinum A3 str. Loch Maree 6151616 YP_001785376.1 CDS CLK_3214 NC_010520.1 69094 69837 D identified by match to protein family HMM PF00639; peptidil-prolyl isomerase 69094..69837 Clostridium botulinum A3 str. Loch Maree 6155028 YP_001785377.1 CDS CLK_3222 NC_010520.1 75284 75463 D sodium transporter family protein 75284..75463 Clostridium botulinum A3 str. Loch Maree 6155080 YP_001785378.1 CDS CLK_3223 NC_010520.1 75522 76265 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 75522..76265 Clostridium botulinum A3 str. Loch Maree 6151510 YP_001785379.1 CDS CLK_3225 NC_010520.1 76451 77359 R identified by match to protein family HMM PF02016; LD-carboxypeptidase complement(76451..77359) Clostridium botulinum A3 str. Loch Maree 6155044 YP_001785380.1 CDS CLK_3226 NC_010520.1 77395 78336 R identified by match to protein family HMM PF01544; CorA family protein complement(77395..78336) Clostridium botulinum A3 str. Loch Maree 6151439 YP_001785381.1 CDS CLK_3227 NC_010520.1 78701 79204 D hypothetical protein 78701..79204 Clostridium botulinum A3 str. Loch Maree 6154907 YP_001785382.1 CDS CLK_3228 NC_010520.1 79209 80369 R amidohydrolase complement(79209..80369) Clostridium botulinum A3 str. Loch Maree 6153975 YP_001785383.1 CDS CLK_3229 NC_010520.1 80623 80835 D hypothetical protein 80623..80835 Clostridium botulinum A3 str. Loch Maree 6151544 YP_001785384.1 CDS CLK_3230 NC_010520.1 80814 82262 D identified by match to protein family HMM PF01276; match to protein family HMM PF03711; Orn/Lys/Arg decarboxylase 80814..82262 Clostridium botulinum A3 str. Loch Maree 6152632 YP_001785385.1 CDS CLK_3231 NC_010520.1 82286 82981 D identified by match to protein family HMM PF02223; thymidylate kinase 82286..82981 Clostridium botulinum A3 str. Loch Maree 6153211 YP_001785386.1 CDS CLK_3232 NC_010520.1 83062 83391 D identified by match to protein family HMM PF06153; hypothetical protein 83062..83391 Clostridium botulinum A3 str. Loch Maree 6154263 YP_001785387.1 CDS CLK_3233 NC_010520.1 83409 84353 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 83409..84353 Clostridium botulinum A3 str. Loch Maree 6154450 YP_001785388.1 CDS CLK_3234 NC_010520.1 84355 85269 D identified by match to protein family HMM PF04468; PSP1 domain-containing protein 84355..85269 Clostridium botulinum A3 str. Loch Maree 6151357 YP_001785389.1 CDS CLK_3235 NC_010520.1 85281 85484 D hypothetical protein 85281..85484 Clostridium botulinum A3 str. Loch Maree 6153582 YP_001785390.1 CDS CLK_3236 NC_010520.1 85566 85736 D identified by match to protein family HMM PF00037; ferredoxin, 4Fe-4S 85566..85736 Clostridium botulinum A3 str. Loch Maree 6154534 YP_001785391.1 CDS CLK_3237 NC_010520.1 85857 86597 D hypothetical protein 85857..86597 Clostridium botulinum A3 str. Loch Maree 6151468 YP_001785392.1 CDS CLK_3238 NC_010520.1 86617 87471 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase 86617..87471 Clostridium botulinum A3 str. Loch Maree 6153122 YP_001785393.1 CDS CLK_3239 NC_010520.1 87627 88730 D identified by match to protein family HMM PF00877; NlpC/P60 family protein 87627..88730 Clostridium botulinum A3 str. Loch Maree 6153573 YP_001785394.1 CDS CLK_3240 NC_010520.1 88829 89074 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator complement(88829..89074) Clostridium botulinum A3 str. Loch Maree 6154544 YP_001785395.1 CDS CLK_3241 NC_010520.1 89880 90491 D identified by match to protein family HMM PF08876; hypothetical protein 89880..90491 Clostridium botulinum A3 str. Loch Maree 6154560 YP_001785396.1 CDS arcA NC_010520.1 90913 92124 D identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078; arginine deiminase 90913..92124 Clostridium botulinum A3 str. Loch Maree 6152773 YP_001785397.1 CDS ispF NC_010520.1 92210 92677 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(92210..92677) Clostridium botulinum A3 str. Loch Maree 6153858 YP_001785398.1 CDS CLK_3244 NC_010520.1 93413 94282 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 93413..94282 Clostridium botulinum A3 str. Loch Maree 6154931 YP_001785399.1 CDS CLK_3245 NC_010520.1 94551 94793 R hypothetical protein complement(94551..94793) Clostridium botulinum A3 str. Loch Maree 6154280 YP_001785400.1 CDS spmA NC_010520.1 94913 95488 D identified by match to protein family HMM PF07670; spore maturation protein A 94913..95488 Clostridium botulinum A3 str. Loch Maree 6152991 YP_001785401.1 CDS CLK_3247 NC_010520.1 95501 96019 D identified by match to protein family HMM PF07670; spore maturation protein B 95501..96019 Clostridium botulinum A3 str. Loch Maree 6152155 YP_001785402.1 CDS CLK_3248 NC_010520.1 96264 97601 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(96264..97601) Clostridium botulinum A3 str. Loch Maree 6154645 YP_001785403.1 CDS udgA NC_010520.1 97745 98317 D identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase 97745..98317 Clostridium botulinum A3 str. Loch Maree 6153724 YP_001785404.1 CDS CLK_3250 NC_010520.1 98346 98780 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 98346..98780 Clostridium botulinum A3 str. Loch Maree 6153155 YP_001785405.1 CDS metG NC_010520.1 99161 101098 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 99161..101098 Clostridium botulinum A3 str. Loch Maree 6152017 YP_001785406.1 CDS CLK_3252 NC_010520.1 101263 102768 D identified by match to protein family HMM PF04286; hypothetical protein 101263..102768 Clostridium botulinum A3 str. Loch Maree 6151472 YP_001785407.1 CDS CLK_3253 NC_010520.1 102919 103713 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 102919..103713 Clostridium botulinum A3 str. Loch Maree 6152002 YP_001785408.1 CDS CLK_3254 NC_010520.1 103940 104998 D identified by match to protein family HMM PF03990; match to protein family HMM PF06725; match to protein family HMM PF07501; hypothetical protein 103940..104998 Clostridium botulinum A3 str. Loch Maree 6152796 YP_001785409.1 CDS CLK_3255 NC_010520.1 105071 105616 D identified by match to protein family HMM PF01751; match to protein family HMM TIGR00334; primase-like protein 105071..105616 Clostridium botulinum A3 str. Loch Maree 6153875 YP_001785410.1 CDS ksgA NC_010520.1 105618 106445 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 105618..106445 Clostridium botulinum A3 str. Loch Maree 6154570 YP_001785411.1 CDS CLK_3257 NC_010520.1 106524 107747 D hypothetical protein 106524..107747 Clostridium botulinum A3 str. Loch Maree 6154612 YP_001785412.1 CDS CLK_3258 NC_010520.1 107904 108491 D hypothetical protein 107904..108491 Clostridium botulinum A3 str. Loch Maree 6151862 YP_001785413.1 CDS CLK_3259 NC_010520.1 108659 109492 D lipoprotein 108659..109492 Clostridium botulinum A3 str. Loch Maree 6152400 YP_001785414.1 CDS CLK_3260 NC_010520.1 109660 110721 D identified by match to protein family HMM TIGR01730; RND family marcrolide efflux protein 109660..110721 Clostridium botulinum A3 str. Loch Maree 6153460 YP_001785415.1 CDS CLK_3261 NC_010520.1 110732 111427 D identified by match to protein family HMM PF00005; macrolide efflux ABC transporter ATP-binding protein 110732..111427 Clostridium botulinum A3 str. Loch Maree 6152990 YP_001785416.1 CDS CLK_3262 NC_010520.1 111424 112632 D identified by match to protein family HMM PF02687; macrolide efflux ABC transporter permease 111424..112632 Clostridium botulinum A3 str. Loch Maree 6151790 YP_001785417.1 CDS CLK_3263 NC_010520.1 112714 113556 D ATPase 112714..113556 Clostridium botulinum A3 str. Loch Maree 6154966 YP_001785418.1 CDS CLK_3264 NC_010520.1 113696 113887 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 113696..113887 Clostridium botulinum A3 str. Loch Maree 6153934 YP_001785419.1 CDS CLK_3265 NC_010520.1 114332 114508 R identified by Glimmer3; hypothetical protein complement(114332..114508) Clostridium botulinum A3 str. Loch Maree 6151464 YP_001785420.1 CDS CLK_3266 NC_010520.1 114586 115656 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 114586..115656 Clostridium botulinum A3 str. Loch Maree 6154359 YP_001785421.1 CDS CLK_3267 NC_010520.1 115713 116441 D identified by match to protein family HMM PF02308; mgtC family protein 115713..116441 Clostridium botulinum A3 str. Loch Maree 6153478 YP_001785422.1 CDS nrdD NC_010520.1 116731 118872 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 116731..118872 Clostridium botulinum A3 str. Loch Maree 6152428 YP_001785423.1 CDS nrdG NC_010520.1 118889 119404 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 118889..119404 Clostridium botulinum A3 str. Loch Maree 6153919 YP_001785424.1 CDS CLK_3270 NC_010520.1 119656 119802 R identified by Glimmer3; hypothetical protein complement(119656..119802) Clostridium botulinum A3 str. Loch Maree 6152836 YP_001785425.1 CDS CLK_3271 NC_010520.1 119936 120616 R hypothetical protein complement(119936..120616) Clostridium botulinum A3 str. Loch Maree 6151537 YP_001785426.1 CDS CLK_3272 NC_010520.1 120618 120956 R identified by match to protein family HMM PF03551; PadR family transcriptional regulator complement(120618..120956) Clostridium botulinum A3 str. Loch Maree 6154197 YP_001785427.1 CDS CLK_3273 NC_010520.1 121077 121715 R zinc-dependent hydrolase complement(121077..121715) Clostridium botulinum A3 str. Loch Maree 6153621 YP_001785428.1 CDS ileS NC_010520.1 122157 125273 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 122157..125273 Clostridium botulinum A3 str. Loch Maree 6152479 YP_001785429.1 CDS CLK_3275 NC_010520.1 125424 126422 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 125424..126422 Clostridium botulinum A3 str. Loch Maree 6152888 YP_001785430.1 CDS CLK_3276 NC_010520.1 126638 130690 D hypothetical protein 126638..130690 Clostridium botulinum A3 str. Loch Maree 6153793 YP_001785431.1 CDS CLK_3277 NC_010520.1 130765 131832 D identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 130765..131832 Clostridium botulinum A3 str. Loch Maree 6153040 YP_001785432.1 CDS CLK_3278 NC_010520.1 132168 133481 D identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; hypothetical protein 132168..133481 Clostridium botulinum A3 str. Loch Maree 6153390 YP_001785433.1 CDS CLK_3279 NC_010520.1 133486 134292 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 133486..134292 Clostridium botulinum A3 str. Loch Maree 6154188 YP_001785434.1 CDS CLK_3280 NC_010520.1 134312 135058 D hypothetical protein 134312..135058 Clostridium botulinum A3 str. Loch Maree 6151594 YP_001785435.1 CDS CLK_3281 NC_010520.1 135283 136665 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 135283..136665 Clostridium botulinum A3 str. Loch Maree 6151951 YP_001785436.1 CDS CLK_3282 NC_010520.1 136852 138126 D identified by match to protein family HMM PF01547; sugar-binding protein 136852..138126 Clostridium botulinum A3 str. Loch Maree 6152771 YP_001785437.1 CDS CLK_3283 NC_010520.1 138227 139342 R identified by match to protein family HMM PF00534; mannosyltransferase complement(138227..139342) Clostridium botulinum A3 str. Loch Maree 6154051 YP_001785438.1 CDS CLK_3284 NC_010520.1 139506 140516 D identified by match to protein family HMM TIGR02906; spore coat protein 139506..140516 Clostridium botulinum A3 str. Loch Maree 6154792 YP_001785439.1 CDS CLK_3285 NC_010520.1 140531 140725 D identified by Glimmer3; hypothetical protein 140531..140725 Clostridium botulinum A3 str. Loch Maree 6151536 YP_001785440.1 CDS CLK_3286 NC_010520.1 140752 141519 D hypothetical protein 140752..141519 Clostridium botulinum A3 str. Loch Maree 6154458 YP_001785441.1 CDS CLK_3287 NC_010520.1 141532 142545 D identified by match to protein family HMM TIGR02906; spore coat protein 141532..142545 Clostridium botulinum A3 str. Loch Maree 6152713 YP_001785442.1 CDS CLK_3288 NC_010520.1 142720 143847 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(142720..143847) Clostridium botulinum A3 str. Loch Maree 6151902 YP_001785443.1 CDS cotS NC_010520.1 143964 144968 D identified by match to protein family HMM TIGR02906; spore coat protein CotS 143964..144968 Clostridium botulinum A3 str. Loch Maree 6154868 YP_001785444.1 CDS CLK_3290 NC_010520.1 145092 145994 D identified by match to protein family HMM PF05582; match to protein family HMM TIGR02855; peptidase 145092..145994 Clostridium botulinum A3 str. Loch Maree 6154095 YP_001785445.1 CDS CLK_3291 NC_010520.1 145987 146154 D identified by Glimmer3; hypothetical protein 145987..146154 Clostridium botulinum A3 str. Loch Maree 6152595 YP_001785446.1 CDS CLK_3292 NC_010520.1 146190 146426 D identified by match to protein family HMM PF06257; hypothetical protein 146190..146426 Clostridium botulinum A3 str. Loch Maree 6151354 YP_001785447.1 CDS CLK_3293 NC_010520.1 146530 148092 D identified by match to protein family HMM PF01476; LysM domain-containing protein 146530..148092 Clostridium botulinum A3 str. Loch Maree 6154406 YP_001785448.1 CDS cphB NC_010520.1 148290 149090 D identified by match to protein family HMM PF03575; match to protein family HMM TIGR02069; cyanophycinase 148290..149090 Clostridium botulinum A3 str. Loch Maree 6153327 YP_001785449.1 CDS cphA NC_010520.1 149134 151755 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 149134..151755 Clostridium botulinum A3 str. Loch Maree 6152740 YP_001785450.1 CDS ipk NC_010520.1 151848 152690 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 151848..152690 Clostridium botulinum A3 str. Loch Maree 6153950 YP_001785451.1 CDS CLK_3297 NC_010520.1 152986 153183 D identified by Glimmer3; hypothetical protein 152986..153183 Clostridium botulinum A3 str. Loch Maree 6151517 YP_001785452.1 CDS CLK_3298 NC_010520.1 153244 154764 D identified by match to protein family HMM PF03323; spore germination protein 153244..154764 Clostridium botulinum A3 str. Loch Maree 6152298 YP_001785453.1 CDS CLK_3299 NC_010520.1 154784 155881 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 154784..155881 Clostridium botulinum A3 str. Loch Maree 6153570 YP_001785454.1 CDS CLK_3300 NC_010520.1 155931 157112 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; Ger(x)C family germination protein 155931..157112 Clostridium botulinum A3 str. Loch Maree 6154349 YP_001785455.1 CDS CLK_3301 NC_010520.1 157186 157818 D identified by match to protein family HMM TIGR02837; stage II sporulation protein R 157186..157818 Clostridium botulinum A3 str. Loch Maree 6151926 YP_001785456.1 CDS CLK_3302 NC_010520.1 157855 159096 R identified by match to protein family HMM PF04101; match to protein family HMM PF06925; hypothetical protein complement(157855..159096) Clostridium botulinum A3 str. Loch Maree 6152968 YP_001785457.1 CDS ypeB NC_010520.1 159469 160839 D identified by match to protein family HMM PF03413; match to protein family HMM TIGR02889; germination protein YpeB 159469..160839 Clostridium botulinum A3 str. Loch Maree 6154198 YP_001785458.1 CDS CLK_3304 NC_010520.1 160942 161922 D identified by match to protein family HMM PF02568; hypothetical protein 160942..161922 Clostridium botulinum A3 str. Loch Maree 6154986 YP_001785459.1 CDS CLK_3305 NC_010520.1 161947 162375 D identified by match to protein family HMM PF09148; hypothetical protein 161947..162375 Clostridium botulinum A3 str. Loch Maree 6153159 YP_001785460.1 CDS CLK_3306 NC_010520.1 162507 162806 D hypothetical protein 162507..162806 Clostridium botulinum A3 str. Loch Maree 6152070 YP_001785461.1 CDS pyrG NC_010520.1 163040 164641 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 163040..164641 Clostridium botulinum A3 str. Loch Maree 6153121 YP_001785462.1 CDS CLK_3308 NC_010520.1 164908 165252 D hypothetical protein 164908..165252 Clostridium botulinum A3 str. Loch Maree 6152027 YP_001785463.1 CDS rho NC_010520.1 165424 166869 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 165424..166869 Clostridium botulinum A3 str. Loch Maree 6153379 YP_001785464.1 CDS rpmE NC_010520.1 166909 167127 R identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 complement(166909..167127) Clostridium botulinum A3 str. Loch Maree 6152288 YP_001785465.1 CDS tdk NC_010520.1 167354 167929 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 167354..167929 Clostridium botulinum A3 str. Loch Maree 6151777 YP_001785466.1 CDS CLK_3312 NC_010520.1 167946 168863 D identified by match to protein family HMM PF07136; hypothetical protein 167946..168863 Clostridium botulinum A3 str. Loch Maree 6154631 YP_001785467.1 CDS CLK_3313 NC_010520.1 168871 169722 D identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387; HemK family modification methylase 168871..169722 Clostridium botulinum A3 str. Loch Maree 6153867 YP_001785468.1 CDS prfA NC_010520.1 169804 170880 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 169804..170880 Clostridium botulinum A3 str. Loch Maree 6152993 YP_001785469.1 CDS CLK_3315 NC_010520.1 170908 171516 D hypothetical protein 170908..171516 Clostridium botulinum A3 str. Loch Maree 6154345 YP_001785470.1 CDS CLK_3316 NC_010520.1 171575 172294 D identified by match to protein family HMM PF02535; ZIP transporter family protein 171575..172294 Clostridium botulinum A3 str. Loch Maree 6151420 YP_001785471.1 CDS CLK_3317 NC_010520.1 172315 173370 D identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 172315..173370 Clostridium botulinum A3 str. Loch Maree 6153765 YP_001785472.1 CDS CLK_3318 NC_010520.1 173379 173831 D identified by match to protein family HMM PF01451; low molecular weight protein tyrosine phosphatase 173379..173831 Clostridium botulinum A3 str. Loch Maree 6154659 YP_001785473.1 CDS rpiB NC_010520.1 173891 174328 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 173891..174328 Clostridium botulinum A3 str. Loch Maree 6152165 YP_001785474.1 CDS upp NC_010520.1 174358 174987 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 174358..174987 Clostridium botulinum A3 str. Loch Maree 6152948 YP_001785475.1 CDS CLK_3321 NC_010520.1 175501 175989 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase 175501..175989 Clostridium botulinum A3 str. Loch Maree 6153307 YP_001785476.1 CDS tagO NC_010520.1 176097 177131 D identified by match to protein family HMM PF00953; UDP-GlcNAc:undecaprenyl-P GlcNAc 1-P transferase 176097..177131 Clostridium botulinum A3 str. Loch Maree 6154332 YP_001785477.1 CDS mnaA NC_010520.1 177145 178302 D identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 177145..178302 Clostridium botulinum A3 str. Loch Maree 6154940 YP_001785478.1 CDS CLK_3324 NC_010520.1 178794 179162 D ATP synthase I 178794..179162 Clostridium botulinum A3 str. Loch Maree 6152266 YP_001785479.1 CDS atpB NC_010520.1 179177 179857 D Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 179177..179857 Clostridium botulinum A3 str. Loch Maree 6152668 YP_001785480.1 CDS atpE NC_010520.1 179897 180136 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 179897..180136 Clostridium botulinum A3 str. Loch Maree 6151577 YP_001785481.1 CDS atpF NC_010520.1 180212 180691 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel; ATP synthase F0F1 subunit B 180212..180691 Clostridium botulinum A3 str. Loch Maree 6151573 YP_001785482.1 CDS atpH NC_010520.1 180694 181233 D Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 180694..181233 Clostridium botulinum A3 str. Loch Maree 6154224 YP_001785483.1 CDS atpA NC_010520.1 181244 182758 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 181244..182758 Clostridium botulinum A3 str. Loch Maree 6153113 YP_001785484.1 CDS atpG NC_010520.1 182780 183628 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 182780..183628 Clostridium botulinum A3 str. Loch Maree 6152306 YP_001785485.1 CDS atpD NC_010520.1 183642 185033 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 183642..185033 Clostridium botulinum A3 str. Loch Maree 6153718 YP_001785486.1 CDS atpC NC_010520.1 185058 185459 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon 185058..185459 Clostridium botulinum A3 str. Loch Maree 6152872 YP_001785487.1 CDS CLK_3333 NC_010520.1 185654 186361 D hypothetical protein 185654..186361 Clostridium botulinum A3 str. Loch Maree 6151449 YP_001785488.1 CDS murA NC_010520.1 186385 187641 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 186385..187641 Clostridium botulinum A3 str. Loch Maree 6154328 YP_001785489.1 CDS spoIID NC_010520.1 187887 188963 D identified by match to protein family HMM PF08486; match to protein family HMM TIGR02669; match to protein family HMM TIGR02870; stage II sporulation protein D 187887..188963 Clostridium botulinum A3 str. Loch Maree 6152031 YP_001785490.1 CDS CLK_3336 NC_010520.1 189368 190096 D identified by match to protein family HMM PF01551; peptidase 189368..190096 Clostridium botulinum A3 str. Loch Maree 6154238 YP_001785491.1 CDS spoIIID NC_010520.1 190204 190458 D identified by match to protein family HMM TIGR02844; stage III sporulation protein D 190204..190458 Clostridium botulinum A3 str. Loch Maree 6152405 YP_001785492.1 CDS CLK_3338 NC_010520.1 190558 191586 D identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; rod shape-determining protein Mbl 190558..191586 Clostridium botulinum A3 str. Loch Maree 6151384 YP_001785493.1 CDS CLK_3339 NC_010520.1 191711 192235 R identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; hypothetical protein complement(191711..192235) Clostridium botulinum A3 str. Loch Maree 6152216 YP_001785494.1 CDS CLK_3340 NC_010520.1 192284 193006 R identified by match to protein family HMM PF01171; hypothetical protein complement(192284..193006) Clostridium botulinum A3 str. Loch Maree 6154658 YP_001785495.1 CDS CLK_3345 NC_010520.1 193774 193908 D identified by Glimmer3; hypothetical protein 193774..193908 Clostridium botulinum A3 str. Loch Maree 6155045 YP_001785496.1 CDS metK NC_010520.1 193992 195167 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 193992..195167 Clostridium botulinum A3 str. Loch Maree 6153174 YP_001785497.1 CDS CLK_3347 NC_010520.1 195358 197592 D identified by match to protein family HMM TIGR01448; recombinase D 195358..197592 Clostridium botulinum A3 str. Loch Maree 6153079 YP_001785498.1 CDS CLK_3348 NC_010520.1 197618 198640 D hypothetical protein 197618..198640 Clostridium botulinum A3 str. Loch Maree 6152394 YP_001785499.1 CDS CLK_3349 NC_010520.1 198613 199290 D identified by match to protein family HMM PF00156; ComF-like protein 198613..199290 Clostridium botulinum A3 str. Loch Maree 6153225 YP_001785500.1 CDS yfiA NC_010520.1 199715 200242 D identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 199715..200242 Clostridium botulinum A3 str. Loch Maree 6153679 YP_001785501.1 CDS secA NC_010520.1 200470 202977 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 200470..202977 Clostridium botulinum A3 str. Loch Maree 6154702 YP_001785502.1 CDS prfB NC_010520.1 203341 204324 D catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 203341..204324 Clostridium botulinum A3 str. Loch Maree 6152101 YP_001785503.1 CDS CLK_3353 NC_010520.1 204621 205973 R identified by match to protein family HMM PF04389; peptidase complement(204621..205973) Clostridium botulinum A3 str. Loch Maree 6153119 YP_001785504.1 CDS CLK_3354 NC_010520.1 206081 208237 D identified by match to protein family HMM PF00575; RNA-binding protein 206081..208237 Clostridium botulinum A3 str. Loch Maree 6153214 YP_001785505.1 CDS CLK_3355 NC_010520.1 208522 209115 D riboflavin transporter 208522..209115 Clostridium botulinum A3 str. Loch Maree 6154187 YP_001785506.1 CDS CLK_3356 NC_010520.1 209477 211126 D hypothetical protein 209477..211126 Clostridium botulinum A3 str. Loch Maree 6151525 YP_001785507.1 CDS CLK_3357 NC_010520.1 211147 211407 D hypothetical protein 211147..211407 Clostridium botulinum A3 str. Loch Maree 6152651 YP_001785508.1 CDS CLK_3358 NC_010520.1 211421 212107 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 211421..212107 Clostridium botulinum A3 str. Loch Maree 6154910 YP_001785509.1 CDS CLK_3359 NC_010520.1 212191 212472 D identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 212191..212472 Clostridium botulinum A3 str. Loch Maree 6153907 YP_001785510.1 CDS CLK_3360 NC_010520.1 212512 214965 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF01206; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 212512..214965 Clostridium botulinum A3 str. Loch Maree 6151499 YP_001785511.1 CDS CLK_3361 NC_010520.1 214993 215847 R hypothetical protein complement(214993..215847) Clostridium botulinum A3 str. Loch Maree 6154164 YP_001785512.1 CDS CLK_3362 NC_010520.1 216004 216792 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 216004..216792 Clostridium botulinum A3 str. Loch Maree 6153056 YP_001785513.1 CDS CLK_3363 NC_010520.1 216943 217056 D identified by Glimmer3; hypothetical protein 216943..217056 Clostridium botulinum A3 str. Loch Maree 6152022 YP_001785514.1 CDS leuS NC_010520.1 217096 219537 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(217096..219537) Clostridium botulinum A3 str. Loch Maree 6151982 YP_001785515.1 CDS CLK_3365 NC_010520.1 219938 220342 R identified by match to protein family HMM PF00581; hypothetical protein complement(219938..220342) Clostridium botulinum A3 str. Loch Maree 6154860 YP_001785516.1 CDS CLK_3367 NC_010520.1 220637 221161 R hypothetical protein complement(220637..221161) Clostridium botulinum A3 str. Loch Maree 6155010 YP_001785517.1 CDS CLK_3368 NC_010520.1 221186 221785 R identified by match to protein family HMM PF00226; match to protein family HMM PF07719; DnaJ family molecular chaperone complement(221186..221785) Clostridium botulinum A3 str. Loch Maree 6152616 YP_001785518.1 CDS CLK_3369 NC_010520.1 221772 222647 R hypothetical protein complement(221772..222647) Clostridium botulinum A3 str. Loch Maree 6151411 YP_001785519.1 CDS CLK_3370 NC_010520.1 222651 223190 R identified by match to protein family HMM PF01928; adenylyl cyclase CyaB complement(222651..223190) Clostridium botulinum A3 str. Loch Maree 6152414 YP_001785520.1 CDS CLK_3371 NC_010520.1 223497 224534 D hypothetical protein 223497..224534 Clostridium botulinum A3 str. Loch Maree 6152934 YP_001785521.1 CDS fba NC_010520.1 224815 225741 R identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859; fructose-1,6-bisphosphate aldolase complement(224815..225741) Clostridium botulinum A3 str. Loch Maree 6154021 YP_001785522.1 CDS CLK_3373 NC_010520.1 225967 226251 R hypothetical protein complement(225967..226251) Clostridium botulinum A3 str. Loch Maree 6154589 YP_001785523.1 CDS CLK_3374 NC_010520.1 226368 227036 R identified by match to protein family HMM PF04239; hypothetical protein complement(226368..227036) Clostridium botulinum A3 str. Loch Maree 6151843 YP_001785524.1 CDS CLK_3375 NC_010520.1 227161 228819 D identified by match to protein family HMM PF00485; threonyl-tRNA synthetase/uridine kinase 227161..228819 Clostridium botulinum A3 str. Loch Maree 6154066 YP_001785525.1 CDS CLK_3376 NC_010520.1 229484 229645 D identified by Glimmer3; hypothetical protein 229484..229645 Clostridium botulinum A3 str. Loch Maree 6151364 YP_001785526.1 CDS pssA NC_010520.1 229717 230238 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(229717..230238) Clostridium botulinum A3 str. Loch Maree 6151964 YP_001785527.1 CDS CLK_3378 NC_010520.1 230425 230841 D identified by match to protein family HMM PF00571; hypothetical protein 230425..230841 Clostridium botulinum A3 str. Loch Maree 6153052 YP_001785528.1 CDS CLK_3379 NC_010520.1 230947 231831 D similar to YegS from E. coli; lipid kinase 230947..231831 Clostridium botulinum A3 str. Loch Maree 6154622 YP_001785529.1 CDS CLK_3380 NC_010520.1 231905 232549 D hypothetical protein 231905..232549 Clostridium botulinum A3 str. Loch Maree 6152199 YP_001785530.1 CDS CLK_3381 NC_010520.1 232641 234578 R identified by match to protein family HMM PF04055; match to protein family HMM PF08497; hypothetical protein complement(232641..234578) Clostridium botulinum A3 str. Loch Maree 6153012 YP_001785531.1 CDS CLK_3382 NC_010520.1 235173 236438 D identified by match to protein family HMM PF00571; match to protein family HMM PF03448; match to protein family HMM PF05239; PRC-barrel domain/MgtE domain/CBS domain-containing protein 235173..236438 Clostridium botulinum A3 str. Loch Maree 6153346 YP_001785532.1 CDS sleB NC_010520.1 236663 237358 D identified by match to protein family HMM PF01471; match to protein family HMM PF07486; match to protein family HMM TIGR02869; spore-cortex-lytic enzyme 236663..237358 Clostridium botulinum A3 str. Loch Maree 6154155 YP_001785533.1 CDS cysK NC_010520.1 237722 238636 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 237722..238636 Clostridium botulinum A3 str. Loch Maree 6151697 YP_001785534.1 CDS cysE NC_010520.1 238651 239247 D identified by match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 238651..239247 Clostridium botulinum A3 str. Loch Maree 6154201 YP_001785535.1 CDS CLK_3386 NC_010520.1 239269 240234 D identified by match to protein family HMM PF08331; (Fe-S)-binding protein 239269..240234 Clostridium botulinum A3 str. Loch Maree 6151746 YP_001785536.1 CDS CLK_3387 NC_010520.1 240382 241083 D identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase 240382..241083 Clostridium botulinum A3 str. Loch Maree 6152564 YP_001785537.1 CDS nth NC_010520.1 241176 241817 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 241176..241817 Clostridium botulinum A3 str. Loch Maree 6154728 YP_001785538.1 CDS CLK_3389 NC_010520.1 242201 243373 D identified by match to protein family HMM PF00390; match to protein family HMM PF03949; malic enzyme 242201..243373 Clostridium botulinum A3 str. Loch Maree 6154656 YP_001785539.1 CDS CLK_3390 NC_010520.1 243684 244154 R hypothetical protein complement(243684..244154) Clostridium botulinum A3 str. Loch Maree 6152552 YP_001785540.1 CDS CLK_3391 NC_010520.1 244302 244775 R hypothetical protein complement(244302..244775) Clostridium botulinum A3 str. Loch Maree 6153800 YP_001785541.1 CDS CLK_3392 NC_010520.1 244919 247957 D hypothetical protein 244919..247957 Clostridium botulinum A3 str. Loch Maree 6154109 YP_001785542.1 CDS CLK_3393 NC_010520.1 248151 249380 R identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00177; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A complement(248151..249380) Clostridium botulinum A3 str. Loch Maree 6151745 YP_001785543.1 CDS CLK_3394 NC_010520.1 249406 250389 R hypothetical protein complement(249406..250389) Clostridium botulinum A3 str. Loch Maree 6151601 YP_001785544.1 CDS CLK_3395 NC_010520.1 250499 251533 R identified by match to protein family HMM PF05343; glutamyl aminopeptidase complement(250499..251533) Clostridium botulinum A3 str. Loch Maree 6152602 YP_001785545.1 CDS CLK_3396 NC_010520.1 251661 252821 D identified by match to protein family HMM PF04294; von Willebrand factor A 251661..252821 Clostridium botulinum A3 str. Loch Maree 6153147 YP_001785546.1 CDS CLK_3397 NC_010520.1 253027 254379 D identified by match to protein family HMM PF04294; match to protein family HMM PF07501; von Willebrand factor A 253027..254379 Clostridium botulinum A3 str. Loch Maree 6154103 YP_001785547.1 CDS splB NC_010520.1 254526 255533 D identified by match to protein family HMM PF04055; spore photoproduct lyase 254526..255533 Clostridium botulinum A3 str. Loch Maree 6151971 YP_001785548.1 CDS CLK_3399 NC_010520.1 255842 256309 D identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; hypothetical protein 255842..256309 Clostridium botulinum A3 str. Loch Maree 6151445 YP_001785549.1 CDS CLK_3400 NC_010520.1 256322 257161 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 256322..257161 Clostridium botulinum A3 str. Loch Maree 6151765 YP_001785550.1 CDS CLK_3401 NC_010520.1 257455 258558 D identified by match to protein family HMM PF02608; Bmp family lipoprotein 257455..258558 Clostridium botulinum A3 str. Loch Maree 6153730 YP_001785551.1 CDS CLK_3402 NC_010520.1 258741 260273 D identified by match to protein family HMM PF00005; sugar ABC transporter ATP-binding protein 258741..260273 Clostridium botulinum A3 str. Loch Maree 6153311 YP_001785552.1 CDS CLK_3403 NC_010520.1 260275 261378 D identified by match to protein family HMM PF02653; sugar ABC transporter permease 260275..261378 Clostridium botulinum A3 str. Loch Maree 6152488 YP_001785553.1 CDS CLK_3404 NC_010520.1 261371 262297 D identified by match to protein family HMM PF02653; sugar ABC transporter permease 261371..262297 Clostridium botulinum A3 str. Loch Maree 6153508 YP_001785554.1 CDS CLK_3405 NC_010520.1 262409 263134 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 262409..263134 Clostridium botulinum A3 str. Loch Maree 6152438 YP_001785555.1 CDS rpoN NC_010520.1 263464 264837 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 263464..264837 Clostridium botulinum A3 str. Loch Maree 6154653 YP_001785556.1 CDS cggR NC_010520.1 265125 266156 D identified by match to protein family HMM PF04198; central glycolytic genes regulator 265125..266156 Clostridium botulinum A3 str. Loch Maree 6154479 YP_001785557.1 CDS gap NC_010520.1 266234 267241 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 266234..267241 Clostridium botulinum A3 str. Loch Maree 6153044 YP_001785558.1 CDS pgk NC_010520.1 267538 268734 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 267538..268734 Clostridium botulinum A3 str. Loch Maree 6153599 YP_001785559.1 CDS tpiA NC_010520.1 268796 269542 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 268796..269542 Clostridium botulinum A3 str. Loch Maree 6153595 YP_001785560.1 CDS gpmI NC_010520.1 269629 271158 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 269629..271158 Clostridium botulinum A3 str. Loch Maree 6154160 YP_001785561.1 CDS eno NC_010520.1 271214 272509 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 271214..272509 Clostridium botulinum A3 str. Loch Maree 6151495 YP_001785562.1 CDS secG NC_010520.1 272733 272966 D identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 272733..272966 Clostridium botulinum A3 str. Loch Maree 6153892 YP_001785563.1 CDS rnr NC_010520.1 273176 275353 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 273176..275353 Clostridium botulinum A3 str. Loch Maree 6153881 YP_001785564.1 CDS surE NC_010520.1 275754 276512 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 275754..276512 Clostridium botulinum A3 str. Loch Maree 6154975 YP_001785565.1 CDS smpB NC_010520.1 276769 277239 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 276769..277239 Clostridium botulinum A3 str. Loch Maree 6151841 YP_001785566.1 CDS CLK_3417 NC_010520.1 277379 278542 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(277379..278542) Clostridium botulinum A3 str. Loch Maree 6152868 YP_001785567.1 CDS CLK_3418 NC_010520.1 280213 280716 D identified by match to protein family HMM PF08877; MepB family protein 280213..280716 Clostridium botulinum A3 str. Loch Maree 6152523 YP_001785568.1 CDS CLK_3419 NC_010520.1 281444 282775 D identified by match to protein family HMM PF01565; match to protein family HMM PF08031; FAD-binding protein 281444..282775 Clostridium botulinum A3 str. Loch Maree 6152885 YP_001785569.1 CDS CLK_3420 NC_010520.1 282946 283170 R hypothetical protein complement(282946..283170) Clostridium botulinum A3 str. Loch Maree 6152689 YP_001785570.1 CDS CLK_3421 NC_010520.1 283448 283996 D hypothetical protein 283448..283996 Clostridium botulinum A3 str. Loch Maree 6153281 YP_001785571.1 CDS CLK_3422 NC_010520.1 284432 284716 R GntR family transcriptional regulator complement(284432..284716) Clostridium botulinum A3 str. Loch Maree 6153916 YP_001785572.1 CDS CLK_3423 NC_010520.1 284992 286416 D identified by match to protein family HMM PF00282; amino acid decarboxylase 284992..286416 Clostridium botulinum A3 str. Loch Maree 6154934 YP_001785573.1 CDS CLK_3424 NC_010520.1 286603 287454 D identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin protein 286603..287454 Clostridium botulinum A3 str. Loch Maree 6153142 YP_001785574.1 CDS CLK_3425 NC_010520.1 287814 289433 D identified by match to protein family HMM PF01569; vanadium-dependent haloperoxidase 287814..289433 Clostridium botulinum A3 str. Loch Maree 6153781 YP_001785575.1 CDS CLK_3426 NC_010520.1 289923 290579 D identified by match to protein family HMM PF07883; hypothetical protein 289923..290579 Clostridium botulinum A3 str. Loch Maree 6154375 YP_001785576.1 CDS CLK_3427 NC_010520.1 291244 292353 D hypothetical protein 291244..292353 Clostridium botulinum A3 str. Loch Maree 6151705 YP_001785577.1 CDS lysP NC_010520.1 292900 294363 D identified by match to protein family HMM PF00324; lysine-specific permease 292900..294363 Clostridium botulinum A3 str. Loch Maree 6154708 YP_001785578.1 CDS CLK_3429 NC_010520.1 294905 295639 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 294905..295639 Clostridium botulinum A3 str. Loch Maree 6153894 YP_001785579.1 CDS CLK_3430 NC_010520.1 295779 296417 D identified by match to protein family HMM PF00132; streptogramin A acetyltransferase 295779..296417 Clostridium botulinum A3 str. Loch Maree 6151741 YP_001785580.1 CDS CLK_3431 NC_010520.1 296456 296968 D identified by match to protein family HMM PF00583; acetyltransferase 296456..296968 Clostridium botulinum A3 str. Loch Maree 6151883 YP_001785581.1 CDS CLK_3432 NC_010520.1 296996 297898 D identified by match to protein family HMM PF00583; acetyltransferase 296996..297898 Clostridium botulinum A3 str. Loch Maree 6153212 YP_001785582.1 CDS CLK_3433 NC_010520.1 298087 299016 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 298087..299016 Clostridium botulinum A3 str. Loch Maree 6154307 YP_001785583.1 CDS CLK_3434 NC_010520.1 299279 299965 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; regulatory protein VanR 299279..299965 Clostridium botulinum A3 str. Loch Maree 6152037 YP_001785584.1 CDS CLK_3435 NC_010520.1 300015 301073 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; VanS 300015..301073 Clostridium botulinum A3 str. Loch Maree 6152847 YP_001785585.1 CDS CLK_3436 NC_010520.1 301173 302036 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 301173..302036 Clostridium botulinum A3 str. Loch Maree 6153197 YP_001785586.1 CDS CLK_3437 NC_010520.1 302039 303253 D hypothetical protein 302039..303253 Clostridium botulinum A3 str. Loch Maree 6154857 YP_001785587.1 CDS CLK_3438 NC_010520.1 303261 304370 D hypothetical protein 303261..304370 Clostridium botulinum A3 str. Loch Maree 6151617 YP_001785588.1 CDS CLK_3439 NC_010520.1 304675 305349 R identified by match to protein family HMM PF00857; isochorismate family protein complement(304675..305349) Clostridium botulinum A3 str. Loch Maree 6154105 YP_001785589.1 CDS CLK_3440 NC_010520.1 305645 307975 D identified by match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase, molybdopterin-binding subunit 305645..307975 Clostridium botulinum A3 str. Loch Maree 6154759 YP_001785590.1 CDS CLK_3441 NC_010520.1 307975 308814 D identified by match to protein family HMM PF00941; xanthine dehydrogenase, FAD-binding subunit 307975..308814 Clostridium botulinum A3 str. Loch Maree 6153527 YP_001785591.1 CDS CLK_3442 NC_010520.1 308811 309284 D identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase, iron-sulfur-binding subunit 308811..309284 Clostridium botulinum A3 str. Loch Maree 6152737 YP_001785592.1 CDS CLK_3443 NC_010520.1 309684 310154 D identified by Glimmer3; hypothetical protein 309684..310154 Clostridium botulinum A3 str. Loch Maree 6151972 YP_001785593.1 CDS CLK_3444 NC_010520.1 310165 310848 D identified by match to protein family HMM PF02683; cytochrome c-type biogenesis protein CcdA 310165..310848 Clostridium botulinum A3 str. Loch Maree 6154701 YP_001785594.1 CDS CLK_3445 NC_010520.1 310870 311436 D identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534; thiol-disulfide oxidoreductase ResA 310870..311436 Clostridium botulinum A3 str. Loch Maree 6153903 YP_001785595.1 CDS CLK_3446 NC_010520.1 311461 312138 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 311461..312138 Clostridium botulinum A3 str. Loch Maree 6152550 YP_001785596.1 CDS CLK_3447 NC_010520.1 312275 313528 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 312275..313528 Clostridium botulinum A3 str. Loch Maree 6151740 YP_001785597.1 CDS CLK_3448 NC_010520.1 313639 314955 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase complement(313639..314955) Clostridium botulinum A3 str. Loch Maree 6153369 YP_001785598.1 CDS CLK_3449 NC_010520.1 315047 315658 R identified by match to protein family HMM PF00440; regulatory protein BetI complement(315047..315658) Clostridium botulinum A3 str. Loch Maree 6152732 YP_001785599.1 CDS CLK_3450 NC_010520.1 316143 318104 D identified by match to protein family HMM PF00144; beta-lactamase 316143..318104 Clostridium botulinum A3 str. Loch Maree 6151895 YP_001785600.1 CDS CLK_3451 NC_010520.1 318178 318873 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; regulatory protein VanR 318178..318873 Clostridium botulinum A3 str. Loch Maree 6154425 YP_001785601.1 CDS CLK_3452 NC_010520.1 318851 319951 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensory transduction histidine kinase 318851..319951 Clostridium botulinum A3 str. Loch Maree 6153551 YP_001785602.1 CDS CLK_3453 NC_010520.1 320357 321679 R identified by match to protein family HMM PF01565; match to protein family HMM PF08031; oxidoreductase, FAD-binding complement(320357..321679) Clostridium botulinum A3 str. Loch Maree 6152249 YP_001785603.1 CDS glvA NC_010520.1 321991 323316 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 321991..323316 Clostridium botulinum A3 str. Loch Maree 6151452 YP_001785604.1 CDS CLK_3455 NC_010520.1 323484 325007 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system maltose/glucose-specfic transporter subunit IIBC 323484..325007 Clostridium botulinum A3 str. Loch Maree 6152029 YP_001785605.1 CDS CLK_3456 NC_010520.1 325058 325825 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(325058..325825) Clostridium botulinum A3 str. Loch Maree 6154918 YP_001785606.1 CDS CLK_3457 NC_010520.1 325841 326620 R identified by match to protein family HMM PF01380; RpiR family transcriptional regulator complement(325841..326620) Clostridium botulinum A3 str. Loch Maree 6153877 YP_001785607.1 CDS CLK_3458 NC_010520.1 326895 327377 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose family transporter subunit IIA 326895..327377 Clostridium botulinum A3 str. Loch Maree 6152906 YP_001785608.1 CDS CLK_3459 NC_010520.1 327385 328251 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 327385..328251 Clostridium botulinum A3 str. Loch Maree 6152964 YP_001785609.1 CDS CLK_3460 NC_010520.1 328261 329310 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 328261..329310 Clostridium botulinum A3 str. Loch Maree 6152212 YP_001785610.1 CDS CLK_3461 NC_010520.1 329430 330200 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 329430..330200 Clostridium botulinum A3 str. Loch Maree 6154737 YP_001785611.1 CDS CLK_3462 NC_010520.1 330214 332184 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 330214..332184 Clostridium botulinum A3 str. Loch Maree 6153411 YP_001785612.1 CDS alr NC_010520.1 332424 333638 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 332424..333638 Clostridium botulinum A3 str. Loch Maree 6152627 YP_001785613.1 CDS CLK_3464 NC_010520.1 334157 335728 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system glucose/glucoside family transporter subunit IIBC 334157..335728 Clostridium botulinum A3 str. Loch Maree 6151335 YP_001785614.1 CDS glvA NC_010520.1 336044 337369 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 336044..337369 Clostridium botulinum A3 str. Loch Maree 6154261 YP_001785615.1 CDS CLK_3466 NC_010520.1 337552 338061 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose/glucoside family transporter subunit IIA 337552..338061 Clostridium botulinum A3 str. Loch Maree 6153006 YP_001785616.1 CDS CLK_3467 NC_010520.1 338346 339107 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; SIS domain-containing protein 338346..339107 Clostridium botulinum A3 str. Loch Maree 6152192 YP_001785617.1 CDS CLK_3468 NC_010520.1 339145 339264 R hypothetical protein complement(339145..339264) Clostridium botulinum A3 str. Loch Maree 6154475 YP_001785618.1 CDS CLK_3469 NC_010520.1 339576 339773 D identified by match to protein family HMM PF00313; cold shock protein 339576..339773 Clostridium botulinum A3 str. Loch Maree 6153746 YP_001785619.1 CDS CLK_3470 NC_010520.1 339919 340035 D identified by Glimmer3; hypothetical protein 339919..340035 Clostridium botulinum A3 str. Loch Maree 6154980 YP_001785620.1 CDS CLK_3471 NC_010520.1 340116 340670 D identified by match to protein family HMM PF06210; hypothetical protein 340116..340670 Clostridium botulinum A3 str. Loch Maree 6152003 YP_001785621.1 CDS CLK_3472 NC_010520.1 341106 341537 D identified by match to protein family HMM PF02082; rrf2 family protein 341106..341537 Clostridium botulinum A3 str. Loch Maree 6153326 YP_001785622.1 CDS CLK_3473 NC_010520.1 341693 342298 D identified by match to protein family HMM PF01323; 2-hydroxychromene-2-carboxylate isomerase 341693..342298 Clostridium botulinum A3 str. Loch Maree 6154114 YP_001785623.1 CDS CLK_3474 NC_010520.1 342325 342963 D identified by match to protein family HMM PF01073; hypothetical protein 342325..342963 Clostridium botulinum A3 str. Loch Maree 6151797 YP_001785624.1 CDS CLK_3475 NC_010520.1 343349 344677 D identified by match to protein family HMM PF01547; sugar ABC transporter sugar-binding protein 343349..344677 Clostridium botulinum A3 str. Loch Maree 6152844 YP_001785625.1 CDS CLK_3476 NC_010520.1 344781 345674 D identified by match to protein family HMM PF00528; binding-protein-dependent transport system inner membrane protein 344781..345674 Clostridium botulinum A3 str. Loch Maree 6154506 YP_001785626.1 CDS CLK_3477 NC_010520.1 345671 346519 D identified by match to protein family HMM PF00528; binding-protein-dependent transport system inner membrane protein 345671..346519 Clostridium botulinum A3 str. Loch Maree 6154493 YP_001785627.1 CDS CLK_3478 NC_010520.1 346520 347647 D identified by match to protein family HMM PF01208; methylcobamide:CoM methyltransferase 346520..347647 Clostridium botulinum A3 str. Loch Maree 6151572 YP_001785628.1 CDS CLK_3479 NC_010520.1 347649 348737 D identified by match to protein family HMM PF00005; match to protein family HMM PF08402; carbohydrate ABC transporter ATP-binding protein 347649..348737 Clostridium botulinum A3 str. Loch Maree 6154052 YP_001785629.1 CDS CLK_3480 NC_010520.1 349205 349966 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator 349205..349966 Clostridium botulinum A3 str. Loch Maree 6154879 YP_001785630.1 CDS CLK_3481 NC_010520.1 350085 351668 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system glucose/maltose-specfic transporter subunit IIBC 350085..351668 Clostridium botulinum A3 str. Loch Maree 6154127 YP_001785631.1 CDS glvA NC_010520.1 351934 353268 D identified by match to protein family HMM PF02056; maltose-6'-phosphate glucosidase 351934..353268 Clostridium botulinum A3 str. Loch Maree 6151389 YP_001785632.1 CDS CLK_3483 NC_010520.1 353281 353754 D identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose/maltose-specific transporter subunit IIA 353281..353754 Clostridium botulinum A3 str. Loch Maree 6152680 YP_001785633.1 CDS ilvD NC_010520.1 353892 355607 D identified by match to protein family HMM PF00920; dihydroxy-acid dehydratase 353892..355607 Clostridium botulinum A3 str. Loch Maree 6153342 YP_001785634.1 CDS eda NC_010520.1 355659 356306 D identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182; 2-dehydro-3-deoxyphosphogluconate aldolase 355659..356306 Clostridium botulinum A3 str. Loch Maree 6154102 YP_001785635.1 CDS CLK_3486 NC_010520.1 356308 357312 D identified by match to protein family HMM PF00294; 2-dehydro-3-deoxygluconokinase 356308..357312 Clostridium botulinum A3 str. Loch Maree 6151925 YP_001785636.1 CDS CLK_3487 NC_010520.1 357347 357478 R identified by Glimmer3; hypothetical protein complement(357347..357478) Clostridium botulinum A3 str. Loch Maree 6152506 YP_001785637.1 CDS ade NC_010520.1 357549 359348 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase 357549..359348 Clostridium botulinum A3 str. Loch Maree 6154086 YP_001785638.1 CDS CLK_3489 NC_010520.1 359751 360428 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 359751..360428 Clostridium botulinum A3 str. Loch Maree 6153736 YP_001785639.1 CDS CLK_3490 NC_010520.1 360428 361813 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 360428..361813 Clostridium botulinum A3 str. Loch Maree 6153141 YP_001785640.1 CDS CLK_3491 NC_010520.1 362210 363178 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 362210..363178 Clostridium botulinum A3 str. Loch Maree 6151739 YP_001785641.1 CDS CLK_3492 NC_010520.1 363162 363581 D identified by match to protein family HMM PF04138; cell wall teichoic acid glycosylation protein GtcA 363162..363581 Clostridium botulinum A3 str. Loch Maree 6154373 YP_001785642.1 CDS CLK_3493 NC_010520.1 363699 365978 D identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase 363699..365978 Clostridium botulinum A3 str. Loch Maree 6153314 YP_001785643.1 CDS CLK_3494 NC_010520.1 366319 367356 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 366319..367356 Clostridium botulinum A3 str. Loch Maree 6152264 YP_001785644.1 CDS CLK_3495 NC_010520.1 367619 368650 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 367619..368650 Clostridium botulinum A3 str. Loch Maree 6153112 YP_001785645.1 CDS CLK_3496 NC_010520.1 368653 369771 D identified by match to protein family HMM PF01032; iron ABC transporter permease 368653..369771 Clostridium botulinum A3 str. Loch Maree 6152073 YP_001785646.1 CDS CLK_3497 NC_010520.1 369773 370543 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 369773..370543 Clostridium botulinum A3 str. Loch Maree 6154453 YP_001785647.1 CDS CLK_3498 NC_010520.1 370578 371906 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 370578..371906 Clostridium botulinum A3 str. Loch Maree 6153449 YP_001785648.1 CDS CLK_3499 NC_010520.1 372051 373022 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(372051..373022) Clostridium botulinum A3 str. Loch Maree 6153769 YP_001785649.1 CDS CLK_3500 NC_010520.1 373420 374358 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 373420..374358 Clostridium botulinum A3 str. Loch Maree 6152482 YP_001785650.1 CDS CLK_3501 NC_010520.1 374560 375588 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease 374560..375588 Clostridium botulinum A3 str. Loch Maree 6152710 YP_001785651.1 CDS CLK_3502 NC_010520.1 375585 376592 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease 375585..376592 Clostridium botulinum A3 str. Loch Maree 6151942 YP_001785652.1 CDS CLK_3503 NC_010520.1 376626 377450 D identified by match to protein family HMM PF00005; ferrichrome ABC transporter ATP-binding protein 376626..377450 Clostridium botulinum A3 str. Loch Maree 6154814 YP_001785653.1 CDS CLK_3504 NC_010520.1 377447 379174 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; lipid A export ATP-binding protein/permease MsbA 377447..379174 Clostridium botulinum A3 str. Loch Maree 6152378 YP_001785654.1 CDS CLK_3505 NC_010520.1 379676 380977 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine/uracil permease 379676..380977 Clostridium botulinum A3 str. Loch Maree 6152462 YP_001785655.1 CDS xpt NC_010520.1 381000 381572 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 381000..381572 Clostridium botulinum A3 str. Loch Maree 6151428 YP_001785656.1 CDS CLK_3507 NC_010520.1 382159 382851 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 382159..382851 Clostridium botulinum A3 str. Loch Maree 6154536 YP_001785657.1 CDS CLK_3508 NC_010520.1 382864 383844 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 382864..383844 Clostridium botulinum A3 str. Loch Maree 6153506 YP_001785658.1 CDS CLK_3509 NC_010520.1 384186 385043 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 384186..385043 Clostridium botulinum A3 str. Loch Maree 6153854 YP_001785659.1 CDS CLK_3510 NC_010520.1 385057 385803 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 385057..385803 Clostridium botulinum A3 str. Loch Maree 6153873 YP_001785660.1 CDS CLK_3511 NC_010520.1 385803 387665 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 385803..387665 Clostridium botulinum A3 str. Loch Maree 6154917 YP_001785661.1 CDS CLK_3512 NC_010520.1 388083 388439 D identified by match to protein family HMM PF03788; LrgA family protein 388083..388439 Clostridium botulinum A3 str. Loch Maree 6152049 YP_001785662.1 CDS CLK_3513 NC_010520.1 388442 389137 D identified by match to protein family HMM PF04172; lrgB-like family protein 388442..389137 Clostridium botulinum A3 str. Loch Maree 6153310 YP_001785663.1 CDS CLK_3514 NC_010520.1 389433 390083 D lipoprotein 389433..390083 Clostridium botulinum A3 str. Loch Maree 6151691 YP_001785664.1 CDS CLK_3515 NC_010520.1 390452 391351 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 390452..391351 Clostridium botulinum A3 str. Loch Maree 6152119 YP_001785665.1 CDS CLK_3516 NC_010520.1 391486 392994 D identified by match to protein family HMM PF08903; hypothetical protein 391486..392994 Clostridium botulinum A3 str. Loch Maree 6153161 YP_001785666.1 CDS CLK_3517 NC_010520.1 393317 393868 D hypothetical protein 393317..393868 Clostridium botulinum A3 str. Loch Maree 6153692 YP_001785667.1 CDS CLK_3518 NC_010520.1 394046 394513 D hypothetical protein 394046..394513 Clostridium botulinum A3 str. Loch Maree 6151824 YP_001785668.1 CDS CLK_3519 NC_010520.1 394506 395195 D identified by match to protein family HMM PF04647; accessory gene regulator protein B 394506..395195 Clostridium botulinum A3 str. Loch Maree 6154275 YP_001785669.1 CDS CLK_3520 NC_010520.1 395179 395313 D lipoprotein 395179..395313 Clostridium botulinum A3 str. Loch Maree 6153230 YP_001785670.1 CDS CLK_3521 NC_010520.1 395385 397088 D identified by match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM TIGR00254; diguanylate cyclase 395385..397088 Clostridium botulinum A3 str. Loch Maree 6153136 YP_001785671.1 CDS CLK_3522 NC_010520.1 397319 397828 D identified by match to protein family HMM PF00583; acetyltransferase 397319..397828 Clostridium botulinum A3 str. Loch Maree 6154776 YP_001785672.1 CDS CLK_3523 NC_010520.1 398226 398678 D hypothetical protein 398226..398678 Clostridium botulinum A3 str. Loch Maree 6153883 YP_001785673.1 CDS CLK_3524 NC_010520.1 398705 400552 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 398705..400552 Clostridium botulinum A3 str. Loch Maree 6153588 YP_001785674.1 CDS CLK_3525 NC_010520.1 400808 401245 D hypothetical protein 400808..401245 Clostridium botulinum A3 str. Loch Maree 6151888 YP_001785675.1 CDS CLK_3526 NC_010520.1 401232 401861 D identified by match to protein family HMM PF04647; accessory gene regulator protein B 401232..401861 Clostridium botulinum A3 str. Loch Maree 6154379 YP_001785676.1 CDS CLK_3527 NC_010520.1 401956 402090 D identified by Glimmer3; hypothetical protein 401956..402090 Clostridium botulinum A3 str. Loch Maree 6153529 YP_001785677.1 CDS CLK_3528 NC_010520.1 402173 404026 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 402173..404026 Clostridium botulinum A3 str. Loch Maree 6153124 YP_001785678.1 CDS CLK_3529 NC_010520.1 404259 405125 D identified by match to protein family HMM PF01171; PP-loop family protein 404259..405125 Clostridium botulinum A3 str. Loch Maree 6154726 YP_001785679.1 CDS CLK_3530 NC_010520.1 405249 405794 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(405249..405794) Clostridium botulinum A3 str. Loch Maree 6154126 YP_001785680.1 CDS CLK_3531 NC_010520.1 406149 407555 D identified by match to protein family HMM PF00324; amino acid permease 406149..407555 Clostridium botulinum A3 str. Loch Maree 6151484 YP_001785681.1 CDS CLK_3532 NC_010520.1 407668 408750 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family metallopeptidase 407668..408750 Clostridium botulinum A3 str. Loch Maree 6152940 YP_001785682.1 CDS adhE NC_010520.1 409178 411766 D identified by match to protein family HMM PF00171; match to protein family HMM PF00465; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 409178..411766 Clostridium botulinum A3 str. Loch Maree 6153250 YP_001785683.1 CDS CLK_3534 NC_010520.1 412085 412372 D hypothetical protein 412085..412372 Clostridium botulinum A3 str. Loch Maree 6154444 YP_001785684.1 CDS CLK_3535 NC_010520.1 412435 413025 D hypothetical protein 412435..413025 Clostridium botulinum A3 str. Loch Maree 6151509 YP_001785685.1 CDS CLK_3536 NC_010520.1 413311 413790 R hypothetical protein complement(413311..413790) Clostridium botulinum A3 str. Loch Maree 6151894 YP_001785686.1 CDS CLK_3537 NC_010520.1 414133 415143 R hypothetical protein complement(414133..415143) Clostridium botulinum A3 str. Loch Maree 6152709 YP_001785687.1 CDS CLK_3538 NC_010520.1 415247 415774 D identified by match to protein family HMM PF01569; PAP2 family protein 415247..415774 Clostridium botulinum A3 str. Loch Maree 6153260 YP_001785688.1 CDS CLK_3539 NC_010520.1 416170 416982 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 416170..416982 Clostridium botulinum A3 str. Loch Maree 6151908 YP_001785689.1 CDS CLK_3540 NC_010520.1 417090 417776 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 417090..417776 Clostridium botulinum A3 str. Loch Maree 6152759 YP_001785690.1 CDS CLK_3541 NC_010520.1 417786 419180 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 417786..419180 Clostridium botulinum A3 str. Loch Maree 6154044 YP_001785691.1 CDS CLK_3542 NC_010520.1 419243 420733 D lipoprotein 419243..420733 Clostridium botulinum A3 str. Loch Maree 6154894 YP_001785692.1 CDS CLK_3543 NC_010520.1 420777 421343 D identified by match to protein family HMM PF06962; hypothetical protein 420777..421343 Clostridium botulinum A3 str. Loch Maree 6154290 YP_001785693.1 CDS CLK_3544 NC_010520.1 421369 422043 D identified by match to protein family HMM PF09335; DedA family protein 421369..422043 Clostridium botulinum A3 str. Loch Maree 6151706 YP_001785694.1 CDS CLK_3545 NC_010520.1 422184 424772 R identified by match to protein family HMM PF00563; match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM PF05228; match to protein family HMM TIGR00254; diguanylate cyclase complement(422184..424772) Clostridium botulinum A3 str. Loch Maree 6152469 YP_001785695.1 CDS CLK_3546 NC_010520.1 425060 426247 R hypothetical protein complement(425060..426247) Clostridium botulinum A3 str. Loch Maree 6153750 YP_001785696.1 CDS CLK_3547 NC_010520.1 426631 427971 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 426631..427971 Clostridium botulinum A3 str. Loch Maree 6154665 YP_001785697.1 CDS CLK_3548 NC_010520.1 428165 428731 D identified by match to protein family HMM PF01966; HD domain-containing protein 428165..428731 Clostridium botulinum A3 str. Loch Maree 6152181 YP_001785698.1 CDS CLK_3549 NC_010520.1 429043 430311 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 429043..430311 Clostridium botulinum A3 str. Loch Maree 6152261 YP_001785699.1 CDS CLK_3550 NC_010520.1 430446 431768 R identified by match to protein family HMM PF00266; class V aminotransferase complement(430446..431768) Clostridium botulinum A3 str. Loch Maree 6151726 YP_001785700.1 CDS CLK_3551 NC_010520.1 432076 433086 D identified by match to protein family HMM PF03601; hypothetical protein 432076..433086 Clostridium botulinum A3 str. Loch Maree 6153116 YP_001785701.1 CDS CLK_3552 NC_010520.1 433218 433892 D hypothetical protein 433218..433892 Clostridium botulinum A3 str. Loch Maree 6151921 YP_001785702.1 CDS CLK_3553 NC_010520.1 433838 434536 D identified by match to protein family HMM PF00486; DNA-binding response regulator 433838..434536 Clostridium botulinum A3 str. Loch Maree 6152758 YP_001785703.1 CDS CLK_3554 NC_010520.1 434526 436040 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 434526..436040 Clostridium botulinum A3 str. Loch Maree 6151927 YP_001785704.1 CDS CLK_3555 NC_010520.1 436148 437563 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 436148..437563 Clostridium botulinum A3 str. Loch Maree 6154340 YP_001785705.1 CDS CLK_3556 NC_010520.1 438793 440112 D identified by match to protein family HMM PF00037; match to protein family HMM PF01512; match to protein family HMM TIGR01945; RnfABCDGE type electron transport complex subunit C 438793..440112 Clostridium botulinum A3 str. Loch Maree 6153590 YP_001785706.1 CDS CLK_3557 NC_010520.1 440135 441067 D identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; RnfABCDGE type electron transport complex subunit D 440135..441067 Clostridium botulinum A3 str. Loch Maree 6152282 YP_001785707.1 CDS CLK_3558 NC_010520.1 441067 441738 D identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; RnfABCDGE type electron transport complex subunit G 441067..441738 Clostridium botulinum A3 str. Loch Maree 6151491 YP_001785708.1 CDS CLK_3559 NC_010520.1 441749 442351 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 441749..442351 Clostridium botulinum A3 str. Loch Maree 6154221 YP_001785709.1 CDS CLK_3560 NC_010520.1 442405 442983 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; RnfABCDGE type electron transport complex subunit A 442405..442983 Clostridium botulinum A3 str. Loch Maree 6153164 YP_001785710.1 CDS CLK_3561 NC_010520.1 442997 443830 D involved in the electron transport chain; in Methanosarcina acetivorans this protein is part of a cluster involved in electron transfer during growth on acetate; ferredoxin 442997..443830 Clostridium botulinum A3 str. Loch Maree 6152106 YP_001785711.1 CDS CLK_3562 NC_010520.1 444184 445272 D identified by match to protein family HMM PF04122; amidase 444184..445272 Clostridium botulinum A3 str. Loch Maree 6154766 YP_001785712.1 CDS CLK_3563 NC_010520.1 445383 445907 R identified by match to protein family HMM PF07456; heptaprenyl diphosphate synthase component I complement(445383..445907) Clostridium botulinum A3 str. Loch Maree 6153703 YP_001785713.1 CDS CLK_3564 NC_010520.1 445925 446317 R identified by match to protein family HMM PF07009; hypothetical protein complement(445925..446317) Clostridium botulinum A3 str. Loch Maree 6152666 YP_001785714.1 CDS CLK_3565 NC_010520.1 446430 447464 R identified by match to protein family HMM PF02424; apbE family protein complement(446430..447464) Clostridium botulinum A3 str. Loch Maree 6151651 YP_001785715.1 CDS CLK_3566 NC_010520.1 448074 452273 D identified by match to protein family HMM PF04122; cell surface protein 448074..452273 Clostridium botulinum A3 str. Loch Maree 6154277 YP_001785716.1 CDS CLK_3567 NC_010520.1 452673 454742 D identified by match to protein family HMM PF04122; match to protein family HMM PF04151; amidase 452673..454742 Clostridium botulinum A3 str. Loch Maree 6151581 YP_001785717.1 CDS CLK_3568 NC_010520.1 454829 455065 D identified by Glimmer3; hypothetical protein 454829..455065 Clostridium botulinum A3 str. Loch Maree 6154300 YP_001785718.1 CDS CLK_3569 NC_010520.1 455377 460281 D identified by match to protein family HMM PF04122; cell surface protein 455377..460281 Clostridium botulinum A3 str. Loch Maree 6151752 YP_001785719.1 CDS CLK_3570 NC_010520.1 460352 460786 R identified by Glimmer3; hypothetical protein complement(460352..460786) Clostridium botulinum A3 str. Loch Maree 6152389 YP_001785720.1 CDS CLK_3571 NC_010520.1 461328 464762 D identified by match to protein family HMM PF04122; cell wall-binding protease 461328..464762 Clostridium botulinum A3 str. Loch Maree 6153869 YP_001785721.1 CDS CLK_3572 NC_010520.1 464848 465837 R acyltransferase complement(464848..465837) Clostridium botulinum A3 str. Loch Maree 6154434 YP_001785722.1 CDS CLK_3573 NC_010520.1 466298 467809 D hypothetical protein 466298..467809 Clostridium botulinum A3 str. Loch Maree 6153031 YP_001785723.1 CDS CLK_3574 NC_010520.1 468205 469116 D phosphate ABC transporter substrate-binding protein 468205..469116 Clostridium botulinum A3 str. Loch Maree 6154057 YP_001785724.1 CDS CLK_3575 NC_010520.1 469320 470183 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 469320..470183 Clostridium botulinum A3 str. Loch Maree 6151410 YP_001785725.1 CDS CLK_3576 NC_010520.1 470219 471049 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 470219..471049 Clostridium botulinum A3 str. Loch Maree 6152461 YP_001785726.1 CDS CLK_3577 NC_010520.1 471051 471797 D identified by match to protein family HMM PF00005; phosphate ABC transporter ATP-binding protein 471051..471797 Clostridium botulinum A3 str. Loch Maree 6152699 YP_001785727.1 CDS CLK_3578 NC_010520.1 471918 472388 D hypothetical protein 471918..472388 Clostridium botulinum A3 str. Loch Maree 6153188 YP_001785728.1 CDS CLK_3579 NC_010520.1 472874 474325 D identified by match to protein family HMM PF00324; amino acid permease 472874..474325 Clostridium botulinum A3 str. Loch Maree 6154605 YP_001785729.1 CDS CLK_3580 NC_010520.1 474391 474945 R identified by match to protein family HMM TIGR02898; lipoprotein complement(474391..474945) Clostridium botulinum A3 str. Loch Maree 6153767 YP_001785730.1 CDS CLK_3581 NC_010520.1 475134 475958 D hypothetical protein 475134..475958 Clostridium botulinum A3 str. Loch Maree 6153014 YP_001785731.1 CDS CLK_3582 NC_010520.1 476036 476731 D identified by match to protein family HMM PF01863; hypothetical protein 476036..476731 Clostridium botulinum A3 str. Loch Maree 6152228 YP_001785732.1 CDS CLK_3583 NC_010520.1 476818 477156 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; ssDNA-binding protein 476818..477156 Clostridium botulinum A3 str. Loch Maree 6151385 YP_001785733.1 CDS CLK_3584 NC_010520.1 477409 477960 D hypothetical protein 477409..477960 Clostridium botulinum A3 str. Loch Maree 6154136 YP_001785734.1 CDS CLK_3586 NC_010520.1 478024 478458 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 478024..478458 Clostridium botulinum A3 str. Loch Maree 6153773 YP_001785735.1 CDS CLK_3585 NC_010520.1 478455 478802 R hypothetical protein complement(478455..478802) Clostridium botulinum A3 str. Loch Maree 6154257 YP_001785736.1 CDS CLK_3587 NC_010520.1 479072 480130 D identified by match to protein family HMM PF01966; HD domain-containing protein 479072..480130 Clostridium botulinum A3 str. Loch Maree 6152573 YP_001785737.1 CDS CLK_3588 NC_010520.1 480267 481292 D identified by match to protein family HMM PF01694; membrane associated peptidase 480267..481292 Clostridium botulinum A3 str. Loch Maree 6152974 YP_001785738.1 CDS CLK_3589 NC_010520.1 481590 483644 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(481590..483644) Clostridium botulinum A3 str. Loch Maree 6154774 YP_001785739.1 CDS CLK_3590 NC_010520.1 483801 483944 D identified by Glimmer3; hypothetical protein 483801..483944 Clostridium botulinum A3 str. Loch Maree 6154401 YP_001785740.1 CDS CLK_3591 NC_010520.1 484323 486053 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease complement(484323..486053) Clostridium botulinum A3 str. Loch Maree 6151334 YP_001785741.1 CDS CLK_3592 NC_010520.1 486273 487328 D identified by match to protein family HMM PF06803; hypothetical protein 486273..487328 Clostridium botulinum A3 str. Loch Maree 6153182 YP_001785742.1 CDS rnhA NC_010520.1 487303 487752 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 487303..487752 Clostridium botulinum A3 str. Loch Maree 6154246 YP_001785743.1 CDS CLK_3594 NC_010520.1 487815 487991 D identified by Glimmer3; hypothetical protein 487815..487991 Clostridium botulinum A3 str. Loch Maree 6152084 YP_001785744.1 CDS CLK_3595 NC_010520.1 488172 489476 D identified by match to protein family HMM PF00515; match to protein family HMM PF01381; TPR repeat-containing DNA binding protein 488172..489476 Clostridium botulinum A3 str. Loch Maree 6153069 YP_001785745.1 CDS CLK_3596 NC_010520.1 489508 490761 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 489508..490761 Clostridium botulinum A3 str. Loch Maree 6154389 YP_001785746.1 CDS CLK_3597 NC_010520.1 491112 491264 D identified by Glimmer3; hypothetical protein 491112..491264 Clostridium botulinum A3 str. Loch Maree 6153607 YP_001785747.1 CDS CLK_3598 NC_010520.1 491279 491884 D identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 491279..491884 Clostridium botulinum A3 str. Loch Maree 6152767 YP_001785748.1 CDS CLK_3599 NC_010520.1 492155 493018 D hypothetical protein 492155..493018 Clostridium botulinum A3 str. Loch Maree 6152715 YP_001785749.1 CDS clpB NC_010520.1 493474 496074 D identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; clpB protein 493474..496074 Clostridium botulinum A3 str. Loch Maree 6154084 YP_001785750.1 CDS CLK_3601 NC_010520.1 496960 497688 R identified by match to protein family HMM PF07685; CobB/CobQ family glutamine amidotransferase complement(496960..497688) Clostridium botulinum A3 str. Loch Maree 6154815 YP_001785751.1 CDS CLK_3602 NC_010520.1 497746 499107 R identified by match to protein family HMM PF08245; match to protein family HMM PF08353; UDP-N-acetylmuramyl tripeptide synthetase-like protein complement(497746..499107) Clostridium botulinum A3 str. Loch Maree 6154836 YP_001785752.1 CDS manA NC_010520.1 499372 500352 D identified by match to protein family HMM PF01238; mannose-6-phosphate isomerase 499372..500352 Clostridium botulinum A3 str. Loch Maree 6152364 YP_001785753.1 CDS CLK_3604 NC_010520.1 500700 501815 D lipoprotein 500700..501815 Clostridium botulinum A3 str. Loch Maree 6153777 YP_001785754.1 CDS CLK_3605 NC_010520.1 501923 502777 D phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 501923..502777 Clostridium botulinum A3 str. Loch Maree 6154351 YP_001785755.1 CDS CLK_3617 NC_010520.1 508756 509619 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(508756..509619) Clostridium botulinum A3 str. Loch Maree 6155068 YP_001785756.1 CDS CLK_3618 NC_010520.1 509756 510478 D identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 509756..510478 Clostridium botulinum A3 str. Loch Maree 6154175 YP_001785757.1 CDS CLK_3619 NC_010520.1 511224 512585 D identified by match to protein family HMM PF00682; HMGL-related enzyme 511224..512585 Clostridium botulinum A3 str. Loch Maree 6154993 YP_001785758.1 CDS CLK_3620 NC_010520.1 512728 514650 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 512728..514650 Clostridium botulinum A3 str. Loch Maree 6153990 YP_001785759.1 CDS CLK_3621 NC_010520.1 514888 515886 D identified by match to protein family HMM PF00180; isocitrate/isopropylmalate family dehydrogenase 514888..515886 Clostridium botulinum A3 str. Loch Maree 6153412 YP_001785760.1 CDS CLK_3622 NC_010520.1 516236 517021 D identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein 516236..517021 Clostridium botulinum A3 str. Loch Maree 6152924 YP_001785761.1 CDS CLK_3623 NC_010520.1 517540 519306 D identified by match to protein family HMM PF03553; match to protein family HMM PF03606; Na+/H+ antiporter family protein 517540..519306 Clostridium botulinum A3 str. Loch Maree 6151825 YP_001785762.1 CDS CLK_3624 NC_010520.1 519333 519548 R identified by match to protein family HMM PF04070; hypothetical protein complement(519333..519548) Clostridium botulinum A3 str. Loch Maree 6154495 YP_001785763.1 CDS panD NC_010520.1 519636 520019 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(519636..520019) Clostridium botulinum A3 str. Loch Maree 6153024 YP_001785764.1 CDS panC NC_010520.1 520227 521072 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(520227..521072) Clostridium botulinum A3 str. Loch Maree 6151603 YP_001785765.1 CDS panB NC_010520.1 521275 522102 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(521275..522102) Clostridium botulinum A3 str. Loch Maree 6154172 YP_001785766.1 CDS addB NC_010520.1 523045 526488 D identified by match to protein family HMM TIGR02773; ATP-dependent nuclease subunit B 523045..526488 Clostridium botulinum A3 str. Loch Maree 6154309 YP_001785767.1 CDS CLK_3629 NC_010520.1 526627 527019 R identified by Glimmer3; hypothetical protein complement(526627..527019) Clostridium botulinum A3 str. Loch Maree 6153246 YP_001785768.1 CDS CLK_3630 NC_010520.1 527327 527977 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 527327..527977 Clostridium botulinum A3 str. Loch Maree 6151787 YP_001785769.1 CDS CLK_3631 NC_010520.1 527980 528666 D hypothetical protein 527980..528666 Clostridium botulinum A3 str. Loch Maree 6151653 YP_001785770.1 CDS CLK_3632 NC_010520.1 528979 529110 D identified by Glimmer3; hypothetical protein 528979..529110 Clostridium botulinum A3 str. Loch Maree 6154354 YP_001785771.1 CDS CLK_3633 NC_010520.1 529420 530097 R identified by match to protein family HMM PF04892; vanZF protein complement(529420..530097) Clostridium botulinum A3 str. Loch Maree 6153585 YP_001785772.1 CDS CLK_3634 NC_010520.1 530722 531330 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(530722..531330) Clostridium botulinum A3 str. Loch Maree 6152256 YP_001785773.1 CDS hypB NC_010520.1 531575 532246 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 531575..532246 Clostridium botulinum A3 str. Loch Maree 6151963 YP_001785774.1 CDS CLK_3636 NC_010520.1 532605 532784 D pyridine nucleotide-disulfide oxidoreductase 532605..532784 Clostridium botulinum A3 str. Loch Maree 6152769 YP_001785775.1 CDS CLK_3637 NC_010520.1 532855 533841 D hypothetical protein 532855..533841 Clostridium botulinum A3 str. Loch Maree 6153622 YP_001785776.1 CDS addA NC_010520.1 534278 538117 D identified by match to protein family HMM PF00580; match to protein family HMM TIGR02785; recombination helicase AddA 534278..538117 Clostridium botulinum A3 str. Loch Maree 6154039 YP_001785777.1 CDS CLK_3639 NC_010520.1 538257 539948 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 538257..539948 Clostridium botulinum A3 str. Loch Maree 6152979 YP_001785778.1 CDS pepT NC_010520.1 540025 541251 D catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 540025..541251 Clostridium botulinum A3 str. Loch Maree 6154318 YP_001785779.1 CDS CLK_3641 NC_010520.1 541489 542421 R identified by match to protein family HMM PF01734; phospholipase complement(541489..542421) Clostridium botulinum A3 str. Loch Maree 6153217 YP_001785780.1 CDS CLK_3642 NC_010520.1 542990 543706 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 542990..543706 Clostridium botulinum A3 str. Loch Maree 6152551 YP_001785781.1 CDS CLK_3643 NC_010520.1 543827 544285 D identified by match to protein family HMM PF00903; glyoxalase 543827..544285 Clostridium botulinum A3 str. Loch Maree 6151778 YP_001785782.1 CDS CLK_3644 NC_010520.1 544407 544640 D identified by Glimmer3; hypothetical protein 544407..544640 Clostridium botulinum A3 str. Loch Maree 6152158 YP_001785783.1 CDS CLK_3645 NC_010520.1 544828 545517 D hypothetical protein 544828..545517 Clostridium botulinum A3 str. Loch Maree 6153738 YP_001785784.1 CDS CLK_3646 NC_010520.1 545536 545733 D identified by match to protein family HMM PF01381; hypothetical protein 545536..545733 Clostridium botulinum A3 str. Loch Maree 6153870 YP_001785785.1 CDS CLK_3647 NC_010520.1 545871 547286 D identified by match to protein family HMM PF04122; N-acetylmuramoyl-L-alanine amidase 545871..547286 Clostridium botulinum A3 str. Loch Maree 6152787 YP_001785786.1 CDS CLK_3648 NC_010520.1 547620 548255 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(547620..548255) Clostridium botulinum A3 str. Loch Maree 6154616 YP_001785787.1 CDS CLK_3649 NC_010520.1 548268 549071 R identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein complement(548268..549071) Clostridium botulinum A3 str. Loch Maree 6153852 YP_001785788.1 CDS CLK_3650 NC_010520.1 549292 550020 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 549292..550020 Clostridium botulinum A3 str. Loch Maree 6152957 YP_001785789.1 CDS CLK_3651 NC_010520.1 550368 551579 R identified by match to protein family HMM PF00563; match to protein family HMM PF08668; diguanylate phosphodiesterase complement(550368..551579) Clostridium botulinum A3 str. Loch Maree 6152195 YP_001785790.1 CDS thiE NC_010520.1 551844 552461 R Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase complement(551844..552461) Clostridium botulinum A3 str. Loch Maree 6154572 YP_001785791.1 CDS thiM NC_010520.1 552452 553243 R identified by match to protein family HMM PF02110; match to protein family HMM TIGR00694; hydroxyethylthiazole kinase complement(552452..553243) Clostridium botulinum A3 str. Loch Maree 6153770 YP_001785792.1 CDS thiD NC_010520.1 553474 554274 R identified by match to protein family HMM PF01256; match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(553474..554274) Clostridium botulinum A3 str. Loch Maree 6152954 YP_001785793.1 CDS CLK_3655 NC_010520.1 554926 555060 D identified by Glimmer3; hypothetical protein 554926..555060 Clostridium botulinum A3 str. Loch Maree 6154485 YP_001785794.1 CDS ddl NC_010520.1 555172 556074 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 555172..556074 Clostridium botulinum A3 str. Loch Maree 6153609 YP_001785795.1 CDS CLK_3657 NC_010520.1 556230 557372 D identified by match to protein family HMM PF01094; high-affinity branched-chain amino acid ABC transporter amino acid-binding protein 556230..557372 Clostridium botulinum A3 str. Loch Maree 6154527 YP_001785796.1 CDS CLK_3658 NC_010520.1 557376 558248 D identified by match to protein family HMM PF02653; high-affinity branched-chain amino acid ABC transporter permease 557376..558248 Clostridium botulinum A3 str. Loch Maree 6153413 YP_001785797.1 CDS CLK_3659 NC_010520.1 558249 559193 D identified by match to protein family HMM PF02653; high-affinity branched-chain amino acid ABC transporter permease 558249..559193 Clostridium botulinum A3 str. Loch Maree 6152396 YP_001785798.1 CDS CLK_3660 NC_010520.1 559205 559942 D identified by match to protein family HMM PF00005; high-affinity branched chain amino acid ABC transporter ATP-binding protein 559205..559942 Clostridium botulinum A3 str. Loch Maree 6151341 YP_001785799.1 CDS CLK_3661 NC_010520.1 559944 560645 D identified by match to protein family HMM PF00005; high-affinity branched chain amino acid ABC transporter ATP-binding protein 559944..560645 Clostridium botulinum A3 str. Loch Maree 6152191 YP_001785800.1 CDS CLK_3662 NC_010520.1 560674 561450 D identified by match to protein family HMM PF02596; hypothetical protein 560674..561450 Clostridium botulinum A3 str. Loch Maree 6154690 YP_001785801.1 CDS CLK_3663 NC_010520.1 561868 562626 D identified by match to protein family HMM PF06738; hypothetical protein 561868..562626 Clostridium botulinum A3 str. Loch Maree 6153646 YP_001785802.1 CDS CLK_3664 NC_010520.1 562620 563063 D hypothetical protein 562620..563063 Clostridium botulinum A3 str. Loch Maree 6152707 YP_001785803.1 CDS CLK_3665 NC_010520.1 563206 564657 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 563206..564657 Clostridium botulinum A3 str. Loch Maree 6153488 YP_001785804.1 CDS CLK_3666 NC_010520.1 564718 565287 D identified by match to protein family HMM PF04011; hypothetical protein 564718..565287 Clostridium botulinum A3 str. Loch Maree 6152656 YP_001785805.1 CDS CLK_3667 NC_010520.1 565348 566133 D identified by match to protein family HMM PF04536; lipoprotein 565348..566133 Clostridium botulinum A3 str. Loch Maree 6154584 YP_001785806.1 CDS CLK_3668 NC_010520.1 566652 567512 D identified by match to protein family HMM PF04536; hypothetical protein 566652..567512 Clostridium botulinum A3 str. Loch Maree 6153756 YP_001785807.1 CDS CLK_3669 NC_010520.1 567788 568681 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 567788..568681 Clostridium botulinum A3 str. Loch Maree 6154664 YP_001785808.1 CDS CLK_3670 NC_010520.1 568815 569297 D identified by Glimmer3; hypothetical protein 568815..569297 Clostridium botulinum A3 str. Loch Maree 6153822 YP_001785809.1 CDS CLK_3671 NC_010520.1 569473 569997 D hypothetical protein 569473..569997 Clostridium botulinum A3 str. Loch Maree 6152987 YP_001785810.1 CDS CLK_3672 NC_010520.1 569999 570589 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methlytransferase-like protein 569999..570589 Clostridium botulinum A3 str. Loch Maree 6151367 YP_001785811.1 CDS CLK_3673 NC_010520.1 570675 570914 R hypothetical protein complement(570675..570914) Clostridium botulinum A3 str. Loch Maree 6154158 YP_001785812.1 CDS CLK_3674 NC_010520.1 570935 571396 R hypothetical protein complement(570935..571396) Clostridium botulinum A3 str. Loch Maree 6153473 YP_001785813.1 CDS CLK_3675 NC_010520.1 571839 573068 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; nuclease SbcCD subunit D 571839..573068 Clostridium botulinum A3 str. Loch Maree 6152430 YP_001785814.1 CDS sbcC NC_010520.1 573043 576573 D identified by match to protein family HMM PF02463; exonuclease SbcC 573043..576573 Clostridium botulinum A3 str. Loch Maree 6153528 YP_001785815.1 CDS CLK_3677 NC_010520.1 576608 577156 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 576608..577156 Clostridium botulinum A3 str. Loch Maree 6154161 YP_001785816.1 CDS CLK_3678 NC_010520.1 577140 577325 D identified by Glimmer3; hypothetical protein 577140..577325 Clostridium botulinum A3 str. Loch Maree 6152136 YP_001785817.1 CDS CLK_3679 NC_010520.1 578444 578605 D identified by Glimmer3; hypothetical protein 578444..578605 Clostridium botulinum A3 str. Loch Maree 6152538 YP_001785818.1 CDS CLK_3680 NC_010520.1 578754 578918 D ABC transporter CbaT 578754..578918 Clostridium botulinum A3 str. Loch Maree 6153969 YP_001785819.1 CDS CLK_3681 NC_010520.1 579220 579516 D hypothetical protein 579220..579516 Clostridium botulinum A3 str. Loch Maree 6152835 YP_001785820.1 CDS CLK_3682 NC_010520.1 579722 581944 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193; ABC transporter CbaT 579722..581944 Clostridium botulinum A3 str. Loch Maree 6153968 YP_001785821.1 CDS CLK_3683 NC_010520.1 581944 583374 D bacteriocin ABC transporter bacteriocin-binding protein 581944..583374 Clostridium botulinum A3 str. Loch Maree 6153533 YP_001785822.1 CDS CLK_3684 NC_010520.1 584161 585012 D identified by match to protein family HMM PF02588; hypothetical protein 584161..585012 Clostridium botulinum A3 str. Loch Maree 6151880 YP_001785823.1 CDS CLK_3685 NC_010520.1 585478 585843 D identified by match to protein family HMM PF01022; cadmium resistance transcriptional regulator CadC 585478..585843 Clostridium botulinum A3 str. Loch Maree 6153289 YP_001785824.1 CDS cadA NC_010520.1 585919 588147 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 585919..588147 Clostridium botulinum A3 str. Loch Maree 6154056 YP_001785825.1 CDS CLK_3688 NC_010520.1 588659 588826 D bacteriophage endolysin 588659..588826 Clostridium botulinum A3 str. Loch Maree 6155058 YP_001785826.1 CDS CLK_3689 NC_010520.1 589342 590163 D identified by match to protein family HMM PF00877; match to protein family HMM PF01471; SagA protein 589342..590163 Clostridium botulinum A3 str. Loch Maree 6152492 YP_001785827.1 CDS CLK_3690 NC_010520.1 590497 590700 R identified by Glimmer3; hypothetical protein complement(590497..590700) Clostridium botulinum A3 str. Loch Maree 6153547 YP_001785828.1 CDS CLK_3691 NC_010520.1 590990 591625 R identified by match to protein family HMM PF00005; macrolide export ATP-binding protein/permease MacB complement(590990..591625) Clostridium botulinum A3 str. Loch Maree 6152770 YP_001785829.1 CDS CLK_3692 NC_010520.1 591628 593751 R membrane-spanning protein complement(591628..593751) Clostridium botulinum A3 str. Loch Maree 6151433 YP_001785830.1 CDS CLK_3693 NC_010520.1 593801 594193 R identified by Glimmer3; hypothetical protein complement(593801..594193) Clostridium botulinum A3 str. Loch Maree 6151988 YP_001785831.1 CDS CLK_3694 NC_010520.1 594874 596250 D identified by match to protein family HMM PF02562; PhoH family protein 594874..596250 Clostridium botulinum A3 str. Loch Maree 6151924 YP_001785832.1 CDS CLK_3695 NC_010520.1 596636 597640 D hypothetical protein 596636..597640 Clostridium botulinum A3 str. Loch Maree 6154794 YP_001785833.1 CDS CLK_3696 NC_010520.1 597650 598666 D hypothetical protein 597650..598666 Clostridium botulinum A3 str. Loch Maree 6154017 YP_001785834.1 CDS CLK_3697 NC_010520.1 598987 599160 D identified by Glimmer3; hypothetical protein 598987..599160 Clostridium botulinum A3 str. Loch Maree 6153186 YP_001785835.1 CDS sagB NC_010520.1 599325 600281 D streptolysin associated protein SagB 599325..600281 Clostridium botulinum A3 str. Loch Maree 6151355 YP_001785836.1 CDS sagC NC_010520.1 600285 601367 D streptolysin associated protein SagC 600285..601367 Clostridium botulinum A3 str. Loch Maree 6152377 YP_001785837.1 CDS sagD NC_010520.1 601383 602741 D identified by match to protein family HMM PF02624; streptolysin associated protein SagD 601383..602741 Clostridium botulinum A3 str. Loch Maree 6153484 YP_001785838.1 CDS CLK_3701 NC_010520.1 602716 603354 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 602716..603354 Clostridium botulinum A3 str. Loch Maree 6154505 YP_001785839.1 CDS CLK_3702 NC_010520.1 603362 604090 D hypothetical protein 603362..604090 Clostridium botulinum A3 str. Loch Maree 6153514 YP_001785840.1 CDS sagG NC_010520.1 604383 605315 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein SagG 604383..605315 Clostridium botulinum A3 str. Loch Maree 6152721 YP_001785841.1 CDS sagH NC_010520.1 605327 606451 D identified by match to protein family HMM PF01061; ABC transporter ATP-binding protein/permease SagH 605327..606451 Clostridium botulinum A3 str. Loch Maree 6151898 YP_001785842.1 CDS sagI NC_010520.1 606453 607595 D identified by match to protein family HMM PF01061; drug ABC transporter ATP-binding protein/permease 606453..607595 Clostridium botulinum A3 str. Loch Maree 6154810 YP_001785843.1 CDS CLK_3706 NC_010520.1 607970 608620 D identified by match to protein family HMM PF02163; metalloprotease 607970..608620 Clostridium botulinum A3 str. Loch Maree 6153292 YP_001785844.1 CDS CLK_3707 NC_010520.1 608712 609182 R identified by Glimmer3; hypothetical protein complement(608712..609182) Clostridium botulinum A3 str. Loch Maree 6152245 YP_001785845.1 CDS CLK_3708 NC_010520.1 609300 610562 R identified by match to protein family HMM PF00939; match to protein family HMM PF02040; match to protein family HMM PF03600; arsenical pump family protein complement(609300..610562) Clostridium botulinum A3 str. Loch Maree 6152044 YP_001785846.1 CDS CLK_3709 NC_010520.1 610689 612029 R hypothetical protein complement(610689..612029) Clostridium botulinum A3 str. Loch Maree 6154953 YP_001785847.1 CDS trmB NC_010520.1 612304 612957 D tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 612304..612957 Clostridium botulinum A3 str. Loch Maree 6153532 YP_001785848.1 CDS CLK_3711 NC_010520.1 613170 613433 D hypothetical protein 613170..613433 Clostridium botulinum A3 str. Loch Maree 6152756 YP_001785849.1 CDS tpx NC_010520.1 613528 614022 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(613528..614022) Clostridium botulinum A3 str. Loch Maree 6152483 YP_001785850.1 CDS fabG NC_010520.1 614404 615147 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 614404..615147 Clostridium botulinum A3 str. Loch Maree 6151714 YP_001785851.1 CDS CLK_3714 NC_010520.1 615210 