-- dump date 20140619_042313 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003474445.1 289450862 8811061 94..1410 1 NC_013895.2 identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 1410 dnaA 8811061 dnaA Clostridiales genomosp. BVAB3 str. UPII9-5 chromosomal replication initiator protein DnaA YP_003474445.1 94 D 699246 CDS YP_003474444.1 289450447 8810141 1653..2756 1 NC_013895.2 identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 2756 dnaN 8810141 dnaN Clostridiales genomosp. BVAB3 str. UPII9-5 DNA polymerase III subunit beta YP_003474444.1 1653 D 699246 CDS YP_003474443.1 289449549 8810278 2820..3968 1 NC_013895.2 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; putative DNA replication and repair protein RecF 3968 8810278 HMPREF0868_0091 Clostridiales genomosp. BVAB3 str. UPII9-5 putative DNA replication and repair protein RecF YP_003474443.1 2820 D 699246 CDS YP_003474442.1 289449682 8810798 3990..4268 1 NC_013895.2 hypothetical protein 4268 8810798 HMPREF0868_0090 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474442.1 3990 D 699246 CDS YP_003474441.1 289450191 8810148 4311..6401 1 NC_013895.2 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 6401 gyrB 8810148 gyrB Clostridiales genomosp. BVAB3 str. UPII9-5 DNA gyrase subunit B YP_003474441.1 4311 D 699246 CDS YP_003474440.1 289449556 8811218 complement(6498..7466) 1 NC_013895.2 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like protein 7466 8811218 HMPREF0868_0088 Clostridiales genomosp. BVAB3 str. UPII9-5 ParB-like protein YP_003474440.1 6498 R 699246 CDS YP_003474439.1 289450601 8810614 complement(7588..8367) 1 NC_013895.2 identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein Soj 8367 soj 8810614 soj Clostridiales genomosp. BVAB3 str. UPII9-5 sporulation initiation inhibitor protein Soj YP_003474439.1 7588 R 699246 CDS YP_003474438.1 289450010 8811440 8503..8619 1 NC_013895.2 hypothetical protein 8619 8811440 HMPREF0868_0086 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474438.1 8503 D 699246 CDS YP_003474437.1 289450810 8811111 8682..8795 1 NC_013895.2 hypothetical protein 8795 8811111 HMPREF0868_0085 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474437.1 8682 D 699246 CDS YP_003933617.1 308513211 8810023 9485..10210 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 10210 8810023 HMPREF0868_0084 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933617.1 9485 D 699246 CDS YP_003933618.1 308513212 9829212 10264..10587 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 10587 9829212 HMPREF0868_1647 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933618.1 10264 D 699246 CDS YP_003933619.1 308513213 8810895 10747..10890 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 10890 8810895 HMPREF0868_0082 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933619.1 10747 D 699246 CDS YP_003474436.1 289450284 8810801 complement(11050..11535) 1 NC_013895.2 identified by match to protein family HMM PF00293; NUDIX family hydrolase 11535 8810801 HMPREF0868_0081 Clostridiales genomosp. BVAB3 str. UPII9-5 NUDIX family hydrolase YP_003474436.1 11050 R 699246 CDS YP_003474435.1 289450193 8810295 11757..12587 1 NC_013895.2 identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate binding protein 12587 pstS 8810295 pstS Clostridiales genomosp. BVAB3 str. UPII9-5 phosphate binding protein YP_003474435.1 11757 D 699246 CDS YP_003474434.1 289449699 8810982 12604..13497 1 NC_013895.2 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease PstC 13497 pstC 8810982 pstC Clostridiales genomosp. BVAB3 str. UPII9-5 phosphate ABC transporter permease PstC YP_003474434.1 12604 D 699246 CDS YP_003474433.1 289450368 8810025 13532..14401 1 NC_013895.2 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease PstA 14401 pstA 8810025 pstA Clostridiales genomosp. BVAB3 str. UPII9-5 phosphate ABC transporter permease PstA YP_003474433.1 13532 D 699246 CDS YP_003474432.1 289449436 8811092 14403..15161 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 15161 pstB 8811092 pstB Clostridiales genomosp. BVAB3 str. UPII9-5 phosphate ABC transporter ATP-binding protein YP_003474432.1 14403 D 699246 CDS YP_003474431.1 289450478 8810037 15323..15991 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative DNA-binding response regulator 15991 8810037 HMPREF0868_0076 Clostridiales genomosp. BVAB3 str. UPII9-5 putative DNA-binding response regulator YP_003474431.1 15323 D 699246 CDS YP_003474430.1 289449447 8810580 15988..17316 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; putative alkaline phosphatase synthesis sensor protein PhoR 17316 8810580 HMPREF0868_0075 Clostridiales genomosp. BVAB3 str. UPII9-5 putative alkaline phosphatase synthesis sensor protein PhoR YP_003474430.1 15988 D 699246 CDS YP_003474429.1 289449976 8810382 17393..17806 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 17806 8810382 HMPREF0868_0074 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003474429.1 17393 D 699246 CDS YP_003474428.1 289449784 8811449 17848..18522 1 NC_013895.2 hypothetical protein 18522 8811449 HMPREF0868_0072 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474428.1 17848 D 699246 CDS YP_003474427.1 289450819 8811157 complement(18512..18685) 1 NC_013895.2 hypothetical protein 18685 8811157 HMPREF0868_0073 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474427.1 18512 R 699246 CDS YP_003474426.1 289450540 8810703 18833..21022 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 21022 8810703 HMPREF0868_0071 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474426.1 18833 D 699246 CDS YP_003474425.1 289450098 8810966 21382..23100 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 23100 8810966 HMPREF0868_0070 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474425.1 21382 D 699246 CDS YP_003474424.1 289450352 8810440 23090..24796 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 24796 8810440 HMPREF0868_0069 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474424.1 23090 D 699246 CDS YP_003474423.1 289449839 8810369 24905..26140 1 NC_013895.2 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 26140 8810369 HMPREF0868_0068 Clostridiales genomosp. BVAB3 str. UPII9-5 AhpC/TSA family antioxidant YP_003474423.1 24905 D 699246 CDS YP_003474422.1 289449771 8811423 26200..26385 1 NC_013895.2 hypothetical protein 26385 8811423 HMPREF0868_0067 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474422.1 26200 D 699246 CDS YP_003474421.1 289450795 8811474 26378..27322 1 NC_013895.2 identified by match to protein family HMM PF00037; 4Fe-4S binding domain-containing protein 27322 8811474 HMPREF0868_0066 Clostridiales genomosp. BVAB3 str. UPII9-5 4Fe-4S binding domain-containing protein YP_003474421.1 26378 D 699246 CDS YP_003474420.1 289450843 8810101 27326..28006 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative transcriptional regulatory protein CutR 28006 8810101 HMPREF0868_0065 Clostridiales genomosp. BVAB3 str. UPII9-5 putative transcriptional regulatory protein CutR YP_003474420.1 27326 D 699246 CDS YP_003474419.1 289449509 8810824 28061..28183 1 NC_013895.2 hypothetical protein 28183 8810824 HMPREF0868_0064 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474419.1 28061 D 699246 CDS YP_003474418.1 289450216 8811520 28200..29387 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 29387 8811520 HMPREF0868_0063 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003474418.1 28200 D 699246 CDS YP_003474417.1 289449366 8810179 29528..29656 1 NC_013895.2 hypothetical protein 29656 8810179 HMPREF0868_0061 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474417.1 29528 D 699246 CDS YP_003474416.1 289449586 8810622 29681..31591 