-- dump date 20240506_024736 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP014176.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014176.1.REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson.REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328xREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014176.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source DNA available from Shannon Johnson. ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP014175.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP014175.1.REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson.REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328xREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBioREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP014175.1. Source DNA available from Shannon Johnson. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Velvet v. 1.2.08; HGAP v. 3; Phrap v. 4.24 Genome Coverage :: 152x; 328x Sequencing Technology :: Illumina; PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 03/05/2024 02:30:51 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,426 CDSs (total) :: 4,296 Genes (coding) :: 4,237 CDSs (with protein) :: 4,237 Genes (RNA) :: 130 rRNAs :: 10, 10, 10 (5S, 16S, 23S) complete rRNAs :: 10, 10, 10 (5S, 16S, 23S) tRNAs :: 96 ncRNAs :: 4 Pseudo Genes (total) :: 59 CDSs (without protein) :: 59 Pseudo Genes (ambiguous residues) :: 0 of 59 Pseudo Genes (frameshifted) :: 22 of 59 Pseudo Genes (incomplete) :: 36 of 59 Pseudo Genes (internal stop) :: 17 of 59 Pseudo Genes (multiple problems) :: 13 of 59 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.