616163 D identified by match to protein family HMM PF00072; response regulator 615210..616163 Clostridium botulinum A3 str. Loch Maree 6154195 YP_001785852.1 CDS CLK_3715 NC_010520.1 616303 618603 R identified by match to protein family HMM PF00877; match to protein family HMM PF05257; match to protein family HMM PF06347; match to protein family HMM PF08239; peptidoglycan hydrolase complement(616303..618603) Clostridium botulinum A3 str. Loch Maree 6153302 YP_001785853.1 CDS CLK_3716 NC_010520.1 618911 619855 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 618911..619855 Clostridium botulinum A3 str. Loch Maree 6151505 YP_001785854.1 CDS CLK_3717 NC_010520.1 620117 621364 D identified by match to protein family HMM PF00072; response regulator 620117..621364 Clostridium botulinum A3 str. Loch Maree 6154385 YP_001785855.1 CDS CLK_3718 NC_010520.1 621661 622245 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 621661..622245 Clostridium botulinum A3 str. Loch Maree 6154974 YP_001785856.1 CDS CLK_3719 NC_010520.1 622281 624305 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 622281..624305 Clostridium botulinum A3 str. Loch Maree 6152305 YP_001785857.1 CDS CLK_3720 NC_010520.1 624510 625304 D identified by match to protein family HMM PF00072; response regulator 624510..625304 Clostridium botulinum A3 str. Loch Maree 6153096 YP_001785858.1 CDS CLK_3721 NC_010520.1 625431 625556 R identified by Glimmer3; hypothetical protein complement(625431..625556) Clostridium botulinum A3 str. Loch Maree 6152004 YP_001785859.1 CDS serS NC_010520.1 626050 627327 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 626050..627327 Clostridium botulinum A3 str. Loch Maree 6152499 YP_001785860.1 CDS CLK_3723 NC_010520.1 627925 630279 D identified by match to protein family HMM PF06733; ATP-dependent helicase 627925..630279 Clostridium botulinum A3 str. Loch Maree 6151425 YP_001785861.1 CDS CLK_3724 NC_010520.1 630569 630760 R hypothetical protein complement(630569..630760) Clostridium botulinum A3 str. Loch Maree 6154563 YP_001785862.1 CDS CLK_3725 NC_010520.1 631259 631879 R identified by match to protein family HMM PF00392; match to protein family HMM PF02080; match to protein family HMM PF08279; GntR family transcriptional regulator complement(631259..631879) Clostridium botulinum A3 str. Loch Maree 6153505 YP_001785863.1 CDS ceo NC_010520.1 632134 633087 D identified by match to protein family HMM PF01262; N(5)-(carboxyethyl)ornithine synthase 632134..633087 Clostridium botulinum A3 str. Loch Maree 6151920 YP_001785864.1 CDS CLK_3727 NC_010520.1 633291 635297 R identified by match to protein family HMM PF06874; fructose-1,6-bisphosphatase complement(633291..635297) Clostridium botulinum A3 str. Loch Maree 6153009 YP_001785865.1 CDS CLK_3728 NC_010520.1 635581 635943 D identified by Glimmer3; hypothetical protein 635581..635943 Clostridium botulinum A3 str. Loch Maree 6152718 YP_001785866.1 CDS CLK_3729 NC_010520.1 636139 636552 D identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; hemerythrin-like metal-binding domain-containing protein 636139..636552 Clostridium botulinum A3 str. Loch Maree 6152591 YP_001785867.1 CDS CLK_3730 NC_010520.1 636927 637622 R identified by Glimmer3; hypothetical protein complement(636927..637622) Clostridium botulinum A3 str. Loch Maree 6153389 YP_001785868.1 CDS CLK_3731 NC_010520.1 638375 638797 D identified by Glimmer3; hypothetical protein 638375..638797 Clostridium botulinum A3 str. Loch Maree 6154205 YP_001785869.1 CDS CLK_3732 NC_010520.1 638910 639560 R identified by match to protein family HMM PF02777; Fe/Mn family superoxide dismutase complement(638910..639560) Clostridium botulinum A3 str. Loch Maree 6152319 YP_001785870.1 CDS CLK_3733 NC_010520.1 639753 640592 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 639753..640592 Clostridium botulinum A3 str. Loch Maree 6154097 YP_001785871.1 CDS CLK_3734 NC_010520.1 640690 640989 R hypothetical protein complement(640690..640989) Clostridium botulinum A3 str. Loch Maree 6154871 YP_001785872.1 CDS CLK_3735 NC_010520.1 641137 642990 R hypothetical protein complement(641137..642990) Clostridium botulinum A3 str. Loch Maree 6151886 YP_001785873.1 CDS CLK_3736 NC_010520.1 644184 644648 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(644184..644648) Clostridium botulinum A3 str. Loch Maree 6154629 YP_001785874.1 CDS CLK_3737 NC_010520.1 645173 645547 D hypothetical protein 645173..645547 Clostridium botulinum A3 str. Loch Maree 6151605 YP_001785875.1 CDS CLK_3738 NC_010520.1 646171 647544 D identified by match to protein family HMM PF00324; match to protein family HMM PF03845; amino acid permease 646171..647544 Clostridium botulinum A3 str. Loch Maree 6151853 YP_001785876.1 CDS CLK_3739 NC_010520.1 648161 649510 D identified by match to protein family HMM PF00324; match to protein family HMM PF03845; amino acid permease 648161..649510 Clostridium botulinum A3 str. Loch Maree 6152920 YP_001785877.1 CDS CLK_3740 NC_010520.1 649857 650366 D identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase 649857..650366 Clostridium botulinum A3 str. Loch Maree 6153982 YP_001785878.1 CDS CLK_3741 NC_010520.1 650411 651283 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 650411..651283 Clostridium botulinum A3 str. Loch Maree 6154915 YP_001785879.1 CDS CLK_3742 NC_010520.1 651421 654039 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517; ATPase P complement(651421..654039) Clostridium botulinum A3 str. Loch Maree 6153965 YP_001785880.1 CDS CLK_3743 NC_010520.1 654333 654869 R identified by match to protein family HMM PF02417; chromate transporter protein complement(654333..654869) Clostridium botulinum A3 str. Loch Maree 6153170 YP_001785881.1 CDS CLK_3744 NC_010520.1 654869 655405 R identified by match to protein family HMM PF02417; chromate transport protein complement(654869..655405) Clostridium botulinum A3 str. Loch Maree 6154254 YP_001785882.1 CDS CLK_3745 NC_010520.1 655579 656169 D identified by match to protein family HMM PF02452; PemK family protein 655579..656169 Clostridium botulinum A3 str. Loch Maree 6151611 YP_001785883.1 CDS CLK_3746 NC_010520.1 656601 657026 D identified by match to protein family HMM PF03885; hypothetical protein 656601..657026 Clostridium botulinum A3 str. Loch Maree 6153162 YP_001785884.1 CDS nadE NC_010520.1 657232 659148 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(657232..659148) Clostridium botulinum A3 str. Loch Maree 6152063 YP_001785885.1 CDS CLK_3748 NC_010520.1 659370 659810 D identified by match to protein family HMM PF01957; hypothetical protein 659370..659810 Clostridium botulinum A3 str. Loch Maree 6152746 YP_001785886.1 CDS CLK_3749 NC_010520.1 659813 660751 D identified by match to protein family HMM PF01145; hypothetical protein 659813..660751 Clostridium botulinum A3 str. Loch Maree 6151937 YP_001785887.1 CDS CLK_3750 NC_010520.1 660784 660924 D hypothetical protein 660784..660924 Clostridium botulinum A3 str. Loch Maree 6154400 YP_001785888.1 CDS CLK_3751 NC_010520.1 661113 661922 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 661113..661922 Clostridium botulinum A3 str. Loch Maree 6153553 YP_001785889.1 CDS pepP NC_010520.1 662142 663377 D identified by match to protein family HMM PF00557; match to protein family HMM PF05195; xaa-pro aminopeptidase 662142..663377 Clostridium botulinum A3 str. Loch Maree 6152317 YP_001785890.1 CDS CLK_3753 NC_010520.1 663863 664312 R hypothetical protein complement(663863..664312) Clostridium botulinum A3 str. Loch Maree 6154866 YP_001785891.1 CDS CLK_3754 NC_010520.1 664381 664902 R identified by match to protein family HMM PF00583; acetyltransferase complement(664381..664902) Clostridium botulinum A3 str. Loch Maree 6153651 YP_001785892.1 CDS CLK_3755 NC_010520.1 664969 665418 R identified by match to protein family HMM PF00583; AraC family transcriptional regulator complement(664969..665418) Clostridium botulinum A3 str. Loch Maree 6152793 YP_001785893.1 CDS CLK_3756 NC_010520.1 665813 666025 D identified by match to protein family HMM PF04324; (2Fe-2S)-binding protein 665813..666025 Clostridium botulinum A3 str. Loch Maree 6151956 YP_001785894.1 CDS CLK_3757 NC_010520.1 666647 666796 D hypothetical protein 666647..666796 Clostridium botulinum A3 str. Loch Maree 6153517 YP_001785895.1 CDS CLK_3758 NC_010520.1 667151 668059 D hypothetical protein 667151..668059 Clostridium botulinum A3 str. Loch Maree 6154076 YP_001785896.1 CDS CLK_3759 NC_010520.1 668487 668996 D identified by Glimmer3; hypothetical protein 668487..668996 Clostridium botulinum A3 str. Loch Maree 6154655 YP_001785897.1 CDS CLK_3760 NC_010520.1 669008 670651 D identified by match to protein family HMM PF02554; carbon starvation protein CstA 669008..670651 Clostridium botulinum A3 str. Loch Maree 6151331 YP_001785898.1 CDS CLK_3761 NC_010520.1 671191 671880 D hypothetical protein 671191..671880 Clostridium botulinum A3 str. Loch Maree 6152358 YP_001785899.1 CDS CLK_3762 NC_010520.1 672797 674788 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 672797..674788 Clostridium botulinum A3 str. Loch Maree 6151401 YP_001785900.1 CDS CLK_3763 NC_010520.1 675161 676819 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(675161..676819) Clostridium botulinum A3 str. Loch Maree 6152432 YP_001785901.1 CDS mscL NC_010520.1 677513 677914 D identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 677513..677914 Clostridium botulinum A3 str. Loch Maree 6152912 YP_001785902.1 CDS CLK_3765 NC_010520.1 678280 678963 D identified by match to protein family HMM TIGR02357; proton-coupled thiamine transporter YuaJ 678280..678963 Clostridium botulinum A3 str. Loch Maree 6154427 YP_001785903.1 CDS CLK_3766 NC_010520.1 679096 679233 R identified by Glimmer3; hypothetical protein complement(679096..679233) Clostridium botulinum A3 str. Loch Maree 6153370 YP_001785904.1 CDS CLK_3767 NC_010520.1 679487 680623 D identified by match to protein family HMM PF02810; SecC motif-containing protein 679487..680623 Clostridium botulinum A3 str. Loch Maree 6154893 YP_001785905.1 CDS CLK_3768 NC_010520.1 681205 681585 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 681205..681585 Clostridium botulinum A3 str. Loch Maree 6152496 YP_001785906.1 CDS CLK_3769 NC_010520.1 681578 682273 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 681578..682273 Clostridium botulinum A3 str. Loch Maree 6153606 YP_001785907.1 CDS CLK_3770 NC_010520.1 682273 683034 D ABC transporter permease 682273..683034 Clostridium botulinum A3 str. Loch Maree 6151840 YP_001785908.1 CDS potA NC_010520.1 684283 685365 D identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187; spermidine/putrescine ABC transporter ATP-binding protein 684283..685365 Clostridium botulinum A3 str. Loch Maree 6151622 YP_001785909.1 CDS potB NC_010520.1 685365 686324 D identified by match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease PotB 685365..686324 Clostridium botulinum A3 str. Loch Maree 6153085 YP_001785910.1 CDS CLK_3773 NC_010520.1 686327 688168 D identified by match to protein family HMM PF00528; match to protein family HMM PF01547; spermidine/putrescine ABC transporter permease/spermidine/putrescine-binding protein 686327..688168 Clostridium botulinum A3 str. Loch Maree 6153678 YP_001785911.1 CDS CLK_3774 NC_010520.1 688558 689427 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(688558..689427) Clostridium botulinum A3 str. Loch Maree 6154315 YP_001785912.1 CDS CLK_3775 NC_010520.1 689420 689554 D identified by Glimmer3; hypothetical protein 689420..689554 Clostridium botulinum A3 str. Loch Maree 6152016 YP_001785913.1 CDS CLK_3776 NC_010520.1 689733 690986 D identified by match to protein family HMM PF00375; proton/sodium-glutamate symport protein 689733..690986 Clostridium botulinum A3 str. Loch Maree 6153751 YP_001785914.1 CDS CLK_3777 NC_010520.1 691412 691543 D identified by Glimmer3; hypothetical protein 691412..691543 Clostridium botulinum A3 str. Loch Maree 6152941 YP_001785915.1 CDS CLK_3778 NC_010520.1 691700 692704 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 691700..692704 Clostridium botulinum A3 str. Loch Maree 6152982 YP_001785916.1 CDS CLK_3779 NC_010520.1 693018 693866 R identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein complement(693018..693866) Clostridium botulinum A3 str. Loch Maree 6152161 YP_001785917.1 CDS CLK_3781 NC_010520.1 694876 695088 D identified by match to protein family HMM PF01381; DNA binding protein 694876..695088 Clostridium botulinum A3 str. Loch Maree 6152594 YP_001785918.1 CDS CLK_3782 NC_010520.1 695078 695515 D identified by Glimmer3; hypothetical protein 695078..695515 Clostridium botulinum A3 str. Loch Maree 6154526 YP_001785919.1 CDS lepB NC_010520.1 695583 696191 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 695583..696191 Clostridium botulinum A3 str. Loch Maree 6153696 YP_001785920.1 CDS CLK_3784 NC_010520.1 697001 697702 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator 697001..697702 Clostridium botulinum A3 str. Loch Maree 6152896 YP_001785921.1 CDS CLK_3785 NC_010520.1 698296 698415 D identified by Glimmer3; hypothetical protein 698296..698415 Clostridium botulinum A3 str. Loch Maree 6152149 YP_001785922.1 CDS CLK_3786 NC_010520.1 698455 698580 D identified by Glimmer3; hypothetical protein 698455..698580 Clostridium botulinum A3 str. Loch Maree 6152150 YP_001785923.1 CDS CLK_3787 NC_010520.1 699274 699420 D identified by Glimmer3; hypothetical protein 699274..699420 Clostridium botulinum A3 str. Loch Maree 6154644 YP_001785924.1 CDS CLK_3788 NC_010520.1 700208 701560 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 700208..701560 Clostridium botulinum A3 str. Loch Maree 6152728 YP_001785925.1 CDS CLK_3789 NC_010520.1 701553 702143 D identified by Glimmer3; hypothetical protein 701553..702143 Clostridium botulinum A3 str. Loch Maree 6152471 YP_001785926.1 CDS CLK_3790 NC_010520.1 702180 702677 D hypothetical protein 702180..702677 Clostridium botulinum A3 str. Loch Maree 6151720 YP_001785927.1 CDS CLK_3791 NC_010520.1 702712 704424 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 702712..704424 Clostridium botulinum A3 str. Loch Maree 6154135 YP_001785928.1 CDS CLK_3792 NC_010520.1 704458 705207 D lipoprotein 704458..705207 Clostridium botulinum A3 str. Loch Maree 6152293 YP_001785929.1 CDS CLK_3793 NC_010520.1 705230 705709 D identified by match to protein family HMM PF00583; acetyltransferase 705230..705709 Clostridium botulinum A3 str. Loch Maree 6151498 YP_001785930.1 CDS CLK_3794 NC_010520.1 705706 708174 D identified by match to protein family HMM PF02687; ABC transporter permease 705706..708174 Clostridium botulinum A3 str. Loch Maree 6154954 YP_001785931.1 CDS CLK_3795 NC_010520.1 708189 708869 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 708189..708869 Clostridium botulinum A3 str. Loch Maree 6153681 YP_001785932.1 CDS CLK_3796 NC_010520.1 709391 709654 D hypothetical protein 709391..709654 Clostridium botulinum A3 str. Loch Maree 6153351 YP_001785933.1 CDS CLK_3797 NC_010520.1 709992 710858 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; degV family protein 709992..710858 Clostridium botulinum A3 str. Loch Maree 6152503 YP_001785934.1 CDS CLK_3798 NC_010520.1 711255 711767 D hypothetical protein 711255..711767 Clostridium botulinum A3 str. Loch Maree 6151757 YP_001785935.1 CDS CLK_3799 NC_010520.1 711814 711930 R identified by Glimmer3; hypothetical protein complement(711814..711930) Clostridium botulinum A3 str. Loch Maree 6152491 YP_001785936.1 CDS CLK_3800 NC_010520.1 712254 714164 D identified by match to protein family HMM PF00884; sulfatase 712254..714164 Clostridium botulinum A3 str. Loch Maree 6151695 YP_001785937.1 CDS CLK_3801 NC_010520.1 714300 715712 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(714300..715712) Clostridium botulinum A3 str. Loch Maree 6153648 YP_001785938.1 CDS CLK_3802 NC_010520.1 716160 717383 R identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804; NupC family nucleoside transporter complement(716160..717383) Clostridium botulinum A3 str. Loch Maree 6152817 YP_001785939.1 CDS asnC NC_010520.1 718461 719852 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 718461..719852 Clostridium botulinum A3 str. Loch Maree 6152041 YP_001785940.1 CDS CLK_3804 NC_010520.1 719937 721574 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; MDR-type permease complement(719937..721574) Clostridium botulinum A3 str. Loch Maree 6154935 YP_001785941.1 CDS CLK_3805 NC_010520.1 721730 722374 D identified by match to protein family HMM PF00440; AcrR family transcriptional regulator 721730..722374 Clostridium botulinum A3 str. Loch Maree 6153231 YP_001785942.1 CDS CLK_3806 NC_010520.1 722994 723314 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 722994..723314 Clostridium botulinum A3 str. Loch Maree 6152215 YP_001785943.1 CDS CLK_3807 NC_010520.1 723330 724055 D hypothetical protein 723330..724055 Clostridium botulinum A3 str. Loch Maree 6153187 YP_001785944.1 CDS CLK_3808 NC_010520.1 724354 725085 D AraC family transcriptional regulator 724354..725085 Clostridium botulinum A3 str. Loch Maree 6152360 YP_001785945.1 CDS CLK_3809 NC_010520.1 725312 726064 D identified by match to protein family HMM PF00037; 4Fe-4S ferredoxin 725312..726064 Clostridium botulinum A3 str. Loch Maree 6154652 YP_001785946.1 CDS CLK_3810 NC_010520.1 726417 726872 D identified by match to protein family HMM PF04397; LytR family transcriptional regulator 726417..726872 Clostridium botulinum A3 str. Loch Maree 6153831 YP_001785947.1 CDS CLK_3811 NC_010520.1 726874 727572 D hypothetical protein 726874..727572 Clostridium botulinum A3 str. Loch Maree 6153011 YP_001785948.1 CDS CLK_3812 NC_010520.1 727707 727907 D hypothetical protein 727707..727907 Clostridium botulinum A3 str. Loch Maree 6152151 YP_001785949.1 CDS CLK_3813 NC_010520.1 728120 729007 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 728120..729007 Clostridium botulinum A3 str. Loch Maree 6154228 YP_001785950.1 CDS CLK_3814 NC_010520.1 729436 730347 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 729436..730347 Clostridium botulinum A3 str. Loch Maree 6154816 YP_001785951.1 CDS CLK_3815 NC_010520.1 730360 730752 D identified by match to protein family HMM PF01381; DNA-binding protein 730360..730752 Clostridium botulinum A3 str. Loch Maree 6152580 YP_001785952.1 CDS CLK_0001 NC_010520.1 731350 732489 D lipoprotein 731350..732489 Clostridium botulinum A3 str. Loch Maree 6151713 YP_001785953.1 CDS CLK_0002 NC_010520.1 732686 733780 D lipoprotein 732686..733780 Clostridium botulinum A3 str. Loch Maree 6152871 YP_001785954.1 CDS CLK_0003 NC_010520.1 733955 734638 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 733955..734638 Clostridium botulinum A3 str. Loch Maree 6151842 YP_001785955.1 CDS CLK_0004 NC_010520.1 734643 736064 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 734643..736064 Clostridium botulinum A3 str. Loch Maree 6154152 YP_001785956.1 CDS CLK_0005 NC_010520.1 736105 736938 D identified by match to protein family HMM PF00583; acetyltransferase 736105..736938 Clostridium botulinum A3 str. Loch Maree 6153577 YP_001785957.1 CDS CLK_0006 NC_010520.1 737011 737145 D identified by Glimmer3; hypothetical protein 737011..737145 Clostridium botulinum A3 str. Loch Maree 6152118 YP_001785958.1 CDS CLK_0007 NC_010520.1 737261 737977 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 737261..737977 Clostridium botulinum A3 str. Loch Maree 6151552 YP_001785959.1 CDS CLK_0008 NC_010520.1 737998 738690 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 737998..738690 Clostridium botulinum A3 str. Loch Maree 6153819 YP_001785960.1 CDS CLK_0009 NC_010520.1 738719 739801 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 738719..739801 Clostridium botulinum A3 str. Loch Maree 6152784 YP_001785961.1 CDS CLK_0010 NC_010520.1 739961 741100 R hypothetical protein complement(739961..741100) Clostridium botulinum A3 str. Loch Maree 6151928 YP_001785962.1 CDS CLK_0011 NC_010520.1 741243 742055 R identified by match to protein family HMM PF00072; response regulator complement(741243..742055) Clostridium botulinum A3 str. Loch Maree 6154591 YP_001785963.1 CDS CLK_0012 NC_010520.1 742052 743350 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(742052..743350) Clostridium botulinum A3 str. Loch Maree 6152644 YP_001785964.1 CDS rodA NC_010520.1 743745 744905 D identified by match to protein family HMM PF01098; rod shape-determining protein RodA 743745..744905 Clostridium botulinum A3 str. Loch Maree 6151590 YP_001785965.1 CDS CLK_0014 NC_010520.1 744921 745067 D identified by Glimmer3; hypothetical protein 744921..745067 Clostridium botulinum A3 str. Loch Maree 6151359 YP_001785966.1 CDS cfa NC_010520.1 745084 746262 R identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; cyclopropane-fatty-acyl-phospholipid synthase complement(745084..746262) Clostridium botulinum A3 str. Loch Maree 6154448 YP_001785967.1 CDS CLK_0016 NC_010520.1 746590 747621 D identified by Glimmer3; hypothetical protein 746590..747621 Clostridium botulinum A3 str. Loch Maree 6153955 YP_001785968.1 CDS CLK_0017 NC_010520.1 747792 749471 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 747792..749471 Clostridium botulinum A3 str. Loch Maree 6152388 YP_001785969.1 CDS CLK_0018 NC_010520.1 749776 750108 D hypothetical protein 749776..750108 Clostridium botulinum A3 str. Loch Maree 6152750 YP_001785970.1 CDS cat NC_010520.1 750341 750967 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(750341..750967) Clostridium botulinum A3 str. Loch Maree 6151931 YP_001785971.1 CDS CLK_0020 NC_010520.1 751132 751749 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 751132..751749 Clostridium botulinum A3 str. Loch Maree 6153617 YP_001785972.1 CDS CLK_0021 NC_010520.1 751852 752322 D identified by match to protein family HMM PF00583; acetyltransferase 751852..752322 Clostridium botulinum A3 str. Loch Maree 6154432 YP_001785973.1 CDS csaA NC_010520.1 752389 752718 R identified by match to protein family HMM PF01588; match to protein family HMM TIGR02222; csaA protein complement(752389..752718) Clostridium botulinum A3 str. Loch Maree 6151911 YP_001785974.1 CDS CLK_0023 NC_010520.1 752926 753651 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(752926..753651) Clostridium botulinum A3 str. Loch Maree 6152800 YP_001785975.1 CDS CLK_0024 NC_010520.1 753951 754502 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; cupin domain-containing protein complement(753951..754502) Clostridium botulinum A3 str. Loch Maree 6154058 YP_001785976.1 CDS CLK_0025 NC_010520.1 754759 755349 D identified by match to protein family HMM TIGR00277; HDIG domain-containing protein 754759..755349 Clostridium botulinum A3 str. Loch Maree 6153329 YP_001785977.1 CDS CLK_0026 NC_010520.1 755716 756102 D identified by match to protein family HMM PF00903; start codon; contains InterPro domain; glyoxalase I 755716..756102 Clostridium botulinum A3 str. Loch Maree 6154107 YP_001785978.1 CDS CLK_0027 NC_010520.1 756622 758517 D identified by match to protein family HMM PF00488; MutS domain-containing protein 756622..758517 Clostridium botulinum A3 str. Loch Maree 6151785 YP_001785979.1 CDS CLK_0028 NC_010520.1 758644 759528 R identified by match to protein family HMM PF08538; hypothetical protein complement(758644..759528) Clostridium botulinum A3 str. Loch Maree 6152575 YP_001785980.1 CDS CLK_0029 NC_010520.1 759908 760786 D identified by match to protein family HMM PF07719; hypothetical protein 759908..760786 Clostridium botulinum A3 str. Loch Maree 6153827 YP_001785981.1 CDS CLK_0030 NC_010520.1 760918 761103 D hypothetical protein 760918..761103 Clostridium botulinum A3 str. Loch Maree 6152764 YP_001785982.1 CDS CLK_0031 NC_010520.1 761355 761828 R identified by match to protein family HMM PF01243; nimA protein complement(761355..761828) Clostridium botulinum A3 str. Loch Maree 6154010 YP_001785983.1 CDS CLK_0032 NC_010520.1 761851 762264 R identified by match to protein family HMM PF04304; hypothetical protein complement(761851..762264) Clostridium botulinum A3 str. Loch Maree 6154801 YP_001785984.1 CDS CLK_0033 NC_010520.1 762889 763383 D pyridoxamine 5'-phosphate oxidase 762889..763383 Clostridium botulinum A3 str. Loch Maree 6152615 YP_001785985.1 CDS CLK_0034 NC_010520.1 763592 763705 R hypothetical protein complement(763592..763705) Clostridium botulinum A3 str. Loch Maree 6153173 YP_001785986.1 CDS CLK_0035 NC_010520.1 764042 765451 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(764042..765451) Clostridium botulinum A3 str. Loch Maree 6154301 YP_001785987.1 CDS rhlE NC_010520.1 766199 767476 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase RhlE 766199..767476 Clostridium botulinum A3 str. Loch Maree 6152102 YP_001785988.1 CDS CLK_0037 NC_010520.1 768052 768540 D identified by match to protein family HMM PF02915; rubrerythrin 768052..768540 Clostridium botulinum A3 str. Loch Maree 6153130 YP_001785989.1 CDS CLK_0038 NC_010520.1 768711 769148 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 768711..769148 Clostridium botulinum A3 str. Loch Maree 6153759 YP_001785990.1 CDS CLK_0039 NC_010520.1 769176 770609 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 769176..770609 Clostridium botulinum A3 str. Loch Maree 6151609 YP_001785991.1 CDS CLK_0040 NC_010520.1 770724 771782 R identified by Glimmer3; hypothetical protein complement(770724..771782) Clostridium botulinum A3 str. Loch Maree 6152032 YP_001785992.1 CDS CLK_0041 NC_010520.1 772118 772894 R identified by match to protein family HMM PF00005; glutathione import ATP-binding protein GsiA complement(772118..772894) Clostridium botulinum A3 str. Loch Maree 6154700 YP_001785993.1 CDS CLK_0042 NC_010520.1 772878 773819 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; dipeptide transport ATP-binding protein DppD complement(772878..773819) Clostridium botulinum A3 str. Loch Maree 6153642 YP_001785994.1 CDS CLK_0043 NC_010520.1 773898 774722 R identified by match to protein family HMM PF00528; glutathione transport system permease GsiD complement(773898..774722) Clostridium botulinum A3 str. Loch Maree 6152468 YP_001785995.1 CDS CLK_0044 NC_010520.1 774724 775674 R identified by match to protein family HMM PF00528; nickel transport system permease NikB complement(774724..775674) Clostridium botulinum A3 str. Loch Maree 6154707 YP_001785996.1 CDS CLK_0045 NC_010520.1 775675 777261 R identified by match to protein family HMM PF00496; dipeptide transport protein complement(775675..777261) Clostridium botulinum A3 str. Loch Maree 6154319 YP_001785997.1 CDS CLK_0046 NC_010520.1 778038 778763 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 778038..778763 Clostridium botulinum A3 str. Loch Maree 6153544 YP_001785998.1 CDS CLK_0047 NC_010520.1 778760 779806 D identified by match to protein family HMM PF01061; ABC transporter permease 778760..779806 Clostridium botulinum A3 str. Loch Maree 6152145 YP_001785999.1 CDS CLK_0048 NC_010520.1 779922 780596 D hypothetical protein 779922..780596 Clostridium botulinum A3 str. Loch Maree 6154311 YP_001786000.1 CDS CLK_0049 NC_010520.1 780885 782075 R hypothetical protein complement(780885..782075) Clostridium botulinum A3 str. Loch Maree 6153786 YP_001786001.1 CDS CLK_0050 NC_010520.1 782200 783075 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 782200..783075 Clostridium botulinum A3 str. Loch Maree 6151732 YP_001786002.1 CDS CLK_0051 NC_010520.1 783193 783504 D hypothetical protein 783193..783504 Clostridium botulinum A3 str. Loch Maree 6151795 YP_001786003.1 CDS CLK_0052 NC_010520.1 783835 784503 D identified by match to protein family HMM PF02698; sanA protein 783835..784503 Clostridium botulinum A3 str. Loch Maree 6154689 YP_001786004.1 CDS CLK_0053 NC_010520.1 784632 787598 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; restriction/helicase domain-containing protein 784632..787598 Clostridium botulinum A3 str. Loch Maree 6153909 YP_001786005.1 CDS CLK_0054 NC_010520.1 787702 788100 R identified by match to protein family HMM PF00293; mutator mutT protein complement(787702..788100) Clostridium botulinum A3 str. Loch Maree 6153068 YP_001786006.1 CDS CLK_0055 NC_010520.1 788564 789400 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator 788564..789400 Clostridium botulinum A3 str. Loch Maree 6151774 YP_001786007.1 CDS CLK_0056 NC_010520.1 789608 791449 D identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; match to protein family HMM TIGR01995; PTS system beta-glucoside-specific transporter subunit IIABC 789608..791449 Clostridium botulinum A3 str. Loch Maree 6154215 YP_001786008.1 CDS CLK_0057 NC_010520.1 791461 792279 D identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein 791461..792279 Clostridium botulinum A3 str. Loch Maree 6154752 YP_001786009.1 CDS CLK_0058 NC_010520.1 792910 793620 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator 792910..793620 Clostridium botulinum A3 str. Loch Maree 6152590 YP_001786010.1 CDS CLK_0059 NC_010520.1 793778 795010 D identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase 793778..795010 Clostridium botulinum A3 str. Loch Maree 6152981 YP_001786011.1 CDS CLK_0060 NC_010520.1 795302 796000 D identified by match to protein family HMM PF01814; match to protein family HMM PF04405; scdA protein 795302..796000 Clostridium botulinum A3 str. Loch Maree 6153795 YP_001786012.1 CDS CLK_0061 NC_010520.1 796026 796688 D identified by match to protein family HMM PF01814; match to protein family HMM PF04282; hypothetical protein 796026..796688 Clostridium botulinum A3 str. Loch Maree 6154984 YP_001786013.1 CDS CLK_0062 NC_010520.1 797031 797606 D dna-3-methyladenineglycosylase i; 3-methyladenine-dna glycosylase i, constitutive; tagi; dna-3-methyladenine glycosidase i; identified by match to protein family HMM PF03352; DNA-3-methyladenine glycosylase 1 797031..797606 Clostridium botulinum A3 str. Loch Maree 6152115 YP_001786014.1 CDS gltS NC_010520.1 798377 799561 D identified by match to protein family HMM PF03616; match to protein family HMM TIGR00210; sodium/glutamate symporter 798377..799561 Clostridium botulinum A3 str. Loch Maree 6153461 YP_001786015.1 CDS CLK_0064 NC_010520.1 799833 800288 D hypothetical protein 799833..800288 Clostridium botulinum A3 str. Loch Maree 6151348 YP_001786016.1 CDS CLK_0065 NC_010520.1 800564 800983 R identified by Glimmer3; hypothetical protein complement(800564..800983) Clostridium botulinum A3 str. Loch Maree 6152343 YP_001786017.1 CDS CLK_0066 NC_010520.1 801728 802786 D identified by match to protein family HMM PF01497; iron ABC transporter iron-binding protein 801728..802786 Clostridium botulinum A3 str. Loch Maree 6153368 YP_001786018.1 CDS CLK_0067 NC_010520.1 802856 803881 D identified by match to protein family HMM PF01032; Fe uptake system integral membrane protein 802856..803881 Clostridium botulinum A3 str. Loch Maree 6154951 YP_001786019.1 CDS CLK_0068 NC_010520.1 803888 804646 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 803888..804646 Clostridium botulinum A3 str. Loch Maree 6154905 YP_001786020.1 CDS CLK_0069 NC_010520.1 804667 804990 D identified by match to protein family HMM PF08821; CGGC domain-containing protein 804667..804990 Clostridium botulinum A3 str. Loch Maree 6151820 YP_001786021.1 CDS CLK_0070 NC_010520.1 805371 805838 D hypothetical protein 805371..805838 Clostridium botulinum A3 str. Loch Maree 6151901 YP_001786022.1 CDS CLK_0071 NC_010520.1 805845 807194 D hypothetical protein 805845..807194 Clostridium botulinum A3 str. Loch Maree 6154370 YP_001786023.1 CDS CLK_0072 NC_010520.1 807431 807634 R identified by Glimmer3; hypothetical protein complement(807431..807634) Clostridium botulinum A3 str. Loch Maree 6154064 YP_001786024.1 CDS CLK_0073 NC_010520.1 808101 809087 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 808101..809087 Clostridium botulinum A3 str. Loch Maree 6152745 YP_001786025.1 CDS CLK_0074 NC_010520.1 809429 810322 D identified by match to protein family HMM PF02653; ABC transporter permease 809429..810322 Clostridium botulinum A3 str. Loch Maree 6153690 YP_001786026.1 CDS CLK_0075 NC_010520.1 810285 811040 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 810285..811040 Clostridium botulinum A3 str. Loch Maree 6153084 YP_001786027.1 CDS CLK_0076 NC_010520.1 811071 812042 D identified by match to protein family HMM PF04392; ABC transporter substrate-binding protein 811071..812042 Clostridium botulinum A3 str. Loch Maree 6152057 YP_001786028.1 CDS blaI NC_010520.1 812773 813153 D identified by match to protein family HMM PF03965; penicillinase repressor 812773..813153 Clostridium botulinum A3 str. Loch Maree 6151451 YP_001786029.1 CDS CLK_0078 NC_010520.1 813193 815406 D identified by match to protein family HMM PF05569; peptidase, M56 family protein 813193..815406 Clostridium botulinum A3 str. Loch Maree 6154519 YP_001786030.1 CDS CLK_0079 NC_010520.1 815615 817036 R identified by Glimmer3; hypothetical protein complement(815615..817036) Clostridium botulinum A3 str. Loch Maree 6153286 YP_001786031.1 CDS CLK_0080 NC_010520.1 817033 817596 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(817033..817596) Clostridium botulinum A3 str. Loch Maree 6152546 YP_001786032.1 CDS CLK_0081 NC_010520.1 817845 817976 D small GTP-binding protein 817845..817976 Clostridium botulinum A3 str. Loch Maree 6151744 YP_001786033.1 CDS CLK_0082 NC_010520.1 818037 818975 D identified by match to protein family HMM PF01207; dihydrouridine synthase 818037..818975 Clostridium botulinum A3 str. Loch Maree 6154182 YP_001786034.1 CDS greA NC_010520.1 819132 819596 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 819132..819596 Clostridium botulinum A3 str. Loch Maree 6152442 YP_001786035.1 CDS CLK_0084 NC_010520.1 819764 820516 D hypothetical protein 819764..820516 Clostridium botulinum A3 str. Loch Maree 6152421 YP_001786036.1 CDS CLK_0085 NC_010520.1 820756 820878 D identified by Glimmer3; hypothetical protein 820756..820878 Clostridium botulinum A3 str. Loch Maree 6151432 YP_001786037.1 CDS CLK_0086 NC_010520.1 821070 821891 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 821070..821891 Clostridium botulinum A3 str. Loch Maree 6154546 YP_001786038.1 CDS CLK_0087 NC_010520.1 822442 823431 D identified by match to protein family HMM PF01497; ferrichrome ABC transporter ferrichrome-binding protein 822442..823431 Clostridium botulinum A3 str. Loch Maree 6152855 YP_001786039.1 CDS fhuB NC_010520.1 823527 824567 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease FhuB 823527..824567 Clostridium botulinum A3 str. Loch Maree 6154919 YP_001786040.1 CDS fhuG NC_010520.1 824564 825607 D identified by match to protein family HMM PF01032; ferrichrome ABC transporter permease FhuG 824564..825607 Clostridium botulinum A3 str. Loch Maree 6153966 YP_001786041.1 CDS CLK_0090 NC_010520.1 825783 826568 D identified by match to protein family HMM PF00005; ferrichrome ABC transporter ATP-binding protein 825783..826568 Clostridium botulinum A3 str. Loch Maree 6152808 YP_001786042.1 CDS nifH NC_010520.1 826585 827334 D identified by match to protein family HMM PF00142; nitrogenase iron protein 826585..827334 Clostridium botulinum A3 str. Loch Maree 6153423 YP_001786043.1 CDS CLK_0092 NC_010520.1 827337 828605 D identified by Glimmer3; hypothetical protein 827337..828605 Clostridium botulinum A3 str. Loch Maree 6154178 YP_001786044.1 CDS CLK_0093 NC_010520.1 828645 829883 D identified by Glimmer3; hypothetical protein 828645..829883 Clostridium botulinum A3 str. Loch Maree 6151725 YP_001786045.1 CDS CLK_0094 NC_010520.1 830207 832219 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 830207..832219 Clostridium botulinum A3 str. Loch Maree 6151565 YP_001786046.1 CDS CLK_0095 NC_010520.1 832481 832720 D identified by Glimmer3; hypothetical protein 832481..832720 Clostridium botulinum A3 str. Loch Maree 6152646 YP_001786047.1 CDS CLK_0096 NC_010520.1 832800 834209 R hypothetical protein complement(832800..834209) Clostridium botulinum A3 str. Loch Maree 6154976 YP_001786048.1 CDS gcvT NC_010520.1 834787 835899 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 834787..835899 Clostridium botulinum A3 str. Loch Maree 6152135 YP_001786049.1 CDS gcvH NC_010520.1 836024 836416 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 836024..836416 Clostridium botulinum A3 str. Loch Maree 6153635 YP_001786050.1 CDS gcvPA NC_010520.1 836419 837759 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 836419..837759 Clostridium botulinum A3 str. Loch Maree 6154337 YP_001786051.1 CDS gcvPB NC_010520.1 837759 839213 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 837759..839213 Clostridium botulinum A3 str. Loch Maree 6152085 YP_001786052.1 CDS lpdA NC_010520.1 839402 840790 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoyl dehydrogenase 839402..840790 Clostridium botulinum A3 str. Loch Maree 6154532 YP_001786053.1 CDS CLK_0102 NC_010520.1 840807 841784 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 840807..841784 Clostridium botulinum A3 str. Loch Maree 6153694 YP_001786054.1 CDS CLK_0103 NC_010520.1 842278 842535 D hypothetical protein 842278..842535 Clostridium botulinum A3 str. Loch Maree 6153114 YP_001786055.1 CDS CLK_0104 NC_010520.1 842928 843494 D identified by match to protein family HMM PF00583; acetyltransferase 842928..843494 Clostridium botulinum A3 str. Loch Maree 6152320 YP_001786056.1 CDS CLK_0105 NC_010520.1 843881 844429 D transposase and inactivated derivatives 843881..844429 Clostridium botulinum A3 str. Loch Maree 6154783 YP_001786057.1 CDS CLK_0106 NC_010520.1 844426 845124 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 844426..845124 Clostridium botulinum A3 str. Loch Maree 6153999 YP_001786058.1 CDS CLK_0107 NC_010520.1 845121 846158 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 845121..846158 Clostridium botulinum A3 str. Loch Maree 6153516 YP_001786059.1 CDS CLK_0108 NC_010520.1 846231 846914 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 846231..846914 Clostridium botulinum A3 str. Loch Maree 6152880 YP_001786060.1 CDS CLK_0109 NC_010520.1 846919 847281 R identified by Glimmer3; hypothetical protein complement(846919..847281) Clostridium botulinum A3 str. Loch Maree 6151333 YP_001786061.1 CDS CLK_0110 NC_010520.1 847232 848713 D identified by match to protein family HMM PF02687; ABC transporter permease 847232..848713 Clostridium botulinum A3 str. Loch Maree 6152916 YP_001786062.1 CDS CLK_0111 NC_010520.1 849467 849955 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 849467..849955 Clostridium botulinum A3 str. Loch Maree 6153339 YP_001786063.1 CDS CLK_0112 NC_010520.1 850187 850774 D identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 850187..850774 Clostridium botulinum A3 str. Loch Maree 6154150 YP_001786064.1 CDS CLK_0113 NC_010520.1 850859 850993 D identified by Glimmer3; hypothetical protein 850859..850993 Clostridium botulinum A3 str. Loch Maree 6152476 YP_001786065.1 CDS CLK_0114 NC_010520.1 851267 852103 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 851267..852103 Clostridium botulinum A3 str. Loch Maree 6151875 YP_001786066.1 CDS CLK_0115 NC_010520.1 852197 852745 D identified by Glimmer3; hypothetical protein 852197..852745 Clostridium botulinum A3 str. Loch Maree 6154134 YP_001786067.1 CDS CLK_0116 NC_010520.1 852929 853093 D hypothetical protein 852929..853093 Clostridium botulinum A3 str. Loch Maree 6153568 YP_001786068.1 CDS CLK_0117 NC_010520.1 853095 853664 D hypothetical protein 853095..853664 Clostridium botulinum A3 str. Loch Maree 6152056 YP_001786069.1 CDS CLK_0118 NC_010520.1 853905 854777 R identified by Glimmer3; hypothetical protein complement(853905..854777) Clostridium botulinum A3 str. Loch Maree 6151494 YP_001786070.1 CDS CLK_0119 NC_010520.1 856022 856666 D identified by match to protein family HMM PF00376; transcriptional regulator, MerR family protein 856022..856666 Clostridium botulinum A3 str. Loch Maree 6153745 YP_001786071.1 CDS CLK_0120 NC_010520.1 856680 857255 D rhoptry protein 856680..857255 Clostridium botulinum A3 str. Loch Maree 6154365 YP_001786072.1 CDS CLK_0121 NC_010520.1 857536 858792 D hypothetical protein 857536..858792 Clostridium botulinum A3 str. Loch Maree 6151460 YP_001786073.1 CDS CLK_0122 NC_010520.1 858826 859308 D hypothetical protein 858826..859308 Clostridium botulinum A3 str. Loch Maree 6152132 YP_001786074.1 CDS CLK_0123 NC_010520.1 859354 860136 D hypothetical protein 859354..860136 Clostridium botulinum A3 str. Loch Maree 6153991 YP_001786075.1 CDS CLK_0124 NC_010520.1 860499 861332 D identified by Glimmer3; hypothetical protein 860499..861332 Clostridium botulinum A3 str. Loch Maree 6154779 YP_001786076.1 CDS CLK_0125 NC_010520.1 861638 862402 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 861638..862402 Clostridium botulinum A3 str. Loch Maree 6151863 YP_001786077.1 CDS CLK_0126 NC_010520.1 862454 863185 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 862454..863185 Clostridium botulinum A3 str. Loch Maree 6152706 YP_001786078.1 CDS CLK_0127 NC_010520.1 863172 863915 D identified by match to protein family HMM PF01061; drug resistance ABC-2 type transporter permease 863172..863915 Clostridium botulinum A3 str. Loch Maree 6152390 YP_001786079.1 CDS CLK_0128 NC_010520.1 864609 866000 D identified by Glimmer3; hypothetical protein 864609..866000 Clostridium botulinum A3 str. Loch Maree 6153169 YP_001786080.1 CDS CLK_0129 NC_010520.1 866270 866722 D identified by match to protein family HMM PF00583; acetyltransferase 866270..866722 Clostridium botulinum A3 str. Loch Maree 6153989 YP_001786081.1 CDS CLK_0130 NC_010520.1 867122 867238 D identified by Glimmer3; hypothetical protein 867122..867238 Clostridium botulinum A3 str. Loch Maree 6151574 YP_001786082.1 CDS CLK_0131 NC_010520.1 867294 868259 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 867294..868259 Clostridium botulinum A3 str. Loch Maree 6152558 YP_001786083.1 CDS CLK_0132 NC_010520.1 868733 869731 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-ACP synthase complement(868733..869731) Clostridium botulinum A3 str. Loch Maree 6154596 YP_001786084.1 CDS CLK_0133 NC_010520.1 869980 871446 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 869980..871446 Clostridium botulinum A3 str. Loch Maree 6154582 YP_001786085.1 CDS CLK_0134 NC_010520.1 872216 872506 D hypothetical protein 872216..872506 Clostridium botulinum A3 str. Loch Maree 6152137 YP_001786086.1 CDS CLK_0135 NC_010520.1 872705 874258 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 872705..874258 Clostridium botulinum A3 str. Loch Maree 6153002 YP_001786087.1 CDS CLK_0136 NC_010520.1 874357 874491 D identified by Glimmer3; hypothetical protein 874357..874491 Clostridium botulinum A3 str. Loch Maree 6153391 YP_001786088.1 CDS CLK_0137 NC_010520.1 874593 875165 D identified by match to protein family HMM PF01965; ThiJ/PfpI family intracellular protease 874593..875165 Clostridium botulinum A3 str. Loch Maree 6153321 YP_001786089.1 CDS CLK_0138 NC_010520.1 875442 875558 D identified by Glimmer3; hypothetical protein 875442..875558 Clostridium botulinum A3 str. Loch Maree 6154145 YP_001786090.1 CDS CLK_0139 NC_010520.1 875757 876227 D identified by Glimmer3; hypothetical protein 875757..876227 Clostridium botulinum A3 str. Loch Maree 6152828 YP_001786091.1 CDS CLK_0140 NC_010520.1 876430 877338 R identified by match to protein family HMM PF00291; cysteine synthase complement(876430..877338) Clostridium botulinum A3 str. Loch Maree 6154501 YP_001786092.1 CDS luxS NC_010520.1 877322 877774 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(877322..877774) Clostridium botulinum A3 str. Loch Maree 6151436 YP_001786093.1 CDS metC NC_010520.1 877776 878918 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase complement(877776..878918) Clostridium botulinum A3 str. Loch Maree 6152424 YP_001786094.1 CDS CLK_0143 NC_010520.1 879200 879826 R identified by match to protein family HMM PF01209; match to protein family HMM PF02390; match to protein family HMM PF08241; match to protein family HMM PF08242; SAM-dependent methyltransferase complement(879200..879826) Clostridium botulinum A3 str. Loch Maree 6153206 YP_001786095.1 CDS CLK_0144 NC_010520.1 880735 882588 D identified by match to protein family HMM PF00704; glycosyl hydrolase 880735..882588 Clostridium botulinum A3 str. Loch Maree 6154431 YP_001786096.1 CDS CLK_0145 NC_010520.1 882954 883193 D identified by match to protein family HMM PF00403; mercuric transport periplasmic protein 882954..883193 Clostridium botulinum A3 str. Loch Maree 6152051 YP_001786097.1 CDS CLK_0146 NC_010520.1 883301 883633 R hypothetical protein complement(883301..883633) Clostridium botulinum A3 str. Loch Maree 6152304 YP_001786098.1 CDS CLK_0147 NC_010520.1 883721 884221 R identified by match to protein family HMM PF06172; hypothetical protein complement(883721..884221) Clostridium botulinum A3 str. Loch Maree 6153664 YP_001786099.1 CDS CLK_0148 NC_010520.1 884755 885363 R identified by Glimmer3; hypothetical protein complement(884755..885363) Clostridium botulinum A3 str. Loch Maree 6154853 YP_001786100.1 CDS CLK_0149 NC_010520.1 885491 885928 R identified by Glimmer3; hypothetical protein complement(885491..885928) Clostridium botulinum A3 str. Loch Maree 6154374 YP_001786101.1 CDS CLK_0150 NC_010520.1 886310 886732 R identified by match to protein family HMM PF01381; DNA-binding protein complement(886310..886732) Clostridium botulinum A3 str. Loch Maree 6153042 YP_001786102.1 CDS CLK_0151 NC_010520.1 886876 887076 D identified by match to protein family HMM PF01381; DNA-binding protein 886876..887076 Clostridium botulinum A3 str. Loch Maree 6154256 YP_001786103.1 CDS CLK_0152 NC_010520.1 887236 888495 D identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446; dnaD protein 887236..888495 Clostridium botulinum A3 str. Loch Maree 6151407 YP_001786104.1 CDS CLK_0153 NC_010520.1 888514 889053 D identified by match to protein family HMM TIGR02937; sigma-70 family RNA polymerase sigma factor 888514..889053 Clostridium botulinum A3 str. Loch Maree 6153667 YP_001786105.1 CDS CLK_0154 NC_010520.1 889305 889484 D hypothetical protein 889305..889484 Clostridium botulinum A3 str. Loch Maree 6153053 YP_001786106.1 CDS CLK_0155 NC_010520.1 889635 890465 D identified by Glimmer3; hypothetical protein 889635..890465 Clostridium botulinum A3 str. Loch Maree 6152681 YP_001786107.1 CDS CLK_0156 NC_010520.1 890833 891054 D hypothetical protein 890833..891054 Clostridium botulinum A3 str. Loch Maree 6151664 YP_001786108.1 CDS CLK_0157 NC_010520.1 891074 891301 D hypothetical protein 891074..891301 Clostridium botulinum A3 str. Loch Maree 6153178 YP_001786109.1 CDS CLK_0158 NC_010520.1 891523 891654 R identified by match to protein family HMM PF01638; HxlR family transcriptional regulator complement(891523..891654) Clostridium botulinum A3 str. Loch Maree 6152620 YP_001786110.1 CDS CLK_0159 NC_010520.1 891713 891940 D identified by Glimmer3; hypothetical protein 891713..891940 Clostridium botulinum A3 str. Loch Maree 6152218 YP_001786111.1 CDS CLK_0160 NC_010520.1 891895 892020 D identified by Glimmer3; hypothetical protein 891895..892020 Clostridium botulinum A3 str. Loch Maree 6152042 YP_001786112.1 CDS CLK_0161 NC_010520.1 892430 893032 D identified by match to protein family HMM PF01047; transcriptional regulator 892430..893032 Clostridium botulinum A3 str. Loch Maree 6154688 YP_001786113.1 CDS CLK_0162 NC_010520.1 893032 894816 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; multidrug resistance ABC transporter ATP-binding protein/permease 893032..894816 Clostridium botulinum A3 str. Loch Maree 6153705 YP_001786114.1 CDS CLK_0163 NC_010520.1 894974 895093 D identified by Glimmer3; hypothetical protein 894974..895093 Clostridium botulinum A3 str. Loch Maree 6152659 YP_001786115.1 CDS CLK_0164 NC_010520.1 895526 895882 R identified by Glimmer3; hypothetical protein complement(895526..895882) Clostridium botulinum A3 str. Loch Maree 6151586 YP_001786116.1 CDS arsC NC_010520.1 896329 896568 D arsenate reductase 896329..896568 Clostridium botulinum A3 str. Loch Maree 6154218 YP_001786117.1 CDS CLK_0166 NC_010520.1 896933 897250 D identified by match to protein family HMM PF01022; arsenical resistance operon repressor 896933..897250 Clostridium botulinum A3 str. Loch Maree 6153073 YP_001786118.1 CDS CLK_0169 NC_010520.1 898766 899317 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 898766..899317 Clostridium botulinum A3 str. Loch Maree 6154600 YP_001786119.1 CDS CLK_0170 NC_010520.1 899719 900252 D hypothetical protein 899719..900252 Clostridium botulinum A3 str. Loch Maree 6153341 YP_001786120.1 CDS CLK_0171 NC_010520.1 900688 901266 D transcriptional regulator 900688..901266 Clostridium botulinum A3 str. Loch Maree 6152422 YP_001786121.1 CDS CLK_0172 NC_010520.1 901276 901533 D identified by Glimmer3; hypothetical protein 901276..901533 Clostridium botulinum A3 str. Loch Maree 6151700 YP_001786122.1 CDS CLK_0173 NC_010520.1 902084 903016 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 902084..903016 Clostridium botulinum A3 str. Loch Maree 6154326 YP_001786123.1 CDS CLK_0174 NC_010520.1 903009 904145 D hypothetical protein 903009..904145 Clostridium botulinum A3 str. Loch Maree 6154721 YP_001786124.1 CDS CLK_0175 NC_010520.1 904782 905243 D hypothetical protein 904782..905243 Clostridium botulinum A3 str. Loch Maree 6153652 YP_001786125.1 CDS thyA NC_010520.1 905233 906207 D identified by match to protein family HMM PF00303; thymidylate synthase 905233..906207 Clostridium botulinum A3 str. Loch Maree 6153062 YP_001786126.1 CDS CLK_0177 NC_010520.1 906219 906977 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 906219..906977 Clostridium botulinum A3 str. Loch Maree 6152097 YP_001786127.1 CDS CLK_0178 NC_010520.1 907023 908237 D thiaminase I 907023..908237 Clostridium botulinum A3 str. Loch Maree 6154243 YP_001786128.1 CDS thiD NC_010520.1 908315 909142 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 908315..909142 Clostridium botulinum A3 str. Loch Maree 6153275 YP_001786129.1 CDS CLK_0180 NC_010520.1 909314 909547 D identified by Glimmer3; hypothetical protein 909314..909547 Clostridium botulinum A3 str. Loch Maree 6154176 YP_001786130.1 CDS CLK_0181 NC_010520.1 909972 910436 R identified by match to protein family HMM PF06695; transporter complement(909972..910436) Clostridium botulinum A3 str. Loch Maree 6153656 YP_001786131.1 CDS CLK_0182 NC_010520.1 910841 911629 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 910841..911629 Clostridium botulinum A3 str. Loch Maree 6152645 YP_001786132.1 CDS CLK_0183 NC_010520.1 911632 913317 D ABC transporter permease 911632..913317 Clostridium botulinum A3 str. Loch Maree 6152450 YP_001786133.1 CDS CLK_0184 NC_010520.1 913281 913430 D two component sensor kinase 913281..913430 Clostridium botulinum A3 str. Loch Maree 6151528 YP_001786134.1 CDS CLK_0185 NC_010520.1 914126 915121 D hypothetical protein 914126..915121 Clostridium botulinum A3 str. Loch Maree 6154488 YP_001786135.1 CDS CLK_0186 NC_010520.1 915392 916417 D hypothetical protein 915392..916417 Clostridium botulinum A3 str. Loch Maree 6153450 YP_001786136.1 CDS CLK_0187 NC_010520.1 916601 917293 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 916601..917293 Clostridium botulinum A3 str. Loch Maree 6152815 YP_001786137.1 CDS CLK_0188 NC_010520.1 917280 919976 D identified by match to protein family HMM PF02687; ABC transporter permease 917280..919976 Clostridium botulinum A3 str. Loch Maree 6151850 YP_001786138.1 CDS CLK_0189 NC_010520.1 920488 920607 D identified by Glimmer3; hypothetical protein 920488..920607 Clostridium botulinum A3 str. Loch Maree 6154994 YP_001786139.1 CDS CLK_0190 NC_010520.1 920747 921460 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 920747..921460 Clostridium botulinum A3 str. Loch Maree 6154255 YP_001786140.1 CDS CLK_0191 NC_010520.1 921614 922876 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 921614..922876 Clostridium botulinum A3 str. Loch Maree 6152921 YP_001786141.1 CDS CLK_0192 NC_010520.1 923066 923707 D identified by match to protein family HMM PF06555; hypothetical protein 923066..923707 Clostridium botulinum A3 str. Loch Maree 6152624 YP_001786142.1 CDS CLK_0193 NC_010520.1 923798 923986 R identified by match to protein family HMM TIGR02861; small acid-soluble spore protein, H-type complement(923798..923986) Clostridium botulinum A3 str. Loch Maree 6152682 YP_001786143.1 CDS CLK_0194 NC_010520.1 924316 925095 D hypothetical protein 924316..925095 Clostridium botulinum A3 str. Loch Maree 6153234 YP_001786144.1 CDS CLK_0195 NC_010520.1 925768 926748 D hypothetical protein 925768..926748 Clostridium botulinum A3 str. Loch Maree 6151818 YP_001786145.1 CDS hypB NC_010520.1 927017 927685 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 927017..927685 Clostridium botulinum A3 str. Loch Maree 6151642 YP_001786146.1 CDS CLK_0197 NC_010520.1 927723 930419 D identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 927723..930419 Clostridium botulinum A3 str. Loch Maree 6153944 YP_001786147.1 CDS CLK_0198 NC_010520.1 930502 930843 D identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein 930502..930843 Clostridium botulinum A3 str. Loch Maree 6154970 YP_001786148.1 CDS CLK_0199 NC_010520.1 930977 931432 D identified by match to protein family HMM PF06445; DNA gyrase inhibitory protein GyrI 930977..931432 Clostridium botulinum A3 str. Loch Maree 6151422 YP_001786149.1 CDS dapB NC_010520.1 932113 932910 D identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 932113..932910 Clostridium botulinum A3 str. Loch Maree 6151630 YP_001786150.1 CDS CLK_0201 NC_010520.1 932932 933771 D identified by match to protein family HMM PF00581; sulfurtransferase 932932..933771 Clostridium botulinum A3 str. Loch Maree 6154741 YP_001786151.1 CDS CLK_0202 NC_010520.1 934326 934910 D identified by Glimmer3; hypothetical protein 934326..934910 Clostridium botulinum A3 str. Loch Maree 6153700 YP_001786152.1 CDS CLK_0203 NC_010520.1 935007 935201 D identified by Glimmer3; hypothetical protein 935007..935201 Clostridium botulinum A3 str. Loch Maree 6152967 YP_001786153.1 CDS CLK_0204 NC_010520.1 935627 936154 D contains InterPro domain; identified by match to protein family HMM PF00293; isopentenyl-diphosphate delta-isomerase 935627..936154 Clostridium botulinum A3 str. Loch Maree 6152018 YP_001786154.1 CDS CLK_0205 NC_010520.1 936497 936919 D hypothetical protein 936497..936919 Clostridium botulinum A3 str. Loch Maree 6153300 YP_001786155.1 CDS CLK_0206 NC_010520.1 937206 937622 D identified by match to protein family HMM PF04463; hypothetical protein 937206..937622 Clostridium botulinum A3 str. Loch Maree 6152270 YP_001786156.1 CDS CLK_0207 NC_010520.1 937682 938194 D hypothetical protein 937682..938194 Clostridium botulinum A3 str. Loch Maree 6151704 YP_001786157.1 CDS CLK_0208 NC_010520.1 938306 939754 D identified by match to protein family HMM PF00144; beta-lactamase 938306..939754 Clostridium botulinum A3 str. Loch Maree 6154743 YP_001786158.1 CDS CLK_0209 NC_010520.1 939947 940552 D identified by match to protein family HMM PF01381; DNA-binding protein 939947..940552 Clostridium botulinum A3 str. Loch Maree 6153712 YP_001786159.1 CDS CLK_0210 NC_010520.1 941169 941792 D identified by match to protein family HMM PF04892; VanZF 941169..941792 Clostridium botulinum A3 str. Loch Maree 6153354 YP_001786160.1 CDS CLK_0211 NC_010520.1 941920 942285 D hypothetical protein 941920..942285 Clostridium botulinum A3 str. Loch Maree 6152693 YP_001786161.1 CDS CLK_0212 NC_010520.1 942706 944112 D identified by Glimmer3; hypothetical protein 942706..944112 Clostridium botulinum A3 str. Loch Maree 6153258 YP_001786162.1 CDS CLK_0213 NC_010520.1 944448 945617 D identified by match to protein family HMM PF01979; amidohydrolase 944448..945617 Clostridium botulinum A3 str. Loch Maree 6154718 YP_001786163.1 CDS brnQ NC_010520.1 946183 947487 D identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 946183..947487 Clostridium botulinum A3 str. Loch Maree 6151864 YP_001786164.1 CDS CLK_0215 NC_010520.1 947665 950145 R identified by match to protein family HMM PF00015; match to protein family HMM PF00496; methyl-accepting chemotaxis protein/ extracellular solute-binding protein family 5 complement(947665..950145) Clostridium botulinum A3 str. Loch Maree 6153057 YP_001786165.1 CDS feoA NC_010520.1 950368 950604 D identified by match to protein family HMM PF04023; ferrous iron transport protein A 950368..950604 Clostridium botulinum A3 str. Loch Maree 6153886 YP_001786166.1 CDS feoB NC_010520.1 950748 951530 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; ferrous iron transport protein B 950748..951530 Clostridium botulinum A3 str. Loch Maree 6151457 YP_001786167.1 CDS feoB-1 NC_010520.1 951527 953050 D identified by match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; ferrous iron transport protein B 951527..953050 Clostridium botulinum A3 str. Loch Maree 6152253 YP_001786168.1 CDS cobC NC_010520.1 953724 954338 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR03162; alpha-ribazole-5'-phosphate phosphatase 953724..954338 Clostridium botulinum A3 str. Loch Maree 6151463 YP_001786169.1 CDS CLK_0219 NC_010520.1 954322 954480 R identified by Glimmer3; hypothetical protein complement(954322..954480) Clostridium botulinum A3 str. Loch Maree 6153437 YP_001786170.1 CDS CLK_0221 NC_010520.1 954629 956185 D identified by match to protein family HMM PF04294; match to protein family HMM PF07501; von Willebrand factor A 954629..956185 Clostridium botulinum A3 str. Loch Maree 6152607 YP_001786171.1 CDS cobS NC_010520.1 956455 957201 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 956455..957201 Clostridium botulinum A3 str. Loch Maree 6154303 YP_001786172.1 CDS CLK_0223 NC_010520.1 957477 958262 D hypothetical protein 957477..958262 Clostridium botulinum A3 str. Loch Maree 6152444 YP_001786173.1 CDS CLK_0224 NC_010520.1 958320 958607 D hypothetical protein 958320..958607 Clostridium botulinum A3 str. Loch Maree 6153482 YP_001786174.1 CDS CLK_0225 NC_010520.1 958732 958914 D hypothetical protein 958732..958914 Clostridium botulinum A3 str. Loch Maree 6154529 YP_001786175.1 CDS CLK_0226 NC_010520.1 958932 959180 D identified by match to protein family HMM PF07875; hypothetical protein 958932..959180 Clostridium botulinum A3 str. Loch Maree 6152762 YP_001786176.1 CDS CLK_0227 NC_010520.1 959707 961059 D hypothetical protein 959707..961059 Clostridium botulinum A3 str. Loch Maree 6151811 YP_001786177.1 CDS CLK_0228 NC_010520.1 961236 961568 R identified by match to protein family HMM PF08821; CGGC domain-containing protein complement(961236..961568) Clostridium botulinum A3 str. Loch Maree 6152900 YP_001786178.1 CDS CLK_0229 NC_010520.1 961853 962206 D identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367; 6-pyruvoyl-tetrahydropterin synthase 961853..962206 Clostridium botulinum A3 str. Loch Maree 6153974 YP_001786179.1 CDS folP NC_010520.1 962298 963485 D identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 962298..963485 Clostridium botulinum A3 str. Loch Maree 6154962 YP_001786180.1 CDS CLK_0231 NC_010520.1 963649 963900 D hypothetical protein 963649..963900 Clostridium botulinum A3 str. Loch Maree 6152252 YP_001786181.1 CDS folK NC_010520.1 964000 964455 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 964000..964455 Clostridium botulinum A3 str. Loch Maree 6153146 YP_001786182.1 CDS CLK_0233 NC_010520.1 964574 965014 D identified by match to protein family HMM PF00011; heat shock protein 964574..965014 Clostridium botulinum A3 str. Loch Maree 6154497 YP_001786183.1 CDS CLK_0234 NC_010520.1 965298 966650 D identified by match to protein family HMM PF00376; match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; MerR family transcriptional regulator 965298..966650 Clostridium botulinum A3 str. Loch Maree 6153324 YP_001786184.1 CDS CLK_0235 NC_010520.1 966705 967880 D identified by match to protein family HMM PF01041; match to protein family HMM PF01053; exopolysaccharide biosynthesis protein 966705..967880 Clostridium botulinum A3 str. Loch Maree 6154500 YP_001786185.1 CDS CLK_0236 NC_010520.1 968142 969263 D identified by match to protein family HMM PF01041; pleiotropic regulatory protein 968142..969263 Clostridium botulinum A3 str. Loch Maree 6153433 YP_001786186.1 CDS CLK_0237 NC_010520.1 969835 970506 D identified by match to protein family HMM PF03596; quaternary ammonium compound-resistance protein 969835..970506 Clostridium botulinum A3 str. Loch Maree 6152870 YP_001786187.1 CDS CLK_0238 NC_010520.1 970860 971489 D identified by match to protein family HMM PF02517; CAAX amino protease 970860..971489 Clostridium botulinum A3 str. Loch Maree 6151882 YP_001786188.1 CDS uppS NC_010520.1 971959 972678 D identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 971959..972678 Clostridium botulinum A3 str. Loch Maree 6154981 YP_001786189.1 CDS CLK_0240 NC_010520.1 972866 973495 D identified by match to protein family HMM PF08901; metal-binding protein 972866..973495 Clostridium botulinum A3 str. Loch Maree 6153735 YP_001786190.1 CDS CLK_0241 NC_010520.1 973839 974351 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02954; ECF subfamily RNA polymerase sigma factor 973839..974351 Clostridium botulinum A3 str. Loch Maree 6153097 YP_001786191.1 CDS CLK_0242 NC_010520.1 974356 975519 D identified by Glimmer3; hypothetical protein 974356..975519 Clostridium botulinum A3 str. Loch Maree 6151801 YP_001786192.1 CDS CLK_0243 NC_010520.1 976076 976480 D identified by Glimmer3; hypothetical protein 976076..976480 Clostridium botulinum A3 str. Loch Maree 6152329 YP_001786193.1 CDS CLK_0244 NC_010520.1 976573 976908 D hypothetical protein 976573..976908 Clostridium botulinum A3 str. Loch Maree 6151551 YP_001786194.1 CDS CLK_0245 NC_010520.1 977185 977739 R flavoredoxin complement(977185..977739) Clostridium botulinum A3 str. Loch Maree 6154440 YP_001786195.1 CDS CLK_0246 NC_010520.1 978062 978874 D identified by match to protein family HMM PF00561; non-heme haloperoxidase 978062..978874 Clostridium botulinum A3 str. Loch Maree 6153543 YP_001786196.1 CDS cadD NC_010520.1 979176 979844 D identified by match to protein family HMM PF03596; cadmium resistance transporter CadD 979176..979844 Clostridium botulinum A3 str. Loch Maree 6151938 YP_001786197.1 CDS CLK_0248 NC_010520.1 979993 980409 D identified by match to protein family HMM PF04463; hypothetical protein 979993..980409 Clostridium botulinum A3 str. Loch Maree 6154360 YP_001786198.1 CDS CLK_0249 NC_010520.1 980536 980673 D identified by Glimmer3; hypothetical protein 980536..980673 Clostridium botulinum A3 str. Loch Maree 6154016 YP_001786199.1 CDS CLK_0250 NC_010520.1 980817 981233 R hypothetical protein complement(980817..981233) Clostridium botulinum A3 str. Loch Maree 6153322 YP_001786200.1 CDS CLK_0251 NC_010520.1 981372 981821 D identified by match to protein family HMM PF01037; match to protein family HMM PF01047; HTH-type transcriptional regulator LrpC 981372..981821 Clostridium botulinum A3 str. Loch Maree 6153271 YP_001786201.1 CDS nimA NC_010520.1 982308 982802 D identified by match to protein family HMM PF01243; nitroimidazole resistance protein NimA 982308..982802 Clostridium botulinum A3 str. Loch Maree 6154124 YP_001786202.1 CDS CLK_0253 NC_010520.1 983152 983640 R flavoredoxin complement(983152..983640) Clostridium botulinum A3 str. Loch Maree 6154720 YP_001786203.1 CDS CLK_0254 NC_010520.1 984061 984396 D hypothetical protein 984061..984396 Clostridium botulinum A3 str. Loch Maree 6152702 YP_001786204.1 CDS CLK_0255 NC_010520.1 985306 985545 D metal-dependent membrane protease 985306..985545 Clostridium botulinum A3 str. Loch Maree 6153688 YP_001786205.1 CDS CLK_0256 NC_010520.1 985605 985724 D identified by Glimmer3; hypothetical protein 985605..985724 Clostridium botulinum A3 str. Loch Maree 6154684 YP_001786206.1 CDS CLK_0257 NC_010520.1 985889 987649 R identified by match to protein family HMM PF01757; O-acetyltransferase OatA complement(985889..987649) Clostridium botulinum A3 str. Loch Maree 6152077 YP_001786207.1 CDS CLK_0258 NC_010520.1 987907 988083 D identified by Glimmer3; hypothetical protein 987907..988083 Clostridium botulinum A3 str. Loch Maree 6152403 YP_001786208.1 CDS CLK_0259 NC_010520.1 988317 988481 R hypothetical protein complement(988317..988481) Clostridium botulinum A3 str. Loch Maree 6152612 YP_001786209.1 CDS CLK_0260 NC_010520.1 988904 989416 D rubrerythrin family protein 988904..989416 Clostridium botulinum A3 str. Loch Maree 6154169 YP_001786210.1 CDS CLK_0261 NC_010520.1 989796 990590 R ABC transporter permease complement(989796..990590) Clostridium botulinum A3 str. Loch Maree 6153889 YP_001786211.1 CDS CLK_0262 NC_010520.1 990609 991526 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(990609..991526) Clostridium botulinum A3 str. Loch Maree 6152838 YP_001786212.1 CDS CLK_0263 NC_010520.1 991498 992643 R identified by match to protein family HMM PF01381; DNA-binding protein complement(991498..992643) Clostridium botulinum A3 str. Loch Maree 6152883 YP_001786213.1 CDS CLK_0264 NC_010520.1 993093 993551 D identified by match to protein family HMM PF00583; acetyltransferase 993093..993551 Clostridium botulinum A3 str. Loch Maree 6151852 YP_001786214.1 CDS CLK_0265 NC_010520.1 993749 994087 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; alkylhydroperoxidase 993749..994087 Clostridium botulinum A3 str. Loch Maree 6153637 YP_001786215.1 CDS CLK_0266 NC_010520.1 994179 994727 D hypothetical protein 994179..994727 Clostridium botulinum A3 str. Loch Maree 6152474 YP_001786216.1 CDS CLK_0267 NC_010520.1 995049 995531 D identified by match to protein family HMM PF00583; N-acetyltransferase GCN5 995049..995531 Clostridium botulinum A3 str. Loch Maree 6154225 YP_001786217.1 CDS CLK_0268 NC_010520.1 996218 996793 D identified by match to protein family HMM PF00583; acetyltransferase 996218..996793 Clostridium botulinum A3 str. Loch Maree 6153347 YP_001786218.1 CDS CLK_0269 NC_010520.1 996890 997543 D identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 996890..997543 Clostridium botulinum A3 str. Loch Maree 6152542 YP_001786219.1 CDS CLK_0270 NC_010520.1 997759 997935 R identified by Glimmer3; hypothetical protein complement(997759..997935) Clostridium botulinum A3 str. Loch Maree 6152613 YP_001786220.1 CDS CLK_0271 NC_010520.1 997953 998780 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(997953..998780) Clostridium botulinum A3 str. Loch Maree 6154548 YP_001786221.1 CDS CLK_0272 NC_010520.1 998892 999509 D identified by match to protein family HMM PF00583; acetyltransferase 998892..999509 Clostridium botulinum A3 str. Loch Maree 6151919 YP_001786222.1 CDS CLK_0273 NC_010520.1 999502 999657 D identified by Glimmer3; hypothetical protein 999502..999657 Clostridium botulinum A3 str. Loch Maree 6153017 YP_001786223.1 CDS CLK_0274 NC_010520.1 999715 1000224 D identified by match to protein family HMM PF04229; hypothetical protein 999715..1000224 Clostridium botulinum A3 str. Loch Maree 6154012 YP_001786224.1 CDS CLK_0275 NC_010520.1 1000274 1000798 D identified by match to protein family HMM PF00583; acetyltransferase 1000274..1000798 Clostridium botulinum A3 str. Loch Maree 6152134 YP_001786225.1 CDS CLK_0276 NC_010520.1 1001098 1001235 D hypothetical protein 1001098..1001235 Clostridium botulinum A3 str. Loch Maree 6153048 YP_001786226.1 CDS CLK_0277 NC_010520.1 1001249 1001950 R identified by match to protein family HMM PF02678; hypothetical protein complement(1001249..1001950) Clostridium botulinum A3 str. Loch Maree 6152526 YP_001786227.1 CDS CLK_0278 NC_010520.1 1002227 1002535 R identified by match to protein family HMM PF01638; transcriptional regulator complement(1002227..1002535) Clostridium botulinum A3 str. Loch Maree 6153235 YP_001786228.1 CDS CLK_0279 NC_010520.1 1002663 1003292 D identified by match to protein family HMM PF00881; nitroreductase 1002663..1003292 Clostridium botulinum A3 str. Loch Maree 6151674 YP_001786229.1 CDS CLK_0280 NC_010520.1 1003656 1005098 D lipase 1003656..1005098 Clostridium botulinum A3 str. Loch Maree 6153019 YP_001786230.1 CDS oxdD NC_010520.1 1005470 1006678 R identified by match to protein family HMM PF00190; match to protein family HMM PF07883; match to protein family HMM TIGR03404; oxalate decarboxylase complement(1005470..1006678) Clostridium botulinum A3 str. Loch Maree 6152484 YP_001786231.1 CDS CLK_0282 NC_010520.1 1006811 1007014 D identified by Glimmer3; hypothetical protein 1006811..1007014 Clostridium botulinum A3 str. Loch Maree 6151729 YP_001786232.1 CDS CLK_0283 NC_010520.1 1007043 1007621 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; decarboxylase complement(1007043..1007621) Clostridium botulinum A3 str. Loch Maree 6153359 YP_001786233.1 CDS CLK_0284 NC_010520.1 1007679 1008134 R identified by match to protein family HMM PF04657; hypothetical protein complement(1007679..1008134) Clostridium botulinum A3 str. Loch Maree 6152509 YP_001786234.1 CDS CLK_0285 NC_010520.1 1008248 1009135 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1008248..1009135 Clostridium botulinum A3 str. Loch Maree 6151738 YP_001786235.1 CDS CLK_0286 NC_010520.1 1009533 1009979 D identified by match to protein family HMM PF00583; acetyltransferase 1009533..1009979 Clostridium botulinum A3 str. Loch Maree 6154428 YP_001786236.1 CDS CLK_0287 NC_010520.1 1010069 1010758 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; match to protein family HMM TIGR02254; HAD family hydrolase complement(1010069..1010758) Clostridium botulinum A3 str. Loch Maree 6152789 YP_001786237.1 CDS CLK_0288 NC_010520.1 1010951 1011418 R hypothetical protein complement(1010951..1011418) Clostridium botulinum A3 str. Loch Maree 6151946 YP_001786238.1 CDS CLK_0289 NC_010520.1 1011423 1011851 R hypothetical protein complement(1011423..1011851) Clostridium botulinum A3 str. Loch Maree 6154842 YP_001786239.1 CDS CLK_0290 NC_010520.1 1011939 1012628 D identified by match to protein family HMM PF00027; hypothetical protein 1011939..1012628 Clostridium botulinum A3 str. Loch Maree 6153424 YP_001786240.1 CDS CLK_0291 NC_010520.1 1012913 1013797 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1012913..1013797) Clostridium botulinum A3 str. Loch Maree 6152404 YP_001786241.1 CDS CLK_0292 NC_010520.1 1013960 1014463 D identified by match to protein family HMM PF00881; nitroreductase 1013960..1014463 Clostridium botulinum A3 str. Loch Maree 6151380 YP_001786242.1 CDS CLK_0293 NC_010520.1 1014521 1015063 D identified by match to protein family HMM PF02525; match to protein family HMM PF03358; multimeric flavodoxin WrbA family protein 1014521..1015063 Clostridium botulinum A3 str. Loch Maree 6154640 YP_001786243.1 CDS CLK_0294 NC_010520.1 1015148 1015399 D identified by Glimmer3; hypothetical protein 1015148..1015399 Clostridium botulinum A3 str. Loch Maree 6153406 YP_001786244.1 CDS CLK_0295 NC_010520.1 1015412 1015549 D identified by Glimmer3; hypothetical protein 1015412..1015549 Clostridium botulinum A3 str. Loch Maree 6153030 YP_001786245.1 CDS CLK_0296 NC_010520.1 1015675 1016007 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 1015675..1016007 Clostridium botulinum A3 str. Loch Maree 6151814 YP_001786246.1 CDS CLK_0297 NC_010520.1 1016253 1016723 R hypothetical protein complement(1016253..1016723) Clostridium botulinum A3 str. Loch Maree 6153276 YP_001786247.1 CDS CLK_0298 NC_010520.1 1016723 1017484 R identified by match to protein family HMM PF06738; hypothetical protein complement(1016723..1017484) Clostridium botulinum A3 str. Loch Maree 6153930 YP_001786248.1 CDS CLK_0299 NC_010520.1 1018079 1018579 R identified by match to protein family HMM PF01327; peptide deformylase complement(1018079..1018579) Clostridium botulinum A3 str. Loch Maree 6151631 YP_001786249.1 CDS CLK_0300 NC_010520.1 1018813 1020249 D identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 1018813..1020249 Clostridium botulinum A3 str. Loch Maree 6154632 YP_001786250.1 CDS CLK_0301 NC_010520.1 1020330 1021457 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1020330..1021457 Clostridium botulinum A3 str. Loch Maree 6152781 YP_001786251.1 CDS CLK_0302 NC_010520.1 1021625 1022143 R identified by match to protein family HMM PF00881; nitroreductase complement(1021625..1022143) Clostridium botulinum A3 str. Loch Maree 6153531 YP_001786252.1 CDS CLK_0303 NC_010520.1 1022386 1023192 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(1022386..1023192) Clostridium botulinum A3 str. Loch Maree 6154419 YP_001786253.1 CDS mraY NC_010520.1 1023546 1024499 R identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1023546..1024499) Clostridium botulinum A3 str. Loch Maree 6151526 YP_001786254.1 CDS CLK_0305 NC_010520.1 1024916 1025776 D identified by match to protein family HMM PF01381; DNA-binding protein 1024916..1025776 Clostridium botulinum A3 str. Loch Maree 6153308 YP_001786255.1 CDS CLK_0306 NC_010520.1 1025996 1026376 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 1025996..1026376 Clostridium botulinum A3 str. Loch Maree 6154037 YP_001786256.1 CDS CLK_0307 NC_010520.1 1026510 1027133 D identified by match to protein family HMM PF08241; methyltransferase 1026510..1027133 Clostridium botulinum A3 str. Loch Maree 6154837 YP_001786257.1 CDS CLK_0308 NC_010520.1 1027400 1027963 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1027400..1027963 Clostridium botulinum A3 str. Loch Maree 6151923 YP_001786258.1 CDS CLK_0309 NC_010520.1 1027986 1029077 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1027986..1029077 Clostridium botulinum A3 str. Loch Maree 6153809 YP_001786259.1 CDS CLK_0310 NC_010520.1 1029564 1030019 R identified by Glimmer3; hypothetical protein complement(1029564..1030019) Clostridium botulinum A3 str. Loch Maree 6154024 YP_001786260.1 CDS CLK_0311 NC_010520.1 1030131 1031303 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(1030131..1031303) Clostridium botulinum A3 str. Loch Maree 6154007 YP_001786261.1 CDS CLK_0312 NC_010520.1 1031495 1031632 D hypothetical protein 1031495..1031632 Clostridium botulinum A3 str. Loch Maree 6154812 YP_001786262.1 CDS CLK_0313 NC_010520.1 1031905 1032603 D identified by match to protein family HMM PF00936; propanediol utilization protein PduB 1031905..1032603 Clostridium botulinum A3 str. Loch Maree 6151400 YP_001786263.1 CDS CLK_0314 NC_010520.1 1032938 1033144 D identified by Glimmer3; hypothetical protein 1032938..1033144 Clostridium botulinum A3 str. Loch Maree 6152687 YP_001786264.1 CDS CLK_0315 NC_010520.1 1033654 1034766 D identified by match to protein family HMM PF02275; match to protein family HMM PF03417; choloylglycine hydrolase 1033654..1034766 Clostridium botulinum A3 str. Loch Maree 6154441 YP_001786265.1 CDS CLK_0316 NC_010520.1 1034839 1035708 D identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator 1034839..1035708 Clostridium botulinum A3 str. Loch Maree 6152894 YP_001786266.1 CDS CLK_0317 NC_010520.1 1035919 1036542 D identified by match to protein family HMM PF06555; hypothetical protein 1035919..1036542 Clostridium botulinum A3 str. Loch Maree 6153988 YP_001786267.1 CDS CLK_0318 NC_010520.1 1037026 1038378 R identified by match to protein family HMM PF01565; match to protein family HMM PF08031; FAD-dependent oxidase complement(1037026..1038378) Clostridium botulinum A3 str. Loch Maree 6154838 YP_001786268.1 CDS CLK_0319 NC_010520.1 1038624 1038776 D hypothetical protein 1038624..1038776 Clostridium botulinum A3 str. Loch Maree 6154824 YP_001786269.1 CDS CLK_0320 NC_010520.1 1038828 1038968 D hypothetical protein 1038828..1038968 Clostridium botulinum A3 str. Loch Maree 6154579 YP_001786270.1 CDS CLK_0321 NC_010520.1 1039153 1040385 R identified by match to protein family HMM PF04371; peptidyl-arginine deiminase complement(1039153..1040385) Clostridium botulinum A3 str. Loch Maree 6154264 YP_001786271.1 CDS CLK_0323 NC_010520.1 1041320 1042183 D identified by match to protein family HMM PF00892; DMT family permease 1041320..1042183 Clostridium botulinum A3 str. Loch Maree 6152653 YP_001786272.1 CDS CLK_0324 NC_010520.1 1042540 1043127 D identified by match to protein family HMM PF04229; hypothetical protein 1042540..1043127 Clostridium botulinum A3 str. Loch Maree 6153502 YP_001786273.1 CDS CLK_0325 NC_010520.1 1043208 1043585 R identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein complement(1043208..1043585) Clostridium botulinum A3 str. Loch Maree 6154545 YP_001786274.1 CDS CLK_0326 NC_010520.1 1043759 1044088 R identified by Glimmer3; hypothetical protein complement(1043759..1044088) Clostridium botulinum A3 str. Loch Maree 6152780 YP_001786275.1 CDS CLK_0327 NC_010520.1 1044183 1044305 D identified by Glimmer3; hypothetical protein 1044183..1044305 Clostridium botulinum A3 str. Loch Maree 6153878 YP_001786276.1 CDS CLK_0328 NC_010520.1 1044352 1044660 R hypothetical protein complement(1044352..1044660) Clostridium botulinum A3 str. Loch Maree 6154927 YP_001786277.1 CDS CLK_0329 NC_010520.1 1044888 1045073 R acetyltransferase complement(1044888..1045073) Clostridium botulinum A3 str. Loch Maree 6153893 YP_001786278.1 CDS CLK_0330 NC_010520.1 1045324 1046157 D hypothetical protein 1045324..1046157 Clostridium botulinum A3 str. Loch Maree 6153126 YP_001786279.1 CDS CLK_0331 NC_010520.1 1046247 1047017 D identified by Glimmer3; hypothetical protein 1046247..1047017 Clostridium botulinum A3 str. Loch Maree 6152755 YP_001786280.1 CDS CLK_0332 NC_010520.1 1047507 1048277 D identified by Glimmer3; hypothetical protein 1047507..1048277 Clostridium botulinum A3 str. Loch Maree 6153755 YP_001786281.1 CDS CLK_0333 NC_010520.1 1048458 1049483 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(1048458..1049483) Clostridium botulinum A3 str. Loch Maree 6154636 YP_001786282.1 CDS CLK_0334 NC_010520.1 1050085 1050969 R identified by match to protein family HMM PF00892; drug/metabolite exporter family protein complement(1050085..1050969) Clostridium botulinum A3 str. Loch Maree 6151756 YP_001786283.1 CDS CLK_0335 NC_010520.1 1051135 1051695 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 1051135..1051695 Clostridium botulinum A3 str. Loch Maree 6152994 YP_001786284.1 CDS CLK_0336 NC_010520.1 1051941 1053548 D hypothetical protein 1051941..1053548 Clostridium botulinum A3 str. Loch Maree 6153824 YP_001786285.1 CDS CLK_0337 NC_010520.1 1053834 1054031 D identified by match to protein family HMM PF01381; HTH DNA-binding protein 1053834..1054031 Clostridium botulinum A3 str. Loch Maree 6151471 YP_001786286.1 CDS CLK_0338 NC_010520.1 1054034 1054447 D hypothetical protein 1054034..1054447 Clostridium botulinum A3 str. Loch Maree 6152279 YP_001786287.1 CDS CLK_0339 NC_010520.1 1054642 1055130 D identified by match to protein family HMM PF00583; acetyltransferase 1054642..1055130 Clostridium botulinum A3 str. Loch Maree 6151559 YP_001786288.1 CDS CLK_0340 NC_010520.1 1055200 1057560 R identified by match to protein family HMM PF00005; match to protein family HMM PF02687; ABC transporter ATP-binding protein/permease complement(1055200..1057560) Clostridium botulinum A3 str. Loch Maree 6152819 YP_001786289.1 CDS CLK_0341 NC_010520.1 1057850 1058521 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1057850..1058521 Clostridium botulinum A3 str. Loch Maree 6151793 YP_001786290.1 CDS CLK_0342 NC_010520.1 1058521 1059549 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1058521..1059549 Clostridium botulinum A3 str. Loch Maree 6154989 YP_001786291.1 CDS CLK_0343 NC_010520.1 1059841 1060449 D identified by match to protein family HMM PF02632; BioY family protein 1059841..1060449 Clostridium botulinum A3 str. Loch Maree 6154138 YP_001786292.1 CDS CLK_0344 NC_010520.1 1060844 1062556 D identified by Glimmer3; hypothetical protein 1060844..1062556 Clostridium botulinum A3 str. Loch Maree 6153317 YP_001786293.1 CDS CLK_0345 NC_010520.1 1062898 1063443 D identified by match to protein family HMM PF00583; acetyltransferase 1062898..1063443 Clostridium botulinum A3 str. Loch Maree 6154468 YP_001786294.1 CDS CLK_0346 NC_010520.1 1063522 1065129 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR00498; LexA repressor 1063522..1065129 Clostridium botulinum A3 str. Loch Maree 6153356 YP_001786295.1 CDS cobU NC_010520.1 1065407 1065964 D catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase 1065407..1065964 Clostridium botulinum A3 str. Loch Maree 6152821 YP_001786296.1 CDS CLK_0348 NC_010520.1 1066053 1066979 D identified by Glimmer3; hypothetical protein 1066053..1066979 Clostridium botulinum A3 str. Loch Maree 6151773 YP_001786297.1 CDS CLK_0349 NC_010520.1 1066988 1067473 D identified by Glimmer3; hypothetical protein 1066988..1067473 Clostridium botulinum A3 str. Loch Maree 6154908 YP_001786298.1 CDS tipA NC_010520.1 1067583 1068347 R identified by match to protein family HMM PF00376; match to protein family HMM PF07739; transcriptional activator TipA complement(1067583..1068347) Clostridium botulinum A3 str. Loch Maree 6153613 YP_001786299.1 CDS cobQ NC_010520.1 1069051 1070532 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1069051..1070532 Clostridium botulinum A3 str. Loch Maree 6154780 YP_001786300.1 CDS cobD NC_010520.1 1070534 1071505 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1070534..1071505 Clostridium botulinum A3 str. Loch Maree 6153666 YP_001786301.1 CDS CLK_0353 NC_010520.1 1071648 1072736 D identified by match to protein family HMM PF00155; aminotransferase 1071648..1072736 Clostridium botulinum A3 str. Loch Maree 6153074 YP_001786302.1 CDS cbiM NC_010520.1 1072920 1073639 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1072920..1073639 Clostridium botulinum A3 str. Loch Maree 6152048 YP_001786303.1 CDS cbiN NC_010520.1 1073643 1073942 D identified by match to protein family HMM PF02553; match to protein family HMM TIGR01165; cobalt transport protein 1073643..1073942 Clostridium botulinum A3 str. Loch Maree 6153129 YP_001786304.1 CDS cbiQ NC_010520.1 1073905 1074606 D identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454; cobalt ABC transporter permease CbiQ 1073905..1074606 Clostridium botulinum A3 str. Loch Maree 6152094 YP_001786305.1 CDS CLK_0357 NC_010520.1 1075022 1075669 D catalyzes the formation of siroheme from precorrin-2; precorrin-2 dehydrogenase 1075022..1075669 Clostridium botulinum A3 str. Loch Maree 6154310 YP_001786306.1 CDS hemC NC_010520.1 1075638 1076510 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1075638..1076510 Clostridium botulinum A3 str. Loch Maree 6153539 YP_001786307.1 CDS CLK_0359 NC_010520.1 1076813 1078273 D cobA/hemD; identified by match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469; uroporphyrinogen III synthase/methyltransferase 1076813..1078273 Clostridium botulinum A3 str. Loch Maree 6152675 YP_001786308.1 CDS hemB NC_010520.1 1078403 1079377 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1078403..1079377 Clostridium botulinum A3 str. Loch Maree 6151856 YP_001786309.1 CDS cobB NC_010520.1 1079470 1080792 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1079470..1080792 Clostridium botulinum A3 str. Loch Maree 6154952 YP_001786310.1 CDS CLK_0362 NC_010520.1 1080950 1081372 D identified by match to protein family HMM PF00903; glyoxalase 1080950..1081372 Clostridium botulinum A3 str. Loch Maree 6152339 YP_001786311.1 CDS cbiC NC_010520.1 1081434 1082060 D catalyzes the interconversion of precorrin-8X and cobyrinic acid; precorrin-8X methylmutase 1081434..1082060 Clostridium botulinum A3 str. Loch Maree 6152861 YP_001786312.1 CDS CLK_0364 NC_010520.1 1082067 1082204 R identified by Glimmer3; hypothetical protein complement(1082067..1082204) Clostridium botulinum A3 str. Loch Maree 6153931 YP_001786313.1 CDS CLK_0365 NC_010520.1 1082226 1082756 D identified by match to protein family HMM PF00583; acetyltransferase 1082226..1082756 Clostridium botulinum A3 str. Loch Maree 6151737 YP_001786314.1 CDS CLK_0366 NC_010520.1 1083035 1083799 D identified by match to protein family HMM PF00753; beta-lactamase domain-containing protein 1083035..1083799 Clostridium botulinum A3 str. Loch Maree 6152772 YP_001786315.1 CDS CLK_0367 NC_010520.1 1084151 1084885 D hypothetical protein 1084151..1084885 Clostridium botulinum A3 str. Loch Maree 6153381 YP_001786316.1 CDS CLK_0368 NC_010520.1 1085051 1085734 D membrane-associated MerR family transcriptional regulator 1085051..1085734 Clostridium botulinum A3 str. Loch Maree 6154339 YP_001786317.1 CDS CLK_0369 NC_010520.1 1085802 1086230 D identified by match to protein family HMM PF00583; acetyltransferase 1085802..1086230 Clostridium botulinum A3 str. Loch Maree 6152190 YP_001786318.1 CDS CLK_0370 NC_010520.1 1086480 1087001 D identified by match to protein family HMM PF00881; nitroreductase 1086480..1087001 Clostridium botulinum A3 str. Loch Maree 6152705 YP_001786319.1 CDS CLK_0371 NC_010520.1 1087218 1087751 D identified by match to protein family HMM PF04229; hypothetical protein 1087218..1087751 Clostridium botulinum A3 str. Loch Maree 6153655 YP_001786320.1 CDS CLK_0372 NC_010520.1 1087853 1088296 D identified by Glimmer3; hypothetical protein 1087853..1088296 Clostridium botulinum A3 str. Loch Maree 6153525 YP_001786321.1 CDS cbiD NC_010520.1 1088309 1089388 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1088309..1089388 Clostridium botulinum A3 str. Loch Maree 6152082 YP_001786322.1 CDS cbiE NC_010520.1 1089564 1090235 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR02467; precorrin-6y C5,15-methyltransferase subunit CbiE 1089564..1090235 Clostridium botulinum A3 str. Loch Maree 6152845 YP_001786323.1 CDS CLK_0375 NC_010520.1 1090446 1090751 D identified by Glimmer3; hypothetical protein 1090446..1090751 Clostridium botulinum A3 str. Loch Maree 6153267 YP_001786324.1 CDS cbiT NC_010520.1 1090897 1091472 D identified by match to protein family HMM TIGR01444; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase subunit CbiT 1090897..1091472 Clostridium botulinum A3 str. Loch Maree 6154992 YP_001786325.1 CDS CLK_0377 NC_010520.1 1091472 1091903 D hypothetical protein 1091472..1091903 Clostridium botulinum A3 str. Loch Maree 6151346 YP_001786326.1 CDS CLK_0378 NC_010520.1 1092099 1092227 R identified by Glimmer3; hypothetical protein complement(1092099..1092227) Clostridium botulinum A3 str. Loch Maree 6152459 YP_001786327.1 CDS CLK_0379 NC_010520.1 1092417 1092608 D identified by Glimmer3; hypothetical protein 1092417..1092608 Clostridium botulinum A3 str. Loch Maree 6152582 YP_001786328.1 CDS CLK_0380 NC_010520.1 1092766 1093218 D hypothetical protein 1092766..1093218 Clostridium botulinum A3 str. Loch Maree 6154140 YP_001786329.1 CDS CLK_0381 NC_010520.1 1093275 1093619 D hypothetical protein 1093275..1093619 Clostridium botulinum A3 str. Loch Maree 6154211 YP_001786330.1 CDS CLK_0382 NC_010520.1 1093687 1094235 D identified by match to protein family HMM PF00583; acetyltransferase 1093687..1094235 Clostridium botulinum A3 str. Loch Maree 6151789 YP_001786331.1 CDS CLK_0383 NC_010520.1 1094285 1094677 D identified by Glimmer3; hypothetical