1 NC_013895.2 identified by match to protein family HMM PF01431; match to protein family HMM PF05649; putative neutral endopeptidase 31591 8810622 HMPREF0868_0060 Clostridiales genomosp. BVAB3 str. UPII9-5 putative neutral endopeptidase YP_003474416.1 29681 D 699246 CDS YP_003474415.1 289450018 8811503 complement(31722..32837) 1 NC_013895.2 hypothetical protein 32837 8811503 HMPREF0868_0059 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474415.1 31722 R 699246 CDS YP_003474414.1 289450870 8810466 32876..33079 1 NC_013895.2 hypothetical protein 33079 8810466 HMPREF0868_0058 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474414.1 32876 D 699246 CDS YP_003474413.1 289449865 8811362 complement(33261..34370) 1 NC_013895.2 hypothetical protein 34370 8811362 HMPREF0868_0057 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474413.1 33261 R 699246 CDS YP_003474412.1 289450738 8811012 complement(34524..35783) 1 NC_013895.2 identified by match to protein family HMM PF07690; major facilitator family transporter 35783 8811012 HMPREF0868_0056 Clostridiales genomosp. BVAB3 str. UPII9-5 major facilitator family transporter YP_003474412.1 34524 R 699246 CDS YP_003474411.1 289450398 8811284 complement(35876..36925) 1 NC_013895.2 identified by match to protein family HMM PF00561; hydrolase, alpha/beta domain-containing protein 36925 8811284 HMPREF0868_0055 Clostridiales genomosp. BVAB3 str. UPII9-5 hydrolase, alpha/beta domain-containing protein YP_003474411.1 35876 R 699246 CDS YP_003474410.1 289450662 8810822 37001..38512 1 NC_013895.2 identified by match to protein family HMM PF01743; tRNA nucleotidyltransferase/poly(A) polymerase family protein 38512 8810822 HMPREF0868_0054 Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA nucleotidyltransferase/poly(A) polymerase family protein YP_003474410.1 37001 D 699246 CDS YP_003474409.1 289450214 8810321 complement(38673..39821) 1 NC_013895.2 identified by match to protein family HMM PF00465; NADPH-dependent butanol dehydrogenase 39821 adh1 8810321 adh1 Clostridiales genomosp. BVAB3 str. UPII9-5 NADPH-dependent butanol dehydrogenase YP_003474409.1 38673 R 699246 CDS YP_003474408.1 289449723 8811439 39943..40149 1 NC_013895.2 hypothetical protein 40149 8811439 HMPREF0868_0052 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474408.1 39943 D 699246 CDS YP_003474407.1 289450809 8810552 40211..40453 1 NC_013895.2 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 40453 secG 8810552 secG Clostridiales genomosp. BVAB3 str. UPII9-5 preprotein translocase subunit SecG YP_003474407.1 40211 D 699246 CDS YP_003474406.1 289449948 8811233 40497..40697 1 NC_013895.2 hypothetical protein 40697 8811233 HMPREF0868_0050 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474406.1 40497 D 699246 CDS YP_003474405.1 289450616 8810341 41229..43181 1 NC_013895.2 identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358; putative ribonuclease R 43181 8810341 HMPREF0868_0049 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribonuclease R YP_003474405.1 41229 D 699246 CDS YP_003474404.1 289449743 8810285 complement(43348..43578) 1 NC_013895.2 hypothetical protein 43578 8810285 HMPREF0868_0048 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474404.1 43348 R 699246 CDS YP_003474403.1 289449689 8810460 43663..45054 1 NC_013895.2 identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; MiaB-like protein 45054 8810460 HMPREF0868_0047 Clostridiales genomosp. BVAB3 str. UPII9-5 MiaB-like protein YP_003474403.1 43663 D 699246 CDS YP_003474402.1 289449859 8810911 45156..45419 1 NC_013895.2 identified by match to protein family HMM PF06135; hypothetical protein 45419 8810911 HMPREF0868_0046 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474402.1 45156 D 699246 CDS YP_003474401.1 289450300 8810656 45502..45924 1 NC_013895.2 identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; YqgF family RNAse H domain-containing protein 45924 8810656 HMPREF0868_0045 Clostridiales genomosp. BVAB3 str. UPII9-5 YqgF family RNAse H domain-containing protein YP_003474401.1 45502 D 699246 CDS YP_003474400.1 289450051 8810256 45986..46420 1 NC_013895.2 hypothetical protein 46420 8810256 HMPREF0868_0044 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474400.1 45986 D 699246 CDS YP_003474399.1 289449660 8810918 46427..46828 1 NC_013895.2 hypothetical protein 46828 8810918 HMPREF0868_0043 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474399.1 46427 D 699246 CDS YP_003474398.1 289450307 8811245 46825..47913 1 NC_013895.2 hypothetical protein 47913 8811245 HMPREF0868_0042 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474398.1 46825 D 699246 CDS YP_003474397.1 289450626 8810924 47940..48974 1 NC_013895.2 identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 48974 8810924 HMPREF0868_0041 Clostridiales genomosp. BVAB3 str. UPII9-5 CAAX amino terminal protease family protein YP_003474397.1 47940 D 699246 CDS YP_003474396.1 289450312 8810343 48987..52166 1 NC_013895.2 hypothetical protein 52166 8810343 HMPREF0868_0040 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474396.1 48987 D 699246 CDS YP_003474395.1 289449745 8811239 complement(52259..53287) 1 NC_013895.2 identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; HAD hydrolase 53287 8811239 HMPREF0868_0039 Clostridiales genomosp. BVAB3 str. UPII9-5 HAD hydrolase YP_003474395.1 52259 R 699246 CDS YP_003474394.1 289450622 8810554 complement(53339..54253) 1 NC_013895.2 identified by match to protein family HMM PF01557; FAH family protein 54253 8810554 HMPREF0868_0038 Clostridiales genomosp. BVAB3 str. UPII9-5 FAH family protein YP_003474394.1 53339 R 699246 CDS YP_003474393.1 289449950 8810178 54447..55718 1 NC_013895.2 identified by match to protein family HMM PF07690; major facilitator family transporter 55718 8810178 HMPREF0868_0037 Clostridiales genomosp. BVAB3 str. UPII9-5 major facilitator family transporter YP_003474393.1 54447 D 699246 CDS YP_003474392.1 289449585 8810437 complement(55920..57023) 1 NC_013895.2 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein 57023 8810437 HMPREF0868_0036 Clostridiales genomosp. BVAB3 str. UPII9-5 transposase, IS605 OrfB family protein YP_003474392.1 55920 R 699246 CDS YP_003933620.1 308513214 8811488 complement(57041..57250) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 57250 8811488 HMPREF0868_0035 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933620.1 57041 R 699246 CDS YP_003474391.1 289450856 8810615 complement(57621..60323) 1 NC_013895.2 putative type IV conjugative transfer system protein TraL 60323 8810615 HMPREF0868_0034 Clostridiales genomosp. BVAB3 str. UPII9-5 putative type IV conjugative transfer system protein TraL YP_003474391.1 57621 R 699246 CDS YP_003474390.1 289450011 8810902 complement(60333..62822) 1 NC_013895.2 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; E1-E2 ATPase 62822 8810902 HMPREF0868_0033 Clostridiales genomosp. BVAB3 str. UPII9-5 E1-E2 ATPase YP_003474390.1 60333 R 699246 CDS YP_003474389.1 289450291 8809941 complement(62819..63316) 1 NC_013895.2 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding region 63316 8809941 HMPREF0868_0032 Clostridiales genomosp. BVAB3 str. UPII9-5 cytidine and deoxycytidylate deaminase zinc-binding region YP_003474389.1 62819 R 699246 CDS YP_003474388.1 289449357 8811036 complement(63522..65921) 1 NC_013895.2 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase 65921 8811036 HMPREF0868_0031 Clostridiales genomosp. BVAB3 str. UPII9-5 transglycosylase YP_003474388.1 63522 R 699246 CDS YP_003474387.1 289450422 8811329 65963..66412 1 NC_013895.2 hypothetical protein 66412 8811329 HMPREF0868_0030 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474387.1 65963 D 699246 CDS YP_003474386.1 289450705 8810655 66934..68100 1 NC_013895.2 hypothetical protein 68100 8810655 HMPREF0868_0029 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474386.1 66934 D 699246 CDS YP_003474385.1 289450050 8811170 complement(68132..69382) 1 NC_013895.2 identified by match to protein family HMM PF02388; FemAB family protein 69382 8811170 HMPREF0868_0028 Clostridiales genomosp. BVAB3 str. UPII9-5 FemAB family protein YP_003474385.1 68132 R 699246 CDS YP_003474384.1 289450553 8810493 complement(69669..70682) 1 NC_013895.2 identified by match to protein family HMM PF02653; putative ribose transport system permease RbsC 70682 8810493 HMPREF0868_0027 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribose transport system permease RbsC YP_003474384.1 69669 R 699246 CDS YP_003474383.1 289449892 8810997 complement(70675..72180) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 72180 8810997 HMPREF0868_0026 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474383.1 70675 R 699246 CDS YP_003474382.1 289450383 8810331 complement(72350..73399) 1 NC_013895.2 identified by match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein 73399 8810331 HMPREF0868_0025 Clostridiales genomosp. BVAB3 str. UPII9-5 periplasmic binding protein and sugar binding domain of the LacI family protein YP_003474382.1 72350 R 699246 CDS YP_003474381.1 289449733 8810698 73712..73855 1 NC_013895.2 hypothetical protein 73855 8810698 HMPREF0868_0024 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474381.1 73712 D 699246 CDS YP_003933621.1 308513215 9829208 complement(73870..73992) 1 NC_013895.2 hypothetical protein 73992 9829208 HMPREF0868_1648 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933621.1 73870 R 699246 CDS YP_003474380.1 289450093 8811209 73985..76009 1 NC_013895.2 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; putative 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 76009 8811209 HMPREF0868_0023 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase YP_003474380.1 73985 D 699246 CDS YP_003474378.1 289449847 8811010 76139..77161 1 NC_013895.2 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; NAD-binding domain-containing oxidoreductase 77161 8811010 HMPREF0868_0021 Clostridiales genomosp. BVAB3 str. UPII9-5 NAD-binding domain-containing oxidoreductase YP_003474378.1 76139 D 699246 CDS YP_003474377.1 289450396 8810317 77275..78285 1 NC_013895.2 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; putative inositol 2-dehydrogenase 78285 8810317 HMPREF0868_0020 Clostridiales genomosp. BVAB3 str. UPII9-5 putative inositol 2-dehydrogenase YP_003474377.1 77275 D 699246 CDS YP_003474376.1 289449720 8810470 78339..79238 1 NC_013895.2 identified by match to protein family HMM PF01261; putative inosose dehydratase 79238 8810470 HMPREF0868_0019 Clostridiales genomosp. BVAB3 str. UPII9-5 putative inosose dehydratase YP_003474376.1 78339 D 699246 CDS YP_003474375.1 289449869 8811160 79329..80468 1 NC_013895.2 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 80468 8811160 HMPREF0868_0018 Clostridiales genomosp. BVAB3 str. UPII9-5 LacI family transcriptional regulator YP_003474375.1 79329 D 699246 CDS YP_003474374.1 289450543 8810860 80545..81798 1 NC_013895.2 hypothetical protein 81798 8810860 HMPREF0868_0017 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474374.1 80545 D 699246 CDS YP_003474373.1 289450252 8810603 81929..82957 1 NC_013895.2 identified by match to protein family HMM PF00044; match to protein family HMM PF01113; match to protein family HMM PF02800; match to protein family HMM TIGR01546; type II glyceraldehyde-3-phosphate dehydrogenase 82957 8810603 HMPREF0868_0016 Clostridiales genomosp. BVAB3 str. UPII9-5 type II glyceraldehyde-3-phosphate dehydrogenase YP_003474373.1 81929 D 699246 CDS YP_003474372.1 289449999 8811022 82948..84204 1 NC_013895.2 identified by match to protein family HMM PF00162; phosphoglycerate kinase 84204 pgk 8811022 pgk Clostridiales genomosp. BVAB3 str. UPII9-5 phosphoglycerate kinase YP_003474372.1 82948 D 699246 CDS YP_003474371.1 289450408 8809960 84223..85080 1 NC_013895.2 identified by match to protein family HMM PF00456; transketolase, thiamine diphosphate binding domain-containing protein 85080 8809960 HMPREF0868_0014 Clostridiales genomosp. BVAB3 str. UPII9-5 transketolase, thiamine diphosphate binding domain-containing protein YP_003474371.1 84223 D 699246 CDS YP_003474370.1 289449376 8810163 85073..86035 1 NC_013895.2 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal domain-containing protein 86035 8810163 HMPREF0868_0013 Clostridiales genomosp. BVAB3 str. UPII9-5 transketolase, C-terminal domain-containing protein YP_003474370.1 85073 D 699246 CDS YP_003474369.1 289449571 8811144 86143..86940 1 NC_013895.2 identified by match to protein family HMM PF06845; myo-inositol catabolism protein 86940 iolB 8811144 iolB Clostridiales genomosp. BVAB3 str. UPII9-5 myo-inositol catabolism protein YP_003474369.1 86143 D 699246 CDS YP_003474368.1 289450528 8810468 complement(87469..87966) 1 NC_013895.2 hypothetical protein 87966 8810468 HMPREF0868_0011 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474368.1 87469 R 699246 CDS YP_003474367.1 289449867 8811194 complement(88428..89810) 1 NC_013895.2 identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047; carboxynorspermidine decarboxylase 89810 nspC 8811194 nspC Clostridiales genomosp. BVAB3 str. UPII9-5 carboxynorspermidine decarboxylase YP_003474367.1 88428 R 699246 CDS YP_003474366.1 289450577 8810489 complement(89963..91162) 1 NC_013895.2 identified by match to protein family HMM PF03435; saccharopine dehydrogenase 91162 lys1 8810489 lys1 Clostridiales genomosp. BVAB3 str. UPII9-5 saccharopine dehydrogenase YP_003474366.1 89963 R 699246 CDS YP_003474365.1 289449888 8810126 complement(91275..92147) 1 NC_013895.2 identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; agmatinase 92147 speB 8810126 speB Clostridiales genomosp. BVAB3 str. UPII9-5 agmatinase YP_003474365.1 91275 R 699246 CDS YP_003474364.1 289449534 8810624 complement(92229..93089) 1 NC_013895.2 identified by match to protein family HMM PF01564; match to protein family HMM TIGR00417; spermidine synthase 93089 speE 8810624 speE Clostridiales genomosp. BVAB3 str. UPII9-5 spermidine synthase YP_003474364.1 92229 R 699246 CDS YP_003474363.1 289450020 8810280 93063..93203 1 NC_013895.2 putative lipoprotein 93203 8810280 HMPREF0868_0006 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003474363.1 93063 D 699246 CDS YP_003474361.1 289450169 8810384 complement(93370..95409) 1 NC_013895.2 identified by match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01276; match to protein family HMM PF03711; arginine 2-monooxygenase family protein 95409 8810384 HMPREF0868_0004 Clostridiales genomosp. BVAB3 str. UPII9-5 arginine 2-monooxygenase family protein YP_003474361.1 93370 R 699246 CDS YP_003474360.1 289449786 8811278 complement(95451..96275) 1 NC_013895.2 identified by match to protein family HMM PF02675; match to protein family HMM TIGR03331; S-adenosylmethionine decarboxylase proenzyme 96275 speD 8811278 speD Clostridiales genomosp. BVAB3 str. UPII9-5 S-adenosylmethionine decarboxylase proenzyme YP_003474360.1 95451 R 699246 CDS YP_003474359.1 289450657 8811566 complement(96425..97540) 1 NC_013895.2 hypothetical protein 97540 8811566 HMPREF0868_0002 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474359.1 96425 R 699246 CDS YP_003475884.1 289449956 8810729 complement(97808..98917) 1 NC_013895.2 hypothetical protein 98917 8810729 HMPREF0868_1646 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475884.1 97808 R 699246 CDS