protein 1094285..1094677 Clostridium botulinum A3 str. Loch Maree 6152587 YP_001786332.1 CDS cobI NC_010520.1 1094768 1095484 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1094768..1095484 Clostridium botulinum A3 str. Loch Maree 6153868 YP_001786333.1 CDS cobM NC_010520.1 1095772 1096530 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1095772..1096530 Clostridium botulinum A3 str. Loch Maree 6153845 YP_001786334.1 CDS CLK_0386 NC_010520.1 1096535 1097701 D identified by match to protein family HMM PF01890; hypothetical protein 1096535..1097701 Clostridium botulinum A3 str. Loch Maree 6154648 YP_001786335.1 CDS cobJ NC_010520.1 1097835 1098566 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; precorrin-3B C(17)-methyltransferase 1097835..1098566 Clostridium botulinum A3 str. Loch Maree 6152465 YP_001786336.1 CDS cobK NC_010520.1 1098743 1099510 D CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 1098743..1099510 Clostridium botulinum A3 str. Loch Maree 6152988 YP_001786337.1 CDS CLK_0389 NC_010520.1 1099595 1100083 D hypothetical protein 1099595..1100083 Clostridium botulinum A3 str. Loch Maree 6153259 YP_001786338.1 CDS cbiK NC_010520.1 1100247 1101029 D identified by match to protein family HMM PF01903; match to protein family HMM PF06180; anaerobic sirohydrochlorin cobaltochelatase 1100247..1101029 Clostridium botulinum A3 str. Loch Maree 6152021 YP_001786339.1 CDS CLK_0391 NC_010520.1 1101042 1101872 D identified by match to protein family HMM PF00288; kinase 1101042..1101872 Clostridium botulinum A3 str. Loch Maree 6153948 YP_001786340.1 CDS cobO NC_010520.1 1102077 1102598 D catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1102077..1102598 Clostridium botulinum A3 str. Loch Maree 6154602 YP_001786341.1 CDS CLK_0393 NC_010520.1 1102851 1103540 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator 1102851..1103540 Clostridium botulinum A3 str. Loch Maree 6151907 YP_001786342.1 CDS CLK_0394 NC_010520.1 1103630 1104394 D identified by match to protein family HMM PF01226; formate/nitrite transporter family protein 1103630..1104394 Clostridium botulinum A3 str. Loch Maree 6151569 YP_001786343.1 CDS asrA NC_010520.1 1104414 1105442 D identified by match to protein family HMM PF00037; match to protein family HMM TIGR02910; anaerobic sulfite reductase subunit A 1104414..1105442 Clostridium botulinum A3 str. Loch Maree 6151645 YP_001786344.1 CDS asrB NC_010520.1 1105429 1106226 D with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 1105429..1106226 Clostridium botulinum A3 str. Loch Maree 6153835 YP_001786345.1 CDS arsC NC_010520.1 1106239 1107204 D identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM TIGR02912; anaerobic sulfite reductase subunit C 1106239..1107204 Clostridium botulinum A3 str. Loch Maree 6154624 YP_001786346.1 CDS CLK_0398 NC_010520.1 1107362 1108030 D identified by match to protein family HMM PF00005; macrolide export ATP-binding protein/permease MacB 1107362..1108030 Clostridium botulinum A3 str. Loch Maree 6152187 YP_001786347.1 CDS CLK_0399 NC_010520.1 1108017 1110347 D identified by match to protein family HMM PF02687; ABC transporter permease 1108017..1110347 Clostridium botulinum A3 str. Loch Maree 6152194 YP_001786348.1 CDS CLK_0400 NC_010520.1 1110394 1111080 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; regulatory protein VanR 1110394..1111080 Clostridium botulinum A3 str. Loch Maree 6154001 YP_001786349.1 CDS CLK_0401 NC_010520.1 1111064 1112419 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two component system histidine kinase 1111064..1112419 Clostridium botulinum A3 str. Loch Maree 6151629 YP_001786350.1 CDS CLK_0402 NC_010520.1 1112983 1114005 D identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdopterin binding protein 1112983..1114005 Clostridium botulinum A3 str. Loch Maree 6154258 YP_001786351.1 CDS CLK_0403 NC_010520.1 1114317 1115117 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; anion ABC transporter solute-binding protein 1114317..1115117 Clostridium botulinum A3 str. Loch Maree 6153687 YP_001786352.1 CDS CLK_0404 NC_010520.1 1115137 1115919 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01581; anion ABC transporter permease 1115137..1115919 Clostridium botulinum A3 str. Loch Maree 6154750 YP_001786353.1 CDS CLK_0405 NC_010520.1 1115934 1116632 D identified by match to protein family HMM PF00005; anion ABC transporter ATP-binding protein 1115934..1116632 Clostridium botulinum A3 str. Loch Maree 6151592 YP_001786354.1 CDS CLK_0406 NC_010520.1 1116616 1117344 D hypothetical protein 1116616..1117344 Clostridium botulinum A3 str. Loch Maree 6151838 YP_001786355.1 CDS CLK_0407 NC_010520.1 1117462 1117809 R identified by Glimmer3; hypothetical protein complement(1117462..1117809) Clostridium botulinum A3 str. Loch Maree 6152059 YP_001786356.1 CDS CLK_0408 NC_010520.1 1118134 1119153 D hypothetical protein 1118134..1119153 Clostridium botulinum A3 str. Loch Maree 6154789 YP_001786357.1 CDS CLK_0409 NC_010520.1 1119174 1120061 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1119174..1120061 Clostridium botulinum A3 str. Loch Maree 6152311 YP_001786358.1 CDS CLK_0410 NC_010520.1 1120065 1120841 D hypothetical protein 1120065..1120841 Clostridium botulinum A3 str. Loch Maree 6153519 YP_001786359.1 CDS CLK_0411 NC_010520.1 1121492 1122214 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1121492..1122214 Clostridium botulinum A3 str. Loch Maree 6154933 YP_001786360.1 CDS CLK_0412 NC_010520.1 1122204 1123625 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1122204..1123625 Clostridium botulinum A3 str. Loch Maree 6151812 YP_001786361.1 CDS CLK_0413 NC_010520.1 1123838 1124608 R identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein complement(1123838..1124608) Clostridium botulinum A3 str. Loch Maree 6151427 YP_001786362.1 CDS CLK_0414 NC_010520.1 1124609 1125604 R identified by match to protein family HMM PF00950; match to protein family HMM PF01032; iron ABC transporter permease complement(1124609..1125604) Clostridium botulinum A3 str. Loch Maree 6152453 YP_001786363.1 CDS CLK_0416 NC_010520.1 1125579 1125692 D identified by Glimmer3; hypothetical protein 1125579..1125692 Clostridium botulinum A3 str. Loch Maree 6153454 YP_001786364.1 CDS CLK_0415 NC_010520.1 1125689 1126711 R identified by match to protein family HMM PF01497; iron chelate uptake ABC transporter solute-binding protein complement(1125689..1126711) Clostridium botulinum A3 str. Loch Maree 6152173 YP_001786365.1 CDS CLK_0417 NC_010520.1 1127371 1127511 D hypothetical protein 1127371..1127511 Clostridium botulinum A3 str. Loch Maree 6154483 YP_001786366.1 CDS CLK_0418 NC_010520.1 1127873 1128295 R hypothetical protein complement(1127873..1128295) Clostridium botulinum A3 str. Loch Maree 6152995 YP_001786367.1 CDS CLK_0419 NC_010520.1 1128418 1129350 D identified by match to protein family HMM PF08220; match to protein family HMM PF08279; hypothetical protein 1128418..1129350 Clostridium botulinum A3 str. Loch Maree 6152487 YP_001786368.1 CDS CLK_0420 NC_010520.1 1129590 1130468 R identified by match to protein family HMM PF00126; LysR family transcriptional regulator complement(1129590..1130468) Clostridium botulinum A3 str. Loch Maree 6153711 YP_001786369.1 CDS CLK_0421 NC_010520.1 1130589 1131707 D identified by match to protein family HMM PF00291; threonine synthase 1130589..1131707 Clostridium botulinum A3 str. Loch Maree 6152677 YP_001786370.1 CDS CLK_0422 NC_010520.1 1132017 1132481 D identified by match to protein family HMM PF01243; nitroimidazole resistance protein 1132017..1132481 Clostridium botulinum A3 str. Loch Maree 6151639 YP_001786371.1 CDS dhaKL NC_010520.1 1132892 1134652 R in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase complement(1132892..1134652) Clostridium botulinum A3 str. Loch Maree 6154273 YP_001786372.1 CDS gldA NC_010520.1 1134663 1135793 R forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase complement(1134663..1135793) Clostridium botulinum A3 str. Loch Maree 6152053 YP_001786373.1 CDS CLK_0425 NC_010520.1 1136357 1137394 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1136357..1137394) Clostridium botulinum A3 str. Loch Maree 6153127 YP_001786374.1 CDS CLK_0426 NC_010520.1 1137774 1137947 D hypothetical protein 1137774..1137947 Clostridium botulinum A3 str. Loch Maree 6152160 YP_001786375.1 CDS CLK_0427 NC_010520.1 1137982 1138446 D identified by match to protein family HMM PF00583; acetyltransferase 1137982..1138446 Clostridium botulinum A3 str. Loch Maree 6151516 YP_001786376.1 CDS CLK_0428 NC_010520.1 1138650 1139093 D identified by match to protein family HMM PF00583; acetyltransferase 1138650..1139093 Clostridium botulinum A3 str. Loch Maree 6154805 YP_001786377.1 CDS CLK_0429 NC_010520.1 1139248 1139841 D identified by match to protein family HMM PF07081; hypothetical protein 1139248..1139841 Clostridium botulinum A3 str. Loch Maree 6153803 YP_001786378.1 CDS CLK_0430 NC_010520.1 1140070 1140915 D identified by match to protein family HMM PF00248; aldo/keto reductase 1140070..1140915 Clostridium botulinum A3 str. Loch Maree 6151806 YP_001786379.1 CDS CLK_0431 NC_010520.1 1141016 1141342 D identified by match to protein family HMM PF04993; TfoX domain-containing protein 1141016..1141342 Clostridium botulinum A3 str. Loch Maree 6152824 YP_001786380.1 CDS CLK_0432 NC_010520.1 1141384 1142238 D identified by match to protein family HMM PF00583; acetyltransferase 1141384..1142238 Clostridium botulinum A3 str. Loch Maree 6152437 YP_001786381.1 CDS CLK_0433 NC_010520.1 1142452 1142766 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 1142452..1142766 Clostridium botulinum A3 str. Loch Maree 6153474 YP_001786382.1 CDS CLK_0434 NC_010520.1 1142840 1143397 D hypothetical protein 1142840..1143397 Clostridium botulinum A3 str. Loch Maree 6154909 YP_001786383.1 CDS CLK_0435 NC_010520.1 1143539 1143841 D identified by similarity to GB:AAK81389.1; hypothetical protein 1143539..1143841 Clostridium botulinum A3 str. Loch Maree 6151340 YP_001786384.1 CDS add NC_010520.1 1144281 1145288 R catalyzes the formation of inosine from adenosine; adenosine deaminase complement(1144281..1145288) Clostridium botulinum A3 str. Loch Maree 6153067 YP_001786385.1 CDS CLK_0437 NC_010520.1 1146146 1148314 D identified by match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein 1146146..1148314 Clostridium botulinum A3 str. Loch Maree 6153840 YP_001786386.1 CDS CLK_0438 NC_010520.1 1148522 1150681 D identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein 1148522..1150681 Clostridium botulinum A3 str. Loch Maree 6154492 YP_001786387.1 CDS CLK_0439 NC_010520.1 1151636 1152391 D hypothetical protein 1151636..1152391 Clostridium botulinum A3 str. Loch Maree 6154614 YP_001786388.1 CDS recQ NC_010520.1 1152635 1154764 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 1152635..1154764 Clostridium botulinum A3 str. Loch Maree 6154559 YP_001786389.1 CDS CLK_0441 NC_010520.1 1154875 1155306 D identified by match to protein family HMM PF02915; ferritin 1154875..1155306 Clostridium botulinum A3 str. Loch Maree 6153264 YP_001786390.1 CDS CLK_0442 NC_010520.1 1155549 1156094 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(1155549..1156094) Clostridium botulinum A3 str. Loch Maree 6152352 YP_001786391.1 CDS CLK_0443 NC_010520.1 1156732 1157115 D identified by match to protein family HMM PF00072; response regulator 1156732..1157115 Clostridium botulinum A3 str. Loch Maree 6152986 YP_001786392.1 CDS CLK_0444 NC_010520.1 1157230 1159704 D identified by match to protein family HMM PF07656; match to protein family HMM PF07719; hypothetical protein 1157230..1159704 Clostridium botulinum A3 str. Loch Maree 6154965 YP_001786393.1 CDS lctP NC_010520.1 1160234 1161757 D identified by match to protein family HMM PF02652; match to protein family HMM PF03553; match to protein family HMM TIGR00795; L-lactate permease 1160234..1161757 Clostridium botulinum A3 str. Loch Maree 6153710 YP_001786394.1 CDS CLK_0446 NC_010520.1 1161786 1163060 D hypothetical protein 1161786..1163060 Clostridium botulinum A3 str. Loch Maree 6152625 YP_001786395.1 CDS CLK_0447 NC_010520.1 1163103 1163891 D identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein 1163103..1163891 Clostridium botulinum A3 str. Loch Maree 6151585 YP_001786396.1 CDS CLK_0448 NC_010520.1 1163923 1165125 D identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein 1163923..1165125 Clostridium botulinum A3 str. Loch Maree 6151600 YP_001786397.1 CDS CLK_0449 NC_010520.1 1165186 1166583 D identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase 1165186..1166583 Clostridium botulinum A3 str. Loch Maree 6154730 YP_001786398.1 CDS CLK_0450 NC_010520.1 1166849 1167565 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr DNA-binding domain-containing protein 1166849..1167565 Clostridium botulinum A3 str. Loch Maree 6154405 YP_001786399.1 CDS CLK_0451 NC_010520.1 1167569 1168849 D hypothetical protein 1167569..1168849 Clostridium botulinum A3 str. Loch Maree 6153348 YP_001786400.1 CDS CLK_0452 NC_010520.1 1169030 1169173 D identified by Glimmer3; hypothetical protein 1169030..1169173 Clostridium botulinum A3 str. Loch Maree 6153093 YP_001786401.1 CDS CLK_0453 NC_010520.1 1169173 1169757 D identified by match to protein family HMM PF04647; AIP processing-secretion protein 1169173..1169757 Clostridium botulinum A3 str. Loch Maree 6152052 YP_001786402.1 CDS CLK_0454 NC_010520.1 1169929 1170837 D lipoprotein 1169929..1170837 Clostridium botulinum A3 str. Loch Maree 6152083 YP_001786403.1 CDS CLK_0455 NC_010520.1 1171045 1171506 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1171045..1171506 Clostridium botulinum A3 str. Loch Maree 6154757 YP_001786404.1 CDS CLK_0456 NC_010520.1 1171508 1172053 D identified by match to protein family HMM PF04199; cyclase 1171508..1172053 Clostridium botulinum A3 str. Loch Maree 6153720 YP_001786405.1 CDS CLK_0457 NC_010520.1 1172353 1173537 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1172353..1173537) Clostridium botulinum A3 str. Loch Maree 6151762 YP_001786406.1 CDS CLK_0458 NC_010520.1 1174485 1175063 R identified by match to protein family HMM PF04199; cyclase complement(1174485..1175063) Clostridium botulinum A3 str. Loch Maree 6151527 YP_001786407.1 CDS CLK_0459 NC_010520.1 1175223 1175747 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1175223..1175747 Clostridium botulinum A3 str. Loch Maree 6154364 YP_001786408.1 CDS CLK_0460 NC_010520.1 1176054 1176875 D identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator 1176054..1176875 Clostridium botulinum A3 str. Loch Maree 6153494 YP_001786409.1 CDS CLK_0461 NC_010520.1 1177096 1177794 D identified by match to protein family HMM PF03483; B3/4 domain-containing protein 1177096..1177794 Clostridium botulinum A3 str. Loch Maree 6152842 YP_001786410.1 CDS aspC NC_010520.1 1178101 1179390 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1178101..1179390) Clostridium botulinum A3 str. Loch Maree 6151444 YP_001786411.1 CDS CLK_0463 NC_010520.1 1179935 1180492 D hypothetical protein 1179935..1180492 Clostridium botulinum A3 str. Loch Maree 6154540 YP_001786412.1 CDS CLK_0464 NC_010520.1 1180496 1181059 D identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase 1180496..1181059 Clostridium botulinum A3 str. Loch Maree 6154859 YP_001786413.1 CDS CLK_0465 NC_010520.1 1181333 1181947 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1181333..1181947 Clostridium botulinum A3 str. Loch Maree 6152454 YP_001786414.1 CDS CLK_0466 NC_010520.1 1181963 1182451 D hypothetical protein 1181963..1182451 Clostridium botulinum A3 str. Loch Maree 6152776 YP_001786415.1 CDS CLK_0467 NC_010520.1 1182558 1183247 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; match to protein family HMM TIGR02254; HAD family hydrolase complement(1182558..1183247) Clostridium botulinum A3 str. Loch Maree 6152196 YP_001786416.1 CDS CLK_0468 NC_010520.1 1183560 1184249 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 1183560..1184249 Clostridium botulinum A3 str. Loch Maree 6152326 YP_001786417.1 CDS CLK_0469 NC_010520.1 1184559 1185143 R identified by match to protein family HMM PF01965; DJ-1/PfpI family protein complement(1184559..1185143) Clostridium botulinum A3 str. Loch Maree 6151743 YP_001786418.1 CDS CLK_0470 NC_010520.1 1185299 1186192 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1185299..1186192 Clostridium botulinum A3 str. Loch Maree 6152541 YP_001786419.1 CDS CLK_0471 NC_010520.1 1186326 1187102 D hypothetical protein 1186326..1187102 Clostridium botulinum A3 str. Loch Maree 6151780 YP_001786420.1 CDS CLK_0472 NC_010520.1 1187627 1187836 D identified by match to protein family HMM PF04023; ferrous iron transport protein A 1187627..1187836 Clostridium botulinum A3 str. Loch Maree 6154422 YP_001786421.1 CDS CLK_0473 NC_010520.1 1187853 1188074 D identified by match to protein family HMM PF04023; ferrous iron transport protein A 1187853..1188074 Clostridium botulinum A3 str. Loch Maree 6153190 YP_001786422.1 CDS feoB NC_010520.1 1188106 1190262 D identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 1188106..1190262 Clostridium botulinum A3 str. Loch Maree 6153189 YP_001786423.1 CDS CLK_0475 NC_010520.1 1190283 1190429 D identified by Glimmer3; hypothetical protein 1190283..1190429 Clostridium botulinum A3 str. Loch Maree 6152175 YP_001786424.1 CDS CLK_0476 NC_010520.1 1190645 1191334 D identified by match to protein family HMM PF04239; hypothetical protein 1190645..1191334 Clostridium botulinum A3 str. Loch Maree 6154941 YP_001786425.1 CDS CLK_0477 NC_010520.1 1191488 1191925 R identified by match to protein family HMM PF00583; acetyltransferase complement(1191488..1191925) Clostridium botulinum A3 str. Loch Maree 6153643 YP_001786426.1 CDS CLK_0478 NC_010520.1 1192392 1193192 D identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 1192392..1193192 Clostridium botulinum A3 str. Loch Maree 6153984 YP_001786427.1 CDS tlp NC_010520.1 1193491 1193718 D identified by match to protein family HMM TIGR03090; small acid-soluble spore protein Tlp 1193491..1193718 Clostridium botulinum A3 str. Loch Maree 6154754 YP_001786428.1 CDS CLK_0480 NC_010520.1 1193905 1194528 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1193905..1194528) Clostridium botulinum A3 str. Loch Maree 6153303 YP_001786429.1 CDS CLK_0481 NC_010520.1 1194720 1195910 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family peptidase 1194720..1195910 Clostridium botulinum A3 str. Loch Maree 6154115 YP_001786430.1 CDS CLK_0482 NC_010520.1 1196425 1197111 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1196425..1197111 Clostridium botulinum A3 str. Loch Maree 6153071 YP_001786431.1 CDS CLK_0483 NC_010520.1 1197112 1198467 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1197112..1198467 Clostridium botulinum A3 str. Loch Maree 6153680 YP_001786432.1 CDS CLK_0484 NC_010520.1 1198571 1198705 D identified by Glimmer3; hypothetical protein 1198571..1198705 Clostridium botulinum A3 str. Loch Maree 6154738 YP_001786433.1 CDS CLK_0485 NC_010520.1 1199002 1200261 D identified by match to protein family HMM PF00067; cytochrome P450 1199002..1200261 Clostridium botulinum A3 str. Loch Maree 6151625 YP_001786434.1 CDS CLK_0486 NC_010520.1 1200401 1202209 R identified by match to protein family HMM PF00403; heavy metal-binding domain-containing protein complement(1200401..1202209) Clostridium botulinum A3 str. Loch Maree 6152638 YP_001786435.1 CDS CLK_0487 NC_010520.1 1202747 1202983 D hypothetical protein 1202747..1202983 Clostridium botulinum A3 str. Loch Maree 6153236 YP_001786436.1 CDS CLK_0488 NC_010520.1 1203253 1203954 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1203253..1203954 Clostridium botulinum A3 str. Loch Maree 6152263 YP_001786437.1 CDS CLK_0489 NC_010520.1 1203954 1205360 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1203954..1205360 Clostridium botulinum A3 str. Loch Maree 6153569 YP_001786438.1 CDS CLK_0490 NC_010520.1 1205700 1206386 R hypothetical protein complement(1205700..1206386) Clostridium botulinum A3 str. Loch Maree 6152553 YP_001786439.1 CDS CLK_0491 NC_010520.1 1206622 1207380 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1206622..1207380) Clostridium botulinum A3 str. Loch Maree 6151754 YP_001786440.1 CDS CLK_0492 NC_010520.1 1207626 1208579 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1207626..1208579 Clostridium botulinum A3 str. Loch Maree 6154227 YP_001786441.1 CDS CLK_0493 NC_010520.1 1208569 1209519 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1208569..1209519 Clostridium botulinum A3 str. Loch Maree 6153360 YP_001786442.1 CDS CLK_0494 NC_010520.1 1209516 1210271 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 1209516..1210271 Clostridium botulinum A3 str. Loch Maree 6153684 YP_001786443.1 CDS CLK_0495 NC_010520.1 1210345 1211289 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 1210345..1211289 Clostridium botulinum A3 str. Loch Maree 6153156 YP_001786444.1 CDS CLK_0496 NC_010520.1 1211492 1212493 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1211492..1212493 Clostridium botulinum A3 str. Loch Maree 6151576 YP_001786445.1 CDS CLK_0497 NC_010520.1 1212825 1214627 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1212825..1214627 Clostridium botulinum A3 str. Loch Maree 6154764 YP_001786446.1 CDS CLK_0498 NC_010520.1 1214629 1216350 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 1214629..1216350 Clostridium botulinum A3 str. Loch Maree 6151736 YP_001786447.1 CDS CLK_0499 NC_010520.1 1216551 1217924 R sensor histidine kinase complement(1216551..1217924) Clostridium botulinum A3 str. Loch Maree 6154678 YP_001786448.1 CDS CLK_0500 NC_010520.1 1217927 1218634 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; DNA-binding response regulator complement(1217927..1218634) Clostridium botulinum A3 str. Loch Maree 6154937 YP_001786449.1 CDS CLK_0501 NC_010520.1 1218958 1219809 R hypothetical protein complement(1218958..1219809) Clostridium botulinum A3 str. Loch Maree 6153558 YP_001786450.1 CDS CLK_0502 NC_010520.1 1220171 1221034 D hypothetical protein 1220171..1221034 Clostridium botulinum A3 str. Loch Maree 6152287 YP_001786451.1 CDS CLK_0503 NC_010520.1 1221637 1225011 D identified by match to protein family HMM PF01345; match to protein family HMM TIGR01451; cell surface protein 1221637..1225011 Clostridium botulinum A3 str. Loch Maree 6152794 YP_001786452.1 CDS CLK_0504 NC_010520.1 1225322 1227370 D identified by match to protein family HMM PF03190; thymidylate kinase 1225322..1227370 Clostridium botulinum A3 str. Loch Maree 6151975 YP_001786453.1 CDS CLK_0505 NC_010520.1 1227693 1228688 D identified by match to protein family HMM PF06081; hypothetical protein 1227693..1228688 Clostridium botulinum A3 str. Loch Maree 6154861 YP_001786454.1 CDS CLK_0506 NC_010520.1 1228853 1229437 D hypothetical protein 1228853..1229437 Clostridium botulinum A3 str. Loch Maree 6154023 YP_001786455.1 CDS CLK_0507 NC_010520.1 1229750 1230451 R identified by match to protein family HMM PF02517; CAAX amino terminal protease complement(1229750..1230451) Clostridium botulinum A3 str. Loch Maree 6152346 YP_001786456.1 CDS CLK_0508 NC_010520.1 1230567 1231373 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(1230567..1231373) Clostridium botulinum A3 str. Loch Maree 6151549 YP_001786457.1 CDS CLK_0509 NC_010520.1 1231758 1233677 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(1231758..1233677) Clostridium botulinum A3 str. Loch Maree 6152946 YP_001786458.1 CDS CLK_0510 NC_010520.1 1234316 1235530 D identified by match to protein family HMM PF07670; hypothetical protein 1234316..1235530 Clostridium botulinum A3 str. Loch Maree 6154192 YP_001786459.1 CDS CLK_0511 NC_010520.1 1235904 1236254 D identified by match to protein family HMM PF03960; ArsC family protein 1235904..1236254 Clostridium botulinum A3 str. Loch Maree 6152470 YP_001786460.1 CDS CLK_0512 NC_010520.1 1236472 1237365 D radical SAM domain-containing protein 1236472..1237365 Clostridium botulinum A3 str. Loch Maree 6153263 YP_001786461.1 CDS CLK_0513 NC_010520.1 1237574 1238992 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD-dependent oxidoreductase 1237574..1238992 Clostridium botulinum A3 str. Loch Maree 6154607 YP_001786462.1 CDS CLK_0514 NC_010520.1 1239049 1240305 D identified by match to protein family HMM PF00070; match to protein family HMM PF00890; match to protein family HMM PF03486; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1239049..1240305 Clostridium botulinum A3 str. Loch Maree 6151621 YP_001786463.1 CDS CLK_0515 NC_010520.1 1240308 1240676 D identified by match to protein family HMM PF07892; hypothetical protein 1240308..1240676 Clostridium botulinum A3 str. Loch Maree 6153805 YP_001786464.1 CDS glpT NC_010520.1 1240765 1242102 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00712; match to protein family HMM TIGR00881; glycerol-3-phosphate transporter 1240765..1242102 Clostridium botulinum A3 str. Loch Maree 6154666 YP_001786465.1 CDS argS NC_010520.1 1242722 1244413 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1242722..1244413 Clostridium botulinum A3 str. Loch Maree 6152185 YP_001786466.1 CDS CLK_0518 NC_010520.1 1244817 1245947 D associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 1244817..1245947 Clostridium botulinum A3 str. Loch Maree 6153047 YP_001786467.1 CDS CLK_0519 NC_010520.1 1246244 1246624 D identified by match to protein family HMM PF00571; hypothetical protein 1246244..1246624 Clostridium botulinum A3 str. Loch Maree 6153836 YP_001786468.1 CDS CLK_0520 NC_010520.1 1246845 1247003 R identified by Glimmer3; hypothetical protein complement(1246845..1247003) Clostridium botulinum A3 str. Loch Maree 6152096 YP_001786469.1 CDS feoB NC_010520.1 1247029 1248792 R identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; match to protein family HMM TIGR00650; ferrous iron transport protein B complement(1247029..1248792) Clostridium botulinum A3 str. Loch Maree 6153128 YP_001786470.1 CDS feoA NC_010520.1 1248807 1249028 R identified by match to protein family HMM PF04023; ferrous ion transport protein A complement(1248807..1249028) Clostridium botulinum A3 str. Loch Maree 6153698 YP_001786471.1 CDS CLK_0523 NC_010520.1 1249354 1249749 D identified by match to protein family HMM PF07238; hypothetical protein 1249354..1249749 Clostridium botulinum A3 str. Loch Maree 6154787 YP_001786472.1 CDS CLK_0524 NC_010520.1 1249962 1250687 D identified by match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; haloacid dehalogenase 1249962..1250687 Clostridium botulinum A3 str. Loch Maree 6152559 YP_001786473.1 CDS CLK_0525 NC_010520.1 1251122 1252696 D identified by match to protein family HMM PF02839; glycosyl hydrolase 1251122..1252696 Clostridium botulinum A3 str. Loch Maree 6153578 YP_001786474.1 CDS CLK_0526 NC_010520.1 1253108 1253575 D identified by match to protein family HMM PF00583; acetyltransferase 1253108..1253575 Clostridium botulinum A3 str. Loch Maree 6154283 YP_001786475.1 CDS CLK_0527 NC_010520.1 1253853 1254809 D identified by match to protein family HMM PF00005; methionine ABC transporter ATP-binding protein 1253853..1254809 Clostridium botulinum A3 str. Loch Maree 6151469 YP_001786476.1 CDS CLK_0528 NC_010520.1 1254811 1255452 D identified by match to protein family HMM PF00528; methionine ABC transporter permease 1254811..1255452 Clostridium botulinum A3 str. Loch Maree 6153131 YP_001786477.1 CDS CLK_0529 NC_010520.1 1255508 1256320 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1255508..1256320 Clostridium botulinum A3 str. Loch Maree 6153241 YP_001786478.1 CDS CLK_0530 NC_010520.1 1256508 1257320 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1256508..1257320 Clostridium botulinum A3 str. Loch Maree 6154396 YP_001786479.1 CDS CLK_0531 NC_010520.1 1257549 1258715 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1257549..1258715 Clostridium botulinum A3 str. Loch Maree 6153218 YP_001786480.1 CDS CLK_0532 NC_010520.1 1259287 1259916 D hypothetical protein 1259287..1259916 Clostridium botulinum A3 str. Loch Maree 6153997 YP_001786481.1 CDS CLK_0533 NC_010520.1 1259944 1260267 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1259944..1260267) Clostridium botulinum A3 str. Loch Maree 6152944 YP_001786482.1 CDS CLK_0534 NC_010520.1 1260423 1261115 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1260423..1261115 Clostridium botulinum A3 str. Loch Maree 6151836 YP_001786483.1 CDS CLK_0535 NC_010520.1 1261351 1262214 D identified by match to protein family HMM PF02588; hypothetical protein 1261351..1262214 Clostridium botulinum A3 str. Loch Maree 6154472 YP_001786484.1 CDS CLK_0536 NC_010520.1 1262424 1262636 D hypothetical protein 1262424..1262636 Clostridium botulinum A3 str. Loch Maree 6153483 YP_001786485.1 CDS gltX NC_010520.1 1262854 1264311 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(1262854..1264311) Clostridium botulinum A3 str. Loch Maree 6152467 YP_001786486.1 CDS gap NC_010520.1 1264736 1265752 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 1264736..1265752 Clostridium botulinum A3 str. Loch Maree 6151366 YP_001786487.1 CDS CLK_0539 NC_010520.1 1265978 1267486 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; metallo-beta-lactamase complement(1265978..1267486) Clostridium botulinum A3 str. Loch Maree 6153702 YP_001786488.1 CDS CLK_0540 NC_010520.1 1268055 1268204 D identified by Glimmer3; hypothetical protein 1268055..1268204 Clostridium botulinum A3 str. Loch Maree 6151685 YP_001786489.1 CDS CLK_0541 NC_010520.1 1268347 1268991 D identified by match to protein family HMM PF01966; HD domain-containing protein 1268347..1268991 Clostridium botulinum A3 str. Loch Maree 6154137 YP_001786490.1 CDS CLK_0542 NC_010520.1 1269047 1270417 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1269047..1270417 Clostridium botulinum A3 str. Loch Maree 6153332 YP_001786491.1 CDS CLK_0543 NC_010520.1 1270530 1271927 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1270530..1271927) Clostridium botulinum A3 str. Loch Maree 6152477 YP_001786492.1 CDS CLK_0544 NC_010520.1 1272525 1273901 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1272525..1273901) Clostridium botulinum A3 str. Loch Maree 6151672 YP_001786493.1 CDS CLK_0545 NC_010520.1 1274339 1274776 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1274339..1274776 Clostridium botulinum A3 str. Loch Maree 6153741 YP_001786494.1 CDS CLK_0546 NC_010520.1 1274794 1276161 D identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR00797; MATE efflux family protein 1274794..1276161 Clostridium botulinum A3 str. Loch Maree 6153078 YP_001786495.1 CDS CLK_0547 NC_010520.1 1276583 1277128 D hypothetical protein 1276583..1277128 Clostridium botulinum A3 str. Loch Maree 6152047 YP_001786496.1 CDS CLK_0548 NC_010520.1 1277227 1278204 D hypothetical protein 1277227..1278204 Clostridium botulinum A3 str. Loch Maree 6154249 YP_001786497.1 CDS CLK_0549 NC_010520.1 1279010 1280248 D ABC transporter substrate-binding protein 1279010..1280248 Clostridium botulinum A3 str. Loch Maree 6153180 YP_001786498.1 CDS CLK_0550 NC_010520.1 1280250 1281122 D identified by match to protein family HMM PF00528; ABC transporter permease 1280250..1281122 Clostridium botulinum A3 str. Loch Maree 6153167 YP_001786499.1 CDS CLK_0551 NC_010520.1 1281141 1281947 D identified by match to protein family HMM PF00528; ABC transporter permease 1281141..1281947 Clostridium botulinum A3 str. Loch Maree 6152312 YP_001786500.1 CDS CLK_0552 NC_010520.1 1281959 1282978 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1281959..1282978 Clostridium botulinum A3 str. Loch Maree 6153297 YP_001786501.1 CDS CLK_0553 NC_010520.1 1283281 1284240 D hypothetical protein 1283281..1284240 Clostridium botulinum A3 str. Loch Maree 6153917 YP_001786502.1 CDS CLK_0554 NC_010520.1 1284344 1284895 D identified by match to protein family HMM PF00583; acetyltransferase 1284344..1284895 Clostridium botulinum A3 str. Loch Maree 6154916 YP_001786503.1 CDS CLK_0555 NC_010520.1 1284905 1285240 D hypothetical protein 1284905..1285240 Clostridium botulinum A3 str. Loch Maree 6152863 YP_001786504.1 CDS CLK_0556 NC_010520.1 1285316 1285594 D identified by Glimmer3; hypothetical protein 1285316..1285594 Clostridium botulinum A3 str. Loch Maree 6153627 YP_001786505.1 CDS CLK_0557 NC_010520.1 1285595 1286191 D identified by match to protein family HMM PF03956; hypothetical protein 1285595..1286191 Clostridium botulinum A3 str. Loch Maree 6154826 YP_001786506.1 CDS maa NC_010520.1 1286480 1287034 D identified by match to protein family HMM PF00132; maltose transacetylase 1286480..1287034 Clostridium botulinum A3 str. Loch Maree 6151930 YP_001786507.1 CDS birA NC_010520.1 1287320 1288303 R identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM PF08279; match to protein family HMM TIGR00121; birA bifunctional protein complement(1287320..1288303) Clostridium botulinum A3 str. Loch Maree 6153364 YP_001786508.1 CDS CLK_0560 NC_010520.1 1288467 1288670 D heavy metal-binding protein 1288467..1288670 Clostridium botulinum A3 str. Loch Maree 6154661 YP_001786509.1 CDS CLK_0561 NC_010520.1 1288946 1289383 D identified by match to protein family HMM PF00571; hypothetical protein 1288946..1289383 Clostridium botulinum A3 str. Loch Maree 6154216 YP_001786510.1 CDS CLK_0562 NC_010520.1 1289543 1290976 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1289543..1290976 Clostridium botulinum A3 str. Loch Maree 6153403 YP_001786511.1 CDS CLK_0563 NC_010520.1 1291091 1291216 R hypothetical protein complement(1291091..1291216) Clostridium botulinum A3 str. Loch Maree 6152532 YP_001786512.1 CDS CLK_0564 NC_010520.1 1291844 1292623 D hypothetical protein 1291844..1292623 Clostridium botulinum A3 str. Loch Maree 6151717 YP_001786513.1 CDS mgtE NC_010520.1 1293254 1294588 D identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 1293254..1294588 Clostridium botulinum A3 str. Loch Maree 6151703 YP_001786514.1 CDS CLK_0566 NC_010520.1 1295589 1296662 D identified by match to protein family HMM PF00266; class V aminotransferase 1295589..1296662 Clostridium botulinum A3 str. Loch Maree 6153677 YP_001786515.1 CDS serA NC_010520.1 1296887 1297831 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-3-phosphoglycerate dehydrogenase 1296887..1297831 Clostridium botulinum A3 str. Loch Maree 6152928 YP_001786516.1 CDS CLK_0568 NC_010520.1 1297809 1299137 D identified by match to protein family HMM PF06245; hypothetical protein 1297809..1299137 Clostridium botulinum A3 str. Loch Maree 6152001 YP_001786517.1 CDS CLK_0569 NC_010520.1 1300174 1301364 D identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase/flavodoxin domain-containing protein 1300174..1301364 Clostridium botulinum A3 str. Loch Maree 6152223 YP_001786518.1 CDS CLK_0570 NC_010520.1 1301532 1305821 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase 1301532..1305821 Clostridium botulinum A3 str. Loch Maree 6152830 YP_001786519.1 CDS CLK_0571 NC_010520.1 1305895 1307409 R identified by match to protein family HMM PF02028; match to protein family HMM TIGR00842; choline/carnitine/betaine transporter complement(1305895..1307409) Clostridium botulinum A3 str. Loch Maree 6153407 YP_001786520.1 CDS CLK_0572 NC_010520.1 1307768 1308394 D identified by match to protein family HMM PF00392; match to protein family HMM PF02080; GntR family transcriptional regulator 1307768..1308394 Clostridium botulinum A3 str. Loch Maree 6153748 YP_001786521.1 CDS CLK_0573 NC_010520.1 1308505 1309005 D hypothetical protein 1308505..1309005 Clostridium botulinum A3 str. Loch Maree 6154775 YP_001786522.1 CDS CLK_0574 NC_010520.1 1309304 1309864 D identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase 1309304..1309864 Clostridium botulinum A3 str. Loch Maree 6152111 YP_001786523.1 CDS CLK_0575 NC_010520.1 1310022 1310333 D identified by match to protein family HMM PF00581; phage shock protein 1310022..1310333 Clostridium botulinum A3 str. Loch Maree 6153977 YP_001786524.1 CDS CLK_0576 NC_010520.1 1310409 1310873 D hypothetical protein 1310409..1310873 Clostridium botulinum A3 str. Loch Maree 6154961 YP_001786525.1 CDS CLK_0577 NC_010520.1 1311150 1311350 D hypothetical protein 1311150..1311350 Clostridium botulinum A3 str. Loch Maree 6151483 YP_001786526.1 CDS CLK_0578 NC_010520.1 1311528 1312454 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1311528..1312454 Clostridium botulinum A3 str. Loch Maree 6152521 YP_001786527.1 CDS xpt NC_010520.1 1312615 1313187 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 1312615..1313187 Clostridium botulinum A3 str. Loch Maree 6152534 YP_001786528.1 CDS CLK_0580 NC_010520.1 1313488 1314069 D hypothetical protein 1313488..1314069 Clostridium botulinum A3 str. Loch Maree 6151828 YP_001786529.1 CDS CLK_0581 NC_010520.1 1314379 1315761 D identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 1314379..1315761 Clostridium botulinum A3 str. Loch Maree 6152272 YP_001786530.1 CDS CLK_0582 NC_010520.1 1315957 1316379 D identified by Glimmer3; hypothetical protein 1315957..1316379 Clostridium botulinum A3 str. Loch Maree 6151524 YP_001786531.1 CDS CLK_0583 NC_010520.1 1316723 1317826 D identified by match to protein family HMM PF01594; transporter 1316723..1317826 Clostridium botulinum A3 str. Loch Maree 6154843 YP_001786532.1 CDS CLK_0584 NC_010520.1 1318007 1318336 D identified by match to protein family HMM PF03819; MazG family protein 1318007..1318336 Clostridium botulinum A3 str. Loch Maree 6154067 YP_001786533.1 CDS CLK_0585 NC_010520.1 1318462 1320201 D hypothetical protein 1318462..1320201 Clostridium botulinum A3 str. Loch Maree 6152233 YP_001786534.1 CDS CLK_0586 NC_010520.1 1320481 1320621 D identified by Glimmer3; hypothetical protein 1320481..1320621 Clostridium botulinum A3 str. Loch Maree 6154635 YP_001786535.1 CDS CLK_0587 NC_010520.1 1320803 1322002 D identified by Glimmer3; hypothetical protein 1320803..1322002 Clostridium botulinum A3 str. Loch Maree 6154369 YP_001786536.1 CDS CLK_0588 NC_010520.1 1322382 1323428 D identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 1322382..1323428 Clostridium botulinum A3 str. Loch Maree 6153552 YP_001786537.1 CDS CLK_0589 NC_010520.1 1323430 1325118 D identified by match to protein family HMM PF00528; ABC transporter permease 1323430..1325118 Clostridium botulinum A3 str. Loch Maree 6153003 YP_001786538.1 CDS CLK_0590 NC_010520.1 1325081 1326016 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1325081..1326016 Clostridium botulinum A3 str. Loch Maree 6151604 YP_001786539.1 CDS CLK_0591 NC_010520.1 1326081 1326875 R hypothetical protein complement(1326081..1326875) Clostridium botulinum A3 str. Loch Maree 6152338 YP_001786540.1 CDS CLK_0592 NC_010520.1 1327075 1328502 D hypothetical protein 1327075..1328502 Clostridium botulinum A3 str. Loch Maree 6151477 YP_001786541.1 CDS CLK_0593 NC_010520.1 1328516 1329682 D hypothetical protein 1328516..1329682 Clostridium botulinum A3 str. Loch Maree 6154438 YP_001786542.1 CDS rpsA NC_010520.1 1330081 1331244 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1330081..1331244 Clostridium botulinum A3 str. Loch Maree 6153628 YP_001786543.1 CDS CLK_0595 NC_010520.1 1331427 1331846 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; thioesterase 1331427..1331846 Clostridium botulinum A3 str. Loch Maree 6152751 YP_001786544.1 CDS CLK_0596 NC_010520.1 1332018 1332434 D hypothetical protein 1332018..1332434 Clostridium botulinum A3 str. Loch Maree 6154437 YP_001786545.1 CDS CLK_0597 NC_010520.1 1333303 1334310 D identified by match to protein family HMM PF04392; ABC transporter substrate-binding protein 1333303..1334310 Clostridium botulinum A3 str. Loch Maree 6154829 YP_001786546.1 CDS CLK_0598 NC_010520.1 1334310 1335215 D identified by match to protein family HMM PF02653; ABC transporter permease 1334310..1335215 Clostridium botulinum A3 str. Loch Maree 6154015 YP_001786547.1 CDS CLK_0599 NC_010520.1 1335178 1335972 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1335178..1335972 Clostridium botulinum A3 str. Loch Maree 6153906 YP_001786548.1 CDS CLK_0600 NC_010520.1 1336290 1336592 D identified by Glimmer3; hypothetical protein 1336290..1336592 Clostridium botulinum A3 str. Loch Maree 6153219 YP_001786549.1 CDS asdA NC_010520.1 1337014 1338657 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1337014..1338657 Clostridium botulinum A3 str. Loch Maree 6153020 YP_001786550.1 CDS CLK_0602 NC_010520.1 1338785 1339666 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; match to protein family HMM PF08449; hypothetical protein complement(1338785..1339666) Clostridium botulinum A3 str. Loch Maree 6152791 YP_001786551.1 CDS CLK_0603 NC_010520.1 1340249 1341346 D identified by match to protein family HMM PF00294; match to protein family HMM PF08279; PfkB family kinase 1340249..1341346 Clostridium botulinum A3 str. Loch Maree 6152658 YP_001786552.1 CDS CLK_0604 NC_010520.1 1341340 1342263 D identified by match to protein family HMM PF04227; indigoidine synthase A family protein 1341340..1342263 Clostridium botulinum A3 str. Loch Maree 6151947 YP_001786553.1 CDS panE NC_010520.1 1342757 1343668 D identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 1342757..1343668 Clostridium botulinum A3 str. Loch Maree 6154888 YP_001786554.1 CDS fchA NC_010520.1 1343970 1344602 D identified by match to protein family HMM PF04961; methenyltetrahydrofolate cyclohydrolase 1343970..1344602 Clostridium botulinum A3 str. Loch Maree 6152372 YP_001786555.1 CDS folD NC_010520.1 1344602 1345450 D identified by match to protein family HMM PF00763; match to protein family HMM PF02882; methylenetetrahydrofolate dehydrogenase 1344602..1345450 Clostridium botulinum A3 str. Loch Maree 6151533 YP_001786556.1 CDS CLK_0608 NC_010520.1 1345770 1346564 D identified by match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 1345770..1346564 Clostridium botulinum A3 str. Loch Maree 6154845 YP_001786557.1 CDS CLK_0609 NC_010520.1 1346790 1347296 R identified by match to protein family HMM PF00583; diamine N-acetyltransferase complement(1346790..1347296) Clostridium botulinum A3 str. Loch Maree 6154041 YP_001786558.1 CDS CLK_0610 NC_010520.1 1347489 1347632 D identified by Glimmer3; hypothetical protein 1347489..1347632 Clostridium botulinum A3 str. Loch Maree 6152529 YP_001786559.1 CDS CLK_0611 NC_010520.1 1347747 1348484 D hypothetical protein 1347747..1348484 Clostridium botulinum A3 str. Loch Maree 6151488 YP_001786560.1 CDS CLK_0612 NC_010520.1 1348596 1349405 D identified by match to protein family HMM PF02535; ZIP family zinc transporter 1348596..1349405 Clostridium botulinum A3 str. Loch Maree 6154121 YP_001786561.1 CDS CLK_0613 NC_010520.1 1350077 1350514 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrf2 family protein 1350077..1350514 Clostridium botulinum A3 str. Loch Maree 6153298 YP_001786562.1 CDS cysK NC_010520.1 1350844 1351773 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 1350844..1351773 Clostridium botulinum A3 str. Loch Maree 6152501 YP_001786563.1 CDS CLK_0615 NC_010520.1 1351818 1352486 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1351818..1352486 Clostridium botulinum A3 str. Loch Maree 6151763 YP_001786564.1 CDS CLK_0616 NC_010520.1 1352521 1353345 D identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein 1352521..1353345 Clostridium botulinum A3 str. Loch Maree 6151945 YP_001786565.1 CDS iscS NC_010520.1 1353449 1354579 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfhydrase 1353449..1354579 Clostridium botulinum A3 str. Loch Maree 6154840 YP_001786566.1 CDS CLK_0618 NC_010520.1 1354925 1355725 D identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268; hypothetical protein 1354925..1355725 Clostridium botulinum A3 str. Loch Maree 6154166 YP_001786567.1 CDS CLK_0619 NC_010520.1 1355881 1356009 D identified by Glimmer3; hypothetical protein 1355881..1356009 Clostridium botulinum A3 str. Loch Maree 6153402 YP_001786568.1 CDS mnmA NC_010520.1 1356125 1357195 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1356125..1357195 Clostridium botulinum A3 str. Loch Maree 6153059 YP_001786569.1 CDS CLK_0621 NC_010520.1 1357474 1357719 D identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator 1357474..1357719 Clostridium botulinum A3 str. Loch Maree 6153897 YP_001786570.1 CDS CLK_0622 NC_010520.1 1357779 1358417 D identified by Glimmer3; hypothetical protein 1357779..1358417 Clostridium botulinum A3 str. Loch Maree 6152248 YP_001786571.1 CDS CLK_0623 NC_010520.1 1358387 1358506 D identified by Glimmer3; hypothetical protein 1358387..1358506 Clostridium botulinum A3 str. Loch Maree 6152832 YP_001786572.1 CDS CLK_0624 NC_010520.1 1358698 1359417 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator 1358698..1359417 Clostridium botulinum A3 str. Loch Maree 6153682 YP_001786573.1 CDS CLK_0626 NC_010520.1 1359414 1360766 D identified by match to protein family HMM PF02518; sensor histidine kinase 1359414..1360766 Clostridium botulinum A3 str. Loch Maree 6154460 YP_001786575.1 CDS bcrA NC_010520.1 1361142 1362065 D identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein BcrA 1361142..1362065 Clostridium botulinum A3 str. Loch Maree 6154168 YP_001786576.1 CDS CLK_0628 NC_010520.1 1362058 1362798 D hypothetical protein 1362058..1362798 Clostridium botulinum A3 str. Loch Maree 6152026 YP_001786577.1 CDS CLK_0629 NC_010520.1 1363101 1364987 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1363101..1364987 Clostridium botulinum A3 str. Loch Maree 6153165 YP_001786578.1 CDS CLK_0630 NC_010520.1 1365340 1365507 D hypothetical protein 1365340..1365507 Clostridium botulinum A3 str. Loch Maree 6154825 YP_001786579.1 CDS CLK_0631 NC_010520.1 1365547 1369065 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin oxidoreductase complement(1365547..1369065) Clostridium botulinum A3 str. Loch Maree 6151929 YP_001786580.1 CDS CLK_0632 NC_010520.1 1369339 1369959 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1369339..1369959 Clostridium botulinum A3 str. Loch Maree 6154206 YP_001786581.1 CDS CLK_0633 NC_010520.1 1369965 1371212 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 1369965..1371212 Clostridium botulinum A3 str. Loch Maree 6151772 YP_001786582.1 CDS CLK_0634 NC_010520.1 1371508 1372983 D identified by match to protein family HMM PF02696; hypothetical protein 1371508..1372983 Clostridium botulinum A3 str. Loch Maree 6152636 YP_001786583.1 CDS CLK_0635 NC_010520.1 1373569 1375296 D identified by match to protein family HMM PF01593; amine oxidase 1373569..1375296 Clostridium botulinum A3 str. Loch Maree 6153220 YP_001786584.1 CDS CLK_0636 NC_010520.1 1375541 1376431 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1375541..1376431) Clostridium botulinum A3 str. Loch Maree 6151976 YP_001786585.1 CDS CLK_0637 NC_010520.1 1376631 1378007 D identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792; sugar transporter family protein 1376631..1378007 Clostridium botulinum A3 str. Loch Maree 6152585 YP_001786586.1 CDS CLK_0638 NC_010520.1 1378021 1379349 D identified by match to protein family HMM PF02055; O-glycosyl hydrolase, family protein 1378021..1379349 Clostridium botulinum A3 str. Loch Maree 6153645 YP_001786587.1 CDS CLK_0639 NC_010520.1 1379413 1380354 D identified by match to protein family HMM PF00480; ROK family protein 1379413..1380354 Clostridium botulinum A3 str. Loch Maree 6154883 YP_001786588.1 CDS CLK_0640 NC_010520.1 1380357 1381802 D identified by match to protein family HMM PF00232; glycosyl hydrolase 1380357..1381802 Clostridium botulinum A3 str. Loch Maree 6153088 YP_001786589.1 CDS CLK_0641 NC_010520.1 1381756 1381896 D identified by Glimmer3; hypothetical protein 1381756..1381896 Clostridium botulinum A3 str. Loch Maree 6154120 YP_001786590.1 CDS CLK_0642 NC_010520.1 1381980 1382741 D identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; HTH-type transcriptional regulator YciT 1381980..1382741 Clostridium botulinum A3 str. Loch Maree 6151660 YP_001786591.1 CDS CLK_0643 NC_010520.1 1383026 1383925 R PFL-activatingenzyme; Formate-C-acetyltransferase-activating enzyme; identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; pyruvate formate-lyase-activating enzyme complement(1383026..1383925) Clostridium botulinum A3 str. Loch Maree 6154348 YP_001786592.1 CDS CLK_0644 NC_010520.1 1384131 1386539 D identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01774; pyruvate formate-lyase 1384131..1386539 Clostridium botulinum A3 str. Loch Maree 6153925 YP_001786593.1 CDS CLK_0645 NC_010520.1 1386554 1387231 D identified by match to protein family HMM PF00923; fructose-6-phosphate aldolase 2 1386554..1387231 Clostridium botulinum A3 str. Loch Maree 6152734 YP_001786594.1 CDS amyB NC_010520.1 1387870 1389498 D identified by match to protein family HMM PF00686; match to protein family HMM PF01373; beta-amylase 1387870..1389498 Clostridium botulinum A3 str. Loch Maree 6154146 YP_001786595.1 CDS tyrS NC_010520.1 1390275 1391477 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1390275..1391477 Clostridium botulinum A3 str. Loch Maree 6154903 YP_001786596.1 CDS CLK_0648 NC_010520.1 1391757 1392128 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1391757..1392128 Clostridium botulinum A3 str. Loch Maree 6152663 YP_001786597.1 CDS CLK_0649 NC_010520.1 1392121 1392993 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1392121..1392993 Clostridium botulinum A3 str. Loch Maree 6151656 YP_001786598.1 CDS CLK_0650 NC_010520.1 1392994 1393743 D hypothetical protein 1392994..1393743 Clostridium botulinum A3 str. Loch Maree 6153499 YP_001786599.1 CDS CLK_0651 NC_010520.1 1393879 1394247 R hypothetical protein complement(1393879..1394247) Clostridium botulinum A3 str. Loch Maree 6152514 YP_001786600.1 CDS CLK_0652 NC_010520.1 1394303 1394503 D identified by Glimmer3; hypothetical protein 1394303..1394503 Clostridium botulinum A3 str. Loch Maree 6151489 YP_001786601.1 CDS CLK_0653 NC_010520.1 1394594 1395430 D hypothetical protein 1394594..1395430 Clostridium botulinum A3 str. Loch Maree 6154144 YP_001786602.1 CDS CLK_0654 NC_010520.1 1395616 1398540 D identified by Glimmer3; hypothetical protein 1395616..1398540 Clostridium botulinum A3 str. Loch Maree 6153110 YP_001786603.1 CDS CLK_0655 NC_010520.1 1398618 1400132 D identified by match to protein family HMM PF00704; match to protein family HMM PF01476; match to protein family HMM PF08239; glycosyl hydrolase 1398618..1400132 Clostridium botulinum A3 str. Loch Maree 6152081 YP_001786604.1 CDS CLK_0656 NC_010520.1 1400307 1401566 D identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1400307..1401566 Clostridium botulinum A3 str. Loch Maree 6153023 YP_001786605.1 CDS sdhB NC_010520.1 1401967 1402641 D identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent subunit beta 1401967..1402641 Clostridium botulinum A3 str. Loch Maree 6152163 YP_001786606.1 CDS sdhA NC_010520.1 1402654 1403544 D identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent subunit alpha 1402654..1403544 Clostridium botulinum A3 str. Loch Maree 6154585 YP_001786607.1 CDS CLK_0659 NC_010520.1 1403823 1404242 R hypothetical protein complement(1403823..1404242) Clostridium botulinum A3 str. Loch Maree 6153807 YP_001786608.1 CDS CLK_0660 NC_010520.1 1404471 1404680 D identified by Glimmer3; hypothetical protein 1404471..1404680 Clostridium botulinum A3 str. Loch Maree 6154089 YP_001786609.1 CDS CLK_0661 NC_010520.1 1404839 1404982 R identified by Glimmer3; hypothetical protein complement(1404839..1404982) Clostridium botulinum A3 str. Loch Maree 6151442 YP_001786610.1 CDS CLK_0662 NC_010520.1 1405066 1405185 D identified by Glimmer3; hypothetical protein 1405066..1405185 Clostridium botulinum A3 str. Loch Maree 6152543 YP_001786611.1 CDS CLK_0663 NC_010520.1 1405255 1405839 D hypothetical protein 1405255..1405839 Clostridium botulinum A3 str. Loch Maree 6153350 YP_001786612.1 CDS CLK_0664 NC_010520.1 1405863 1406831 R identified by match to protein family HMM PF01244; dipeptidase complement(1405863..1406831) Clostridium botulinum A3 str. Loch Maree 6154679 YP_001786613.1 CDS CLK_0665 NC_010520.1 1407200 1407727 R hypothetical protein complement(1407200..1407727) Clostridium botulinum A3 str. Loch Maree 6152826 YP_001786614.1 CDS CLK_0666 NC_010520.1 1407836 1408684 R identified by match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(1407836..1408684) Clostridium botulinum A3 str. Loch Maree 6152984 YP_001786615.1 CDS CLK_0667 NC_010520.1 1408690 1409643 R identified by match to protein family HMM PF00528; oligopeptide ABC transporter permease complement(1408690..1409643) Clostridium botulinum A3 str. Loch Maree 6153764 YP_001786616.1 CDS CLK_0668 NC_010520.1 1409831 1411429 R identified by match to protein family HMM PF00496; oligopeptide ABC transporter oligopeptide-binding protein complement(1409831..1411429) Clostridium botulinum A3 str. Loch Maree 6153227 YP_001786617.1 CDS CLK_0669 NC_010520.1 1411719 1411880 D hypothetical protein 1411719..1411880 Clostridium botulinum A3 str. Loch Maree 6152177 YP_001786618.1 CDS cotJB NC_010520.1 1411914 1412186 D spore coat peptide assembly protein CotJB 1411914..1412186 Clostridium botulinum A3 str. Loch Maree 6152597 YP_001786619.1 CDS cotJC NC_010520.1 1412217 1412789 D identified by match to protein family HMM PF05067; spore coat peptide assembly protein CotJC 1412217..1412789 Clostridium botulinum A3 str. Loch Maree 6153602 YP_001786620.1 CDS CLK_0672 NC_010520.1 1412993 1414012 D hypothetical protein 1412993..1414012 Clostridium botulinum A3 str. Loch Maree 6151350 YP_001786621.1 CDS CLK_0673 NC_010520.1 1414029 1415093 D hypothetical protein 1414029..1415093 Clostridium botulinum A3 str. Loch Maree 6152603 YP_001786622.1 CDS CLK_0674 NC_010520.1 1415516 1416007 D identified by match to protein family HMM PF04525; hypothetical protein 1415516..1416007 Clostridium botulinum A3 str. Loch Maree 6154050 YP_001786623.1 CDS CLK_0675 NC_010520.1 1416250 1416642 R identified by Glimmer3; hypothetical protein complement(1416250..1416642) Clostridium botulinum A3 str. Loch Maree 6154248 YP_001786624.1 CDS dut NC_010520.1 1416994 1417620 D identified by match to protein family HMM PF00692; deoxyuridine 5'-triphosphate nucleotidohydrolase 1416994..1417620 Clostridium botulinum A3 str. Loch Maree 6152804 YP_001786625.1 CDS CLK_0677 NC_010520.1 1417677 1417868 R identified by match to protein family HMM TIGR02861; small acid-soluble spore protein, H-type complement(1417677..1417868) Clostridium botulinum A3 str. Loch Maree 6154087 YP_001786626.1 CDS CLK_0678 NC_010520.1 1418384 1419121 R hypothetical protein complement(1418384..1419121) Clostridium botulinum A3 str. Loch Maree 6153601 YP_001786627.1 CDS CLK_0679 NC_010520.1 1419517 1419663 D hypothetical protein 1419517..1419663 Clostridium botulinum A3 str. Loch Maree 6154436 YP_001786628.1 CDS CLK_0680 NC_010520.1 1419780 1420313 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; transcriptional regulator complement(1419780..1420313) Clostridium botulinum A3 str. Loch Maree 6153091 YP_001786629.1 CDS CLK_0681 NC_010520.1 1420736 1421785 D transcriptional regulator 1420736..1421785 Clostridium botulinum A3 str. Loch Maree 6152036 YP_001786630.1 CDS CLK_0682 NC_010520.1 1422455 1422715 D identified by Glimmer3; hypothetical protein 1422455..1422715 Clostridium botulinum A3 str. Loch Maree 6154686 YP_001786631.1 CDS CLK_0683 NC_010520.1 1423084 1423200 D identified by Glimmer3; hypothetical protein 1423084..1423200 Clostridium botulinum A3 str. Loch Maree 6153419 YP_001786632.1 CDS CLK_0684 NC_010520.1 1423668 1425104 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(1423668..1425104) Clostridium botulinum A3 str. Loch Maree 6152647 YP_001786633.1 CDS CLK_0685 NC_010520.1 1425134 1425277 D identified by Glimmer3; hypothetical protein 1425134..1425277 Clostridium botulinum A3 str. Loch Maree 6151358 YP_001786634.1 CDS CLK_0686 NC_010520.1 1426272 1426580 D identified by Glimmer3; hypothetical protein 1426272..1426580 Clostridium botulinum A3 str. Loch Maree 6153396 YP_001786635.1 CDS CLK_0687 NC_010520.1 1427166 1427369 D identified by Glimmer3; hypothetical protein 1427166..1427369 Clostridium botulinum A3 str. Loch Maree 6154077 YP_001786636.1 CDS CLK_0688 NC_010520.1 1427659 1427862 D identified by match to protein family HMM PF01381; DNA-binding protein 1427659..1427862 Clostridium botulinum A3 str. Loch Maree 6152805 YP_001786637.1 CDS CLK_0689 NC_010520.1 1427981 1428127 D identified by Glimmer3; hypothetical protein 1427981..1428127 Clostridium botulinum A3 str. Loch Maree 6151957 YP_001786638.1 CDS CLK_0690 NC_010520.1 1428924 1429181 D hypothetical protein 1428924..1429181 Clostridium botulinum A3 str. Loch Maree 6152100 YP_001786639.1 CDS CLK_0691 NC_010520.1 1429465 1430211 D lipoprotein 1429465..1430211 Clostridium botulinum A3 str. Loch Maree 6154788 YP_001786640.1 CDS CLK_0692 NC_010520.1 1430529 1430756 D identified by match to protein family HMM PF00462; match to protein family HMM TIGR02196; rubredoxin 1430529..1430756 Clostridium botulinum A3 str. Loch Maree 6154675 YP_001786641.1 CDS CLK_0693 NC_010520.1 1430788 1432248 R identified by match to protein family HMM PF00171; glyceraldehyde-3-phosphate dehydrogenase complement(1430788..1432248) Clostridium botulinum A3 str. Loch Maree 6153872 YP_001786642.1 CDS CLK_0694 NC_010520.1 1432288 1433229 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; thioredoxin reductase complement(1432288..1433229) Clostridium botulinum A3 str. Loch Maree 6151608 YP_001786643.1 CDS grdX NC_010520.1 1433990 1434367 D GrdX protein 1433990..1434367 Clostridium botulinum A3 str. Loch Maree 6154496 YP_001786644.1 CDS grdE NC_010520.1 1434458 1435744 D identified by match to protein family HMM PF09338; glycine reductase complex component B, alpha and beta subunits 1434458..1435744 Clostridium botulinum A3 str. Loch Maree 6152318 YP_001786645.1 CDS grdB NC_010520.1 1435777 1437078 D identified by match to protein family HMM PF07355; match to protein family HMM TIGR01918; glycine reductase complex component B, gamma subunit, selenocysteine-containing 1435777..1437078 Clostridium botulinum A3 str. Loch Maree 6152208 YP_001786646.1 CDS trxB NC_010520.1 1437243 1438184 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 1437243..1438184 Clostridium botulinum A3 str. Loch Maree 6154698 YP_001786647.1 CDS CLK_0700 NC_010520.1 1438219 1438539 D identified by match to protein family HMM PF00085; thioredoxin family protein 1438219..1438539 Clostridium botulinum A3 str. Loch Maree 6154623 YP_001786648.1 CDS grdA NC_010520.1 1438624 1438755 D glycine reductase complex component A, selenocysteine-containing 1438624..1438755 Clostridium botulinum A3 str. Loch Maree 6152243 YP_001786649.1 CDS CLK_0702 NC_010520.1 1438777 1439100 D GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin; glycine/sarcosine/betaine reductase complex protein A 1438777..1439100 Clostridium botulinum A3 str. Loch Maree 6152989 YP_001786650.1 CDS grdC NC_010520.1 1439195 1440733 D identified by match to protein family HMM PF08545; glycine reductase complex component C subunit beta 1439195..1440733 Clostridium botulinum A3 str. Loch Maree 6153296 YP_001786651.1 CDS grdD NC_010520.1 1440749 1441915 D identified by match to protein family HMM PF02504; glycine reductase complex component C subunit alpha 1440749..1441915 Clostridium botulinum A3 str. Loch Maree 6154517 YP_001786652.1 CDS CLK_0705 NC_010520.1 1442440 1443051 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1442440..1443051 Clostridium botulinum A3 str. Loch Maree 6151712 YP_001786653.1 CDS CLK_0706 NC_010520.1 1443118 1445361 D identified by match to protein family HMM PF07669; restriction endonuclease 1443118..1445361 Clostridium botulinum A3 str. Loch Maree 6151954 YP_001786654.1 CDS mtnK NC_010520.1 1445791 1447002 D phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1445791..1447002 Clostridium botulinum A3 str. Loch Maree 6154683 YP_001786655.1 CDS mtnA NC_010520.1 1447142 1448191 D isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 1447142..1448191 Clostridium botulinum A3 str. Loch Maree 6154042 YP_001786656.1 CDS CLK_0709 NC_010520.1 1448215 1449705 D identified by match to protein family HMM PF00005; ribose import ATP-binding protein RbsA 1448215..1449705 Clostridium botulinum A3 str. Loch Maree 6154852 YP_001786657.1 CDS CLK_0710 NC_010520.1 1449707 1450702 D identified by match to protein family HMM PF02653; ribose transport system permease RbsC 1449707..1450702 Clostridium botulinum A3 str. Loch Maree 6153274 YP_001786658.1 CDS CLK_0711 NC_010520.1 1450717 1451823 D identified by Glimmer3; hypothetical protein 1450717..1451823 Clostridium botulinum A3 str. Loch Maree 6152669 YP_001786659.1 CDS CLK_0712 NC_010520.1 1451844 1452854 D identified by match to protein family HMM PF00532; D-ribose-binding protein 1451844..1452854 Clostridium botulinum A3 str. Loch Maree 6153632 YP_001786660.1 CDS CLK_0713 NC_010520.1 1452912 1453559 D identified by match to protein family HMM PF00596; aldolase 1452912..1453559 Clostridium botulinum A3 str. Loch Maree 6152376 YP_001786661.1 CDS CLK_0714 NC_010520.1 1453734 1454528 D identified by match to protein family HMM PF00392; match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator 1453734..1454528 Clostridium botulinum A3 str. Loch Maree 6151555 YP_001786662.1 CDS CLK_0715 NC_010520.1 1454837 1455196 D hypothetical protein 1454837..1455196 Clostridium botulinum A3 str. Loch Maree 6153985 YP_001786663.1 CDS CLK_0716 NC_010520.1 1455550 1456425 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(1455550..1456425) Clostridium botulinum A3 str. Loch Maree 6152736 YP_001786664.1 CDS CLK_0717 NC_010520.1 1456673 1457401 D identified by match to protein family HMM PF04239; hypothetical protein 1456673..1457401 Clostridium botulinum A3 str. Loch Maree 6151899 YP_001786665.1 CDS CLK_0718 NC_010520.1 1457564 1457929 D hypothetical protein 1457564..1457929 Clostridium botulinum A3 str. Loch Maree 6154462 YP_001786666.1 CDS CLK_0719 NC_010520.1 1458071 1458409 D hypothetical protein 1458071..1458409 Clostridium botulinum A3 str. Loch Maree 6153464 YP_001786667.1 CDS CLK_0720 NC_010520.1 1458406 1458879 D hypothetical protein 1458406..1458879 Clostridium botulinum A3 str. Loch Maree 6151476 YP_001786668.1 CDS CLK_0721 NC_010520.1 1459569 1459955 D hypothetical protein 1459569..1459955 Clostridium botulinum A3 str. Loch Maree 6152649 YP_001786669.1 CDS CLK_0722 NC_010520.1 1460003 1460710 D hypothetical protein 1460003..1460710 Clostridium botulinum A3 str. Loch Maree 6154991 YP_001786670.1 CDS CLK_0723 NC_010520.1 1460781 1460951 R identified by Glimmer3; hypothetical protein complement(1460781..1460951) Clostridium botulinum A3 str. Loch Maree 6154217 YP_001786671.1 CDS CLK_0724 NC_010520.1 1461312 1461548 R identified by Glimmer3; hypothetical protein complement(1461312..1461548) Clostridium botulinum A3 str. Loch Maree 6154480 YP_001786672.1 CDS CLK_0725 NC_010520.1 1462743 1463039 D hypothetical protein 1462743..1463039 Clostridium botulinum A3 str. Loch Maree 6153431 YP_001786673.1 CDS CLK_0726 NC_010520.1 1463067 1463363 D hypothetical protein 1463067..1463363 Clostridium botulinum A3 str. Loch Maree 6152882 YP_001786674.1 CDS CLK_0727 NC_010520.1 1463420 1465717 D molybdenum cofactor-binding protein; participates in purine salvage; xanthine dehydrogenase subunit XdhA 1463420..1465717 Clostridium botulinum A3 str. Loch Maree 6151859 YP_001786675.1 CDS CLK_0728 NC_010520.1 1465731 1466615 D FAD-binding subunit; with XdhA and XdhC participates in purine salvage; xanthine dehydrogenase subunit XdhB 1465731..1466615 Clostridium botulinum A3 str. Loch Maree 6152123 YP_001786676.1 CDS CLK_0729 NC_010520.1 1466647 1467120 D identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase, iron-sulfur binding subunit 1466647..1467120 Clostridium botulinum A3 str. Loch Maree 6154696 YP_001786677.1 CDS CLK_0730 NC_010520.1 1467236 1467709 D identified by match to protein family HMM PF00383; guanine deaminase 1467236..1467709 Clostridium botulinum A3 str. Loch Maree 6151613 YP_001786678.1 CDS topB NC_010520.1 1468101 1470296 D decatenates replicating daughter chromosomes; DNA topoisomerase III 1468101..1470296 Clostridium botulinum A3 str. Loch Maree 6154233 YP_001786679.1 CDS CLK_0732 NC_010520.1 1470335 1471402 D identified by match to protein family HMM PF04892; match to protein family HMM PF06271; permease 1470335..1471402 Clostridium botulinum A3 str. Loch Maree 6154723 YP_001786680.1 CDS CLK_0733 NC_010520.1 1471681 1472286 D identified by match to protein family HMM PF02659; hypothetical protein 1471681..1472286 Clostridium botulinum A3 str. Loch Maree 6153661 YP_001786681.1 CDS CLK_0734 NC_010520.1 1472350 1472586 D hypothetical protein 1472350..1472586 Clostridium botulinum A3 str. Loch Maree 6151663 YP_001786682.1 CDS CLK_0735 NC_010520.1 1473278 1473931 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 1473278..1473931 Clostridium botulinum A3 str. Loch Maree 6154811 YP_001786683.1 CDS CLK_0736 NC_010520.1 1474328 1475992 D identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; RNA-metabolising metallo-beta-lactamase 1474328..1475992 Clostridium botulinum A3 str. Loch Maree 6152268 YP_001786684.1 CDS CLK_0737 NC_010520.1 1476296 1477648 D identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein 1476296..1477648 Clostridium botulinum A3 str. Loch Maree 6151543 YP_001786685.1 CDS CLK_0738 NC_010520.1 1477970 1478815 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1477970..1478815 Clostridium botulinum A3 str. Loch Maree 6154416 YP_001786686.1 CDS CLK_0739 NC_010520.1 1478808 1480460 D STE-like transcription factor domain-containing protein 1478808..1480460 Clostridium botulinum A3 str. Loch Maree 6153579 YP_001786687.1 CDS CLK_0740 NC_010520.1 1480466 1481728 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 1480466..1481728 Clostridium botulinum A3 str. Loch Maree 6151857 YP_001786688.1 CDS CLK_0741 NC_010520.1 1482021 1484117 D cellulose synthase domain-containing protein 1482021..1484117 Clostridium botulinum A3 str. Loch Maree 6154835 YP_001786689.1 CDS CLK_0742 NC_010520.1 1484531 1485625 D hypothetical protein 1484531..1485625 Clostridium botulinum A3 str. Loch Maree 6152393 YP_001786690.1 CDS CLK_0743 NC_010520.1 1485853 1486017 D hypothetical protein 1485853..1486017 Clostridium botulinum A3 str. Loch Maree 6152301 YP_001786691.1 CDS CLK_0744 NC_010520.1 1486352 1487155 D hypothetical protein 1486352..1487155 Clostridium botulinum A3 str. Loch Maree 6154165 YP_001786692.1 CDS CLK_0745 NC_010520.1 1487372 1487638 D identified by match to protein family HMM PF02583; hypothetical protein 1487372..1487638 Clostridium botulinum A3 str. Loch Maree 6153932 YP_001786693.1 CDS CLK_0746 NC_010520.1 1487675 1490110 D identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 1487675..1490110 Clostridium botulinum A3 str. Loch Maree 6153134 YP_001786694.1 CDS copZ NC_010520.1 1490233 1490451 D identified by match to protein family HMM PF00403; copper chaperone CopZ 1490233..1490451 Clostridium botulinum A3 str. Loch Maree 6152909 YP_001786695.1 CDS CLK_0748 NC_010520.1 1490738 1493119 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase, P-type 1490738..1493119 Clostridium botulinum A3 str. Loch Maree 6151624 YP_001786696.1 CDS CLK_0749 NC_010520.1 1493416 1495134 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1493416..1495134 Clostridium botulinum A3 str. Loch Maree 6154547 YP_001786697.1 CDS CLK_0750 NC_010520.1 1495427 1496221 D identified by match to protein family HMM PF02517; CAAX amino terminal protease 1495427..1496221 Clostridium botulinum A3 str. Loch Maree 6153524 YP_001786698.1 CDS CLK_0751 NC_010520.1 1496385 1496741 D identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein 1496385..1496741 Clostridium botulinum A3 str. Loch Maree 6153619 YP_001786699.1 CDS CLK_0752 NC_010520.1 1497085 1497978 D identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 1497085..1497978 Clostridium botulinum A3 str. Loch Maree 6152330 YP_001786700.1 CDS CLK_0753 NC_010520.1 1498015 1498479 R identified by match to protein family HMM PF01243; 5-nitroimidazole antibiotic resistance protein complement(1498015..1498479) Clostridium botulinum A3 str. Loch Maree 6152062 YP_001786701.1 CDS CLK_0754 NC_010520.1 1498694 1498906 D hypothetical protein 1498694..1498906 Clostridium botulinum A3 str. Loch Maree 6154287 YP_001786702.1 CDS CLK_0755 NC_010520.1 1498948 1499376 D identified by match to protein family HMM PF01230; HIT family protein 1498948..1499376 Clostridium botulinum A3 str. Loch Maree 6153094 YP_001786703.1 CDS CLK_0756 NC_010520.1 1499532 1499906 R hypothetical protein complement(1499532..1499906) Clostridium botulinum A3 str. Loch Maree 6152079 YP_001786704.1 CDS CLK_0757 NC_010520.1 1500196 1500942 D identified by match to protein family HMM PF01478; match to protein family HMM PF06750; type IV leader peptidase 1500196..1500942 Clostridium botulinum A3 str. Loch Maree 6154755 YP_001786705.1 CDS CLK_0758 NC_010520.1 1501557 1502684 D identified by match to protein family HMM PF07907; hypothetical protein 1501557..1502684 Clostridium botulinum A3 str. Loch Maree 6153701 YP_001786706.1 CDS trkA NC_010520.1 1503472 1504839 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1503472..1504839 Clostridium botulinum A3 str. Loch Maree 6151655 YP_001786707.1 CDS trkH NC_010520.1 1504836 1506281 D identified by match to protein family HMM PF02386; Trk system potassium uptake protein TrkH 1504836..1506281 Clostridium botulinum A3 str. Loch Maree 6152639 YP_001786708.1 CDS CLK_0761 NC_010520.1 1506546 1506674 R identified by Glimmer3; hypothetical protein complement(1506546..1506674) Clostridium botulinum A3 str. Loch Maree 6153171 YP_001786709.1 CDS CLK_0762 NC_010520.1 1507064 1507177 R sodium dependent amino acid transporter complement(1507064..1507177) Clostridium botulinum A3 str. Loch Maree 6154232 YP_001786710.1 CDS CLK_0763 NC_010520.1 1507653 1510220 D identified by match to protein family HMM PF00580; match to protein family HMM PF00929; match to protein family HMM TIGR00573; helicase, UvrD/REP/exonuclease 1507653..1510220 Clostridium botulinum A3 str. Loch Maree 6153657 YP_001786711.1 CDS CLK_0764 NC_010520.1 1511508 1512650 D identified by match to protein family HMM PF01976; hypothetical protein 1511508..1512650 Clostridium botulinum A3 str. Loch Maree 6154626 YP_001786712.1 CDS CLK_0765 NC_010520.1 1513093 1514223 R identified by match to protein family HMM PF07853; hypothetical protein complement(1513093..1514223) Clostridium botulinum A3 str. Loch Maree 6151641 YP_001786713.1 CDS CLK_0766 NC_010520.1 1514238 1514612 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(1514238..1514612) Clostridium botulinum A3 str. Loch Maree 6152495 YP_001786714.1 CDS CLK_0767 NC_010520.1 1515121 1515900 R identified by match to protein family HMM PF01476; match to protein family HMM PF07486; cell wall hydrolase complement(1515121..1515900) Clostridium botulinum A3 str. Loch Maree 6154108 YP_001786715.1 CDS rbr NC_010520.1 1516682 1517269 D identified by match to protein family HMM PF02915; rubrerythrin 1516682..1517269 Clostridium botulinum A3 str. Loch Maree 6151633 YP_001786716.1 CDS CLK_0769 NC_010520.1 1517694 1519148 D identified by match to protein family HMM PF04122; amidase 1517694..1519148 Clostridium botulinum A3 str. Loch Maree 6153847 YP_001786717.1 CDS ptsG NC_010520.1 1519328 1521358 R identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830; match to protein family HMM TIGR02002; PTS system glucose-specific transporter subunit IIABC complement(1519328..1521358) Clostridium botulinum A3 str. Loch Maree 6151711 YP_001786718.1 CDS CLK_0771 NC_010520.1 1521815 1522462 D identified by match to protein family HMM PF01255; undecaprenyl pyrophosphate synthetase-like protein 1521815..1522462 Clostridium botulinum A3 str. Loch Maree 6152226 YP_001786719.1 CDS CLK_0772 NC_010520.1 1522607 1522753 D identified by Glimmer3; hypothetical protein 1522607..1522753 Clostridium botulinum A3 str. Loch Maree 6153043 YP_001786720.1 CDS CLK_0773 NC_010520.1 1522850 1523368 D identified by Glimmer3; hypothetical protein 1522850..1523368 Clostridium botulinum A3 str. Loch Maree 6153330 YP_001786721.1 CDS CLK_0774 NC_010520.1 1523650 1524063 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; transcriptional regulator 1523650..1524063 Clostridium botulinum A3 str. Loch Maree 6154129 YP_001786722.1 CDS CLK_0775 NC_010520.1 1524272 1526158 D identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon monoxide dehydrogenase 1524272..1526158 Clostridium botulinum A3 str. Loch Maree 6153377 YP_001786723.1 CDS CLK_0776 NC_010520.1 1526305 1526748 D identified by match to protein family HMM PF00037; nitrate reductase, iron-sulfur subunit 1526305..1526748 Clostridium botulinum A3 str. Loch Maree 6154183 YP_001786724.1 CDS noxA NC_010520.1 1526947 1528173 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; nitrate reductase, NADH oxidase subunit 1526947..1528173 Clostridium botulinum A3 str. Loch Maree 6151735 YP_001786725.1 CDS CLK_0778 NC_010520.1 1528847 1530025 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; transporter complement(1528847..1530025) Clostridium botulinum A3 str. Loch Maree 6152545 YP_001786726.1 CDS CLK_0779 NC_010520.1 1530203 1530889 R identified by match to protein family HMM PF00027; match to protein family HMM PF00325; Crp/FNR family transcriptional regulator complement(1530203..1530889) Clostridium botulinum A3 str. Loch Maree 6151644 YP_001786727.1 CDS CLK_0780 NC_010520.1 1531006 1532205 D identified by match to protein family HMM PF07690; major facilitator superfamily protein 1531006..1532205 Clostridium botulinum A3 str. Loch Maree 6154270 YP_001786728.1 CDS CLK_0781 NC_010520.1 1532507 1533421 D identified by match to protein family HMM PF01497; iron ABC transporter substrate-binding protein 1532507..1533421 Clostridium botulinum A3 str. Loch Maree 6153255 YP_001786729.1 CDS CLK_0782 NC_010520.1 1533443 1534441 D identified by match to protein family HMM PF01032; iron ABC transporter permease 1533443..1534441 Clostridium botulinum A3 str. Loch Maree 6153154 YP_001786730.1 CDS CLK_0783 NC_010520.1 1534444 1535205 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 1534444..1535205 Clostridium botulinum A3 str. Loch Maree 6152071 YP_001786731.1 CDS CLK_0784 NC_010520.1 1535426 1535761 R hypothetical protein complement(1535426..1535761) Clostridium botulinum A3 str. Loch Maree 6154756 YP_001786732.1 CDS CLK_0785 NC_010520.1 1535835 1537112 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(1535835..1537112) Clostridium botulinum A3 str. Loch Maree 6152642 YP_001786733.1 CDS CLK_0786 NC_010520.1 1537512 1538357 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator 1537512..1538357 Clostridium botulinum A3 str. Loch Maree 6151671 YP_001786734.1 CDS murQ NC_010520.1 1538637 1539545 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 1538637..1539545 Clostridium botulinum A3 str. Loch Maree 6154314 YP_001786735.1 CDS CLK_0788 NC_010520.1 1539659 1541014 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system transporter subunit IIBC 1539659..1541014 Clostridium botulinum A3 str. Loch Maree 6153958 YP_001786736.1 CDS CLK_0789 NC_010520.1 1541436 1542521 D identified by match to protein family HMM PF05913; outer surface protein 1541436..1542521 Clostridium botulinum A3 str. Loch Maree 6153417 YP_001786737.1 CDS CLK_0790 NC_010520.1 1542639 1543490 D identified by match to protein family HMM PF06445; AraC family transcriptional regulator 1542639..1543490 Clostridium botulinum A3 str. Loch Maree 6152809 YP_001786738.1 CDS CLK_0791 NC_010520.1 1543514 1543813 D radical SAM protein 1543514..1543813 Clostridium botulinum A3 str. Loch Maree 6152180 YP_001786739.1 CDS CLK_0792 NC_010520.1 1544204 1544809 D identified by match to protein family HMM PF06475; hypothetical protein 1544204..1544809 Clostridium botulinum A3 str. Loch Maree 6154819 YP_001786740.1 CDS CLK_0793 NC_010520.1 1545089 1545730 D identified by match to protein family HMM PF06555; hypothetical protein 1545089..1545730 Clostridium botulinum A3 str. Loch Maree 6154317 YP_001786741.1 CDS CLK_0794 NC_010520.1 1546249 1548120 D hypothetical protein 1546249..1548120 Clostridium botulinum A3 str. Loch Maree 6153277 YP_001786742.1 CDS CLK_0795 NC_010520.1 1548173 1549411 D cell-surface protein 1548173..1549411 Clostridium botulinum A3 str. Loch Maree 6152621 YP_001786743.1 CDS CLK_0796 NC_010520.1 1549411 1549953 D identified by Glimmer3; hypothetical protein 1549411..1549953 Clostridium botulinum A3 str. Loch Maree 6151563 YP_001786744.1 CDS CLK_0797 NC_010520.1 1550124 1550396 R hypothetical protein complement(1550124..1550396) Clostridium botulinum A3 str. Loch Maree 6154828 YP_001786745.1 CDS CLK_0798 NC_010520.1 1550893 1552611 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF06875; methyl-accepting chemotaxis protein 1550893..1552611 Clostridium botulinum A3 str. Loch Maree 6154060 YP_001786746.1 CDS CLK_0799 NC_010520.1 1553071 1554660 D identified by match to protein family HMM PF00496; peptide/opine/nickel uptake ABC transporter substrate-binding protein 1553071..1554660 Clostridium botulinum A3 str. Loch Maree 6153000 YP_001786747.1 CDS CLK_0800 NC_010520.1 1554657 1555613 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1554657..1555613 Clostridium botulinum A3 str. Loch Maree 6153714 YP_001786748.1 CDS CLK_0801 NC_010520.1 1555622 1556422 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1555622..1556422 Clostridium botulinum A3 str. Loch Maree 6153210 YP_001786749.1 CDS CLK_0802 NC_010520.1 1556521 1557315 D identified by match to protein family HMM PF00005; peptide/opine/nickel uptake ABC transporter ATP-binding protein 1556521..1557315 Clostridium botulinum A3 str. Loch Maree 6152064 YP_001786750.1 CDS CLK_0803 NC_010520.1 1557309 1558121 D identified by match to protein family HMM PF00005; peptide/opine/nickel uptake ABC transporter ATP-binding protein 1557309..1558121 Clostridium botulinum A3 str. Loch Maree 6151665 YP_001786751.1 CDS CLK_0804 NC_010520.1 1558567 1559079 D lipoprotein 1558567..1559079 Clostridium botulinum A3 str. Loch Maree 6152536 YP_001786752.1 CDS CLK_0805 NC_010520.1 1559371 1560159 R identified by match to protein family HMM PF00950; manganese/zinc/iron chelate ABC transporter permease complement(1559371..1560159) Clostridium botulinum A3 str. Loch Maree 6153863 YP_001786753.1 CDS CLK_0806 NC_010520.1 1560159 1560812 R identified by match to protein family HMM PF00005; manganese/zinc/iron chelate ABC transporter ATP-binding protein complement(1560159..1560812) Clostridium botulinum A3 str. Loch Maree 6154646 YP_001786754.1 CDS CLK_0807 NC_010520.1 1561033 1561971 D identified by match to protein family HMM PF01297; manganese/zinc/iron chelate ABC transporter substrate-binding protein 1561033..1561971 Clostridium botulinum A3 str. Loch Maree 6153841 YP_001786755.1 CDS CLK_0808 NC_010520.1 1562085 1562576 R hypothetical protein complement(1562085..1562576) Clostridium botulinum A3 str. Loch Maree 6154673 YP_001786756.1 CDS CLK_0809 NC_010520.1 1562990 1564756 D identified by match to protein family HMM PF00271; helicase 1562990..1564756 Clostridium botulinum A3 str. Loch Maree 6153376 YP_001786757.1 CDS CLK_0810 NC_010520.1 1564891 1565439 D identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1564891..1565439 Clostridium botulinum A3 str. Loch Maree 6153940 YP_001786758.1 CDS CLK_0811 NC_010520.1 1566312 1567319 D lipoprotein 1566312..1567319 Clostridium botulinum A3 str. Loch Maree 6151675 YP_001786759.1 CDS CLK_0812 NC_010520.1 1567291 1568052 D identified by match to protein family HMM PF00528; ABC transporter permease 1567291..1568052 Clostridium botulinum A3 str. Loch Maree 6152327 YP_001786760.1 CDS CLK_0813 NC_010520.1 1568193 1568792 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1568193..1568792 Clostridium botulinum A3 str. Loch Maree 6153929 YP_001786761.1 CDS CLK_0814 NC_010520.1 1568877 1569200 D ferric uptake regulatory protein 1568877..1569200 Clostridium botulinum A3 str. Loch Maree 6154946 YP_001786762.1 CDS CLK_0815 NC_010520.1 1569170 1569643 D identified by match to protein family HMM PF02001; hypothetical protein 1569170..1569643 Clostridium botulinum A3 str. Loch Maree 6152701 YP_001786763.1 CDS CLK_0816 NC_010520.1 1569770 1571041 D identified by match to protein family HMM PF00246; match to protein family HMM PF01471; match to protein family HMM PF01476; zinc carboxypeptidase 1569770..1571041 Clostridium botulinum A3 str. Loch Maree 6152777 YP_001786764.1 CDS rnz NC_010520.1 1571328 1572365 D member of metallo-beta-lactamase; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1571328..1572365 Clostridium botulinum A3 str. Loch Maree 6153361 YP_001786765.1 CDS CLK_0818 NC_010520.1 1572824 1574143 D identified by match to protein family HMM PF00324; amino acid permease 1572824..1574143 Clostridium botulinum A3 str. Loch Maree 6154162 YP_001786766.1 CDS CLK_0819 NC_010520.1 1574288 1574665 D identified by match to protein family HMM PF08000; hypothetical protein 1574288..1574665 Clostridium botulinum A3 str. Loch Maree 6154950 YP_001786767.1 CDS CLK_0820 NC_010520.1 1574837 1575994 D identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor histidine kinase 1574837..1575994 Clostridium botulinum A3 str. Loch Maree 6152045 YP_001786768.1 CDS CLK_0821 NC_010520.1 1576280 1576933 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 1576280..1576933 Clostridium botulinum A3 str. Loch Maree 6152833 YP_001786769.1 CDS CLK_0822 NC_010520.1 1577121 1578059 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1577121..1578059 Clostridium botulinum A3 str. Loch Maree 6153587 YP_001786770.1 CDS CLK_0823 NC_010520.1 1578168 1579343 D identified by match to protein family HMM PF01061; ABC transporter permease 1578168..1579343 Clostridium botulinum A3 str. Loch Maree 6154061 YP_001786771.1 CDS CLK_0824 NC_010520.1 1579345 1580442 D identified by match to protein family HMM PF01061; hypothetical protein 1579345..1580442 Clostridium botulinum A3 str. Loch Maree 6153256 YP_001786772.1 CDS CLK_0825 NC_010520.1 1580461 1580679 D identified by Glimmer3; hypothetical protein 1580461..1580679 Clostridium botulinum A3 str. Loch Maree 6152382 YP_001786773.1 CDS CLK_0826 NC_010520.1 1581223 1581774 R identified by match to protein family HMM PF00881; nitroreductase complement(1581223..1581774) Clostridium botulinum A3 str. Loch Maree 6151459 YP_001786774.1 CDS CLK_0827 NC_010520.1 1582332 1582823 R hypothetical protein complement(1582332..1582823) Clostridium botulinum A3 str. Loch Maree 6154770 YP_001786775.1 CDS CLK_0828 NC_010520.1 1582991 1583194 R identified by match to protein family HMM PF00313; major cold shock protein complement(1582991..1583194) Clostridium botulinum A3 str. Loch Maree 6153713 YP_001786776.1 CDS pepD NC_010520.1 1583461 1584924 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase 1583461..1584924 Clostridium botulinum A3 str. Loch Maree 6153575 YP_001786777.1 CDS CLK_0830 NC_010520.1 1584958 1585875 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1584958..1585875 Clostridium botulinum A3 str. Loch Maree 6152716 YP_001786778.1 CDS pdxK NC_010520.1 1586373 1587209 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1586373..1587209 Clostridium botulinum A3 str. Loch Maree 6151414 YP_001786779.1 CDS CLK_0832 NC_010520.1 1587498 1588136 R identified by match to protein family HMM PF01625; methionine-S-sulfoxide reductase complement(1587498..1588136) Clostridium botulinum A3 str. Loch Maree 6152014 YP_001786780.1 CDS CLK_0833 NC_010520.1 1588951 1589715 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1588951..1589715 Clostridium botulinum A3 str. Loch Maree 6154697 YP_001786781.1 CDS CLK_0834 NC_010520.1 1589702 1591591 D identified by match to protein family HMM PF02687; peptide ABC transporter permease 1589702..1591591 Clostridium botulinum A3 str. Loch Maree 6153850 YP_001786782.1 CDS CLK_0835 NC_010520.1 1591764 1592261 D hypothetical protein 1591764..1592261 Clostridium botulinum A3 str. Loch Maree 6152676 YP_001786783.1 CDS CLK_0836 NC_010520.1 1592700 1593401 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1592700..1593401 Clostridium botulinum A3 str. Loch Maree 6151669 YP_001786784.1 CDS CLK_0837 NC_010520.1 1593403 1594380 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1593403..1594380 Clostridium botulinum A3 str. Loch Maree 6152498 YP_001786785.1 CDS CLK_0838 NC_010520.1 1594454 1595209 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1594454..1595209 Clostridium botulinum A3 str. Loch Maree 6151419 YP_001786786.1 CDS CLK_0839 NC_010520.1 1595199 1597007 D peptide ABC transporter permease 1595199..1597007 Clostridium botulinum A3 str. Loch Maree 6152186 YP_001786787.1 CDS CLK_0840 NC_010520.1 1597076 1597798 D hypothetical protein 1597076..1597798 Clostridium botulinum A3 str. Loch Maree 6154571 YP_001786788.1 CDS CLK_0841 NC_010520.1 1598124 1599158 D hypothetical protein 1598124..1599158 Clostridium botulinum A3 str. Loch Maree 6153981 YP_001786789.1 CDS CLK_0842 NC_010520.1 1599560 1600738 D identified by match to protein family HMM PF00155; hemolysin 1599560..1600738 Clostridium botulinum A3 str. Loch Maree 6152413 YP_001786790.1 CDS CLK_0843 NC_010520.1 1600811 1601629 D identified by match to protein family HMM PF00497; amino acid ABC transporter substrate-binding protein 1600811..1601629 Clostridium botulinum A3 str. Loch Maree 6152527 YP_001786791.1 CDS CLK_0844 NC_010520.1 1601642 1602307 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1601642..1602307 Clostridium botulinum A3 str. Loch Maree 6151716 YP_001786792.1 CDS CLK_0845 NC_010520.1 1602326 1603063 D identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein 1602326..1603063 Clostridium botulinum A3 str. Loch Maree 6154149 YP_001786793.1 CDS CLK_0846 NC_010520.1 1603200 1603418 D identified by match to protein family HMM PF01381; DNA-binding protein 1603200..1603418 Clostridium botulinum A3 str. Loch Maree 6153375 YP_001786794.1 CDS CLK_0847 NC_010520.1 1603617 1604885 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(1603617..1604885) Clostridium botulinum A3 str. Loch Maree 6154990 YP_001786795.1 CDS CLK_0848 NC_010520.1 1605184 1605807 D identified by match to protein family HMM PF00293; MutT/NUDIX NTP pyrophosphatase 1605184..1605807 Clostridium botulinum A3 str. Loch Maree 6153861 YP_001786796.1 CDS CLK_0849 NC_010520.1 1605858 1606205 R hypothetical protein complement(1605858..1606205) Clostridium botulinum A3 str. Loch Maree 6154235 YP_001786797.1 CDS CLK_0850 NC_010520.1 1606551 1607714 D identified by match to protein family HMM PF00465; NADH-dependent butanol dehydrogenase 1606551..1607714 Clostridium botulinum A3 str. Loch Maree 6152244 YP_001786798.1 CDS CLK_0851 NC_010520.1 1608098 1608322 D identified by Glimmer3; hypothetical protein 1608098..1608322 Clostridium botulinum A3 str. Loch Maree 6152605 YP_001786799.1 CDS CLK_0852 NC_010520.1 1608495 1610015 D identified by match to protein family HMM PF03600; match to protein family HMM PF03606; match to protein family HMM PF06808; C4-dicarboxylate transporter 1608495..1610015 Clostridium botulinum A3 str. Loch Maree 6153168 YP_001786800.1 CDS CLK_0853 NC_010520.1 1610157 1611638 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(1610157..1611638) Clostridium botulinum A3 str. Loch Maree 6152795 YP_001786801.1 CDS CLK_0854 NC_010520.1 1612092 1612898 D identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein 1612092..1612898 Clostridium botulinum A3 str. Loch Maree 6153442 YP_001786802.1 CDS CLK_0855 NC_010520.1 1612900 1613559 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 1612900..1613559 Clostridium botulinum A3 str. Loch Maree 6154858 YP_001786803.1 CDS CLK_0856 NC_010520.1 1613690 1614238 D hypothetical protein 1613690..1614238 Clostridium botulinum A3 str. Loch Maree 6151991 YP_001786804.1 CDS CLK_0857 NC_010520.1 1614333 1616345 D identified by match to protein family HMM PF00580; ATP-dependent DNA helicase PcrA 1614333..1616345 Clostridium botulinum A3 str. Loch Maree 6152213 YP_001786805.1 CDS CLK_0858 NC_010520.1 1616399 1617361 D identified by match to protein family HMM PF00589; XerC/D integrase-recombinase 1616399..1617361 Clostridium botulinum A3 str. Loch Maree 6153061 YP_001786806.1 CDS CLK_0859 NC_010520.1 1617529 1617831 D identified by Glimmer3; hypothetical protein 1617529..1617831 Clostridium botulinum A3 str. Loch Maree 6154426 YP_001786807.1 CDS CLK_0860 NC_010520.1 1618305 1619483 D identified by match to protein family HMM PF04326; ATPase AAA 1618305..1619483 Clostridium botulinum A3 str. Loch Maree 6153610 YP_001786808.1 CDS CLK_0861 NC_010520.1 1619624 1621045 R identified by match to protein family HMM PF00589; match to protein family HMM PF04313; type I restriction enzyme r protein n terminus (hsdr n) complement(1619624..1621045) Clostridium botulinum A3 str. Loch Maree 6152782 YP_001786809.1 CDS CLK_0862 NC_010520.1 1621168 1621371 R hypothetical protein complement(1621168..1621371) Clostridium botulinum A3 str. Loch Maree 6151962 YP_001786810.1 CDS CLK_0863 NC_010520.1 1621651 1621956 D identified by Glimmer3; hypothetical protein 1621651..1621956 Clostridium botulinum A3 str. Loch Maree 6152286 YP_001786811.1 CDS CLK_0864 NC_010520.1 1621949 1622107 D identified by Glimmer3; hypothetical protein 1621949..1622107 Clostridium botulinum A3 str. Loch Maree 6153358 YP_001786812.1 CDS CLK_0865 NC_010520.1 1622240 1622896 D identified by match to protein family HMM PF01381; DNA-binding protein 1622240..1622896 Clostridium botulinum A3 str. Loch Maree 6152040 YP_001786813.1 CDS CLK_0866 NC_010520.1 1623362 1623520 D identified by Glimmer3; hypothetical protein 1623362..1623520 Clostridium botulinum A3 str. Loch Maree 6153103 YP_001786814.1 CDS CLK_0867 NC_010520.1 1623567 1625072 D identified by Glimmer3; hypothetical protein 1623567..1625072 Clostridium botulinum A3 str. Loch Maree 6151650 YP_001786815.1 CDS CLK_0868 NC_010520.1 1625169 1628546 D hypothetical protein 1625169..1628546 Clostridium botulinum A3 str. Loch Maree 6154268 YP_001786816.1 CDS CLK_0869 NC_010520.1 1628661 1628837 D meprin and traf domain-containing protein 1628661..1628837 Clostridium botulinum A3 str. Loch Maree 6154357 YP_001786817.1 CDS CLK_0870 NC_010520.1 1628862 1631048 D identified by Glimmer3; hypothetical protein 1628862..1631048 Clostridium botulinum A3 str. Loch Maree 6153557 YP_001786818.1 CDS CLK_0871 NC_010520.1 1631351 1632112 D hypothetical protein 1631351..1632112 Clostridium botulinum A3 str. Loch Maree 6153815 YP_001786819.1 CDS CLK_0872 NC_010520.1 1632184 1632882 D identified by Glimmer3; hypothetical protein 1632184..1632882 Clostridium botulinum A3 str. Loch Maree 6152999 YP_001786820.1 CDS CLK_0873 NC_010520.1 1633178 1633693 D identified by similarity to SP:P13299; endonuclease 1633178..1633693 Clostridium botulinum A3 str. Loch Maree 6154902 YP_001786821.1 CDS CLK_0874 NC_010520.1 1633753 1633995 D identified by Glimmer3; hypothetical protein 1633753..1633995 Clostridium botulinum A3 str. Loch Maree 6154094 YP_001786822.1 CDS CLK_0875 NC_010520.1 1634023 1634211 D identified by Glimmer3; hypothetical protein 1634023..1634211 Clostridium botulinum A3 str. Loch Maree 6152291 YP_001786823.1 CDS CLK_0876 NC_010520.1 1634284 1634496 D identified by Glimmer3; hypothetical protein 1634284..1634496 Clostridium botulinum A3 str. Loch Maree 6151618 YP_001786824.1 CDS CLK_0877 NC_010520.1 1634565 1634747 D identified by Glimmer3; hypothetical protein 1634565..1634747 Clostridium botulinum A3 str. Loch Maree 6152712 YP_001786825.1 CDS CLK_0878 NC_010520.1 1634872 1635117 D hypothetical protein 1634872..1635117 Clostridium botulinum A3 str. Loch Maree 6151906 YP_001786826.1 CDS CLK_0879 NC_010520.1 1635237 1635719 D identified by Glimmer3; hypothetical protein 1635237..1635719 Clostridium botulinum A3 str. Loch Maree 6152932 YP_001786827.1 CDS CLK_0880 NC_010520.1 1635768 1636349 D identified by Glimmer3; hypothetical protein 1635768..1636349 Clostridium botulinum A3 str. Loch Maree 6152142 YP_001786828.1 CDS CLK_0881 NC_010520.1 1636583 1637026 D identified by match to protein family HMM PF01844; hypothetical protein 1636583..1637026 Clostridium botulinum A3 str. Loch Maree 6154647 YP_001786829.1 CDS CLK_0882 NC_010520.1 1637172 1637657 D identified by match to protein family HMM PF05119; match to protein family HMM TIGR01558; P27 family phage terminase small subunit 1637172..1637657 Clostridium botulinum A3 str. Loch Maree 6153782 YP_001786830.1 CDS CLK_0883 NC_010520.1 1637654 1639345 D identified by match to protein family HMM PF03354; phage terminase, large subunit 1637654..1639345 Clostridium botulinum A3 str. Loch Maree 6152398 YP_001786831.1 CDS CLK_0884 NC_010520.1 1639369 1639551 D identified by Glimmer3; hypothetical protein 1639369..1639551 Clostridium botulinum A3 str. Loch Maree 6151610 YP_001786832.1 CDS CLK_0885 NC_010520.1 1639595 1640845 D identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537; HK97 family phage portal protein 1639595..1640845 Clostridium botulinum A3 str. Loch Maree 6154078 YP_001786833.1 CDS CLK_0886 NC_010520.1 1641000 1641563 D identified by match to protein family HMM PF00574; prophage LambdaBa02, Clp protease 1641000..1641563 Clostridium botulinum A3 str. Loch Maree 6153283 YP_001786834.1 CDS CLK_0887 NC_010520.1 1641637 1642869 D identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554; HK97 family phage major capsid protein 1641637..1642869 Clostridium botulinum A3 str. Loch Maree 6151980 YP_001786835.1 CDS CLK_0888 NC_010520.1 1642953 1643246 D identified by match to protein family HMM TIGR01560; phi-105 family phage protein 1642953..1643246 Clostridium botulinum A3 str. Loch Maree 6154872 YP_001786836.1 CDS CLK_0889 NC_010520.1 1643236 1643604 D identified by match to protein family HMM TIGR01563; phage head-tail adaptor 1643236..1643604 Clostridium botulinum A3 str. Loch Maree 6153775 YP_001786837.1 CDS CLK_0890 NC_010520.1 1643605 1643964 D identified by match to protein family HMM TIGR01725; HK97 family phage protein 1643605..1643964 Clostridium botulinum A3 str. Loch Maree 6154556 YP_001786838.1 CDS CLK_0891 NC_010520.1 1643980 1644336 D hypothetical protein 1643980..1644336 Clostridium botulinum A3 str. Loch Maree 6152076 YP_001786839.1 CDS CLK_0892 NC_010520.1 1644399 1644980 D identified by match to protein family HMM TIGR01603; phi13 family phage major tail protein 1644399..1644980 Clostridium botulinum A3 str. Loch Maree 6152918 YP_001786840.1 CDS CLK_0893 NC_010520.1 1645038 1645430 D hypothetical protein 1645038..1645430 Clostridium botulinum A3 str. Loch Maree 6152956 YP_001786841.1 CDS CLK_0894 NC_010520.1 1645544 1645663 D identified by Glimmer3; hypothetical protein 1645544..1645663 Clostridium botulinum A3 str. Loch Maree 6153994 YP_001786842.1 CDS CLK_0898 NC_010520.1 1649670 1650539 D hypothetical protein 1649670..1650539 Clostridium botulinum A3 str. Loch Maree 6152385 YP_001786843.1 CDS CLK_0899 NC_010520.1 1650543 1651700 D identified by Glimmer3; hypothetical protein 1650543..1651700 Clostridium botulinum A3 str. Loch Maree 6151916 YP_001786844.1 CDS CLK_0900 NC_010520.1 1651708 1653000 D hypothetical protein 1651708..1653000 Clostridium botulinum A3 str. Loch Maree 6152455 YP_001786845.1 CDS CLK_0901 NC_010520.1 1653011 1653307 D hypothetical protein 1653011..1653307 Clostridium botulinum A3 str. Loch Maree 6153562 YP_001786846.1 CDS CLK_0902 NC_010520.1 1653307 1653468 D hypothetical protein 1653307..1653468 Clostridium botulinum A3 str. Loch Maree 6153290 YP_001786847.1 CDS CLK_0903 NC_010520.1 1653639 1653812 D identified by Glimmer3; hypothetical protein 1653639..1653812 Clostridium botulinum A3 str. Loch Maree 6154299 YP_001786848.1 CDS CLK_0904 NC_010520.1 1653965 1654840 D identified by Glimmer3; hypothetical protein 1653965..1654840 Clostridium botulinum A3 str. Loch Maree 6152960 YP_001786849.1 CDS CLK_0905 NC_010520.1 1654974 1655198 D hypothetical protein 1654974..1655198 Clostridium botulinum A3 str. Loch Maree 6154085 YP_001786850.1 CDS CLK_0906 NC_010520.1 1655200 1655373 D hypothetical protein 1655200..1655373 Clostridium botulinum A3 str. Loch Maree 6153001 YP_001786851.1 CDS CLK_0907 NC_010520.1 1655373 1656131 D identified by match to protein family HMM PF01520; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase 1655373..1656131 Clostridium botulinum A3 str. Loch Maree 6152236 YP_001786852.1 CDS CLK_0908 NC_010520.1 1656260 1656505 D identified by Glimmer3; hypothetical protein 1656260..1656505 Clostridium botulinum A3 str. Loch Maree 6153583 YP_001786853.1 CDS CLK_0909 NC_010520.1 1656603 1657961 D identified by match to protein family HMM PF02366; hypothetical protein 1656603..1657961 Clostridium botulinum A3 str. Loch Maree 6152114 YP_001786854.1 CDS CLK_0910 NC_010520.1 1658470 1658772 D identified by Glimmer3; hypothetical protein 1658470..1658772 Clostridium botulinum A3 str. Loch Maree 6152478 YP_001786855.1 CDS CLK_0911 NC_010520.1 1658975 1661218 D identified by match to protein family HMM PF02491; cell division protein FtsA 1658975..1661218 Clostridium botulinum A3 str. Loch Maree 6153535 YP_001786856.1 CDS CLK_0912 NC_010520.1 1661438 1662616 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 1661438..1662616 Clostridium botulinum A3 str. Loch Maree 6153725 YP_001786857.1 CDS CLK_0913 NC_010520.1 1662672 1663523 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1662672..1663523 Clostridium botulinum A3 str. Loch Maree 6154719 YP_001786858.1 CDS CLK_0914 NC_010520.1 1664003 1664956 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1664003..1664956 Clostridium botulinum A3 str. Loch Maree 6151851 YP_001786859.1 CDS spoVB NC_010520.1 1664988 1666595 D identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; stage V sporulation protein B 1664988..1666595 Clostridium botulinum A3 str. Loch Maree 6152973 YP_001786860.1 CDS CLK_0916 NC_010520.1 1666632 1668137 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR02900; polysaccharide biosynthesis family protein complement(1666632..1668137) Clostridium botulinum A3 str. Loch Maree 6152130 YP_001786861.1 CDS CLK_0917 NC_010520.1 1668470 1669033 D hypothetical protein 1668470..1669033 Clostridium botulinum A3 str. Loch Maree 6152965 YP_001786862.1 CDS CLK_0918 NC_010520.1 1669054 1669461 R hypothetical protein complement(1669054..1669461) Clostridium botulinum A3 str. Loch Maree 6153352 YP_001786863.1 CDS CLK_0919 NC_010520.1 1670570 1671769 D identified by match to protein family HMM PF00465; alcohol dehydrogenase 1670570..1671769 Clostridium botulinum A3 str. Loch Maree 6152386 YP_001786864.1 CDS CLK_0920 NC_010520.1 1672129 1674447 D identified by match to protein family HMM PF05362; ATP-dependent protease 1672129..1674447 Clostridium botulinum A3 str. Loch Maree 6154055 YP_001786865.1 CDS npr NC_010520.1 1675800 1677527 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1675800..1677527) Clostridium botulinum A3 str. Loch Maree 6151405 YP_001786866.1 CDS npr NC_010520.1 1677664 1679442 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1677664..1679442) Clostridium botulinum A3 str. Loch Maree 6153920 YP_001786867.1 CDS npr NC_010520.1 1679558 1681351 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1679558..1681351) Clostridium botulinum A3 str. Loch Maree 6154932 YP_001786868.1 CDS npr NC_010520.1 1681470 1683215 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; thermolysin metallopeptidase complement(1681470..1683215) Clostridium botulinum A3 str. Loch Maree 6154955 YP_001786869.1 CDS CLK_0927 NC_010520.1 1683336 1685078 R identified by match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; bacillolysin complement(1683336..1685078) Clostridium botulinum A3 str. Loch Maree 6152417 YP_001786870.1 CDS nadC NC_010520.1 1685681 1686517 R identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase complement(1685681..1686517) Clostridium botulinum A3 str. Loch Maree 6153261 YP_001786871.1 CDS nadB NC_010520.1 1686498 1687799 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(1686498..1687799) Clostridium botulinum A3 str. Loch Maree 6154804 YP_001786872.1 CDS nadA NC_010520.1 1687802 1688716 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1687802..1688716) Clostridium botulinum A3 str. Loch Maree 6154002 YP_001786873.1 CDS CLK_0931 NC_010520.1 1689086 1690012 D identified by Glimmer3; hypothetical protein 1689086..1690012 Clostridium botulinum A3 str. Loch Maree 6152748 YP_001786874.1 CDS hlyIII NC_010520.1 1690109 1690747 R identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III complement(1690109..1690747) Clostridium botulinum A3 str. Loch Maree 6152820 YP_001786875.1 CDS ychF NC_010520.1 1690868 1691965 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1690868..1691965) Clostridium botulinum A3 str. Loch Maree 6151804 YP_001786876.1 CDS mraZ NC_010520.1 1692657 1693127 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 1692657..1693127 Clostridium botulinum A3 str. Loch Maree 6154945 YP_001786877.1 CDS mraW NC_010520.1 1693207 1694136 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1693207..1694136 Clostridium botulinum A3 str. Loch Maree 6154274 YP_001786878.1 CDS CLK_0936 NC_010520.1 1694218 1694721 D cell division protein FtsL 1694218..1694721 Clostridium botulinum A3 str. Loch Maree 6152678 YP_001786879.1 CDS CLK_0937 NC_010520.1 1694737 1696917 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; match to protein family HMM TIGR02214; stage V sporulation protein D 1694737..1696917 Clostridium botulinum A3 str. Loch Maree 6151501 YP_001786880.1 CDS murE NC_010520.1 1697148 1698599 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1697148..1698599 Clostridium botulinum A3 str. Loch Maree 6154772 YP_001786881.1 CDS murF NC_010520.1 1698625 1700013 D identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1698625..1700013 Clostridium botulinum A3 str. Loch Maree 6153780 YP_001786882.1 CDS mraY NC_010520.1 1700049 1701002 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1700049..1701002 Clostridium botulinum A3 str. Loch Maree 6153199 YP_001786883.1 CDS CLK_0941 NC_010520.1 1701081 1702193 D identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; match to protein family HMM TIGR02615; cell cycle protein FtsW 1701081..1702193 Clostridium botulinum A3 str. Loch Maree 6154478 YP_001786884.1 CDS CLK_0942 NC_010520.1 1702516 1703286 D identified by match to protein family HMM PF08478; cell division protein FtsQ 1702516..1703286 Clostridium botulinum A3 str. Loch Maree 6151855 YP_001786885.1 CDS CLK_0943 NC_010520.1 1703297 1704010 D identified by match to protein family HMM PF05949; hypothetical protein 1703297..1704010 Clostridium botulinum A3 str. Loch Maree 6152913 YP_001786886.1 CDS sbp NC_010520.1 1704044 1704394 D identified by match to protein family HMM PF06947; small basic protein 1704044..1704394 Clostridium botulinum A3 str. Loch Maree 6153913 YP_001786887.1 CDS CLK_0945 NC_010520.1 1704395 1705126 D identified by match to protein family HMM PF05949; hypothetical protein 1704395..1705126 Clostridium botulinum A3 str. Loch Maree 6154911 YP_001786888.1 CDS CLK_0946 NC_010520.1 1705219 1705890 D identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 1705219..1705890 Clostridium botulinum A3 str. Loch Maree 6152664 YP_001786889.1 CDS CLK_0947 NC_010520.1 1705911 1706363 D identified by match to protein family HMM PF04472; hypothetical protein 1705911..1706363 Clostridium botulinum A3 str. Loch Maree 6153571 YP_001786890.1 CDS CLK_0948 NC_010520.1 1706380 1706655 D identified by match to protein family HMM PF02325; hypothetical protein 1706380..1706655 Clostridium botulinum A3 str. Loch Maree 6151874 YP_001786891.1 CDS CLK_0949 NC_010520.1 1706656 1707426 D hypothetical protein 1706656..1707426 Clostridium botulinum A3 str. Loch Maree 6151936 YP_001786892.1 CDS divIVA NC_010520.1 1707442 1708101 D identified by match to protein family HMM PF05103; cell-division initiation protein DivIVA 1707442..1708101 Clostridium botulinum A3 str. Loch Maree 6153418 YP_001786893.1 CDS aroB NC_010520.1 1708507 1709595 D identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1708507..1709595 Clostridium botulinum A3 str. Loch Maree 6152606 YP_001786894.1 CDS mtnN NC_010520.1 1709596 1710288 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1709596..1710288 Clostridium botulinum A3 str. Loch Maree 6152347 YP_001786895.1 CDS aroF NC_010520.1 1710409 1711209 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 1710409..1711209 Clostridium botulinum A3 str. Loch Maree 6151508 YP_001786896.1 CDS aroA NC_010520.1 1711376 1712704 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1711376..1712704 Clostridium botulinum A3 str. Loch Maree 6154834 YP_001786897.1 CDS CLK_0955 NC_010520.1 1712921 1713544 D identified by match to protein family HMM PF01258; match to protein family HMM TIGR02890; RNA polymerase-binding protein DksA 1712921..1713544 Clostridium botulinum A3 str. Loch Maree 6154028 YP_001786898.1 CDS lspA NC_010520.1 1713767 1714210 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1713767..1714210 Clostridium botulinum A3 str. Loch Maree 6154399 YP_001786899.1 CDS CLK_0957 NC_010520.1 1714214 1715131 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1714214..1715131 Clostridium botulinum A3 str. Loch Maree 6153604 YP_001786900.1 CDS pyrR NC_010520.1 1715628 1716164 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1715628..1716164 Clostridium botulinum A3 str. Loch Maree 6152336 YP_001786901.1 CDS CLK_0959 NC_010520.1 1716208 1717551 D identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil permease 1716208..1717551 Clostridium botulinum A3 str. Loch Maree 6151676 YP_001786902.1 CDS CLK_0960 NC_010520.1 1717633 1717746 R small multi-drug export protein complement(1717633..1717746) Clostridium botulinum A3 str. Loch Maree 6152522 YP_001786903.1 CDS xth NC_010520.1 1717855 1718616 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 1717855..1718616 Clostridium botulinum A3 str. Loch Maree 6153344 YP_001786904.1 CDS CLK_0962 NC_010520.1 1718843 1719985 D identified by match to protein family HMM PF01170; methyltransferase 1718843..1719985 Clostridium botulinum A3 str. Loch Maree 6152978 YP_001786905.1 CDS CLK_0963 NC_010520.1 1720343 1720888 D identified by Glimmer3; hypothetical protein 1720343..1720888 Clostridium botulinum A3 str. Loch Maree 6153335 YP_001786906.1 CDS modA NC_010520.1 1721068 1721880 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdate ABC transporter periplasmic molybdate-binding protein 1721068..1721880 Clostridium botulinum A3 str. Loch Maree 6154343 YP_001786907.1 CDS modB NC_010520.1 1721890 1722561 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02141; molybdate ABC transporter permease 1721890..1722561 Clostridium botulinum A3 str. Loch Maree 6151708 YP_001786908.1 CDS CLK_0966 NC_010520.1 1722884 1723555 D identified by match to protein family HMM PF00005; molybdate ABC transporter ATP-binding protein 1722884..1723555 Clostridium botulinum A3 str. Loch Maree 6153742 YP_001786909.1 CDS CLK_0967 NC_010520.1 1723609 1724178 D hypothetical protein 1723609..1724178 Clostridium botulinum A3 str. Loch Maree 6154786 YP_001786910.1 CDS CLK_0968 NC_010520.1 1724530 1725450 D identified by match to protein family HMM PF01734; patatin-like phospholipase 1724530..1725450 Clostridium botulinum A3 str. Loch Maree 6152011 YP_001786911.1 CDS CLK_0969 NC_010520.1 1725851 1726006 D hypothetical protein 1725851..1726006 Clostridium botulinum A3 str. Loch Maree 6151540 YP_001786912.1 CDS CLK_0970 NC_010520.1 1726297 1727349 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1726297..1727349 Clostridium botulinum A3 str. Loch Maree 6153784 YP_001786913.1 CDS CLK_0971 NC_010520.1 1727397 1728794 D identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein 1727397..1728794 Clostridium botulinum A3 str. Loch Maree 6153163 YP_001786914.1 CDS CLK_0972 NC_010520.1 1728936 1730666 D identified by match to protein family HMM PF00111; (Fe-S)-binding protein 1728936..1730666 Clostridium botulinum A3 str. Loch Maree 6153884 YP_001786915.1 CDS CLK_0973 NC_010520.1 1730756 1731685 D identified by match to protein family HMM PF02492; CobW/P47K family protein 1730756..1731685 Clostridium botulinum A3 str. Loch Maree 6153060 YP_001786916.1 CDS CLK_0974 NC_010520.1 1731709 1732581 D methylcobalamin:coenzyme M methyltransferase 1731709..1732581 Clostridium botulinum A3 str. Loch Maree 6151353 YP_001786917.1 CDS mtbC NC_010520.1 1732607 1733269 D identified by match to protein family HMM PF02310; match to protein family HMM PF02607; dimethylamine corrinoid protein 1732607..1733269 Clostridium botulinum A3 str. Loch Maree 6154237 YP_001786918.1 CDS CLK_0976 NC_010520.1 1733349 1734371 D catalyze the formation of methyl-coenzyme M from methylcobalamin and coenzyme M; methylcobalamin:coenzyme M methyltransferase 1733349..1734371 Clostridium botulinum A3 str. Loch Maree 6153458 YP_001786919.1 CDS CLK_0977 NC_010520.1 1735060 1736130 D identified by match to protein family HMM PF01208; methylcobalamin:coenzyme M methyltransferase 1735060..1736130 Clostridium botulinum A3 str. Loch Maree 6152601 YP_001786920.1 CDS CLK_0978 NC_010520.1 1736153 1737115 D identified by match to protein family HMM PF00005; methionine ABC transporter ATP-binding protein 1736153..1737115 Clostridium botulinum A3 str. Loch Maree 6154599 YP_001786921.1 CDS CLK_0979 NC_010520.1 1737084 1737773 D identified by match to protein family HMM PF00528; methionine ABC transporter permease 1737084..1737773 Clostridium botulinum A3 str. Loch Maree 6154573 YP_001786922.1 CDS CLK_0980 NC_010520.1 1737904 1738722 D identified by match to protein family HMM PF03180; NLPA family lipoprotein 1737904..1738722 Clostridium botulinum A3 str. Loch Maree 6151493 YP_001786923.1 CDS CLK_0981 NC_010520.1 1738813 1739382 R identified by match to protein family HMM PF02493; MORN repeat-containing protein complement(1738813..1739382) Clostridium botulinum A3 str. Loch Maree 6152434 YP_001786924.1 CDS CLK_0982 NC_010520.1 1739973 1740992 D identified by match to protein family HMM PF00724; FAD/FMN-binding oxidoreductase 1739973..1740992 Clostridium botulinum A3 str. Loch Maree 6153992 YP_001786925.1 CDS asnA NC_010520.1 1741320 1742342 D catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 1741320..1742342 Clostridium botulinum A3 str. Loch Maree 6151344 YP_001786926.1 CDS CLK_0984 NC_010520.1 1742451 1744016 R identified by match to protein family HMM PF00355; match to protein family HMM PF01266; oxidoreductase, FAD dependent complement(1742451..1744016) Clostridium botulinum A3 str. Loch Maree 6151985 YP_001786927.1 CDS CLK_0985 NC_010520.1 1744376 1746235 D identified by match to protein family HMM PF01131; match to protein family HMM PF01751; DNA topoisomerase 1744376..1746235 Clostridium botulinum A3 str. Loch Maree 6152860 YP_001786928.1 CDS CLK_0986 NC_010520.1 1746262 1748175 D identified by match to protein family HMM PF00488; MutS domain-containing protein 1746262..1748175 Clostridium botulinum A3 str. Loch Maree 6154528 YP_001786929.1 CDS CLK_0987 NC_010520.1 1748492 1749628 D identified by match to protein family HMM PF00037; match to protein family HMM PF00248; aldo/keto reductase 1748492..1749628 Clostridium botulinum A3 str. Loch Maree 6151870 YP_001786930.1 CDS CLK_0988 NC_010520.1 1749686 1750177 R identified by match to protein family HMM PF04073; hypothetical protein complement(1749686..1750177) Clostridium botulinum A3 str. Loch Maree 6152431 YP_001786931.1 CDS CLK_0989 NC_010520.1 1750414 1751112 D identified by match to protein family HMM PF00005; peptide ABC transporter ATP-binding protein 1750414..1751112 Clostridium botulinum A3 str. Loch Maree 6154923 YP_001786932.1 CDS CLK_0990 NC_010520.1 1751113 1753323 D identified by match to protein family HMM PF02687; ABC transporter permease 1751113..1753323 Clostridium botulinum A3 str. Loch Maree 6154338 YP_001786933.1 CDS CLK_0991 NC_010520.1 1753335 1753958 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1753335..1753958 Clostridium botulinum A3 str. Loch Maree 6151430 YP_001786934.1 CDS CLK_0992 NC_010520.1 1754320 1754871 D hypothetical protein 1754320..1754871 Clostridium botulinum A3 str. Loch Maree 6152763 YP_001786935.1 CDS CLK_0993 NC_010520.1 1754884 1755981 D identified by match to protein family HMM PF00005; carbohydrate ABC transporter ATP-binding protein 1754884..1755981 Clostridium botulinum A3 str. Loch Maree 6153560 YP_001786936.1 CDS CLK_0994 NC_010520.1 1755974 1756867 D identified by match to protein family HMM PF00528; carbohydrate ABC transporter permease 1755974..1756867 Clostridium botulinum A3 str. Loch Maree 6154818 YP_001786937.1 CDS CLK_0995 NC_010520.1 1756903 1757727 D identified by match to protein family HMM PF00528; carbohydrate ABC transporter permease 1756903..1757727 Clostridium botulinum A3 str. Loch Maree 6152579 YP_001786938.1 CDS CLK_0996 NC_010520.1 1757773 1759134 D identified by match to protein family HMM PF01547; carbohydrate ABC transporter periplasmic-binding protein 1757773..1759134 Clostridium botulinum A3 str. Loch Maree 6151426 YP_001786939.1 CDS ldh NC_010520.1 1759358 1760314 R identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase complement(1759358..1760314) Clostridium botulinum A3 str. Loch Maree 6154096 YP_001786940.1 CDS CLK_0998 NC_010520.1 1760844 1761554 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 1760844..1761554 Clostridium botulinum A3 str. Loch Maree 6153428 YP_001786941.1 CDS CLK_0999 NC_010520.1 1761807 1762295 R identified by match to protein family HMM TIGR01909; redox family protein complement(1761807..1762295) Clostridium botulinum A3 str. Loch Maree 6153323 YP_001786942.1 CDS CLK_1000 NC_010520.1 1762529 1763476 D identified by match to protein family HMM PF03595; C4-dicarboxylate transporter/malic acid transport protein 1762529..1763476 Clostridium botulinum A3 str. Loch Maree 6152976 YP_001786943.1 CDS CLK_1001 NC_010520.1 1763548 1763709 R identified by Glimmer3; hypothetical protein complement(1763548..1763709) Clostridium botulinum A3 str. Loch Maree 6152170 YP_001786944.1 CDS CLK_1002 NC_010520.1 1764339 1766537 D identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1764339..1766537 Clostridium botulinum A3 str. Loch Maree 6151751 YP_001786945.1 CDS CLK_1003 NC_010520.1 1766645 1766992 D identified by match to protein family HMM PF03860; hypothetical protein 1766645..1766992 Clostridium botulinum A3 str. Loch Maree 6153708 YP_001786946.1 CDS CLK_1004 NC_010520.1 1767358 1769430 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1767358..1769430 Clostridium botulinum A3 str. Loch Maree 6152127 YP_001786947.1 CDS CLK_1005 NC_010520.1 1769700 1769942 D ankyrin repeat-containing protein 1769700..1769942 Clostridium botulinum A3 str. Loch Maree 6154099 YP_001786948.1 CDS CLK_1006 NC_010520.1 1770060 1771559 R identified by match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839; extracellular exochitinase complement(1770060..1771559) Clostridium botulinum A3 str. Loch Maree 6153706 YP_001786949.1 CDS CLK_1007 NC_010520.1 1771564 1771713 R identified by Glimmer3; hypothetical protein complement(1771564..1771713) Clostridium botulinum A3 str. Loch Maree 6152856 YP_001786950.1 CDS CLK_1008 NC_010520.1 1771996 1772538 D hypothetical protein 1771996..1772538 Clostridium botulinum A3 str. Loch Maree 6152577 YP_001786951.1 CDS CLK_1009 NC_010520.1 1772686 1773039 R identified by match to protein family HMM PF01638; transcriptional regulator complement(1772686..1773039) Clostridium botulinum A3 str. Loch Maree 6152792 YP_001786952.1 CDS CLK_1010 NC_010520.1 1773169 1773291 D nitroreductase 1773169..1773291 Clostridium botulinum A3 str. Loch Maree 6154550 YP_001786953.1 CDS CLK_1011 NC_010520.1 1773442 1773807 D identified by match to protein family HMM PF00903; glyoxalase 1773442..1773807 Clostridium botulinum A3 str. Loch Maree 6151456 YP_001786954.1 CDS ogt NC_010520.1 1773836 1774306 D Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated; methylated-DNA--protein-cysteine methyltransferase 1773836..1774306 Clostridium botulinum A3 str. Loch Maree 6151475 YP_001786955.1 CDS CLK_1013 NC_010520.1 1774363 1775550 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1774363..1775550 Clostridium botulinum A3 str. Loch Maree 6152350 YP_001786956.1 CDS CLK_1014 NC_010520.1 1775715 1776923 D identified by match to protein family HMM PF06792; hypothetical protein 1775715..1776923 Clostridium botulinum A3 str. Loch Maree 6154038 YP_001786957.1 CDS CLK_1015 NC_010520.1 1776948 1777778 D hypothetical protein 1776948..1777778 Clostridium botulinum A3 str. Loch Maree 6154898 YP_001786958.1 CDS CLK_1016 NC_010520.1 1777823 1778236 D identified by match to protein family HMM PF07883; cupin 1777823..1778236 Clostridium botulinum A3 str. Loch Maree 6151984 YP_001786959.1 CDS CLK_1017 NC_010520.1 1778633 1779745 D identified by match to protein family HMM PF01381; DNA-binding protein 1778633..1779745 Clostridium botulinum A3 str. Loch Maree 6153111 YP_001786960.1 CDS CLK_1018 NC_010520.1 1780126 1782660 D identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; hypothetical protein 1780126..1782660 Clostridium botulinum A3 str. Loch Maree 6154027 YP_001786961.1 CDS CLK_1019 NC_010520.1 1782717 1783586 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1782717..1783586 Clostridium botulinum A3 str. Loch Maree 6152727 YP_001786962.1 CDS CLK_1020 NC_010520.1 1783875 1785278 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 1783875..1785278 Clostridium botulinum A3 str. Loch Maree 6154593 YP_001786963.1 CDS CLK_1021 NC_010520.1 1785714 1786073 D identified by match to protein family HMM PF01325; iron-dependent repressor 1785714..1786073 Clostridium botulinum A3 str. Loch Maree 6151696 YP_001786964.1 CDS CLK_1022 NC_010520.1 1786171 1786578 D hypothetical protein 1786171..1786578 Clostridium botulinum A3 str. Loch Maree 6152425 YP_001786965.1 CDS CLK_1023 NC_010520.1 1786961 1787815 D identified by match to protein family HMM PF01966; match to protein family HMM PF08668; match to protein family HMM TIGR00277; HDIG domain-containing protein 1786961..1787815 Clostridium botulinum A3 str. Loch Maree 6153232 YP_001786966.1 CDS CLK_1024 NC_010520.1 1787925 1788110 D identified by Glimmer3; hypothetical protein 1787925..1788110 Clostridium botulinum A3 str. Loch Maree 6153530 YP_001786967.1 CDS CLK_1025 NC_010520.1 1788292 1790928 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase, P-type complement(1788292..1790928) Clostridium botulinum A3 str. Loch Maree 6154334 YP_001786968.1 CDS CLK_1026 NC_010520.1 1791651 1792013 D identified by match to protein family HMM PF00903; glyoxalase 1791651..1792013 Clostridium botulinum A3 str. Loch Maree 6154922 YP_001786969.1 CDS cat NC_010520.1 1792192 1792827 R identified by match to protein family HMM PF00302; chloramphenicol acetyltransferase complement(1792192..1792827) Clostridium botulinum A3 str. Loch Maree 6154142 YP_001786970.1 CDS CLK_1028 NC_010520.1 1792945 1793640 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 1792945..1793640 Clostridium botulinum A3 str. Loch Maree 6154080 YP_001786971.1 CDS CLK_1029 NC_010520.1 1794230 1794952 R identified by match to protein family HMM PF06445; transcription activator effector binding domain-containing protein complement(1794230..1794952) Clostridium botulinum A3 str. Loch Maree 6154294 YP_001786972.1 CDS CLK_1030 NC_010520.1 1795010 1795954 R identified by match to protein family HMM PF08220; match to protein family HMM PF08279; hypothetical protein complement(1795010..1795954) Clostridium botulinum A3 str. Loch Maree 6153439 YP_001786973.1 CDS CLK_1031 NC_010520.1 1796540 1797535 D identified by match to protein family HMM PF06050; 2-hydroxyglutaryl-CoA dehydratase subunit 1796540..1797535 Clostridium botulinum A3 str. Loch Maree 6153133 YP_001786974.1 CDS hgdC NC_010520.1 1797662 1798423 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; 2-hydroxyglutaryl-CoA dehydratase 1797662..1798423 Clostridium botulinum A3 str. Loch Maree 6151390 YP_001786975.1 CDS CLK_1033 NC_010520.1 1798441 1798872 D identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367; 6-pyruvoyl-tetrahydropterin synthase 1798441..1798872 Clostridium botulinum A3 str. Loch Maree 6154576 YP_001786976.1 CDS CLK_1034 NC_010520.1 1798874 1799539 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1798874..1799539 Clostridium botulinum A3 str. Loch Maree 6153799 YP_001786977.1 CDS folE NC_010520.1 1799543 1800133 D involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1799543..1800133 Clostridium botulinum A3 str. Loch Maree 6151846 YP_001786978.1 CDS CLK_1036 NC_010520.1 1800317 1800976 D identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; exoenzyme S synthesis protein B 1800317..1800976 Clostridium botulinum A3 str. Loch Maree 6152887 YP_001786979.1 CDS CLK_1037 NC_010520.1 1801080 1802024 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1801080..1802024 Clostridium botulinum A3 str. Loch Maree 6153309 YP_001786980.1 CDS CLK_1038 NC_010520.1 1802193 1802945 D identified by match to protein family HMM PF06161; hypothetical protein 1802193..1802945 Clostridium botulinum A3 str. Loch Maree 6154813 YP_001786981.1 CDS deoC NC_010520.1 1803269 1803907 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1803269..1803907 Clostridium botulinum A3 str. Loch Maree 6152289 YP_001786982.1 CDS rbsK NC_010520.1 1804259 1805161 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152; ribokinase 1804259..1805161 Clostridium botulinum A3 str. Loch Maree 6151462 YP_001786983.1 CDS CLK_1041 NC_010520.1 1805545 1806228 D identified by match to protein family HMM PF04239; hypothetical protein 1805545..1806228 Clostridium botulinum A3 str. Loch Maree 6153814 YP_001786984.1 CDS CLK_1042 NC_010520.1 1806346 1807041 D identified by match to protein family HMM PF04143; hypothetical protein 1806346..1807041 Clostridium botulinum A3 str. Loch Maree 6153087 YP_001786985.1 CDS CLK_1043 NC_010520.1 1807055 1807276 D identified by match to protein family HMM PF01206; hypothetical protein 1807055..1807276 Clostridium botulinum A3 str. Loch Maree 6152891 YP_001786986.1 CDS CLK_1044 NC_010520.1 1807294 1807821 D identified by match to protein family HMM PF04143; hypothetical protein 1807294..1807821 Clostridium botulinum A3 str. Loch Maree 6152129 YP_001786987.1 CDS CLK_1045 NC_010520.1 1807852 1808742 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1807852..1808742) Clostridium botulinum A3 str. Loch Maree 6154555 YP_001786988.1 CDS CLK_1046 NC_010520.1 1809005 1810255 D identified by match to protein family HMM PF01235; sodium:alanine symporter family protein 1809005..1810255 Clostridium botulinum A3 str. Loch Maree 6153503 YP_001786989.1 CDS CLK_1047 NC_010520.1 1810336 1812036 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1810336..1812036 Clostridium botulinum A3 str. Loch Maree 6153278 YP_001786990.1 CDS CLK_1048 NC_010520.1 1812189 1813445 D identified by match to protein family HMM PF04143; hypothetical protein 1812189..1813445 Clostridium botulinum A3 str. Loch Maree 6152697 YP_001786991.1 CDS CLK_1049 NC_010520.1 1813752 1814459 D identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein 1813752..1814459 Clostridium botulinum A3 str. Loch Maree 6152164 YP_001786992.1 CDS CLK_1050 NC_010520.1 1814462 1815193 D antibiotic ABC transporter permease 1814462..1815193 Clostridium botulinum A3 str. Loch Maree 6153004 YP_001786993.1 CDS CLK_1051 NC_010520.1 1815196 1815939 D antibiotic ABC transporter permease 1815196..1815939 Clostridium botulinum A3 str. Loch Maree 6153650 YP_001786994.1 CDS CLK_1052 NC_010520.1 1816056 1816715 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; antibiotic transporter response regulator 1816056..1816715 Clostridium botulinum A3 str. Loch Maree 6153518 YP_001786995.1 CDS CLK_1053 NC_010520.1 1816706 1818085 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; antibiotic transporter sensor protein 1816706..1818085 Clostridium botulinum A3 str. Loch Maree 6154521 YP_001786996.1 CDS arcA NC_010520.1 1818649 1819875 D identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078; arginine deiminase 1818649..1819875 Clostridium botulinum A3 str. Loch Maree 6151394 YP_001786997.1 CDS arcD NC_010520.1 1820000 1821418 D identified by match to protein family HMM PF00324; arginine/ornithine antiporter 1820000..1821418 Clostridium botulinum A3 str. Loch Maree 6152408 YP_001786998.1 CDS CLK_1056 NC_010520.1 1821637 1822287 R identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III complement(1821637..1822287) Clostridium botulinum A3 str. Loch Maree 6154065 YP_001786999.1 CDS CLK_1057 NC_010520.1 1822658 1823266 D identified by match to protein family HMM PF08876; hypothetical protein 1822658..1823266 Clostridium botulinum A3 str. Loch Maree 6154722 YP_001787000.1 CDS CLK_1058 NC_010520.1 1823605 1826898 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF04851; match to protein family HMM PF08455; SNF2 family helicase 1823605..1826898 Clostridium botulinum A3 str. Loch Maree 6151830 YP_001787001.1 CDS CLK_1059 NC_010520.1 1827088 1827903 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 1827088..1827903 Clostridium botulinum A3 str. Loch Maree 6154803 YP_001787002.1 CDS CLK_1060 NC_010520.1 1828328 1828783 D hypothetical protein 1828328..1828783 Clostridium botulinum A3 str. Loch Maree 6153722 YP_001787003.1 CDS CLK_1061 NC_010520.1 1829169 1830158 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1829169..1830158 Clostridium botulinum A3 str. Loch Maree 6152671 YP_001787004.1 CDS CLK_1064 NC_010520.1 1832069 1833793 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF02463; ABC transporter ATP-binding protein/permease 1832069..1833793 Clostridium botulinum A3 str. Loch Maree 6152038 YP_001787005.1 CDS CLK_1065 NC_010520.1 1834185 1835186 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1834185..1835186 Clostridium botulinum A3 str. Loch Maree 6154276 YP_001787006.1 CDS CLK_1066 NC_010520.1 1835479 1836426 D identified by match to protein family HMM PF00480; glucokinase 1835479..1836426 Clostridium botulinum A3 str. Loch Maree 6151661 YP_001787007.1 CDS CLK_1067 NC_010520.1 1836674 1838338 D identified by match to protein family HMM PF00128; glycosyl hydrolase 1836674..1838338 Clostridium botulinum A3 str. Loch Maree 6152641 YP_001787008.1 CDS CLK_1068 NC_010520.1 1838380 1840038 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR02003; PTS system glucose/glucoside family transporter subunit IIBC 1838380..1840038 Clostridium botulinum A3 str. Loch Maree 6153451 YP_001787009.1 CDS CLK_1069 NC_010520.1 1840042 1840833 D identified by match to protein family HMM PF03372; hypothetical protein 1840042..1840833 Clostridium botulinum A3 str. Loch Maree 6152562 YP_001787010.1 CDS CLK_1070 NC_010520.1 1841059 1841682 D identified by match to protein family HMM TIGR02840; hypothetical protein 1841059..1841682 Clostridium botulinum A3 str. Loch Maree 6153158 YP_001787011.1 CDS CLK_1071 NC_010520.1 1841970 1842305 R hypothetical protein complement(1841970..1842305) Clostridium botulinum A3 str. Loch Maree 6154189 YP_001787012.1 CDS CLK_1072 NC_010520.1 1842632 1844128 D hypothetical protein 1842632..1844128 Clostridium botulinum A3 str. Loch Maree 6152010 YP_001787013.1 CDS CLK_1073 NC_010520.1 1844229 1844684 D hypothetical protein 1844229..1844684 Clostridium botulinum A3 str. Loch Maree 6153066 YP_001787014.1 CDS CLK_1074 NC_010520.1 1844980 1847142 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1844980..1847142) Clostridium botulinum A3 str. Loch Maree 6153733 YP_001787015.1 CDS CLK_1075 NC_010520.1 1847120 1847812 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(1847120..1847812) Clostridium botulinum A3 str. Loch Maree 6154704 YP_001787016.1 CDS CLK_1076 NC_010520.1 1848394 1849623 D identified by match to protein family HMM PF07690; major facilitator family transporter 1848394..1849623 Clostridium botulinum A3 str. Loch Maree 6154153 YP_001787017.1 CDS CLK_1077 NC_010520.1 1849906 1850025 R hypothetical protein complement(1849906..1850025) Clostridium botulinum A3 str. Loch Maree 6154014 YP_001787018.1 CDS CLK_1078 NC_010520.1 1850081 1850368 D identified by Glimmer3; hypothetical protein 1850081..1850368 Clostridium botulinum A3 str. Loch Maree 6152510 YP_001787019.1 CDS CLK_1079 NC_010520.1 1850616 1851476 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase complement(1850616..1851476) Clostridium botulinum A3 str. Loch Maree 6154474 YP_001787020.1 CDS CLK_1080 NC_010520.1 1851485 1852252 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator complement(1851485..1852252) Clostridium botulinum A3 str. Loch Maree 6151935 YP_001787021.1 CDS CLK_1081 NC_010520.1 1852515 1853246 R hypothetical protein complement(1852515..1853246) Clostridium botulinum A3 str. Loch Maree 6152735 YP_001787022.1 CDS CLK_1082 NC_010520.1 1853386 1853925 D identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; RNA polymerase sigma factor 1853386..1853925 Clostridium botulinum A3 str. Loch Maree 6154043 YP_001787023.1 CDS CLK_1083 NC_010520.1 1854115 1854294 D hypothetical protein 1854115..1854294 Clostridium botulinum A3 str. Loch Maree 6154279 YP_001787024.1 CDS CLK_1084 NC_010520.1 1854599 1858228 R identified by match to protein family HMM PF00801; match to protein family HMM PF01752; match to protein family HMM PF04151; match to protein family HMM PF08453; collagenase complement(1854599..1858228) Clostridium botulinum A3 str. Loch Maree 6154637 YP_001787025.1 CDS metF NC_010520.1 1858702 1859589 D identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 1858702..1859589 Clostridium botulinum A3 str. Loch Maree 6153586 YP_001787026.1 CDS CLK_1086 NC_010520.1 1859762 1860442 D identified by match to protein family HMM PF02965; hypothetical protein 1859762..1860442 Clostridium botulinum A3 str. Loch Maree 6152785 YP_001787027.1 CDS CLK_1087 NC_010520.1 1860432 1862810 D identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; 5-methyltetrahydrofolate--homocysteine methyltransferase 1860432..1862810 Clostridium botulinum A3 str. Loch Maree 6151968 YP_001787028.1 CDS CLK_1088 NC_010520.1 1863190 1863609 R hypothetical protein complement(1863190..1863609) Clostridium botulinum A3 str. Loch Maree 6154335 YP_001787029.1 CDS CLK_1089 NC_010520.1 1864017 1864343 D identified by Glimmer3; hypothetical protein 1864017..1864343 Clostridium botulinum A3 str. Loch Maree 6151470 YP_001787030.1 CDS CLK_1090 NC_010520.1 1865015 1865587 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 1865015..1865587 Clostridium botulinum A3 str. Loch Maree 6152284 YP_001787031.1 CDS CLK_1091 NC_010520.1 1865580 1867067 D hypothetical protein 1865580..1867067 Clostridium botulinum A3 str. Loch Maree 6153522 YP_001787032.1 CDS acoR NC_010520.1 1867398 1869350 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; aco operon transcriptional regulator 1867398..1869350 Clostridium botulinum A3 str. Loch Maree 6151728 YP_001787033.1 CDS CLK_1093 NC_010520.1 1869526 1869891 D identified by match to protein family HMM TIGR02058; hypothetical protein 1869526..1869891 Clostridium botulinum A3 str. Loch Maree 6152531 YP_001787034.1 CDS acoA NC_010520.1 1869912 1870895 D identified by match to protein family HMM PF00676; TPP-dependent acetoin dehydrogenase complex, E1 component subunit alpha 1869912..1870895 Clostridium botulinum A3 str. Loch Maree 6153790 YP_001787035.1 CDS acoB NC_010520.1 1870898 1871869 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; TPP-dependent acetoin dehydrogenase complex, E1 component subunit beta 1870898..1871869 Clostridium botulinum A3 str. Loch Maree 6154609 YP_001787036.1 CDS acoX NC_010520.1 1871921 1872916 D identified by match to protein family HMM PF01513; acetoin catabolism protein X 1871921..1872916 Clostridium botulinum A3 str. Loch Maree 6152814 YP_001787037.1 CDS acoC NC_010520.1 1872952 1874262 D identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase 1872952..1874262 Clostridium botulinum A3 str. Loch Maree 6153978 YP_001787038.1 CDS acoL NC_010520.1 1874275 1875666 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase 1874275..1875666 Clostridium botulinum A3 str. Loch Maree 6153373 YP_001787039.1 CDS CLK_1099 NC_010520.1 1875691 1876686 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 1875691..1876686 Clostridium botulinum A3 str. Loch Maree 6154486 YP_001787040.1 CDS CLK_1100 NC_010520.1 1877074 1878219 D identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1877074..1878219 Clostridium botulinum A3 str. Loch Maree 6151607 YP_001787041.1 CDS CLK_1101 NC_010520.1 1878212 1879795 D identified by match to protein family HMM PF00528; match to protein family HMM PF04069; glycine betaine/L-proline ABC transporter permease/glycine betaine/L-proline-binding protein 1878212..1879795 Clostridium botulinum A3 str. Loch Maree 6152323 YP_001787042.1 CDS thrC NC_010520.1 1880092 1881573 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1880092..1881573 Clostridium botulinum A3 str. Loch Maree 6153624 YP_001787043.1 CDS thrB NC_010520.1 1881583 1882476 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1881583..1882476 Clostridium botulinum A3 str. Loch Maree 6152168 YP_001787044.1 CDS CLK_1104 NC_010520.1 1882603 1883922 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 1882603..1883922 Clostridium botulinum A3 str. Loch Maree 6152983 YP_001787045.1 CDS hom NC_010520.1 1884145 1885422 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1884145..1885422 Clostridium botulinum A3 str. Loch Maree 6154603 YP_001787046.1 CDS CLK_1106 NC_010520.1 1886054 1887964 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator 1886054..1887964 Clostridium botulinum A3 str. Loch Maree 6153771 YP_001787047.1 CDS CLK_1107 NC_010520.1 1888474 1889640 D identified by match to protein family HMM PF00465; NADH-dependent butanol dehydrogenase 1888474..1889640 Clostridium botulinum A3 str. Loch Maree 6153500 YP_001787048.1 CDS CLK_1108 NC_010520.1 1889969 1890856 D identified by match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin-NADP reductase 1889969..1890856 Clostridium botulinum A3 str. Loch Maree 6152631 YP_001787049.1 CDS gltA NC_010520.1 1890856 1892238 D function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1890856..1892238 Clostridium botulinum A3 str. Loch Maree 6152985 YP_001787050.1 CDS CLK_1110 NC_010520.1 1892467 1894431 D identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM PF07728; sensory box sigma-54 dependent transcriptional regulator 1892467..1894431 Clostridium botulinum A3 str. Loch Maree 6152138 YP_001787051.1 CDS CLK_1111 NC_010520.1 1894438 1895139 D identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 1894438..1895139 Clostridium botulinum A3 str. Loch Maree 6154139 YP_001787052.1 CDS CLK_1112 NC_010520.1 1895563 1896921 D identified by Glimmer3; hypothetical protein 1895563..1896921 Clostridium botulinum A3 str. Loch Maree 6153365 YP_001787053.1 CDS CLK_1113 NC_010520.1 1897015 1897212 D identified by Glimmer3; hypothetical protein 1897015..1897212 Clostridium botulinum A3 str. Loch Maree 6153623 YP_001787054.1 CDS CLK_1114 NC_010520.1 1897415 1897576 D lipoprotein 1897415..1897576 Clostridium botulinum A3 str. Loch Maree 6154239 YP_001787055.1 CDS CLK_1115 NC_010520.1 1897926 1898087 D hypothetical protein 1897926..1898087 Clostridium botulinum A3 str. Loch Maree 6151981 YP_001787056.1 CDS CLK_1116 NC_010520.1 1898195 1898377 D bacteriophage endolysin 1898195..1898377 Clostridium botulinum A3 str. Loch Maree 6152525 YP_001787057.1 CDS CLK_1117 NC_010520.1 1898668 1898883 D hypothetical protein 1898668..1898883 Clostridium botulinum A3 str. Loch Maree 6153072 YP_001787058.1 CDS CLK_1118 NC_010520.1 1899379 1899615 D identified by Glimmer3; hypothetical protein 1899379..1899615 Clostridium botulinum A3 str. Loch Maree 6154297 YP_001787059.1 CDS CLK_1119 NC_010520.1 1899771 1900322 D hypothetical protein 1899771..1900322 Clostridium botulinum A3 str. Loch Maree 6153639 YP_001787060.1 CDS CLK_1120 NC_010520.1 1900360 1900647 D hypothetical protein 1900360..1900647 Clostridium botulinum A3 str. Loch Maree 6152862 YP_001787061.1 CDS CLK_1121 NC_010520.1 1901148 1901780 D hypothetical protein 1901148..1901780 Clostridium botulinum A3 str. Loch Maree 6152490 YP_001787062.1 CDS CLK_1122 NC_010520.1 1901813 1902367 D identified by match to protein family HMM PF01814; hypothetical protein 1901813..1902367 Clostridium botulinum A3 str. Loch Maree 6151776 YP_001787063.1 CDS alr NC_010520.1 1902805 1903974 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1902805..1903974 Clostridium botulinum A3 str. Loch Maree 6154220 YP_001787064.1 CDS CLK_1124 NC_010520.1 1904433 1905905 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1904433..1905905 Clostridium botulinum A3 str. Loch Maree 6153306 YP_001787065.1 CDS CLK_1125 NC_010520.1 1905963 1907303 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease 1905963..1907303 Clostridium botulinum A3 str. Loch Maree 6152904 YP_001787066.1 CDS CLK_1126 NC_010520.1 1907541 1908374 D identified by match to protein family HMM PF06161; hypothetical protein 1907541..1908374 Clostridium botulinum A3 str. Loch Maree 6151892 YP_001787067.1 CDS CLK_1127 NC_010520.1 1908591 1909475 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase complement(1908591..1909475) Clostridium botulinum A3 str. Loch Maree 6154865 YP_001787068.1 CDS CLK_1128 NC_010520.1 1909967 1911973 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1909967..1911973 Clostridium botulinum A3 str. Loch Maree 6154081 YP_001787069.1 CDS CLK_1129 NC_010520.1 1912884 1913897 D identified by match to protein family HMM PF07656; hypothetical protein 1912884..1913897 Clostridium botulinum A3 str. Loch Maree 6154393 YP_001787070.1 CDS CLK_1130 NC_010520.1 1914050 1914601 R hypothetical protein complement(1914050..1914601) Clostridium botulinum A3 str. Loch Maree 6151596 YP_001787071.1 CDS CLK_1131 NC_010520.1 1914961 1918194 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM PF08455; Snf2/Rad54 family helicase 1914961..1918194 Clostridium botulinum A3 str. Loch Maree 6152655 YP_001787072.1 CDS CLK_1132 NC_010520.1 1918250 1918654 R identified by match to protein family HMM PF01980; match to protein family HMM TIGR00104; hypothetical protein complement(1918250..1918654) Clostridium botulinum A3 str. Loch Maree 6153839 YP_001787073.1 CDS CLK_1133 NC_010520.1 1919207 1919731 D identified by match to protein family HMM PF02663; formylmethanofuran dehydrogenase E subunit-like protein 1919207..1919731 Clostridium botulinum A3 str. Loch Maree 6152452 YP_001787074.1 CDS CLK_1134 NC_010520.1 1919868 1921463 D identified by match to protein family HMM PF00496; peptide/opine/nickel uptake ABC transporter substrate-binding protein 1919868..1921463 Clostridium botulinum A3 str. Loch Maree 6153440 YP_001787075.1 CDS CLK_1135 NC_010520.1 1921477 1922451 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1921477..1922451 Clostridium botulinum A3 str. Loch Maree 6153785 YP_001787076.1 CDS CLK_1136 NC_010520.1 1922455 1923276 D identified by match to protein family HMM PF00528; peptide/opine/nickel uptake ABC transporter permease 1922455..1923276 Clostridium botulinum A3 str. Loch Maree 6154654 YP_001787077.1 CDS CLK_1137 NC_010520.1 1923307 1924989 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 1923307..1924989 Clostridium botulinum A3 str. Loch Maree 6152720 YP_001787078.1 CDS CLK_1138 NC_010520.1 1925225 1925812 R identified by match to protein family HMM PF00929; DNA polymerase III subunit epsilon complement(1925225..1925812) Clostridium botulinum A3 str. Loch Maree 6153922 YP_001787079.1 CDS CLK_1139 NC_010520.1 1926107 1927057 D identified by match to protein family HMM PF06207; hypothetical protein 1926107..1927057 Clostridium botulinum A3 str. Loch Maree 6153828 YP_001787080.1 CDS CLK_1140 NC_010520.1 1927329 1927964 D identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methlytransferase 1927329..1927964 Clostridium botulinum A3 str. Loch Maree 6154667 YP_001787081.1 CDS CLK_1141 NC_010520.1 1928059 1928499 R identified by match to protein family HMM PF00011; heat shock protein complement(1928059..1928499) Clostridium botulinum A3 str. Loch Maree 6151670 YP_001787082.1 CDS CLK_1142 NC_010520.1 1928826 1930010 D identified by match to protein family HMM PF07690; major facilitator family protein 1928826..1930010 Clostridium botulinum A3 str. Loch Maree 6152584 YP_001787083.1 CDS CLK_1143 NC_010520.1 1930158 1930721 D identified by match to protein family HMM PF00440; hypothetical protein 1930158..1930721 Clostridium botulinum A3 str. Loch Maree 6153404 YP_001787084.1 CDS CLK_1144 NC_010520.1 1930714 1930896 D hypothetical protein 1930714..1930896 Clostridium botulinum A3 str. Loch Maree 6154223 YP_001787085.1 CDS fruK NC_010520.1 1930922 1931827 D identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; fructose-1-phosphate kinase 1930922..1931827 Clostridium botulinum A3 str. Loch Maree 6151678 YP_001787086.1 CDS CLK_1146 NC_010520.1 1931944 1933323 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(1931944..1933323) Clostridium botulinum A3 str. Loch Maree 6152505 YP_001787087.1 CDS CLK_1147 NC_010520.1 1933927 1934082 D identified by Glimmer3; hypothetical protein 1933927..1934082 Clostridium botulinum A3 str. Loch Maree 6153397 YP_001787088.1 CDS CLK_1148 NC_010520.1 1934233 1935207 D hypothetical protein 1934233..1935207 Clostridium botulinum A3 str. Loch Maree 6154132 YP_001787089.1 CDS CLK_1149 NC_010520.1 1935493 1936026 R hypothetical protein complement(1935493..1936026) Clostridium botulinum A3 str. Loch Maree 6154896 YP_001787090.1 CDS CLK_1150 NC_010520.1 1936289 1936444 D identified by Glimmer3; hypothetical protein 1936289..1936444 Clostridium botulinum A3 str. Loch Maree 6152203 YP_001787091.1 CDS CLK_1151 NC_010520.1 1936481 1937440 D identified by match to protein family HMM PF00294; match to protein family HMM PF08543; PfkB family kinase 1936481..1937440 Clostridium botulinum A3 str. Loch Maree 6152799 YP_001787092.1 CDS safA NC_010520.1 1937591 1938226 R identified by match to protein family HMM PF00188; match to protein family HMM PF01476; match to protein family HMM TIGR02899; spore coat assembly protein SafA complement(1937591..1938226) Clostridium botulinum A3 str. Loch Maree 6153816 YP_001787093.1 CDS CLK_1153 NC_010520.1 1938628 1939038 R identified by Glimmer3; hypothetical protein complement(1938628..1939038) Clostridium botulinum A3 str. Loch Maree 6152457 YP_001787094.1 CDS CLK_1154 NC_010520.1 1939385 1939594 D identified by match to protein family HMM PF00313; cold shock protein 1939385..1939594 Clostridium botulinum A3 str. Loch Maree 6153245 YP_001787095.1 CDS CLK_1155 NC_010520.1 1939965 1941968 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein 1939965..1941968 Clostridium botulinum A3 str. Loch Maree 6154620 YP_001787096.1 CDS CLK_1156 NC_010520.1 1942132 1943712 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(1942132..1943712) Clostridium botulinum A3 str. Loch Maree 6151707 YP_001787097.1 CDS CLK_1157 NC_010520.1 1943989 1944483 D identified by match to protein family HMM PF04073; prolyl-tRNA synthetase 1943989..1944483 Clostridium botulinum A3 str. Loch Maree 6151996 YP_001787098.1 CDS CLK_1158 NC_010520.1 1945021 1945875 D identified by match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite/nitrite reductase 1945021..1945875 Clostridium botulinum A3 str. Loch Maree 6152711 YP_001787099.1 CDS cheV NC_010520.1 1946085 1946978 R identified by match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV complement(1946085..1946978) Clostridium botulinum A3 str. Loch Maree 6154967 YP_001787100.1 CDS CLK_1160 NC_010520.1 1947348 1948613 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 1947348..1948613 Clostridium botulinum A3 str. Loch Maree 6153905 YP_001787101.1 CDS CLK_1161 NC_010520.1 1948936 1949772 D identified by match to protein family HMM PF00575; RNA-binding protein 1948936..1949772 Clostridium botulinum A3 str. Loch Maree 6153848 YP_001787102.1 CDS deaD NC_010520.1 1949960 1951405 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent RNA helicase DeaD 1949960..1951405 Clostridium botulinum A3 str. Loch Maree 6152779 YP_001787103.1 CDS CLK_1163 NC_010520.1 1951559 1956016 D identified by Glimmer3; hypothetical protein 1951559..1956016 Clostridium botulinum A3 str. Loch Maree 6151995 YP_001787104.1 CDS CLK_1164 NC_010520.1 1956410 1960489 D identified by match to protein family HMM PF00560; match to protein family HMM PF07532; hypothetical protein 1956410..1960489 Clostridium botulinum A3 str. Loch Maree 6153504 YP_001787105.1 CDS CLK_1165 NC_010520.1 1960945 1961874 D identified by match to protein family HMM PF01832; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase domain-containing protein 1960945..1961874 Clostridium botulinum A3 str. Loch Maree 6151561 YP_001787106.1 CDS CLK_1166 NC_010520.1 1962000 1962515 R identified by match to protein family HMM PF00210; ferritin complement(1962000..1962515) Clostridium botulinum A3 str. Loch Maree 6154177 YP_001787107.1 CDS CLK_1167 NC_010520.1 1962920 1963774 D identified by match to protein family HMM PF00072; match to protein family HMM PF04509; chemotaxis response regulator/CheC-like domain-containing protein 1962920..1963774 Clostridium botulinum A3 str. Loch Maree 6153935 YP_001787108.1 CDS cheX NC_010520.1 1963774 1964253 D identified by match to protein family HMM PF04509; chemotaxis protein CheX 1963774..1964253 Clostridium botulinum A3 str. Loch Maree 6152849 YP_001787109.1 CDS CLK_1169 NC_010520.1 1964419 1965777 R identified by match to protein family HMM PF07670; hypothetical protein complement(1964419..1965777) Clostridium botulinum A3 str. Loch Maree 6154008 YP_001787110.1 CDS CLK_1170 NC_010520.1 1966515 1966718 D identified by match to protein family HMM PF00269; small, acid-soluble spore protein alpha 1966515..1966718 Clostridium botulinum A3 str. Loch Maree 6153776 YP_001787111.1 CDS CLK_1171 NC_010520.1 1966779 1966979 D identified by match to protein family HMM PF00269; small, acid-soluble spore protein beta 1966779..1966979 Clostridium botulinum A3 str. Loch Maree 6152743 YP_001787112.1 CDS CLK_1172 NC_010520.1 1967157 1967294 R hypothetical protein complement(1967157..1967294) Clostridium botulinum A3 str. Loch Maree 6154465 YP_001787113.1 CDS xerC NC_010520.1 1968393 1969373 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 1968393..1969373 Clostridium botulinum A3 str. Loch Maree 6154798 YP_001787114.1 CDS CLK_1174 NC_010520.1 1969684 1970157 R hypothetical protein complement(1969684..1970157) Clostridium botulinum A3 str. Loch Maree 6154229 YP_001787115.1 CDS lexA NC_010520.1 1970455 1971060 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1970455..1971060 Clostridium botulinum A3 str. Loch Maree 6151768 YP_001787116.1 CDS CLK_1176 NC_010520.1 1971257 1972540 R identified by match to protein family HMM PF01053; match to protein family HMM PF06838; aluminum resistance protein complement(1971257..1972540) Clostridium botulinum A3 str. Loch Maree 6152635 YP_001787117.1 CDS CLK_1177 NC_010520.1 1972500 1972616 R identified by Glimmer3; hypothetical protein complement(1972500..1972616) Clostridium botulinum A3 str. Loch Maree 6153866 YP_001787118.1 CDS hfq NC_010520.1 1972641 1972898 R identified by match to protein family HMM PF01423; match to protein family HMM TIGR02383; RNA chaperone Hfq complement(1972641..1972898) Clostridium botulinum A3 str. Loch Maree 6154649 YP_001787119.1 CDS miaA NC_010520.1 1972984 1973919 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1972984..1973919) Clostridium botulinum A3 str. Loch Maree 6152898 YP_001787120.1 CDS mutL NC_010520.1 1973936 1975936 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(1973936..1975936) Clostridium botulinum A3 str. Loch Maree 6153743 YP_001787121.1 CDS mutS NC_010520.1 1976082 1978880 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1976082..1978880) Clostridium botulinum A3 str. Loch Maree 6154308 YP_001787122.1 CDS miaB NC_010520.1 1978960 1980312 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(1978960..1980312) Clostridium botulinum A3 str. Loch Maree 6152120 YP_001787123.1 CDS CLK_1183 NC_010520.1 1980784 1981974 D identified by match to protein family HMM PF00155; aminotransferase, classes I and II 1980784..1981974 Clostridium botulinum A3 str. Loch Maree 6152692 YP_001787124.1 CDS CLK_1184 NC_010520.1 1982059 1982220 D hypothetical protein 1982059..1982220 Clostridium botulinum A3 str. Loch Maree 6153287 YP_001787125.1 CDS aspB NC_010520.1 1982275 1983465 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1982275..1983465 Clostridium botulinum A3 str. Loch Maree 6152473 YP_001787126.1 CDS CLK_1186 NC_010520.1 1983498 1984364 R identified by match to protein family HMM PF00583; acetyltransferase complement(1983498..1984364) Clostridium botulinum A3 str. Loch Maree 6153345 YP_001787127.1 CDS CLK_1187 NC_010520.1 1984446 1985504 R identified by match to protein family HMM TIGR02906; spore coat protein complement(1984446..1985504) Clostridium botulinum A3 str. Loch Maree 6153669 YP_001787128.1 CDS CLK_1188 NC_010520.1 1985751 1987667 R these proteins appear to have resulted from a fusion of lytB and rpsA; catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1985751..1987667) Clostridium botulinum A3 str. Loch Maree 6151702 YP_001787129.1 CDS cmk NC_010520.1 1987732 1988385 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1987732..1988385) Clostridium botulinum A3 str. Loch Maree 6151771 YP_001787130.1 CDS aroH NC_010520.1 1988461 1988832 R identified by match to protein family HMM PF07736; match to protein family HMM TIGR01796; chorismate mutase complement(1988461..1988832) Clostridium botulinum A3 str. Loch Maree 6152618 YP_001787131.1 CDS CLK_1191 NC_010520.1 1988832 1990055 R identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR00275; pyridine nucleotide-disulfide oxidoreductase complement(1988832..1990055) Clostridium botulinum A3 str. Loch Maree 6153203 YP_001787132.1 CDS gluD NC_010520.1 1990349 1991614 R identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase complement(1990349..1991614) Clostridium botulinum A3 str. Loch Maree 6154445 YP_001787133.1 CDS CLK_1193 NC_010520.1 1991848 1992732 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator complement(1991848..1992732) Clostridium botulinum A3 str. Loch Maree 6152436 YP_001787134.1 CDS rluB NC_010520.1 1993114 1993824 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B complement(1993114..1993824) Clostridium botulinum A3 str. Loch Maree 6153501 YP_001787135.1 CDS CLK_1195 NC_010520.1 1993926 1994039 D hypothetical protein 1993926..1994039 Clostridium botulinum A3 str. Loch Maree 6154988 YP_001787136.1 CDS CLK_1196 NC_010520.1 1994050 1995339 R hypothetical protein complement(1994050..1995339) Clostridium botulinum A3 str. Loch Maree 6151396 YP_001787137.1 CDS CLK_1197 NC_010520.1 1995437 1996717 R identified by match to protein family HMM PF06354; hypothetical protein complement(1995437..1996717) Clostridium botulinum A3 str. Loch Maree 6152009 YP_001787138.1 CDS CLK_1198 NC_010520.1 1997012 1998415 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(1997012..1998415) Clostridium botulinum A3 str. Loch Maree 6153058 YP_001787139.1 CDS CLK_1199 NC_010520.1 1998785 1998976 D identified by Glimmer3; hypothetical protein 1998785..1998976 Clostridium botulinum A3 str. Loch Maree 6152570 YP_001787140.1 CDS CLK_1200 NC_010520.1 1999364 2001385 D identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 1999364..2001385 Clostridium botulinum A3 str. Loch Maree 6153526 YP_001787141.1 CDS CLK_1201 NC_010520.1 2001429 2002115 R identified by match to protein family HMM PF02683; cytochrome c-type biogenesis protein complement(2001429..2002115) Clostridium botulinum A3 str. Loch Maree 6151692 YP_001787142.1 CDS CLK_1202 NC_010520.1 2002117 2002548 R identified by match to protein family HMM PF00085; thioredoxin family protein complement(2002117..2002548) Clostridium botulinum A3 str. Loch Maree 6151979 YP_001787143.1 CDS CLK_1203 NC_010520.1 2002663 2003499 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(2002663..2003499) Clostridium botulinum A3 str. Loch Maree 6152812 YP_001787144.1 CDS CLK_1204 NC_010520.1 2003618 2004172 R identified by Glimmer3; hypothetical protein complement(2003618..2004172) Clostridium botulinum A3 str. Loch Maree 6154098 YP_001787145.1 CDS CLK_1205 NC_010520.1 2004584 2006017 D identified by match to protein family HMM PF00999; match to protein family HMM PF02080; monovalent cation:proton antiporter-2 (CPA2) family protein 2004584..2006017 Clostridium botulinum A3 str. Loch Maree 6151893 YP_001787146.1 CDS pcaC NC_010520.1 2006155 2006499 R identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase complement(2006155..2006499) Clostridium botulinum A3 str. Loch Maree 6152865 YP_001787147.1 CDS CLK_1207 NC_010520.1 2006867 2007388 R identified by match to protein family HMM PF00583; acetyltransferase complement(2006867..2007388) Clostridium botulinum A3 str. Loch Maree 6153472 YP_001787148.1 CDS CLK_1208 NC_010520.1 2007573 2008067 R lipoprotein complement(2007573..2008067) Clostridium botulinum A3 str. Loch Maree 6154433 YP_001787149.1 CDS CLK_1209 NC_010520.1 2008301 2008612 R identified by match to protein family HMM PF01906; hypothetical protein complement(2008301..2008612) Clostridium botulinum A3 str. Loch Maree 6152611 YP_001787150.1 CDS CLK_1210 NC_010520.1 2008679 2008822 R identified by Glimmer3; hypothetical protein complement(2008679..2008822) Clostridium botulinum A3 str. Loch Maree 6154581 YP_001787151.1 CDS CLK_1211 NC_010520.1 2008956 2009198 D hypothetical protein 2008956..2009198 Clostridium botulinum A3 str. Loch Maree 6153363 YP_001787152.1 CDS CLK_1212 NC_010520.1 2009201 2010925 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; match to protein family HMM PF04060; match to protein family HMM TIGR00229; sensory box-containing [Fe] hydrogenase 2009201..2010925 Clostridium botulinum A3 str. Loch Maree 6152512 YP_001787153.1 CDS CLK_1213 NC_010520.1 2010922 2012091 D identified by match to protein family HMM PF07228; sporulation domain-containing protein 2010922..2012091 Clostridium botulinum A3 str. Loch Maree 6152184 YP_001787154.1 CDS CLK_1214 NC_010520.1 2012225 2013964 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; match to protein family HMM PF04060; match to protein family HMM TIGR00229; sensory box-containing [Fe] hydrogenase 2012225..2013964 Clostridium botulinum A3 str. Loch Maree 6154180 YP_001787155.1 CDS hypE NC_010520.1 2014431 2015435 R identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE complement(2014431..2015435) Clostridium botulinum A3 str. Loch Maree 6153046 YP_001787156.1 CDS hypD NC_010520.1 2015602 2016675 R identified by match to protein family HMM PF01924; hydrogenase expression/formation protein HypD complement(2015602..2016675) Clostridium botulinum A3 str. Loch Maree 6152205 YP_001787157.1 CDS CLK_1217 NC_010520.1 2016668 2016895 R identified by Glimmer3; hypothetical protein complement(2016668..2016895) Clostridium botulinum A3 str. Loch Maree 6151687 YP_001787158.1 CDS hypF NC_010520.1 2016858 2019296 R identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF complement(2016858..2019296) Clostridium botulinum A3 str. Loch Maree 6153857 YP_001787159.1 CDS CLK_1219 NC_010520.1 2019280 2019450 R identified by Glimmer3; hypothetical protein complement(2019280..2019450) Clostridium botulinum A3 str. Loch Maree 6153564 YP_001787160.1 CDS CLK_1220 NC_010520.1 2019533 2019688 R hypothetical protein complement(2019533..2019688) Clostridium botulinum A3 str. Loch Maree 6152708 YP_001787161.1 CDS CLK_1221 NC_010520.1 2019808 2020323 R identified by match to protein family HMM PF00173; heme/steroid binding domain-containing protein complement(2019808..2020323) Clostridium botulinum A3 str. Loch Maree 6154387 YP_001787162.1 CDS CLK_1222 NC_010520.1 2020480 2020896 R identified by match to protein family HMM TIGR00072; hydrogenase maturation protease complement(2020480..2020896) Clostridium botulinum A3 str. Loch Maree 6153600 YP_001787163.1 CDS hupL NC_010520.1 2020929 2022344 R identified by match to protein family HMM PF00374; [Ni/Fe] hydrogenase, large subunit complement(2020929..2022344) Clostridium botulinum A3 str. Loch Maree 6154035 YP_001787164.1 CDS hupS NC_010520.1 2022446 2023318 R identified by match to protein family HMM PF01058; match to protein family HMM TIGR00391; [Ni/Fe] hydrogenase, small subunit complement(2022446..2023318) Clostridium botulinum A3 str. Loch Maree 6151482 YP_001787165.1 CDS CLK_1225 NC_010520.1 2023602 2024303 D TraX family protein 2023602..2024303 Clostridium botulinum A3 str. Loch Maree 6154862 YP_001787166.1 CDS CLK_1226 NC_010520.1 2024724 2024891 D identified by Glimmer3; hypothetical protein 2024724..2024891 Clostridium botulinum A3 str. Loch Maree 6153729 YP_001787167.1 CDS carB NC_010520.1 2025569 2028775 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(2025569..2028775) Clostridium botulinum A3 str. Loch Maree 6153229 YP_001787168.1 CDS carA NC_010520.1 2028803 2029852 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(2028803..2029852) Clostridium botulinum A3 str. Loch Maree 6152176 YP_001787169.1 CDS CLK_1229 NC_010520.1 2030369 2030536 D identified by Glimmer3; hypothetical protein 2030369..2030536 Clostridium botulinum A3 str. Loch Maree 6151978 YP_001787170.1 CDS CLK_1230 NC_010520.1 2031026 2031394 D identified by match to protein family HMM PF00005; daunorubicin resistance ATP-binding protein DrrA 2031026..2031394 Clostridium botulinum A3 str. Loch Maree 6152801 YP_001787171.1 CDS CLK_1231 NC_010520.1 2032108 2033664 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(2032108..2033664) Clostridium botulinum A3 str. Loch Maree 6151994 YP_001787172.1 CDS CLK_1232 NC_010520.1 2034014 2035747 R identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM TIGR02512; [Fe] hydrogenase complement(2034014..2035747) Clostridium botulinum A3 str. Loch Maree 6154855 YP_001787173.1 CDS CLK_1233 NC_010520.1 2035767 2037662 R identified by match to protein family HMM PF00037; match to protein family HMM PF01512; [Fe] hydrogenase, electron-transfer subunit complement(2035767..2037662) Clostridium botulinum A3 str. Loch Maree 6154003 YP_001787174.1 CDS CLK_1234 NC_010520.1 2037674 2038153 R identified by match to protein family HMM PF01257; Fe] hydrogenase, electron-transfer subunit complement(2037674..2038153) Clostridium botulinum A3 str. Loch Maree 6152464 YP_001787175.1 CDS CLK_1235 NC_010520.1 2038412 2038543 R identified by Glimmer3; hypothetical protein complement(2038412..2038543) Clostridium botulinum A3 str. Loch Maree 6151450 YP_001787176.1 CDS CLK_1236 NC_010520.1 2038772 2039959 R identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein complement(2038772..2039959) Clostridium botulinum A3 str. Loch Maree 6154327 YP_001787177.1 CDS CLK_1237 NC_010520.1 2040221 2041099 R identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase complement(2040221..2041099) Clostridium botulinum A3 str. Loch Maree 6153467 YP_001787178.1 CDS CLK_1238 NC_010520.1 2041341 2042435 D identified by match to protein family HMM PF01594; hypothetical protein 2041341..2042435 Clostridium botulinum A3 str. Loch Maree 6151431 YP_001787179.1 CDS dacB NC_010520.1 2042545 2043681 R identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase complement(2042545..2043681) Clostridium botulinum A3 str. Loch Maree 6152235 YP_001787180.1 CDS CLK_1240 NC_010520.1 2043866 2044378 D hypothetical protein 2043866..2044378 Clostridium botulinum A3 str. Loch Maree 6154884 YP_001787181.1 CDS ytfJ NC_010520.1 2044446 2044886 D identified by match to protein family HMM TIGR02874; sporulation protein YtfJ 2044446..2044886 Clostridium botulinum A3 str. Loch Maree 6153384 YP_001787182.1 CDS scpB NC_010520.1 2044947 2045528 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpA; forms a homodimer; segregation and condensation protein B complement(2044947..2045528) Clostridium botulinum A3 str. Loch Maree 6152344 YP_001787183.1 CDS scpA NC_010520.1 2045521 2046267 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(2045521..2046267) Clostridium botulinum A3 str. Loch Maree 6151733 YP_001787184.1 CDS CLK_1244 NC_010520.1 2046401 2046832 R hypothetical protein complement(2046401..2046832) Clostridium botulinum A3 str. Loch Maree 6154019 YP_001787185.1 CDS dacF NC_010520.1 2047057 2048280 R identified by match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase complement(2047057..2048280) Clostridium botulinum A3 str. Loch Maree 6152774 YP_001787186.1 CDS CLK_1246 NC_010520.1 2048403 2049125 R hypothetical protein complement(2048403..2049125) Clostridium botulinum A3 str. Loch Maree 6153362 YP_001787187.1 CDS CLK_1247 NC_010520.1 2049271 2050329 R identified by match to protein family HMM PF03372; hypothetical protein complement(2049271..2050329) Clostridium botulinum A3 str. Loch Maree 6152567 YP_001787188.1 CDS CLK_1248 NC_010520.1 2050471 2050719 R hypothetical protein complement(2050471..2050719) Clostridium botulinum A3 str. Loch Maree 6151803 YP_001787189.1 CDS pdp NC_010520.1 2050826 2052130 R identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase complement(2050826..2052130) Clostridium botulinum A3 str. Loch Maree 6152369 YP_001787190.1 CDS punA NC_010520.1 2052416 2053231 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(2052416..2053231) Clostridium botulinum A3 str. Loch Maree 6152000 YP_001787191.1 CDS xerD NC_010520.1 2053269 2054144 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD complement(2053269..2054144) Clostridium botulinum A3 str. Loch Maree 6152766 YP_001787192.1 CDS CLK_1252 NC_010520.1 2054207 2054434 R hypothetical protein complement(2054207..2054434) Clostridium botulinum A3 str. Loch Maree 6154088 YP_001787193.1 CDS CLK_1253 NC_010520.1 2054425 2055078 R identified by match to protein family HMM PF01944; match to protein family HMM TIGR02831; sporulation protein complement(2054425..2055078) Clostridium botulinum A3 str. Loch Maree 6154873 YP_001787194.1 CDS CLK_1254 NC_010520.1 2055119 2055232 D identified by Glimmer3; hypothetical protein 2055119..2055232 Clostridium botulinum A3 str. Loch Maree 6152328 YP_001787195.1 CDS CLK_1255 NC_010520.1 2055284 2055820 R identified by match to protein family HMM PF00293; match to protein family HMM TIGR00052; NUDIX family hydrolase complement(2055284..2055820) Clostridium botulinum A3 str. Loch Maree 6153252 YP_001787196.1 CDS CLK_1256 NC_010520.1 2056313 2057839 R identified by match to protein family HMM PF00324; amino acid permease complement(2056313..2057839) Clostridium botulinum A3 str. Loch Maree 6154288 YP_001787197.1 CDS CLK_1257 NC_010520.1 2058453 2058893 D hypothetical protein 2058453..2058893 Clostridium botulinum A3 str. Loch Maree 6151657 YP_001787198.1 CDS CLK_1258 NC_010520.1 2059049 2059804 R identified by match to protein family HMM PF00877; nlpC/P60 family protein complement(2059049..2059804) Clostridium botulinum A3 str. Loch Maree 6151546 YP_001787199.1 CDS CLK_1259 NC_010520.1 2061502 2062116 R identified by Glimmer3; hypothetical protein complement(2061502..2062116) Clostridium botulinum A3 str. Loch Maree 6154507 YP_001787200.1 CDS spo0A NC_010520.1 2063334 2064155 R identified by match to protein family HMM PF00072; match to protein family HMM PF08769; match to protein family HMM TIGR02875; sporulation transcription factor Spo0A complement(2063334..2064155) Clostridium botulinum A3 str. Loch Maree 6152997 YP_001787201.1 CDS spoIVB NC_010520.1 2064584 2065810 R identified by match to protein family HMM PF05580; match to protein family HMM TIGR02860; stage IV sporulation protein B complement(2064584..2065810) Clostridium botulinum A3 str. Loch Maree 6153262 YP_001787202.1 CDS metA NC_010520.1 2066232 2067128 R identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001; homoserine O-succinyltransferase complement(2066232..2067128) Clostridium botulinum A3 str. Loch Maree 6151904 YP_001787203.1 CDS hom NC_010520.1 2067155 2068381 R identified by match to protein family HMM PF00742; match to protein family HMM PF03447; homoserine dehydrogenase complement(2067155..2068381) Clostridium botulinum A3 str. Loch Maree 6151612 YP_001787204.1 CDS CLK_1266 NC_010520.1 2068421 2069701 R identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase complement(2068421..2069701) Clostridium botulinum A3 str. Loch Maree 6153039 YP_001787205.1 CDS recN NC_010520.1 2070000 2071703 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein recN complement(2070000..2071703) Clostridium botulinum A3 str. Loch Maree 6152183 YP_001787206.1 CDS argR NC_010520.1 2071716 2072168 R regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor ArgR complement(2071716..2072168) Clostridium botulinum A3 str. Loch Maree 6151679 YP_001787207.1 CDS ppnK NC_010520.1 2072170 2073015 R identified by match to protein family HMM PF01513; ATP-NAD kinase complement(2072170..2073015) Clostridium botulinum A3 str. Loch Maree 6153107 YP_001787208.1 CDS CLK_1270 NC_010520.1 2073015 2073836 R identified by match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A complement(2073015..2073836) Clostridium botulinum A3 str. Loch Maree 6154231 YP_001787209.1 CDS dxs NC_010520.1 2073858 2075726 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2073858..2075726) Clostridium botulinum A3 str. Loch Maree 6151786 YP_001787210.1 CDS CLK_1272 NC_010520.1 2075727 2076296 R hypothetical protein complement(2075727..2076296) Clostridium botulinum A3 str. Loch Maree 6153721 YP_001787211.1 CDS ispA NC_010520.1 2077099 2077971 R identified by match to protein family HMM PF00348; geranyltranstransferase complement(2077099..2077971) Clostridium botulinum A3 str. Loch Maree 6154630 YP_001787212.1 CDS xseB NC_010520.1 2078096 2078311 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2078096..2078311) Clostridium botulinum A3 str. Loch Maree 6154822 YP_001787213.1 CDS xseA NC_010520.1 2078405 2079610 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2078405..2079610) Clostridium botulinum A3 str. Loch Maree 6151867 YP_001787214.1 CDS nusB NC_010520.1 2079681 2080106 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(2079681..2080106) Clostridium botulinum A3 str. Loch Maree 6152257 YP_001787215.1 CDS asp NC_010520.1 2080245 2080640 R identified by match to protein family HMM PF03780; alkaline shock protein complement(2080245..2080640) Clostridium botulinum A3 str. Loch Maree 6153315 YP_001787216.1 CDS CLK_1278 NC_010520.1 2080722 2081246 R stage III sporulation protein AH complement(2080722..2081246) Clostridium botulinum A3 str. Loch Maree 6152765 YP_001787217.1 CDS CLK_1279 NC_010520.1 2081308 2081904 R identified by match to protein family HMM TIGR02830; stage III sporulation protein AG complement(2081308..2081904) Clostridium botulinum A3 str. Loch Maree 6154525 YP_001787218.1 CDS spoIIIAF NC_010520.1 2082043 2082633 R identified by match to protein family HMM TIGR02896; stage III sporulation protein AF complement(2082043..2082633) Clostridium botulinum A3 str. Loch Maree 6151832 YP_001787219.1 CDS CLK_1281 NC_010520.1 2082669 2083832 R identified by match to protein family HMM TIGR02829; stage III sporulation protein AE complement(2082669..2083832) Clostridium botulinum A3 str. Loch Maree 6152854 YP_001787220.1 CDS CLK_1282 NC_010520.1 2083841 2084224 R identified by match to protein family HMM TIGR02849; stage III sporulation protein AD complement(2083841..2084224) Clostridium botulinum A3 str. Loch Maree 6152911 YP_001787221.1 CDS CLK_1283 NC_010520.1 2084251 2084448 R identified by match to protein family HMM PF06686; match to protein family HMM TIGR02848; stage III sporulation protein AC complement(2084251..2084448) Clostridium botulinum A3 str. Loch Maree 6154442 YP_001787222.1 CDS CLK_1284 NC_010520.1 2084491 2085009 R necessary for complete engulfment of forespore; stage III sporulation protein SpoAB complement(2084491..2085009) Clostridium botulinum A3 str. Loch Maree 6151342 YP_001787223.1 CDS CLK_1285 NC_010520.1 2085046 2085969 R identified by match to protein family HMM TIGR02858; stage III sporulation protein AA complement(2085046..2085969) Clostridium botulinum A3 str. Loch Maree 6152355 YP_001787224.1 CDS CLK_1286 NC_010520.1 2086164 2086583 R hypothetical protein complement(2086164..2086583) Clostridium botulinum A3 str. Loch Maree 6153825 YP_001787225.1 CDS efp NC_010520.1 2086624 2087181 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2086624..2087181) Clostridium botulinum A3 str. Loch Maree 6154851 YP_001787226.1 CDS aroQ NC_010520.1 2087270 2087713 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(2087270..2087713) Clostridium botulinum A3 str. Loch Maree 6152090 YP_001787227.1 CDS aroK NC_010520.1 2087868 2088380 R identified by match to protein family HMM PF01202; shikimate kinase complement(2087868..2088380) Clostridium botulinum A3 str. Loch Maree 6152548 YP_001787228.1 CDS CLK_1290 NC_010520.1 2088514 2089008 R hypothetical protein complement(2088514..2089008) Clostridium botulinum A3 str. Loch Maree 6151673 YP_001787229.1 CDS CLK_1291 NC_010520.1 2089014 2089460 R identified by Glimmer3; hypothetical protein complement(2089014..2089460) Clostridium botulinum A3 str. Loch Maree 6152657 YP_001787230.1 CDS CLK_1292 NC_010520.1 2089476 2090165 R hypothetical protein complement(2089476..2090165) Clostridium botulinum A3 str. Loch Maree 6153640 YP_001787231.1 CDS CLK_1293 NC_010520.1 2090193 2090639 R lipoprotein complement(2090193..2090639) Clostridium botulinum A3 str. Loch Maree 6154736 YP_001787232.1 CDS CLK_1294 NC_010520.1 2090618 2091058 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; hypothetical protein complement(2090618..2091058) Clostridium botulinum A3 str. Loch Maree 6152043 YP_001787233.1 CDS CLK_1295 NC_010520.1 2091055 2091501 R identified by match to protein family HMM TIGR02532; hypothetical protein complement(2091055..2091501) Clostridium botulinum A3 str. Loch Maree 6153101 YP_001787234.1 CDS CLK_1296 NC_010520.1 2091482 2091934 R hypothetical protein complement(2091482..2091934) Clostridium botulinum A3 str. Loch Maree 6154284 YP_001787235.1 CDS CLK_1297 NC_010520.1 2092155 2092559 R identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; pilin complement(2092155..2092559) Clostridium botulinum A3 str. Loch Maree 6151478 YP_001787236.1 CDS CLK_1298 NC_010520.1 2092745 2092885 R general secretion pathway protein complement(2092745..2092885) Clostridium botulinum A3 str. Loch Maree 6154170 YP_001787237.1 CDS CLK_1299 NC_010520.1 2093080 2094789 R hypothetical protein complement(2093080..2094789) Clostridium botulinum A3 str. Loch Maree 6154367 YP_001787238.1 CDS CLK_1300 NC_010520.1 2094783 2095013 R identified by Glimmer3; hypothetical protein complement(2094783..2095013) Clostridium botulinum A3 str. Loch Maree 6153605 YP_001787239.1 CDS CLK_1301 NC_010520.1 2095019 2095681 R identified by Glimmer3; hypothetical protein complement(2095019..2095681) Clostridium botulinum A3 str. Loch Maree 6153184 YP_001787240.1 CDS CLK_1302 NC_010520.1 2095671 2095907 R identified by Glimmer3; hypothetical protein complement(2095671..2095907) Clostridium botulinum A3 str. Loch Maree 6152654 YP_001787241.1 CDS CLK_1303 NC_010520.1 2096138 2096992 R identified by Glimmer3; hypothetical protein complement(2096138..2096992) Clostridium botulinum A3 str. Loch Maree 6151591 YP_001787242.1 CDS CLK_1304 NC_010520.1 2097063 2098049 R identified by Glimmer3; hypothetical protein complement(2097063..2098049) Clostridium botulinum A3 str. Loch Maree 6153754 YP_001787243.1 CDS CLK_1305 NC_010520.1 2098037 2098240 R identified by Glimmer3; hypothetical protein complement(2098037..2098240) Clostridium botulinum A3 str. Loch Maree 6152316 YP_001787244.1 CDS CLK_1306 NC_010520.1 2098227 2099081 R identified by Glimmer3; hypothetical protein complement(2098227..2099081) Clostridium botulinum A3 str. Loch Maree 6151514 YP_001787245.1 CDS CLK_1307 NC_010520.1 2099168 2099542 R transposase C for complement(2099168..2099542) Clostridium botulinum A3 str. Loch Maree 6153943 YP_001787246.1 CDS CLK_1308 NC_010520.1 2099542 2101515 R identified by match to protein family HMM PF00589; integrase complement(2099542..2101515) Clostridium botulinum A3 str. Loch Maree 6152761 YP_001787247.1 CDS CLK_1309 NC_010520.1 2101515 2102645 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific recombinase complement(2101515..2102645) Clostridium botulinum A3 str. Loch Maree 6154715 YP_001787248.1 CDS CLK_1310 NC_010520.1 2102798 2103802 R identified by match to protein family HMM PF00482; general secretion pathway protein complement(2102798..2103802) Clostridium botulinum A3 str. Loch Maree 6152093 YP_001787249.1 CDS CLK_1311 NC_010520.1 2103947 2104681 R Type II traffic warden ATPase; Cholera toxin secretion protein EpsE; identified by match to protein family HMM PF00437; general secretion pathway protein E complement(2103947..2104681) Clostridium botulinum A3 str. Loch Maree 6152667 YP_001787250.1 CDS CLK_1312 NC_010520.1 2105343 2106218 R identified by Glimmer3; hypothetical protein complement(2105343..2106218) Clostridium botulinum A3 str. Loch Maree 6153791 YP_001787251.1 CDS CLK_1313 NC_010520.1 2106187 2107176 R identified by Glimmer3; hypothetical protein complement(2106187..2107176) Clostridium botulinum A3 str. Loch Maree 6153444 YP_001787252.1 CDS CLK_1314 NC_010520.1 2107406 2108230 R identified by match to protein family HMM PF01183; 1,4-beta-N-acetylmuramidase complement(2107406..2108230) Clostridium botulinum A3 str. Loch Maree 6154514 YP_001787253.1 CDS CLK_1315 NC_010520.1 2108270 2108689 R identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593; toxin secretion/phage lysis holin complement(2108270..2108689) Clostridium botulinum A3 str. Loch Maree 6151371 YP_001787254.1 CDS CLK_1316 NC_010520.1 2108770 2108910 R identified by Glimmer3; hypothetical protein complement(2108770..2108910) Clostridium botulinum A3 str. Loch Maree 6152373 YP_001787255.1 CDS CLK_1317 NC_010520.1 2108912 