YP_003475883.1 289450124 8810479 99119..99295 1 NC_013895.2 hypothetical protein 99295 8810479 HMPREF0868_1645 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475883.1 99119 D 699246 CDS YP_003475882.1 289449878 8811191 99422..100090 1 NC_013895.2 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD hydrolase 100090 8811191 HMPREF0868_1643 Clostridiales genomosp. BVAB3 str. UPII9-5 HAD hydrolase YP_003475882.1 99422 D 699246 CDS YP_003475881.1 289450574 8811009 complement(100087..100560) 1 NC_013895.2 identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; YbaK/EbsC protein 100560 8811009 HMPREF0868_1644 Clostridiales genomosp. BVAB3 str. UPII9-5 YbaK/EbsC protein YP_003475881.1 100087 R 699246 CDS YP_003475880.1 289450395 8809952 100624..100827 1 NC_013895.2 hypothetical protein 100827 8809952 HMPREF0868_1642 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475880.1 100624 D 699246 CDS YP_003475879.1 289449368 8811432 100920..101108 1 NC_013895.2 hypothetical protein 101108 8811432 HMPREF0868_1641 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475879.1 100920 D 699246 CDS YP_003475878.1 289450804 8810605 complement(101189..101422) 1 NC_013895.2 hypothetical protein 101422 8810605 HMPREF0868_1640 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475878.1 101189 R 699246 CDS YP_003475877.1 289450001 8810670 101394..106940 1 NC_013895.2 hypothetical protein 106940 8810670 HMPREF0868_1639 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475877.1 101394 D 699246 CDS YP_003475876.1 289450065 8811308 107059..107187 1 NC_013895.2 hypothetical protein 107187 8811308 HMPREF0868_1638 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475876.1 107059 D 699246 CDS YP_003475875.1 289450686 8810434 107330..108391 1 NC_013895.2 hypothetical protein 108391 8810434 HMPREF0868_1637 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475875.1 107330 D 699246 CDS YP_003475874.1 289449834 8810135 complement(108756..109451) 1 NC_013895.2 hypothetical protein 109451 8810135 HMPREF0868_1636 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475874.1 108756 R 699246 CDS YP_003475873.1 289449543 8810742 109620..110000 1 NC_013895.2 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; putative endoribonuclease L-PSP 110000 8810742 HMPREF0868_1635 Clostridiales genomosp. BVAB3 str. UPII9-5 putative endoribonuclease L-PSP YP_003475873.1 109620 D 699246 CDS YP_003475872.1 289450137 8810130 110396..111694 1 NC_013895.2 identified by match to protein family HMM PF07690; major facilitator family transporter 111694 8810130 HMPREF0868_1634 Clostridiales genomosp. BVAB3 str. UPII9-5 major facilitator family transporter YP_003475872.1 110396 D 699246 CDS YP_003475871.1 289449538 8811281 111861..112802 1 NC_013895.2 identified by match to protein family HMM PF00724; putative NADPH dehydrogenase 112802 8811281 HMPREF0868_1633 Clostridiales genomosp. BVAB3 str. UPII9-5 putative NADPH dehydrogenase YP_003475871.1 111861 D 699246 CDS YP_003475870.1 289450659 8810257 112952..113956 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 113956 8810257 HMPREF0868_1632 Clostridiales genomosp. BVAB3 str. UPII9-5 response regulator receiver domain-containing protein YP_003475870.1 112952 D 699246 CDS YP_003475869.1 289449661 8810587 113960..115831 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 115831 8810587 HMPREF0868_1631 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003475869.1 113960 D 699246 CDS YP_003475868.1 289449983 8811497 115869..116750 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 116750 8811497 HMPREF0868_1630 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475868.1 115869 D 699246 CDS YP_003475867.1 289450864 8811102 116747..117499 1 NC_013895.2 hypothetical protein 117499 8811102 HMPREF0868_1629 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475867.1 116747 D 699246 CDS YP_003475866.1 289450488 8810255 117515..117637 1 NC_013895.2 hypothetical protein 117637 8810255 HMPREF0868_1628 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475866.1 117515 D 699246 CDS YP_003475865.1 289449659 8810727 complement(117655..120180) 1 NC_013895.2 identified by match to protein family HMM PF01433; membrane alanyl aminopeptidase 120180 pepN 8810727 pepN Clostridiales genomosp. BVAB3 str. UPII9-5 membrane alanyl aminopeptidase YP_003475865.1 117655 R 699246 CDS YP_003475864.1 289450122 8810032 120303..120422 1 NC_013895.2 hypothetical protein 120422 8810032 HMPREF0868_1626 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475864.1 120303 D 699246 CDS YP_003475863.1 289449443 8810367 120430..121404 1 NC_013895.2 identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF07992; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 121404 8810367 HMPREF0868_1625 Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme YP_003475863.1 120430 D 699246 CDS YP_003475862.1 289449769 8811401 complement(121585..123192) 1 NC_013895.2 hypothetical protein 123192 8811401 HMPREF0868_1624 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475862.1 121585 R 699246 CDS YP_003475861.1 289450776 8810175 123485..124888 1 NC_013895.2 hypothetical protein 124888 8810175 HMPREF0868_1623 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475861.1 123485 D 699246 CDS YP_003475860.1 289449582 8811552 125053..126345 1 NC_013895.2 hypothetical protein 126345 8811552 HMPREF0868_1622 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475860.1 125053 D 699246 CDS YP_003475859.1 289450417 8810985 127261..127608 1 NC_013895.2 hypothetical protein 127608 8810985 HMPREF0868_1619 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475859.1 127261 D 699246 CDS YP_003475858.1 289450371 8810049 127974..129449 1 NC_013895.2 identified by match to protein family HMM PF03577; dipeptidase 129449 pepD_1 8810049 pepD_1 Clostridiales genomosp. BVAB3 str. UPII9-5 dipeptidase YP_003475858.1 127974 D 699246 CDS YP_003475857.1 289449459 8810282 129617..130360 1 NC_013895.2 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 130360 8810282 HMPREF0868_1617 Clostridiales genomosp. BVAB3 str. UPII9-5 AhpC/TSA family antioxidant YP_003475857.1 129617 D 699246 CDS YP_003475856.1 289449686 8810429 130398..131159 1 NC_013895.2 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 131159 8810429 HMPREF0868_1616 Clostridiales genomosp. BVAB3 str. UPII9-5 AhpC/TSA family antioxidant YP_003475856.1 130398 D 699246 CDS YP_003475855.1 289449830 8811143 131356..132543 1 NC_013895.2 identified by match to protein family HMM PF00155; match to protein family HMM PF00202; match to protein family HMM TIGR01822; glycine C-acetyltransferase 132543 kbl 8811143 kbl Clostridiales genomosp. BVAB3 str. UPII9-5 glycine C-acetyltransferase YP_003475855.1 131356 D 699246 CDS YP_003475854.1 289450527 8810243 132710..133144 1 NC_013895.2 identified by match to protein family HMM PF00210; ferritin-like protein 133144 8810243 HMPREF0868_1614 Clostridiales genomosp. BVAB3 str. UPII9-5 ferritin-like protein YP_003475854.1 132710 D 699246 CDS YP_003475853.1 289449647 8810922 133311..133631 1 NC_013895.2 identified by match to protein family HMM PF01381; Xre family toxin-antitoxin system antitoxin protein 133631 8810922 HMPREF0868_1613 Clostridiales genomosp. BVAB3 str. UPII9-5 Xre family toxin-antitoxin system antitoxin protein YP_003475853.1 133311 D 699246 CDS YP_003475852.1 289450311 8811463 133678..133797 1 NC_013895.2 hypothetical protein 133797 8811463 HMPREF0868_1612 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475852.1 133678 D 699246 CDS YP_003475851.1 289450833 8811083 complement(133826..134104) 1 NC_013895.2 identified by match to protein family HMM PF05016; match to protein family HMM TIGR00053; match to protein