2109106 R identified by Glimmer3; hypothetical protein complement(2108912..2109106) Clostridium botulinum A3 str. Loch Maree 6153608 YP_001787256.1 CDS CLK_1318 NC_010520.1 2109126 2111795 R identified by Glimmer3; hypothetical protein complement(2109126..2111795) Clostridium botulinum A3 str. Loch Maree 6154692 YP_001787257.1 CDS CLK_1319 NC_010520.1 2111797 2113161 R hypothetical protein complement(2111797..2113161) Clostridium botulinum A3 str. Loch Maree 6153598 YP_001787258.1 CDS CLK_1320 NC_010520.1 2113177 2114859 R identified by match to protein family HMM TIGR01665; phage endopeptidase complement(2113177..2114859) Clostridium botulinum A3 str. Loch Maree 6154481 YP_001787259.1 CDS CLK_1321 NC_010520.1 2114844 2115521 R identified by match to protein family HMM TIGR01633; phage tail protein complement(2114844..2115521) Clostridium botulinum A3 str. Loch Maree 6151421 YP_001787260.1 CDS CLK_1322 NC_010520.1 2115521 2118190 R identified by match to protein family HMM TIGR01760; phage protein complement(2115521..2118190) Clostridium botulinum A3 str. Loch Maree 6152361 YP_001787261.1 CDS CLK_1323 NC_010520.1 2118240 2118392 R identified by Glimmer3; hypothetical protein complement(2118240..2118392) Clostridium botulinum A3 str. Loch Maree 6153946 YP_001787262.1 CDS CLK_1324 NC_010520.1 2118422 2118907 R identified by Glimmer3; hypothetical protein complement(2118422..2118907) Clostridium botulinum A3 str. Loch Maree 6154904 YP_001787263.1 CDS CLK_1325 NC_010520.1 2118964 2119557 R similar to protein gp15 from Bacteriophage A118; protein gp15 complement(2118964..2119557) Clostridium botulinum A3 str. Loch Maree 6153051 YP_001787264.1 CDS CLK_1326 NC_010520.1 2119557 2119901 R hypothetical protein complement(2119557..2119901) Clostridium botulinum A3 str. Loch Maree 6152189 YP_001787265.1 CDS CLK_1327 NC_010520.1 2119901 2120410 R identified by Glimmer3; hypothetical protein complement(2119901..2120410) Clostridium botulinum A3 str. Loch Maree 6154452 YP_001787266.1 CDS CLK_1328 NC_010520.1 2120411 2120845 R identified by Glimmer3; hypothetical protein complement(2120411..2120845) Clostridium botulinum A3 str. Loch Maree 6153933 YP_001787267.1 CDS CLK_1329 NC_010520.1 2120842 2121186 R identified by Glimmer3; hypothetical protein complement(2120842..2121186) Clostridium botulinum A3 str. Loch Maree 6151958 YP_001787268.1 CDS CLK_1330 NC_010520.1 2121186 2121596 R identified by Glimmer3; hypothetical protein complement(2121186..2121596) Clostridium botulinum A3 str. Loch Maree 6152269 YP_001787269.1 CDS CLK_1331 NC_010520.1 2121598 2121858 R hypothetical protein complement(2121598..2121858) Clostridium botulinum A3 str. Loch Maree 6153633 YP_001787270.1 CDS CLK_1332 NC_010520.1 2121904 2122875 R prophage LambdaCh01, coat protein complement(2121904..2122875) Clostridium botulinum A3 str. Loch Maree 6154892 YP_001787271.1 CDS CLK_1333 NC_010520.1 2122895 2123527 R hypothetical protein complement(2122895..2123527) Clostridium botulinum A3 str. Loch Maree 6152277 YP_001787272.1 CDS CLK_1334 NC_010520.1 2123796 2124404 R identified by Glimmer3; hypothetical protein complement(2123796..2124404) Clostridium botulinum A3 str. Loch Maree 6152778 YP_001787273.1 CDS CLK_1335 NC_010520.1 2124613 2125335 R hypothetical protein complement(2124613..2125335) Clostridium botulinum A3 str. Loch Maree 6154082 YP_001787274.1 CDS CLK_1336 NC_010520.1 2125335 2126603 R identified by match to protein family HMM PF05133; match to protein family HMM TIGR01538; SPP1 family phage portal protein complement(2125335..2126603) Clostridium botulinum A3 str. Loch Maree 6154298 YP_001787275.1 CDS CLK_1337 NC_010520.1 2126607 2128403 R hypothetical protein complement(2126607..2128403) Clostridium botulinum A3 str. Loch Maree 6153083 YP_001787276.1 CDS CLK_1338 NC_010520.1 2128486 2129529 R identified by Glimmer3; hypothetical protein complement(2128486..2129529) Clostridium botulinum A3 str. Loch Maree 6152684 YP_001787277.1 CDS CLK_1339 NC_010520.1 2129616 2130278 R identified by match to protein family HMM PF00239; resolvase complement(2129616..2130278) Clostridium botulinum A3 str. Loch Maree 6151580 YP_001787278.1 CDS CLK_1340 NC_010520.1 2130525 2130938 R identified by match to protein family HMM PF02796; DNA-binding protein complement(2130525..2130938) Clostridium botulinum A3 str. Loch Maree 6152148 YP_001787279.1 CDS CLK_1341 NC_010520.1 2131101 2131544 R hypothetical protein complement(2131101..2131544) Clostridium botulinum A3 str. Loch Maree 6152731 YP_001787280.1 CDS CLK_1342 NC_010520.1 2131832 2134423 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; DNA primase related protein complement(2131832..2134423) Clostridium botulinum A3 str. Loch Maree 6153221 YP_001787281.1 CDS CLK_1343 NC_010520.1 2134453 2135037 R hypothetical protein complement(2134453..2135037) Clostridium botulinum A3 str. Loch Maree 6154870 YP_001787282.1 CDS CLK_1344 NC_010520.1 2135085 2135210 R threonyl-tRNA synthetase complement(2135085..2135210) Clostridium botulinum A3 str. Loch Maree 6151602 YP_001787283.1 CDS CLK_1345 NC_010520.1 2135239 2135556 R identified by Glimmer3; hypothetical protein complement(2135239..2135556) Clostridium botulinum A3 str. Loch Maree 6152309 YP_001787284.1 CDS CLK_1346 NC_010520.1 2135616 2135732 R identified by Glimmer3; hypothetical protein complement(2135616..2135732) Clostridium botulinum A3 str. Loch Maree 6153248 YP_001787285.1 CDS CLK_1347 NC_010520.1 2135788 2135940 R hypothetical protein complement(2135788..2135940) Clostridium botulinum A3 str. Loch Maree 6154523 YP_001787286.1 CDS CLK_1348 NC_010520.1 2135970 2136494 R sugar-phospahte nucleotidyltransferase complement(2135970..2136494) Clostridium botulinum A3 str. Loch Maree 6151662 YP_001787287.1 CDS CLK_1349 NC_010520.1 2136561 2136971 R identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein family complement(2136561..2136971) Clostridium botulinum A3 str. Loch Maree 6152878 YP_001787288.1 CDS CLK_1350 NC_010520.1 2136975 2137601 R hypothetical protein complement(2136975..2137601) Clostridium botulinum A3 str. Loch Maree 6153462 YP_001787289.1 CDS CLK_1351 NC_010520.1 2137615 2138328 R hypothetical protein complement(2137615..2138328) Clostridium botulinum A3 str. Loch Maree 6154469 YP_001787290.1 CDS CLK_1352 NC_010520.1 2138328 2139248 R identified by match to protein family HMM PF03837; match to protein family HMM TIGR00616; RecT family protein complement(2138328..2139248) Clostridium botulinum A3 str. Loch Maree 6151541 YP_001787291.1 CDS CLK_1353 NC_010520.1 2139250 2141187 R hypothetical protein complement(2139250..2141187) Clostridium botulinum A3 str. Loch Maree 6152125 YP_001787292.1 CDS CLK_1354 NC_010520.1 2141190 2141342 R identified by Glimmer3; hypothetical protein complement(2141190..2141342) Clostridium botulinum A3 str. Loch Maree 6152486 YP_001787293.1 CDS CLK_1355 NC_010520.1 2141351 2141683 R hypothetical protein complement(2141351..2141683) Clostridium botulinum A3 str. Loch Maree 6153794 YP_001787294.1 CDS CLK_1356 NC_010520.1 2141733 2142002 R hypothetical protein complement(2141733..2142002) Clostridium botulinum A3 str. Loch Maree 6152950 YP_001787295.1 CDS CLK_1357 NC_010520.1 2142019 2142189 R hypothetical protein complement(2142019..2142189) Clostridium botulinum A3 str. Loch Maree 6153301 YP_001787296.1 CDS CLK_1358 NC_010520.1 2142203 2142496 R hypothetical protein complement(2142203..2142496) Clostridium botulinum A3 str. Loch Maree 6154219 YP_001787297.1 CDS CLK_1359 NC_010520.1 2142516 2143274 R identified by Glimmer3; hypothetical protein complement(2142516..2143274) Clostridium botulinum A3 str. Loch Maree 6154356 YP_001787298.1 CDS CLK_1360 NC_010520.1 2143306 2143518 R transcriptional regulator complement(2143306..2143518) Clostridium botulinum A3 str. Loch Maree 6151891 YP_001787299.1 CDS CLK_1361 NC_010520.1 2143755 2144357 D identified by match to protein family HMM PF01381; transcriptional regulator 2143755..2144357 Clostridium botulinum A3 str. Loch Maree 6153153 YP_001787300.1 CDS CLK_1362 NC_010520.1 2144407 2144823 D identified by match to protein family HMM PF06114; hypothetical protein 2144407..2144823 Clostridium botulinum A3 str. Loch Maree 6153972 YP_001787301.1 CDS CLK_1363 NC_010520.1 2145382 2146455 D identified by match to protein family HMM PF00589; phage integrase site specific recombinase 2145382..2146455 Clostridium botulinum A3 str. Loch Maree 6153366 YP_001787302.1 CDS CLK_1364 NC_010520.1 2146500 2147222 R identified by match to protein family HMM PF05157; general secretion pathway protein complement(2146500..2147222) Clostridium botulinum A3 str. Loch Maree 6154203 YP_001787303.1 CDS CLK_1365 NC_010520.1 2147371 2147499 R identified by Glimmer3; hypothetical protein complement(2147371..2147499) Clostridium botulinum A3 str. Loch Maree 6151388 YP_001787304.1 CDS CLK_1366 NC_010520.1 2147595 2148668 R lipoprotein complement(2147595..2148668) Clostridium botulinum A3 str. Loch Maree 6154552 YP_001787305.1 CDS dapF NC_010520.1 2148669 2149490 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(2148669..2149490) Clostridium botulinum A3 str. Loch Maree 6151345 YP_001787306.1 CDS CLK_1368 NC_010520.1 2149744 2151474 D identified by match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin-binding protein 2149744..2151474 Clostridium botulinum A3 str. Loch Maree 6152831 YP_001787307.1 CDS truA NC_010520.1 2151543 2152283 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2151543..2152283 Clostridium botulinum A3 str. Loch Maree 6152446 YP_001787308.1 CDS CLK_1370 NC_010520.1 2152611 2152838 R identified by Glimmer3; hypothetical protein complement(2152611..2152838) Clostridium botulinum A3 str. Loch Maree 6153509 YP_001787309.1 CDS CLK_1371 NC_010520.1 2152873 2153250 R identified by match to protein family HMM PF01230; HIT family protein complement(2152873..2153250) Clostridium botulinum A3 str. Loch Maree 6154533 YP_001787310.1 CDS CLK_1372 NC_010520.1 2153761 2155164 D identified by match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 2153761..2155164 Clostridium botulinum A3 str. Loch Maree 6152227 YP_001787311.1 CDS CLK_1373 NC_010520.1 2155475 2155816 R identified by Glimmer3; hypothetical protein complement(2155475..2155816) Clostridium botulinum A3 str. Loch Maree 6151404 YP_001787312.1 CDS CLK_1374 NC_010520.1 2156321 2158030 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2156321..2158030) Clostridium botulinum A3 str. Loch Maree 6153855 YP_001787313.1 CDS cloSI NC_010520.1 2158500 2160074 R identified by match to protein family HMM PF03415; match to protein family HMM TIGR02806; clostripain complement(2158500..2160074) Clostridium botulinum A3 str. Loch Maree 6154677 YP_001787314.1 CDS CLK_1376 NC_010520.1 2160554 2161210 D hypothetical protein 2160554..2161210 Clostridium botulinum A3 str. Loch Maree 6153035 YP_001787315.1 CDS CLK_1377 NC_010520.1 2161212 2161913 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2161212..2161913 Clostridium botulinum A3 str. Loch Maree 6151900 YP_001787316.1 CDS CLK_1378 NC_010520.1 2161903 2163813 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2161903..2163813 Clostridium botulinum A3 str. Loch Maree 6153268 YP_001787317.1 CDS msrA NC_010520.1 2164236 2164709 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(2164236..2164709) Clostridium botulinum A3 str. Loch Maree 6154313 YP_001787318.1 CDS CLK_1380 NC_010520.1 2165089 2165880 D identified by match to protein family HMM PF00072; response regulator 2165089..2165880 Clostridium botulinum A3 str. Loch Maree 6152574 YP_001787319.1 CDS CLK_1381 NC_010520.1 2166040 2167500 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2166040..2167500) Clostridium botulinum A3 str. Loch Maree 6151759 YP_001787320.1 CDS CLK_1382 NC_010520.1 2167497 2168186 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2167497..2168186) Clostridium botulinum A3 str. Loch Maree 6152061 YP_001787321.1 CDS CLK_1383 NC_010520.1 2168469 2169245 R hypothetical protein complement(2168469..2169245) Clostridium botulinum A3 str. Loch Maree 6154900 YP_001787322.1 CDS CLK_1384 NC_010520.1 2169401 2170252 R ABC transporter permease complement(2169401..2170252) Clostridium botulinum A3 str. Loch Maree 6154093 YP_001787323.1 CDS CLK_1385 NC_010520.1 2170252 2170995 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2170252..2170995) Clostridium botulinum A3 str. Loch Maree 6152366 YP_001787324.1 CDS CLK_1386 NC_010520.1 2170955 2171128 D identified by Glimmer3; hypothetical protein 2170955..2171128 Clostridium botulinum A3 str. Loch Maree 6154449 YP_001787325.1 CDS CLK_1387 NC_010520.1 2171584 2173446 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2171584..2173446) Clostridium botulinum A3 str. Loch Maree 6152798 YP_001787326.1 CDS CLK_1388 NC_010520.1 2173443 2175743 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2173443..2175743) Clostridium botulinum A3 str. Loch Maree 6151955 YP_001787327.1 CDS CLK_1389 NC_010520.1 2176159 2176602 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2176159..2176602 Clostridium botulinum A3 str. Loch Maree 6154627 YP_001787328.1 CDS bltD NC_010520.1 2176714 2177154 D identified by match to protein family HMM PF00583; spermine/spermidine acetyltransferase 2176714..2177154 Clostridium botulinum A3 str. Loch Maree 6151374 YP_001787329.1 CDS moeB NC_010520.1 2177386 2178069 R identified by match to protein family HMM PF00899; molybdopterin biosynthesis protein MoeB complement(2177386..2178069) Clostridium botulinum A3 str. Loch Maree 6152392 YP_001787330.1 CDS moaD NC_010520.1 2178071 2178298 R identified by match to protein family HMM PF02597; molybdopterin converting factor subunit 1 complement(2178071..2178298) Clostridium botulinum A3 str. Loch Maree 6154295 YP_001787331.1 CDS aor NC_010520.1 2178681 2180498 R identified by match to protein family HMM PF01314; match to protein family HMM PF02730; aldehyde ferredoxin oxidoreductase complement(2178681..2180498) Clostridium botulinum A3 str. Loch Maree 6151578 YP_001787332.1 CDS aorR NC_010520.1 2180905 2182800 R identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR00229; aor transcriptional regulator complement(2180905..2182800) Clostridium botulinum A3 str. Loch Maree 6152700 YP_001787333.1 CDS CLK_1395 NC_010520.1 2182849 2183289 R identified by match to protein family HMM PF03473; MOSC domain-containing protein complement(2182849..2183289) Clostridium botulinum A3 str. Loch Maree 6152811 YP_001787334.1 CDS moaC NC_010520.1 2183291 2183770 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(2183291..2183770) Clostridium botulinum A3 str. Loch Maree 6152695 YP_001787335.1 CDS moaA NC_010520.1 2183774 2184733 R identified by match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666; molybdenum cofactor biosynthesis protein A complement(2183774..2184733) Clostridium botulinum A3 str. Loch Maree 6151638 YP_001787336.1 CDS CLK_1398 NC_010520.1 2184792 2186696 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; LysR family transcriptional regulator complement(2184792..2186696) Clostridium botulinum A3 str. Loch Maree 6153658 YP_001787337.1 CDS moeA NC_010520.1 2186708 2187934 R identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis enzyme MoeA complement(2186708..2187934) Clostridium botulinum A3 str. Loch Maree 6152281 YP_001787338.1 CDS mog NC_010520.1 2187958 2188446 R identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdopterin biosynthesis enzyme Mog complement(2187958..2188446) Clostridium botulinum A3 str. Loch Maree 6153937 YP_001787339.1 CDS tupC NC_010520.1 2188654 2189346 R identified by match to protein family HMM PF00005; tungstate ABC transporter ATP-binding protein complement(2188654..2189346) Clostridium botulinum A3 str. Loch Maree 6154971 YP_001787340.1 CDS tupB NC_010520.1 2189343 2190014 R identified by match to protein family HMM PF00528; tungstate ABC transporter permease complement(2189343..2190014) Clostridium botulinum A3 str. Loch Maree 6151885 YP_001787341.1 CDS CLK_1403 NC_010520.1 2190023 2190874 R identified by match to protein family HMM PF01547; tungstate ABC transporter tungstate-binding protein complement(2190023..2190874) Clostridium botulinum A3 str. Loch Maree 6154382 YP_001787342.1 CDS CLK_1404 NC_010520.1 2191093 2192415 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2191093..2192415) Clostridium botulinum A3 str. Loch Maree 6154706 YP_001787343.1 CDS CLK_1405 NC_010520.1 2192408 2192611 R identified by Glimmer3; hypothetical protein complement(2192408..2192611) Clostridium botulinum A3 str. Loch Maree 6151810 YP_001787344.1 CDS CLK_1406 NC_010520.1 2192852 2193496 R identified by match to protein family HMM PF09335; hypothetical protein complement(2192852..2193496) Clostridium botulinum A3 str. Loch Maree 6153049 YP_001787345.1 CDS CLK_1407 NC_010520.1 2193819 2194490 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2193819..2194490) Clostridium botulinum A3 str. Loch Maree 6153355 YP_001787346.1 CDS CLK_1408 NC_010520.1 2194505 2195965 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2194505..2195965) Clostridium botulinum A3 str. Loch Maree 6154141 YP_001787347.1 CDS CLK_1410 NC_010520.1 2196302 2196460 D identified by Glimmer3; hypothetical protein 2196302..2196460 Clostridium botulinum A3 str. Loch Maree 6154130 YP_001787348.1 CDS CLK_1409 NC_010520.1 2196413 2196538 R non-heme chloroperoxidase complement(2196413..2196538) Clostridium botulinum A3 str. Loch Maree 6153970 YP_001787349.1 CDS CLK_1411 NC_010520.1 2196809 2198566 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2196809..2198566) Clostridium botulinum A3 str. Loch Maree 6154947 YP_001787350.1 CDS CLK_1412 NC_010520.1 2198563 2200293 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2198563..2200293) Clostridium botulinum A3 str. Loch Maree 6152937 YP_001787351.1 CDS CLK_1413 NC_010520.1 2200408 2201229 D identified by match to protein family HMM PF00376; ABC transporter 2200408..2201229 Clostridium botulinum A3 str. Loch Maree 6151627 YP_001787352.1 CDS CLK_1414 NC_010520.1 2201632 2202258 D identified by match to protein family HMM PF03358; NADPH-dependent FMN reductase 2201632..2202258 Clostridium botulinum A3 str. Loch Maree 6154618 YP_001787353.1 CDS CLK_1415 NC_010520.1 2203612 2204610 D identified by match to protein family HMM PF00560; internalin 2203612..2204610 Clostridium botulinum A3 str. Loch Maree 6153279 YP_001787354.1 CDS CLK_1416 NC_010520.1 2204632 2206680 D identified by match to protein family HMM PF02839; match to protein family HMM TIGR03296; carbohydrate binding protein 2204632..2206680 Clostridium botulinum A3 str. Loch Maree 6152368 YP_001787355.1 CDS CLK_1417 NC_010520.1 2206945 2209581 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting ATPase PacL complement(2206945..2209581) Clostridium botulinum A3 str. Loch Maree 6153015 YP_001787356.1 CDS CLK_1418 NC_010520.1 2209793 2210383 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2209793..2210383 Clostridium botulinum A3 str. Loch Maree 6152230 YP_001787357.1 CDS CLK_1419 NC_010520.1 2210655 2210792 D identified by Glimmer3; hypothetical protein 2210655..2210792 Clostridium botulinum A3 str. Loch Maree 6154147 YP_001787358.1 CDS CLK_1420 NC_010520.1 2210963 2211958 D identified by match to protein family HMM PF00560; internalin 2210963..2211958 Clostridium botulinum A3 str. Loch Maree 6153371 YP_001787359.1 CDS CLK_1421 NC_010520.1 2211979 2214198 D identified by match to protein family HMM TIGR03296; hypothetical protein 2211979..2214198 Clostridium botulinum A3 str. Loch Maree 6152407 YP_001787360.1 CDS CLK_1422 NC_010520.1 2214403 2215842 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2214403..2215842) Clostridium botulinum A3 str. Loch Maree 6151372 YP_001787361.1 CDS CLK_1423 NC_010520.1 2215832 2216497 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2215832..2216497) Clostridium botulinum A3 str. Loch Maree 6152448 YP_001787362.1 CDS CLK_1424 NC_010520.1 2216811 2217626 R identified by match to protein family HMM PF02596; hypothetical protein complement(2216811..2217626) Clostridium botulinum A3 str. Loch Maree 6151413 YP_001787363.1 CDS CLK_1425 NC_010520.1 2217652 2218407 R identified by match to protein family HMM PF02361; ABC transporter permease complement(2217652..2218407) Clostridium botulinum A3 str. Loch Maree 6154913 YP_001787364.1 CDS CLK_1426 NC_010520.1 2218423 2219856 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2218423..2219856) Clostridium botulinum A3 str. Loch Maree 6153885 YP_001787365.1 CDS CLK_1427 NC_010520.1 2219859 2220425 R ABC transporter permease complement(2219859..2220425) Clostridium botulinum A3 str. Loch Maree 6152897 YP_001787366.1 CDS CLK_1428 NC_010520.1 2220586 2221653 R identified by match to protein family HMM PF01168; alanine racemase complement(2220586..2221653) Clostridium botulinum A3 str. Loch Maree 6151808 YP_001787367.1 CDS CLK_1429 NC_010520.1 2221832 2223334 D identified by match to protein family HMM PF03323; spore germination protein 2221832..2223334 Clostridium botulinum A3 str. Loch Maree 6151845 YP_001787368.1 CDS CLK_1430 NC_010520.1 2223324 2224412 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2223324..2224412 Clostridium botulinum A3 str. Loch Maree 6152742 YP_001787369.1 CDS CLK_1431 NC_010520.1 2224402 2225514 D identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; Ger(x)C family germination protein 2224402..2225514 Clostridium botulinum A3 str. Loch Maree 6151993 YP_001787370.1 CDS CLK_1432 NC_010520.1 2225556 2226665 D identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein 2225556..2226665 Clostridium botulinum A3 str. Loch Maree 6152813 YP_001787371.1 CDS CLK_1433 NC_010520.1 2226693 2227121 R identified by match to protein family HMM TIGR01909; hypothetical protein complement(2226693..2227121) Clostridium botulinum A3 str. Loch Maree 6154075 YP_001787372.1 CDS pcaC NC_010520.1 2227416 2227748 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; 4-carboxymuconolactone decarboxylase 2227416..2227748 Clostridium botulinum A3 str. Loch Maree 6154885 YP_001787373.1 CDS CLK_1435 NC_010520.1 2227761 2228741 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2227761..2228741 Clostridium botulinum A3 str. Loch Maree 6151513 YP_001787374.1 CDS CLK_1436 NC_010520.1 2228922 2229677 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 2228922..2229677 Clostridium botulinum A3 str. Loch Maree 6152335 YP_001787375.1 CDS CLK_1437 NC_010520.1 2229895 2231325 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(2229895..2231325) Clostridium botulinum A3 str. Loch Maree 6153596 YP_001787376.1 CDS hsp90 NC_010520.1 2231948 2233828 R molecular chaperone; heat shock protein 90 complement(2231948..2233828) Clostridium botulinum A3 str. Loch Maree 6151973 YP_001787377.1 CDS CLK_1439 NC_010520.1 2234365 2235930 D identified by match to protein family HMM PF00488; MutS domain-containing protein 2234365..2235930 Clostridium botulinum A3 str. Loch Maree 6154281 YP_001787378.1 CDS treP NC_010520.1 2236411 2237838 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR01992; PTS system, trehalose-specific IIBC component 2236411..2237838 Clostridium botulinum A3 str. Loch Maree 6153288 YP_001787379.1 CDS treC NC_010520.1 2238156 2239823 D identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403; alpha,alpha-phosphotrehalase 2238156..2239823 Clostridium botulinum A3 str. Loch Maree 6152508 YP_001787380.1 CDS treR NC_010520.1 2239856 2240566 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; match to protein family HMM TIGR02404; trehalose operon repressor 2239856..2240566 Clostridium botulinum A3 str. Loch Maree 6151918 YP_001787381.1 CDS CLK_1443 NC_010520.1 2240927 2241367 R identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose family transporter subunit IIA complement(2240927..2241367) Clostridium botulinum A3 str. Loch Maree 6153956 YP_001787382.1 CDS CLK_1444 NC_010520.1 2241640 2243037 R identified by match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR01427; PTS system fructose family transporter subunit IIBC complement(2241640..2243037) Clostridium botulinum A3 str. Loch Maree 6153132 YP_001787383.1 CDS CLK_1445 NC_010520.1 2243038 2243961 R identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; PfkB family kinase complement(2243038..2243961) Clostridium botulinum A3 str. Loch Maree 6154122 YP_001787384.1 CDS gatY NC_010520.1 2243981 2244841 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase complement(2243981..2244841) Clostridium botulinum A3 str. Loch Maree 6153312 YP_001787385.1 CDS CLK_1447 NC_010520.1 2245041 2245778 R identified by match to protein family HMM PF01380; match to protein family HMM PF01418; transcriptional regulator complement(2245041..2245778) Clostridium botulinum A3 str. Loch Maree 6153392 YP_001787386.1 CDS CLK_1448 NC_010520.1 2245862 2246269 R hypothetical protein complement(2245862..2246269) Clostridium botulinum A3 str. Loch Maree 6152581 YP_001787387.1 CDS CLK_1449 NC_010520.1 2246631 2247026 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP 2246631..2247026 Clostridium botulinum A3 str. Loch Maree 6151769 YP_001787388.1 CDS CLK_1450 NC_010520.1 2247343 2248212 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2247343..2248212) Clostridium botulinum A3 str. Loch Maree 6154641 YP_001787389.1 CDS CLK_1451 NC_010520.1 2248619 2249644 R identified by match to protein family HMM PF07859; alpha/beta hydrolase complement(2248619..2249644) Clostridium botulinum A3 str. Loch Maree 6152733 YP_001787390.1 CDS gldA NC_010520.1 2250296 2251387 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2250296..2251387 Clostridium botulinum A3 str. Loch Maree 6151913 YP_001787391.1 CDS CLK_1453 NC_010520.1 2251635 2251748 R identified by Glimmer3; hypothetical protein complement(2251635..2251748) Clostridium botulinum A3 str. Loch Maree 6154808 YP_001787392.1 CDS CLK_1454 NC_010520.1 2251878 2253527 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(2251878..2253527) Clostridium botulinum A3 str. Loch Maree 6154204 YP_001787393.1 CDS CLK_1455 NC_010520.1 2253521 2253634 R identified by Glimmer3; hypothetical protein complement(2253521..2253634) Clostridium botulinum A3 str. Loch Maree 6152334 YP_001787394.1 CDS CLK_1456 NC_010520.1 2253699 2254760 R identified by match to protein family HMM PF01168; alanine racemase complement(2253699..2254760) Clostridium botulinum A3 str. Loch Maree 6151620 YP_001787395.1 CDS CLK_1457 NC_010520.1 2255116 2255394 R hypothetical protein complement(2255116..2255394) Clostridium botulinum A3 str. Loch Maree 6154561 YP_001787396.1 CDS CLK_1458 NC_010520.1 2255865 2256929 D identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase 2255865..2256929 Clostridium botulinum A3 str. Loch Maree 6153744 YP_001787397.1 CDS CLK_1459 NC_010520.1 2257175 2257720 R Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase complement(2257175..2257720) Clostridium botulinum A3 str. Loch Maree 6151503 YP_001787398.1 CDS CLK_1460 NC_010520.1 2257736 2258800 R identified by match to protein family HMM PF00860; xanthine/uracil permease complement(2257736..2258800) Clostridium botulinum A3 str. Loch Maree 6152283 YP_001787399.1 CDS CLK_1461 NC_010520.1 2259164 2259712 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(2259164..2259712) Clostridium botulinum A3 str. Loch Maree 6154069 YP_001787400.1 CDS CLK_1462 NC_010520.1 2259944 2261248 R identified by match to protein family HMM PF06354; hypothetical protein complement(2259944..2261248) Clostridium botulinum A3 str. Loch Maree 6154832 YP_001787401.1 CDS CLK_1463 NC_010520.1 2261508 2263283 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(2261508..2263283) Clostridium botulinum A3 str. Loch Maree 6153470 YP_001787402.1 CDS CLK_1464 NC_010520.1 2263759 2264889 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 2263759..2264889 Clostridium botulinum A3 str. Loch Maree 6151915 YP_001787403.1 CDS CLK_1465 NC_010520.1 2265209 2266006 D identified by match to protein family HMM PF00188; match to protein family HMM TIGR02909; SCP-like extracellular protein 2265209..2266006 Clostridium botulinum A3 str. Loch Maree 6151490 YP_001787404.1 CDS CLK_1466 NC_010520.1 2266060 2267406 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2266060..2267406) Clostridium botulinum A3 str. Loch Maree 6152254 YP_001787405.1 CDS CLK_1467 NC_010520.1 2267555 2268463 D identified by match to protein family HMM PF00892; hypothetical protein 2267555..2268463 Clostridium botulinum A3 str. Loch Maree 6154928 YP_001787406.1 CDS aspB NC_010520.1 2268683 2269834 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2268683..2269834) Clostridium botulinum A3 str. Loch Maree 6152046 YP_001787407.1 CDS CLK_1469 NC_010520.1 2269854 2270576 R identified by match to protein family HMM PF00005; polar amino acid ABC transporter ATP-binding protein complement(2269854..2270576) Clostridium botulinum A3 str. Loch Maree 6152310 YP_001787408.1 CDS CLK_1470 NC_010520.1 2270563 2271249 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease complement(2270563..2271249) Clostridium botulinum A3 str. Loch Maree 6151520 YP_001787409.1 CDS CLK_1471 NC_010520.1 2271396 2272214 R identified by match to protein family HMM PF00497; polar amino acid ABC transporter amino acid-binding protein complement(2271396..2272214) Clostridium botulinum A3 str. Loch Maree 6153013 YP_001787410.1 CDS CLK_1472 NC_010520.1 2272306 2273580 R hypothetical protein complement(2272306..2273580) Clostridium botulinum A3 str. Loch Maree 6151362 YP_001787411.1 CDS CLK_1473 NC_010520.1 2273944 2275083 R identified by match to protein family HMM PF00266; class V aminotransferase complement(2273944..2275083) Clostridium botulinum A3 str. Loch Maree 6154672 YP_001787412.1 CDS CLK_1474 NC_010520.1 2275298 2275963 R identified by match to protein family HMM PF00302; chloramphenicol O-acetyltransferase complement(2275298..2275963) Clostridium botulinum A3 str. Loch Maree 6153960 YP_001787413.1 CDS CLK_1475 NC_010520.1 2276269 2276523 R hypothetical protein complement(2276269..2276523) Clostridium botulinum A3 str. Loch Maree 6152852 YP_001787414.1 CDS CLK_1476 NC_010520.1 2276858 2277070 R hypothetical protein complement(2276858..2277070) Clostridium botulinum A3 str. Loch Maree 6151817 YP_001787415.1 CDS CLK_1477 NC_010520.1 2277367 2277588 R hypothetical protein complement(2277367..2277588) Clostridium botulinum A3 str. Loch Maree 6151684 YP_001787416.1 CDS CLK_1478 NC_010520.1 2277800 2278417 R hypothetical protein complement(2277800..2278417) Clostridium botulinum A3 str. Loch Maree 6154549 YP_001787417.1 CDS CLK_1479 NC_010520.1 2278610 2279191 R identified by match to protein family HMM PF00440; regulatory protein BetI complement(2278610..2279191) Clostridium botulinum A3 str. Loch Maree 6154924 YP_001787418.1 CDS CLK_1480 NC_010520.1 2280026 2282521 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; magnesium transport P-type atpase complement(2280026..2282521) Clostridium botulinum A3 str. Loch Maree 6152069 YP_001787419.1 CDS CLK_1481 NC_010520.1 2282777 2283430 D identified by match to protein family HMM PF01381; match to protein family HMM PF06803; transcriptional regulator 2282777..2283430 Clostridium botulinum A3 str. Loch Maree 6151532 YP_001787420.1 CDS CLK_1482 NC_010520.1 2283779 2285134 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; proton-dependent oligopeptide transporter complement(2283779..2285134) Clostridium botulinum A3 str. Loch Maree 6152313 YP_001787421.1 CDS CLK_1483 NC_010520.1 2285474 2286823 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter complement(2285474..2286823) Clostridium botulinum A3 str. Loch Maree 6151441 YP_001787422.1 CDS pepQ NC_010520.1 2287333 2288421 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; proline dipeptidase 2287333..2288421 Clostridium botulinum A3 str. Loch Maree 6152416 YP_001787423.1 CDS pepIP NC_010520.1 2288503 2289384 D identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250; proline iminopeptidase 2288503..2289384 Clostridium botulinum A3 str. Loch Maree 6153486 YP_001787424.1 CDS CLK_1486 NC_010520.1 2289532 2289657 R identified by Glimmer3; hypothetical protein complement(2289532..2289657) Clostridium botulinum A3 str. Loch Maree 6154511 YP_001787425.1 CDS CLK_1487 NC_010520.1 2289674 2291167 R identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein complement(2289674..2291167) Clostridium botulinum A3 str. Loch Maree 6151796 YP_001787426.1 CDS CLK_1488 NC_010520.1 2291566 2292498 R identified by match to protein family HMM PF08902; hypothetical protein complement(2291566..2292498) Clostridium botulinum A3 str. Loch Maree 6153045 YP_001787427.1 CDS CLK_1489 NC_010520.1 2292595 2293989 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2292595..2293989) Clostridium botulinum A3 str. Loch Maree 6153740 YP_001787428.1 CDS CLK_1490 NC_010520.1 2294107 2294886 D identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 2294107..2294886 Clostridium botulinum A3 str. Loch Maree 6154578 YP_001787429.1 CDS CLK_1491 NC_010520.1 2294972 2295262 D endoribonuclease L-PSP 2294972..2295262 Clostridium botulinum A3 str. Loch Maree 6153812 YP_001787430.1 CDS CLK_1492 NC_010520.1 2295284 2295406 R identified by Glimmer3; hypothetical protein complement(2295284..2295406) Clostridium botulinum A3 str. Loch Maree 6154929 YP_001787431.1 CDS CLK_1493 NC_010520.1 2295591 2296238 R identified by Glimmer3; hypothetical protein complement(2295591..2296238) Clostridium botulinum A3 str. Loch Maree 6152013 YP_001787432.1 CDS CLK_1494 NC_010520.1 2296461 2298938 R thrombospondin type 3 repeat-containing protein complement(2296461..2298938) Clostridium botulinum A3 str. Loch Maree 6152363 YP_001787433.1 CDS CLK_1495 NC_010520.1 2299353 2299853 R identified by match to protein family HMM PF00881; nitroreductase complement(2299353..2299853) Clostridium botulinum A3 str. Loch Maree 6153196 YP_001787434.1 CDS CLK_1496 NC_010520.1 2299957 2301900 R identified by Glimmer3; hypothetical protein complement(2299957..2301900) Clostridium botulinum A3 str. Loch Maree 6154470 YP_001787435.1 CDS CLK_1497 NC_010520.1 2301915 2303150 R identified by Glimmer3; hypothetical protein complement(2301915..2303150) Clostridium botulinum A3 str. Loch Maree 6151649 YP_001787436.1 CDS CLK_1498 NC_010520.1 2303147 2305258 R hypothetical protein complement(2303147..2305258) Clostridium botulinum A3 str. Loch Maree 6153846 YP_001787437.1 CDS CLK_1499 NC_010520.1 2305380 2307173 R in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; hypothetical protein complement(2305380..2307173) Clostridium botulinum A3 str. Loch Maree 6153150 YP_001787438.1 CDS CLK_1500 NC_010520.1 2307478 2308047 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2307478..2308047) Clostridium botulinum A3 str. Loch Maree 6153787 YP_003264528.1 CDS CLK_1501 NC_010520.1 2308209 2308670 R hypothetical protein complement(2308209..2308670) Clostridium botulinum A3 str. Loch Maree 6154586 YP_001787439.1 CDS CLK_1502 NC_010520.1 2308781 2308945 R hypothetical protein complement(2308781..2308945) Clostridium botulinum A3 str. Loch Maree 6153778 YP_001787440.1 CDS CLK_1503 NC_010520.1 2309265 2309495 R bifunctional phosphonoacetaldehyde hydrolase/aminoethylphosphonatetransaminase complement(2309265..2309495) Clostridium botulinum A3 str. Loch Maree 6154680 YP_001787441.1 CDS CLK_1504 NC_010520.1 2309754 2310485 R 2-aminoethylphosphonate aminotransferase; aep transaminase; aept; 2-aminoethylphosphonate--pyruvate transaminase complement(2309754..2310485) Clostridium botulinum A3 str. Loch Maree 6152650 YP_001787442.1 CDS CLK_1505 NC_010520.1 2310496 2311107 R hypothetical protein complement(2310496..2311107) Clostridium botulinum A3 str. Loch Maree 6153378 YP_001787443.1 CDS CLK_1506 NC_010520.1 2311061 2312086 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 2311061..2312086 Clostridium botulinum A3 str. Loch Maree 6154190 YP_001787444.1 CDS CLK_1507 NC_010520.1 2312548 2313609 R identified by Glimmer3; hypothetical protein complement(2312548..2313609) Clostridium botulinum A3 str. Loch Maree 6152242 YP_001787445.1 CDS CLK_1508 NC_010520.1 2313653 2314297 R identified by match to protein family HMM PF00132; hexapeptide repeat-containing transferase complement(2313653..2314297) Clostridium botulinum A3 str. Loch Maree 6152930 YP_001787446.1 CDS CLK_1509 NC_010520.1 2314389 2315528 R identified by match to protein family HMM PF01041; aminotransferase complement(2314389..2315528) Clostridium botulinum A3 str. Loch Maree 6151689 YP_001787447.1 CDS CLK_1510 NC_010520.1 2315574 2316473 R identified by Glimmer3; hypothetical protein complement(2315574..2316473) Clostridium botulinum A3 str. Loch Maree 6152513 YP_001787448.1 CDS CLK_1511 NC_010520.1 2316675 2317736 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01208; glucose-1-phosphate thymidylyltransferase 2316675..2317736 Clostridium botulinum A3 str. Loch Maree 6151755 YP_001787449.1 CDS rfbB NC_010520.1 2317778 2318758 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 2317778..2318758 Clostridium botulinum A3 str. Loch Maree 6154633 YP_001787450.1 CDS CLK_1513 NC_010520.1 2319034 2319327 D hypothetical protein 2319034..2319327 Clostridium botulinum A3 str. Loch Maree 6153849 YP_001787451.1 CDS CLK_1514 NC_010520.1 2319581 2319874 D hypothetical protein 2319581..2319874 Clostridium botulinum A3 str. Loch Maree 6153092 YP_001787452.1 CDS CLK_1515 NC_010520.1 2320960 2322249 R lipase complement(2320960..2322249) Clostridium botulinum A3 str. Loch Maree 6152201 YP_001787453.1 CDS CLK_1516 NC_010520.1 2323309 2323434 R identified by Glimmer3; hypothetical protein complement(2323309..2323434) Clostridium botulinum A3 str. Loch Maree 6151485 YP_001787454.1 CDS CLK_1517 NC_010520.1 2323438 2324079 R ABC transporter permease complement(2323438..2324079) Clostridium botulinum A3 str. Loch Maree 6154361 YP_001787455.1 CDS CLK_1518 NC_010520.1 2324073 2324939 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2324073..2324939) Clostridium botulinum A3 str. Loch Maree 6151343 YP_001787456.1 CDS CLK_1519 NC_010520.1 2324939 2325316 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2324939..2325316) Clostridium botulinum A3 str. Loch Maree 6153820 YP_001787457.1 CDS CLK_1520 NC_010520.1 2325823 2327007 R identified by match to protein family HMM PF00201; match to protein family HMM PF04101; match to protein family HMM TIGR01426; glycosyl transferase family protein complement(2325823..2327007) Clostridium botulinum A3 str. Loch Maree 6151466 YP_001787458.1 CDS CLK_1521 NC_010520.1 2327000 2327353 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator complement(2327000..2327353) Clostridium botulinum A3 str. Loch Maree 6152012 YP_001787459.1 CDS CLK_1522 NC_010520.1 2327773 2328435 R identified by match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase complement(2327773..2328435) Clostridium botulinum A3 str. Loch Maree 6152703 YP_001787460.1 CDS CLK_1523 NC_010520.1 2328622 2328744 R hypothetical protein complement(2328622..2328744) Clostridium botulinum A3 str. Loch Maree 6151424 YP_001787461.1 CDS CLK_1524 NC_010520.1 2328976 2330226 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2328976..2330226) Clostridium botulinum A3 str. Loch Maree 6154739 YP_001787462.1 CDS CLK_1525 NC_010520.1 2330438 2330665 R identified by Glimmer3; hypothetical protein complement(2330438..2330665) Clostridium botulinum A3 str. Loch Maree 6153726 YP_001787463.1 CDS CLK_1526 NC_010520.1 2331160 2332617 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2331160..2332617) Clostridium botulinum A3 str. Loch Maree 6153942 YP_001787464.1 CDS CLK_1527 NC_010520.1 2332631 2333356 R identified by match to protein family HMM PF02361; ABC transporter permease complement(2332631..2333356) Clostridium botulinum A3 str. Loch Maree 6152919 YP_001787465.1 CDS CLK_1528 NC_010520.1 2333353 2333964 R identified by match to protein family HMM TIGR02185; hypothetical protein complement(2333353..2333964) Clostridium botulinum A3 str. Loch Maree 6154151 YP_001787466.1 CDS CLK_1529 NC_010520.1 2334365 2335327 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 2334365..2335327 Clostridium botulinum A3 str. Loch Maree 6153510 YP_001787467.1 CDS CLK_1530 NC_010520.1 2335390 2335617 R hypothetical protein complement(2335390..2335617) Clostridium botulinum A3 str. Loch Maree 6154381 YP_001787468.1 CDS CLK_1531 NC_010520.1 2335697 2336179 R identified by match to protein family HMM PF00583; acetyltransferase complement(2335697..2336179) Clostridium botulinum A3 str. Loch Maree 6153452 YP_001787469.1 CDS CLK_1532 NC_010520.1 2336604 2336756 R excinuclease ABC subunit C complement(2336604..2336756) Clostridium botulinum A3 str. Loch Maree 6153075 YP_001787470.1 CDS CLK_1533 NC_010520.1 2336925 2337482 R hypothetical protein complement(2336925..2337482) Clostridium botulinum A3 str. Loch Maree 6151547 YP_001787471.1 CDS CLK_1534 NC_010520.1 2338078 2340441 R identified by Glimmer3; hypothetical protein complement(2338078..2340441) Clostridium botulinum A3 str. Loch Maree 6154729 YP_001787472.1 CDS CLK_1535 NC_010520.1 2340505 2341206 R identified by match to protein family HMM PF01844; HNH endonuclease complement(2340505..2341206) Clostridium botulinum A3 str. Loch Maree 6153926 YP_001787473.1 CDS CLK_1536 NC_010520.1 2341620 2341766 R identified by Glimmer3; hypothetical protein complement(2341620..2341766) Clostridium botulinum A3 str. Loch Maree 6153612 YP_001787474.1 CDS CLK_1537 NC_010520.1 2342606 2343838 R identified by match to protein family HMM PF01420; type IC HsdS subunit complement(2342606..2343838) Clostridium botulinum A3 str. Loch Maree 6151861 YP_001787475.1 CDS hsdM NC_010520.1 2343851 2345386 R identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system, M subunit complement(2343851..2345386) Clostridium botulinum A3 str. Loch Maree 6154004 YP_001787476.1 CDS CLK_1539 NC_010520.1 2345730 2348480 R identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I site-specific deoxyribonuclease HsdR family subfamily complement(2345730..2348480) Clostridium botulinum A3 str. Loch Maree 6154942 YP_001787477.1 CDS CLK_1540 NC_010520.1 2349001 2349132 R hypothetical protein complement(2349001..2349132) Clostridium botulinum A3 str. Loch Maree 6153280 YP_001787478.1 CDS CLK_1541 NC_010520.1 2349415 2350440 R identified by Glimmer3; hypothetical protein complement(2349415..2350440) Clostridium botulinum A3 str. Loch Maree 6152463 YP_001787479.1 CDS CLK_1542 NC_010520.1 2352044 2355301 R identified by Glimmer3; hypothetical protein complement(2352044..2355301) Clostridium botulinum A3 str. Loch Maree 6152271 YP_001787480.1 CDS CLK_1543 NC_010520.1 2355294 2355896 R identified by Glimmer3; hypothetical protein complement(2355294..2355896) Clostridium botulinum A3 str. Loch Maree 6151677 YP_001787481.1 CDS CLK_1544 NC_010520.1 2356252 2357421 R identified by Glimmer3; hypothetical protein complement(2356252..2357421) Clostridium botulinum A3 str. Loch Maree 6154424 YP_001787482.1 CDS CLK_1545 NC_010520.1 2357749 2358633 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(2357749..2358633) Clostridium botulinum A3 str. Loch Maree 6152899 YP_001787483.1 CDS CLK_1546 NC_010520.1 2358682 2359587 R identified by match to protein family HMM PF00561; alpha/beta hydrolase complement(2358682..2359587) Clostridium botulinum A3 str. Loch Maree 6152902 YP_001787484.1 CDS CLK_1547 NC_010520.1 2359708 2360121 R tetracycline resistance domain-containing protein complement(2359708..2360121) Clostridium botulinum A3 str. Loch Maree 6151866 YP_001787485.1 CDS CLK_1548 NC_010520.1 2360306 2361229 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase complement(2360306..2361229) Clostridium botulinum A3 str. Loch Maree 6154867 YP_001787486.1 CDS CLK_1549 NC_010520.1 2361634 2362983 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 2361634..2362983 Clostridium botulinum A3 str. Loch Maree 6152166 YP_001787487.1 CDS CLK_1550 NC_010520.1 2363007 2365631 D identified by match to protein family HMM PF00534; match to protein family HMM PF00535; glycosyl transferase family protein 2363007..2365631 Clostridium botulinum A3 str. Loch Maree 6153333 YP_001787488.1 CDS CLK_1551 NC_010520.1 2365987 2367942 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03764; match to protein family HMM TIGR00231; tetracycline resistance protein complement(2365987..2367942) Clostridium botulinum A3 str. Loch Maree 6152688 YP_001787489.1 CDS CLK_1552 NC_010520.1 2368531 2369913 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(2368531..2369913) Clostridium botulinum A3 str. Loch Maree 6154597 YP_001787490.1 CDS CLK_1553 NC_010520.1 2370119 2371165 D identified by match to protein family HMM PF02423; ornithine cyclodeaminase/mu-crystallin family protein 2370119..2371165 Clostridium botulinum A3 str. Loch Maree 6153813 YP_001787491.1 CDS CLK_1554 NC_010520.1 2371319 2372188 D identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 2371319..2372188 Clostridium botulinum A3 str. Loch Maree 6153808 YP_001787492.1 CDS CLK_1555 NC_010520.1 2372491 2374575 R identified by match to protein family HMM PF02839; glycosyl hydrolase complement(2372491..2374575) Clostridium botulinum A3 str. Loch Maree 6152931 YP_001787493.1 CDS cadA-2 NC_010520.1 2374844 2376715 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase complement(2374844..2376715) Clostridium botulinum A3 str. Loch Maree 6152140 YP_001787494.1 CDS CLK_1557 NC_010520.1 2376896 2377171 R identified by match to protein family HMM PF02583; hypothetical protein complement(2376896..2377171) Clostridium botulinum A3 str. Loch Maree 6154347 YP_001787495.1 CDS CLK_1558 NC_010520.1 2377415 2377807 R identified by match to protein family HMM PF01814; match to protein family HMM TIGR02481; iron-binding protein, hemerythrin complement(2377415..2377807) Clostridium botulinum A3 str. Loch Maree 6151869 YP_001787496.1 CDS CLK_1559 NC_010520.1 2378075 2378365 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2378075..2378365) Clostridium botulinum A3 str. Loch Maree 6154538 YP_001787497.1 CDS CLK_1560 NC_010520.1 2378440 2379090 R identified by match to protein family HMM PF06130; propanediol utilization protein PduL-like protein complement(2378440..2379090) Clostridium botulinum A3 str. Loch Maree 6154906 YP_001787498.1 CDS eutE NC_010520.1 2379090 2380688 R identified by match to protein family HMM TIGR02518; acetaldehyde dehydrogenase complement(2379090..2380688) Clostridium botulinum A3 str. Loch Maree 6151792 YP_001787499.1 CDS CLK_1562 NC_010520.1 2380723 2381547 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2380723..2381547) Clostridium botulinum A3 str. Loch Maree 6152359 YP_001787500.1 CDS CLK_1563 NC_010520.1 2381568 2382230 R identified by match to protein family HMM PF05899; match to protein family HMM PF06249; ethanolamine utilization protein EutQ-like protein complement(2381568..2382230) Clostridium botulinum A3 str. Loch Maree 6153910 YP_001787501.1 CDS CLK_1564 NC_010520.1 2382275 2382538 R identified by match to protein family HMM PF03319; polyhedral organelle formation protein complement(2382275..2382538) Clostridium botulinum A3 str. Loch Maree 6154518 YP_001787502.1 CDS CLK_1565 NC_010520.1 2382535 2382837 R identified by match to protein family HMM PF00936; hypothetical protein complement(2382535..2382837) Clostridium botulinum A3 str. Loch Maree 6151403 YP_001787503.1 CDS CLK_1566 NC_010520.1 2382915 2383760 R identified by match to protein family HMM TIGR02529; ethanolamine utilization protein EutJ family protein complement(2382915..2383760) Clostridium botulinum A3 str. Loch Maree 6151847 YP_001787504.1 CDS CLK_1567 NC_010520.1 2383742 2384470 R hypothetical protein complement(2383742..2384470) Clostridium botulinum A3 str. Loch Maree 6152859 YP_001787505.1 CDS CLK_1568 NC_010520.1 2384477 2384923 R EutP/PduV family GTP-binding protein complement(2384477..2384923) Clostridium botulinum A3 str. Loch Maree 6154071 YP_001787506.1 CDS CLK_1569 NC_010520.1 2384920 2385273 R identified by match to protein family HMM PF00936; ethanolamine utilization protein EutS-like protein complement(2384920..2385273) Clostridium botulinum A3 str. Loch Maree 6152494 YP_001787507.1 CDS CLK_1570 NC_010520.1 2385313 2386266 R identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; glycyl-radical enzyme activating family protein complement(2385313..2386266) Clostridium botulinum A3 str. Loch Maree 6152222 YP_001787508.1 CDS CLK_1571 NC_010520.1 2386430 2388970 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; formate acetyltransferase complement(2386430..2388970) Clostridium botulinum A3 str. Loch Maree 6154958 YP_001787509.1 CDS CLK_1572 NC_010520.1 2389020 2390513 R aldehyde dehydrogenase complement(2389020..2390513) Clostridium botulinum A3 str. Loch Maree 6153779 YP_001787510.1 CDS CLK_1573 NC_010520.1 2390551 2390859 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2390551..2390859) Clostridium botulinum A3 str. Loch Maree 6152969 YP_001787511.1 CDS CLK_1574 NC_010520.1 2390883 2391179 R identified by match to protein family HMM PF00936; microcompartments family protein complement(2390883..2391179) Clostridium botulinum A3 str. Loch Maree 6153614 YP_001787512.1 CDS CLK_1575 NC_010520.1 2391196 2391405 R identified by Glimmer3; hypothetical protein complement(2391196..2391405) Clostridium botulinum A3 str. Loch Maree 6154765 YP_001787513.1 CDS CLK_1576 NC_010520.1 2391484 2391750 R identified by Glimmer3; hypothetical protein complement(2391484..2391750) Clostridium botulinum A3 str. Loch Maree 6151579 YP_001787514.1 CDS CLK_1577 NC_010520.1 2391737 2392849 R hypothetical protein complement(2391737..2392849) Clostridium botulinum A3 str. Loch Maree 6152617 YP_001787515.1 CDS CLK_1578 NC_010520.1 2393335 2394165 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2393335..2394165) Clostridium botulinum A3 str. Loch Maree 6152807 YP_001787516.1 CDS CLK_1579 NC_010520.1 2394268 2395410 R identified by match to protein family HMM PF00465; alcohol dehydrogenase complement(2394268..2395410) Clostridium botulinum A3 str. Loch Maree 6151823 YP_001787517.1 CDS CLK_1580 NC_010520.1 2395923 2397236 D identified by match to protein family HMM PF01554; MATE efflux family protein 2395923..2397236 Clostridium botulinum A3 str. Loch Maree 6152879 YP_001787518.1 CDS CLK_1581 NC_010520.1 2397333 2398577 R identified by match to protein family HMM PF07690; major facilitator transporter complement(2397333..2398577) Clostridium botulinum A3 str. Loch Maree 6153928 YP_001787519.1 CDS CLK_1582 NC_010520.1 2398618 2399307 R identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator complement(2398618..2399307) Clostridium botulinum A3 str. Loch Maree 6154849 YP_001787520.1 CDS CLK_1583 NC_010520.1 2399470 2400369 D identified by match to protein family HMM PF00583; match to protein family HMM PF01047; MarR family transcriptional regulator 2399470..2400369 Clostridium botulinum A3 str. Loch Maree 6151562 YP_001787521.1 CDS CLK_1584 NC_010520.1 2400510 2400629 D identified by Glimmer3; hypothetical protein 2400510..2400629 Clostridium botulinum A3 str. Loch Maree 6152686 YP_001787522.1 CDS CLK_1585 NC_010520.1 2400709 2401413 R hypothetical protein complement(2400709..2401413) Clostridium botulinum A3 str. Loch Maree 6153239 YP_001787523.1 CDS CLK_1586 NC_010520.1 2401510 2402298 R identified by match to protein family HMM PF09234; hypothetical protein complement(2401510..2402298) Clostridium botulinum A3 str. Loch Maree 6153673 YP_001787524.1 CDS CLK_1587 NC_010520.1 2402824 2403672 R carboxylesterase complement(2402824..2403672) Clostridium botulinum A3 str. Loch Maree 6151648 YP_001787525.1 CDS CLK_1588 NC_010520.1 2403692 2404054 R hypothetical protein complement(2403692..2404054) Clostridium botulinum A3 str. Loch Maree 6152232 YP_001787526.1 CDS CLK_1589 NC_010520.1 2404067 2404555 R identified by match to protein family HMM TIGR01764; excisionase complement(2404067..2404555) Clostridium botulinum A3 str. Loch Maree 6153152 YP_001787527.1 CDS CLK_1590 NC_010520.1 2405004 2405636 R identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase complement(2405004..2405636) Clostridium botulinum A3 str. Loch Maree 6152105 YP_001787528.1 CDS CLK_1591 NC_010520.1 2405611 2408298 R identified by Glimmer3; hypothetical protein complement(2405611..2408298) Clostridium botulinum A3 str. Loch Maree 6154753 YP_001787529.1 CDS CLK_1592 NC_010520.1 2408914 2409996 R FAD/NAD(P)-binding domain; oxidoreductase complement(2408914..2409996) Clostridium botulinum A3 str. Loch Maree 6154515 YP_001787530.1 CDS CLK_1593 NC_010520.1 2409989 2410234 R hypothetical protein complement(2409989..2410234) Clostridium botulinum A3 str. Loch Maree 6154939 YP_001787531.1 CDS CLK_1594 NC_010520.1 2410252 2410743 R hypothetical protein complement(2410252..2410743) Clostridium botulinum A3 str. Loch Maree 6152466 YP_001787532.1 CDS CLK_1595 NC_010520.1 2411223 2412263 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase oxidoreductase complement(2411223..2412263) Clostridium botulinum A3 str. Loch Maree 6151683 YP_001787533.1 CDS CLK_1596 NC_010520.1 2412330 2413187 R identified by match to protein family HMM PF01261; AP endonuclease complement(2412330..2413187) Clostridium botulinum A3 str. Loch Maree 6154587 YP_001787534.1 CDS CLK_1597 NC_010520.1 2413271 2414410 R identified by match to protein family HMM PF01761; 3-dehydroquinate synthase complement(2413271..2414410) Clostridium botulinum A3 str. Loch Maree 6153747 YP_001787535.1 CDS CLK_1598 NC_010520.1 2414852 2415871 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2414852..2415871) Clostridium botulinum A3 str. Loch Maree 6151730 YP_001787536.1 CDS CLK_1599 NC_010520.1 2415868 2416539 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2415868..2416539) Clostridium botulinum A3 str. Loch Maree 6153316 YP_001787537.1 CDS CLK_1600 NC_010520.1 2416736 2417446 R hypothetical protein complement(2416736..2417446) Clostridium botulinum A3 str. Loch Maree 6152549 YP_001787538.1 CDS CLK_1601 NC_010520.1 2417439 2419547 R hypothetical protein complement(2417439..2419547) Clostridium botulinum A3 str. Loch Maree 6151690 YP_001787539.1 CDS CLK_1602 NC_010520.1 2419619 2420494 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2419619..2420494) Clostridium botulinum A3 str. Loch Maree 6152609 YP_001787540.1 CDS CLK_1603 NC_010520.1 2420554 2422548 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2420554..2422548) Clostridium botulinum A3 str. Loch Maree 6151606 YP_001787541.1 CDS CLK_1604 NC_010520.1 2422812 2424803 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2422812..2424803) Clostridium botulinum A3 str. Loch Maree 6154886 YP_001787542.1 CDS CLK_1605 NC_010520.1 2424793 2425560 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2424793..2425560) Clostridium botulinum A3 str. Loch Maree 6153674 YP_001787543.1 CDS CLK_1606 NC_010520.1 2426348 2426701 R hypothetical protein complement(2426348..2426701) Clostridium botulinum A3 str. Loch Maree 6151448 YP_001787544.1 CDS CLK_1607 NC_010520.1 2427027 2429120 R identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF05043; match to protein family HMM PF08279; PRD domain-containing protein complement(2427027..2429120) Clostridium botulinum A3 str. Loch Maree 6152239 YP_001787545.1 CDS ulaA NC_010520.1 2429332 2430696 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2429332..2430696) Clostridium botulinum A3 str. Loch Maree 6153545 YP_001787546.1 CDS CLK_1609 NC_010520.1 2430709 2430993 R identified by match to protein family HMM PF02302; PTS system L-ascorbate family transporter subunit IIB complement(2430709..2430993) Clostridium botulinum A3 str. Loch Maree 6154531 YP_001787547.1 CDS CLK_1610 NC_010520.1 2431022 2431459 R identified by match to protein family HMM PF00359; PTS system L-ascorbate family transporter subunit IIA complement(2431022..2431459) Clostridium botulinum A3 str. Loch Maree 6154982 YP_001787548.1 CDS CLK_1611 NC_010520.1 2431483 2432199 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(2431483..2432199) Clostridium botulinum A3 str. Loch Maree 6152068 YP_001787549.1 CDS CLK_1612 NC_010520.1 2432470 2433204 R identified by Glimmer3; hypothetical protein complement(2432470..2433204) Clostridium botulinum A3 str. Loch Maree 6151698 YP_001787550.1 CDS CLK_1613 NC_010520.1 2433567 2434271 D identified by match to protein family HMM PF00557; peptidase, M24 family protein 2433567..2434271 Clostridium botulinum A3 str. Loch Maree 6152875 YP_001787551.1 CDS CLK_1614 NC_010520.1 2434345 2435751 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 2434345..2435751 Clostridium botulinum A3 str. Loch Maree 6153395 YP_001787552.1 CDS CLK_1615 NC_010520.1 2435854 2436594 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(2435854..2436594) Clostridium botulinum A3 str. Loch Maree 6154112 YP_001787553.1 CDS CLK_1616 NC_010520.1 2436601 2437491 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(2436601..2437491) Clostridium botulinum A3 str. Loch Maree 6152086 YP_001787554.1 CDS CLK_1617 NC_010520.1 2437918 2438430 D hypothetical protein 2437918..2438430 Clostridium botulinum A3 str. Loch Maree 6153401 YP_001787555.1 CDS enr NC_010520.1 2438551 2440548 R identified by match to protein family HMM PF00070; match to protein family HMM PF00724; match to protein family HMM PF07992; 2-enoate reductase complement(2438551..2440548) Clostridium botulinum A3 str. Loch Maree 6153749 YP_001787556.1 CDS CLK_1619 NC_010520.1 2440643 2441440 R identified by match to protein family HMM PF00376; MerR family transcriptional regulator complement(2440643..2441440) Clostridium botulinum A3 str. Loch Maree 6151890 YP_001787557.1 CDS CLK_1620 NC_010520.1 2442154 2442915 R identified by Glimmer3; hypothetical protein complement(2442154..2442915) Clostridium botulinum A3 str. Loch Maree 6152908 YP_001787558.1 CDS CLK_1621 NC_010520.1 2443105 2443272 R identified by Glimmer3; hypothetical protein complement(2443105..2443272) Clostridium botulinum A3 str. Loch Maree 6154029 YP_001787559.1 CDS CLK_1622 NC_010520.1 2443508 2443972 D identified by match to protein family HMM PF00583; acetyltransferase 2443508..2443972 Clostridium botulinum A3 str. Loch Maree 6153959 YP_001787560.1 CDS CLK_1623 NC_010520.1 2444106 2444276 R identified by Glimmer3; hypothetical protein complement(2444106..2444276) Clostridium botulinum A3 str. Loch Maree 6154912 YP_001787561.1 CDS CLK_1624 NC_010520.1 2444277 2444417 D identified by Glimmer3; hypothetical protein 2444277..2444417 Clostridium botulinum A3 str. Loch Maree 6151351 YP_001787562.1 CDS CLK_1625 NC_010520.1 2444565 2444798 R hypothetical protein complement(2444565..2444798) Clostridium botulinum A3 str. Loch Maree 6152588 YP_001787563.1 CDS CLK_1626 NC_010520.1 2445660 2446235 R identified by match to protein family HMM PF00583; acetyltransferase complement(2445660..2446235) Clostridium botulinum A3 str. Loch Maree 6151940 YP_001787564.1 CDS CLK_1627 NC_010520.1 2446703 2447158 D hypothetical protein 2446703..2447158 Clostridium botulinum A3 str. Loch Maree 6152783 YP_001787565.1 CDS CLK_1628 NC_010520.1 2447296 2448195 D identified by Glimmer3; hypothetical protein 2447296..2448195 Clostridium botulinum A3 str. Loch Maree 6154092 YP_001787566.1 CDS CLK_1629 NC_010520.1 2448686 2450005 D identified by match to protein family HMM PF00324; match to protein family HMM PF05525; amino acid permease 2448686..2450005 Clostridium botulinum A3 str. Loch Maree 6153923 YP_001787567.1 CDS hgdC NC_010520.1 2450281 2451054 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; 2-hydroxyglutaryl-CoA dehydratase complement(2450281..2451054) Clostridium botulinum A3 str. Loch Maree 6152850 YP_001787568.1 CDS CLK_1631 NC_010520.1 2451134 2452624 R hypothetical protein complement(2451134..2452624) Clostridium botulinum A3 str. Loch Maree 6151949 YP_001787569.1 CDS CLK_1632 NC_010520.1 2452925 2453974 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(2452925..2453974) Clostridium botulinum A3 str. Loch Maree 6153670 YP_001787570.1 CDS CLK_1633 NC_010520.1 2453993 2454778 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(2453993..2454778) Clostridium botulinum A3 str. Loch Maree 6152685 YP_001787571.1 CDS CLK_1634 NC_010520.1 2454817 2455950 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2454817..2455950) Clostridium botulinum A3 str. Loch Maree 6151637 YP_001787572.1 CDS CLK_1635 NC_010520.1 2456190 2456318 R identified by Glimmer3; hypothetical protein complement(2456190..2456318) Clostridium botulinum A3 str. Loch Maree 6154292 YP_001787573.1 CDS CLK_1636 NC_010520.1 2456445 2457572 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit beta complement(2456445..2457572) Clostridium botulinum A3 str. Loch Maree 6152292 YP_001787574.1 CDS CLK_1637 NC_010520.1 2457572 2458804 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit alpha complement(2457572..2458804) Clostridium botulinum A3 str. Loch Maree 6151446 YP_001787575.1 CDS CLK_1638 NC_010520.1 2458867 2460081 R identified by match to protein family HMM PF02515; hydroxyacyl-CoA:R-2-hydroxyglutaryl-CoA transferase complement(2458867..2460081) Clostridium botulinum A3 str. Loch Maree 6152050 YP_001787576.1 CDS CLK_1639 NC_010520.1 2460825 2461643 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(2460825..2461643) Clostridium botulinum A3 str. Loch Maree 6154930 YP_001787577.1 CDS CLK_1640 NC_010520.1 2462196 2463467 D identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit 2462196..2463467 Clostridium botulinum A3 str. Loch Maree 6153420 YP_001787578.1 CDS CLK_1641 NC_010520.1 2463470 2465164 D identified by match to protein family HMM PF01869; match to protein family HMM PF06050; match to protein family HMM TIGR00241; R-2-hydroxyglutaryl-CoA dehydratase subunit/ R-2-hydroxyglutaryl-CoA dehydratase activase 2463470..2465164 Clostridium botulinum A3 str. Loch Maree 6152848 YP_001787579.1 CDS CLK_1642 NC_010520.1 2465463 2466614 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(2465463..2466614) Clostridium botulinum A3 str. Loch Maree 6154167 YP_001787580.1 CDS CLK_1643 NC_010520.1 2467198 2467797 R hypothetical protein complement(2467198..2467797) Clostridium botulinum A3 str. Loch Maree 6153455 YP_001787581.1 CDS CLK_1644 NC_010520.1 2468211 2468804 R identified by match to protein family HMM PF00583; acetyltransferase complement(2468211..2468804) Clostridium botulinum A3 str. Loch Maree 6153921 YP_001787582.1 CDS CLK_1645 NC_010520.1 2469149 2469562 D identified by match to protein family HMM PF00903; fosfomycin resistance protein 2469149..2469562 Clostridium botulinum A3 str. Loch Maree 6151387 YP_001787583.1 CDS gntP NC_010520.1 2469726 2471114 R identified by match to protein family HMM PF02447; match to protein family HMM PF03600; match to protein family HMM TIGR00791; gluconate permease complement(2469726..2471114) Clostridium botulinum A3 str. Loch Maree 6154985 YP_001787584.1 CDS pdxA NC_010520.1 2471341 2472345 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(2471341..2472345) Clostridium botulinum A3 str. Loch Maree 6153953 YP_001787585.1 CDS CLK_1648 NC_010520.1 2472358 2473695 R hypothetical protein complement(2472358..2473695) Clostridium botulinum A3 str. Loch Maree 6152925 YP_001787586.1 CDS CLK_1649 NC_010520.1 2473760 2474518 R identified by match to protein family HMM PF00455; match to protein family HMM PF08220; match to protein family HMM PF08279; DeoR family transcriptional regulator complement(2473760..2474518) Clostridium botulinum A3 str. Loch Maree 6153912 YP_001787587.1 CDS CLK_1650 NC_010520.1 2475146 2476039 R identified by match to protein family HMM PF02517; CAAX amino terminal protease complement(2475146..2476039) Clostridium botulinum A3 str. Loch Maree 6153597 YP_001787588.1 CDS CLK_1651 NC_010520.1 2476454 2477839 D identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 2476454..2477839 Clostridium botulinum A3 str. Loch Maree 6151822 YP_001787589.1 CDS CLK_1652 NC_010520.1 2478007 2478171 R identified by Glimmer3; hypothetical protein complement(2478007..2478171) Clostridium botulinum A3 str. Loch Maree 6151502 YP_001787590.1 CDS CLK_1653 NC_010520.1 2478289 2478882 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2478289..2478882) Clostridium botulinum A3 str. Loch Maree 6154394 YP_001787591.1 CDS CLK_1654 NC_010520.1 2479026 2479553 D hypothetical protein 2479026..2479553 Clostridium botulinum A3 str. Loch Maree 6153890 YP_001787592.1 CDS CLK_1655 NC_010520.1 2479695 2480348 D hypothetical protein 2479695..2480348 Clostridium botulinum A3 str. Loch Maree 6153106 YP_001787593.1 CDS CLK_1656 NC_010520.1 2480504 2482966 D hypothetical protein 2480504..2482966 Clostridium botulinum A3 str. Loch Maree 6151805 YP_001787594.1 CDS CLK_1657 NC_010520.1 2483036 2484109 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase oxidoreductase complement(2483036..2484109) Clostridium botulinum A3 str. Loch Maree 6154778 YP_001787595.1 CDS CLK_1658 NC_010520.1 2484543 2486507 R identified by match to protein family HMM PF03063; match to protein family HMM TIGR01702; carbon monoxide dehydrogenase complement(2484543..2486507) Clostridium botulinum A3 str. Loch Maree 6153707 YP_001787596.1 CDS hypA NC_010520.1 2487302 2487643 D identified by match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 2487302..2487643 Clostridium botulinum A3 str. Loch Maree 6154397 YP_001787597.1 CDS hypB NC_010520.1 2487646 2488284 D identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 2487646..2488284 Clostridium botulinum A3 str. Loch Maree 6151970 YP_001787598.1 CDS CLK_1661 NC_010520.1 2488307 2488663 R identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein complement(2488307..2488663) Clostridium botulinum A3 str. Loch Maree 6153099 YP_001787599.1 CDS CLK_1662 NC_010520.1 2488759 2489604 R identified by match to protein family HMM PF00037; match to protein family HMM PF01656; iron-sulfur binding protein complement(2488759..2489604) Clostridium botulinum A3 str. Loch Maree 6153971 YP_001787600.1 CDS CLK_1663 NC_010520.1 2489595 2490428 R identified by match to protein family HMM PF00037; match to protein family HMM PF01656; iron-sulfur binding protein complement(2489595..2490428) Clostridium botulinum A3 str. Loch Maree 6153398 YP_001787601.1 CDS CLK_1664 NC_010520.1 2490453 2490812 R identified by match to protein family HMM PF02579; dinitrogenase iron-molybdenum cofactor family protein complement(2490453..2490812) Clostridium botulinum A3 str. Loch Maree 6154200 YP_001787602.1 CDS CLK_1665 NC_010520.1 2491215 2491592 R identified by Glimmer3; hypothetical protein complement(2491215..2491592) Clostridium botulinum A3 str. Loch Maree 6151734 YP_001787603.1 CDS motB NC_010520.1 2491887 2492651 R identified by match to protein family HMM PF00691; chemotaxis protein MotB complement(2491887..2492651) Clostridium botulinum A3 str. Loch Maree 6152886 YP_001787604.1 CDS motA NC_010520.1 2492669 2493454 R With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA complement(2492669..2493454) Clostridium botulinum A3 str. Loch Maree 6152623 YP_001787605.1 CDS CLK_1668 NC_010520.1 2493483 2493614 D identified by Glimmer3; hypothetical protein 2493483..2493614 Clostridium botulinum A3 str. Loch Maree 6153166 YP_001787606.1 CDS CLK_1669 NC_010520.1 2493963 2494586 R hypothetical protein complement(2493963..2494586) Clostridium botulinum A3 str. Loch Maree 6151821 YP_001787607.1 CDS CLK_1670 NC_010520.1 2495050 2495388 R hypothetical protein complement(2495050..2495388) Clostridium botulinum A3 str. Loch Maree 6153485 YP_001787608.1 CDS CLK_1671 NC_010520.1 2495394 2497349 R identified by match to protein family HMM PF03169; match to protein family HMM TIGR00728; match to protein family HMM TIGR00733; OPT family oligopeptide transporter complement(2495394..2497349) Clostridium botulinum A3 str. Loch Maree 6154482 YP_001787609.1 CDS pepD NC_010520.1 2497467 2498912 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(2497467..2498912) Clostridium botulinum A3 str. Loch Maree 6151443 YP_001787610.1 CDS CLK_1673 NC_010520.1 2499470 2500498 R identified by match to protein family HMM PF01212; low specificity L-threonine aldolase complement(2499470..2500498) Clostridium botulinum A3 str. Loch Maree 6152371 YP_001787611.1 CDS CLK_1674 NC_010520.1 2501204 2501350 D identified by Glimmer3; hypothetical protein 2501204..2501350 Clostridium botulinum A3 str. Loch Maree 6153915 YP_001787612.1 CDS CLK_1677 NC_010520.1 2502875 2503672 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase 2502875..2503672 Clostridium botulinum A3 str. Loch Maree 6152162 YP_001787613.1 CDS CLK_1678 NC_010520.1 2504195 2505373 R sodium extrusion protein NatB complement(2504195..2505373) Clostridium botulinum A3 str. Loch Maree 6153758 YP_001787614.1 CDS CLK_1679 NC_010520.1 2505387 2506106 R identified by match to protein family HMM PF00005; sodium extrusion ATP-binding protein NatA complement(2505387..2506106) Clostridium botulinum A3 str. Loch Maree 6152955 YP_001787615.1 CDS CLK_1680 NC_010520.1 2506572 2507027 R identified by match to protein family HMM PF00583; acetyltransferase complement(2506572..2507027) Clostridium botulinum A3 str. Loch Maree 6153801 YP_001787616.1 CDS CLK_1681 NC_010520.1 2507041 2507505 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(2507041..2507505) Clostridium botulinum A3 str. Loch Maree 6151373 YP_001787617.1 CDS CLK_1682 NC_010520.1 2507924 2508055 D identified by Glimmer3; hypothetical protein 2507924..2508055 Clostridium botulinum A3 str. Loch Maree 6152153 YP_001787618.1 CDS CLK_1683 NC_010520.1 2508261 2508665 R hypothetical protein complement(2508261..2508665) Clostridium botulinum A3 str. Loch Maree 6153630 YP_001787619.1 CDS CLK_1684 NC_010520.1 2509056 2510126 R identified by match to protein family HMM PF01208; uroporphyrinogen decarboxylase complement(2509056..2510126) Clostridium botulinum A3 str. Loch Maree 6154443 YP_001787620.1 CDS CLK_1685 NC_010520.1 2510616 2512064 R identified by match to protein family HMM PF01266; match to protein family HMM PF04324; oxidoreductase, FAD/[2Fe-2S]-binding complement(2510616..2512064) Clostridium botulinum A3 str. Loch Maree 6151969 YP_001787621.1 CDS CLK_1686 NC_010520.1 2512413 2513231 D identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator 2512413..2513231 Clostridium botulinum A3 str. Loch Maree 6152980 YP_001787622.1 CDS CLK_1687 NC_010520.1 2513440 2514843 R identified by match to protein family HMM PF00324; amino acid permease complement(2513440..2514843) Clostridium botulinum A3 str. Loch Maree 6153536 YP_001787623.1 CDS CLK_1688 NC_010520.1 2515278 2515820 R identified by match to protein family HMM PF01661; hypothetical protein complement(2515278..2515820) Clostridium botulinum A3 str. Loch Maree 6154595 YP_001787624.1 CDS CLK_1689 NC_010520.1 2515833 2515949 R identified by Glimmer3; hypothetical protein complement(2515833..2515949) Clostridium botulinum A3 str. Loch Maree 6153357 YP_001787625.1 CDS CLK_1690 NC_010520.1 2516204 2516461 R identified by match to protein family HMM PF06961; hypothetical protein complement(2516204..2516461) Clostridium botulinum A3 str. Loch Maree 6154412 YP_001787626.1 CDS CLK_1691 NC_010520.1 2517056 2517217 D hypothetical protein 2517056..2517217 Clostridium botulinum A3 str. Loch Maree 6154193 YP_001787627.1 CDS CLK_1692 NC_010520.1 2517235 2517666 D identified by match to protein family HMM PF01047; match to protein family HMM PF01978; MarR family transcriptional regulator 2517235..2517666 Clostridium botulinum A3 str. Loch Maree 6151534 YP_001787628.1 CDS CLK_1693 NC_010520.1 2517669 2518061 D hypothetical protein 2517669..2518061 Clostridium botulinum A3 str. Loch Maree 6153022 YP_001787629.1 CDS CLK_1694 NC_010520.1 2518134 2518514 R ATP-binding protein complement(2518134..2518514) Clostridium botulinum A3 str. Loch Maree 6153837 YP_001787630.1 CDS thiM NC_010520.1 2518976 2519773 R identified by match to protein family HMM PF02110; hydroxyethylthiazole kinase complement(2518976..2519773) Clostridium botulinum A3 str. Loch Maree 6153693 YP_001787631.1 CDS thiW NC_010520.1 2519751 2520320 R identified by match to protein family HMM TIGR02359; thiW protein complement(2519751..2520320) Clostridium botulinum A3 str. Loch Maree 6151742 YP_001787632.1 CDS CLK_1697 NC_010520.1 2520763 2521200 R identified by match to protein family HMM PF00583; acetyltransferase complement(2520763..2521200) Clostridium botulinum A3 str. Loch Maree 6152516 YP_001787633.1 CDS CLK_1698 NC_010520.1 2521336 2522064 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(2521336..2522064) Clostridium botulinum A3 str. Loch Maree 6153325 YP_001787634.1 CDS CLK_1699 NC_010520.1 2522248 2522520 R hypothetical protein complement(2522248..2522520) Clostridium botulinum A3 str. Loch Maree 6154111 YP_001787635.1 CDS CLK_1700 NC_010520.1 2522583 2522717 R identified by Glimmer3; hypothetical protein complement(2522583..2522717) Clostridium botulinum A3 str. Loch Maree 6154874 YP_001787636.1 CDS bioD NC_010520.1 2522805 2523488 R DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase complement(2522805..2523488) Clostridium botulinum A3 str. Loch Maree 6151383 YP_001787637.1 CDS bioB NC_010520.1 2523491 2524447 R identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase complement(2523491..2524447) Clostridium botulinum A3 str. Loch Maree 6154520 YP_001787638.1 CDS CLK_1703 NC_010520.1 2524440 2525000 R identified by match to protein family HMM PF02632; BioY family protein complement(2524440..2525000) Clostridium botulinum A3 str. Loch Maree 6153496 YP_001787639.1 CDS CLK_1704 NC_010520.1 2525140 2525469 R hypothetical protein complement(2525140..2525469) Clostridium botulinum A3 str. Loch Maree 6152858 YP_001787640.1 CDS CLK_1705 NC_010520.1 2525457 2525885 R identified by match to protein family HMM PF01022; match to protein family HMM PF01047; MarR family transcriptional regulator complement(2525457..2525885) Clostridium botulinum A3 str. Loch Maree 6152179 YP_001787641.1 CDS CLK_1706 NC_010520.1 2526027 2526623 R hypothetical protein complement(2526027..2526623) Clostridium botulinum A3 str. Loch Maree 6154876 YP_001787642.1 CDS CLK_1707 NC_010520.1 2526801 2528594 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; M24 family metallopeptidase 2526801..2528594 Clostridium botulinum A3 str. Loch Maree 6152365 YP_001787643.1 CDS CLK_1708 NC_010520.1 2528625 2530022 D identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; amino acid/peptide transporter 2528625..2530022 Clostridium botulinum A3 str. Loch Maree 6151415 YP_001787644.1 CDS CLK_1709 NC_010520.1 2530137 2530391 R identified by Glimmer3; hypothetical protein complement(2530137..2530391) Clostridium botulinum A3 str. Loch Maree 6152489 YP_001787645.1 CDS CLK_1710 NC_010520.1 2530564 2530812 R identified by Glimmer3; hypothetical protein complement(2530564..2530812) Clostridium botulinum A3 str. Loch Maree 6151715 YP_001787646.1 CDS CLK_1711 NC_010520.1 2531133 2531402 R hypothetical protein complement(2531133..2531402) Clostridium botulinum A3 str. Loch Maree 6154355 YP_001787647.1 CDS CLK_1712 NC_010520.1 2531669 2532001 D hypothetical protein 2531669..2532001 Clostridium botulinum A3 str. Loch Maree 6153426 YP_001787648.1 CDS CLK_1713 NC_010520.1 2532166 2533167 R identified by match to protein family HMM PF02275; match to protein family HMM PF03417; choloylglycine hydrolase complement(2532166..2533167) Clostridium botulinum A3 str. Loch Maree 6152367 YP_001787649.1 CDS CLK_1714 NC_010520.1 2533365 2533946 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; hypothetical protein complement(2533365..2533946) Clostridium botulinum A3 str. Loch Maree 6152241 YP_001787650.1 CDS CLK_1715 NC_010520.1 2534413 2534556 R identified by Glimmer3; hypothetical protein complement(2534413..2534556) Clostridium botulinum A3 str. Loch Maree 6154251 YP_001787651.1 CDS CLK_1716 NC_010520.1 2534843 2534971 R identified by Glimmer3; hypothetical protein complement(2534843..2534971) Clostridium botulinum A3 str. Loch Maree 6153810 YP_001787652.1 CDS CLK_1717 NC_010520.1 2535029 2535232 R identified by Glimmer3; hypothetical protein complement(2535029..2535232) Clostridium botulinum A3 str. Loch Maree 6152739 YP_001787653.1 CDS CLK_1718 NC_010520.1 2535551 2535664 R identified by Glimmer3; hypothetical protein complement(2535551..2535664) Clostridium botulinum A3 str. Loch Maree 6152600 YP_001787654.1 CDS CLK_1719 NC_010520.1 2535868 2536056 R phage surface protein complement(2535868..2536056) Clostridium botulinum A3 str. Loch Maree 6152857 YP_001787655.1 CDS CLK_1720 NC_010520.1 2536349 2536681 D identified by Glimmer3; hypothetical protein 2536349..2536681 Clostridium botulinum A3 str. Loch Maree 6151807 YP_001787656.1 CDS CLK_1721 NC_010520.1 2536714 2536827 R identified by Glimmer3; hypothetical protein complement(2536714..2536827) Clostridium botulinum A3 str. Loch Maree 6154179 YP_001787657.1 CDS CLK_1722 NC_010520.1 2537141 2538124 D hypothetical protein 2537141..2538124 Clostridium botulinum A3 str. Loch Maree 6153465 YP_001787658.1 CDS CLK_1723 NC_010520.1 2538219 2538386 R hypothetical protein complement(2538219..2538386) Clostridium botulinum A3 str. Loch Maree 6153028 YP_001787659.1 CDS CLK_1724 NC_010520.1 2538685 2538960 R hypothetical protein complement(2538685..2538960) Clostridium botulinum A3 str. Loch Maree 6152207 YP_001787660.1 CDS CLK_1725 NC_010520.1 2539164 2539757 R lipoprotein complement(2539164..2539757) Clostridium botulinum A3 str. Loch Maree 6151658 YP_001787661.1 CDS msrB NC_010520.1 2539923 2540372 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(2539923..2540372) Clostridium botulinum A3 str. Loch Maree 6154321 YP_001787662.1 CDS sodF NC_010520.1 2540604 2541200 R identified by match to protein family HMM PF00081; match to protein family HMM PF02777; Mn/Fe superoxide dismutase complement(2540604..2541200) Clostridium botulinum A3 str. Loch Maree 6153838 YP_001787663.1 CDS CLK_1728 NC_010520.1 2541312 2543057 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein/permease complement(2541312..2543057) Clostridium botulinum A3 str. Loch Maree 6152519 YP_001787664.1 CDS CLK_1729 NC_010520.1 2543050 2544849 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(2543050..2544849) Clostridium botulinum A3 str. Loch Maree 6153511 YP_001787665.1 CDS CLK_1730 NC_010520.1 2545129 2546088 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(2545129..2546088) Clostridium botulinum A3 str. Loch Maree 6153862 YP_001787666.1 CDS CLK_1731 NC_010520.1 2546573 2547307 R hypothetical protein complement(2546573..2547307) Clostridium botulinum A3 str. Loch Maree 6153659 YP_001787667.1 CDS CLK_1732 NC_010520.1 2547343 2548089 R hypothetical protein complement(2547343..2548089) Clostridium botulinum A3 str. Loch Maree 6154727 YP_001787668.1 CDS CLK_1733 NC_010520.1 2548082 2549002 R identified by match to protein family HMM PF00005; antibiotic ABC transporter ATP-binding protein complement(2548082..2549002) Clostridium botulinum A3 str. Loch Maree 6152054 YP_001787669.1 CDS CLK_1734 NC_010520.1 2549204 2550115 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2549204..2550115) Clostridium botulinum A3 str. Loch Maree 6152933 YP_001787670.1 CDS CLK_1735 NC_010520.1 2550112 2550819 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2550112..2550819) Clostridium botulinum A3 str. Loch Maree 6153109 YP_001787671.1 CDS CLK_1736 NC_010520.1 2551438 2552214 R identified by match to protein family HMM PF08241; methyltransferase complement(2551438..2552214) Clostridium botulinum A3 str. Loch Maree 6153249 YP_001787672.1 CDS CLK_1737 NC_010520.1 2552486 2553088 D identified by match to protein family HMM PF00929; exonuclease 2552486..2553088 Clostridium botulinum A3 str. Loch Maree 6154410 YP_001787673.1 CDS CLK_1738 NC_010520.1 2553105 2553341 R identified by match to protein family HMM PF01381; DNA-binding protein complement(2553105..2553341) Clostridium botulinum A3 str. Loch Maree 6151497 YP_001787674.1 CDS tgl NC_010520.1 2553581 2554402 R involved in assembly of spore coat proteins such as GerQ by catalyzing epsilon-(gamma-glutamyl)lysine cross links; transglutaminase complement(2553581..2554402) Clostridium botulinum A3 str. Loch Maree 6153716 YP_001787675.1 CDS CLK_1740 NC_010520.1 2554399 2555394 R identified by Glimmer3; hypothetical protein complement(2554399..2555394) Clostridium botulinum A3 str. Loch Maree 6153137 YP_001787676.1 CDS CLK_1741 NC_010520.1 2556265 2556942 R hypothetical protein complement(2556265..2556942) Clostridium botulinum A3 str. Loch Maree 6151961 YP_001787677.1 CDS CLK_1742 NC_010520.1 2556947 2557396 R hypothetical protein complement(2556947..2557396) Clostridium botulinum A3 str. Loch Maree 6154414 YP_001787678.1 CDS CLK_1743 NC_010520.1 2557401 2561039 R identified by match to protein family HMM PF00004; stage V sporulation protein K complement(2557401..2561039) Clostridium botulinum A3 str. Loch Maree 6152563 YP_001787679.1 CDS CLK_1744 NC_010520.1 2561551 2561823 D identified by Glimmer3; hypothetical protein 2561551..2561823 Clostridium botulinum A3 str. Loch Maree 6154767 YP_001787681.1 CDS CLK_1746 NC_010520.1 2562473 2562586 R identified by Glimmer3; hypothetical protein complement(2562473..2562586) Clostridium botulinum A3 str. Loch Maree 6154025 YP_001787682.1 CDS CLK_1747 NC_010520.1 2562669 2562974 R hypothetical protein complement(2562669..2562974) Clostridium botulinum A3 str. Loch Maree 6152128 YP_001787683.1 CDS CLK_1748 NC_010520.1 2562967 2563491 R hypothetical protein complement(2562967..2563491) Clostridium botulinum A3 str. Loch Maree 6154583 YP_001787684.1 CDS CLK_1749 NC_010520.1 2563472 2563924 R identified by Glimmer3; hypothetical protein complement(2563472..2563924) Clostridium botulinum A3 str. Loch Maree 6152945 YP_001787685.1 CDS CLK_1750 NC_010520.1 2563921 2564433 R identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; ECF subfamily RNA polymerase sigma factor complement(2563921..2564433) Clostridium botulinum A3 str. Loch Maree 6152234 YP_001787686.1 CDS CLK_1751 NC_010520.1 2564887 2565993 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(2564887..2565993) Clostridium botulinum A3 str. Loch Maree 6153629 YP_001787687.1 CDS CLK_1752 NC_010520.1 2566672 2567379 R identified by match to protein family HMM PF04239; hypothetical protein complement(2566672..2567379) Clostridium botulinum A3 str. Loch Maree 6152324 YP_001787688.1 CDS CLK_1753 NC_010520.1 2567675 2569027 R identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; poly(A) polymerase complement(2567675..2569027) Clostridium botulinum A3 str. Loch Maree 6154564 YP_001787689.1 CDS CLK_1754 NC_010520.1 2569017 2570027 R hypothetical protein complement(2569017..2570027) Clostridium botulinum A3 str. Loch Maree 6153757 YP_001787690.1 CDS CLK_1755 NC_010520.1 2570208 2571032 R identified by match to protein family HMM PF02517; membrane-associated protease complement(2570208..2571032) Clostridium botulinum A3 str. Loch Maree 6154047 YP_001787691.1 CDS CLK_1756 NC_010520.1 2571223 2571489 R identified by Glimmer3; hypothetical protein complement(2571223..2571489) Clostridium botulinum A3 str. Loch Maree 6153151 YP_001787692.1 CDS CLK_1757 NC_010520.1 2571791 2572123 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 2571791..2572123 Clostridium botulinum A3 str. Loch Maree 6152117 YP_001787693.1 CDS CLK_1758 NC_010520.1 2572197 2572901 D hypothetical protein 2572197..2572901 Clostridium botulinum A3 str. Loch Maree 6154123 YP_001787694.1 CDS CLK_1759 NC_010520.1 2572975 2574225 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2572975..2574225) Clostridium botulinum A3 str. Loch Maree 6151570 YP_001787695.1 CDS CLK_1760 NC_010520.1 2574218 2574898 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2574218..2574898) Clostridium botulinum A3 str. Loch Maree 6154455 YP_001787696.1 CDS CLK_1761 NC_010520.1 2574891 2575430 R identified by match to protein family HMM PF00627; UBA/TS-N domain-containing protein complement(2574891..2575430) Clostridium botulinum A3 str. Loch Maree 6154660 YP_001787697.1 CDS CLK_1762 NC_010520.1 2575580 2576122 R identified by Glimmer3; hypothetical protein complement(2575580..2576122) Clostridium botulinum A3 str. Loch Maree 6153864 YP_001787698.1 CDS CLK_1763 NC_010520.1 2576216 2576338 R identified by Glimmer3; hypothetical protein complement(2576216..2576338) Clostridium botulinum A3 str. Loch Maree 6154608 YP_001787699.1 CDS CLK_1764 NC_010520.1 2576460 2577467 R identified by match to protein family HMM PF00144; beta-lactamase complement(2576460..2577467) Clostridium botulinum A3 str. Loch Maree 6153804 YP_001787700.1 CDS CLK_1765 NC_010520.1 2577468 2579840 R identified by match to protein family HMM PF00005; excinuclease ABC subunit A complement(2577468..2579840) Clostridium botulinum A3 str. Loch Maree 6152962 YP_001787701.1 CDS CLK_1766 NC_010520.1 2579860 2580768 R identified by match to protein family HMM PF00165; match to protein family HMM PF06445; AraC family transcriptional regulator complement(2579860..2580768) Clostridium botulinum A3 str. Loch Maree 6152172 YP_001787702.1 CDS CLK_1767 NC_010520.1 2581523 2582788 R identified by match to protein family HMM PF00266; aminotransferase complement(2581523..2582788) Clostridium botulinum A3 str. Loch Maree 6154446 YP_001787703.1 CDS CLK_1768 NC_010520.1 2583382 2583495 R identified by Glimmer3; hypothetical protein complement(2583382..2583495) Clostridium botulinum A3 str. Loch Maree 6154747 YP_001787704.1 CDS CLK_1769 NC_010520.1 2583904 2584713 R hypothetical protein complement(2583904..2584713) Clostridium botulinum A3 str. Loch Maree 6153572 YP_001787705.1 CDS gidA-1 NC_010520.1 2585014 2586291 D identified by match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM PF07992; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2585014..2586291 Clostridium botulinum A3 str. Loch Maree 6154245 YP_001787706.1 CDS purB NC_010520.1 2586342 2587772 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2586342..2587772) Clostridium botulinum A3 str. Loch Maree 6153385 YP_001787707.1 CDS CLK_1772 NC_010520.1 2588024 2588245 D identified by match to protein family HMM PF04070; hypothetical protein 2588024..2588245 Clostridium botulinum A3 str. Loch Maree 6154240 YP_001787708.1 CDS ptsH NC_010520.1 2588273 2588530 R identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr complement(2588273..2588530) Clostridium botulinum A3 str. Loch Maree 6152238 YP_001787709.1 CDS aspB NC_010520.1 2588641 2589834 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(2588641..2589834) Clostridium botulinum A3 str. Loch Maree 6152786 YP_001787710.1 CDS CLK_1775 NC_010520.1 2590522 2590878 R identified by match to protein family HMM PF00893; hypothetical protein complement(2590522..2590878) Clostridium botulinum A3 str. Loch Maree 6153853 YP_001787711.1 CDS CLK_1776 NC_010520.1 2590875 2592158 R hypothetical protein complement(2590875..2592158) Clostridium botulinum A3 str. Loch Maree 6153493 YP_001787712.1 CDS CLK_1777 NC_010520.1 2592177 2593043 R catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase complement(2592177..2593043) Clostridium botulinum A3 str. Loch Maree 6154509 YP_001787713.1 CDS spoVS NC_010520.1 2593206 2593466 R identified by match to protein family HMM PF04232; stage V sporulation protein S complement(2593206..2593466) Clostridium botulinum A3 str. Loch Maree 6151782 YP_001787714.1 CDS CLK_1779 NC_010520.1 2593605 2595146 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(2593605..2595146) Clostridium botulinum A3 str. Loch Maree 6152802 YP_001787715.1 CDS recA NC_010520.1 2595380 2596447 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2595380..2596447) Clostridium botulinum A3 str. Loch Maree 6151912 YP_001787716.1 CDS pgsA NC_010520.1 2596586 2597170 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2596586..2597170) Clostridium botulinum A3 str. Loch Maree 6154711 YP_001787717.1 CDS CLK_1782 NC_010520.1 2597154 2598491 R identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; RNA modification protein complement(2597154..2598491) Clostridium botulinum A3 str. Loch Maree 6154045 YP_001787718.1 CDS ftsK NC_010520.1 2598586 2600862 R identified by match to protein family HMM PF01580; DNA translocase FtsK complement(2598586..2600862) Clostridium botulinum A3 str. Loch Maree 6154854 YP_001787719.1 CDS clpP NC_010520.1 2601343 2602035 R identified by match to protein family HMM PF00574; Clp protease complement(2601343..2602035) Clostridium botulinum A3 str. Loch Maree 6154072 YP_001787720.1 CDS dapG NC_010520.1 2602284 2603489 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase complement(2602284..2603489) Clostridium botulinum A3 str. Loch Maree 6152260 YP_001787721.1 CDS CLK_1786 NC_010520.1 2603505 2603777 R identified by match to protein family HMM PF05239; match to protein family HMM TIGR02888; PRC-barrel domain-containing protein complement(2603505..2603777) Clostridium botulinum A3 str. Loch Maree 6151496 YP_001787722.1 CDS CLK_1787 NC_010520.1 2603854 2605155 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(2603854..2605155) Clostridium botulinum A3 str. Loch Maree 6154413 YP_001787723.1 CDS pnpA NC_010520.1 2605330 2607438 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase complement(2605330..2607438) Clostridium botulinum A3 str. Loch Maree 6154610 YP_001787724.1 CDS rpsO NC_010520.1 2607702 2608016 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2607702..2608016) Clostridium botulinum A3 str. Loch Maree 6152557 YP_001787725.1 CDS ribF NC_010520.1 2608098 2609018 R catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase complement(2608098..2609018) Clostridium botulinum A3 str. Loch Maree 6153388 YP_001787726.1 CDS truB NC_010520.1 2609031 2609900 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(2609031..2609900) Clostridium botulinum A3 str. Loch Maree 6152456 YP_001787727.1 CDS CLK_1792 NC_010520.1 2609901 2610863 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(2609901..2610863) Clostridium botulinum A3 str. Loch Maree 6153615 YP_001787728.1 CDS rbfA NC_010520.1 2610853 2611215 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(2610853..2611215) Clostridium botulinum A3 str. Loch Maree 6154973 YP_001787729.1 CDS infB NC_010520.1 2611245 2613311 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(2611245..2613311) Clostridium botulinum A3 str. Loch Maree 6151519 YP_001787730.1 CDS CLK_1795 NC_010520.1 2613329 2613643 R identified by match to protein family HMM PF01248; ribosomal protein L7Ae family protein complement(2613329..2613643) Clostridium botulinum A3 str. Loch Maree 6152719 YP_001787731.1 CDS CLK_1796 NC_010520.1 2613633 2613905 R identified by match to protein family HMM PF04296; hypothetical protein complement(2613633..2613905) Clostridium botulinum A3 str. Loch Maree 6154011 YP_001787732.1 CDS nusA NC_010520.1 2613965 2615338 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2613965..2615338) Clostridium botulinum A3 str. Loch Maree 6153581 YP_001787733.1 CDS CLK_1798 NC_010520.1 2615355 2615816 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(2615355..2615816) Clostridium botulinum A3 str. Loch Maree 6154423 YP_001787734.1 CDS polC NC_010520.1 2616121 2620419 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC complement(2616121..2620419) Clostridium botulinum A3 str. Loch Maree 6152251 YP_001787735.1 CDS ispG NC_010520.1 2620698 2621747 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2620698..2621747) Clostridium botulinum A3 str. Loch Maree 6154869 YP_001787736.1 CDS CLK_1801 NC_010520.1 2621883 2622893 R identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease complement(2621883..2622893) Clostridium botulinum A3 str. Loch Maree 6154026 YP_001787737.1 CDS dxr NC_010520.1 2622938 2624095 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2622938..2624095) Clostridium botulinum A3 str. Loch Maree 6152276 YP_001787738.1 CDS CLK_1803 NC_010520.1 2624125 2625105 R hypothetical protein complement(2624125..2625105) Clostridium botulinum A3 str. Loch Maree 6151435 YP_001787739.1 CDS CLK_1804 NC_010520.1 2625205 2625396 R identified by Glimmer3; hypothetical protein complement(2625205..2625396) Clostridium botulinum A3 str. Loch Maree 6154358 YP_001787740.1 CDS CLK_1805 NC_010520.1 2625465 2625608 R identified by Glimmer3; hypothetical protein complement(2625465..2625608) Clostridium botulinum A3 str. Loch Maree 6153523 YP_001787741.1 CDS cdsA NC_010520.1 2625751 2626548 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(2625751..2626548) Clostridium botulinum A3 str. Loch Maree 6151802 YP_001787742.1 CDS uppS NC_010520.1 2626573 2627331 R catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase complement(2626573..2627331) Clostridium botulinum A3 str. Loch Maree 6154899 YP_001787743.1 CDS frr NC_010520.1 2627398 2627952 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(2627398..2627952) Clostridium botulinum A3 str. Loch Maree 6153963 YP_001787744.1 CDS pyrH NC_010520.1 2627968 2628684 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(2627968..2628684) Clostridium botulinum A3 str. Loch Maree 6153299 YP_001787745.1 CDS CLK_1810 NC_010520.1 2628871 2628993 D identified by Glimmer3; hypothetical protein 2628871..2628993 Clostridium botulinum A3 str. Loch Maree 6152345 YP_001787746.1 CDS tsf NC_010520.1 2629059 2629982 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(2629059..2629982) Clostridium botulinum A3 str. Loch Maree 6152143 YP_001787747.1 CDS rpsB NC_010520.1 2630070 2630771 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(2630070..2630771) Clostridium botulinum A3 str. Loch Maree 6152122 YP_001787748.1 CDS codY NC_010520.1 2631008 2631784 R CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY complement(2631008..2631784) Clostridium botulinum A3 str. Loch Maree 6153223 YP_001787749.1 CDS topA NC_010520.1 2631991 2634093 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(2631991..2634093) Clostridium botulinum A3 str. Loch Maree 6152406 YP_001787750.1 CDS dprA NC_010520.1 2634465 2635550 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(2634465..2635550) Clostridium botulinum A3 str. Loch Maree 6151761 YP_001787751.1 CDS CLK_1816 NC_010520.1 2635750 2637273 D identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; Mg chelatase-like protein 2635750..2637273 Clostridium botulinum A3 str. Loch Maree 6151694 YP_001787752.1 CDS CLK_1817 NC_010520.1 2637289 2637660 D identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 2637289..2637660 Clostridium botulinum A3 str. Loch Maree 6154668 YP_001787753.1 CDS rnhB NC_010520.1 2638027 2638836 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(2638027..2638836) Clostridium botulinum A3 str. Loch Maree 6153843 YP_001787754.1 CDS rbgA NC_010520.1 2639133 2640011 R essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase complement(2639133..2640011) Clostridium botulinum A3 str. Loch Maree 6153576 YP_001787755.1 CDS lepB NC_010520.1 2640316 2640840 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(2640316..2640840) Clostridium botulinum A3 str. Loch Maree 6152387 YP_001787756.1 CDS rplS NC_010520.1 2640899 2641243 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2640899..2641243) Clostridium botulinum A3 str. Loch Maree 6153468 YP_001787757.1 CDS trmD NC_010520.1 2641395 2642117 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2641395..2642117) Clostridium botulinum A3 str. Loch Maree 6151987 YP_001787758.1 CDS rimM NC_010520.1 2642108 2642602 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2642108..2642602) Clostridium botulinum A3 str. Loch Maree 6152810 YP_001787759.1 CDS CLK_1824 NC_010520.1 2642715 2642942 R hypothetical protein complement(2642715..2642942) Clostridium botulinum A3 str. Loch Maree 6152975 YP_001787760.1 CDS rpsP NC_010520.1 2642963 2643211 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2642963..2643211) Clostridium botulinum A3 str. Loch Maree 6153772 YP_001787761.1 CDS ffh NC_010520.1 2643242 2644591 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(2643242..2644591) Clostridium botulinum A3 str. Loch Maree 6154316 YP_001787762.1 CDS CLK_1827 NC_010520.1 2644604 2644936 R identified by match to protein family HMM PF04297; DNA-binding protein complement(2644604..2644936) Clostridium botulinum A3 str. Loch Maree 6151397 YP_001787763.1 CDS ftsY NC_010520.1 2645160 2646071 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(2645160..2646071) Clostridium botulinum A3 str. Loch Maree 6151652 YP_001787764.1 CDS smc NC_010520.1 2646234 2649815 R identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR00650; match to protein family HMM TIGR02168; chromosome segregation protein SMC complement(2646234..2649815) Clostridium botulinum A3 str. Loch Maree 6153456 YP_001787765.1 CDS CLK_1830 NC_010520.1 2650074 2651165 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(2650074..2651165) Clostridium botulinum A3 str. Loch Maree 6152873 YP_001787766.1 CDS rnc NC_010520.1 2651158 2651862 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(2651158..2651862) Clostridium botulinum A3 str. Loch Maree 6151872 YP_001787767.1 CDS acpP NC_010520.1 2651988 2652221 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2651988..2652221) Clostridium botulinum A3 str. Loch Maree 6154968 YP_001787768.1 CDS plsX NC_010520.1 2652299 2653306 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(2652299..2653306) Clostridium botulinum A3 str. Loch Maree 6154421 YP_001787769.1 CDS rpmF NC_010520.1 2653396 2653578 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2653396..2653578) Clostridium botulinum A3 str. Loch Maree 6153077 YP_001787770.1 CDS CLK_1835 NC_010520.1 2653592 2654092 R identified by match to protein family HMM PF02620; ribosomal protein L32 family protein complement(2653592..2654092) Clostridium botulinum A3 str. Loch Maree 6152280 YP_001787771.1 CDS ackA NC_010520.1 2654210 2655403 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(2654210..2655403) Clostridium botulinum A3 str. Loch Maree 6151727 YP_001787772.1 CDS eutD NC_010520.1 2655543 2656541 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(2655543..2656541) Clostridium botulinum A3 str. Loch Maree 6153876 YP_001787773.1 CDS CLK_1838 NC_010520.1 2656876 2657754 R hypothetical protein complement(2656876..2657754) Clostridium botulinum A3 str. Loch Maree 6153471 YP_001787774.1 CDS CLK_1839 NC_010520.1 2657977 2658099 R identified by Glimmer3; hypothetical protein complement(2657977..2658099) Clostridium botulinum A3 str. Loch Maree 6153476 YP_001787775.1 CDS CLK_1840 NC_010520.1 2658121 2658840 R D-proline reductase subunit PrdB complement(2658121..2658840) Clostridium botulinum A3 str. Loch Maree 6153337 YP_001787776.1 CDS CLK_1842 NC_010520.1 2658870 2659145 R identified by Glimmer3; hypothetical protein complement(2658870..2659145) Clostridium botulinum A3 str. Loch Maree 6154110 YP_001787777.1 CDS prdA NC_010520.1 2659154 2661268 R identified by match to protein family HMM PF09338; D-proline reductase subunit PrdA complement(2659154..2661268) Clostridium botulinum A3 str. Loch Maree 6152569 YP_001787778.1 CDS CLK_1844 NC_010520.1 2661301 2661471 R identified by Glimmer3; hypothetical protein complement(2661301..2661471) Clostridium botulinum A3 str. Loch Maree 6154504 YP_001787779.1 CDS CLK_1845 NC_010520.1 2661493 2662611 R identified by match to protein family HMM PF01512; electron transport protein complement(2661493..2662611) Clostridium botulinum A3 str. Loch Maree 6151834 YP_001787780.1 CDS CLK_1846 NC_010520.1 2663372 2664271 R hypothetical protein complement(2663372..2664271) Clostridium botulinum A3 str. Loch Maree 6152915 YP_001787781.1 CDS CLK_1847 NC_010520.1 2664280 2664405 R identified by Glimmer3; hypothetical protein complement(2664280..2664405) Clostridium botulinum A3 str. Loch Maree 6153961 YP_001787782.1 CDS CLK_1848 NC_010520.1 2664576 2666594 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(2664576..2666594) Clostridium botulinum A3 str. Loch Maree 6153737 YP_001787783.1 CDS CLK_1849 NC_010520.1 2666657 2666776 R identified by Glimmer3; hypothetical protein complement(2666657..2666776) Clostridium botulinum A3 str. Loch Maree 6154771 YP_001787784.1 CDS CLK_1850 NC_010520.1 2666956 2667069 R identified by Glimmer3; hypothetical protein complement(2666956..2667069) Clostridium botulinum A3 str. Loch Maree 6151849 YP_001787785.1 CDS CLK_1851 NC_010520.1 2667549 2668634 R hypothetical protein complement(2667549..2668634) Clostridium botulinum A3 str. Loch Maree 6152665 YP_001787786.1 CDS CLK_1852 NC_010520.1 2668702 2669778 R hypothetical protein complement(2668702..2669778) Clostridium botulinum A3 str. Loch Maree 6153497 YP_001787787.1 CDS CLK_1853 NC_010520.1 2670322 2671767 D identified by match to protein family HMM PF00324; amino acid permease 2670322..2671767 Clostridium botulinum A3 str. Loch Maree 6154306 YP_001787788.1 CDS CLK_1854 NC_010520.1 2671902 2672789 R hypothetical protein complement(2671902..2672789) Clostridium botulinum A3 str. Loch Maree 6151438 YP_001787789.1 CDS CLK_1855 NC_010520.1 2673312 2674319 R identified by match to protein family HMM PF05544; proline racemase complement(2673312..2674319) Clostridium botulinum A3 str. Loch Maree 6153979 YP_001787790.1 CDS prdE NC_010520.1 2674333 2674803 R PrdE protein complement(2674333..2674803) Clostridium botulinum A3 str. Loch Maree 6152133 YP_001787791.1 CDS prdD NC_010520.1 2674817 2675593 R PrdD protein complement(2674817..2675593) Clostridium botulinum A3 str. Loch Maree 6154619 YP_001787792.1 CDS prdB NC_010520.1 2675934 2676659 R D-proline reductase subunit PrdB complement(2675934..2676659) Clostridium botulinum A3 str. Loch Maree 6153753 YP_001787793.1 CDS CLK_1860 NC_010520.1 2676735 2677010 R identified by Glimmer3; hypothetical protein complement(2676735..2677010) Clostridium botulinum A3 str. Loch Maree 6151960 YP_001787794.1 CDS CLK_1861 NC_010520.1 2677019 2679130 R D-proline reductase subunit PrdA complement(2677019..2679130) Clostridium botulinum A3 str. Loch Maree 6151896 YP_001787795.1 CDS CLK_1862 NC_010520.1 2679152 2679328 R identified by Glimmer3; hypothetical protein complement(2679152..2679328) Clostridium botulinum A3 str. Loch Maree 6154889 YP_001787796.1 CDS CLK_1863 NC_010520.1 2679350 2680468 R identified by match to protein family HMM PF01512; electron transport protein complement(2679350..2680468) Clostridium botulinum A3 str. Loch Maree 6154048 YP_001787797.1 CDS CLK_1864 NC_010520.1 2681109 2681771 R identified by Glimmer3; hypothetical protein complement(2681109..2681771) Clostridium botulinum A3 str. Loch Maree 6152308 YP_001787798.1 CDS CLK_1865 NC_010520.1 2681811 2683115 R identified by match to protein family HMM PF01512; electron transport protein complement(2681811..2683115) Clostridium botulinum A3 str. Loch Maree 6151518 YP_001787799.1 CDS CLK_1866 NC_010520.1 2683114 2683230 D identified by Glimmer3; hypothetical protein 2683114..2683230 Clostridium botulinum A3 str. Loch Maree 6151878 YP_001787800.1 CDS CLK_1867 NC_010520.1 2683708 2684235 R hypothetical protein complement(2683708..2684235) Clostridium botulinum A3 str. Loch Maree 6153620 YP_001787801.1 CDS CLK_1868 NC_010520.1 2684240 2684719 R hypothetical protein complement(2684240..2684719) Clostridium botulinum A3 str. Loch Maree 6152147 YP_001787802.1 CDS CLK_1869 NC_010520.1 2685196 2685624 R PrdA domain-containing protein complement(2685196..2685624) Clostridium botulinum A3 str. Loch Maree 6152938 YP_001787803.1 CDS CLK_1870 NC_010520.1 2685656 2686966 R identified by match to protein family HMM PF01512; electron transport protein complement(2685656..2686966) Clostridium botulinum A3 str. Loch Maree 6154260 YP_001787804.1 CDS CLK_1871 NC_010520.1 2687142 2688896 R identified by match to protein family HMM PF00158; match to protein family HMM PF00571; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM PF08448; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator complement(2687142..2688896) Clostridium botulinum A3 str. Loch Maree 6151370 YP_001787805.1 CDS CLK_1872 NC_010520.1 2689232 2690461 D identified by match to protein family HMM PF05636; hypothetical protein 2689232..2690461 Clostridium botulinum A3 str. Loch Maree 6151770 YP_001787806.1 CDS CLK_1873 NC_010520.1 2690521 2691687 D identified by match to protein family HMM PF07670; match to protein family HMM TIGR02871; nucleoside recognition domain-containing protein 2690521..2691687 Clostridium botulinum A3 str. Loch Maree 6152598 YP_001787807.1 CDS CLK_1874 NC_010520.1 2691688 2692212 R hypothetical protein complement(2691688..2692212) Clostridium botulinum A3 str. Loch Maree 6153762 YP_001787808.1 CDS coaD NC_010520.1 2692225 2692719 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2692225..2692719) Clostridium botulinum A3 str. Loch Maree 6154568 YP_001787809.1 CDS CLK_1876 NC_010520.1 2692721 2693278 R identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase complement(2692721..2693278) Clostridium botulinum A3 str. Loch Maree 6153318 YP_001787810.1 CDS recG NC_010520.1 2693540 2695579 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(2693540..2695579) Clostridium botulinum A3 str. Loch Maree 6154530 YP_001787811.1 CDS CLK_1878 NC_010520.1 2695748 2697373 R identified by match to protein family HMM PF02734; DAK2 domain-containing protein complement(2695748..2697373) Clostridium botulinum A3 str. Loch Maree 6151365 YP_001787812.1 CDS CLK_1879 NC_010520.1 2697388 2697738 R identified by match to protein family HMM PF03780; hypothetical protein complement(2697388..2697738) Clostridium botulinum A3 str. Loch Maree 6152877 YP_001787813.1 CDS rpmB NC_010520.1 2697938 2698129 D required for 70S ribosome assembly; 50S ribosomal protein L28 2697938..2698129 Clostridium botulinum A3 str. Loch Maree 6152576 YP_001787814.1 CDS CLK_1881 NC_010520.1 2698178 2698297 R identified by Glimmer3; hypothetical protein complement(2698178..2698297) Clostridium botulinum A3 str. Loch Maree 6154580 YP_001787815.1 CDS CLK_1882 NC_010520.1 2698375 2698530 R hypothetical protein complement(2698375..2698530) Clostridium botulinum A3 str. Loch Maree 6154186 YP_001787816.1 CDS CLK_1883 NC_010520.1 2698974 2699618 R identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine pyrophosphokinase complement(2698974..2699618) Clostridium botulinum A3 str. Loch Maree 6151535 YP_001787817.1 CDS rpe NC_010520.1 2699620 2700270 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(2699620..2700270) Clostridium botulinum A3 str. Loch Maree 6153952 YP_001787818.1 CDS rsgA NC_010520.1 2700264 2701142 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(2700264..2701142) Clostridium botulinum A3 str. Loch Maree 6154956 YP_001787819.1 CDS CLK_1886 NC_010520.1 2701349 2703301 R identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714; protein kinase complement(2701349..2703301) Clostridium botulinum A3 str. Loch Maree 6151819 YP_001787820.1 CDS CLK_1887 NC_010520.1 2703279 2704028 R identified by match to protein family HMM PF00481; protein phosphatase complement(2703279..2704028) Clostridium botulinum A3 str. Loch Maree 6152890 YP_001787821.1 CDS CLK_1888 NC_010520.1 2704047 2705075 R 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N complement(2704047..2705075) Clostridium botulinum A3 str. Loch Maree 6152500 YP_001787822.1 CDS sun NC_010520.1 2705087 2706415 R identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B complement(2705087..2706415) Clostridium botulinum A3 str. Loch Maree 6152435 YP_001787823.1 CDS CLK_1890 NC_010520.1 2706436 2707152 R identified by match to protein family HMM PF04298; neutral zinc metallopeptidase complement(2706436..2707152) Clostridium botulinum A3 str. Loch Maree 6151409 YP_001787824.1 CDS fmt NC_010520.1 2707305 2708246 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(2707305..2708246) Clostridium botulinum A3 str. Loch Maree 6152072 YP_001787825.1 CDS def NC_010520.1 2708263 2708706 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(2708263..2708706) Clostridium botulinum A3 str. Loch Maree 6153796 YP_001787826.1 CDS priA NC_010520.1 2708734 2710941 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(2708734..2710941) Clostridium botulinum A3 str. Loch Maree 6152738 YP_001787827.1 CDS coaBC NC_010520.1 2711329 2712516 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2711329..2712516) Clostridium botulinum A3 str. Loch Maree 6151719 YP_001787828.1 CDS rpoZ NC_010520.1 2712518 2712736 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2712518..2712736) Clostridium botulinum A3 str. Loch Maree 6154378 YP_001787829.1 CDS gmk NC_010520.1 2712717 2713346 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(2712717..2713346) Clostridium botulinum A3 str. Loch Maree 6152537 YP_001787830.1 CDS CLK_1897 NC_010520.1 2713346 2713621 R identified by match to protein family HMM PF04025; hypothetical protein complement(2713346..2713621) Clostridium botulinum A3 str. Loch Maree 6151557 YP_001787831.1 CDS CLK_1898 NC_010520.1 2713637 2714515 R identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein complement(2713637..2714515) Clostridium botulinum A3 str. Loch Maree 6154208 YP_001787832.1 CDS ansA NC_010520.1 2714709 2715710 R identified by match to protein family HMM PF00710; type II L-asparaginase complement(2714709..2715710) Clostridium botulinum A3 str. Loch Maree 6152992 YP_001787833.1 CDS spoIVA NC_010520.1 2716637 2718118 R identified by match to protein family HMM TIGR02836; stage IV sporulation protein A complement(2716637..2718118) Clostridium botulinum A3 str. Loch Maree 6152247 YP_001787834.1 CDS CLK_1901 NC_010520.1 2718524 2718874 D identified by Glimmer3; hypothetical protein 2718524..2718874 Clostridium botulinum A3 str. Loch Maree 6152927 YP_001787835.1 CDS gpsA NC_010520.1 2719080 2720078 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(2719080..2720078) Clostridium botulinum A3 str. Loch Maree 6152146 YP_001787836.1 CDS engA NC_010520.1 2720249 2721568 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(2720249..2721568) Clostridium botulinum A3 str. Loch Maree 6154669 YP_001787837.1 CDS CLK_1904 NC_010520.1 2721571 2722905 R identified by match to protein family HMM PF04459; hypothetical protein complement(2721571..2722905) Clostridium botulinum A3 str. Loch Maree 6153768 YP_001787838.1 CDS phoU NC_010520.1 2723322 2723975 R identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU complement(2723322..2723975) Clostridium botulinum A3 str. Loch Maree 6153441 YP_001787839.1 CDS pstB NC_010520.1 2724005 2724754 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2724005..2724754) Clostridium botulinum A3 str. Loch Maree 6152610 YP_001787840.1 CDS pstA NC_010520.1 2724767 2725651 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease complement(2724767..2725651) Clostridium botulinum A3 str. Loch Maree 6151668 YP_001787841.1 CDS pstC NC_010520.1 2725651 2726574 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease complement(2725651..2726574) Clostridium botulinum A3 str. Loch Maree 6154302 YP_001787842.1 CDS pstS NC_010520.1 2726782 2727654 R identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate ABC transporter substrate-binding protein complement(2726782..2727654) Clostridium botulinum A3 str. Loch Maree 6153901 YP_001787843.1 CDS CLK_1910 NC_010520.1 2727902 2729611 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; phosphate regulon sensor protein complement(2727902..2729611) Clostridium botulinum A3 str. Loch Maree 6153038 YP_001787844.1 CDS CLK_1911 NC_010520.1 2729623 2730321 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; phosphate regulon DNA-binding response regulator complement(2729623..2730321) Clostridium botulinum A3 str. Loch Maree 6151558 YP_001787845.1 CDS CLK_1912 NC_010520.1 2730332 2731051 R identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein complement(2730332..2731051) Clostridium botulinum A3 str. Loch Maree 6154489 YP_001787846.1 CDS nrdR NC_010520.1 2731268 2731723 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR complement(2731268..2731723) Clostridium botulinum A3 str. Loch Maree 6154491 YP_001787847.1 CDS CLK_1914 NC_010520.1 2731854 2732117 R identified by match to protein family HMM PF05239; match to protein family HMM TIGR02888; PRC-barrel domain-containing protein complement(2731854..2732117) Clostridium botulinum A3 str. Loch Maree 6153414 YP_001787848.1 CDS sigG NC_010520.1 2732263 2733036 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin; sporulation sigma factor SigG complement(2732263..2733036) Clostridium botulinum A3 str. Loch Maree 6151934 YP_001787849.1 CDS sigE NC_010520.1 2733111 2733818 R sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation; sporulation sigma factor SigE complement(2733111..2733818) Clostridium botulinum A3 str. Loch Maree 6154651 YP_001787850.1 CDS spoIIGA NC_010520.1 2733830 2734627 R identified by match to protein family HMM PF03419; match to protein family HMM TIGR02854; sporulation factor SpoIIGA complement(2733830..2734627) Clostridium botulinum A3 str. Loch Maree 6153104 YP_001787851.1 CDS ftsZ NC_010520.1 2734940 2736049 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2734940..2736049) Clostridium botulinum A3 str. Loch Maree 6151408 YP_001787852.1 CDS ftsA NC_010520.1 2736072 2737325 R identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA complement(2736072..2737325) Clostridium botulinum A3 str. Loch Maree 6154936 YP_001787853.1 CDS CLK_1920 NC_010520.1 2737482 2738756 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2737482..2738756) Clostridium botulinum A3 str. Loch Maree 6153851 YP_001787854.1 CDS CLK_1921 NC_010520.1 2739194 2739337 D identified by Glimmer3; hypothetical protein 2739194..2739337 Clostridium botulinum A3 str. Loch Maree 6152816 YP_001787855.1 CDS pilT NC_010520.1 2739416 2740468 R identified by match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein complement(2739416..2740468) Clostridium botulinum A3 str. Loch Maree 6151791 YP_001787856.1 CDS aroE NC_010520.1 2740470 2741246 R identified by match to protein family HMM PF01488; match to protein family HMM PF08501; shikimate 5-dehydrogenase complement(2740470..2741246) Clostridium botulinum A3 str. Loch Maree 6154925 YP_001787857.1 CDS CLK_1924 NC_010520.1 2741385 2742089 R sigma-28; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell after engulfment; sporulation sigma factor SigK complement(2741385..2742089) Clostridium botulinum A3 str. Loch Maree 6153967 YP_001787858.1 CDS CLK_1925 NC_010520.1 2742513 2742692 R hypothetical protein complement(2742513..2742692) Clostridium botulinum A3 str. Loch Maree 6152370 YP_001787859.1 CDS CLK_1926 NC_010520.1 2743136 2743273 R hypothetical protein complement(2743136..2743273) Clostridium botulinum A3 str. Loch Maree 6151379 YP_001787860.1 CDS CLK_1927 NC_010520.1 2744123 2744296 R identified by Glimmer3; hypothetical protein complement(2744123..2744296) Clostridium botulinum A3 str. Loch Maree 6154463 YP_001787861.1 CDS CLK_1928 NC_010520.1 2745083 2745751 R identified by match to protein family HMM TIGR02271; hypothetical protein complement(2745083..2745751) Clostridium botulinum A3 str. Loch Maree 6153466 YP_001787862.1 CDS CLK_1929 NC_010520.1 2745830 2746306 R identified by match to protein family HMM TIGR02271; hypothetical protein complement(2745830..2746306) Clostridium botulinum A3 str. Loch Maree 6154807 YP_001787863.1 CDS CLK_1930 NC_010520.1 2746620 2747018 R identified by match to protein family HMM PF00583; ribosomal-protein-alanine acetyltransferase complement(2746620..2747018) Clostridium botulinum A3 str. Loch Maree 6151992 YP_001787864.1 CDS CLK_1931 NC_010520.1 2747254 2747523 R phage protein complement(2747254..2747523) Clostridium botulinum A3 str. Loch Maree 6151332 YP_001787865.1 CDS CLK_1932 NC_010520.1 2747747 2748031 R identified by Glimmer3; hypothetical protein complement(2747747..2748031) Clostridium botulinum A3 str. Loch Maree 6152322 YP_001787866.1 CDS CLK_1933 NC_010520.1 2748042 2748845 R hypothetical protein complement(2748042..2748845) Clostridium botulinum A3 str. Loch Maree 6153634 YP_001787867.1 CDS CLK_1934 NC_010520.1 2748826 2749629 R identified by match to protein family HMM PF03837; match to protein family HMM TIGR00616; recombinase complement(2748826..2749629) Clostridium botulinum A3 str. Loch Maree 6154408 YP_001787868.1 CDS CLK_1935 NC_010520.1 2749793 2749924 R identified by Glimmer3; hypothetical protein complement(2749793..2749924) Clostridium botulinum A3 str. Loch Maree 6151910 YP_001787869.1 CDS CLK_1936 NC_010520.1 2749925 2750056 R phage protein complement(2749925..2750056) Clostridium botulinum A3 str. Loch Maree 6152741 YP_001787870.1 CDS CLK_1937 NC_010520.1 2750714 2750866 D identified by Glimmer3; hypothetical protein 2750714..2750866 Clostridium botulinum A3 str. Loch Maree 6152095 YP_001787871.1 CDS CLK_1938 NC_010520.1 2751083 2752753 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(2751083..2752753) Clostridium botulinum A3 str. Loch Maree 6152726 YP_001787872.1 CDS udk NC_010520.1 2752839 2753459 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(2752839..2753459) Clostridium botulinum A3 str. Loch Maree 6154372 YP_001787873.1 CDS CLK_1940 NC_010520.1 2753607 2754833 R identified by match to protein family HMM PF01136; U32 family peptidase complement(2753607..2754833) Clostridium botulinum A3 str. Loch Maree 6153247 YP_001787874.1 CDS CLK_1941 NC_010520.1 2754826 2755482 R identified by match to protein family HMM PF01596; O-methyltransferase complement(2754826..2755482) Clostridium botulinum A3 str. Loch Maree 6151361 YP_001787875.1 CDS CLK_1942 NC_010520.1 2755565 2756596 R identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein complement(2755565..2756596) Clostridium botulinum A3 str. Loch Maree 6154461 YP_001787876.1 CDS typA NC_010520.1 2756674 2758500 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA complement(2756674..2758500) Clostridium botulinum A3 str. Loch Maree 6153904 YP_001787877.1 CDS CLK_1944 NC_010520.1 2759146 2760855 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; match to protein family HMM TIGR00649; RNA-metabolizing metallo-beta-lactamase complement(2759146..2760855) Clostridium botulinum A3 str. Loch Maree 6152374 YP_001787878.1 CDS CLK_1945 NC_010520.1 2760903 2761355 R identified by match to protein family HMM PF01475; FUR family transcriptional regulator complement(2760903..2761355) Clostridium botulinum A3 str. Loch Maree 6153144 YP_001787879.1 CDS CLK_1946 NC_010520.1 2761474 2761731 R identified by match to protein family HMM PF06949; hypothetical protein complement(2761474..2761731) Clostridium botulinum A3 str. Loch Maree 6152025 YP_001787880.1 CDS CLK_1947 NC_010520.1 2761745 2762158 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2761745..2762158) Clostridium botulinum A3 str. Loch Maree 6154712 YP_001787881.1 CDS CLK_1948 NC_010520.1 2762365 2762616 R identified by match to protein family HMM PF06135; hypothetical protein complement(2762365..2762616) Clostridium botulinum A3 str. Loch Maree 6153641 YP_001787882.1 CDS alaS NC_010520.1 2762730 2765369 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2762730..2765369) Clostridium botulinum A3 str. Loch Maree 6154212 YP_001787883.1 CDS CLK_1950 NC_010520.1 2765867 2766895 R identified by match to protein family HMM PF01594; hypothetical protein complement(2765867..2766895) Clostridium botulinum A3 str. Loch Maree 6151377 YP_001787884.1 CDS CLK_1951 NC_010520.1 2766908 2767396 R PRC-barrel domain-containing protein complement(2766908..2767396) Clostridium botulinum A3 str. Loch Maree 6152354 YP_001787885.1 CDS CLK_1952 NC_010520.1 2767578 2768006 R identified by match to protein family HMM PF01592; match to protein family HMM TIGR03419; iron-sulfur cluster assembly protein complement(2767578..2768006) Clostridium botulinum A3 str. Loch Maree 6153636 YP_001787886.1 CDS iscS NC_010520.1 2768008 2769201 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR03402; cysteine desulfurase complement(2768008..2769201) Clostridium botulinum A3 str. Loch Maree 6151865 YP_001787887.1 CDS CLK_1954 NC_010520.1 2769194 2769640 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrF2 family protein complement(2769194..2769640) Clostridium botulinum A3 str. Loch Maree 6152914 YP_001787888.1 CDS CLK_1955 NC_010520.1 2769860 2771110 R identified by match to protein family HMM PF00004; recombination factor protein RarA complement(2769860..2771110) Clostridium botulinum A3 str. Loch Maree 6153993 YP_001787889.1 CDS hisK NC_010520.1 2771457 2772224 R identified by match to protein family HMM PF02811; match to protein family HMM TIGR01856; histidinol-phosphatase complement(2771457..2772224) Clostridium botulinum A3 str. Loch Maree 6154830 YP_001787890.1 CDS CLK_1957 NC_010520.1 2772539 2773447 R identified by match to protein family HMM PF03547; auxin efflux carrier family protein complement(2772539..2773447) Clostridium botulinum A3 str. Loch Maree 6151887 YP_001787891.1 CDS CLK_1958 NC_010520.1 2773555 2774421 R identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein complement(2773555..2774421) Clostridium botulinum A3 str. Loch Maree 6152884 YP_001787892.1 CDS CLK_1959 NC_010520.1 2774749 2775333 D identified by match to protein family HMM PF01206; match to protein family HMM TIGR03527; hypothetical protein 2774749..2775333 Clostridium botulinum A3 str. Loch Maree 6154415 YP_001787893.1 CDS CLK_1960 NC_010520.1 2775585 2776574 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(2775585..2776574) Clostridium botulinum A3 str. Loch Maree 6154784 YP_001787894.1 CDS CLK_1961 NC_010520.1 2776696 2778063 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(2776696..2778063) Clostridium botulinum A3 str. Loch Maree 6153995 YP_001787895.1 CDS CLK_1962 NC_010520.1 2778809 2780143 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(2778809..2780143) Clostridium botulinum A3 str. Loch Maree 6153139 YP_001787896.1 CDS CLK_1963 NC_010520.1 2780520 2781173 D hypothetical protein 2780520..2781173 Clostridium botulinum A3 str. Loch Maree 6152060 YP_001787897.1 CDS CLK_1964 NC_010520.1 2781311 2781787 R copper amine oxidase domain-containing protein complement(2781311..2781787) Clostridium botulinum A3 str. Loch Maree 6154250 YP_001787898.1 CDS CLK_1965 NC_010520.1 2782151 2785912 R identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase complement(2782151..2785912) Clostridium botulinum A3 str. Loch Maree 6153584 YP_001787899.1 CDS CLK_1966 NC_010520.1 2786110 2787459 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2786110..2787459) Clostridium botulinum A3 str. Loch Maree 6152504 YP_001787900.1 CDS CLK_1967 NC_010520.1 2787456 2789933 R identified by match to protein family HMM PF00391; match to protein family HMM PF01326; phosphoenolpyruvate synthase complement(2787456..2789933) Clostridium botulinum A3 str. Loch Maree 6152822 YP_001787901.1 CDS CLK_1968 NC_010520.1 2789938 2790213 R acyl carrier protein complement(2789938..2790213) Clostridium botulinum A3 str. Loch Maree 6151816 YP_001787902.1 CDS CLK_1969 NC_010520.1 2790216 2791757 R acyl-CoA synthetase complement(2790216..2791757) Clostridium botulinum A3 str. Loch Maree 6152640 YP_001787903.1 CDS CLK_1970 NC_010520.1 2791774 2792784 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2791774..2792784) Clostridium botulinum A3 str. Loch Maree 6151566 YP_001787904.1 CDS CLK_1971 NC_010520.1 2792794 2793681 R bacT protein complement(2792794..2793681) Clostridium botulinum A3 str. Loch Maree 6154265 YP_001787905.1 CDS CLK_1972 NC_010520.1 2793722 2795551 R identified by match to protein family HMM PF00501; match to protein family HMM PF00550; nonribosomal peptide synthetase complement(2793722..2795551) Clostridium botulinum A3 str. Loch Maree 6153386 YP_001787906.1 CDS CLK_1973 NC_010520.1 2795591 2796103 R identified by match to protein family HMM PF00583; acetyltransferase complement(2795591..2796103) Clostridium botulinum A3 str. Loch Maree 6153157 YP_001787907.1 CDS CLK_1974 NC_010520.1 2796107 2796355 R D-alanyl carrier protein-like protein complement(2796107..2796355) Clostridium botulinum A3 str. Loch Maree 6152112 YP_001787908.1 CDS CLK_1975 NC_010520.1 2796364 2797380 R hypothetical protein complement(2796364..2797380) Clostridium botulinum A3 str. Loch Maree 6154773 YP_001787909.1 CDS CLK_1976 NC_010520.1 2797377 2798570 R seryl-tRNA synthetase complement(2797377..2798570) Clostridium botulinum A3 str. Loch Maree 6153802 YP_001787910.1 CDS CLK_1977 NC_010520.1 2798589 2799329 R identified by Glimmer3; hypothetical protein complement(2798589..2799329) Clostridium botulinum A3 str. Loch Maree 6153125 YP_001787911.1 CDS argF NC_010520.1 2799796 2800797 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(2799796..2800797) Clostridium botulinum A3 str. Loch Maree 6152089 YP_001787912.1 CDS arcC NC_010520.1 2800892 2801836 R catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(2800892..2801836) Clostridium botulinum A3 str. Loch Maree 6154577 YP_001787913.1 CDS glyA NC_010520.1 2802400 2803641 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2802400..2803641) Clostridium botulinum A3 str. Loch Maree 6154466 YP_001787914.1 CDS CLK_1981 NC_010520.1 2803815 2804585 D identified by match to protein family HMM PF06738; hypothetical protein 2803815..2804585 Clostridium botulinum A3 str. Loch Maree 6153070 YP_001787915.1 CDS CLK_1982 NC_010520.1 2804582 2805055 D hypothetical protein 2804582..2805055 Clostridium botulinum A3 str. Loch Maree 6153911 YP_001787916.1 CDS CLK_1983 NC_010520.1 2805136 2805405 R identified by match to protein family HMM PF02583; hypothetical protein complement(2805136..2805405) Clostridium botulinum A3 str. Loch Maree 6154191 YP_001787917.1 CDS CLK_1984 NC_010520.1 2805604 2806428 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; hydrolase complement(2805604..2806428) Clostridium botulinum A3 str. Loch Maree 6152202 YP_001787918.1 CDS CLK_1985 NC_010520.1 2806541 2807017 D lipoprotein 2806541..2807017 Clostridium botulinum A3 str. Loch Maree 6152599 YP_001787919.1 CDS CLK_1986 NC_010520.1 2807429 2812294 D identified by Glimmer3; hypothetical protein 2807429..2812294 Clostridium botulinum A3 str. Loch Maree 6153425 YP_001787920.1 CDS CLK_1987 NC_010520.1 2812369 2813592 D identified by Glimmer3; hypothetical protein 2812369..2813592 Clostridium botulinum A3 str. Loch Maree 6151917 YP_001787921.1 CDS CLK_1988 NC_010520.1 2813745 2814800 D identified by Glimmer3; hypothetical protein 2813745..2814800 Clostridium botulinum A3 str. Loch Maree 6152753 YP_001787922.2 CDS CLK_1989 NC_010520.1 2815129 2815821 D hypothetical protein 2815129..2815821 Clostridium botulinum A3 str. Loch Maree 6151454 YP_001787923.1 CDS CLK_1990 NC_010520.1 2816125 2817660 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 1 complement(2816125..2817660) Clostridium botulinum A3 str. Loch Maree 6152423 YP_001787924.1 CDS CLK_1991 NC_010520.1 2817651 2818586 R identified by match to protein family HMM PF01544; magnesium and cobalt transport protein CorA complement(2817651..2818586) Clostridium botulinum A3 str. Loch Maree 6153902 YP_001787925.1 CDS CLK_1992 NC_010520.1 2819062 2819616 R identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase complement(2819062..2819616) Clostridium botulinum A3 str. Loch Maree 6154938 YP_001787926.1 CDS hprK NC_010520.1 2819609 2820532 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2819609..2820532) Clostridium botulinum A3 str. Loch Maree 6154554 YP_001787927.1 CDS CLK_1994 NC_010520.1 2820564 2820752 R identified by match to protein family HMM PF05979; hypothetical protein complement(2820564..2820752) Clostridium botulinum A3 str. Loch Maree 6152841 YP_001787928.1 CDS CLK_1995 NC_010520.1 2820924 2821661 R identified by match to protein family HMM PF09335; DedA family protein complement(2820924..2821661) Clostridium botulinum A3 str. Loch Maree 6152445 YP_001787929.1 CDS CLK_1996 NC_010520.1 2821627 2822346 R identified by match to protein family HMM PF09335; DedA family protein complement(2821627..2822346) Clostridium botulinum A3 str. Loch Maree 6153540 YP_001787930.1 CDS CLK_1997 NC_010520.1 2822456 2823601 R identified by match to protein family HMM PF02754; hypothetical protein complement(2822456..2823601) Clostridium botulinum A3 str. Loch Maree 6154125 YP_001787931.1 CDS CLK_1998 NC_010520.1 2823601 2824599 R hypothetical protein complement(2823601..2824599) Clostridium botulinum A3 str. Loch Maree 6152198 YP_001787932.1 CDS CLK_1999 NC_010520.1 2824577 2825278 R hypothetical protein complement(2824577..2825278) Clostridium botulinum A3 str. Loch Maree 6154033 YP_001787933.1 CDS CLK_2000 NC_010520.1 2825275 2825955 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2825275..2825955) Clostridium botulinum A3 str. Loch Maree 6152673 YP_001787934.1 CDS CLK_2001 NC_010520.1 2826066 2826197 D identified by Glimmer3; hypothetical protein 2826066..2826197 Clostridium botulinum A3 str. Loch Maree 6151941 YP_001787935.1 CDS glpX NC_010520.1 2826352 2827326 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(2826352..2827326) Clostridium botulinum A3 str. Loch Maree 6154272 YP_001787936.1 CDS CLK_2003 NC_010520.1 2827810 2827986 D identified by Glimmer3; hypothetical protein 2827810..2827986 Clostridium botulinum A3 str. Loch Maree 6153228 YP_001787937.1 CDS CLK_2004 NC_010520.1 2828018 2828419 R hypothetical protein complement(2828018..2828419) Clostridium botulinum A3 str. Loch Maree 6152586 YP_001787938.1 CDS CLK_2005 NC_010520.1 2829004 2830173 R identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase/flavodoxin complement(2829004..2830173) Clostridium botulinum A3 str. Loch Maree 6151723 YP_001787939.1 CDS CLK_2006 NC_010520.1 2830487 2830993 R hypothetical protein complement(2830487..2830993) Clostridium botulinum A3 str. Loch Maree 6154113 YP_001787940.1 CDS CLK_2007 NC_010520.1 2832035 2832898 R identified by match to protein family HMM PF01156; IUNH family nucleoside hydrolase complement(2832035..2832898) Clostridium botulinum A3 str. Loch Maree 6153319 YP_001787941.1 CDS def NC_010520.1 2832916 2833452 R identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase complement(2832916..2833452) Clostridium botulinum A3 str. Loch Maree 6153918 YP_001787942.1 CDS CLK_2009 NC_010520.1 2833669 2834319 R produces ATP from ADP in the presence of a proton gradient across the membrane; the D subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit D complement(2833669..2834319) Clostridium botulinum A3 str. Loch Maree 6154247 YP_001787943.1 CDS CLK_2010 NC_010520.1 2834348 2835733 R produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B complement(2834348..2835733) Clostridium botulinum A3 str. Loch Maree 6152936 YP_001787944.1 CDS CLK_2011 NC_010520.1 2835726 2837504 R produces ATP from ADP in the presence of a proton gradient across the membrane; the A subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit A complement(2835726..2837504) Clostridium botulinum A3 str. Loch Maree 6152144 YP_001787945.1 CDS CLK_2012 NC_010520.1 2837518 2837826 R produces ATP from ADP in the presence of a proton gradient across the membrane; the F subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit F complement(2837518..2837826) Clostridium botulinum A3 str. Loch Maree 6153760 YP_001787946.1 CDS CLK_2013 NC_010520.1 2837819 2838820 R produces ATP from ADP in the presence of a proton gradient across the membrane; the C subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit C complement(2837819..2838820) Clostridium botulinum A3 str. Loch Maree 6154674 YP_001787947.1 CDS CLK_2014 NC_010520.1 2838835 2839434 R identified by match to protein family HMM PF01991; V-type ATPase, E subunit complement(2838835..2839434) Clostridium botulinum A3 str. Loch Maree 6154473 YP_001787948.1 CDS CLK_2015 NC_010520.1 2839473 2839949 R produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; V-type ATP synthase subunit K complement(2839473..2839949) Clostridium botulinum A3 str. Loch Maree 6151583 YP_001787949.1 CDS CLK_2016 NC_010520.1 2839962 2841923 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I is part of the membrane proton channel.; V-type ATP synthase subunit I complement(2839962..2841923) Clostridium botulinum A3 str. Loch Maree 6152380 YP_001787950.1 CDS CLK_2017 NC_010520.1 2841910 2842236 R V-type ATPase, G subunit complement(2841910..2842236) Clostridium botulinum A3 str. Loch Maree 6153200 YP_001787951.1 CDS CLK_2018 NC_010520.1 2842559 2844244 R identified by match to protein family HMM PF02310; match to protein family HMM PF04055; B12-binding Fe-S oxidoreductase complement(2842559..2844244) Clostridium botulinum A3 str. Loch Maree 6154714 YP_001787952.1 CDS CLK_2019 NC_010520.1 2844219 2844764 R hypothetical protein complement(2844219..2844764) Clostridium botulinum A3 str. Loch Maree 6152843 YP_001787953.1 CDS CLK_2020 NC_010520.1 2844967 2845686 R identified by match to protein family HMM PF00882; phospholipase C complement(2844967..2845686) Clostridium botulinum A3 str. Loch Maree 6153709 YP_001787954.1 CDS CLK_2021 NC_010520.1 2845708 2846907 R hypothetical protein complement(2845708..2846907) Clostridium botulinum A3 str. Loch Maree 6154539 YP_001787955.1 CDS CLK_2022 NC_010520.1 2846946 2849492 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; ATPase P complement(2846946..2849492) Clostridium botulinum A3 str. Loch Maree 6151455 YP_001787956.1 CDS CLK_2023 NC_010520.1 2850037 2851680 D catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 2850037..2851680 Clostridium botulinum A3 str. Loch Maree 6152337 YP_001787957.1 CDS CLK_2024 NC_010520.1 2851896 2852474 R identified by Glimmer3; hypothetical protein complement(2851896..2852474) Clostridium botulinum A3 str. Loch Maree 6153487 YP_001787958.1 CDS flgG NC_010520.1 2852834 2853625 R makes up the distal portion of the flagellar basal body rod; the Clostridia have 2 adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2852834..2853625) Clostridium botulinum A3 str. Loch Maree 6154154 YP_001787959.1 CDS flgG NC_010520.1 2853679 2854446 R makes up the distal portion of the flagellar basal body rod; the Clostridia have two adjacent copies of the FlgG gene; flagellar basal body rod protein FlgG complement(2853679..2854446) Clostridium botulinum A3 str. Loch Maree 6151467 YP_001787960.1 CDS CLK_2027 NC_010520.1 2854512 2854628 R hypothetical protein complement(2854512..2854628) Clostridium botulinum A3 str. Loch Maree 6152039 YP_001787961.1 CDS CLK_2028 NC_010520.1 2854706 2855344 R hypothetical protein complement(2854706..2855344) Clostridium botulinum A3 str. Loch Maree 6153064 YP_001787962.1 CDS fliA NC_010520.1 2855373 2856101 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; RNA polymerase sigma factor for flagellar operon FliA complement(2855373..2856101) Clostridium botulinum A3 str. Loch Maree 6152556 YP_001787963.1 CDS CLK_2030 NC_010520.1 2856115 2856774 R identified by match to protein family HMM PF07238; hypothetical protein complement(2856115..2856774) Clostridium botulinum A3 str. Loch Maree 6153353 YP_001787964.1 CDS flhG NC_010520.1 2856789 2857649 R identified by match to protein family HMM PF01656; flagellar biosynthesis protein FlhG complement(2856789..2857649) Clostridium botulinum A3 str. Loch Maree 6154196 YP_001787965.1 CDS flhF NC_010520.1 2857643 2858869 R positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF complement(2857643..2858869) Clostridium botulinum A3 str. Loch Maree 6152221 YP_001787966.1 CDS flhA NC_010520.1 2858866 2860932 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(2858866..2860932) Clostridium botulinum A3 str. Loch Maree 6153025 YP_001787967.1 CDS CLK_2034 NC_010520.1 2860960 2862789 R FlhB is a membrane protein responsible for substrate specificity in switching from rod/hook-type export to filament-type export; FliR is required for export of flagellar proteins, although a specific role has not yet been determined; bifunctional flagellar biosynthesis protein FliR/FlhB complement(2860960..2862789) Clostridium botulinum A3 str. Loch Maree 6153833 YP_001787968.1 CDS fliQ NC_010520.1 2862823 2863092 R identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402; flagellar biosynthesis protein FliQ complement(2862823..2863092) Clostridium botulinum A3 str. Loch Maree 6154676 YP_001787969.1 CDS fliP NC_010520.1 2863104 2863880 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(2863104..2863880) Clostridium botulinum A3 str. Loch Maree 6151748 YP_001787970.1 CDS CLK_2037 NC_010520.1 2863864 2864271 R identified by match to protein family HMM TIGR03500; flagellar biosynthesis domain-containing protein complement(2863864..2864271) Clostridium botulinum A3 str. Loch Maree 6152589 YP_001787971.1 CDS fliL NC_010520.1 2864344 2864865 R identified by match to protein family HMM PF03748; flagellar basal body protein FliL complement(2864344..2864865) Clostridium botulinum A3 str. Loch Maree 6153313 YP_001787972.1 CDS motB NC_010520.1 2864862 2865605 R identified by match to protein family HMM PF00691; chemotaxis protein MotB complement(2864862..2865605) Clostridium botulinum A3 str. Loch Maree 6153253 YP_001787973.1 CDS motA NC_010520.1 2865598 2866410 R identified by match to protein family HMM PF01618; chemotaxis protein MotA complement(2865598..2866410) Clostridium botulinum A3 str. Loch Maree 6154353 YP_001787974.1 CDS CLK_2041 NC_010520.1 2866407 2866616 R identified by match to protein family HMM PF06289; flagellar protein FlbD complement(2866407..2866616) Clostridium botulinum A3 str. Loch Maree 6151939 YP_001787975.1 CDS flgE NC_010520.1 2866850 2867887 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR03506; flagellar hook protein flgE complement(2866850..2867887) Clostridium botulinum A3 str. Loch Maree 6152754 YP_001787976.1 CDS CLK_2043 NC_010520.1 2867969 2868388 R identified by match to protein family HMM TIGR02530; flagellar operon protein complement(2867969..2868388) Clostridium botulinum A3 str. Loch Maree 6151848 YP_001787977.1 CDS flgD NC_010520.1 2868403 2869200 R identified by match to protein family HMM PF03963; flagellar hook capping protein complement(2868403..2869200) Clostridium botulinum A3 str. Loch Maree 6152757 YP_001787978.1 CDS fliK NC_010520.1 2869230 2870618 R identified by match to protein family HMM PF02120; flagellar hook-length control protein complement(2869230..2870618) Clostridium botulinum A3 str. Loch Maree 6152325 YP_001787979.1 CDS CLK_2046 NC_010520.1 2870624 2871061 R identified by match to protein family HMM TIGR02473; flagellar protein FliJ complement(2870624..2871061) Clostridium botulinum A3 str. Loch Maree 6154796 YP_001787980.1 CDS fliI NC_010520.1 2871167 2872483 R identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; match to protein family HMM TIGR03496; match to protein family HMM TIGR03497; flagellar protein export ATPase FliI complement(2871167..2872483) Clostridium botulinum A3 str. Loch Maree 6154411 YP_001787981.1 CDS fliH NC_010520.1 2872523 2873311 R flagellar assembly protein FliH complement(2872523..2873311) Clostridium botulinum A3 str. Loch Maree 6151506 YP_001787982.1 CDS fliG NC_010520.1 2873295 2874308 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(2873295..2874308) Clostridium botulinum A3 str. Loch Maree 6151512 YP_001787983.1 CDS fliF NC_010520.1 2874315 2875895 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(2874315..2875895) Clostridium botulinum A3 str. Loch Maree 6153007 YP_001787984.1 CDS fliE NC_010520.1 2875911 2876225 R forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE complement(2875911..2876225) Clostridium botulinum A3 str. Loch Maree 6153408 YP_001787985.1 CDS flgB NC_010520.1 2876768 2877169 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal-body rod protein FlgB complement(2876768..2877169) Clostridium botulinum A3 str. Loch Maree 6153594 YP_001787986.1 CDS CLK_2055 NC_010520.1 2877742 2878596 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2877742..2878596) Clostridium botulinum A3 str. Loch Maree 6151595 YP_001787987.1 CDS CLK_2056 NC_010520.1 2878741 2879109 R hypothetical protein complement(2878741..2879109) Clostridium botulinum A3 str. Loch Maree 6152637 YP_001787988.1 CDS argH NC_010520.1 2879649 2880971 R catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase complement(2879649..2880971) Clostridium botulinum A3 str. Loch Maree 6152427 YP_001787989.1 CDS argG NC_010520.1 2880993 2882186 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(2880993..2882186) Clostridium botulinum A3 str. Loch Maree 6153459 YP_001787990.1 CDS CLK_2059 NC_010520.1 2882480 2882818 R hypothetical protein complement(2882480..2882818) Clostridium botulinum A3 str. Loch Maree 6152088 YP_001787991.1 CDS CLK_2060 NC_010520.1 2882841 2883161 R hypothetical protein complement(2882841..2883161) Clostridium botulinum A3 str. Loch Maree 6151539 YP_001787992.1 CDS cls NC_010520.1 2883365 2884795 R identified by match to protein family HMM PF00614; cardiolipin synthetase complement(2883365..2884795) Clostridium botulinum A3 str. Loch Maree 6153734 YP_001787993.1 CDS CLK_2062 NC_010520.1 2885122 2886012 D hypothetical protein 2885122..2886012 Clostridium botulinum A3 str. Loch Maree 6152951 YP_001787994.1 CDS CLK_2063 NC_010520.1 2886132 2886317 R hypothetical protein complement(2886132..2886317) Clostridium botulinum A3 str. Loch Maree 6154377 YP_001787995.1 CDS CLK_2064 NC_010520.1 2886594 2887049 R identified by match to protein family HMM PF04892; VanZ family protein complement(2886594..2887049) Clostridium botulinum A3 str. Loch Maree 6153563 YP_001787996.1 CDS CLK_2065 NC_010520.1 2887295 2888725 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(2887295..2888725) Clostridium botulinum A3 str. Loch Maree 6152295 YP_001787997.1 CDS CLK_2066 NC_010520.1 2888765 2889682 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase complement(2888765..2889682) Clostridium botulinum A3 str. Loch Maree 6151375 YP_001787998.1 CDS CLK_2067 NC_010520.1 2889711 2890778 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; neuB family protein complement(2889711..2890778) Clostridium botulinum A3 str. Loch Maree 6151360 YP_001787999.1 CDS CLK_2068 NC_010520.1 2890811 2892472 R identified by match to protein family HMM PF02348; cytidyltransferase-like protein complement(2890811..2892472) Clostridium botulinum A3 str. Loch Maree 6154063 YP_001788000.1 CDS CLK_2069 NC_010520.1 2892487 2893656 R hypothetical protein complement(2892487..2893656) Clostridium botulinum A3 str. Loch Maree 6153957 YP_001788001.1 CDS CLK_2070 NC_010520.1 2893690 2894643 R exopolysaccharide biosynthesis protein complement(2893690..2894643) Clostridium botulinum A3 str. Loch Maree 6153117 YP_001788002.1 CDS CLK_2071 NC_010520.1 2894670 2895440 R exopolysaccharide biosynthesis protein complement(2894670..2895440) Clostridium botulinum A3 str. Loch Maree 6154171 YP_001788003.1 CDS glf NC_010520.1 2895440 2896540 R identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase complement(2895440..2896540) Clostridium botulinum A3 str. Loch Maree 6153399 YP_001788004.1 CDS CLK_2073 NC_010520.1 2896645 2897322 R identified by match to protein family HMM PF02397; undecaprenyl-phosphate galactosephosphotransferase complement(2896645..2897322) Clostridium botulinum A3 str. Loch Maree 6153334 YP_001788005.1 CDS CLK_2074 NC_010520.1 2897542 2898237 R identified by match to protein family HMM TIGR01007; capsular exopolysaccharide family protein complement(2897542..2898237) Clostridium botulinum A3 str. Loch Maree 6152515 YP_001788006.1 CDS CLK_2075 NC_010520.1 2898256 2899029 R identified by match to protein family HMM PF02811; exopolysaccharide biosynthesis protein complement(2898256..2899029) Clostridium botulinum A3 str. Loch Maree 6151693 YP_001788007.1 CDS CLK_2076 NC_010520.1 2899045 2899722 R identified by match to protein family HMM PF02706; capsular polysaccharide biosynthsis protein complement(2899045..2899722) Clostridium botulinum A3 str. Loch Maree 6154663 YP_001788008.1 CDS CLK_2077 NC_010520.1 2899757 2900719 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(2899757..2900719) Clostridium botulinum A3 str. Loch Maree 6153638 YP_001788009.1 CDS CLK_2078 NC_010520.1 2901180 2901356 R hypothetical protein complement(2901180..2901356) Clostridium botulinum A3 str. Loch Maree 6152626 YP_001788010.1 CDS CLK_2079 NC_010520.1 2901485 2901658 R identified by Glimmer3; hypothetical protein complement(2901485..2901658) Clostridium botulinum A3 str. Loch Maree 6153818 YP_001788011.1 CDS CLK_2080 NC_010520.1 2901779 2901946 R hypothetical protein complement(2901779..2901946) Clostridium botulinum A3 str. Loch Maree 6152846 YP_001788012.1 CDS CLK_2081 NC_010520.1 2902429 2903277 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(2902429..2903277) Clostridium botulinum A3 str. Loch Maree 6154106 YP_001788013.1 CDS fliC NC_010520.1 2903354 2904172 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2903354..2904172) Clostridium botulinum A3 str. Loch Maree 6153293 YP_001788014.1 CDS CLK_2083 NC_010520.1 2904357 2904860 R hypothetical protein complement(2904357..2904860) Clostridium botulinum A3 str. Loch Maree 6151977 YP_001788015.1 CDS CLK_2084 NC_010520.1 2904946 2906415 R hypothetical protein complement(2904946..2906415) Clostridium botulinum A3 str. Loch Maree 6154420 YP_001788016.1 CDS CLK_2085 NC_010520.1 2906639 2907649 R glycosyl transferase-like protein complement(2906639..2907649) Clostridium botulinum A3 str. Loch Maree 6153987 YP_001788017.1 CDS CLK_2086 NC_010520.1 2908143 2909147 R identified by match to protein family HMM PF00657; GDSL family lipase/acylhydrolase complement(2908143..2909147) Clostridium botulinum A3 str. Loch Maree 6152760 YP_001788018.1 CDS CLK_2087 NC_010520.1 2909236 2910333 R hypothetical protein complement(2909236..2910333) Clostridium botulinum A3 str. Loch Maree 6151548 YP_001788019.1 CDS CLK_2088 NC_010520.1 2910353 2911528 R identified by match to protein family HMM PF00515; match to protein family HMM PF00535; match to protein family HMM PF07719; glycosyl transferase family protein complement(2910353..2911528) Clostridium botulinum A3 str. Loch Maree 6152231 YP_001788020.1 CDS CLK_2089 NC_010520.1 2911556 2912734 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(2911556..2912734) Clostridium botulinum A3 str. Loch Maree 6154615 YP_001788021.1 CDS CLK_2090 NC_010520.1 2912838 2913365 R identified by Glimmer3; hypothetical protein complement(2912838..2913365) Clostridium botulinum A3 str. Loch Maree 6154516 YP_001788022.1 CDS CLK_2091 NC_010520.1 2913372 2914592 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(2913372..2914592) Clostridium botulinum A3 str. Loch Maree 6153559 YP_001788023.1 CDS CLK_2092 NC_010520.1 2914618 2915955 R identified by Glimmer3; hypothetical protein complement(2914618..2915955) Clostridium botulinum A3 str. Loch Maree 6151967 YP_001788024.1 CDS CLK_2093 NC_010520.1 2915991 2917424 R hypothetical protein complement(2915991..2917424) Clostridium botulinum A3 str. Loch Maree 6154242 YP_001788025.1 CDS CLK_2094 NC_010520.1 2917437 2918750 R identified by match to protein family HMM PF02629; CoA-binding domain-containing protein complement(2917437..2918750) Clostridium botulinum A3 str. Loch Maree 6152966 YP_001788026.1 CDS CLK_2095 NC_010520.1 2918771 2919766 R identified by match to protein family HMM PF08242; methyltransferase domain-containing protein complement(2918771..2919766) Clostridium botulinum A3 str. Loch Maree 6152672 YP_001788027.1 CDS CLK_2096 NC_010520.1 2919780 2921495 R identified by match to protein family HMM PF04464; glycerophosphotransferase complement(2919780..2921495) Clostridium botulinum A3 str. Loch Maree 6151402 YP_001788028.1 CDS CLK_2097 NC_010520.1 2921521 2922624 R identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; spore coat polysaccharide biosynthesis protein SpsC complement(2921521..2922624) Clostridium botulinum A3 str. Loch Maree 6154748 YP_001788029.1 CDS CLK_2098 NC_010520.1 2922751 2923743 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucose 4-epimerase complement(2922751..2923743) Clostridium botulinum A3 str. Loch Maree 6153491 YP_001788030.1 CDS CLK_2099 NC_010520.1 2923849 2924799 R identified by match to protein family HMM PF00551; match to protein family HMM PF02911; methionyl-tRNA formyltransferase complement(2923849..2924799) Clostridium botulinum A3 str. Loch Maree 6154207 YP_001788031.1 CDS CLK_2100 NC_010520.1 2924820 2925968 R identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase complement(2924820..2925968) Clostridium botulinum A3 str. Loch Maree 6152321 YP_001788032.1 CDS CLK_2101 NC_010520.1 2925977 2927002 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; spore coat polysaccharide biosynthesis protein SpsE complement(2925977..2927002) Clostridium botulinum A3 str. Loch Maree 6151531 YP_001788033.1 CDS CLK_2102 NC_010520.1 2926995 2927693 R identified by match to protein family HMM PF02348; N-acylneuraminate cytidylyltransferase complement(2926995..2927693) Clostridium botulinum A3 str. Loch Maree 6154398 YP_001788034.1 CDS CLK_2103 NC_010520.1 2927709 2928719 R identified by match to protein family HMM PF04055; molybdopterin cofactor synthesis protein A complement(2927709..2928719) Clostridium botulinum A3 str. Loch Maree 6153580 YP_001788035.1 CDS CLK_2104 NC_010520.1 2928785 2929837 R identified by match to protein family HMM PF00483; match to protein family HMM PF00571; nucleotidyl transferase complement(2928785..2929837) Clostridium botulinum A3 str. Loch Maree 6153766 YP_001788036.1 CDS CLK_2105 NC_010520.1 2929910 2930962 R identified by match to protein family HMM PF03102; match to protein family HMM PF08666; sialic acid synthase complement(2929910..2930962) Clostridium botulinum A3 str. Loch Maree 6154325 YP_001788037.1 CDS CLK_2106 NC_010520.1 2931104 2931859 R identified by match to protein family HMM PF02348; polysaccharide biosynthesis protein complement(2931104..2931859) Clostridium botulinum A3 str. Loch Maree 6151682 YP_001788038.1 CDS CLK_2107 NC_010520.1 2931972 2932658 R identified by match to protein family HMM PF00702; HAD family hydrolase complement(2931972..2932658) Clostridium botulinum A3 str. Loch Maree 6152273 YP_001788039.1 CDS CLK_2108 NC_010520.1 2932701 2933729 R undetermined role; similar to CarB protein but much smaller; carbamoyl phosphate synthase-like protein complement(2932701..2933729) Clostridium botulinum A3 str. Loch Maree 6152433 YP_001788040.1 CDS CLK_2109 NC_010520.1 2933950 2935014 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase complement(2933950..2935014) Clostridium botulinum A3 str. Loch Maree 6152970 YP_001788041.1 CDS CLK_2110 NC_010520.1 2935134 2936159 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; exopolysaccharide biosynthesis protein complement(2935134..2936159) Clostridium botulinum A3 str. Loch Maree 6152837 YP_001788042.1 CDS CLK_2111 NC_010520.1 2936200 2937621 R identified by match to protein family HMM PF00515; match to protein family HMM PF00535; match to protein family HMM PF07719; glycosyl transferase family protein complement(2936200..2937621) Clostridium botulinum A3 str. Loch Maree 6151950 YP_001788043.1 CDS CLK_2112 NC_010520.1 2937630 2937977 R hypothetical protein complement(2937630..2937977) Clostridium botulinum A3 str. Loch Maree 6153542 YP_001788044.1 CDS CLK_2113 NC_010520.1 2937981 2939684 R identified by match to protein family HMM PF01973; hypothetical protein complement(2937981..2939684) Clostridium botulinum A3 str. Loch Maree 6152518 YP_001788045.1 CDS CLK_2114 NC_010520.1 2939709 2941628 R identified by match to protein family HMM PF00515; match to protein family HMM PF00535; match to protein family HMM PF07719; glycosyl transferase family protein complement(2939709..2941628) Clostridium botulinum A3 str. Loch Maree 6152357 YP_001788046.1 CDS CLK_2115 NC_010520.1 2941912 2942751 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2941912..2942751) Clostridium botulinum A3 str. Loch Maree 6151587 YP_001788047.1 CDS CLK_2116 NC_010520.1 2942966 2943805 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(2942966..2943805) Clostridium botulinum A3 str. Loch Maree 6154897 YP_001788048.1 CDS CLK_2117 NC_010520.1 2943955 2944296 R hypothetical protein complement(2943955..2944296) Clostridium botulinum A3 str. Loch Maree 6153172 YP_001788049.1 CDS fliD NC_010520.1 2944323 2946758 R identified by match to protein family HMM PF02465; match to protein family HMM PF07195; flagellar hook-associated protein 2 complement(2944323..2946758) Clostridium botulinum A3 str. Loch Maree 6153879 YP_001788050.1 CDS fliS NC_010520.1 2946812 2947201 R identified by match to protein family HMM PF02561; match to protein family HMM TIGR00208; flagellar protein FliS complement(2946812..2947201) Clostridium botulinum A3 str. Loch Maree 6154735 YP_001788051.1 CDS CLK_2120 NC_010520.1 2947238 2947537 R hypothetical protein complement(2947238..2947537) Clostridium botulinum A3 str. Loch Maree 6154101 YP_001788052.1 CDS CLK_2121 NC_010520.1 2947594 2947950 R identified by match to protein family HMM PF03646; flagellar protein FlaG complement(2947594..2947950) Clostridium botulinum A3 str. Loch Maree 6153054 YP_001788053.1 CDS csrA NC_010520.1 2947966 2948184 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(2947966..2948184) Clostridium botulinum A3 str. Loch Maree 6152530 YP_001788054.1 CDS CLK_2123 NC_010520.1 2948184 2948615 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(2948184..2948615) Clostridium botulinum A3 str. Loch Maree 6151724 YP_001788055.1 CDS flgL NC_010520.1 2948683 2949645 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; match to protein family HMM TIGR02550; flagellar hook-associated protein 3 complement(2948683..2949645) Clostridium botulinum A3 str. Loch Maree 6154682 YP_001788056.1 CDS flgK NC_010520.1 2949663 2951528 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492; flagellar hook-associated protein FlgK complement(2949663..2951528) Clostridium botulinum A3 str. Loch Maree 6153865 YP_001788057.1 CDS CLK_2126 NC_010520.1 2951809 2952213 R identified by match to protein family HMM PF05130; flgN family protein complement(2951809..2952213) Clostridium botulinum A3 str. Loch Maree 6153340 YP_001788058.1 CDS CLK_2127 NC_010520.1 2952213 2952494 R identified by match to protein family HMM PF04316; regulator of flagellin synthesis FlgM complement(2952213..2952494) Clostridium botulinum A3 str. Loch Maree 6152019 YP_001788059.1 CDS fliN NC_010520.1 2953084 2954244 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein complement(2953084..2954244) Clostridium botulinum A3 str. Loch Maree 6151764 YP_001788060.1 CDS fliM NC_010520.1 2954237 2955232 R identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397; flagellar motor switch protein FliM complement(2954237..2955232) Clostridium botulinum A3 str. Loch Maree 6151440 YP_001788061.1 CDS CLK_2130 NC_010520.1 2955260 2955655 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(2955260..2955655) Clostridium botulinum A3 str. Loch Maree 6154293 YP_001788062.1 CDS cheY NC_010520.1 2955755 2956114 R identified by match to protein family HMM PF00072; chemotaxis protein CheY complement(2955755..2956114) Clostridium botulinum A3 str. Loch Maree 6153962 YP_001788063.1 CDS cheC NC_010520.1 2956142 2956741 R identified by match to protein family HMM PF04509; chemotaxis protein CheC complement(2956142..2956741) Clostridium botulinum A3 str. Loch Maree 6153160 YP_001788064.1 CDS cheA NC_010520.1 2956767 2958842 R identified by match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; match to protein family HMM PF07194; chemotaxis protein CheA complement(2956767..2958842) Clostridium botulinum A3 str. Loch Maree 6151873 YP_001788065.1 CDS cheR NC_010520.1 2958855 2959625 R identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein CheR complement(2958855..2959625) Clostridium botulinum A3 str. Loch Maree 6153393 YP_001788066.1 CDS cheB NC_010520.1 2959640 2960704 R identified by match to protein family HMM PF00072; match to protein family HMM PF01339; protein-glutamate methylesterase CheB complement(2959640..2960704) Clostridium botulinum A3 str. Loch Maree 6152110 YP_001788067.1 CDS cheD NC_010520.1 2960727 2961215 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(2960727..2961215) Clostridium botulinum A3 str. Loch Maree 6151356 YP_001788068.1 CDS cheW NC_010520.1 2961232 2961678 R identified by match to protein family HMM PF01584; chemotaxis protein CheW complement(2961232..2961678) Clostridium botulinum A3 str. Loch Maree 6154210 YP_001788069.1 CDS CLK_2138 NC_010520.1 2961694 2963727 R identified by match to protein family HMM PF03961; hypothetical protein complement(2961694..2963727) Clostridium botulinum A3 str. Loch Maree 6153817 YP_001788070.1 CDS CLK_2139 NC_010520.1 2963980 2965935 R identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system glucose family transporter subunit IIABC complement(2963980..2965935) Clostridium botulinum A3 str. Loch Maree 6152447 YP_001788071.1 CDS CLK_2140 NC_010520.1 2966018 2966845 R identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator complement(2966018..2966845) Clostridium botulinum A3 str. Loch Maree 6154000 YP_001788072.1 CDS CLK_2141 NC_010520.1 2967094 2967927 R identified by match to protein family HMM PF01063; branched-chain amino acid aminotransferase complement(2967094..2967927) Clostridium botulinum A3 str. Loch Maree 6154856 YP_001788073.1 CDS CLK_2142 NC_010520.1 2968054 2968695 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD family hydrolase complement(2968054..2968695) Clostridium botulinum A3 str. Loch Maree 6151986 YP_001788074.1 CDS CLK_2143 NC_010520.1 2968952 2969353 R hypothetical protein complement(2968952..2969353) Clostridium botulinum A3 str. Loch Maree 6152834 YP_001788075.1 CDS CLK_2144 NC_010520.1 2969614 2969730 R identified by Glimmer3; hypothetical protein complement(2969614..2969730) Clostridium botulinum A3 str. Loch Maree 6151974 YP_001788076.1 CDS CLK_2145 NC_010520.1 2969996 2973574 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate ferredoxin oxidoreductase complement(2969996..2973574) Clostridium botulinum A3 str. Loch Maree 6154875 YP_001788077.1 CDS murG NC_010520.1 2974205 2975269 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2974205..2975269) Clostridium botulinum A3 str. Loch Maree 6152188 YP_001788078.1 CDS CLK_2147 NC_010520.1 2975593 2975757 D identified by Glimmer3; hypothetical protein 2975593..2975757 Clostridium botulinum A3 str. Loch Maree 6152342 YP_001788079.1 CDS CLK_2148 NC_010520.1 2975871 2977979 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensory box histidine kinase complement(2975871..2977979) Clostridium botulinum A3 str. Loch Maree 6153382 YP_001788080.1 CDS recJ NC_010520.1 2978680 2980461 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(2978680..2980461) Clostridium botulinum A3 str. Loch Maree 6153973 YP_001788081.1 CDS CLK_2150 NC_010520.1 2980652 2981470 D identified by match to protein family HMM PF01261; AP endonuclease 2980652..2981470 Clostridium botulinum A3 str. Loch Maree 6153179 YP_001788082.1 CDS CLK_2151 NC_010520.1 2981758 2983152 R identified by match to protein family HMM PF01436; NHL repeat-containing protein complement(2981758..2983152) Clostridium botulinum A3 str. Loch Maree 6154241 YP_001788083.1 CDS CLK_2152 NC_010520.1 2984158 2985375 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(2984158..2985375) Clostridium botulinum A3 str. Loch Maree 6152867 YP_001788084.1 CDS CLK_2153 NC_010520.1 2985754 2986164 D hypothetical protein 2985754..2986164 Clostridium botulinum A3 str. Loch Maree 6152571 YP_001788085.1 CDS CLK_2154 NC_010520.1 2986232 2986783 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1 family protein 2986232..2986783 Clostridium botulinum A3 str. Loch Maree 6151965 YP_001788086.1 CDS glpP NC_010520.1 2987136 2987699 R identified by match to protein family HMM PF04309; glycerol uptake operon antiterminator regulatory protein complement(2987136..2987699) Clostridium botulinum A3 str. Loch Maree 6152775 YP_001788087.1 CDS CLK_2156 NC_010520.1 2987748 2990618 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(2987748..2990618) Clostridium botulinum A3 str. Loch Maree 6153891 YP_001788088.1 CDS CLK_2157 NC_010520.1 2990692 2992647 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(2990692..2992647) Clostridium botulinum A3 str. Loch Maree 6154439 YP_001788089.1 CDS CLK_2158 NC_010520.1 2993013 2993390 R hypothetical protein complement(2993013..2993390) Clostridium botulinum A3 str. Loch Maree 6154499 YP_001788090.1 CDS CLK_2159 NC_010520.1 2993577 2994749 D identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein 2993577..2994749 Clostridium botulinum A3 str. Loch Maree 6151416 YP_001788091.1 CDS CLK_2160 NC_010520.1 2994762 2995112 D hypothetical protein 2994762..2995112 Clostridium botulinum A3 str. Loch Maree 6151809 YP_001788092.1 CDS CLK_2161 NC_010520.1 2995573 2995809 D identified by Glimmer3; hypothetical protein 2995573..2995809 Clostridium botulinum A3 str. Loch Maree 6153041 YP_001788093.1 CDS CLK_2162 NC_010520.1 2995829 2996722 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 2995829..2996722 Clostridium botulinum A3 str. Loch Maree 6153463 YP_001788094.1 CDS CLK_2163 NC_010520.1 2996801 2998090 R identified by Glimmer3; hypothetical protein complement(2996801..2998090) Clostridium botulinum A3 str. Loch Maree 6154638 YP_001788095.1 CDS galE NC_010520.1 2998128 2999108 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(2998128..2999108) Clostridium botulinum A3 str. Loch Maree 6153446 YP_001788096.1 CDS CLK_2165 NC_010520.1 2999460 2999876 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin complement(2999460..2999876) Clostridium botulinum A3 str. Loch Maree 6154454 YP_001788097.1 CDS CLK_2166 NC_010520.1 3000144 3001565 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(3000144..3001565) Clostridium botulinum A3 str. Loch Maree 6151363 YP_001788098.1 CDS CLK_2167 NC_010520.1 3002155 3004221 R identified by match to protein family HMM PF00165; match to protein family HMM PF07883; AraC family transcriptional regulator complement(3002155..3004221) Clostridium botulinum A3 str. Loch Maree 6152353 YP_001788099.1 CDS CLK_2168 NC_010520.1 3004480 3005517 D identified by match to protein family HMM PF02016; LD-carboxypeptidase 3004480..3005517 Clostridium botulinum A3 str. Loch Maree 6152823 YP_001788100.1 CDS glpK NC_010520.1 3006104 3007600 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase complement(3006104..3007600) Clostridium botulinum A3 str. Loch Maree 6154685 YP_001788101.1 CDS CLK_2170 NC_010520.1 3007852 3008556 R identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein complement(3007852..3008556) Clostridium botulinum A3 str. Loch Maree 6151412 YP_001788102.1 CDS CLK_2171 NC_010520.1 3009091 3009411 D identified by match to protein family HMM PF01906; hypothetical protein 3009091..3009411 Clostridium botulinum A3 str. Loch Maree 6152005 YP_001788103.1 CDS CLK_2172 NC_010520.1 3009523 3010221 R identified by match to protein family HMM PF04892; VanZ family membrane protein complement(3009523..3010221) Clostridium botulinum A3 str. Loch Maree 6153490 YP_001788104.1 CDS CLK_2173 NC_010520.1 3010353 3011429 R ABC transporter permease complement(3010353..3011429) Clostridium botulinum A3 str. Loch Maree 6154543 YP_001788105.1 CDS CLK_2174 NC_010520.1 3011413 3012309 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3011413..3012309) Clostridium botulinum A3 str. Loch Maree 6152297 YP_001788106.1 CDS CLK_2175 NC_010520.1 3012315 3012695 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(3012315..3012695) Clostridium botulinum A3 str. Loch Maree 6153616 YP_001788107.1 CDS CLK_2176 NC_010520.1 3012868 3013383 R identified by match to protein family HMM PF04892; VanZ family membrane protein complement(3012868..3013383) Clostridium botulinum A3 str. Loch Maree 6154839 YP_001788108.1 CDS CLK_2177 NC_010520.1 3013814 3015526 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 3013814..3015526 Clostridium botulinum A3 str. Loch Maree 6151515 YP_001788109.1 CDS CLK_2178 NC_010520.1 3015685 3016287 R methyl-accepting chemotaxis protein complement(3015685..3016287) Clostridium botulinum A3 str. Loch Maree 6152237 YP_001788110.1 CDS CLK_2179 NC_010520.1 3016541 3017146 D membrane-spanning protein 3016541..3017146 Clostridium botulinum A3 str. Loch Maree 6154793 YP_001788111.1 CDS CLK_2180 NC_010520.1 3017338 3019056 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(3017338..3019056) Clostridium botulinum A3 str. Loch Maree 6154841 YP_001788112.1 CDS CLK_2181 NC_010520.1 3019384 3020616 D identified by match to protein family HMM PF02073; aminopeptidase 3019384..3020616 Clostridium botulinum A3 str. Loch Maree 6152747 YP_001788113.1 CDS gerAC NC_010520.1 3020805 3021938 R identified by match to protein family HMM PF05504; match to protein family HMM TIGR02887; spore germination protein complement(3020805..3021938) Clostridium botulinum A3 str. Loch Maree 6151709 YP_001788114.1 CDS CLK_2183 NC_010520.1 3021904 3023025 R identified by match to protein family HMM PF03845; match to protein family HMM TIGR00912; spore germination protein complement(3021904..3023025) Clostridium botulinum A3 str. Loch Maree 6154341 YP_001788115.1 CDS gerAA NC_010520.1 3023015 3024502 R identified by match to protein family HMM PF03323; spore germination protein complement(3023015..3024502) Clostridium botulinum A3 str. Loch Maree 6154763 YP_001788116.1 CDS CLK_2185 NC_010520.1 3024763 3024972 R identified by Glimmer3; hypothetical protein complement(3024763..3024972) Clostridium botulinum A3 str. Loch Maree 6151623 YP_001788117.1 CDS CLK_2186 NC_010520.1 3025232 3025813 R with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT complement(3025232..3025813) Clostridium botulinum A3 str. Loch Maree 6152660 YP_001788118.1 CDS CLK_2187 NC_010520.1 3025815 3026687 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(3025815..3026687) Clostridium botulinum A3 str. Loch Maree 6153222 YP_001788119.1 CDS CLK_2188 NC_010520.1 3027054 3027785 R identified by match to protein family HMM PF01522; polysaccharide deacetylase complement(3027054..3027785) Clostridium botulinum A3 str. Loch Maree 6153183 YP_001788120.1 CDS CLK_2189 NC_010520.1 3028005 3029579 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; DEAD/DEAH box helicase complement(3028005..3029579) Clostridium botulinum A3 str. Loch Maree 6153481 YP_001788121.1 CDS CLK_2190 NC_010520.1 3029656 3029823 R hypothetical protein complement(3029656..3029823) Clostridium botulinum A3 str. Loch Maree 6153715 YP_001788122.1 CDS CLK_2191 NC_010520.1 3030255 3030680 D identified by Glimmer3; hypothetical protein 3030255..3030680 Clostridium botulinum A3 str. Loch Maree 6153090 YP_001788123.1 CDS CLK_2192 NC_010520.1 3030769 3032463 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(3030769..3032463) Clostridium botulinum A3 str. Loch Maree 6151877 YP_001788124.1 CDS CLK_2193 NC_010520.1 3032660 3033070 R identified by match to protein family HMM PF00582; universal stress protein family protein complement(3032660..3033070) Clostridium botulinum A3 str. Loch Maree 6154324 YP_001788125.1 CDS CLK_2194 NC_010520.1 3033711 3034352 D identified by match to protein family HMM PF00037; (Fe-S)-binding protein 3033711..3034352 Clostridium botulinum A3 str. Loch Maree 6151593 YP_001788126.1 CDS CLK_2195 NC_010520.1 3034602 3035519 R catalyzes the formation of glutamate from glutamine; glutaminase complement(3034602..3035519) Clostridium botulinum A3 str. Loch Maree 6151943 YP_001788127.1 CDS CLK_2196 NC_010520.1 3035921 3036946 R identified by match to protein family HMM PF06725; hypothetical protein complement(3035921..3036946) Clostridium botulinum A3 str. Loch Maree 6154625 YP_001788128.1 CDS CLK_2197 NC_010520.1 3037213 3037497 R lipoprotein complement(3037213..3037497) Clostridium botulinum A3 str. Loch Maree 6154074 YP_001788129.1 CDS CLK_2198 NC_010520.1 3037628 3039688 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(3037628..3039688) Clostridium botulinum A3 str. Loch Maree 6153021 YP_001788130.1 CDS CLK_2199 NC_010520.1 3040205 3041005 R hypothetical protein complement(3040205..3041005) Clostridium botulinum A3 str. Loch Maree 6154181 YP_001788131.1 CDS nrdB NC_010520.1 3041349 3042377 R identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta complement(3041349..3042377) Clostridium botulinum A3 str. Loch Maree 6151758 YP_001788132.1 CDS nrdA NC_010520.1 3042572 3044863 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(3042572..3044863) Clostridium botulinum A3 str. Loch Maree 6154185 YP_001788133.1 CDS CLK_2202 NC_010520.1 3045259 3045888 R identified by match to protein family HMM PF02677; hypothetical protein complement(3045259..3045888) Clostridium botulinum A3 str. Loch Maree 6151753 YP_001788134.1 CDS CLK_2203 NC_010520.1 3046561 3047682 D hypothetical protein 3046561..3047682 Clostridium botulinum A3 str. Loch Maree 6152566 YP_001788135.1 CDS CLK_2204 NC_010520.1 3047982 3048770 D hypothetical protein 3047982..3048770 Clostridium botulinum A3 str. Loch Maree 6153842 YP_001788136.1 CDS dinB NC_010520.1 3048930 3049979 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(3048930..3049979) Clostridium botulinum A3 str. Loch Maree 6154693 YP_001788137.1 CDS CLK_2206 NC_010520.1 3050444 3051679 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(3050444..3051679) Clostridium botulinum A3 str. Loch Maree 6152225 YP_001788138.1 CDS CLK_2207 NC_010520.1 3051679 3052995 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase complement(3051679..3052995) Clostridium botulinum A3 str. Loch Maree 6153285 YP_001788139.1 CDS pyrR NC_010520.1 3053442 3053990 R identified by match to protein family HMM PF00156; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase complement(3053442..3053990) Clostridium botulinum A3 str. Loch Maree 6154100 YP_001788140.1 CDS CLK_2209 NC_010520.1 3054317 3055372 R identified by match to protein family HMM PF02698; hypothetical protein complement(3054317..3055372) Clostridium botulinum A3 str. Loch Maree 6152341 YP_001788141.1 CDS CLK_2210 NC_010520.1 3055862 3056455 R hypothetical protein complement(3055862..3056455) Clostridium botulinum A3 str. Loch Maree 6154795 YP_001788142.1 CDS CLK_2211 NC_010520.1 3056613 3057032 R identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator complement(3056613..3057032) Clostridium botulinum A3 str. Loch Maree 6151635 YP_001788143.1 CDS CLK_2212 NC_010520.1 3057050 3059308 R identified by match to protein family HMM PF00005; excinuclease ABC subunit A complement(3057050..3059308) Clostridium botulinum A3 str. Loch Maree 6153821 YP_001788144.1 CDS ligT NC_010520.1 3059854 3060381 R identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase complement(3059854..3060381) Clostridium botulinum A3 str. Loch Maree 6152704 YP_001788145.1 CDS CLK_2216 NC_010520.1 3060566 3060964 R identified by Glimmer3; hypothetical protein complement(3060566..3060964) Clostridium botulinum A3 str. Loch Maree 6153273 YP_001788146.1 CDS CLK_2217 NC_010520.1 3061539 3063251 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(3061539..3063251) Clostridium botulinum A3 str. Loch Maree 6153086 YP_001788147.1 CDS CLK_2218 NC_010520.1 3063961 3064398 R identified by match to protein family HMM PF00293; MutT/nudix family protein complement(3063961..3064398) Clostridium botulinum A3 str. Loch Maree 6152113 YP_001788148.1 CDS CLK_2219 NC_010520.1 3065117 3067114 D identified by Glimmer3; hypothetical protein 3065117..3067114 Clostridium botulinum A3 str. Loch Maree 6154386 YP_001788149.1 CDS CLK_2220 NC_010520.1 3067201 3069420 R identified by match to protein family HMM PF00704; glycosyl hydrolase complement(3067201..3069420) Clostridium botulinum A3 str. Loch Maree 6153538 YP_001788150.1 CDS nagB NC_010520.1 3069647 3070381 R catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase complement(3069647..3070381) Clostridium botulinum A3 str. Loch Maree 6154330 YP_001788151.1 CDS nagA NC_010520.1 3070464 3071606 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase complement(3070464..3071606) Clostridium botulinum A3 str. Loch Maree 6153507 YP_001788152.1 CDS CLK_2223 NC_010520.1 3071767 3072501 R identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator complement(3071767..3072501) Clostridium botulinum A3 str. Loch Maree 6152262 YP_001788153.1 CDS CLK_2224 NC_010520.1 3072823 3073680 D identified by match to protein family HMM PF00874; match to protein family HMM PF03123; BglG family transcriptional antiterminator 3072823..3073680 Clostridium botulinum A3 str. Loch Maree 6151492 YP_001788154.1 CDS ptbA NC_010520.1 3073900 3074379 R identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose subfamily transporter subunit IIA complement(3073900..3074379) Clostridium botulinum A3 str. Loch Maree 6154891 YP_001788155.1 CDS nagE NC_010520.1 3075075 3076517 D identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998; PTS system N-acetylglucosamine-specific transporter subunit IIBC 3075075..3076517 Clostridium botulinum A3 str. Loch Maree 6154073 YP_001788156.1 CDS CLK_2227 NC_010520.1 3077000 3078370 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 3077000..3078370 Clostridium botulinum A3 str. Loch Maree 6152803 YP_001788157.1 CDS CLK_2228 NC_010520.1 3078504 3079424 R identified by match to protein family HMM PF01458; ABC transporter system permease involved in Fe-S cluster assembly complement(3078504..3079424) Clostridium botulinum A3 str. Loch Maree 6151799 YP_001788158.1 CDS CLK_2229 NC_010520.1 3079426 3080145 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3079426..3080145) Clostridium botulinum A3 str. Loch Maree 6152971 YP_001788159.1 CDS CLK_2230 NC_010520.1 3080235 3080837 R hypothetical protein complement(3080235..3080837) Clostridium botulinum A3 str. Loch Maree 6151871 YP_001788160.1 CDS CLK_2231 NC_010520.1 3081390 3081872 D identified by match to protein family HMM PF01475; ferric uptake regulation protein 3081390..3081872 Clostridium botulinum A3 str. Loch Maree 6152451 YP_001788161.1 CDS CLK_2232 NC_010520.1 3082202 3083596 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM TIGR00797; MATE efflux family protein complement(3082202..3083596) Clostridium botulinum A3 str. Loch Maree 6151338 YP_001788162.1 CDS CLK_2233 NC_010520.1 3083832 3085031 R identified by match to protein family HMM