family HMM TIGR02385; RelE family toxin-antitoxin system toxin protein 134104 8811083 HMPREF0868_1611 Clostridiales genomosp. BVAB3 str. UPII9-5 RelE family toxin-antitoxin system toxin protein YP_003475851.1 133826 R 699246 CDS YP_003475850.1 289450469 8811285 complement(134104..134379) 1 NC_013895.2 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 134379 8811285 HMPREF0868_1610 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein YP_003475850.1 134104 R 699246 CDS YP_003475849.1 289450663 8810617 complement(134776..135525) 1 NC_013895.2 identified by match to protein family HMM PF01027; hypothetical protein 135525 8810617 HMPREF0868_1609 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475849.1 134776 R 699246 CDS YP_003475848.1 289450013 8811499 135768..136616 1 NC_013895.2 hypothetical protein 136616 8811499 HMPREF0868_1608 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475848.1 135768 D 699246 CDS YP_003475847.1 289450866 8810721 136618..137955 1 NC_013895.2 identified by match to protein family HMM PF02492; CobW/P47K family protein 137955 8810721 HMPREF0868_1607 Clostridiales genomosp. BVAB3 str. UPII9-5 CobW/P47K family protein YP_003475847.1 136618 D 699246 CDS YP_003475846.1 289450116 8810204 137942..139732 1 NC_013895.2 identified by match to protein family HMM PF03773; putative permease 139732 8810204 HMPREF0868_1606 Clostridiales genomosp. BVAB3 str. UPII9-5 putative permease YP_003475846.1 137942 D 699246 CDS YP_003475845.1 289449611 8810368 139779..140762 1 NC_013895.2 identified by match to protein family HMM PF09323; match to protein family HMM TIGR03943; hypothetical protein 140762 8810368 HMPREF0868_1605 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475845.1 139779 D 699246 CDS YP_003475844.1 289449770 8809981 complement(140913..142226) 1 NC_013895.2 identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase 142226 eno 8809981 eno Clostridiales genomosp. BVAB3 str. UPII9-5 phosphopyruvate hydratase YP_003475844.1 140913 R 699246 CDS YP_003475843.1 289449395 8811100 142491..142946 1 NC_013895.2 identified by match to protein family HMM PF00903; glyoxalase family protein 142946 8811100 HMPREF0868_1603 Clostridiales genomosp. BVAB3 str. UPII9-5 glyoxalase family protein YP_003475843.1 142491 D 699246 CDS YP_003475842.1 289450486 8810136 143115..144113 1 NC_013895.2 identified by match to protein family HMM PF00485; phosphoribulokinase/uridine kinase family protein 144113 8810136 HMPREF0868_1602 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphoribulokinase/uridine kinase family protein YP_003475842.1 143115 D 699246 CDS YP_003475841.1 289449544 8811371 144129..146129 1 NC_013895.2 identified by match to protein family HMM PF00534; match to protein family HMM PF03808; match to protein family HMM TIGR00696; glycosyltransferase group 1 family protein 146129 8811371 HMPREF0868_1601 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyltransferase group 1 family protein YP_003475841.1 144129 D 699246 CDS YP_003475840.2 308513216 8810565 146160..147395 1 NC_013895.2 identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 147395 8810565 HMPREF0868_1600 Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-N-acetylglucosamine 2-epimerase YP_003475840.2 146160 D 699246 CDS YP_003475839.1 289449961 8811286 147398..149038 1 NC_013895.2 hypothetical protein 149038 8811286 HMPREF0868_1599 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475839.1 147398 D 699246 CDS YP_003475838.1 289450664 8810371 149195..151240 1 NC_013895.2 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; pullulanase 151240 pulA_1 8810371 pulA_1 Clostridiales genomosp. BVAB3 str. UPII9-5 pullulanase YP_003475838.1 149195 D 699246 CDS YP_003475837.1 289449773 8811038 complement(151356..152696) 1 NC_013895.2 identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 152696 8811038 HMPREF0868_1597 Clostridiales genomosp. BVAB3 str. UPII9-5 sodium:neurotransmitter symporter family protein YP_003475837.1 151356 R 699246 CDS YP_003475835.1 289450599 8810155 complement(152979..154622) 1 NC_013895.2 identified by match to protein family HMM PF01212; beta-eliminating lyase 154622 8810155 HMPREF0868_1596 Clostridiales genomosp. BVAB3 str. UPII9-5 beta-eliminating lyase YP_003475835.1 152979 R 699246 CDS YP_003475834.1 289449563 8811295 154981..155280 1 NC_013895.2 hypothetical protein 155280 8811295 HMPREF0868_1594 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475834.1 154981 D 699246 CDS YP_003475833.1 289450673 8810314 complement(155396..155758) 1 NC_013895.2 identified by match to protein family HMM PF05016; RelE family toxin-antitoxin system toxin protein 155758 8810314 HMPREF0868_1593 Clostridiales genomosp. BVAB3 str. UPII9-5 RelE family toxin-antitoxin system toxin protein YP_003475833.1 155396 R 699246 CDS YP_003475832.1 289449717 8811351 complement(155755..156054) 1 NC_013895.2 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain-containing protein 156054 8811351 HMPREF0868_1592 Clostridiales genomosp. BVAB3 str. UPII9-5 toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain-containing protein YP_003475832.1 155755 R 699246 CDS YP_003475831.1 289450727 8810449 complement(156182..156310) 1 NC_013895.2 hypothetical protein 156310 8810449 HMPREF0868_1591 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475831.1 156182 R 699246 CDS YP_003475830.1 289449848 8811479 156562..157887 1 NC_013895.2 identified by match to protein family HMM PF04143; YeeE/YedE family protein 157887 8811479 HMPREF0868_1590 Clostridiales genomosp. BVAB3 str. UPII9-5 YeeE/YedE family protein YP_003475830.1 156562 D 699246 CDS YP_003475829.1 289450848 8810714 158005..159702 1 NC_013895.2 identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 159702 8810714 HMPREF0868_1589 Clostridiales genomosp. BVAB3 str. UPII9-5 pyridine nucleotide-disulfide oxidoreductase YP_003475829.1 158005 D 699246 CDS YP_003475828.1 289450109 8810943 159901..161196 1 NC_013895.2 identified by match to protein family HMM PF04143; YeeE/YedE family protein 161196 8810943 HMPREF0868_1588 Clostridiales genomosp. BVAB3 str. UPII9-5 YeeE/YedE family protein YP_003475828.1 159901 D 699246 CDS YP_003475827.1 289450331 8810708 161298..162071 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 162071 8810708 HMPREF0868_1587 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475827.1 161298 D 699246 CDS YP_003475826.1 289450103 8811268 162071..163180 1 NC_013895.2 identified by match to protein family HMM PF04069; putative taurine ABC transporter periplasmic binding protein 163180 8811268 HMPREF0868_1586 Clostridiales genomosp. BVAB3 str. UPII9-5 putative taurine ABC transporter periplasmic binding protein YP_003475826.1 162071 D 699246 CDS YP_003475825.1 289450648 8810390 163290..164195 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 164195 8810390 HMPREF0868_1585 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475825.1 163290 D 699246 CDS YP_003475824.1 289449792 8809992 164211..165122 1 NC_013895.2 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 165122 8809992 HMPREF0868_1584 Clostridiales genomosp. BVAB3 str. UPII9-5 LysR substrate binding domain-containing protein YP_003475824.1 164211 D 699246 CDS YP_003475823.1 289449406 8811090 complement(165142..166242) 1 NC_013895.2 identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein 166242 8811090 HMPREF0868_1583 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyltransferase group 2 family protein YP_003475823.1 165142 R 699246 CDS YP_003475822.1 289450476 8810551 complement(166252..167304) 1 NC_013895.2 putative lipoprotein 167304 8810551 HMPREF0868_1582 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475822.1 166252 R 699246 CDS YP_003475821.1 289449947 8810839 complement(167338..168276) 1 NC_013895.2 identified by match to protein family HMM PF00892; hypothetical protein 168276 8810839 HMPREF0868_1581 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475821.1 167338 R 699246 CDS YP_003475820.1 289450231 8810336 complement(168273..170993) 1 NC_013895.2 identified by match to protein family HMM PF01633; match to protein family HMM PF01636; phosphotransferase enzyme family protein 170993 8810336 HMPREF0868_1580 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphotransferase enzyme family protein YP_003475820.1 168273 R 699246 CDS YP_003475819.1 289449738 8811424 171457..171648 1 NC_013895.2 hypothetical protein 171648 8811424 HMPREF0868_1579 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475819.1 171457 D 699246 CDS YP_003475818.1 289450796 8810414 171843..178070 1 NC_013895.2 hypothetical protein 178070 8810414 HMPREF0868_1578 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475818.1 171843 D 699246 CDS YP_003475817.1 289449815 8811105 178095..179156 1 NC_013895.2 hypothetical protein 179156 8811105 HMPREF0868_1576 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475817.1 178095 D 699246 CDS YP_003475816.1 289450491 8810944 complement(179149..179370) 1 NC_013895.2 hypothetical protein 179370 8810944 HMPREF0868_1577 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475816.1 179149 R 699246 CDS YP_003475815.1 289450332 8810647 complement(179358..180152) 1 NC_013895.2 identified by match to protein family HMM PF00665; putative transposase InsK for insertion sequence IS150 180152 8810647 HMPREF0868_1575 Clostridiales genomosp. BVAB3 str. UPII9-5 putative transposase InsK for insertion sequence IS150 YP_003475815.1 179358 R 699246 CDS YP_003933622.1 308513217 8811326 complement(180176..180379) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 180379 8811326 HMPREF0868_1574 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933622.1 180176 R 699246 CDS YP_003933623.1 308513218 8810477 complement(180535..180738) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 180738 8810477 HMPREF0868_1573 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933623.1 180535 R 699246 CDS YP_003475814.1 289449876 8810481 complement(180807..181094) 1 NC_013895.2 identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385; RelE family toxin-antitoxin system toxin protein 181094 8810481 HMPREF0868_1572 Clostridiales genomosp. BVAB3 str. UPII9-5 RelE family toxin-antitoxin system toxin protein YP_003475814.1 180807 R 699246 CDS YP_003475813.1 289449880 8811151 complement(181091..181366) 1 NC_013895.2 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 181366 8811151 HMPREF0868_1571 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein YP_003475813.1 181091 R 699246 CDS YP_003933624.1 308513219 8811101 181488..181688 1 NC_013895.2 hypothetical protein 181688 8811101 HMPREF0868_1570 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933624.1 181488 D 699246 CDS YP_003475812.1 289450487 8810065 181690..181950 1 NC_013895.2 Xre family toxin-antitoxin system antitoxin protein 181950 8810065 HMPREF0868_1569 Clostridiales genomosp. BVAB3 str. UPII9-5 Xre family toxin-antitoxin system antitoxin protein YP_003475812.1 181690 D 699246 CDS YP_003475811.1 289449474 8810668 181993..182457 1 NC_013895.2 identified by match to protein family HMM PF06114; toxin-antitoxin system, toxin component domain-containing protein 182457 8810668 HMPREF0868_1568 Clostridiales genomosp. BVAB3 str. UPII9-5 toxin-antitoxin system, toxin component domain-containing protein YP_003475811.1 181993 D 699246 CDS YP_003475810.1 289450063 8811391 182558..182689 1 NC_013895.2 hypothetical protein 182689 8811391 HMPREF0868_1567 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475810.1 182558 D 699246 CDS YP_003475809.1 289450766 8810409 complement(182769..182909) 1 NC_013895.2 hypothetical protein 182909 8810409 HMPREF0868_1566 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475809.1 182769 R 699246 CDS YP_003933625.1 308513220 9829209 183281..183406 1 NC_013895.2 hypothetical protein 183406 9829209 HMPREF0868_1650 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933625.1 183281 D 699246 CDS YP_003475807.1 289450684 8811301 185321..186328 1 NC_013895.2 identified by match to protein family HMM PF03590; match to protein family HMM TIGR00669; aspartate--ammonia ligase 186328 asnA 8811301 asnA Clostridiales genomosp. BVAB3 str. UPII9-5 aspartate--ammonia ligase YP_003475807.1 185321 D 699246 CDS YP_003475806.1 289450679 8810995 186427..188232 1 NC_013895.2 identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00197; YjeF-like protein 188232 8810995 HMPREF0868_1562 Clostridiales genomosp. BVAB3 str. UPII9-5 YjeF-like protein YP_003475806.1 186427 D 699246 CDS YP_003475805.1 289450381 8810239 188365..189525 1 NC_013895.2 identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 189525 alr 8810239 alr Clostridiales genomosp. BVAB3 str. UPII9-5 alanine racemase YP_003475805.1 188365 D 699246 CDS YP_003475803.1 289450150 8810920 189673..189894 1 NC_013895.2 hypothetical protein 189894 8810920 HMPREF0868_1559 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475803.1 189673 D 699246 CDS YP_003475802.1 289450309 8810015 189956..190309 1 NC_013895.2 hypothetical protein 190309 8810015 HMPREF0868_1558 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475802.1 189956 D 699246 CDS YP_003475801.1 289449428 8811466 190408..191520 1 NC_013895.2 hypothetical protein 191520 8811466 HMPREF0868_1557 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475801.1 190408 D 699246 CDS YP_003475800.1 289450835 8810650 191785..192465 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE 192465 ftsE 8810650 ftsE Clostridiales genomosp. BVAB3 str. UPII9-5 cell division ATP-binding protein FtsE YP_003475800.1 191785 D 699246 CDS YP_003475799.1 289450045 8810312 192474..193367 1 NC_013895.2 identified by match to protein family HMM PF02687; efflux ABC transporter permease 193367 8810312 HMPREF0868_1555 Clostridiales genomosp. BVAB3 str. UPII9-5 efflux ABC transporter permease YP_003475799.1 192474 D 699246 CDS YP_003475798.1 289449715 8810563 193493..194848 1 NC_013895.2 identified by match to protein family HMM PF01551; M23 family peptidase 194848 8810563 HMPREF0868_1554 Clostridiales genomosp. BVAB3 str. UPII9-5 M23 family peptidase YP_003475798.1 193493 D 699246 CDS YP_003475797.1 289449959 8811262 195010..196413 1 NC_013895.2 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; S41 family peptidase 196413 8811262 HMPREF0868_1553 Clostridiales genomosp. BVAB3 str. UPII9-5 S41 family peptidase YP_003475797.1 195010 D 699246 CDS YP_003475796.1 289450642 8810122 196400..197260 1 NC_013895.2 identified by match to protein family HMM PF08241; methyltransferase domain-containing protein 197260 8810122 HMPREF0868_1552 Clostridiales genomosp. BVAB3 str. UPII9-5 methyltransferase domain-containing protein YP_003475796.1 196400 D 699246 CDS YP_003475795.1 289449530 8811447 197411..198379 1 NC_013895.2 identified by match to protein family HMM PF01430; chaperonin HslO 198379 hslO 8811447 hslO Clostridiales genomosp. BVAB3 str. UPII9-5 chaperonin HslO YP_003475795.1 197411 D 699246 CDS YP_003475794.1 289450817 8810166 198782..200665 1 NC_013895.2 hypothetical protein 200665 8810166 HMPREF0868_1550 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475794.1 198782 D 699246 CDS YP_003475793.1 289449574 8810969 201308..202657 1 NC_013895.2 identified by match to protein family HMM PF01512; match to protein family HMM TIGR01945; putative electron transport complex protein RnfC 202657 8810969 HMPREF0868_1549 Clostridiales genomosp. BVAB3 