PF00753; metallo-beta-lactamase/flavodoxin complement(3083832..3085031) Clostridium botulinum A3 str. Loch Maree 6154508 YP_001788163.1 CDS CLK_2234 NC_010520.1 3085089 3086996 R identified by match to protein family HMM PF00301; match to protein family HMM PF00441; match to protein family HMM PF00766; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(3085089..3086996) Clostridium botulinum A3 str. Loch Maree 6153513 YP_001788164.1 CDS CLK_2235 NC_010520.1 3087353 3088015 R identified by match to protein family HMM PF00665; IS3 family transposase complement(3087353..3088015) Clostridium botulinum A3 str. Loch Maree 6151905 YP_001788165.1 CDS CLK_2236 NC_010520.1 3088237 3088884 R identified by match to protein family HMM PF01527; IS3 family transposase complement(3088237..3088884) Clostridium botulinum A3 str. Loch Maree 6154800 YP_001788166.1 CDS CLK_2237 NC_010520.1 3089016 3089354 D mannose-specific phosphotransferase system component IIAB 3089016..3089354 Clostridium botulinum A3 str. Loch Maree 6153603 YP_001788167.1 CDS CLK_2238 NC_010520.1 3089693 3090409 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429; CoA-transferase subunit A 3089693..3090409 Clostridium botulinum A3 str. Loch Maree 6152790 YP_001788168.1 CDS CLK_2239 NC_010520.1 3090418 3091074 D identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428; CoA-transferase subunit B 3090418..3091074 Clostridium botulinum A3 str. Loch Maree 6153270 YP_001788169.1 CDS CLK_2240 NC_010520.1 3091656 3092225 R hypothetical protein complement(3091656..3092225) Clostridium botulinum A3 str. Loch Maree 6154305 YP_001788170.1 CDS CLK_2241 NC_010520.1 3092739 3093206 R identified by match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase, iron-sulfur binding protein complement(3092739..3093206) Clostridium botulinum A3 str. Loch Maree 6153181 YP_001788171.1 CDS CLK_2242 NC_010520.1 3093211 3094041 R identified by match to protein family HMM PF00941; xanthine dehydrogenase, FAD-binding subunit complement(3093211..3094041) Clostridium botulinum A3 str. Loch Maree 6154269 YP_001788172.1 CDS CLK_2243 NC_010520.1 3094028 3096367 R identified by match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase, molybdopterin-binding subunit complement(3094028..3096367) Clostridium botulinum A3 str. Loch Maree 6152023 YP_001788173.1 CDS CLK_2244 NC_010520.1 3096748 3096966 D pts system sucrose-specific eiibc component (eiibc-scr) (eii-scr) 3096748..3096966 Clostridium botulinum A3 str. Loch Maree 6153145 YP_001788174.1 CDS CLK_2245 NC_010520.1 3097016 3097162 D BglG family transcriptional antiterminator 3097016..3097162 Clostridium botulinum A3 str. Loch Maree 6153672 YP_001788175.1 CDS CLK_2246 NC_010520.1 3097509 3098726 R identified by match to protein family HMM PF00999; monovalent cation:proton antiporter-2 (CPA2) family protein complement(3097509..3098726) Clostridium botulinum A3 str. Loch Maree 6151686 YP_001788176.1 CDS CLK_2247 NC_010520.1 3099732 3100403 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD family hydrolase complement(3099732..3100403) Clostridium botulinum A3 str. Loch Maree 6152555 YP_001788177.1 CDS CLK_2248 NC_010520.1 3100433 3100693 R identified by match to protein family HMM PF04994; tfoX domain-containing protein complement(3100433..3100693) Clostridium botulinum A3 str. Loch Maree 6153374 YP_001788178.1 CDS CLK_2249 NC_010520.1 3101305 3101418 R hypothetical protein complement(3101305..3101418) Clostridium botulinum A3 str. Loch Maree 6152035 YP_001788179.1 CDS CLK_2250 NC_010520.1 3101440 3101661 R hypothetical protein complement(3101440..3101661) Clostridium botulinum A3 str. Loch Maree 6154282 YP_001788180.1 CDS CLK_2251 NC_010520.1 3102074 3103108 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; chloramphenicol/florfenicol resistance protein complement(3102074..3103108) Clostridium botulinum A3 str. Loch Maree 6152415 YP_001788181.1 CDS CLK_2252 NC_010520.1 3103273 3104751 R identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein complement(3103273..3104751) Clostridium botulinum A3 str. Loch Maree 6151398 YP_001788182.1 CDS CLK_2253 NC_010520.1 3105222 3105353 R identified by Glimmer3; hypothetical protein complement(3105222..3105353) Clostridium botulinum A3 str. Loch Maree 6154363 YP_001788183.1 CDS CLK_2254 NC_010520.1 3105710 3106507 R hypothetical protein complement(3105710..3106507) Clostridium botulinum A3 str. Loch Maree 6154716 YP_001788184.1 CDS CLK_2255 NC_010520.1 3106994 3108409 D identified by match to protein family HMM PF00199; catalase 3106994..3108409 Clostridium botulinum A3 str. Loch Maree 6152851 YP_001788185.1 CDS rumA-1 NC_010520.1 3109103 3110455 R identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(3109103..3110455) Clostridium botulinum A3 str. Loch Maree 6151833 YP_001788186.1 CDS CLK_2257 NC_010520.1 3110742 3111188 R identified by Glimmer3; hypothetical protein complement(3110742..3111188) Clostridium botulinum A3 str. Loch Maree 6154513 YP_001788187.1 CDS CLK_2258 NC_010520.1 3111519 3113378 D identified by match to protein family HMM PF00884; sulfatase 3111519..3113378 Clostridium botulinum A3 str. Loch Maree 6153257 YP_001788188.1 CDS CLK_2259 NC_010520.1 3113404 3114156 D identified by match to protein family HMM PF01925; hypothetical protein 3113404..3114156 Clostridium botulinum A3 str. Loch Maree 6154948 YP_001788189.1 CDS ribH NC_010520.1 3114384 3114848 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(3114384..3114848) Clostridium botulinum A3 str. Loch Maree 6151376 YP_001788190.1 CDS ribAB NC_010520.1 3114880 3116085 R identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506; bifunctional riboflavin biosynthesis protein RibAB complement(3114880..3116085) Clostridium botulinum A3 str. Loch Maree 6151889 YP_001788191.1 CDS ribE NC_010520.1 3116393 3117079 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(3116393..3117079) Clostridium botulinum A3 str. Loch Maree 6152910 YP_001788192.1 CDS ribD NC_010520.1 3117060 3118157 R identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD complement(3117060..3118157) Clostridium botulinum A3 str. Loch Maree 6152399 YP_001788193.1 CDS pepD NC_010520.1 3118559 3119995 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; aminoacyl-histidine dipeptidase complement(3118559..3119995) Clostridium botulinum A3 str. Loch Maree 6153469 YP_001788194.1 CDS CLK_2265 NC_010520.1 3120549 3121442 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 3120549..3121442 Clostridium botulinum A3 str. Loch Maree 6151339 YP_001788195.1 CDS mgtA NC_010520.1 3121679 3124324 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-translocating P-type ATPase complement(3121679..3124324) Clostridium botulinum A3 str. Loch Maree 6152356 YP_001788196.1 CDS CLK_2267 NC_010520.1 3125111 3125515 R hypothetical protein complement(3125111..3125515) Clostridium botulinum A3 str. Loch Maree 6153924 YP_001788197.1 CDS purD NC_010520.1 3125844 3127085 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(3125844..3127085) Clostridium botulinum A3 str. Loch Maree 6154943 YP_001788198.1 CDS purH NC_010520.1 3127137 3128636 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(3127137..3128636) Clostridium botulinum A3 str. Loch Maree 6154320 YP_001788199.1 CDS purN NC_010520.1 3128848 3129465 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(3128848..3129465) Clostridium botulinum A3 str. Loch Maree 6153240 YP_001788200.1 CDS purM NC_010520.1 3129592 3130587 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(3129592..3130587) Clostridium botulinum A3 str. Loch Maree 6154959 YP_001788201.1 CDS purF NC_010520.1 3130648 3132096 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(3130648..3132096) Clostridium botulinum A3 str. Loch Maree 6152397 YP_001788202.1 CDS purC NC_010520.1 3132188 3132892 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(3132188..3132892) Clostridium botulinum A3 str. Loch Maree 6152905 YP_001788203.1 CDS purE NC_010520.1 3132892 3133371 R identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(3132892..3133371) Clostridium botulinum A3 str. Loch Maree 6151844 YP_001788204.1 CDS CLK_2275 NC_010520.1 3134013 3136568 R identified by match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738; match to protein family HMM TIGR03311; xanthine dehydrogenase, molybdopterin-binding subunit complement(3134013..3136568) Clostridium botulinum A3 str. Loch Maree 6153422 YP_001788205.1 CDS CLK_2276 NC_010520.1 3136925 3138142 R Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; peptidase complement(3136925..3138142) Clostridium botulinum A3 str. Loch Maree 6152839 YP_001788206.1 CDS CLK_2277 NC_010520.1 3138168 3139496 R in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; chlorohydrolase/aminohydrolase complement(3138168..3139496) Clostridium botulinum A3 str. Loch Maree 6151434 YP_001788207.1 CDS CLK_2278 NC_010520.1 3139527 3142544 R with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; selenate reductase subunit YgfK complement(3139527..3142544) Clostridium botulinum A3 str. Loch Maree 6154476 YP_001788208.1 CDS CLK_2279 NC_010520.1 3142580 3143776 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR03316; aspartate/ornithine carbamoyltransferase complement(3142580..3143776) Clostridium botulinum A3 str. Loch Maree 6154567 YP_001788209.1 CDS hydA NC_010520.1 3144118 3145512 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(3144118..3145512) Clostridium botulinum A3 str. Loch Maree 6153976 YP_001788210.1 CDS CLK_2281 NC_010520.1 3145562 3146968 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine/uracil permease complement(3145562..3146968) Clostridium botulinum A3 str. Loch Maree 6152087 YP_001788211.1 CDS dpaL NC_010520.1 3146990 3148201 R catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase complement(3146990..3148201) Clostridium botulinum A3 str. Loch Maree 6154827 YP_001788212.1 CDS CLK_2283 NC_010520.1 3148486 3150249 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(3148486..3150249) Clostridium botulinum A3 str. Loch Maree 6154252 YP_001788213.1 CDS CLK_2284 NC_010520.1 3150613 3151350 D identified by match to protein family HMM TIGR03172; hypothetical protein 3150613..3151350 Clostridium botulinum A3 str. Loch Maree 6153185 YP_001788214.1 CDS CLK_2285 NC_010520.1 3151365 3151979 D identified by match to protein family HMM TIGR03310; hypothetical protein 3151365..3151979 Clostridium botulinum A3 str. Loch Maree 6151328 YP_001788215.1 CDS CLK_2286 NC_010520.1 3151960 3152808 D identified by match to protein family HMM TIGR03309; hypothetical protein 3151960..3152808 Clostridium botulinum A3 str. Loch Maree 6154477 YP_001788216.1 CDS CLK_2287 NC_010520.1 3152790 3153599 D identified by match to protein family HMM PF02625; xanthine dehydrogenase accessory factor 3152790..3153599 Clostridium botulinum A3 str. Loch Maree 6153443 YP_001788217.1 CDS CLK_2288 NC_010520.1 3153625 3154170 D hypothetical protein 3153625..3154170 Clostridium botulinum A3 str. Loch Maree 6152892 YP_001788218.1 CDS CLK_2289 NC_010520.1 3154167 3155135 D identified by match to protein family HMM PF00950; match to protein family HMM PF01032; iron ABC transporter permease 3154167..3155135 Clostridium botulinum A3 str. Loch Maree 6153555 YP_001788219.1 CDS CLK_2290 NC_010520.1 3155132 3155926 D identified by match to protein family HMM PF00005; iron ABC transporter ATP-binding protein 3155132..3155926 Clostridium botulinum A3 str. Loch Maree 6154333 YP_001788220.1 CDS CLK_2291 NC_010520.1 3155978 3157036 D identified by match to protein family HMM PF01497; iron chelate uptake ABC transporter solute-binding protein 3155978..3157036 Clostridium botulinum A3 str. Loch Maree 6151953 YP_001788221.1 CDS CLK_2292 NC_010520.1 3157174 3157506 D identified by Glimmer3; hypothetical protein 3157174..3157506 Clostridium botulinum A3 str. Loch Maree 6152749 YP_001788222.1 CDS CLK_2293 NC_010520.1 3157634 3158206 D identified by match to protein family HMM PF00657; GDSL family lipase/acylhydrolase 3157634..3158206 Clostridium botulinum A3 str. Loch Maree 6153534 YP_001788223.1 CDS CLK_2294 NC_010520.1 3158320 3158913 R identified by match to protein family HMM PF02698; hypothetical protein complement(3158320..3158913) Clostridium botulinum A3 str. Loch Maree 6154785 YP_001788224.1 CDS CLK_2295 NC_010520.1 3159312 3160754 R identified by match to protein family HMM PF00860; xanthine/uracil permease complement(3159312..3160754) Clostridium botulinum A3 str. Loch Maree 6151876 YP_001788225.1 CDS CLK_2296 NC_010520.1 3161344 3162696 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium:alanine symporter family protein complement(3161344..3162696) Clostridium botulinum A3 str. Loch Maree 6153115 YP_001788226.1 CDS CLK_2297 NC_010520.1 3163646 3165937 R helicase complement(3163646..3165937) Clostridium botulinum A3 str. Loch Maree 6153914 YP_001788227.1 CDS mnmA NC_010520.1 3166441 3167502 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3166441..3167502) Clostridium botulinum A3 str. Loch Maree 6153305 YP_001788228.1 CDS CLK_2299 NC_010520.1 3167611 3169242 R identified by match to protein family HMM PF01546; M20/M25/M40 family peptidase complement(3167611..3169242) Clostridium botulinum A3 str. Loch Maree 6152121 YP_001788229.1 CDS CLK_2300 NC_010520.1 3169242 3169739 R hypothetical protein complement(3169242..3169739) Clostridium botulinum A3 str. Loch Maree 6151599 YP_001788230.1 CDS CLK_2301 NC_010520.1 3170089 3171414 D identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; HlyC/CorC family protein 3170089..3171414 Clostridium botulinum A3 str. Loch Maree 6152643 YP_001788231.1 CDS CLK_2302 NC_010520.1 3171767 3172057 R identified by match to protein family HMM PF01910; hypothetical protein complement(3171767..3172057) Clostridium botulinum A3 str. Loch Maree 6153998 YP_001788232.1 CDS thiC NC_010520.1 3172076 3173389 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(3172076..3173389) Clostridium botulinum A3 str. Loch Maree 6154691 YP_001788233.1 CDS purF NC_010520.1 3173600 3174976 R identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase complement(3173600..3174976) Clostridium botulinum A3 str. Loch Maree 6152024 YP_001788234.1 CDS CLK_2305 NC_010520.1 3175239 3175520 R identified by match to protein family HMM PF04456; hypothetical protein complement(3175239..3175520) Clostridium botulinum A3 str. Loch Maree 6153018 YP_001788235.1 CDS CLK_2306 NC_010520.1 3175712 3175888 R GntR family transcriptional regulator complement(3175712..3175888) Clostridium botulinum A3 str. Loch Maree 6153226 YP_001788236.1 CDS CLK_2307 NC_010520.1 3176598 3177110 D hypothetical protein 3176598..3177110 Clostridium botulinum A3 str. Loch Maree 6154286 YP_001788237.1 CDS CLK_2308 NC_010520.1 3177346 3178089 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(3177346..3178089) Clostridium botulinum A3 str. Loch Maree 6151598 YP_001788238.1 CDS CLK_2309 NC_010520.1 3178196 3178873 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 3178196..3178873 Clostridium botulinum A3 str. Loch Maree 6152511 YP_001788239.1 CDS CLK_2310 NC_010520.1 3178962 3179405 D identified by match to protein family HMM PF07486; cell wall hydrolase 3178962..3179405 Clostridium botulinum A3 str. Loch Maree 6153372 YP_001788240.1 CDS CLK_2311 NC_010520.1 3179428 3179943 D hypothetical protein 3179428..3179943 Clostridium botulinum A3 str. Loch Maree 6154159 YP_001788241.1 CDS CLK_2312 NC_010520.1 3180177 3180521 R identified by match to protein family HMM PF07883; hypothetical protein complement(3180177..3180521) Clostridium botulinum A3 str. Loch Maree 6153964 YP_001788242.1 CDS CLK_2313 NC_010520.1 3180638 3182800 R identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; phage infection protein complement(3180638..3182800) Clostridium botulinum A3 str. Loch Maree 6154957 YP_001788243.1 CDS CLK_2314 NC_010520.1 3183108 3183860 R identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase complement(3183108..3183860) Clostridium botulinum A3 str. Loch Maree 6151550 YP_001788244.1 CDS CLK_2315 NC_010520.1 3184239 3185201 R hypothetical protein complement(3184239..3185201) Clostridium botulinum A3 str. Loch Maree 6152300 YP_001788245.1 CDS CLK_2316 NC_010520.1 3185663 3186916 D identified by match to protein family HMM PF00282; decarboxylase 3185663..3186916 Clostridium botulinum A3 str. Loch Maree 6153631 YP_001788246.1 CDS CLK_2317 NC_010520.1 3187007 3188326 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; CBS/transporter associated domain-containing protein complement(3187007..3188326) Clostridium botulinum A3 str. Loch Maree 6154447 YP_001788247.1 CDS CLK_2318 NC_010520.1 3188976 3189710 R identified by match to protein family HMM PF02591; hypothetical protein complement(3188976..3189710) Clostridium botulinum A3 str. Loch Maree 6152935 YP_001788248.1 CDS CLK_2319 NC_010520.1 3189849 3190652 R identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein complement(3189849..3190652) Clostridium botulinum A3 str. Loch Maree 6152853 YP_001788249.1 CDS CLK_2320 NC_010520.1 3190643 3191332 R identified by match to protein family HMM PF04816; hypothetical protein complement(3190643..3191332) Clostridium botulinum A3 str. Loch Maree 6153649 YP_001788250.1 CDS CLK_2321 NC_010520.1 3191408 3192295 R hypothetical protein complement(3191408..3192295) Clostridium botulinum A3 str. Loch Maree 6154850 YP_001788251.1 CDS rpoD NC_010520.1 3192370 3193455 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(3192370..3193455) Clostridium botulinum A3 str. Loch Maree 6154091 YP_001788252.1 CDS dnaG NC_010520.1 3193480 3195252 R synthesizes RNA primers at the replication forks; DNA primase complement(3193480..3195252) Clostridium botulinum A3 str. Loch Maree 6154802 YP_001788253.1 CDS CLK_2324 NC_010520.1 3195535 3196563 R dGTPase type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3195535..3196563) Clostridium botulinum A3 str. Loch Maree 6151560 YP_001788254.1 CDS CLK_2325 NC_010520.1 3196705 3197775 D identified by match to protein family HMM TIGR02906; spore coat protein 3196705..3197775 Clostridium botulinum A3 str. Loch Maree 6154733 YP_001788255.1 CDS ppdK NC_010520.1 3197828 3200461 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(3197828..3200461) Clostridium botulinum A3 str. Loch Maree 6154388 YP_001788256.1 CDS CLK_2327 NC_010520.1 3200542 3201183 R identified by match to protein family HMM PF00571; match to protein family HMM PF08279; hypothetical protein complement(3200542..3201183) Clostridium botulinum A3 str. Loch Maree 6151731 YP_001788257.1 CDS CLK_2328 NC_010520.1 3201693 3202313 R identified by match to protein family HMM PF00627; UBA/TS-N domain-containing protein complement(3201693..3202313) Clostridium botulinum A3 str. Loch Maree 6152419 YP_001788258.1 CDS era NC_010520.1 3203092 3203982 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3203092..3203982) Clostridium botulinum A3 str. Loch Maree 6154344 YP_001788259.1 CDS cdd NC_010520.1 3203998 3204396 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(3203998..3204396) Clostridium botulinum A3 str. Loch Maree 6154687 YP_001788260.1 CDS CLK_2332 NC_010520.1 3204480 3205178 R identified by match to protein family HMM PF01219; match to protein family HMM PF01569; diacylglycerol kinase/PAP2 family protein complement(3204480..3205178) Clostridium botulinum A3 str. Loch Maree 6154467 YP_001788261.1 CDS CLK_2333 NC_010520.1 3205219 3205719 R identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease complement(3205219..3205719) Clostridium botulinum A3 str. Loch Maree 6153410 YP_001788262.1 CDS CLK_2334 NC_010520.1 3205716 3207803 R identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277; hydrolase complement(3205716..3207803) Clostridium botulinum A3 str. Loch Maree 6152443 YP_001788263.1 CDS CLK_2335 NC_010520.1 3207826 3208986 R identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876; stage IV sporulation protein complement(3207826..3208986) Clostridium botulinum A3 str. Loch Maree 6151418 YP_001788264.1 CDS yqfC NC_010520.1 3208976 3209272 R identified by match to protein family HMM PF07241; match to protein family HMM TIGR02856; sporulation protein YqfC complement(3208976..3209272) Clostridium botulinum A3 str. Loch Maree 6154983 YP_001788265.1 CDS CLK_2337 NC_010520.1 3209386 3209832 R identified by match to protein family HMM PF02637; GatB/Yqey domain-containing protein complement(3209386..3209832) Clostridium botulinum A3 str. Loch Maree 6153732 YP_001788266.1 CDS rpsU NC_010520.1 3209875 3210051 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(3209875..3210051) Clostridium botulinum A3 str. Loch Maree 6152922 YP_001788267.1 CDS CLK_2339 NC_010520.1 3210188 3210532 R identified by match to protein family HMM PF01230; HIT family protein complement(3210188..3210532) Clostridium botulinum A3 str. Loch Maree 6153495 YP_001788268.1 CDS CLK_2340 NC_010520.1 3210589 3211887 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; RNA modification protein complement(3210589..3211887) Clostridium botulinum A3 str. Loch Maree 6152926 YP_001788269.1 CDS CLK_2341 NC_010520.1 3211887 3212645 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(3211887..3212645) Clostridium botulinum A3 str. Loch Maree 6151500 YP_001788270.1 CDS prmA NC_010520.1 3212743 3213681 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase complement(3212743..3213681) Clostridium botulinum A3 str. Loch Maree 6151897 YP_001788271.1 CDS dnaJ NC_010520.1 3213989 3215134 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(3213989..3215134) Clostridium botulinum A3 str. Loch Maree 6154643 YP_001788272.1 CDS dnaK NC_010520.1 3215277 3217148 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(3215277..3217148) Clostridium botulinum A3 str. Loch Maree 6154541 YP_001788273.1 CDS grpE NC_010520.1 3217203 3217847 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(3217203..3217847) Clostridium botulinum A3 str. Loch Maree 6153434 YP_001788274.1 CDS hrcA NC_010520.1 3217874 3218905 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3217874..3218905) Clostridium botulinum A3 str. Loch Maree 6151399 YP_001788275.1 CDS CLK_2347 NC_010520.1 3219106 3220248 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3219106..3220248) Clostridium botulinum A3 str. Loch Maree 6154878 YP_001788276.1 CDS lepA NC_010520.1 3220274 3222082 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(3220274..3222082) Clostridium botulinum A3 str. Loch Maree 6153611 YP_001788277.1 CDS CLK_2349 NC_010520.1 3222223 3222618 R hypothetical protein complement(3222223..3222618) Clostridium botulinum A3 str. Loch Maree 6154213 YP_001788278.1 CDS CLK_2350 NC_010520.1 3222689 3223780 R identified by match to protein family HMM PF07454; match to protein family HMM TIGR02867; stage II sporulation protein complement(3222689..3223780) Clostridium botulinum A3 str. Loch Maree 6153477 YP_001788279.1 CDS gpr NC_010520.1 3223964 3224938 R Initiates the rapid degradation of small, acid-soluble proteins during spore germination; germination protease complement(3223964..3224938) Clostridium botulinum A3 str. Loch Maree 6152420 YP_001788280.1 CDS rpsT NC_010520.1 3225148 3225414 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3225148..3225414 Clostridium botulinum A3 str. Loch Maree 6152524 YP_001788281.1 CDS holA NC_010520.1 3225449 3226477 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(3225449..3226477) Clostridium botulinum A3 str. Loch Maree 6151395 YP_001788282.1 CDS CLK_2354 NC_010520.1 3226509 3228296 R identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; ComEC/Rec2 family protein complement(3226509..3228296) Clostridium botulinum A3 str. Loch Maree 6154503 YP_001788283.1 CDS CLK_2355 NC_010520.1 3228308 3228538 R hypothetical protein complement(3228308..3228538) Clostridium botulinum A3 str. Loch Maree 6153445 YP_001788284.1 CDS CLK_2356 NC_010520.1 3228643 3231237 R identified by match to protein family HMM PF00122; match to protein family HMM PF00690; cation transporting ATPase complement(3228643..3231237) Clostridium botulinum A3 str. Loch Maree 6152818 YP_001788285.1 CDS CLK_2357 NC_010520.1 3231745 3232716 R identified by match to protein family HMM PF07556; hypothetical protein complement(3231745..3232716) Clostridium botulinum A3 str. Loch Maree 6151835 YP_001788286.1 CDS CLK_2358 NC_010520.1 3232727 3233266 D identified by Glimmer3; hypothetical protein 3232727..3233266 Clostridium botulinum A3 str. Loch Maree 6154117 YP_001788287.1 CDS selB NC_010520.1 3235249 3237156 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475; selenocysteine-specific translation elongation factor complement(3235249..3237156) Clostridium botulinum A3 str. Loch Maree 6155054 YP_001788288.1 CDS selA NC_010520.1 3237175 3238563 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(3237175..3238563) Clostridium botulinum A3 str. Loch Maree 6154606 YP_001788289.1 CDS selD NC_010520.1 3238630 3239595 R identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00476; selenide, water dikinase complement(3238630..3239595) Clostridium botulinum A3 str. Loch Maree 6154059 YP_001788290.1 CDS CLK_2362 NC_010520.1 3239815 3240423 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comE operon protein 1 complement(3239815..3240423) Clostridium botulinum A3 str. Loch Maree 6154864 YP_001788291.1 CDS CLK_2363 NC_010520.1 3240612 3241859 D identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 3240612..3241859 Clostridium botulinum A3 str. Loch Maree 6154157 YP_001788292.1 CDS CLK_2364 NC_010520.1 3241966 3242868 R identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; RluA family pseudouridine synthase complement(3241966..3242868) Clostridium botulinum A3 str. Loch Maree 6153380 YP_001788293.1 CDS CLK_2365 NC_010520.1 3243194 3243574 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(3243194..3243574) Clostridium botulinum A3 str. Loch Maree 6152410 YP_001788294.1 CDS CLK_2366 NC_010520.1 3243590 3244864 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; cell envelope-related function transcriptional attenuator complement(3243590..3244864) Clostridium botulinum A3 str. Loch Maree 6154362 YP_001788295.1 CDS CLK_2367 NC_010520.1 3244875 3245444 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR00488; HDIG domain-containing protein complement(3244875..3245444) Clostridium botulinum A3 str. Loch Maree 6153521 YP_001788296.1 CDS nadD NC_010520.1 3245527 3246132 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(3245527..3246132) Clostridium botulinum A3 str. Loch Maree 6152714 YP_001788297.1 CDS CLK_2369 NC_010520.1 3246375 3246668 R identified by match to protein family HMM PF01985; match to protein family HMM TIGR00253; RNA-binding protein complement(3246375..3246668) Clostridium botulinum A3 str. Loch Maree 6152825 YP_001788298.1 CDS obgE NC_010520.1 3246695 3247969 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3246695..3247969) Clostridium botulinum A3 str. Loch Maree 6154323 YP_001788299.1 CDS rpmA NC_010520.1 3248348 3248650 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3248348..3248650) Clostridium botulinum A3 str. Loch Maree 6151347 YP_001788300.1 CDS CLK_2372 NC_010520.1 3248653 3248979 R identified by match to protein family HMM PF04327; hypothetical protein complement(3248653..3248979) Clostridium botulinum A3 str. Loch Maree 6152409 YP_001788301.1 CDS rplU NC_010520.1 3248982 3249296 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(3248982..3249296) Clostridium botulinum A3 str. Loch Maree 6153198 YP_001788302.1 CDS CLK_2374 NC_010520.1 3249420 3250859 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease complement(3249420..3250859) Clostridium botulinum A3 str. Loch Maree 6154409 YP_001788303.1 CDS CLK_2375 NC_010520.1 3250898 3251611 R hypothetical protein complement(3250898..3251611) Clostridium botulinum A3 str. Loch Maree 6152544 YP_001788304.1 CDS CLK_2376 NC_010520.1 3251589 3253439 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3251589..3253439) Clostridium botulinum A3 str. Loch Maree 6152903 YP_001788305.1 CDS CLK_2377 NC_010520.1 3253552 3254403 R identified by match to protein family HMM PF02163; metalloprotease complement(3253552..3254403) Clostridium botulinum A3 str. Loch Maree 6153660 YP_001788306.1 CDS CLK_2378 NC_010520.1 3254458 3255243 R identified by match to protein family HMM PF01551; M24/M37 family peptidase complement(3254458..3255243) Clostridium botulinum A3 str. Loch Maree 6154926 YP_001788307.1 CDS rodA NC_010520.1 3255561 3256679 R identified by match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA complement(3255561..3256679) Clostridium botulinum A3 str. Loch Maree 6153792 YP_001788308.1 CDS minE NC_010520.1 3256778 3257041 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(3256778..3257041) Clostridium botulinum A3 str. Loch Maree 6154833 YP_001788309.1 CDS minD NC_010520.1 3257055 3257852 R identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD complement(3257055..3257852) Clostridium botulinum A3 str. Loch Maree 6151659 YP_001788310.1 CDS minC NC_010520.1 3257870 3258499 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(3257870..3258499) Clostridium botulinum A3 str. Loch Maree 6152725 YP_001788311.1 CDS CLK_2383 NC_010520.1 3258674 3261448 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein complement(3258674..3261448) Clostridium botulinum A3 str. Loch Maree 6153548 YP_001788312.1 CDS mreD NC_010520.1 3261468 3261959 R identified by match to protein family HMM PF04093; match to protein family HMM TIGR03426; rod shape-determining protein MreD complement(3261468..3261959) Clostridium botulinum A3 str. Loch Maree 6154128 YP_001788313.1 CDS mreC NC_010520.1 3261970 3262827 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3261970..3262827) Clostridium botulinum A3 str. Loch Maree 6151860 YP_001788314.1 CDS CLK_2386 NC_010520.1 3262834 3263844 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3262834..3263844) Clostridium botulinum A3 str. Loch Maree 6152533 YP_001788315.1 CDS radC NC_010520.1 3263873 3264559 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(3263873..3264559) Clostridium botulinum A3 str. Loch Maree 6154978 YP_001788316.1 CDS maf NC_010520.1 3264574 3265158 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(3264574..3265158) Clostridium botulinum A3 str. Loch Maree 6151794 YP_001788317.1 CDS CLK_2389 NC_010520.1 3265174 3265431 R hypothetical protein complement(3265174..3265431) Clostridium botulinum A3 str. Loch Maree 6153237 YP_001788318.1 CDS CLK_2390 NC_010520.1 3265541 3266242 R hypothetical protein complement(3265541..3266242) Clostridium botulinum A3 str. Loch Maree 6152634 YP_001788319.1 CDS CLK_2391 NC_010520.1 3266468 3267007 R hypothetical protein complement(3266468..3267007) Clostridium botulinum A3 str. Loch Maree 6151701 YP_001788320.1 CDS CLK_2392 NC_010520.1 3267038 3267151 R identified by Glimmer3; hypothetical protein complement(3267038..3267151) Clostridium botulinum A3 str. Loch Maree 6153653 YP_001788321.1 CDS CLK_2393 NC_010520.1 3267391 3267945 D identified by match to protein family HMM PF02567; hypothetical protein 3267391..3267945 Clostridium botulinum A3 str. Loch Maree 6153037 YP_001788322.1 CDS pheB NC_010520.1 3268004 3268441 R identified by match to protein family HMM PF01842; hypothetical protein complement(3268004..3268441) Clostridium botulinum A3 str. Loch Maree 6152033 YP_001788323.1 CDS CLK_2395 NC_010520.1 3269357 3269902 R identified by match to protein family HMM PF01464; transglycosylase complement(3269357..3269902) Clostridium botulinum A3 str. Loch Maree 6155069 YP_001788324.1 CDS coaE NC_010520.1 3269920 3270558 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(3269920..3270558) Clostridium botulinum A3 str. Loch Maree 6153177 YP_001788325.1 CDS polA NC_010520.1 3270570 3273197 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(3270570..3273197) Clostridium botulinum A3 str. Loch Maree 6152565 YP_001788326.1 CDS aroC NC_010520.1 3273215 3274339 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(3273215..3274339) Clostridium botulinum A3 str. Loch Maree 6151775 YP_001788327.1 CDS CLK_2399 NC_010520.1 3274480 3275250 R identified by match to protein family HMM PF01520; match to protein family HMM PF08239; N-acetylmuramoyl-L-alanine amidase complement(3274480..3275250) Clostridium botulinum A3 str. Loch Maree 6152561 YP_001788328.1 CDS CLK_2400 NC_010520.1 3275397 3275591 R hypothetical protein complement(3275397..3275591) Clostridium botulinum A3 str. Loch Maree 6152197 YP_001788329.1 CDS CLK_2401 NC_010520.1 3275610 3275864 R hypothetical protein complement(3275610..3275864) Clostridium botulinum A3 str. Loch Maree 6154613 YP_001788330.1 CDS CLK_2402 NC_010520.1 3276015 3276824 R hypothetical protein complement(3276015..3276824) Clostridium botulinum A3 str. Loch Maree 6153192 YP_001788331.1 CDS CLK_2403 NC_010520.1 3276876 3278219 R hypothetical protein complement(3276876..3278219) Clostridium botulinum A3 str. Loch Maree 6153098 YP_001788332.1 CDS CLK_2404 NC_010520.1 3278233 3279153 R hypothetical protein complement(3278233..3279153) Clostridium botulinum A3 str. Loch Maree 6152294 YP_001788333.1 CDS CLK_2405 NC_010520.1 3279155 3279862 R hypothetical protein complement(3279155..3279862) Clostridium botulinum A3 str. Loch Maree 6151453 YP_001788334.1 CDS CLK_2406 NC_010520.1 3280132 3280908 R hypothetical protein complement(3280132..3280908) Clostridium botulinum A3 str. Loch Maree 6154368 YP_001788335.1 CDS CLK_2407 NC_010520.1 3280946 3281734 R hypothetical protein complement(3280946..3281734) Clostridium botulinum A3 str. Loch Maree 6153561 YP_001788336.1 CDS CLK_2408 NC_010520.1 3281748 3282728 R identified by match to protein family HMM PF02210; hypothetical protein complement(3281748..3282728) Clostridium botulinum A3 str. Loch Maree 6152449 YP_001788337.1 CDS CLK_2409 NC_010520.1 3282731 3283513 R hypothetical protein complement(3282731..3283513) Clostridium botulinum A3 str. Loch Maree 6153697 YP_001788338.1 CDS CLK_2410 NC_010520.1 3283604 3284689 R hypothetical protein complement(3283604..3284689) Clostridium botulinum A3 str. Loch Maree 6154762 YP_001788339.1 CDS CLK_2411 NC_010520.1 3284701 3285699 R hypothetical protein complement(3284701..3285699) Clostridium botulinum A3 str. Loch Maree 6152006 YP_001788340.1 CDS CLK_2412 NC_010520.1 3285711 3285965 R identified by Glimmer3; hypothetical protein complement(3285711..3285965) Clostridium botulinum A3 str. Loch Maree 6153880 YP_001788341.1 CDS CLK_2413 NC_010520.1 3285971 3287866 R hypothetical protein complement(3285971..3287866) Clostridium botulinum A3 str. Loch Maree 6154226 YP_001788342.1 CDS CLK_2414 NC_010520.1 3287881 3289134 R hypothetical protein complement(3287881..3289134) Clostridium botulinum A3 str. Loch Maree 6151330 YP_001788343.1 CDS CLK_2415 NC_010520.1 3289157 3290137 R hypothetical protein complement(3289157..3290137) Clostridium botulinum A3 str. Loch Maree 6152315 YP_001788344.1 CDS CLK_2416 NC_010520.1 3290139 3291497 R identified by match to protein family HMM PF00656; hypothetical protein complement(3290139..3291497) Clostridium botulinum A3 str. Loch Maree 6153367 YP_001788345.1 CDS CLK_2417 NC_010520.1 3291512 3291853 R hypothetical protein complement(3291512..3291853) Clostridium botulinum A3 str. Loch Maree 6154417 YP_001788346.1 CDS CLK_2418 NC_010520.1 3291866 3292951 R hypothetical protein complement(3291866..3292951) Clostridium botulinum A3 str. Loch Maree 6154588 YP_001788347.1 CDS CLK_2419 NC_010520.1 3292938 3293372 R identified by Glimmer3; hypothetical protein complement(3292938..3293372) Clostridium botulinum A3 str. Loch Maree 6153654 YP_001788348.1 CDS CLK_2420 NC_010520.1 3293385 3294950 R phage protein complement(3293385..3294950) Clostridium botulinum A3 str. Loch Maree 6151568 YP_001788349.1 CDS CLK_2421 NC_010520.1 3295097 3295321 R hypothetical protein complement(3295097..3295321) Clostridium botulinum A3 str. Loch Maree 6152608 YP_001788350.1 CDS CLK_2422 NC_010520.1 3295299 3295715 R hypothetical protein complement(3295299..3295715) Clostridium botulinum A3 str. Loch Maree 6153175 YP_001788351.1 CDS CLK_2423 NC_010520.1 3295730 3296617 R hypothetical protein complement(3295730..3296617) Clostridium botulinum A3 str. Loch Maree 6154459 YP_001788352.1 CDS CLK_2424 NC_010520.1 3296622 3297041 R hypothetical protein complement(3296622..3297041) Clostridium botulinum A3 str. Loch Maree 6154407 YP_001788353.1 CDS CLK_2425 NC_010520.1 3297047 3297394 R hypothetical protein complement(3297047..3297394) Clostridium botulinum A3 str. Loch Maree 6152889 YP_001788354.1 CDS CLK_2426 NC_010520.1 3297399 3297764 R hypothetical protein complement(3297399..3297764) Clostridium botulinum A3 str. Loch Maree 6154090 YP_001788355.1 CDS CLK_2427 NC_010520.1 3297764 3298048 R identified by Glimmer3; hypothetical protein complement(3297764..3298048) Clostridium botulinum A3 str. Loch Maree 6154847 YP_001788356.1 CDS CLK_2428 NC_010520.1 3298054 3298185 R identified by Glimmer3; hypothetical protein complement(3298054..3298185) Clostridium botulinum A3 str. Loch Maree 6153149 YP_001788357.1 CDS CLK_2429 NC_010520.1 3298367 3298501 R identified by Glimmer3; hypothetical protein complement(3298367..3298501) Clostridium botulinum A3 str. Loch Maree 6152296 YP_001788358.1 CDS CLK_2430 NC_010520.1 3298553 3299074 R hypothetical protein complement(3298553..3299074) Clostridium botulinum A3 str. Loch Maree 6154617 YP_001788359.1 CDS CLK_2431 NC_010520.1 3299193 3299507 R hypothetical protein complement(3299193..3299507) Clostridium botulinum A3 str. Loch Maree 6153761 YP_001788360.1 CDS CLK_2432 NC_010520.1 3299564 3300391 R hypothetical protein complement(3299564..3300391) Clostridium botulinum A3 str. Loch Maree 6154054 YP_001788361.1 CDS CLK_2433 NC_010520.1 3300354 3301259 R identified by match to protein family HMM TIGR01714; phage replisome organizer complement(3300354..3301259) Clostridium botulinum A3 str. Loch Maree 6152752 YP_001788362.1 CDS CLK_2434 NC_010520.1 3301353 3301565 R DNA-binding protein complement(3301353..3301565) Clostridium botulinum A3 str. Loch Maree 6151474 YP_001788363.1 CDS CLK_2435 NC_010520.1 3301617 3301835 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3301617..3301835) Clostridium botulinum A3 str. Loch Maree 6154863 YP_001788364.1 CDS CLK_2436 NC_010520.1 3302027 3302437 D identified by match to protein family HMM PF01381; DNA-binding protein 3302027..3302437 Clostridium botulinum A3 str. Loch Maree 6152156 YP_001788365.1 CDS CLK_2437 NC_010520.1 3302737 3302886 D identified by Glimmer3; hypothetical protein 3302737..3302886 Clostridium botulinum A3 str. Loch Maree 6154987 YP_001788366.1 CDS CLK_2439 NC_010520.1 3303963 3305450 D identified by match to protein family HMM PF03062; alginate O-acetyltransferase AlgI 3303963..3305450 Clostridium botulinum A3 str. Loch Maree 6155067 YP_001788367.1 CDS CLK_2440 NC_010520.1 3305463 3306914 D identified by Glimmer3; hypothetical protein 3305463..3306914 Clostridium botulinum A3 str. Loch Maree 6152412 YP_001788368.1 CDS CLK_2441 NC_010520.1 3307085 3307288 R identified by match to protein family HMM PF00269; small, acid-soluble spore protein complement(3307085..3307288) Clostridium botulinum A3 str. Loch Maree 6154322 YP_001788369.1 CDS CLK_2442 NC_010520.1 3307473 3307613 R identified by Glimmer3; hypothetical protein complement(3307473..3307613) Clostridium botulinum A3 str. Loch Maree 6152998 YP_001788370.1 CDS CLK_2443 NC_010520.1 3307852 3307971 R identified by Glimmer3; hypothetical protein complement(3307852..3307971) Clostridium botulinum A3 str. Loch Maree 6152679 YP_001788371.1 CDS CLK_2444 NC_010520.1 3308028 3308318 R identified by Glimmer3; hypothetical protein complement(3308028..3308318) Clostridium botulinum A3 str. Loch Maree 6151392 YP_001788372.1 CDS CLK_2445 NC_010520.1 3308459 3308587 R identified by Glimmer3; hypothetical protein complement(3308459..3308587) Clostridium botulinum A3 str. Loch Maree 6154662 YP_001788373.1 CDS CLK_2446 NC_010520.1 3308759 3309187 D identified by match to protein family HMM PF04246; sigma-E factor regulator 3308759..3309187 Clostridium botulinum A3 str. Loch Maree 6153435 YP_001788374.1 CDS aspS NC_010520.1 3309222 3311003 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(3309222..3311003) Clostridium botulinum A3 str. Loch Maree 6153027 YP_001788375.1 CDS hisS NC_010520.1 3311044 3312291 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(3311044..3312291) Clostridium botulinum A3 str. Loch Maree 6152246 YP_001788376.1 CDS CLK_2449 NC_010520.1 3312310 3313740 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3312310..3313740) Clostridium botulinum A3 str. Loch Maree 6153349 YP_001788377.1 CDS CLK_2450 NC_010520.1 3313778 3314377 R identified by match to protein family HMM PF00753; metallo-beta-lactamase complement(3313778..3314377) Clostridium botulinum A3 str. Loch Maree 6153830 YP_001788378.1 CDS dtd NC_010520.1 3314438 3314887 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(3314438..3314887) Clostridium botulinum A3 str. Loch Maree 6153592 YP_001788379.1 CDS relA NC_010520.1 3314930 3317101 R identified by match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase complement(3314930..3317101) Clostridium botulinum A3 str. Loch Maree 6154451 YP_001788380.1 CDS apt NC_010520.1 3317226 3317744 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3317226..3317744) Clostridium botulinum A3 str. Loch Maree 6151582 YP_001788381.1 CDS CLK_2454 NC_010520.1 3317853 3318731 R identified by match to protein family HMM PF01368; DHH domain-containing protein complement(3317853..3318731) Clostridium botulinum A3 str. Loch Maree 6152375 YP_001788382.1 CDS secF NC_010520.1 3318960 3319823 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(3318960..3319823) Clostridium botulinum A3 str. Loch Maree 6153224 YP_001788383.1 CDS secD NC_010520.1 3319825 3321093 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(3319825..3321093) Clostridium botulinum A3 str. Loch Maree 6154890 YP_001788384.1 CDS CLK_2457 NC_010520.1 3321187 3322554 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(3321187..3322554) Clostridium botulinum A3 str. Loch Maree 6154022 YP_001788385.1 CDS CLK_2458 NC_010520.1 3322711 3322848 R identified by Glimmer3; hypothetical protein complement(3322711..3322848) Clostridium botulinum A3 str. Loch Maree 6154821 YP_001788386.1 CDS CLK_2459 NC_010520.1 3322938 3323306 R hypothetical protein complement(3322938..3323306) Clostridium botulinum A3 str. Loch Maree 6151959 YP_001788387.1 CDS yajC NC_010520.1 3323361 3323696 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(3323361..3323696) Clostridium botulinum A3 str. Loch Maree 6154551 YP_001788388.1 CDS tgt NC_010520.1 3323877 3325007 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(3323877..3325007) Clostridium botulinum A3 str. Loch Maree 6151699 YP_001788389.1 CDS queA NC_010520.1 3325063 3326088 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(3325063..3326088) Clostridium botulinum A3 str. Loch Maree 6154104 YP_001788390.1 CDS ruvB NC_010520.1 3326122 3327150 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(3326122..3327150) Clostridium botulinum A3 str. Loch Maree 6154799 YP_001788391.1 CDS ruvA NC_010520.1 3327170 3327763 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(3327170..3327763) Clostridium botulinum A3 str. Loch Maree 6154018 YP_001788392.1 CDS CLK_2465 NC_010520.1 3327945 3328556 R hypothetical protein complement(3327945..3328556) Clostridium botulinum A3 str. Loch Maree 6152744 YP_001788393.1 CDS CLK_2466 NC_010520.1 3329254 3329994 R identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein complement(3329254..3329994) Clostridium botulinum A3 str. Loch Maree 6151966 YP_001788394.1 CDS CLK_2467 NC_010520.1 3330133 3330783 R identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257; hypothetical protein complement(3330133..3330783) Clostridium botulinum A3 str. Loch Maree 6154403 YP_001788395.1 CDS CLK_2468 NC_010520.1 3330799 3331461 R identified by match to protein family HMM PF03130; PBS lyase complement(3330799..3331461) Clostridium botulinum A3 str. Loch Maree 6153589 YP_001788396.1 CDS CLK_2469 NC_010520.1 3331548 3332966 R identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator complement(3331548..3332966) Clostridium botulinum A3 str. Loch Maree 6154350 YP_001788397.1 CDS CLK_2470 NC_010520.1 3333253 3334146 R identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein complement(3333253..3334146) Clostridium botulinum A3 str. Loch Maree 6154013 YP_001788398.1 CDS CLK_2471 NC_010520.1 3334296 3334517 R hypothetical protein complement(3334296..3334517) Clostridium botulinum A3 str. Loch Maree 6153480 YP_001788399.1 CDS CLK_2472 NC_010520.1 3334693 3334851 R identified by match to protein family HMM PF00301; rubredoxin complement(3334693..3334851) Clostridium botulinum A3 str. Loch Maree 6153949 YP_001788400.1 CDS CLK_2473 NC_010520.1 3334981 3336765 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein complement(3334981..3336765) Clostridium botulinum A3 str. Loch Maree 6152628 YP_001788401.1 CDS hpt NC_010520.1 3336907 3337431 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 3336907..3337431 Clostridium botulinum A3 str. Loch Maree 6151721 YP_001788402.1 CDS yunB NC_010520.1 3337468 3338076 R identified by match to protein family HMM TIGR02832; sporulation protein YunB complement(3337468..3338076) Clostridium botulinum A3 str. Loch Maree 6154116 YP_001788403.1 CDS CLK_2476 NC_010520.1 3338294 3340789 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; 1A family penicillin-binding protein 3338294..3340789 Clostridium botulinum A3 str. Loch Maree 6153338 YP_001788404.1 CDS CLK_2477 NC_010520.1 3340819 3341175 R identified by match to protein family HMM PF03862; match to protein family HMM TIGR02839; SpoVA family protein complement(3340819..3341175) Clostridium botulinum A3 str. Loch Maree 6152275 YP_001788405.1 CDS CLK_2478 NC_010520.1 3341192 3342199 R identified by match to protein family HMM PF07451; match to protein family HMM TIGR02845; stage V sporulation protein AD complement(3341192..3342199) Clostridium botulinum A3 str. Loch Maree 6154846 YP_001788406.1 CDS CLK_2479 NC_010520.1 3342222 3342677 R identified by match to protein family HMM PF03862; match to protein family HMM TIGR02838; SpoVA family protein complement(3342222..3342677) Clostridium botulinum A3 str. Loch Maree 6154380 YP_001788407.1 CDS sigF NC_010520.1 3342883 3343638 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the prespore at the onset of sporulation. Interaction with spoIIAB inhibits sigma F activity throughout the cell before the formation of the asymmetric septum; after septation the interaction is confined to the mother cell, and sigma F activity is released in the prespore.; sporulation sigma factor SigF complement(3342883..3343638) Clostridium botulinum A3 str. Loch Maree 6154049 YP_001788408.1 CDS spoIIAB NC_010520.1 3343657 3344079 R binds to sigma F preventing its association with RNA polymerase during sporulation; anti-sigma F factor complement(3343657..3344079) Clostridium botulinum A3 str. Loch Maree 6154262 YP_001788409.1 CDS spoIIAA NC_010520.1 3344096 3344431 R identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; match to protein family HMM TIGR02886; anti-sigma F factor antagonist complement(3344096..3344431) Clostridium botulinum A3 str. Loch Maree 6151329 YP_001788410.1 CDS CLK_2483 NC_010520.1 3344532 3344777 D spermidine synthase 3344532..3344777 Clostridium botulinum A3 str. Loch Maree 6152690 YP_001788411.1 CDS CLK_2484 NC_010520.1 3344915 3346648 R modification methylase complement(3344915..3346648) Clostridium botulinum A3 str. Loch Maree 6153265 YP_001788412.1 CDS CLK_2485 NC_010520.1 3346715 3347689 D identified by match to protein family HMM PF01522; match to protein family HMM TIGR02884; polysaccharide deacetylase 3346715..3347689 Clostridium botulinum A3 str. Loch Maree 6153859 YP_001788413.1 CDS CLK_2486 NC_010520.1 3347780 3348526 R identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; WecB/TagA/CpsF family glycosyl transferase complement(3347780..3348526) Clostridium botulinum A3 str. Loch Maree 6151654 YP_001788414.1 CDS CLK_2487 NC_010520.1 3348852 3349505 R identified by match to protein family HMM PF02397; sugar transferase complement(3348852..3349505) Clostridium botulinum A3 str. Loch Maree 6152055 YP_001788415.1 CDS CLK_2488 NC_010520.1 3349526 3350950 R identified by match to protein family HMM PF01943; polysaccharide transporter complement(3349526..3350950) Clostridium botulinum A3 str. Loch Maree 6153100 YP_001788416.1 CDS mviN NC_010520.1 3351344 3352900 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN complement(3351344..3352900) Clostridium botulinum A3 str. Loch Maree 6153254 YP_001788417.1 CDS CLK_2490 NC_010520.1 3352919 3354022 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3352919..3354022) Clostridium botulinum A3 str. Loch Maree 6152167 YP_001788418.1 CDS CLK_2491 NC_010520.1 3354113 3355240 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3354113..3355240) Clostridium botulinum A3 str. Loch Maree 6154705 YP_001788419.1 CDS CLK_2492 NC_010520.1 3355355 3356587 R identified by match to protein family HMM PF04932; exopolysaccharide biosynthesis family protein complement(3355355..3356587) Clostridium botulinum A3 str. Loch Maree 6153663 YP_001788420.1 CDS CLK_2493 NC_010520.1 3356665 3357891 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3356665..3357891) Clostridium botulinum A3 str. Loch Maree 6152662 YP_001788421.1 CDS CLK_2494 NC_010520.1 3357910 3358968 R identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase complement(3357910..3358968) Clostridium botulinum A3 str. Loch Maree 6151636 YP_001788422.1 CDS CLK_2495 NC_010520.1 3358968 3360062 R identified by match to protein family HMM PF00534; glycoside hydrolase family protein complement(3358968..3360062) Clostridium botulinum A3 str. Loch Maree 6154278 YP_001788423.1 CDS CLK_2496 NC_010520.1 3360085 3361188 R identified by Glimmer3; hypothetical protein complement(3360085..3361188) Clostridium botulinum A3 str. Loch Maree 6153282 YP_001788424.1 CDS CLK_2497 NC_010520.1 3361178 3362596 R hypothetical protein complement(3361178..3362596) Clostridium botulinum A3 str. Loch Maree 6153945 YP_001788425.1 CDS CLK_2498 NC_010520.1 3362611 3363705 R identified by match to protein family HMM PF00560; internalin complement(3362611..3363705) Clostridium botulinum A3 str. Loch Maree 6152426 YP_001788426.1 CDS CLK_2499 NC_010520.1 3363742 3365049 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(3363742..3365049) Clostridium botulinum A3 str. Loch Maree 6151944 YP_001788427.1 CDS CLK_2500 NC_010520.1 3365080 3365826 R identified by match to protein family HMM PF00132; acetyltransferase complement(3365080..3365826) Clostridium botulinum A3 str. Loch Maree 6154964 YP_001788428.1 CDS CLK_2501 NC_010520.1 3365926 3367035 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; NAD-binding Rossmann fold family oxidoreductase complement(3365926..3367035) Clostridium botulinum A3 str. Loch Maree 6152104 YP_001788429.1 CDS CLK_2502 NC_010520.1 3367098 3368414 R identified by match to protein family HMM PF00984; match to protein family HMM PF03446; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose/GDP-mannose dehydrogenase complement(3367098..3368414) Clostridium botulinum A3 str. Loch Maree 6152869 YP_001788430.1 CDS CLK_2503 NC_010520.1 3368544 3370409 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; exopolysaccharide biosynthesis protein complement(3368544..3370409) Clostridium botulinum A3 str. Loch Maree 6153806 YP_001788431.1 CDS CLK_2504 NC_010520.1 3370590 3373484 R identified by match to protein family HMM PF01520; match to protein family HMM PF07495; N-acetylmuramoyl-L-alanine amidase complement(3370590..3373484) Clostridium botulinum A3 str. Loch Maree 6154569 YP_001788432.1 CDS CLK_2505 NC_010520.1 3373664 3376876 R identified by match to protein family HMM PF01520; match to protein family HMM PF07495; N-acetylmuramoyl-L-alanine amidase complement(3373664..3376876) Clostridium botulinum A3 str. Loch Maree 6152622 YP_001788433.1 CDS CLK_2506 NC_010520.1 3377066 3380530 R identified by match to protein family HMM PF01832; match to protein family HMM PF07495; beta-N-acetylglucosaminidase complement(3377066..3380530) Clostridium botulinum A3 str. Loch Maree 6153405 YP_001788434.1 CDS galU NC_010520.1 3380629 3381525 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase complement(3380629..3381525) Clostridium botulinum A3 str. Loch Maree 6153400 YP_001788435.1 CDS CLK_2508 NC_010520.1 3381575 3382651 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3381575..3382651) Clostridium botulinum A3 str. Loch Maree 6152475 YP_001788436.1 CDS CLK_2509 NC_010520.1 3382796 3384523 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase complement(3382796..3384523) Clostridium botulinum A3 str. Loch Maree 6151681 YP_001788437.1 CDS CLK_2510 NC_010520.1 3385154 3385690 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(3385154..3385690) Clostridium botulinum A3 str. Loch Maree 6154484 YP_001788438.1 CDS CLK_2511 NC_010520.1 3385897 3387357 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF01276; match to protein family HMM PF03711; match to protein family HMM PF05889; Orn/Lys/Arg decarboxylase 3385897..3387357 Clostridium botulinum A3 str. Loch Maree 6153983 YP_001788439.1 CDS CLK_2512 NC_010520.1 3387543 3388376 R identified by Glimmer3; hypothetical protein complement(3387543..3388376) Clostridium botulinum A3 str. Loch Maree 6152332 YP_001788440.1 CDS CLK_2513 NC_010520.1 3388762 3389664 R identified by match to protein family HMM PF01515; phosphate acetyl/butyryl transferase complement(3388762..3389664) Clostridium botulinum A3 str. Loch Maree 6154312 YP_001788441.1 CDS CLK_2514 NC_010520.1 3390271 3391284 R identified by match to protein family HMM PF01070; match to protein family HMM PF01180; match to protein family HMM PF01645; dehydrogenase, FMN-dependent complement(3390271..3391284) Clostridium botulinum A3 str. Loch Maree 6153010 YP_001788442.1 CDS CLK_2515 NC_010520.1 3391520 3391990 R identified by match to protein family HMM PF04463; hypothetical protein complement(3391520..3391990) Clostridium botulinum A3 str. Loch Maree 6152683 YP_001788443.1 CDS CLK_2516 NC_010520.1 3392178 3394544 R MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein complement(3392178..3394544) Clostridium botulinum A3 str. Loch Maree 6151378 YP_001788444.1 CDS CLK_2517 NC_010520.1 3394808 3397174 R identified by match to protein family HMM PF01136; U32 family peptidase complement(3394808..3397174) Clostridium botulinum A3 str. Loch Maree 6154657 YP_001788445.1 CDS CLK_2518 NC_010520.1 3397898 3398776 R hypothetical protein complement(3397898..3398776) Clostridium botulinum A3 str. Loch Maree 6153427 YP_001788446.1 CDS CLK_2519 NC_010520.1 3398981 3400756 D identified by Glimmer3; hypothetical protein 3398981..3400756 Clostridium botulinum A3 str. Loch Maree 6153033 YP_001788447.1 CDS CLK_2520 NC_010520.1 3400927 3401523 R identified by Glimmer3; hypothetical protein complement(3400927..3401523) Clostridium botulinum A3 str. Loch Maree 6153269 YP_001788448.1 CDS CLK_2521 NC_010520.1 3402322 3402912 R identified by match to protein family HMM PF05164; hypothetical protein complement(3402322..3402912) Clostridium botulinum A3 str. Loch Maree 6154628 YP_001788449.1 CDS pheT NC_010520.1 3403117 3405501 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3403117..3405501) Clostridium botulinum A3 str. Loch Maree 6151999 YP_001788450.1 CDS pheS NC_010520.1 3405662 3406681 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3405662..3406681) Clostridium botulinum A3 str. Loch Maree 6154979 YP_001788451.1 CDS CLK_2524 NC_010520.1 3407028 3407807 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase complement(3407028..3407807) Clostridium botulinum A3 str. Loch Maree 6151437 YP_001788452.1 CDS CLK_2525 NC_010520.1 3407916 3408578 R identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkA family potassium uptake protein complement(3407916..3408578) Clostridium botulinum A3 str. Loch Maree 6152895 YP_001788453.1 CDS CLK_2526 NC_010520.1 3408589 3409932 R identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; TrkH family potassium uptake protein complement(3408589..3409932) Clostridium botulinum A3 str. Loch Maree 6153882 YP_001788454.1 CDS rplT NC_010520.1 3410056 3410415 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3410056..3410415) Clostridium botulinum A3 str. Loch Maree 6153719 YP_001788455.1 CDS rpmI NC_010520.1 3410445 3410642 R identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 complement(3410445..3410642) Clostridium botulinum A3 str. Loch Maree 6154749 YP_001788456.1 CDS infC NC_010520.1 3410664 3411218 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(3410664..3411218) Clostridium botulinum A3 str. Loch Maree 6152670 YP_001788457.1 CDS thrS NC_010520.1 3411473 3413380 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3411473..3413380) Clostridium botulinum A3 str. Loch Maree 6153789 YP_001788458.1 CDS CLK_2531 NC_010520.1 3413728 3414627 R identified by match to protein family HMM PF08812; match to protein family HMM TIGR02834; hypothetical protein complement(3413728..3414627) Clostridium botulinum A3 str. Loch Maree 6152947 YP_001788459.1 CDS CLK_2532 NC_010520.1 3414782 3415489 D hypothetical protein 3414782..3415489 Clostridium botulinum A3 str. Loch Maree 6152154 YP_001788460.1 CDS CLK_2533 NC_010520.1 3415680 3417251 R ABC transporter permease complement(3415680..3417251) Clostridium botulinum A3 str. Loch Maree 6152159 YP_001788461.1 CDS CLK_2534 NC_010520.1 3417253 3417948 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3417253..3417948) Clostridium botulinum A3 str. Loch Maree 6153215 YP_001788462.1 CDS hslO NC_010520.1 3418726 3419616 R becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin complement(3418726..3419616) Clostridium botulinum A3 str. Loch Maree 6155032 YP_001788463.1 CDS CLK_2541 NC_010520.1 3419654 3420394 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(3419654..3420394) Clostridium botulinum A3 str. Loch Maree 6151647 YP_001788464.1 CDS CLK_2542 NC_010520.1 3420480 3420752 R small acid-soluble spore protein complement(3420480..3420752) Clostridium botulinum A3 str. Loch Maree 6153191 YP_001788465.1 CDS CLK_2543 NC_010520.1 3421063 3422022 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3421063..3422022) Clostridium botulinum A3 str. Loch Maree 6152472 YP_001788466.1 CDS CLK_2544 NC_010520.1 3422022 3423041 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; oligopeptide/dipeptide ABC transporter ATP-binding protein complement(3422022..3423041) Clostridium botulinum A3 str. Loch Maree 6151767 YP_001788467.1 CDS CLK_2545 NC_010520.1 3423056 3423973 R identified by match to protein family HMM PF00528; oligopeptide/dipeptide ABC transporter permease complement(3423056..3423973) Clostridium botulinum A3 str. Loch Maree 6152698 YP_001788468.1 CDS CLK_2546 NC_010520.1 3423989 3424918 R identified by match to protein family HMM PF00528; oligopeptide/dipeptide ABC transporter permease complement(3423989..3424918) Clostridium botulinum A3 str. Loch Maree 6151634 YP_001788469.1 CDS CLK_2547 NC_010520.1 3424999 3426681 R identified by match to protein family HMM PF00496; oligopeptide/dipeptide ABC transporter oligopeptide/dipeptide-binding protein complement(3424999..3426681) Clostridium botulinum A3 str. Loch Maree 6154291 YP_001788470.1 CDS asd NC_010520.1 3427165 3428157 D identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 3427165..3428157 Clostridium botulinum A3 str. Loch Maree 6152333 YP_001788471.1 CDS dapA NC_010520.1 3428180 3429058 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3428180..3429058 Clostridium botulinum A3 str. Loch Maree 6152220 YP_001788472.1 CDS dapB NC_010520.1 3429288 3430043 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3429288..3430043 Clostridium botulinum A3 str. Loch Maree 6154881 YP_001788473.1 CDS CLK_2551 NC_010520.1 3430357 3431526 R identified by match to protein family HMM PF00155; aminotransferase, classes I and II complement(3430357..3431526) Clostridium botulinum A3 str. Loch Maree 6153860 YP_001788474.1 CDS CLK_2552 NC_010520.1 3431784 3432494 D identified by match to protein family HMM PF00132; match to protein family HMM PF08503; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3431784..3432494 Clostridium botulinum A3 str. Loch Maree 6154174 YP_001788475.1 CDS CLK_2553 NC_010520.1 3432610 3433311 R binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein complement(3432610..3433311) Clostridium botulinum A3 str. Loch Maree 6153626 YP_001788476.1 CDS CLK_2554 NC_010520.1 3433389 3433886 R hypothetical protein complement(3433389..3433886) Clostridium botulinum A3 str. Loch Maree 6152578 YP_001788477.1 CDS CLK_2555 NC_010520.1 3434085 3434837 R identified by match to protein family HMM PF01522; match to protein family HMM TIGR02764; polysaccharide deacetylase complement(3434085..3434837) Clostridium botulinum A3 str. Loch Maree 6154329 YP_001788478.1 CDS CLK_2556 NC_010520.1 3435001 3435528 D hypothetical protein 3435001..3435528 Clostridium botulinum A3 str. Loch Maree 6151487 YP_001788479.1 CDS CLK_2557 NC_010520.1 3435531 3436415 R hypothetical protein complement(3435531..3436415) Clostridium botulinum A3 str. Loch Maree 6152458 YP_001788480.1 CDS CLK_2558 NC_010520.1 3436555 3436815 D hypothetical protein 3436555..3436815 Clostridium botulinum A3 str. Loch Maree 6153618 YP_001788481.1 CDS folC NC_010520.1 3436824 3438113 R identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3436824..3438113) Clostridium botulinum A3 str. Loch Maree 6154336 YP_001788482.1 CDS valS NC_010520.1 3438540 3441185 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(3438540..3441185) Clostridium botulinum A3 str. Loch Maree 6151504 YP_001788483.1 CDS CLK_2561 NC_010520.1 3441206 3441712 R identified by match to protein family HMM PF00583; acetyltransferase complement(3441206..3441712) Clostridium botulinum A3 str. Loch Maree 6152691 YP_001788484.1 CDS CLK_2562 NC_010520.1 3442057 3442182 R identified by Glimmer3; hypothetical protein complement(3442057..3442182) Clostridium botulinum A3 str. Loch Maree 6153898 YP_001788485.1 CDS CLK_2563 NC_010520.1 3442337 3443092 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3442337..3443092) Clostridium botulinum A3 str. Loch Maree 6153343 YP_001788486.1 CDS CLK_2564 NC_010520.1 3443095 3445590 R identified by match to protein family HMM PF02687; ABC transporter permease complement(3443095..3445590) Clostridium botulinum A3 str. Loch Maree 6151815 YP_001788487.1 CDS CLK_2565 NC_010520.1 3446424 3447080 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3446424..3447080) Clostridium botulinum A3 str. Loch Maree 6153549 YP_001788488.1 CDS CLK_2566 NC_010520.1 3447096 3449693 R identified by match to protein family HMM PF02687; ABC transporter permease complement(3447096..3449693) Clostridium botulinum A3 str. Loch Maree 6153829 YP_001788489.1 CDS CLK_2567 NC_010520.1 3450174 3451202 D ABC transporter substrate-binding protein 3450174..3451202 Clostridium botulinum A3 str. Loch Maree 6151640 YP_001788490.1 CDS CLK_2568 NC_010520.1 3451574 3455866 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase complement(3451574..3455866) Clostridium botulinum A3 str. Loch Maree 6151523 YP_001788491.1 CDS CLK_2569 NC_010520.1 3456188 3456949 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3456188..3456949 Clostridium botulinum A3 str. Loch Maree 6152314 YP_001788492.1 CDS CLK_2570 NC_010520.1 3456946 3457749 D identified by match to protein family HMM PF00528; ABC transporter permease 3456946..3457749 Clostridium botulinum A3 str. Loch Maree 6152788 YP_001788493.1 CDS CLK_2571 NC_010520.1 3457894 3458241 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; hypothetical protein 3457894..3458241 Clostridium botulinum A3 str. Loch Maree 6154083 YP_001788494.1 CDS CLK_2572 NC_010520.1 3458364 3459539 R identified by match to protein family HMM PF01841; transglutaminase domain-containing protein complement(3458364..3459539) Clostridium botulinum A3 str. Loch Maree 6154371 YP_001788495.1 CDS recX NC_010520.1 3459564 3460499 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(3459564..3460499) Clostridium botulinum A3 str. Loch Maree 6151903 YP_001788496.1 CDS CLK_2574 NC_010520.1 3460521 3461750 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase complement(3460521..3461750) Clostridium botulinum A3 str. Loch Maree 6152278 YP_001788497.1 CDS CLK_2575 NC_010520.1 3461971 3462474 D identified by match to protein family HMM PF06177; hypothetical protein 3461971..3462474 Clostridium botulinum A3 str. Loch Maree 6154199 YP_001788498.1 CDS CLK_2576 NC_010520.1 3462512 3463099 D identified by match to protein family HMM PF01613; flavin reductase 3462512..3463099 Clostridium botulinum A3 str. Loch Maree 6151521 YP_001788499.1 CDS CLK_2577 NC_010520.1 3463157 3463852 D identified by match to protein family HMM PF01471; match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 3463157..3463852 Clostridium botulinum A3 str. Loch Maree 6152517 YP_001788500.1 CDS CLK_2578 NC_010520.1 3463887 3464762 R hypothetical protein complement(3463887..3464762) Clostridium botulinum A3 str. Loch Maree 6153479 YP_001788501.1 CDS CLK_2579 NC_010520.1 3464804 3465082 R identified by match to protein family HMM PF06865; hypothetical protein complement(3464804..3465082) Clostridium botulinum A3 str. Loch Maree 6154725 YP_001788502.1 CDS proC NC_010520.1 3465211 3466017 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(3465211..3466017) Clostridium botulinum A3 str. Loch Maree 6152099 YP_001788503.1 CDS CLK_2581 NC_010520.1 3466128 3468491 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; formate acetyltransferase complement(3466128..3468491) Clostridium botulinum A3 str. Loch Maree 6152953 YP_001788504.1 CDS CLK_2582 NC_010520.1 3468498 3469400 R identified by match to protein family HMM PF00037; match to protein family HMM PF04055; match to protein family HMM TIGR02494; glycyl-radical enzyme activating family protein complement(3468498..3469400) Clostridium botulinum A3 str. Loch Maree 6153938 YP_001788505.1 CDS CLK_2583 NC_010520.1 3469451 3470020 R identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein complement(3469451..3470020) Clostridium botulinum A3 str. Loch Maree 6154575 YP_001788506.1 CDS CLK_2584 NC_010520.1 3470664 3471392 R identified by match to protein family HMM PF00533; hypothetical protein complement(3470664..3471392) Clostridium botulinum A3 str. Loch Maree 6154173 YP_001788507.1 CDS CLK_2585 NC_010520.1 3471429 3471770 R identified by Glimmer3; hypothetical protein complement(3471429..3471770) Clostridium botulinum A3 str. Loch Maree 6153512 YP_001788508.1 CDS CLK_2586 NC_010520.1 3471782 3473518 R identified by match to protein family HMM PF00092; von Willebrand factor A complement(3471782..3473518) Clostridium botulinum A3 str. Loch Maree 6153675 YP_001788509.1 CDS CLK_2587 NC_010520.1 3473541 3474869 R identified by match to protein family HMM PF07728; ATPase AAA complement(3473541..3474869) Clostridium botulinum A3 str. Loch Maree 6154734 YP_001788510.1 CDS CLK_2588 NC_010520.1 3475509 3476585 D hypothetical protein 3475509..3476585 Clostridium botulinum A3 str. Loch Maree 6154761 YP_001788511.1 CDS CLK_2589 NC_010520.1 3476653 3477738 D hypothetical protein 3476653..3477738 Clostridium botulinum A3 str. Loch Maree 6151837 YP_001788512.1 CDS CLK_2590 NC_010520.1 3477917 3478117 R identified by match to protein family HMM PF00037; (Fe-S)-binding protein complement(3477917..3478117) Clostridium botulinum A3 str. Loch Maree 6153567 YP_001788513.1 CDS CLK_2591 NC_010520.1 3478352 3479245 D hypothetical protein 3478352..3479245 Clostridium botulinum A3 str. Loch Maree 6154346 YP_001788514.1 CDS CLK_2592 NC_010520.1 3479248 3480345 D R-2-hydroxyglutaryl-CoA dehydratase subunit 3479248..3480345 Clostridium botulinum A3 str. Loch Maree 6152497 YP_001788515.1 CDS CLK_2593 NC_010520.1 3480326 3481300 D identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase 3480326..3481300 Clostridium botulinum A3 str. Loch Maree 6151718 YP_001788516.1 CDS CLK_2594 NC_010520.1 3481365 3482993 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator complement(3481365..3482993) Clostridium botulinum A3 str. Loch Maree 6151831 YP_001788517.1 CDS CLK_2595 NC_010520.1 3483349 3484356 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(3483349..3484356) Clostridium botulinum A3 str. Loch Maree 6151571 YP_001788518.1 CDS CLK_2596 NC_010520.1 3484369 3485148 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(3484369..3485148) Clostridium botulinum A3 str. Loch Maree 6153954 YP_001788519.1 CDS bcd NC_010520.1 3485160 3486299 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; butyryl-CoA dehydrogenase complement(3485160..3486299) Clostridium botulinum A3 str. Loch Maree 6153243 YP_001788520.1 CDS CLK_2598 NC_010520.1 3486492 3487670 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(3486492..3487670) Clostridium botulinum A3 str. Loch Maree 6152806 YP_001788521.1 CDS hbd NC_010520.1 3487695 3488525 R identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase complement(3487695..3488525) Clostridium botulinum A3 str. Loch Maree 6151747 YP_001788522.1 CDS crt NC_010520.1 3488556 3489338 R identified by match to protein family HMM PF00378; 3-hydroxybutyryl-CoA dehydratase complement(3488556..3489338) Clostridium botulinum A3 str. Loch Maree 6154418 YP_001788523.1 CDS CLK_2601 NC_010520.1 3489753 3489971 R identified by Glimmer3; hypothetical protein complement(3489753..3489971) Clostridium botulinum A3 str. Loch Maree 6153176 YP_001788524.1 CDS CLK_2602 NC_010520.1 3490015 3491112 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(3490015..3491112) Clostridium botulinum A3 str. Loch Maree 6153202 YP_001788525.1 CDS CLK_2603 NC_010520.1 3491388 3492680 R identified by match to protein family HMM PF00860; xanthine/uracil permease complement(3491388..3492680) Clostridium botulinum A3 str. Loch Maree 6152219 YP_001788526.1 CDS CLK_2604 NC_010520.1 3493082 3493978 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein complement(3493082..3493978) Clostridium botulinum A3 str. Loch Maree 6154877 YP_001788527.1 CDS CLK_2605 NC_010520.1 3494047 3494199 R identified by Glimmer3; hypothetical protein complement(3494047..3494199) Clostridium botulinum A3 str. Loch Maree 6152267 YP_001788528.1 CDS lgt NC_010520.1 3495041 3495805 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(3495041..3495805) Clostridium botulinum A3 str. Loch Maree 6153294 YP_001788529.1 CDS CLK_2607 NC_010520.1 3496013 3496477 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(3496013..3496477) Clostridium botulinum A3 str. Loch Maree 6153453 YP_001788530.1 CDS CLK_2608 NC_010520.1 3496520 3496885 R hypothetical protein complement(3496520..3496885) Clostridium botulinum A3 str. Loch Maree 6154490 YP_001788531.1 CDS CLK_2609 NC_010520.1 3497016 3497765 D identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 3497016..3497765 Clostridium botulinum A3 str. Loch Maree 6154782 YP_001788532.1 CDS CLK_2610 NC_010520.1 3498047 3500053 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(3498047..3500053) Clostridium botulinum A3 str. Loch Maree 6152092 YP_001788533.1 CDS CLK_2611 NC_010520.1 3500249 3500794 R identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubredoxin/rubrerythrin complement(3500249..3500794) Clostridium botulinum A3 str. Loch Maree 6153947 YP_001788534.1 CDS pflA NC_010520.1 3501413 3502111 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme complement(3501413..3502111) Clostridium botulinum A3 str. Loch Maree 6154977 YP_001788535.1 CDS pfl NC_010520.1 3502291 3504519 R identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1 complement(3502291..3504519) Clostridium botulinum A3 str. Loch Maree 6151382 YP_001788536.1 CDS CLK_2614 NC_010520.1 3505032 3505283 R hypothetical protein complement(3505032..3505283) Clostridium botulinum A3 str. Loch Maree 6152402 YP_001788537.1 CDS CLK_2615 NC_010520.1 3505478 3506047 R identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 complement(3505478..3506047) Clostridium botulinum A3 str. Loch Maree 6152265 YP_001788538.1 CDS CLK_2616 NC_010520.1 3506214 3506828 R lipoprotein complement(3506214..3506828) Clostridium botulinum A3 str. Loch Maree 6152008 YP_001788539.1 CDS CLK_2617 NC_010520.1 3507055 3507483 D identified by match to protein family HMM PF01475; FUR family transcriptional regulator 3507055..3507483 Clostridium botulinum A3 str. Loch Maree 6154267 YP_001788540.1 CDS CLK_2618 NC_010520.1 3507552 3508787 R identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein complement(3507552..3508787) Clostridium botulinum A3 str. Loch Maree 6153291 YP_001788541.1 CDS CLK_2619 NC_010520.1 3508888 3509823 D hypothetical protein 3508888..3509823 Clostridium botulinum A3 str. Loch Maree 6151798 YP_001788542.1 CDS CLK_2620 NC_010520.1 3509983 3510939 R identified by match to protein family HMM PF08279; hypothetical protein complement(3509983..3510939) Clostridium botulinum A3 str. Loch Maree 6151680 YP_001788543.1 CDS CLK_2621 NC_010520.1 3511154 3511576 R hypothetical protein complement(3511154..3511576) Clostridium botulinum A3 str. Loch Maree 6153900 YP_001788544.1 CDS CLK_2622 NC_010520.1 3511631 3511876 R identified by Glimmer3; hypothetical protein complement(3511631..3511876) Clostridium botulinum A3 str. Loch Maree 6152893 YP_001788545.1 CDS CLK_2623 NC_010520.1 3511928 3512359 R identified by Glimmer3; hypothetical protein complement(3511928..3512359) Clostridium botulinum A3 str. Loch Maree 6151381 YP_001788546.1 CDS CLK_2624 NC_010520.1 3512578 3513303 R identified by match to protein family HMM PF02517; CAAX amino terminal protease complement(3512578..3513303) Clostridium botulinum A3 str. Loch Maree 6154285 YP_001788547.1 CDS engB NC_010520.1 3513327 3513911 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(3513327..3513911) Clostridium botulinum A3 str. Loch Maree 6154758 YP_001788548.1 CDS lon NC_010520.1 3513926 3516247 R identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La complement(3513926..3516247) Clostridium botulinum A3 str. Loch Maree 6152098 YP_001788549.1 CDS lonB NC_010520.1 3516385 3518064 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM TIGR02902; ATP-dependent protease LonB complement(3516385..3518064) Clostridium botulinum A3 str. Loch Maree 6153689 YP_001788550.1 CDS clpX NC_010520.1 3518192 3519481 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(3518192..3519481) Clostridium botulinum A3 str. Loch Maree 6154760 YP_001788551.1 CDS clpP NC_010520.1 3519501 3520085 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(3519501..3520085) Clostridium botulinum A3 str. Loch Maree 6154740 YP_001788552.1 CDS tig NC_010520.1 3520211 3521503 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(3520211..3521503) Clostridium botulinum A3 str. Loch Maree 6153683 YP_001788553.1 CDS CLK_2631 NC_010520.1 3521681 3522466 R identified by match to protein family HMM PF01261; AP endonuclease complement(3521681..3522466) Clostridium botulinum A3 str. Loch Maree 6154236 YP_001788554.1 CDS CLK_2632 NC_010520.1 3522577 3523389 R hypothetical protein complement(3522577..3523389) Clostridium botulinum A3 str. Loch Maree 6151567 YP_001788555.1 CDS pyrE NC_010520.1 3523604 3524179 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(3523604..3524179) Clostridium botulinum A3 str. Loch Maree 6152034 YP_001788556.1 CDS pyrD NC_010520.1 3524213 3525109 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(3524213..3525109) Clostridium botulinum A3 str. Loch Maree 6153065 YP_001788557.1 CDS pyrK NC_010520.1 3525109 3525864 R responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+); dihydroorotate dehydrogenase electron transfer subunit complement(3525109..3525864) Clostridium botulinum A3 str. Loch Maree 6151391 YP_001788558.1 CDS pyrF NC_010520.1 3526009 3526860 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(3526009..3526860) Clostridium botulinum A3 str. Loch Maree 6152411 YP_001788559.1 CDS pyrC NC_010520.1 3526883 3528073 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; dihydroorotase, multifunctional complex type complement(3526883..3528073) Clostridium botulinum A3 str. Loch Maree 6153731 YP_001788560.1 CDS pyrI NC_010520.1 3528095 3528535 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(3528095..3528535) Clostridium botulinum A3 str. Loch Maree 6154777 YP_001788561.1 CDS pyrB NC_010520.1 3528537 3529460 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(3528537..3529460) Clostridium botulinum A3 str. Loch Maree 6152141 YP_001788562.1 CDS CLK_2640 NC_010520.1 3529715 3530473 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; CoA-substrate-specific enzyme activase complement(3529715..3530473) Clostridium botulinum A3 str. Loch Maree 6153201 YP_001788563.1 CDS CLK_2641 NC_010520.1 3530496 3530747 R hypothetical protein complement(3530496..3530747) Clostridium botulinum A3 str. Loch Maree 6154296 YP_001788564.1 CDS CLK_2642 NC_010520.1 3531075 3532334 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3531075..3532334) Clostridium botulinum A3 str. Loch Maree 6151556 YP_001788565.1 CDS CLK_2643 NC_010520.1 3532463 3533611 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3532463..3533611) Clostridium botulinum A3 str. Loch Maree 6152583 YP_001788566.1 CDS CLK_2644 NC_010520.1 3533723 3534055 R hypothetical protein complement(3533723..3534055) Clostridium botulinum A3 str. Loch Maree 6153665 YP_001788567.1 CDS CLK_2645 NC_010520.1 3534101 3534850 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3534101..3534850) Clostridium botulinum A3 str. Loch Maree 6154030 YP_001788568.1 CDS CLK_2646 NC_010520.1 3534850 3534987 R identified by Glimmer3; hypothetical protein complement(3534850..3534987) Clostridium botulinum A3 str. Loch Maree 6154820 YP_001788569.1 CDS CLK_2647 NC_010520.1 3535027 3535569 R identified by match to protein family HMM PF00528; ABC transporter permease complement(3535027..3535569) Clostridium botulinum A3 str. Loch Maree 6152535 YP_001788570.1 CDS CLK_2648 NC_010520.1 3535617 3536153 R identified by Glimmer3; hypothetical protein complement(3535617..3536153) Clostridium botulinum A3 str. Loch Maree 6151829 YP_001788571.1 CDS CLK_2649 NC_010520.1 3536205 3536423 R identified by Glimmer3; hypothetical protein complement(3536205..3536423) Clostridium botulinum A3 str. Loch Maree 6154699 YP_001788572.1 CDS CLK_2650 NC_010520.1 3536430 3537530 R lipoprotein complement(3536430..3537530) Clostridium botulinum A3 str. Loch Maree 6153896 YP_001788573.1 CDS CLK_2651 NC_010520.1 3537548 3538012 R lipoprotein complement(3537548..3538012) Clostridium botulinum A3 str. Loch Maree 6153032 YP_001788574.1 CDS CLK_2652 NC_010520.1 3538028 3539119 R identified by match to protein family HMM PF03773; permease complement(3538028..3539119) Clostridium botulinum A3 str. Loch Maree 6152182 YP_001788575.1 CDS CLK_2653 NC_010520.1 3539119 3539379 R identified by Glimmer3; hypothetical protein complement(3539119..3539379) Clostridium botulinum A3 str. Loch Maree 6153266 YP_001788576.1 CDS CLK_2654 NC_010520.1 3539535 3539765 R sodium:dicarboxylate symporter family protein complement(3539535..3539765) Clostridium botulinum A3 str. Loch Maree 6152480 YP_001788577.1 CDS CLK_2677 NC_010520.1 3542089 3542559 R identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase complement(3542089..3542559) Clostridium botulinum A3 str. Loch Maree 6155073 YP_001788578.1 CDS CLK_2678 NC_010520.1 3542577 3543176 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(3542577..3543176) Clostridium botulinum A3 str. Loch Maree 6151554 YP_001788579.1 CDS CLK_2679 NC_010520.1 3543280 3544653 D hypothetical protein 3543280..3544653 Clostridium botulinum A3 str. Loch Maree 6154963 YP_001788580.1 CDS CLK_2680 NC_010520.1 3544766 3544921 D hypothetical protein 3544766..3544921 Clostridium botulinum A3 str. Loch Maree 6152307 YP_001788581.1 CDS CLK_2681 NC_010520.1 3544924 3546486 R identified by match to protein family HMM PF00496; solute-binding family 5 protein complement(3544924..3546486) Clostridium botulinum A3 str. Loch Maree 6152881 YP_001788582.1 CDS gatB NC_010520.1 3546640 3548070 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(3546640..3548070) Clostridium botulinum A3 str. Loch Maree 6151952 YP_001788583.1 CDS gatA NC_010520.1 3548107 3549564 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(3548107..3549564) Clostridium botulinum A3 str. Loch Maree 6154621 YP_001788584.1 CDS gatC NC_010520.1 3549601 3549888 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(3549601..3549888) Clostridium botulinum A3 str. Loch Maree 6151710 YP_001788585.1 CDS CLK_2685 NC_010520.1 3550024 3551235 R identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein complement(3550024..3551235) Clostridium botulinum A3 str. Loch Maree 6153050 YP_001788586.1 CDS CLK_2686 NC_010520.1 3551610 3551879 R hypothetical protein complement(3551610..3551879) Clostridium botulinum A3 str. Loch Maree 6153834 YP_001788587.1 CDS ligA NC_010520.1 3551980 3553974 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(3551980..3553974) Clostridium botulinum A3 str. Loch Maree 6152696 YP_001788588.1 CDS pcrA NC_010520.1 3553986 3556202 R identified by match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA complement(3553986..3556202) Clostridium botulinum A3 str. Loch Maree 6154671 YP_001788589.1 CDS CLK_2689 NC_010520.1 3556329 3556628 R identified by match to protein family HMM PF01371; match to protein family HMM TIGR02531; TrpR family protein complement(3556329..3556628) Clostridium botulinum A3 str. Loch Maree 6151932 YP_001788590.1 CDS CLK_2690 NC_010520.1 3556926 3557642 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase complement(3556926..3557642) Clostridium botulinum A3 str. Loch Maree 6153120 YP_001788591.1 CDS CLK_2691 NC_010520.1 3557726 3558397 R identified by match to protein family HMM PF01464; Slt family transglycosylase complement(3557726..3558397) Clostridium botulinum A3 str. Loch Maree 6153295 YP_001788592.1 CDS CLK_2692 NC_010520.1 3558456 3560459 R identified by match to protein family HMM PF07495; triple tyrosine motif-containing protein complement(3558456..3560459) Clostridium botulinum A3 str. Loch Maree 6154214 YP_001788593.1 CDS CLK_2693 NC_010520.1 3560593 3560760 D identified by Glimmer3; hypothetical protein 3560593..3560760 Clostridium botulinum A3 str. Loch Maree 6151783 YP_001788594.1 CDS CLK_2694 NC_010520.1 3561174 3561608 R identified by match to protein family HMM PF02639; hypothetical protein complement(3561174..3561608) Clostridium botulinum A3 str. Loch Maree 6152593 YP_001788595.1 CDS pgi NC_010520.1 3561619 3562971 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(3561619..3562971) Clostridium botulinum A3 str. Loch Maree 6154817 YP_001788596.1 CDS CLK_2696 NC_010520.1 3563055 3563225 R hypothetical protein complement(3563055..3563225) Clostridium botulinum A3 str. Loch Maree 6151909 YP_001788597.1 CDS CLK_2697 NC_010520.1 3563535 3564179 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3563535..3564179) Clostridium botulinum A3 str. Loch Maree 6152259 YP_001788598.1 CDS CLK_2698 NC_010520.1 3564410 3564943 D identified by match to protein family HMM PF00583; acetyltransferase 3564410..3564943 Clostridium botulinum A3 str. Loch Maree 6151481 YP_001788599.1 CDS ldhA NC_010520.1 3565487 3566491 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase 3565487..3566491 Clostridium botulinum A3 str. Loch Maree 6153856 YP_001788600.1 CDS ldhA NC_010520.1 3566678 3567673 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-lactate dehydrogenase complement(3566678..3567673) Clostridium botulinum A3 str. Loch Maree 6154634 YP_001788601.1 CDS CLK_2701 NC_010520.1 3568755 3569933 R hypothetical protein complement(3568755..3569933) Clostridium botulinum A3 str. Loch Maree 6152217 YP_001788602.1 CDS CLK_2702 NC_010520.1 3570150 3571346 R identified by match to protein family HMM PF00037; match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha/FixB family protein complement(3570150..3571346) Clostridium botulinum A3 str. Loch Maree 6152996 YP_001788603.1 CDS CLK_2703 NC_010520.1 3571364 3572158 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta/FixA family protein complement(3571364..3572158) Clostridium botulinum A3 str. Loch Maree 6153304 YP_001788604.1 CDS CLK_2704 NC_010520.1 3572171 3573304 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(3572171..3573304) Clostridium botulinum A3 str. Loch Maree 6154202 YP_001788605.1 CDS fldC NC_010520.1 3573471 3574595 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase subunit C complement(3573471..3574595) Clostridium botulinum A3 str. Loch Maree 6151688 YP_001788606.1 CDS fldB NC_010520.1 3574597 3575820 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase subunit B complement(3574597..3575820) Clostridium botulinum A3 str. Loch Maree 6152596 YP_001788607.1 CDS fldI NC_010520.1 3575825 3576619 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; R-phenyllactate dehydratase activator complement(3575825..3576619) Clostridium botulinum A3 str. Loch Maree 6154289 YP_001788608.1 CDS fldA NC_010520.1 3576619 3577857 R identified by match to protein family HMM PF02515; E-cinnamoyl-CoA:R-phenyllactate CoA transferase complement(3576619..3577857) Clostridium botulinum A3 str. Loch Maree 6151386 YP_001788609.1 CDS CLK_2709 NC_010520.1 3577911 3579542 R identified by match to protein family HMM PF00501; AMP-binding protein complement(3577911..3579542) Clostridium botulinum A3 str. Loch Maree 6154487 YP_001788610.1 CDS brnQ NC_010520.1 3580008 3581198 R identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein complement(3580008..3581198) Clostridium botulinum A3 str. Loch Maree 6151615 YP_001788611.1 CDS guaA NC_010520.1 3581653 3583185 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3581653..3583185) Clostridium botulinum A3 str. Loch Maree 6153811 YP_001788612.1 CDS guaB NC_010520.1 3583198 3584652 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase complement(3583198..3584652) Clostridium botulinum A3 str. Loch Maree 6154566 YP_001788613.1 CDS CLK_2713 NC_010520.1 3585093 3585842 D identified by match to protein family HMM PF01171; PP-loop family protein 3585093..3585842 Clostridium botulinum A3 str. Loch Maree 6152157 YP_001788614.1 CDS groEL NC_010520.1 3585921 3587546 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL complement(3585921..3587546) Clostridium botulinum A3 str. Loch Maree 6152961 YP_001788615.1 CDS groES NC_010520.1 3587576 3587863 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(3587576..3587863) Clostridium botulinum A3 str. Loch Maree 6153328 YP_001788616.1 CDS CLK_2717 NC_010520.1 3588179 3588823 D identified by match to protein family HMM PF07314; match to protein family HMM TIGR01906; hypothetical protein 3588179..3588823 Clostridium botulinum A3 str. Loch Maree 6154184 YP_001788617.1 CDS CLK_2716 NC_010520.1 3588818 3589030 R integral