str. UPII9-5 putative electron transport complex protein RnfC YP_003475793.1 201308 D 699246 CDS YP_003475792.1 289450355 8810218 202661..203698 1 NC_013895.2 identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; electron transport complex, RnfABCDGE type subunit D 203698 rnfD 8810218 rnfD Clostridiales genomosp. BVAB3 str. UPII9-5 electron transport complex, RnfABCDGE type subunit D YP_003475792.1 202661 D 699246 CDS YP_003475791.1 289449625 8810775 203709..204290 1 NC_013895.2 identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; electron transport complex, RnfABCDGE type subunit G 204290 rnfG 8810775 rnfG Clostridiales genomosp. BVAB3 str. UPII9-5 electron transport complex, RnfABCDGE type subunit G YP_003475791.1 203709 D 699246 CDS YP_003475790.1 289450168 8811317 204293..205270 1 NC_013895.2 identified by match to protein family HMM PF02508; match to protein family HMM TIGR01948; electron transport complex, RnfABCDGE type subunit E 205270 rnfE 8811317 rnfE Clostridiales genomosp. BVAB3 str. UPII9-5 electron transport complex, RnfABCDGE type subunit E YP_003475790.1 204293 D 699246 CDS YP_003475789.1 289450695 8810590 205271..205864 1 NC_013895.2 identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; electron transport complex, RnfABCDGE type subunit A 205864 rnfA 8810590 rnfA Clostridiales genomosp. BVAB3 str. UPII9-5 electron transport complex, RnfABCDGE type subunit A YP_003475789.1 205271 D 699246 CDS YP_003475788.1 289449986 8811275 205878..206729 1 NC_013895.2 identified by match to protein family HMM PF00037; match to protein family HMM PF04060; match to protein family HMM TIGR01944; electron transport complex, RnfABCDGE type subunit B 206729 rnfB 8811275 rnfB Clostridiales genomosp. BVAB3 str. UPII9-5 electron transport complex, RnfABCDGE type subunit B YP_003475788.1 205878 D 699246 CDS YP_003475787.1 289450654 8810013 206967..208055 1 NC_013895.2 hypothetical protein 208055 8810013 HMPREF0868_1543 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475787.1 206967 D 699246 CDS YP_003475786.1 289449426 8811123 208140..208640 1 NC_013895.2 identified by match to protein family HMM PF05154; TM2 domain-containing protein 208640 8811123 HMPREF0868_1542 Clostridiales genomosp. BVAB3 str. UPII9-5 TM2 domain-containing protein YP_003475786.1 208140 D 699246 CDS YP_003475785.1 289450508 8810540 208955..209266 1 NC_013895.2 identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 209266 rpsJ 8810540 rpsJ Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S10 YP_003475785.1 208955 D 699246 CDS YP_003475784.1 289449936 8810051 209349..209984 1 NC_013895.2 identified by match to protein family HMM PF00297; match to protein family HMM TIGR03625; 50S ribosomal protein L3 209984 rplC 8810051 rplC Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L3 YP_003475784.1 209349 D 699246 CDS YP_003475783.1 289449461 8810488 210006..210629 1 NC_013895.2 identified by match to protein family HMM PF00573; match to protein family HMM TIGR03953; 50S ribosomal protein L4 210629 rplD 8810488 rplD Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L4 YP_003475783.1 210006 D 699246 CDS YP_003475782.1 289449887 8809946 210629..210982 1 NC_013895.2 identified by match to protein family HMM PF00276; 50S ribosomal protein L23 210982 rplW 8809946 rplW Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L23 YP_003475782.1 210629 D 699246 CDS YP_003475781.1 289449362 8810957 211008..211835 1 NC_013895.2 identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171; 50S ribosomal protein L2 211835 rplB 8810957 rplB Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L2 YP_003475781.1 211008 D 699246 CDS YP_003475780.1 289450345 8810070 211850..212128 1 NC_013895.2 identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 212128 rpsS 8810070 rpsS Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S19 YP_003475780.1 211850 D 699246 CDS YP_003475779.1 289449479 8810695 212152..212628 1 NC_013895.2 identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 212628 rplV 8810695 rplV Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L22 YP_003475779.1 212152 D 699246 CDS YP_003475778.1 289450090 8811459 212639..213307 1 NC_013895.2 identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 213307 rpsC 8811459 rpsC Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S3 YP_003475778.1 212639 D 699246 CDS YP_003475777.1 289450829 8810510 213307..213726 1 NC_013895.2 identified by match to protein family HMM PF00252; match to protein family HMM TIGR01164; 50S ribosomal protein L16 213726 rplP 8810510 rplP Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L16 YP_003475777.1 213307 D 699246 CDS YP_003475776.1 289449908 8811183 213723..213923 1 NC_013895.2 identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 213923 rpmC 8811183 rpmC Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L29 YP_003475776.1 213723 D 699246 CDS YP_003475775.1 289450566 8810303 213935..214195 1 NC_013895.2 identified by match to protein family HMM PF00366; match to protein family HMM TIGR03635; 30S ribosomal protein S17 214195 rpsQ 8810303 rpsQ Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S17 YP_003475775.1 213935 D 699246 CDS YP_003475774.1 289449706 8810956 214225..214593 1 NC_013895.2 identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 214593 rplN 8810956 rplN Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L14 YP_003475774.1 214225 D 699246 CDS YP_003475773.1 289450344 8810248 214604..214945 1 NC_013895.2 identified by match to protein family HMM PF00467; match to protein family HMM TIGR01079; 50S ribosomal protein L24 214945 rplX 8810248 rplX Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L24 YP_003475773.1 214604 D 699246 CDS YP_003475772.1 289449652 8811324 214956..215495 1 NC_013895.2 identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 215495 rplE 8811324 rplE Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L5 YP_003475772.1 214956 D 699246 CDS YP_003475771.1 289450701 8810731 215513..215698 1 NC_013895.2 identified by match to protein family HMM PF00253; 30S ribosomal protein S14p/S29e 215698 rpsN 8810731 rpsN Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S14p/S29e YP_003475771.1 215513 D 699246 CDS YP_003475770.1 289450126 8810804 215719..216114 1 NC_013895.2 identified by match to protein family HMM PF00410; 30S ribosomal protein S8 216114 rpsH 8810804 rpsH Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S8 YP_003475770.1 215719 D 699246 CDS YP_003475769.1 289450196 8810112 216166..216711 1 NC_013895.2 identified by match to protein family HMM PF00347; match to protein family HMM TIGR03654; 50S ribosomal protein L6 216711 rplF 8810112 rplF Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L6 YP_003475769.1 216166 D 699246 CDS YP_003475768.1 289449520 8811066 216727..217089 1 NC_013895.2 identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 217089 rplR 8811066 rplR Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L18 YP_003475768.1 216727 D 699246 CDS YP_003475767.1 289450452 8811225 217102..217593 1 NC_013895.2 identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 217593 rpsE 8811225 rpsE Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S5 YP_003475767.1 217102 D 699246 CDS YP_003475766.1 289450608 8810450 217605..217784 1 NC_013895.2 identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308; 50S ribosomal protein L30 217784 rpmD 8810450 rpmD Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L30 YP_003475766.1 217605 D 699246 CDS YP_003475765.1 289449849 8811141 217797..218246 1 NC_013895.2 identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 218246 rplO 8811141 rplO Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L15 