membrane protein complement(3588818..3589030) Clostridium botulinum A3 str. Loch Maree 6151667 YP_001788618.1 CDS CLK_2718 NC_010520.1 3589336 3590829 R identified by match to protein family HMM PF00037; match to protein family HMM PF02906; [Fe] hydrogenase complement(3589336..3590829) Clostridium botulinum A3 str. Loch Maree 6154005 YP_001788619.1 CDS CLK_2719 NC_010520.1 3591002 3591919 R identified by match to protein family HMM PF00730; match to protein family HMM PF07934; 8-oxoguanine DNA glycosylase complement(3591002..3591919) Clostridium botulinum A3 str. Loch Maree 6151914 YP_001788620.1 CDS gltA NC_010520.1 3592070 3593455 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(3592070..3593455) Clostridium botulinum A3 str. Loch Maree 6152724 YP_001788621.1 CDS CLK_2721 NC_010520.1 3593455 3594345 R identified by match to protein family HMM PF00175; ferredoxin-NADP reductase complement(3593455..3594345) Clostridium botulinum A3 str. Loch Maree 6154020 YP_001788622.1 CDS CLK_2722 NC_010520.1 3594576 3595208 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(3594576..3595208) Clostridium botulinum A3 str. Loch Maree 6154844 YP_001788623.1 CDS CLK_2723 NC_010520.1 3595408 3597330 D identified by match to protein family HMM PF00005; drug resistance ABC transporter ATP-binding protein 3595408..3597330 Clostridium botulinum A3 str. Loch Maree 6153251 YP_001788624.1 CDS CLK_2724 NC_010520.1 3597670 3598434 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr family DNA-binding response regulator complement(3597670..3598434) Clostridium botulinum A3 str. Loch Maree 6154376 YP_001788625.1 CDS CLK_2725 NC_010520.1 3598435 3600069 R identified by match to protein family HMM PF02518; match to protein family HMM PF06580; match to protein family HMM PF07694; sensor histidine kinase complement(3598435..3600069) Clostridium botulinum A3 str. Loch Maree 6151933 YP_001788626.1 CDS cstA NC_010520.1 3600312 3601730 D identified by match to protein family HMM PF02554; carbon starvation protein CstA 3600312..3601730 Clostridium botulinum A3 str. Loch Maree 6152797 YP_001788627.1 CDS CLK_2727 NC_010520.1 3601781 3604708 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; match to protein family HMM PF08367; peptidase complement(3601781..3604708) Clostridium botulinum A3 str. Loch Maree 6154429 YP_001788628.1 CDS pyc NC_010520.1 3605089 3608523 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(3605089..3608523) Clostridium botulinum A3 str. Loch Maree 6152629 YP_001788629.1 CDS CLK_2729 NC_010520.1 3608983 3610005 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease complement(3608983..3610005) Clostridium botulinum A3 str. Loch Maree 6151589 YP_001788630.1 CDS CLK_2730 NC_010520.1 3610229 3610852 D identified by match to protein family HMM PF05866; endodeoxyribonuclease RusA 3610229..3610852 Clostridium botulinum A3 str. Loch Maree 6154781 YP_001788631.1 CDS CLK_2731 NC_010520.1 3611014 3612270 R identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase complement(3611014..3612270) Clostridium botulinum A3 str. Loch Maree 6153695 YP_001788632.1 CDS CLK_2733 NC_010520.1 3612639 3613025 R hypothetical protein complement(3612639..3613025) Clostridium botulinum A3 str. Loch Maree 6155042 YP_001788633.1 CDS CLK_2734 NC_010520.1 3613088 3613978 R hypothetical protein complement(3613088..3613978) Clostridium botulinum A3 str. Loch Maree 6152103 YP_001788634.1 CDS CLK_2735 NC_010520.1 3613994 3614902 R identified by match to protein family HMM PF01297; manganese/zinc/iron chelate ABC transporter substrate-binding protein complement(3613994..3614902) Clostridium botulinum A3 str. Loch Maree 6153448 YP_001788635.1 CDS CLK_2736 NC_010520.1 3615100 3616341 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 3615100..3616341 Clostridium botulinum A3 str. Loch Maree 6152401 YP_001788636.1 CDS CLK_2737 NC_010520.1 3616479 3616937 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 3616479..3616937 Clostridium botulinum A3 str. Loch Maree 6151779 YP_001788637.1 CDS CLK_2738 NC_010520.1 3616934 3617647 D identified by match to protein family HMM PF00814; glycoprotease 3616934..3617647 Clostridium botulinum A3 str. Loch Maree 6151800 YP_001788638.1 CDS rimI NC_010520.1 3617640 3618098 D identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 3617640..3618098 Clostridium botulinum A3 str. Loch Maree 6154553 YP_001788639.1 CDS tyrS NC_010520.1 3618199 3619422 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(3618199..3619422) Clostridium botulinum A3 str. Loch Maree 6152568 YP_001788640.1 CDS CLK_2741 NC_010520.1 3619655 3620062 R hypothetical protein complement(3619655..3620062) Clostridium botulinum A3 str. Loch Maree 6151530 YP_001788641.1 CDS CLK_2742 NC_010520.1 3620198 3621355 R identified by match to protein family HMM PF04326; ATP-binding protein complement(3620198..3621355) Clostridium botulinum A3 str. Loch Maree 6154222 YP_001788642.1 CDS CLK_2743 NC_010520.1 3621503 3622066 R hypothetical protein complement(3621503..3622066) Clostridium botulinum A3 str. Loch Maree 6153826 YP_001788643.1 CDS CLK_2744 NC_010520.1 3622147 3622308 R identified by Glimmer3; hypothetical protein complement(3622147..3622308) Clostridium botulinum A3 str. Loch Maree 6154882 YP_001788644.1 CDS CLK_2745 NC_010520.1 3622571 3623563 D identified by match to protein family HMM PF01569; PAP2 family protein 3622571..3623563 Clostridium botulinum A3 str. Loch Maree 6152139 YP_001788645.1 CDS prfC NC_010520.1 3623652 3625241 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 complement(3623652..3625241) Clostridium botulinum A3 str. Loch Maree 6151417 YP_001788646.1 CDS CLK_2747 NC_010520.1 3625746 3626552 D identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 3625746..3626552 Clostridium botulinum A3 str. Loch Maree 6153238 YP_001788647.1 CDS trpS NC_010520.1 3626812 3627810 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(3626812..3627810) Clostridium botulinum A3 str. Loch Maree 6151588 YP_001788648.1 CDS CLK_2749 NC_010520.1 3627989 3628126 R identified by Glimmer3; hypothetical protein complement(3627989..3628126) Clostridium botulinum A3 str. Loch Maree 6151990 YP_001788649.1 CDS CLK_2750 NC_010520.1 3628534 3628908 R identified by match to protein family HMM PF01880; match to protein family HMM PF06397; match to protein family HMM TIGR00319; match to protein family HMM TIGR00320; match to protein family HMM TIGR00332; desulfoferrodoxin complement(3628534..3628908) Clostridium botulinum A3 str. Loch Maree 6152619 YP_001788650.1 CDS CLK_2751 NC_010520.1 3629091 3629285 D hypothetical protein 3629091..3629285 Clostridium botulinum A3 str. Loch Maree 6154642 YP_001788651.1 CDS cgs NC_010520.1 3629498 3638146 R identified by match to protein family HMM PF06165; match to protein family HMM PF06204; match to protein family HMM PF06205; cyclic beta 1-2 glucan synthetase complement(3629498..3638146) Clostridium botulinum A3 str. Loch Maree 6151983 YP_001788652.1 CDS lysA NC_010520.1 3638411 3639679 R identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase complement(3638411..3639679) Clostridium botulinum A3 str. Loch Maree 6151522 YP_001788653.1 CDS lysC NC_010520.1 3639713 3640915 R identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; aspartokinase complement(3639713..3640915) Clostridium botulinum A3 str. Loch Maree 6154392 YP_001788654.1 CDS CLK_2755 NC_010520.1 3641311 3642609 R catalyzes the removal of amino acids from the N termini of peptides; aminopeptidase 2 complement(3641311..3642609) Clostridium botulinum A3 str. Loch Maree 6154565 YP_001788655.1 CDS CLK_2756 NC_010520.1 3642758 3643936 D identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 3642758..3643936 Clostridium botulinum A3 str. Loch Maree 6153871 YP_001788656.1 CDS CLK_2757 NC_010520.1 3644073 3645164 D hypothetical protein 3644073..3645164 Clostridium botulinum A3 str. Loch Maree 6151989 YP_001788657.1 CDS CLK_2758 NC_010520.1 3645429 3647558 R helicase complement(3645429..3647558) Clostridium botulinum A3 str. Loch Maree 6153008 YP_001788658.1 CDS ftsH NC_010520.1 3647579 3649555 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH complement(3647579..3649555) Clostridium botulinum A3 str. Loch Maree 6153447 YP_001788659.1 CDS CLK_2760 NC_010520.1 3650113 3651504 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(3650113..3651504) Clostridium botulinum A3 str. Loch Maree 6154542 YP_001788660.1 CDS proS NC_010520.1 3651706 3653142 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3651706..3653142) Clostridium botulinum A3 str. Loch Maree 6151406 YP_001788661.1 CDS CLK_2762 NC_010520.1 3653566 3653808 R identified by match to protein family HMM PF01541; GIY-YIG domain-containing protein complement(3653566..3653808) Clostridium botulinum A3 str. Loch Maree 6152429 YP_001788662.1 CDS CLK_2763 NC_010520.1 3654246 3655904 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; SulP family sulfate permease complement(3654246..3655904) Clostridium botulinum A3 str. Loch Maree 6153927 YP_001788663.1 CDS CLK_2764 NC_010520.1 3656118 3657503 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(3656118..3657503) Clostridium botulinum A3 str. Loch Maree 6154887 YP_001788664.1 CDS CLK_2765 NC_010520.1 3657487 3658179 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(3657487..3658179) Clostridium botulinum A3 str. Loch Maree 6152652 YP_001788665.1 CDS CLK_2766 NC_010520.1 3658349 3659557 R lipoprotein complement(3658349..3659557) Clostridium botulinum A3 str. Loch Maree 6152723 YP_001788666.1 CDS CLK_2767 NC_010520.1 3659562 3660467 R identified by match to protein family HMM PF00005; bacitracin ABC transporter ATP-binding protein complement(3659562..3660467) Clostridium botulinum A3 str. Loch Maree 6154921 YP_001788667.1 CDS CLK_2768 NC_010520.1 3660824 3661027 D hypothetical protein 3660824..3661027 Clostridium botulinum A3 str. Loch Maree 6154046 YP_001788668.1 CDS CLK_2769 NC_010520.1 3661154 3662149 R hypothetical protein complement(3661154..3662149) Clostridium botulinum A3 str. Loch Maree 6153980 YP_001788669.1 CDS CLK_2770 NC_010520.1 3662498 3663583 R identified by match to protein family HMM PF05913; hypothetical protein complement(3662498..3663583) Clostridium botulinum A3 str. Loch Maree 6153138 YP_001788670.1 CDS CLK_2771 NC_010520.1 3663891 3664784 R identified by match to protein family HMM PF01869; BadF/BadG/BcrA/BcrD ATPase complement(3663891..3664784) Clostridium botulinum A3 str. Loch Maree 6152303 YP_001788671.1 CDS CLK_2772 NC_010520.1 3664844 3665140 R identified by match to protein family HMM PF02255; PTS system lactose/cellobiose-specific family IIA subunit complement(3664844..3665140) Clostridium botulinum A3 str. Loch Maree 6151553 YP_001788672.1 CDS CLK_2773 NC_010520.1 3665382 3665690 R identified by match to protein family HMM PF02302; PTS system lactose/cellobiose-specific family IIB subunit complement(3665382..3665690) Clostridium botulinum A3 str. Loch Maree 6153520 YP_001788673.1 CDS CLK_2774 NC_010520.1 3665810 3668539 R identified by match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF03610; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator complement(3665810..3668539) Clostridium botulinum A3 str. Loch Maree 6152285 YP_001788674.1 CDS CLK_2775 NC_010520.1 3668663 3669955 R identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system lactose/cellobiose family transporter subunit IIC complement(3668663..3669955) Clostridium botulinum A3 str. Loch Maree 6151998 YP_001788675.1 CDS CLK_2776 NC_010520.1 3670036 3671373 R identified by match to protein family HMM PF02056; glycosyl hydrolase complement(3670036..3671373) Clostridium botulinum A3 str. Loch Maree 6154352 YP_001788676.1 CDS CLK_2777 NC_010520.1 3671729 3673042 R identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase complement(3671729..3673042) Clostridium botulinum A3 str. Loch Maree 6153034 YP_001788677.1 CDS CLK_2778 NC_010520.1 3673468 3674067 D identified by match to protein family HMM PF00589; phage integrase site specific recombinase 3673468..3674067 Clostridium botulinum A3 str. Loch Maree 6152630 YP_001788678.1 CDS speD NC_010520.1 3674379 3674729 R identified by match to protein family HMM PF02675; match to protein family HMM TIGR03330; S-adenosylmethionine decarboxylase complement(3674379..3674729) Clostridium botulinum A3 str. Loch Maree 6154745 YP_001788679.1 CDS CLK_2780 NC_010520.1 3674883 3676079 R hypothetical protein complement(3674883..3676079) Clostridium botulinum A3 str. Loch Maree 6153739 YP_001788680.1 CDS CLK_2781 NC_010520.1 3676601 3676876 R hypothetical protein complement(3676601..3676876) Clostridium botulinum A3 str. Loch Maree 6153063 YP_001788681.1 CDS CLK_2782 NC_010520.1 3677604 3677744 R identified by Glimmer3; hypothetical protein complement(3677604..3677744) Clostridium botulinum A3 str. Loch Maree 6152200 YP_001788682.1 CDS CLK_2783 NC_010520.1 3677817 3678353 D flavoredoxin 3677817..3678353 Clostridium botulinum A3 str. Loch Maree 6154744 YP_001788683.1 CDS CLK_2785 NC_010520.1 3679730 3679891 D identified by Glimmer3; hypothetical protein 3679730..3679891 Clostridium botulinum A3 str. Loch Maree 6153699 YP_001788684.1 CDS CLK_2787 NC_010520.1 3680781 3681227 R identified by match to protein family HMM PF00583; acetyltransferase complement(3680781..3681227) Clostridium botulinum A3 str. Loch Maree 6153080 YP_001788685.1 CDS CLK_2788 NC_010520.1 3681527 3681682 R identified by Glimmer3; hypothetical protein complement(3681527..3681682) Clostridium botulinum A3 str. Loch Maree 6153089 YP_001788686.1 CDS CLK_2789 NC_010520.1 3682101 3682805 R hypothetical protein complement(3682101..3682805) Clostridium botulinum A3 str. Loch Maree 6152030 YP_001788687.1 CDS CLK_2790 NC_010520.1 3682852 3683637 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(3682852..3683637) Clostridium botulinum A3 str. Loch Maree 6154430 YP_001788688.1 CDS CLK_2791 NC_010520.1 3683616 3683765 R identified by Glimmer3; hypothetical protein complement(3683616..3683765) Clostridium botulinum A3 str. Loch Maree 6152255 YP_001788689.1 CDS CLK_2792 NC_010520.1 3683958 3684233 R UbiE/COQ5 family methlytransferase complement(3683958..3684233) Clostridium botulinum A3 str. Loch Maree 6151461 YP_001788690.1 CDS CLK_2793 NC_010520.1 3684353 3684757 R identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase complement(3684353..3684757) Clostridium botulinum A3 str. Loch Maree 6152547 YP_001788691.1 CDS CLK_2794 NC_010520.1 3684907 3685845 R identified by match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase complement(3684907..3685845) Clostridium botulinum A3 str. Loch Maree 6151628 YP_001788692.1 CDS CLK_2795 NC_010520.1 3686381 3686902 R identified by match to protein family HMM PF01872; riboflavin biosynthesis protein RibD domain-containing protein complement(3686381..3686902) Clostridium botulinum A3 str. Loch Maree 6154639 YP_001788693.1 CDS uvrA NC_010520.1 3686899 3689391 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A complement(3686899..3689391) Clostridium botulinum A3 str. Loch Maree 6153832 YP_001788694.1 CDS CLK_2797 NC_010520.1 3689395 3689814 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(3689395..3689814) Clostridium botulinum A3 str. Loch Maree 6152977 YP_001788695.1 CDS CLK_2798 NC_010520.1 3690180 3691124 R identified by match to protein family HMM PF04657; hypothetical protein complement(3690180..3691124) Clostridium botulinum A3 str. Loch Maree 6154384 YP_001788696.1 CDS CLK_2799 NC_010520.1 3691328 3691729 R identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; transcriptional regulator complement(3691328..3691729) Clostridium botulinum A3 str. Loch Maree 6154611 YP_001788697.1 CDS CLK_2800 NC_010520.1 3691949 3692356 R identified by match to protein family HMM PF00583; acetyltransferase complement(3691949..3692356) Clostridium botulinum A3 str. Loch Maree 6152592 YP_001788698.1 CDS rumA NC_010520.1 3692782 3694167 R identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF03602; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(3692782..3694167) Clostridium botulinum A3 str. Loch Maree 6151447 YP_001788699.1 CDS CLK_2802 NC_010520.1 3694400 3694753 R hypothetical protein complement(3694400..3694753) Clostridium botulinum A3 str. Loch Maree 6154133 YP_001788700.1 CDS CLK_2803 NC_010520.1 3695081 3696091 R identified by match to protein family HMM PF00037; match to protein family HMM PF00248; aldo/keto reductase complement(3695081..3696091) Clostridium botulinum A3 str. Loch Maree 6154032 YP_001788701.1 CDS pykA NC_010520.1 3696234 3697991 R identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase complement(3696234..3697991) Clostridium botulinum A3 str. Loch Maree 6152866 YP_001788702.1 CDS pfkA NC_010520.1 3698025 3698984 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(3698025..3698984) Clostridium botulinum A3 str. Loch Maree 6151854 YP_001788703.1 CDS dnaE NC_010520.1 3699227 3702784 R catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria.; DNA polymerase III DnaE complement(3699227..3702784) Clostridium botulinum A3 str. Loch Maree 6152874 YP_001788704.1 CDS CLK_2807 NC_010520.1 3702947 3703894 R identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein complement(3702947..3703894) Clostridium botulinum A3 str. Loch Maree 6151827 YP_001788705.1 CDS CLK_2808 NC_010520.1 3703901 3705238 R identified by match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein complement(3703901..3705238) Clostridium botulinum A3 str. Loch Maree 6152528 YP_001788706.1 CDS CLK_2809 NC_010520.1 3705235 3706119 R identified by match to protein family HMM PF03668; hypothetical protein complement(3705235..3706119) Clostridium botulinum A3 str. Loch Maree 6153272 YP_001788707.1 CDS murB NC_010520.1 3706239 3707159 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(3706239..3707159) Clostridium botulinum A3 str. Loch Maree 6151922 YP_001788708.1 CDS CLK_2811 NC_010520.1 3707228 3707959 R identified by match to protein family HMM PF02811; hydrolase complement(3707228..3707959) Clostridium botulinum A3 str. Loch Maree 6152943 YP_001788709.1 CDS uvrC NC_010520.1 3708019 3709875 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(3708019..3709875) Clostridium botulinum A3 str. Loch Maree 6153492 YP_001788710.1 CDS CLK_2813 NC_010520.1 3709889 3710497 R identified by match to protein family HMM PF04307; metal-dependent hydrolase, membrane-bound complement(3709889..3710497) Clostridium botulinum A3 str. Loch Maree 6154558 YP_001788711.1 CDS CLK_2814 NC_010520.1 3710684 3711580 R identified by match to protein family HMM PF01336; match to protein family HMM PF01966; HD domain-containing protein complement(3710684..3711580) Clostridium botulinum A3 str. Loch Maree 6153457 YP_001788712.1 CDS CLK_2815 NC_010520.1 3711608 3713035 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(3711608..3713035) Clostridium botulinum A3 str. Loch Maree 6154510 YP_001788713.1 CDS CLK_2816 NC_010520.1 3713040 3714245 R identified by match to protein family HMM PF01098; cell cycle protein FtsW complement(3713040..3714245) Clostridium botulinum A3 str. Loch Maree 6151337 YP_001788714.1 CDS CLK_2817 NC_010520.1 3714280 3714717 R identified by match to protein family HMM PF00498; FHA domain-containing protein complement(3714280..3714717) Clostridium botulinum A3 str. Loch Maree 6152340 YP_001788715.1 CDS uvrA NC_010520.1 3714816 3717638 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(3714816..3717638) Clostridium botulinum A3 str. Loch Maree 6152028 YP_001788716.1 CDS uvrB NC_010520.1 3717657 3719645 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(3717657..3719645) Clostridium botulinum A3 str. Loch Maree 6152379 YP_001788717.1 CDS CLK_2820 NC_010520.1 3719647 3720942 R hypothetical protein complement(3719647..3720942) Clostridium botulinum A3 str. Loch Maree 6153625 YP_001788718.1 CDS CLK_2821 NC_010520.1 3721031 3722236 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease complement(3721031..3722236) Clostridium botulinum A3 str. Loch Maree 6154383 YP_001788719.1 CDS CLK_2822 NC_010520.1 3722446 3723336 R identified by match to protein family HMM PF02687; cell division protein FtsX complement(3722446..3723336) Clostridium botulinum A3 str. Loch Maree 6152572 YP_001788720.1 CDS CLK_2823 NC_010520.1 3723326 3724012 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE complement(3723326..3724012) Clostridium botulinum A3 str. Loch Maree 6152876 YP_001788721.1 CDS CLK_2824 NC_010520.1 3724168 3725070 R identified by match to protein family HMM PF02588; hypothetical protein complement(3724168..3725070) Clostridium botulinum A3 str. Loch Maree 6153723 YP_001788722.1 CDS CLK_2825 NC_010520.1 3725163 3725372 R identified by Glimmer3; hypothetical protein complement(3725163..3725372) Clostridium botulinum A3 str. Loch Maree 6154920 YP_001788723.1 CDS CLK_2826 NC_010520.1 3725586 3726527 R identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal subunit complement(3725586..3726527) Clostridium botulinum A3 str. Loch Maree 6154592 YP_001788724.1 CDS CLK_2827 NC_010520.1 3726527 3727351 R identified by match to protein family HMM PF00456; transketolase complement(3726527..3727351) Clostridium botulinum A3 str. Loch Maree 6152240 YP_001788725.1 CDS CLK_2828 NC_010520.1 3727614 3727967 R identified by match to protein family HMM PF02452; PemK family protein complement(3727614..3727967) Clostridium botulinum A3 str. Loch Maree 6152107 YP_001788726.1 CDS CLK_2829 NC_010520.1 3727924 3728247 R hypothetical protein complement(3727924..3728247) Clostridium botulinum A3 str. Loch Maree 6154143 YP_001788727.1 CDS alr NC_010520.1 3728386 3729546 R converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase complement(3728386..3729546) Clostridium botulinum A3 str. Loch Maree 6152080 YP_001788728.1 CDS CLK_2831 NC_010520.1 3729574 3730188 R hypothetical protein complement(3729574..3730188) Clostridium botulinum A3 str. Loch Maree 6152502 YP_001788729.1 CDS CLK_2832 NC_010520.1 3730388 3731890 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase complement(3730388..3731890) Clostridium botulinum A3 str. Loch Maree 6153233 YP_001788730.1 CDS acpS NC_010520.1 3731887 3732267 R identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-(acyl-carrier-protein) synthase complement(3731887..3732267) Clostridium botulinum A3 str. Loch Maree 6151884 YP_001788731.1 CDS CLK_2834 NC_010520.1 3732382 3732744 R hypothetical protein complement(3732382..3732744) Clostridium botulinum A3 str. Loch Maree 6152864 YP_001788732.1 CDS CLK_2835 NC_010520.1 3733140 3734465 R identified by match to protein family HMM PF03553; Na+/H+ antiporter family protein complement(3733140..3734465) Clostridium botulinum A3 str. Loch Maree 6153888 YP_001788733.1 CDS CLK_2836 NC_010520.1 3734769 3735626 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; hypothetical protein complement(3734769..3735626) Clostridium botulinum A3 str. Loch Maree 6154960 YP_001788734.1 CDS CLK_2837 NC_010520.1 3735787 3736446 R hypothetical protein complement(3735787..3736446) Clostridium botulinum A3 str. Loch Maree 6153908 YP_001788735.1 CDS rpsD NC_010520.1 3736555 3737148 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3736555..3737148) Clostridium botulinum A3 str. Loch Maree 6153591 YP_001788736.1 CDS CLK_2839 NC_010520.1 3737574 3738746 D identified by match to protein family HMM PF00375; sodium:dicarboxylate symporter family protein 3737574..3738746 Clostridium botulinum A3 str. Loch Maree 6154391 YP_001788737.1 CDS CLK_2840 NC_010520.1 3738934 3739527 R identified by match to protein family HMM PF01569; PAP2 family protein complement(3738934..3739527) Clostridium botulinum A3 str. Loch Maree 6151542 YP_001788738.1 CDS CLK_2841 NC_010520.1 3739610 3740260 R identified by match to protein family HMM PF09335; DedA family membrane protein complement(3739610..3740260) Clostridium botulinum A3 str. Loch Maree 6154522 YP_001788739.1 CDS CLK_2842 NC_010520.1 3740553 3741947 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensory transduction histidine kinase complement(3740553..3741947) Clostridium botulinum A3 str. Loch Maree 6151429 YP_001788740.1 CDS CLK_2843 NC_010520.1 3741928 3742608 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; alkaline phosphatase synthesis transcriptional regulatory protein PhoP complement(3741928..3742608) Clostridium botulinum A3 str. Loch Maree 6152441 YP_001788741.1 CDS CLK_2844 NC_010520.1 3742957 3743439 D hypothetical protein 3742957..3743439 Clostridium botulinum A3 str. Loch Maree 6154914 YP_001788742.1 CDS CLK_2845 NC_010520.1 3743770 3744564 R identified by match to protein family HMM PF00376; match to protein family HMM PF06445; MerR family transcriptional regulator complement(3743770..3744564) Clostridium botulinum A3 str. Loch Maree 6152214 YP_001788743.1 CDS CLK_2846 NC_010520.1 3744573 3745412 R identified by match to protein family HMM PF02633; creatinine amidohydrolase complement(3744573..3745412) Clostridium botulinum A3 str. Loch Maree 6152829 YP_001788744.1 CDS CLK_2847 NC_010520.1 3745871 3746650 R hypothetical protein complement(3745871..3746650) Clostridium botulinum A3 str. Loch Maree 6153438 YP_001788745.1 CDS CLK_2848 NC_010520.1 3746640 3747734 R identified by match to protein family HMM PF03235; hypothetical protein complement(3746640..3747734) Clostridium botulinum A3 str. Loch Maree 6154895 YP_001788746.1 CDS CLK_2849 NC_010520.1 3748291 3749709 R identified by match to protein family HMM PF02384; site-specific DNA-methyltransferase restriction-modification protein complement(3748291..3749709) Clostridium botulinum A3 str. Loch Maree 6151997 YP_001788747.1 CDS CLK_2850 NC_010520.1 3749990 3750136 R identified by Glimmer3; hypothetical protein complement(3749990..3750136) Clostridium botulinum A3 str. Loch Maree 6154823 YP_001788748.1 CDS CLK_2851 NC_010520.1 3750631 3750789 R identified by Glimmer3; hypothetical protein complement(3750631..3750789) Clostridium botulinum A3 str. Loch Maree 6153986 YP_001788749.1 CDS CLK_2852 NC_010520.1 3750987 3751124 R transposon Tn7 transposition protein TnsA complement(3750987..3751124) Clostridium botulinum A3 str. Loch Maree 6152250 YP_001788750.1 CDS glmS NC_010520.1 3751384 3753210 R identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glutamine-fructose-6-phosphate transaminase (isomerizing) complement(3751384..3753210) Clostridium botulinum A3 str. Loch Maree 6151480 YP_001788751.1 CDS CLK_2854 NC_010520.1 3753875 3754552 R identified by match to protein family HMM PF00923; transaldolase complement(3753875..3754552) Clostridium botulinum A3 str. Loch Maree 6154537 YP_001788752.1 CDS CLK_2855 NC_010520.1 3754571 3755218 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase complement(3754571..3755218) Clostridium botulinum A3 str. Loch Maree 6154590 YP_001788753.1 CDS srlD NC_010520.1 3755242 3756027 R catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase complement(3755242..3756027) Clostridium botulinum A3 str. Loch Maree 6153763 YP_001788754.1 CDS CLK_2857 NC_010520.1 3756047 3756412 R identified by match to protein family HMM PF03829; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(3756047..3756412) Clostridium botulinum A3 str. Loch Maree 6154594 YP_001788755.1 CDS CLK_2858 NC_010520.1 3756578 3757582 R identified by match to protein family HMM PF03612; match to protein family HMM PF07663; match to protein family HMM TIGR00825; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(3756578..3757582) Clostridium botulinum A3 str. Loch Maree 6154395 YP_001788756.1 CDS CLK_2859 NC_010520.1 3757595 3758140 R identified by match to protein family HMM PF03608; match to protein family HMM TIGR00821; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(3757595..3758140) Clostridium botulinum A3 str. Loch Maree 6153887 YP_001788757.1 CDS gutM NC_010520.1 3758185 3758580 R identified by match to protein family HMM PF06923; glucitol operon activator protein complement(3758185..3758580) Clostridium botulinum A3 str. Loch Maree 6152362 YP_001788758.1 CDS CLK_2861 NC_010520.1 3758594 3759643 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; L-iditol 2-dehydrogenase complement(3758594..3759643) Clostridium botulinum A3 str. Loch Maree 6151839 YP_001788759.1 CDS CLK_2862 NC_010520.1 3759678 3760649 R identified by match to protein family HMM PF04198; glucitol operon regulator complement(3759678..3760649) Clostridium botulinum A3 str. Loch Maree 6154972 YP_001788760.1 CDS glmM NC_010520.1 3761005 3762354 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3761005..3762354) Clostridium botulinum A3 str. Loch Maree 6152604 YP_001788761.1 CDS CLK_2864 NC_010520.1 3762489 3763019 R identified by match to protein family HMM PF01558; 2-oxoacid:acceptor oxidoreductase subunit gamma complement(3762489..3763019) Clostridium botulinum A3 str. Loch Maree 6152907 YP_001788762.1 CDS CLK_2865 NC_010520.1 3763021 3763770 R identified by match to protein family HMM PF02775; 2-oxoacid:acceptor oxidoreductase, beta subunit complement(3763021..3763770) Clostridium botulinum A3 str. Loch Maree 6154404 YP_001788763.1 CDS CLK_2866 NC_010520.1 3763770 3764840 R catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase complement(3763770..3764840) Clostridium botulinum A3 str. Loch Maree 6153209 YP_001788764.1 CDS CLK_2867 NC_010520.1 3764856 3765065 R identified by match to protein family HMM PF00037; 2-oxoacid:acceptor oxidoreductase subunit delta complement(3764856..3765065) Clostridium botulinum A3 str. Loch Maree 6152730 YP_001788765.1 CDS CLK_2868 NC_010520.1 3765167 3765829 R hypothetical protein complement(3765167..3765829) Clostridium botulinum A3 str. Loch Maree 6152075 YP_001788766.1 CDS buk NC_010520.1 3766092 3767162 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3766092..3767162) Clostridium botulinum A3 str. Loch Maree 6154119 YP_001788767.1 CDS ptb NC_010520.1 3767191 3768102 R catalyzes the synthesis of butanoylphosphate from butanoyl-CoA and inorganic phosphate; phosphate butyryltransferase complement(3767191..3768102) Clostridium botulinum A3 str. Loch Maree 6153105 YP_001788768.1 CDS buk NC_010520.1 3768095 3769189 R catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase complement(3768095..3769189) Clostridium botulinum A3 str. Loch Maree 6152481 YP_001788769.1 CDS CLK_2872 NC_010520.1 3769290 3770888 R oxidoreductase, FAD-binding complement(3769290..3770888) Clostridium botulinum A3 str. Loch Maree 6151473 YP_001788770.1 CDS CLK_2873 NC_010520.1 3770890 3772170 R identified by match to protein family HMM PF07949; hypothetical protein complement(3770890..3772170) Clostridium botulinum A3 str. Loch Maree 6154006 YP_001788771.1 CDS CLK_2874 NC_010520.1 3772140 3772988 R identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein complement(3772140..3772988) Clostridium botulinum A3 str. Loch Maree 6152959 YP_001788772.1 CDS CLK_2875 NC_010520.1 3773243 3773776 D identified by match to protein family HMM PF07486; cell wall hydrolase 3773243..3773776 Clostridium botulinum A3 str. Loch Maree 6151666 YP_001788773.1 CDS CLK_2876 NC_010520.1 3774169 3775032 R identified by match to protein family HMM PF01134; match to protein family HMM PF07992; pyridine nucleotide-disulfide family oxidoreductase complement(3774169..3775032) Clostridium botulinum A3 str. Loch Maree 6154791 YP_001788774.1 CDS trx NC_010520.1 3775098 3775415 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(3775098..3775415) Clostridium botulinum A3 str. Loch Maree 6153195 YP_001788775.1 CDS iadA NC_010520.1 3775524 3776699 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR01975; isoaspartyl dipeptidase complement(3775524..3776699) Clostridium botulinum A3 str. Loch Maree 6152384 YP_001788776.1 CDS CLK_2879 NC_010520.1 3776774 3778027 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3776774..3778027) Clostridium botulinum A3 str. Loch Maree 6152958 YP_001788777.1 CDS CLK_2880 NC_010520.1 3778055 3778795 R lipoprotein complement(3778055..3778795) Clostridium botulinum A3 str. Loch Maree 6154031 YP_001788778.1 CDS ptsI NC_010520.1 3778900 3780519 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(3778900..3780519) Clostridium botulinum A3 str. Loch Maree 6152074 YP_001788779.1 CDS CLK_2882 NC_010520.1 3780837 3782846 D identified by match to protein family HMM PF00158; match to protein family HMM PF00989; match to protein family HMM PF02954; match to protein family HMM TIGR00229; sensory box sigma-54 dependent transcriptional regulator 3780837..3782846 Clostridium botulinum A3 str. Loch Maree 6153108 YP_001788780.1 CDS CLK_2883 NC_010520.1 3782983 3783690 R identified by match to protein family HMM PF00515; hypothetical protein complement(3782983..3783690) Clostridium botulinum A3 str. Loch Maree 6153284 YP_001788781.1 CDS CLK_2884 NC_010520.1 3783760 3784323 R identified by match to protein family HMM PF05683; match to protein family HMM TIGR00723; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta complement(3783760..3784323) Clostridium botulinum A3 str. Loch Maree 6154266 YP_001788782.1 CDS CLK_2885 NC_010520.1 3784415 3785257 R Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase complement(3784415..3785257) Clostridium botulinum A3 str. Loch Maree 6152694 YP_001788783.1 CDS CLK_2886 NC_010520.1 3785398 3786102 R identified by match to protein family HMM PF01520; match to protein family HMM TIGR02883; N-acetylmuramoyl-L-alanine amidase complement(3785398..3786102) Clostridium botulinum A3 str. Loch Maree 6153242 YP_001788784.1 CDS CLK_2887 NC_010520.1 3786362 3787978 R identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704; Na/Pi-cotransporter family protein/PhoU family protein complement(3786362..3787978) Clostridium botulinum A3 str. Loch Maree 6153671 YP_001788785.1 CDS rpsI NC_010520.1 3788284 3788676 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3788284..3788676) Clostridium botulinum A3 str. Loch Maree 6154209 YP_001788786.1 CDS rplM NC_010520.1 3788702 3789136 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3788702..3789136) Clostridium botulinum A3 str. Loch Maree 6152274 YP_001788787.1 CDS truA NC_010520.1 3789260 3790000 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(3789260..3790000) Clostridium botulinum A3 str. Loch Maree 6152178 YP_001788788.1 CDS CLK_2891 NC_010520.1 3790000 3790803 R identified by match to protein family HMM PF02361; cobalt ABC transporter permease complement(3790000..3790803) Clostridium botulinum A3 str. Loch Maree 6154681 YP_001788789.1 CDS cbiO NC_010520.1 3790800 3791666 R with CbiNQ forms the ABC transporter for cobalt import; Clostridia have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3790800..3791666) Clostridium botulinum A3 str. Loch Maree 6153874 YP_001788790.1 CDS CLK_2893 NC_010520.1 3791651 3792499 R with CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(3791651..3792499) Clostridium botulinum A3 str. Loch Maree 6151948 YP_001788791.1 CDS rplQ NC_010520.1 3792590 3792931 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3792590..3792931) Clostridium botulinum A3 str. Loch Maree 6151632 YP_001788792.1 CDS rpoA NC_010520.1 3792975 3793922 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3792975..3793922) Clostridium botulinum A3 str. Loch Maree 6154512 YP_001788793.1 CDS rpsD NC_010520.1 3793990 3794610 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3793990..3794610) Clostridium botulinum A3 str. Loch Maree 6153331 YP_001788794.1 CDS rpsK NC_010520.1 3794645 3795043 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3794645..3795043) Clostridium botulinum A3 str. Loch Maree 6151486 YP_001788795.1 CDS rpsM NC_010520.1 3795061 3795432 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3795061..3795432) Clostridium botulinum A3 str. Loch Maree 6153005 YP_001788796.1 CDS rpmJ NC_010520.1 3795545 3795658 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3795545..3795658) Clostridium botulinum A3 str. Loch Maree 6154062 YP_001788797.1 CDS infA NC_010520.1 3795675 3795893 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(3795675..3795893) Clostridium botulinum A3 str. Loch Maree 6152131 YP_001788798.1 CDS CLK_2901 NC_010520.1 3795901 3796182 R hypothetical protein complement(3795901..3796182) Clostridium botulinum A3 str. Loch Maree 6152717 YP_001788799.1 CDS map NC_010520.1 3796197 3796946 R identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase complement(3796197..3796946) Clostridium botulinum A3 str. Loch Maree 6153752 YP_001788800.1 CDS adk NC_010520.1 3796946 3797596 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(3796946..3797596) Clostridium botulinum A3 str. Loch Maree 6153416 YP_001788801.1 CDS secY NC_010520.1 3797620 3798897 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3797620..3798897) Clostridium botulinum A3 str. Loch Maree 6151646 YP_001788802.1 CDS rplO NC_010520.1 3798898 3799338 R late assembly protein; 50S ribosomal protein L15 complement(3798898..3799338) Clostridium botulinum A3 str. Loch Maree 6152674 YP_001788803.1 CDS rpmD NC_010520.1 3799358 3799537 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3799358..3799537) Clostridium botulinum A3 str. Loch Maree 6153216 YP_001788804.1 CDS rpsE NC_010520.1 3799551 3800048 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3799551..3800048) Clostridium botulinum A3 str. Loch Maree 6154259 YP_001788805.1 CDS rplR NC_010520.1 3800066 3800425 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3800066..3800425) Clostridium botulinum A3 str. Loch Maree 6152440 YP_001788806.1 CDS rplF NC_010520.1 3800444 3800986 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3800444..3800986) Clostridium botulinum A3 str. Loch Maree 6151423 YP_001788807.1 CDS rpsH NC_010520.1 3801010 3801408 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3801010..3801408) Clostridium botulinum A3 str. Loch Maree 6153685 YP_001788808.1 CDS rpsN NC_010520.1 3801438 3801623 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(3801438..3801623) Clostridium botulinum A3 str. Loch Maree 6153566 YP_001788809.1 CDS rplE NC_010520.1 3801640 3802182 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3801640..3802182) Clostridium botulinum A3 str. Loch Maree 6152108 YP_001788810.1 CDS rplX NC_010520.1 3802205 3802522 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3802205..3802522) Clostridium botulinum A3 str. Loch Maree 6154769 YP_001788811.1 CDS rplN NC_010520.1 3802546 3802914 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3802546..3802914) Clostridium botulinum A3 str. Loch Maree 6153208 YP_001788812.1 CDS rpsQ NC_010520.1 3802949 3803203 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3802949..3803203) Clostridium botulinum A3 str. Loch Maree 6153095 YP_001788813.1 CDS rpmC NC_010520.1 3803225 3803437 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3803225..3803437) Clostridium botulinum A3 str. Loch Maree 6151788 YP_001788814.1 CDS rplP NC_010520.1 3803427 3803870 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3803427..3803870) Clostridium botulinum A3 str. Loch Maree 6153717 YP_001788815.1 CDS rpsC NC_010520.1 3803888 3804559 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3803888..3804559) Clostridium botulinum A3 str. Loch Maree 6154751 YP_001788816.1 CDS rplV NC_010520.1 3804577 3804912 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3804577..3804912) Clostridium botulinum A3 str. Loch Maree 6154040 YP_001788817.1 CDS rpsS NC_010520.1 3804934 3805218 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3804934..3805218) Clostridium botulinum A3 str. Loch Maree 6153148 YP_001788818.1 CDS rplB NC_010520.1 3805288 3806121 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3805288..3806121) Clostridium botulinum A3 str. Loch Maree 6152109 YP_001788819.1 CDS rplW NC_010520.1 3806176 3806469 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3806176..3806469) Clostridium botulinum A3 str. Loch Maree 6154118 YP_001788820.1 CDS rplD NC_010520.1 3806469 3807089 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3806469..3807089) Clostridium botulinum A3 str. Loch Maree 6153554 YP_001788821.1 CDS rplC NC_010520.1 3807114 3807743 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3807114..3807743) Clostridium botulinum A3 str. Loch Maree 6152560 YP_001788822.1 CDS rpsJ NC_010520.1 3807833 3808141 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3807833..3808141) Clostridium botulinum A3 str. Loch Maree 6151760 YP_001788823.1 CDS tuf NC_010520.1 3808538 3809731 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3808538..3809731) Clostridium botulinum A3 str. Loch Maree 6153728 YP_001788824.1 CDS fusA NC_010520.1 3809771 3811840 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3809771..3811840) Clostridium botulinum A3 str. Loch Maree 6152901 YP_001788825.1 CDS rpsG NC_010520.1 3811912 3812382 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3811912..3812382) Clostridium botulinum A3 str. Loch Maree 6154969 YP_001788826.1 CDS rpsL NC_010520.1 3812543 3812920 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3812543..3812920) Clostridium botulinum A3 str. Loch Maree 6154604 YP_001788827.1 CDS CLK_2930 NC_010520.1 3812996 3813238 R identified by match to protein family HMM PF01248; ribosomal protein L7Ae family protein complement(3812996..3813238) Clostridium botulinum A3 str. Loch Maree 6154457 YP_001788828.1 CDS rpoC NC_010520.1 3813360 3816896 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3813360..3816896) Clostridium botulinum A3 str. Loch Maree 6153415 YP_001788829.1 CDS rpoB NC_010520.1 3816917 3820636 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3816917..3820636) Clostridium botulinum A3 str. Loch Maree 6152418 YP_001788830.1 CDS rplL NC_010520.1 3820911 3821279 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3820911..3821279) Clostridium botulinum A3 str. Loch Maree 6154244 YP_001788831.1 CDS rplJ NC_010520.1 3821326 3821826 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3821326..3821826) Clostridium botulinum A3 str. Loch Maree 6154068 YP_001788832.1 CDS rplA NC_010520.1 3822028 3822717 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3822028..3822717) Clostridium botulinum A3 str. Loch Maree 6153016 YP_001788833.1 CDS rplK NC_010520.1 3822774 3823199 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3822774..3823199) Clostridium botulinum A3 str. Loch Maree 6152007 YP_001788834.1 CDS nusG NC_010520.1 3823270 3823794 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3823270..3823794) Clostridium botulinum A3 str. Loch Maree 6151858 YP_001788835.1 CDS secE NC_010520.1 3823841 3824068 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3823841..3824068) Clostridium botulinum A3 str. Loch Maree 6154694 YP_001788836.1 CDS rpmG NC_010520.1 3824118 3824267 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 complement(3824118..3824267) Clostridium botulinum A3 str. Loch Maree 6153135 YP_001788837.1 CDS tuf NC_010520.1 3824469 3825662 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3824469..3825662) Clostridium botulinum A3 str. Loch Maree 6153686 YP_001788838.1 CDS sigH NC_010520.1 3825978 3826619 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(3825978..3826619) Clostridium botulinum A3 str. Loch Maree 6155074 YP_001788839.1 CDS CLK_2944 NC_010520.1 3826693 3827202 R identified by match to protein family HMM PF05991; hypothetical protein complement(3826693..3827202) Clostridium botulinum A3 str. Loch Maree 6152058 YP_001788840.1 CDS CLK_2945 NC_010520.1 3827205 3827978 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase complement(3827205..3827978) Clostridium botulinum A3 str. Loch Maree 6151538 YP_001788841.1 CDS thyX NC_010520.1 3827981 3828733 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(3827981..3828733) Clostridium botulinum A3 str. Loch Maree 6152351 YP_001788842.1 CDS CLK_2947 NC_010520.1 3828723 3829163 R identified by match to protein family HMM PF00636; RNase3 domain-containing protein complement(3828723..3829163) Clostridium botulinum A3 str. Loch Maree 6153475 YP_001788843.1 CDS cysS NC_010520.1 3829212 3830609 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(3829212..3830609) Clostridium botulinum A3 str. Loch Maree 6154498 YP_001788844.1 CDS ilvA NC_010520.1 3830638 3831855 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR01127; threonine dehydratase complement(3830638..3831855) Clostridium botulinum A3 str. Loch Maree 6153895 YP_001788845.1 CDS CLK_2950 NC_010520.1 3831927 3833564 R identified by match to protein family HMM PF03129; match to protein family HMM PF04073; prolyl-tRNA synthetase complement(3831927..3833564) Clostridium botulinum A3 str. Loch Maree 6154036 YP_001788846.1 CDS ispD NC_010520.1 3833675 3834364 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3833675..3834364) Clostridium botulinum A3 str. Loch Maree 6153076 YP_001788847.1 CDS CLK_2952 NC_010520.1 3834366 3835463 R identified by match to protein family HMM PF01850; match to protein family HMM PF01938; PIN/TRAM domain-containing protein complement(3834366..3835463) Clostridium botulinum A3 str. Loch Maree 6153691 YP_001788848.1 CDS CLK_2953 NC_010520.1 3835868 3836266 D hypothetical protein 3835868..3836266 Clostridium botulinum A3 str. Loch Maree 6154230 YP_001788849.1 CDS CLK_2954 NC_010520.1 3836298 3837359 R non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair; DNA integrity scanning protein DisA complement(3836298..3837359) Clostridium botulinum A3 str. Loch Maree 6152116 YP_001788850.1 CDS radA NC_010520.1 3837378 3838736 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(3837378..3838736) Clostridium botulinum A3 str. Loch Maree 6152614 YP_001788851.1 CDS clpC NC_010520.1 3838857 3841292 R identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence MecB/ClpC complement(3838857..3841292) Clostridium botulinum A3 str. Loch Maree 6153556 YP_001788852.1 CDS CLK_2957 NC_010520.1 3841294 3842337 R identified by match to protein family HMM PF00217; ATP:guanido phosphotransferase complement(3841294..3842337) Clostridium botulinum A3 str. Loch Maree 6153662 YP_001788853.1 CDS CLK_2958 NC_010520.1 3842342 3842869 R identified by match to protein family HMM PF02151; UVR domain-containing protein complement(3842342..3842869) Clostridium botulinum A3 str. Loch Maree 6154732 YP_001788854.1 CDS ctsR NC_010520.1 3842892 3843356 R identified by match to protein family HMM PF05848; transciptional repressor CtsR complement(3842892..3843356) Clostridium botulinum A3 str. Loch Maree 6153644 YP_001788855.1 CDS CLK_2960 NC_010520.1 3843752 3843982 R hypothetical protein complement(3843752..3843982) Clostridium botulinum A3 str. Loch Maree 6154366 YP_001788856.1 CDS fusA NC_010520.1 3844328 3846400 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3844328..3846400) Clostridium botulinum A3 str. Loch Maree 6152124 YP_001788857.1 CDS murD NC_010520.1 3857404 3858780 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(3857404..3858780) Clostridium botulinum A3 str. Loch Maree 6155098 YP_001788858.1 CDS glyS NC_010520.1 3859615 3861006 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(3859615..3861006) Clostridium botulinum A3 str. Loch Maree 6154234 YP_001788859.1 CDS lysS NC_010520.1 3861326 3862840 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(3861326..3862840) Clostridium botulinum A3 str. Loch Maree 6153207 YP_001788860.1 CDS greA NC_010520.1 3862859 3863341 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(3862859..3863341) Clostridium botulinum A3 str. Loch Maree 6152540 YP_001788861.1 CDS CLK_2985 NC_010520.1 3863472 3864299 R hypothetical protein complement(3863472..3864299) Clostridium botulinum A3 str. Loch Maree 6151575 YP_001788862.1 CDS CLK_2986 NC_010520.1 3864349 3865320 R identified by match to protein family HMM PF01180; match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase complement(3864349..3865320) Clostridium botulinum A3 str. Loch Maree 6154831 YP_001788863.1 CDS CLK_2987 NC_010520.1 3865330 3866106 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(3865330..3866106) Clostridium botulinum A3 str. Loch Maree 6153823 YP_001788864.1 CDS fhs NC_010520.1 3866261 3867934 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(3866261..3867934) Clostridium botulinum A3 str. Loch Maree 6151352 YP_001788865.1 CDS ftsH NC_010520.1 3868137 3869942 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH complement(3868137..3869942) Clostridium botulinum A3 str. Loch Maree 6152204 YP_001788866.1 CDS hpt NC_010520.1 3870024 3870569 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase complement(3870024..3870569) Clostridium botulinum A3 str. Loch Maree 6153409 YP_001788867.1 CDS tilS NC_010520.1 3870553 3871959 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase complement(3870553..3871959) Clostridium botulinum A3 str. Loch Maree 6153783 YP_001788868.1 CDS spoIIE NC_010520.1 3872108 3874495 R identified by match to protein family HMM PF07228; match to protein family HMM TIGR02865; stage II sporulation protein E complement(3872108..3874495) Clostridium botulinum A3 str. Loch Maree 6153593 YP_001788869.1 CDS CLK_2998 NC_010520.1 3875632 3876036 R identified by match to protein family HMM PF00575; hypothetical protein complement(3875632..3876036) Clostridium botulinum A3 str. Loch Maree 6155038 YP_001788870.1 CDS CLK_2999 NC_010520.1 3876098 3876367 R identified by match to protein family HMM PF04977; cell division protein FtsL complement(3876098..3876367) Clostridium botulinum A3 str. Loch Maree 6154598 YP_001788871.1 CDS CLK_3000 NC_010520.1 3876462 3876860 R identified by match to protein family HMM TIGR02893; hypothetical protein complement(3876462..3876860) Clostridium botulinum A3 str. Loch Maree 6154390 YP_001788872.1 CDS yabP NC_010520.1 3876875 3877165 R identified by match to protein family HMM PF07873; match to protein family HMM TIGR02892; sporulation protein YabP complement(3876875..3877165) Clostridium botulinum A3 str. Loch Maree 6154079 YP_001788873.1 CDS CLK_3002 NC_010520.1 3877284 3877523 R identified by match to protein family HMM PF01479; S4 domain-containing protein complement(3877284..3877523) Clostridium botulinum A3 str. Loch Maree 6152722 YP_001788874.1 CDS hup NC_010520.1 3877597 3877875 R identified by match to protein family HMM PF00216; DNA-binding protein HU complement(3877597..3877875) Clostridium botulinum A3 str. Loch Maree 6151529 YP_001788875.1 CDS CLK_3004 NC_010520.1 3878003 3879448 R identified by match to protein family HMM PF00590; match to protein family HMM PF03819; match to protein family HMM TIGR00444; MazG family protein complement(3878003..3879448) Clostridium botulinum A3 str. Loch Maree 6154806 YP_001788876.1 CDS spoVB NC_010520.1 3879463 3880998 R identified by match to protein family HMM PF01554; match to protein family HMM PF01943; match to protein family HMM PF03023; stage V sporulation protein B complement(3879463..3880998) Clostridium botulinum A3 str. Loch Maree 6154562 YP_001788877.1 CDS CLK_3006 NC_010520.1 3881131 3881682 R identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; match to protein family HMM TIGR02851; stage V sporulation protein T complement(3881131..3881682) Clostridium botulinum A3 str. Loch Maree 6152066 YP_001788878.1 CDS prsA NC_010520.1 3881881 3882888 R cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase complement(3881881..3882888) Clostridium botulinum A3 str. Loch Maree 6154709 YP_001788879.1 CDS mfd NC_010520.1 3882972 3886478 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(3882972..3886478) Clostridium botulinum A3 str. Loch Maree 6153676 YP_001788880.1 CDS pth NC_010520.1 3886506 3887075 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(3886506..3887075) Clostridium botulinum A3 str. Loch Maree 6152840 YP_001788881.1 CDS CLK_3010 NC_010520.1 3887185 3888357 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; protease complement(3887185..3888357) Clostridium botulinum A3 str. Loch Maree 6152210 YP_001788882.1 CDS CLK_3011 NC_010520.1 3888392 3889801 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(3888392..3889801) Clostridium botulinum A3 str. Loch Maree 6152229 YP_001788883.1 CDS CLK_3012 NC_010520.1 3889802 3890488 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(3889802..3890488) Clostridium botulinum A3 str. Loch Maree 6154163 YP_001788884.1 CDS prsA NC_010520.1 3890668 3891627 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(3890668..3891627) Clostridium botulinum A3 str. Loch Maree 6153336 YP_001788885.1 CDS glmU NC_010520.1 3891648 3893021 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3891648..3893021) Clostridium botulinum A3 str. Loch Maree 6152485 YP_001788886.1 CDS spoVG NC_010520.1 3893183 3893470 R stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG complement(3893183..3893470) Clostridium botulinum A3 str. Loch Maree 6152493 YP_001788887.1 CDS purR NC_010520.1 3893573 3894388 R identified by match to protein family HMM PF00156; match to protein family HMM PF09182; match to protein family HMM TIGR01743; pur operon repressor complement(3893573..3894388) Clostridium botulinum A3 str. Loch Maree 6153436 YP_001788888.1 CDS murC NC_010520.1 3894588 3895964 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 3894588..3895964 Clostridium botulinum A3 str. Loch Maree 6153026 YP_001788889.1 CDS CLK_3018 NC_010520.1 3896029 3896337 D hypothetical protein 3896029..3896337 Clostridium botulinum A3 str. Loch Maree 6153383 YP_001788890.1 CDS CLK_3020 NC_010520.1 3896584 3897933 D identified by match to protein family HMM PF00037; match to protein family HMM PF02906; [Fe] hydrogenase 3896584..3897933 Clostridium botulinum A3 str. Loch Maree 6155027 YP_001788891.1 CDS CLK_3021 NC_010520.1 3898019 3898663 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; haloacid dehalogenase 3898019..3898663 Clostridium botulinum A3 str. Loch Maree 6151766 YP_001788892.1 CDS CLK_3022 NC_010520.1 3898937 3899335 D hypothetical protein 3898937..3899335 Clostridium botulinum A3 str. Loch Maree 6151749 YP_001788893.1 CDS CLK_3023 NC_010520.1 3899402 3900121 R catalyzes the formation of (2R)-3-sulfolactate from (2R)-2-phospho-3-sulfolactate; 2-phosphosulfolactate phosphatase complement(3899402..3900121) Clostridium botulinum A3 str. Loch Maree 6152520 YP_001788894.1 CDS CLK_3024 NC_010520.1 3900166 3901098 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212; radical SAM family protein complement(3900166..3901098) Clostridium botulinum A3 str. Loch Maree 6154848 YP_001788895.1 CDS CLK_3025 NC_010520.1 3901166 3902293 R phage head-tail adaptor complement(3901166..3902293) Clostridium botulinum A3 str. Loch Maree 6152193 YP_001788896.1 CDS CLK_3026 NC_010520.1 3902432 3903478 D hypothetical protein 3902432..3903478 Clostridium botulinum A3 str. Loch Maree 6154034 YP_001788897.1 CDS CLK_3027 NC_010520.1 3903511 3904407 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 3903511..3904407 Clostridium botulinum A3 str. Loch Maree 6153055 YP_001788898.1 CDS CLK_3028 NC_010520.1 3904557 3906353 R identified by match to protein family HMM PF00015; match to protein family HMM PF07700; methyl-accepting chemotaxis protein complement(3904557..3906353) Clostridium botulinum A3 str. Loch Maree 6154342 YP_001788899.1 CDS CLK_3029 NC_010520.1 3906656 3907318 R identified by match to protein family HMM PF01381; DNA-binding protein complement(3906656..3907318) Clostridium botulinum A3 str. Loch Maree 6154710 YP_001788900.1 CDS CLK_3030 NC_010520.1 3907333 3907707 R hypothetical protein complement(3907333..3907707) Clostridium botulinum A3 str. Loch Maree 6151826 YP_001788901.1 CDS CLK_3031 NC_010520.1 3907725 3908243 R identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3907725..3908243) Clostridium botulinum A3 str. Loch Maree 6153029 YP_001788902.1 CDS murI NC_010520.1 3908389 3909162 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(3908389..3909162) Clostridium botulinum A3 str. Loch Maree 6154797 YP_001788903.1 CDS CLK_3033 NC_010520.1 3909355 3911253 D identified by match to protein family HMM PF00120; glutamine synthetase 3909355..3911253 Clostridium botulinum A3 str. Loch Maree 6151458 YP_001788904.1 CDS CLK_3034 NC_010520.1 3911298 3911846 R hypothetical protein complement(3911298..3911846) Clostridium botulinum A3 str. Loch Maree 6152348 YP_001788905.1 CDS murA NC_010520.1 3912242 3913495 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3912242..3913495 Clostridium botulinum A3 str. Loch Maree 6153565 YP_001788906.1 CDS CLK_3036 NC_010520.1 3913521 3914306 D identified by match to protein family HMM PF00753; metallo-beta-lactamase 3913521..3914306 Clostridium botulinum A3 str. Loch Maree 6154695 YP_001788907.1 CDS CLK_3037 NC_010520.1 3914323 3914904 D lipoprotein 3914323..3914904 Clostridium botulinum A3 str. Loch Maree 6153941 YP_001788908.1 CDS CLK_3038 NC_010520.1 3914919 3915422 D identified by match to protein family HMM PF02810; hypothetical protein 3914919..3915422 Clostridium botulinum A3 str. Loch Maree 6152827 YP_001788909.1 CDS CLK_3039 NC_010520.1 3915601 3916080 D SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3915601..3916080 Clostridium botulinum A3 str. Loch Maree 6152224 YP_001788910.1 CDS CLK_3040 NC_010520.1 3916220 3916792 R identified by Glimmer3; hypothetical protein complement(3916220..3916792) Clostridium botulinum A3 str. Loch Maree 6154464 YP_001788911.1 CDS CLK_3041 NC_010520.1 3917103 3918137 D identified by match to protein family HMM PF02518; match to protein family HMM PF07730; sensor histidine kinase 3917103..3918137 Clostridium botulinum A3 str. Loch Maree 6153432 YP_001788912.1 CDS CLK_3042 NC_010520.1 3918140 3918799 D identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281; transcriptional regulatory protein DegU 3918140..3918799 Clostridium botulinum A3 str. Loch Maree 6152939 YP_001788913.1 CDS CLK_3043 NC_010520.1 3919140 3919526 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 3919140..3919526 Clostridium botulinum A3 str. Loch Maree 6152126 YP_001788914.1 CDS map NC_010520.1 3919558 3920433 D identified by match to protein family HMM PF00557; match to protein family HMM PF02810; match to protein family HMM TIGR00500; methionine aminopeptidase 3919558..3920433 Clostridium botulinum A3 str. Loch Maree 6151369 YP_001788915.1 CDS CLK_3045 NC_010520.1 3920523 3921062 R identified by match to protein family HMM PF00881; nitroreductase complement(3920523..3921062) Clostridium botulinum A3 str. Loch Maree 6154194 YP_001788916.1 CDS CLK_3046 NC_010520.1 3921306 3922067 R D-proline reductase subunit PrdA complement(3921306..3922067) Clostridium botulinum A3 str. Loch Maree 6153899 YP_001788917.1 CDS CLK_3047 NC_010520.1 3922142 3922612 R D-proline reductase subunit PrdA complement(3922142..3922612) Clostridium botulinum A3 str. Loch Maree 6151813 YP_001788918.1 CDS prdB-2 NC_010520.1 3922792 3923517 R D-proline reductase subunit PrdB complement(3922792..3923517) Clostridium botulinum A3 str. Loch Maree 6153430 YP_001788919.1 CDS CLK_3049 NC_010520.1 3923544 3923735 R hypothetical protein complement(3923544..3923735) Clostridium botulinum A3 str. Loch Maree 6154456 YP_001788920.1 CDS CLK_3050 NC_010520.1 3923738 3925483 R identified by match to protein family HMM PF09338; glycine/sarcosine/betaine reductase, component B subunits alpha and beta complement(3923738..3925483) Clostridium botulinum A3 str. Loch Maree 6154944 YP_001788921.1 CDS CLK_3051 NC_010520.1 3925590 3926876 R identified by match to protein family HMM PF01512; respiratory-chain NADH dehydrogenase complement(3925590..3926876) Clostridium botulinum A3 str. Loch Maree 6152439 YP_001788922.1 CDS CLK_3052 NC_010520.1 3927432 3928928 D hypothetical protein 3927432..3928928 Clostridium botulinum A3 str. Loch Maree 6154402 YP_001788923.1 CDS CLK_3053 NC_010520.1 3928921 3929757 D identified by match to protein family HMM PF00037; match to protein family HMM PF04055; radical SAM domain-containing protein 3928921..3929757 Clostridium botulinum A3 str. Loch Maree 6153546 YP_001788924.1 CDS CLK_3054 NC_010520.1 3930093 3930344 D hypothetical protein 3930093..3930344 Clostridium botulinum A3 str. Loch Maree 6152299 YP_001788925.1 CDS CLK_3055 NC_010520.1 3930347 3931393 D catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 3930347..3931393 Clostridium botulinum A3 str. Loch Maree 6151479 YP_001788926.1 CDS thiH NC_010520.1 3931394 3932770 D in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH 3931394..3932770 Clostridium botulinum A3 str. Loch Maree 6152020 YP_001788927.1 CDS CLK_3057 NC_010520.1 3932779 3933972 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; GTP-binding protein 3932779..3933972 Clostridium botulinum A3 str. Loch Maree 6152507 YP_001788928.1 CDS CLK_3058 NC_010520.1 3934340 3935713 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 3934340..3935713 Clostridium botulinum A3 str. Loch Maree 6153788 YP_001788929.1 CDS CLK_3059 NC_010520.1 3936013 3937257 D identified by match to protein family HMM PF00534; glycoside hydrolase family protein 3936013..3937257 Clostridium botulinum A3 str. Loch Maree 6154494 YP_001788930.1 CDS CLK_3060 NC_010520.1 3937517 3938194 R identified by match to protein family HMM PF02811; phosphoesterase complement(3937517..3938194) Clostridium botulinum A3 str. Loch Maree 6152206 YP_001788931.1 CDS CLK_3061 NC_010520.1 3938490 3938975 D identified by match to protein family HMM PF08761; hypothetical protein 3938490..3938975 Clostridium botulinum A3 str. Loch Maree 6153036 YP_001788932.1 CDS CLK_3062 NC_010520.1 3939082 3939513 D identified by match to protein family HMM PF04657; hypothetical protein 3939082..3939513 Clostridium botulinum A3 str. Loch Maree 6152383 YP_001788933.1 CDS CLK_3063 NC_010520.1 3939694 3940599 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3939694..3940599 Clostridium botulinum A3 str. Loch Maree 6153205 YP_001788934.1 CDS CLK_3064 NC_010520.1 3940687 3941883 D identified by match to protein family HMM PF00082; subtilase 3940687..3941883 Clostridium botulinum A3 str. Loch Maree 6154703 YP_001788935.1 CDS CLK_3065 NC_010520.1 3941916 3942797 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(3941916..3942797) Clostridium botulinum A3 str. Loch Maree 6151781 YP_001788936.1 CDS CLK_3066 NC_010520.1 3942826 3943773 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase complement(3942826..3943773) Clostridium botulinum A3 str. Loch Maree 6153102 YP_001788937.1 CDS accA NC_010520.1 3943989 3944828 R identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, carboxyl transferase subunit alpha complement(3943989..3944828) Clostridium botulinum A3 str. Loch Maree 6151465 YP_001788938.1 CDS accD NC_010520.1 3944875 3945744 R identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(3944875..3945744) Clostridium botulinum A3 str. Loch Maree 6153996 YP_001788939.1 CDS accC NC_010520.1 3945764 3947110 R identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM PF08443; match to protein family HMM TIGR00514; biotin carboxylase complement(3945764..3947110) Clostridium botulinum A3 str. Loch Maree 6153194 YP_001788940.1 CDS fabZ NC_010520.1 3947142 3947576 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3947142..3947576) Clostridium botulinum A3 str. Loch Maree 6153939 YP_001788941.1 CDS accB NC_010520.1 3947596 3948072 R identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(3947596..3948072) Clostridium botulinum A3 str. Loch Maree 6154724 YP_001788942.1 CDS fabF NC_010520.1 3948076 3949314 R FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(3948076..3949314) Clostridium botulinum A3 str. Loch Maree 6154557 YP_001788943.1 CDS fabG NC_010520.1 3949334 3950080 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(3949334..3950080) Clostridium botulinum A3 str. Loch Maree 6153774 YP_001788944.1 CDS fabD NC_010520.1 3950098 3951042 R identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase complement(3950098..3951042) Clostridium botulinum A3 str. Loch Maree 6152942 YP_001788945.1 CDS CLK_3075 NC_010520.1 3951063 3951989 R identified by match to protein family HMM PF03060; match to protein family HMM TIGR03151; 2-nitropropane dioxygenase complement(3951063..3951989) Clostridium botulinum A3 str. Loch Maree 6152171 YP_001788946.1 CDS acpP NC_010520.1 3952115 3952339 R identified by match to protein family HMM PF00550; acyl carrier protein complement(3952115..3952339) Clostridium botulinum A3 str. Loch Maree 6151368 YP_001788947.1 CDS fabH NC_010520.1 3952380 3953360 R identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-ACP synthase complement(3952380..3953360) Clostridium botulinum A3 str. Loch Maree 6153704 YP_001788948.1 CDS CLK_3078 NC_010520.1 3953353 3953829 R identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator complement(3953353..3953829) Clostridium botulinum A3 str. Loch Maree 6152917 YP_001788949.1 CDS CLK_3079 NC_010520.1 3953845 3954903 R identified by match to protein family HMM PF03060; 2-nitropropane dioxygenase complement(3953845..3954903) Clostridium botulinum A3 str. Loch Maree 6152015 YP_001788950.1 CDS CLK_3080 NC_010520.1 3955001 3955936 R identified by match to protein family HMM PF01551; peptidase complement(3955001..3955936) Clostridium botulinum A3 str. Loch Maree 6154949 YP_001788951.1 CDS CLK_3081 NC_010520.1 3956117 3957103 D identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446; DNA replication protein DnaD 3956117..3957103 Clostridium botulinum A3 str. Loch Maree 6153204 YP_001788952.1 CDS CLK_3082 NC_010520.1 3957096 3958073 D acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 3957096..3958073 Clostridium botulinum A3 str. Loch Maree 6152539 YP_001788953.1 CDS CLK_3095 NC_010520.1 3959317 3960126 R identified by match to protein family HMM PF03618; hypothetical protein complement(3959317..3960126) Clostridium botulinum A3 str. Loch Maree 6155021 YP_001788954.1 CDS CLK_3096 NC_010520.1 3960139 3960513 R identified by match to protein family HMM PF02629; CoA-binding protein complement(3960139..3960513) Clostridium botulinum A3 str. Loch Maree 6153727 YP_001788955.1 CDS CLK_3097 NC_010520.1 3960694 3961923 D identified by match to protein family HMM PF03486; match to protein family HMM TIGR00275; pyridine nucleotide-disulfide oxidoreductase 3960694..3961923 Clostridium botulinum A3 str. Loch Maree 6153123 YP_001788956.1 CDS CLK_3098 NC_010520.1 3962024 3962773 R identified by match to protein family HMM PF01643; acyl-ACP thioesterase complement(3962024..3962773) Clostridium botulinum A3 str. Loch Maree 6154156 YP_001788957.1 CDS CLK_3099 NC_010520.1 3962876 3963061 R hypothetical protein complement(3962876..3963061) Clostridium botulinum A3 str. Loch Maree 6154768 YP_001788958.1 CDS purA NC_010520.1 3963186 3964472 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(3963186..3964472) Clostridium botulinum A3 str. Loch Maree 6153537 YP_001788959.1 CDS CLK_3101 NC_010520.1 3964704 3966089 R pyridine nucleotide-disulfide oxidoreductase complement(3964704..3966089) Clostridium botulinum A3 str. Loch Maree 6153118 YP_001788960.1 CDS CLK_3102 NC_010520.1 3966259 3966474 R identified by Glimmer3; hypothetical protein complement(3966259..3966474) Clostridium botulinum A3 str. Loch Maree 6151868 YP_001788961.1 CDS CLK_3103 NC_010520.1 3966679 3968400 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase complement(3966679..3968400) Clostridium botulinum A3 str. Loch Maree 6152174 YP_001788962.1 CDS dnaB NC_010520.1 3968642 3969979 R unwinds double stranded DNA; replicative DNA helicase complement(3968642..3969979) Clostridium botulinum A3 str. Loch Maree 6154901 YP_001788963.1 CDS CLK_3105 NC_010520.1 3970010 3971929 R identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR02903; ATP-dependent protease complement(3970010..3971929) Clostridium botulinum A3 str. Loch Maree 6152302 YP_001788964.1 CDS rplI NC_010520.1 3971940 3972383 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(3971940..3972383) Clostridium botulinum A3 str. Loch Maree 6151507 YP_001788965.1 CDS CLK_3107 NC_010520.1 3972383 3974368 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH family protein complement(3972383..3974368) Clostridium botulinum A3 str. Loch Maree 6151511 YP_001788966.1 CDS CLK_3108 NC_010520.1 3974369 3975373 R hypothetical protein complement(3974369..3975373) Clostridium botulinum A3 str. Loch Maree 6151881 YP_001788967.1 CDS CLK_3109 NC_010520.1 3975385 3975702 R hypothetical protein complement(3975385..3975702) Clostridium botulinum A3 str. Loch Maree 6153193 YP_001788968.1 CDS rpsR NC_010520.1 3975851 3976093 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(3975851..3976093) Clostridium botulinum A3 str. Loch Maree 6154253 YP_001788969.1 CDS ssb NC_010520.1 3976112 3976558 R identified by match to protein family HMM PF00436; match to protein family HMM PF01336; match to protein family HMM TIGR00621; single-strand binding protein complement(3976112..3976558) Clostridium botulinum A3 str. Loch Maree 6152963 YP_001788970.1 CDS rpsF NC_010520.1 3976574 3976858 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(3976574..3976858) Clostridium botulinum A3 str. Loch Maree 6152152 YP_001788971.1 CDS CLK_3113 NC_010520.1 3976963 3978111 R identified by match to protein family HMM PF06050; R-2-hydroxyglutaryl-CoA dehydratase subunit complement(3976963..3978111) Clostridium botulinum A3 str. Loch Maree 6154670 YP_001788972.1 CDS CLK_3114 NC_010520.1 3978385 3978582 R identified by match to protein family HMM PF06107; hypothetical protein complement(3978385..3978582) Clostridium botulinum A3 str. Loch Maree 6153936 YP_001788973.1 CDS CLK_3115 NC_010520.1 3978598 3979467 R identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(3978598..3979467) Clostridium botulinum A3 str. Loch Maree 6153213 YP_001788974.1 CDS CLK_3116 NC_010520.1 3979474 3979719 R hypothetical protein complement(3979474..3979719) Clostridium botulinum A3 str. Loch Maree 6152972 YP_001788975.1 CDS CLK_3117 NC_010520.1 3979910 3981064 D identified by match to protein family HMM PF00266; match to protein family HMM TIGR01977; cysteine desulfurase 3979910..3981064 Clostridium botulinum A3 str. Loch Maree 6151597 YP_001788976.1 CDS ytvI NC_010520.1 3981078 3982133 D identified by match to protein family HMM PF01594; match to protein family HMM TIGR02872; sporulation integral membrane protein YtvI 3981078..3982133 Clostridium botulinum A3 str. Loch Maree 6152091 YP_001788977.1 CDS CLK_3119 NC_010520.1 3982191 3982772 D identified by match to protein family HMM PF06866; match to protein family HMM TIGR02841; hypothetical protein 3982191..3982772 Clostridium botulinum A3 str. Loch Maree 6154742 YP_001788978.1 CDS CLK_3120 NC_010520.1 3982774 3983019 R identified by Glimmer3; hypothetical protein complement(3982774..3983019) Clostridium botulinum A3 str. Loch Maree 6152648 YP_001788979.1 CDS CLK_3121 NC_010520.1 3983072 3983581 R hypothetical protein complement(3983072..3983581) Clostridium botulinum A3 str. Loch Maree 6151564 YP_001788980.1 CDS CLK_3122 NC_010520.1 3983619 3984467 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; stage 0 sporulation protein J complement(3983619..3984467) Clostridium botulinum A3 str. Loch Maree 6151584 YP_001788981.1 CDS soj NC_010520.1 3984483 3985247 R identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein soj complement(3984483..3985247) Clostridium botulinum A3 str. Loch Maree 6154435 YP_001788982.1 CDS CLK_3124 NC_010520.1 3985371 3986150 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; parB family protein complement(3985371..3986150) Clostridium botulinum A3 str. Loch Maree 6154070 YP_001788983.1 CDS gidB NC_010520.1 3986250 3986969 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3986250..3986969) Clostridium botulinum A3 str. Loch Maree 6153081 YP_001788984.1 CDS gidA NC_010520.1 3986993 3988870 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3986993..3988870) Clostridium botulinum A3 str. Loch Maree 6153574 YP_001788985.1 CDS trmE NC_010520.1 3988879 3990264 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3988879..3990264) Clostridium botulinum A3 str. Loch Maree 6153668 YP_001788986.1 CDS jag NC_010520.1 3990312 3990938 R identified by match to protein family HMM PF01424; jag protein complement(3990312..3990938) Clostridium botulinum A3 str. Loch Maree 6151879 YP_001788987.1 CDS oxaA NC_010520.1 3990956 3991609 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(3990956..3991609) Clostridium botulinum A3 str. Loch Maree 6153143 YP_001788988.1 CDS CLK_3130 NC_010520.1 3991635 3991844 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(3991635..3991844) Clostridium botulinum A3 str. Loch Maree 6153951 YP_001788989.1 CDS rnpA NC_010520.1 3991841 3992176 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3991841..3992176) Clostridium botulinum A3 str. Loch Maree 6153320 YP_001788990.1 CDS rpmH NC_010520.1 3992231 3992365 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3992231..3992365) Clostridium botulinum A3 str. Loch Maree 6154271 CLK_3819 tRNA CLK_3819 NC_010520.1 14100 14178 D tRNA-Met 14100..14178 Clostridium botulinum A3 str. Loch Maree 6155081 CLK_3820 tRNA CLK_3820 NC_010520.1 14180 14257 D tRNA-Ala 14180..14257 Clostridium botulinum A3 str. Loch Maree 6155051 CLK_3822 tRNA CLK_3822 NC_010520.1 23891 23983 D tRNA-Ser 23891..23983 Clostridium botulinum A3 str. Loch Maree 6153515 CLK_3823 tRNA CLK_3823 NC_010520.1 24002 24094 D tRNA-Ser 24002..24094 Clostridium botulinum A3 str. Loch Maree 6155017 CLK_3824 tRNA CLK_3824 NC_010520.1 24399 24491 D tRNA-Ser 24399..24491 Clostridium botulinum A3 str. Loch Maree 6155031 CLK_3825 tRNA CLK_3825 NC_010520.1 24510 24602 D tRNA-Ser 24510..24602 Clostridium botulinum A3 str. Loch Maree 6155025 CLK_3826 tRNA CLK_3826 NC_010520.1 24685 24763 D tRNA-Arg 24685..24763 Clostridium botulinum A3 str. Loch Maree 6155039 CLK_3827 tRNA CLK_3827 NC_010520.1 27976 28052 D tRNA-Arg 27976..28052 Clostridium botulinum A3 str. Loch Maree 6154471 CLK_3828 tRNA CLK_3828 NC_010520.1 31824 31915 D tRNA-Ser 31824..31915 Clostridium botulinum A3 str. Loch Maree 6152661 CLK_3833 tRNA CLK_3833 NC_010520.1 47457 47534 D tRNA-Lys 47457..47534 Clostridium botulinum A3 str. Loch Maree 6155100 CLK_3837 tRNA CLK_3837 NC_010520.1 53996 54073 D tRNA-Lys 53996..54073 Clostridium botulinum A3 str. Loch Maree 6155090 CLK_3841 tRNA CLK_3841 NC_010520.1 61873 61950 D tRNA-Phe 61873..61950 Clostridium botulinum A3 str. Loch Maree 6155085 CLK_3845 tRNA CLK_3845 NC_010520.1 68877 68954 D tRNA-Phe 68877..68954 Clostridium botulinum A3 str. Loch Maree 6155094 CLK_3849 tRNA CLK_3849 NC_010520.1 76347 76420 D tRNA-Cys 76347..76420 Clostridium botulinum A3 str. Loch Maree 6152460 CLK_3852 tRNA CLK_3852 NC_010520.1 193235 193310 D tRNA-Thr 193235..193310 Clostridium botulinum A3 str. Loch Maree 6151750 CLK_3853 tRNA CLK_3853 NC_010520.1 193315 193401 D tRNA-Tyr 193315..193401 Clostridium botulinum A3 str. Loch Maree 6155018 CLK_3854 tRNA CLK_3854 NC_010520.1 193413 193490 D tRNA-Val 193413..193490 Clostridium botulinum A3 str. Loch Maree 6155001 CLK_3855 tRNA CLK_3855 NC_010520.1 193507 193582 D tRNA-Thr 193507..193582 Clostridium botulinum A3 str. Loch Maree 6155052 CLK_3856 tRNA CLK_3856 NC_010520.1 193587 193673 D tRNA-Tyr 193587..193673 Clostridium botulinum A3 str. Loch Maree 6155060 CLK_3860 tRNA CLK_3860 NC_010520.1 220508 220584 R tRNA-Gln complement(220508..220584) Clostridium botulinum A3 str. Loch Maree 6153429 CLK_3868 tRNA CLK_3868 NC_010520.1 504831 504908 D tRNA-Ala 504831..504908 Clostridium botulinum A3 str. Loch Maree 6155077 CLK_3869 tRNA CLK_3869 NC_010520.1 504913 504989 D tRNA-Ile 504913..504989 Clostridium botulinum A3 str. Loch Maree 6154999 CLK_3872 tRNA CLK_3872 NC_010520.1 508220 508296 D tRNA-Asn 508220..508296 Clostridium botulinum A3 str. Loch Maree 6155101 CLK_3875 tRNA CLK_3875 NC_010520.1 588558 588632 D tRNA-Glu 588558..588632 Clostridium botulinum A3 str. Loch Maree 6151722 CLK_3901 tRNA CLK_3901 NC_010520.1 3234246 3234342 R tRNA-Sec complement(3234246..3234342) Clostridium botulinum A3 str. Loch Maree 6151619 CLK_3902 tRNA CLK_3902 NC_010520.1 3269178 3269262 R tRNA-Leu complement(3269178..3269262) Clostridium botulinum A3 str. Loch Maree 6154880 CLK_3903 tRNA CLK_3903 NC_010520.1 3303446 3303534 R tRNA-Leu complement(3303446..3303534) Clostridium botulinum A3 str. Loch Maree 6153489 CLK_3906 tRNA CLK_3906 NC_010520.1 3418263 3418336 R tRNA-Cys complement(3418263..3418336) Clostridium botulinum A3 str. Loch Maree 6152381 CLK_3907 tRNA CLK_3907 NC_010520.1 3418346 3418420 R tRNA-Gly complement(3418346..3418420) Clostridium botulinum A3 str. Loch Maree 6154997 CLK_3908 tRNA CLK_3908 NC_010520.1 3418424 3418501 R tRNA-Phe complement(3418424..3418501) Clostridium botulinum A3 str. Loch Maree 6155007 CLK_3909 tRNA CLK_3909 NC_010520.1 3418503 3418581 R tRNA-Asp complement(3418503..3418581) Clostridium botulinum A3 str. Loch Maree 6155022 CLK_3910 tRNA CLK_3910 NC_010520.1 3418586 3418661 R tRNA-Val complement(3418586..3418661) Clostridium botulinum A3 str. Loch Maree 6155035 CLK_3912 tRNA CLK_3912 NC_010520.1 3539919 3539995 R tRNA-Arg complement(3539919..3539995) Clostridium botulinum A3 str. Loch Maree 6152331 CLK_3913 tRNA CLK_3913 NC_010520.1 3540021 3540094 R tRNA-Gly complement(3540021..3540094) Clostridium botulinum A3 str. Loch Maree 6155061 CLK_3914 tRNA CLK_3914 NC_010520.1 3540123 3540200 R tRNA-Pro complement(3540123..3540200) Clostridium botulinum A3 str. Loch Maree 6155066 CLK_3915 tRNA CLK_3915 NC_010520.1 3540226 3540301 R tRNA-Lys complement(3540226..3540301) Clostridium botulinum A3 str. Loch Maree 6155050 CLK_3916 tRNA CLK_3916 NC_010520.1 3540306 3540384 R tRNA-Arg complement(3540306..3540384) Clostridium botulinum A3 str. Loch Maree 6155024 CLK_3917 tRNA CLK_3917 NC_010520.1 3540390 3540463 R tRNA-Gly complement(3540390..3540463) Clostridium botulinum A3 str. Loch Maree 6155048 CLK_3918 tRNA CLK_3918 NC_010520.1 3540472 3540546 R tRNA-Gly complement(3540472..3540546) Clostridium botulinum A3 str. Loch Maree 6155070 CLK_3919 tRNA CLK_3919 NC_010520.1 3540620 3540705 R tRNA-Leu complement(3540620..3540705) Clostridium botulinum A3 str. Loch Maree 6155015 CLK_3920 tRNA CLK_3920 NC_010520.1 3540719 3540796 R tRNA-Lys complement(3540719..3540796) Clostridium botulinum A3 str. Loch Maree 6155019 CLK_3921 tRNA CLK_3921 NC_010520.1 3540798 3540874 R tRNA-Gln complement(3540798..3540874) Clostridium botulinum A3 str. Loch Maree 6155008 CLK_3922 tRNA CLK_3922 NC_010520.1 3540877 3540954 R tRNA-His complement(3540877..3540954) Clostridium botulinum A3 str. Loch Maree 6155004 CLK_3923 tRNA CLK_3923 NC_010520.1 3540969 3541044 R tRNA-Lys complement(3540969..3541044) Clostridium botulinum A3 str. Loch Maree 6155064 CLK_3924 tRNA CLK_3924 NC_010520.1 3541049 3541127 R tRNA-Arg complement(3541049..3541127) Clostridium botulinum A3 str. Loch Maree 6155029 CLK_3925 tRNA CLK_3925 NC_010520.1 3541133 3541206 R tRNA-Gly complement(3541133..3541206) Clostridium botulinum A3 str. Loch Maree 6155037 CLK_3926 tRNA CLK_3926 NC_010520.1 3541215 3541289 R tRNA-Gly complement(3541215..3541289) Clostridium botulinum A3 str. Loch Maree 6155071 CLK_3927 tRNA CLK_3927 NC_010520.1 3541363 3541448 R tRNA-Leu complement(3541363..3541448) Clostridium botulinum A3 str. Loch Maree 6155047 CLK_3928 tRNA CLK_3928 NC_010520.1 3541462 3541539 R tRNA-Lys complement(3541462..3541539) Clostridium botulinum A3 str. Loch Maree 6155002 CLK_3929 tRNA CLK_3929 NC_010520.1 3541541 3541617 R tRNA-Gln complement(3541541..3541617) Clostridium botulinum A3 str. Loch Maree 6155072 CLK_3930 tRNA CLK_3930 NC_010520.1 3541620 3541697 R tRNA-His complement(3541620..3541697) Clostridium botulinum A3 str. Loch Maree 6155055 CLK_3931 tRNA CLK_3931 NC_010520.1 3541703 3541781 R tRNA-Arg complement(3541703..3541781) Clostridium botulinum A3 str. Loch Maree 6154996 CLK_3932 tRNA CLK_3932 NC_010520.1 3541787 3541860 R tRNA-Gly complement(3541787..3541860) Clostridium botulinum A3 str. Loch Maree 6155053 CLK_3933 tRNA CLK_3933 NC_010520.1 3541867 3541944 R tRNA-Pro complement(3541867..3541944) Clostridium botulinum A3 str. Loch Maree 6155040 CLK_3935 tRNA CLK_3935 NC_010520.1 3612511 3612588 R tRNA-Trp complement(3612511..3612588) Clostridium botulinum A3 str. Loch Maree 6153140 CLK_3942 tRNA CLK_3942 NC_010520.1 3825745 3825820 R tRNA-Thr complement(3825745..3825820) Clostridium botulinum A3 str. Loch Maree 6154304 CLK_3943 tRNA CLK_3943 NC_010520.1 3825838 3825914 R tRNA-Gly complement(3825838..3825914) Clostridium botulinum A3 str. Loch Maree 6155041 CLK_3944 tRNA CLK_3944 NC_010520.1 3846586 3846662 R tRNA-Asn complement(3846586..3846662) Clostridium botulinum A3 str. Loch Maree 6152949 CLK_3945 tRNA CLK_3945 NC_010520.1 3846688 3846764 R tRNA-Asn complement(3846688..3846764) Clostridium botulinum A3 str. Loch Maree 6155057 CLK_3948 tRNA CLK_3948 NC_010520.1 3849954 3850030 R tRNA-Ile complement(3849954..3850030) Clostridium botulinum A3 str. Loch Maree 6155089 CLK_3950 tRNA CLK_3950 NC_010520.1 3851835 3851912 R tRNA-Ala complement(3851835..3851912) Clostridium botulinum A3 str. Loch Maree 6155096 CLK_3951 tRNA CLK_3951 NC_010520.1 3851914 3851992 R tRNA-Met complement(3851914..3851992) Clostridium botulinum A3 str. Loch Maree 6155005 CLK_3956 tRNA CLK_3956 NC_010520.1 3874824 3874902 R tRNA-Met complement(3874824..3874902) Clostridium botulinum A3 str. Loch Maree 6152349 CLK_3957 tRNA CLK_3957 NC_010520.1 3874911 3874988 R tRNA-Met complement(3874911..3874988) Clostridium botulinum A3 str. Loch Maree 6155009 CLK_3958 tRNA CLK_3958 NC_010520.1 3875040 3875117 R tRNA-Met complement(3875040..3875117) Clostridium botulinum A3 str. Loch Maree 6155075 CLK_3959 tRNA CLK_3959 NC_010520.1 3875120 3875210 R tRNA-Leu complement(3875120..3875210) Clostridium botulinum A3 str. Loch Maree 6154998 CLK_3960 tRNA CLK_3960 NC_010520.1 3875240 3875318 R tRNA-Met complement(3875240..3875318) Clostridium botulinum A3 str. Loch Maree 6155063 CLK_3961 tRNA CLK_3961 NC_010520.1 3875321 3875398 R tRNA-Met complement(3875321..3875398) Clostridium botulinum A3 str. Loch Maree 6155065 CLK_3962 tRNA CLK_3962 NC_010520.1 3875401 3875491 R tRNA-Leu complement(3875401..3875491) Clostridium botulinum A3 str. Loch Maree 6155059 CLK_3963 tRNA CLK_3963 NC_010520.1 3896415 3896492 D tRNA-Pro 3896415..3896492 Clostridium botulinum A3 str. Loch Maree 6154131 CLK_3964 tRNA CLK_3964 NC_010520.1 3958164 3958239 R tRNA-Thr complement(3958164..3958239) Clostridium botulinum A3 str. Loch Maree 6151784 CLK_3965 tRNA CLK_3965 NC_010520.1 3958243 3958321 R tRNA-Asp complement(3958243..3958321) Clostridium botulinum A3 str. Loch Maree 6155043 CLK_3966 tRNA CLK_3966 NC_010520.1 3958329 3958406 R tRNA-Val complement(3958329..3958406) Clostridium botulinum A3 str. Loch Maree 6155034 CLK_3967 tRNA CLK_3967 NC_010520.1 3958422 3958498 R tRNA-Glu complement(3958422..3958498) Clostridium botulinum A3 str. Loch Maree 6155023 CLK_3968 tRNA CLK_3968 NC_010520.1 3958554 3958632 R tRNA-Asp complement(3958554..3958632) Clostridium botulinum A3 str. Loch Maree 6155056 CLK_3969 tRNA CLK_3969 NC_010520.1 3958638 3958715 R tRNA-Val complement(3958638..3958715) Clostridium botulinum A3 str. Loch Maree 6155033 CLK_3970 tRNA CLK_3970 NC_010520.1 3958732 3958808 R tRNA-Glu complement(3958732..3958808) Clostridium botulinum A3 str. Loch Maree 6155003 CLK_3971 tRNA CLK_3971 NC_010520.1 3958813 3958888 R tRNA-Thr complement(3958813..3958888) Clostridium botulinum A3 str. Loch Maree 6155026 CLK_3972 tRNA CLK_3972 NC_010520.1 3958892 3958970 R tRNA-Asp complement(3958892..3958970) Clostridium botulinum A3 str. Loch Maree 6155049 CLK_3973 tRNA CLK_3973 NC_010520.1 3958978 3959055 R tRNA-Val complement(3958978..3959055) Clostridium botulinum A3 str. Loch Maree 6155014 CLK_3974 tRNA CLK_3974 NC_010520.1 3959072 3959146 R tRNA-Glu complement(3959072..3959146) Clostridium botulinum A3 str. Loch Maree 6155030 CLK_3816 rRNA rrsA NC_010520.1 9258 10759 D 16S ribosomal RNA 9258..10759 Clostridium botulinum A3 str. Loch Maree 6151336 CLK_3817 rRNA rrlA NC_010520.1 10981 13882 D 23S ribosomal RNA 10981..13882 Clostridium botulinum A3 str. Loch Maree 6155079 CLK_3818 rRNA rrfA NC_010520.1 13976 14092 D 5S ribosomal RNA 13976..14092 Clostridium botulinum A3 str. Loch Maree 6155091 CLK_3830 rRNA rrsB NC_010520.1 42659 44160 D 16S ribosomal RNA 42659..44160 Clostridium botulinum A3 str. Loch Maree 6154790 CLK_3831 rRNA rrlB NC_010520.1 44382 47283 D 23S ribosomal RNA 44382..47283 Clostridium botulinum A3 str. Loch Maree 6155097 CLK_3832 rRNA rrfB NC_010520.1 47335 47451 D 5S ribosomal RNA 47335..47451 Clostridium botulinum A3 str. Loch Maree 6155076 CLK_3834 rRNA rrsC NC_010520.1 49198 50699 D 16S ribosomal RNA 49198..50699 Clostridium botulinum A3 str. Loch Maree 6153797 CLK_3835 rRNA rrlC NC_010520.1 50921 53822 D 23S ribosomal RNA 50921..53822 Clostridium botulinum A3 str. Loch Maree 6155088 CLK_3836 rRNA rrfC NC_010520.1 53874 53990 D 5S ribosomal RNA 53874..53990 Clostridium botulinum A3 str. Loch Maree 6155099 CLK_3838 rRNA rrsD NC_010520.1 57075 58576 D 16S ribosomal RNA 57075..58576 Clostridium botulinum A3 str. Loch Maree 6154331 CLK_3839 rRNA rrlD NC_010520.1 58798 61699 D 23S ribosomal RNA 58798..61699 Clostridium botulinum A3 str. Loch Maree 6155087 CLK_3840 rRNA rrfD NC_010520.1 61750 61866 D 5S ribosomal RNA 61750..61866 Clostridium botulinum A3 str. Loch Maree 6155084 CLK_3842 rRNA rrsE NC_010520.1 64079 65580 D 16S ribosomal RNA 64079..65580 Clostridium botulinum A3 str. Loch Maree 6152633 CLK_3843 rRNA rrlE NC_010520.1 65802 68703 D 23S ribosomal RNA 65802..68703 Clostridium botulinum A3 str. Loch Maree 6155095 CLK_3844 rRNA rrfE NC_010520.1 68754 68870 D 5S ribosomal RNA 68754..68870 Clostridium botulinum A3 str. Loch Maree 6155082 CLK_3846 rRNA rrsF NC_010520.1 70359 71860 D 16S ribosomal RNA 70359..71860 Clostridium botulinum A3 str. Loch Maree 6152258 CLK_3847 rRNA rrlF NC_010520.1 72082 74983 D 23S ribosomal RNA 72082..74983 Clostridium botulinum A3 str. Loch Maree 6155083 CLK_3848 rRNA rrfF NC_010520.1 75035 75151 D 5S ribosomal RNA 75035..75151 Clostridium botulinum A3 str. Loch Maree 6155078 CLK_3867 rRNA rrsG NC_010520.1 503187 504688 D 16S ribosomal RNA 503187..504688 Clostridium botulinum A3 str. Loch Maree 6152067 CLK_3870 rRNA rrlG NC_010520.1 505063 507964 D 23S ribosomal RNA 505063..507964 Clostridium botulinum A3 str. Loch Maree 6155000 CLK_3871 rRNA rrfG NC_010520.1 508096 508212 D 5S ribosomal RNA 508096..508212 Clostridium botulinum A3 str. Loch Maree 6155102 CLK_3946 rRNA rrfH NC_010520.1 3846772 3846888 R 5S ribosomal RNA complement(3846772..3846888) Clostridium botulinum A3 str. Loch Maree 6155006 CLK_3947 rRNA rrlH NC_010520.1 3846979 3849880 R 23S ribosomal RNA complement(3846979..3849880) Clostridium botulinum A3 str. Loch Maree 6155093 CLK_3949 rRNA rrsH NC_010520.1 3850117 3851618 R 16S ribosomal RNA complement(3850117..3851618) Clostridium botulinum A3 str. Loch Maree 6155016 CLK_3952 rRNA rrfI NC_010520.1 3851999 3852115 R 5S ribosomal RNA complement(3851999..3852115) Clostridium botulinum A3 str. Loch Maree 6154995 CLK_3953 rRNA rrlI NC_010520.1 3852208 3855109 R 23S ribosomal RNA complement(3852208..3855109) Clostridium botulinum A3 str. Loch Maree 6155086 CLK_3954 rRNA rrsI NC_010520.1 3855331 3856832 R 16S ribosomal RNA complement(3855331..3856832) Clostridium botulinum A3 str. Loch Maree 6155092