YP_003475765.1 217797 D 699246 CDS YP_003475764.1 289450525 8810459 218250..219551 1 NC_013895.2 identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY 219551 secY 8810459 secY Clostridiales genomosp. BVAB3 str. UPII9-5 preprotein translocase subunit SecY YP_003475764.1 218250 D 699246 CDS YP_003475763.1 289449858 8811496 219615..220268 1 NC_013895.2 identified by match to protein family HMM PF00406; match to protein family HMM PF05191; match to protein family HMM TIGR01351; putative adenylate kinase 220268 8811496 HMPREF0868_1519 Clostridiales genomosp. BVAB3 str. UPII9-5 putative adenylate kinase YP_003475763.1 219615 D 699246 CDS YP_003475762.1 289450863 8810505 220265..221029 1 NC_013895.2 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 221029 map 8810505 map Clostridiales genomosp. BVAB3 str. UPII9-5 methionine aminopeptidase YP_003475762.1 220265 D 699246 CDS YP_003475761.1 289449903 8810205 221033..221341 1 NC_013895.2 hypothetical protein 221341 8810205 HMPREF0868_1517 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475761.1 221033 D 699246 CDS YP_003475760.1 289449612 8811042 221323..221541 1 NC_013895.2 identified by match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 221541 infA 8811042 infA Clostridiales genomosp. BVAB3 str. UPII9-5 translation initiation factor IF-1 YP_003475760.1 221323 D 699246 CDS YP_003475759.1 289450428 8809957 221692..221805 1 NC_013895.2 identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; 50S ribosomal protein L36 221805 rpmJ 8809957 rpmJ Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L36 YP_003475759.1 221692 D 699246 CDS YP_003475758.1 289449373 8810844 221918..222286 1 NC_013895.2 identified by match to protein family HMM PF00416; match to protein family HMM TIGR03631; 30S ribosomal protein S13 222286 rpsM 8810844 rpsM Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S13 YP_003475758.1 221918 D 699246 CDS YP_003475757.1 289450236 8810542 222300..222701 1 NC_013895.2 identified by match to protein family HMM PF00411; match to protein family HMM TIGR03632; 30S ribosomal protein S11 222701 rpsK 8810542 rpsK Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S11 YP_003475757.1 222300 D 699246 CDS YP_003475756.1 289449938 8811455 222761..223726 1 NC_013895.2 identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha 223726 rpoA 8811455 rpoA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-directed RNA polymerase subunit alpha YP_003475756.1 222761 D 699246 CDS YP_003475755.1 289450825 8810482 223759..224280 1 NC_013895.2 identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 224280 rplQ 8810482 rplQ Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L17 YP_003475755.1 223759 D 699246 CDS YP_003475754.1 289449881 8811136 224354..226219 1 NC_013895.2 identified by match to protein family HMM PF00005; cobalt ABC transporter ATP-binding protein 226219 8811136 HMPREF0868_1510 Clostridiales genomosp. BVAB3 str. UPII9-5 cobalt ABC transporter ATP-binding protein YP_003475754.1 224354 D 699246 CDS YP_003475753.1 289450520 8810422 226200..227009 1 NC_013895.2 identified by match to protein family HMM PF02361; cobalt transport protein 227009 8810422 HMPREF0868_1509 Clostridiales genomosp. BVAB3 str. UPII9-5 cobalt transport protein YP_003475753.1 226200 D 699246 CDS YP_003475752.1 289449823 8811409 227073..227897 1 NC_013895.2 identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 227897 truA 8811409 truA Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA pseudouridine synthase A YP_003475752.1 227073 D 699246 CDS YP_003475751.1 289450784 8810342 227864..229321 1 NC_013895.2 identified by match to protein family HMM PF04095; match to protein family HMM TIGR01513; nicotinate phosphoribosyltransferase 229321 pncB 8810342 pncB Clostridiales genomosp. BVAB3 str. UPII9-5 nicotinate phosphoribosyltransferase YP_003475751.1 227864 D 699246 CDS YP_003475750.1 289449744 8811080 229403..229918 1 NC_013895.2 identified by match to protein family HMM PF00160; putative peptidyl-prolyl cis-trans isomerase B 229918 8811080 HMPREF0868_1506 Clostridiales genomosp. BVAB3 str. UPII9-5 putative peptidyl-prolyl cis-trans isomerase B YP_003475750.1 229403 D 699246 CDS YP_003475749.1 289450466 8810197 229974..231992 1 NC_013895.2 identified by match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399; methionine--tRNA ligase 231992 metG 8810197 metG Clostridiales genomosp. BVAB3 str. UPII9-5 methionine--tRNA ligase YP_003475749.1 229974 D 699246 CDS YP_003475748.1 289449604 8810875 231992..232852 1 NC_013895.2 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 232852 8810875 HMPREF0868_1504 Clostridiales genomosp. BVAB3 str. UPII9-5 TatD family hydrolase YP_003475748.1 231992 D 699246 CDS YP_003475747.1 289450266 8810028 232897..233913 1 NC_013895.2 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 233913 galE 8810028 galE Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-glucose 4-epimerase YP_003475747.1 232897 D 699246 CDS YP_003475746.1 289449439 8811540 234058..234900 1 NC_013895.2 hypothetical protein 234900 8811540 HMPREF0868_1502 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475746.1 234058 D 699246 CDS YP_003475745.1 289450188 8810114 235367..235507 1 NC_013895.2 hypothetical protein 235507 8810114 HMPREF0868_1498 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475745.1 235367 D 699246 CDS YP_003475744.1 289449522 8810589 235691..236161 1 NC_013895.2 hypothetical protein 236161 8810589 HMPREF0868_1497 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475744.1 235691 D 699246 CDS YP_003475743.1 289449985 8811448 236179..236523 1 NC_013895.2 hypothetical protein 236523 8811448 HMPREF0868_1496 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475743.1 236179 D 699246 CDS YP_003475742.1 289450818 8811114 236520..237062 1 NC_013895.2 hypothetical protein 237062 8811114 HMPREF0868_1495 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475742.1 236520 D 699246 CDS YP_003475741.1 289450499 8810244 237157..237321 1 NC_013895.2 hypothetical protein 237321 8810244 HMPREF0868_1494 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475741.1 237157 D 699246 CDS YP_003475740.1 289449648 8810361 237377..238441 1 NC_013895.2 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; type I glyceraldehyde-3-phosphate dehydrogenase 238441 gap 8810361 gap Clostridiales genomosp. BVAB3 str. UPII9-5 type I glyceraldehyde-3-phosphate dehydrogenase YP_003475740.1 237377 D 699246 CDS YP_003475739.1 289449763 8811263 238458..238571 1 NC_013895.2 hypothetical protein 238571 8811263 HMPREF0868_1492 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475739.1 238458 D 699246 CDS YP_003475738.1 289450643 8810607 238591..239832 1 NC_013895.2 identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 239832 8810607 HMPREF0868_1491 Clostridiales genomosp. BVAB3 str. UPII9-5 Ser/Thr phosphatase family protein YP_003475738.1 238591 D 699246 CDS YP_003475737.1 289450003 8811215 239869..243183 1 NC_013895.2 hypothetical protein 243183 8811215 HMPREF0868_1490 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475737.1 239869 D 699246 CDS YP_003475736.1 289450598 8809961 complement(243204..243716) 1 NC_013895.2 identified by match to protein family HMM PF06114; putative toxin-antitoxin system toxin component 243716 8809961 HMPREF0868_1489 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system toxin component YP_003475736.1 243204 R 699246 CDS YP_003475735.1 289449377 8811388 complement(243713..244099) 1 NC_013895.2 identified by match to protein family HMM PF01381; Xre family toxin-antitoxin system antitoxin protein 244099 8811388 HMPREF0868_1488 Clostridiales genomosp. BVAB3 str. UPII9-5 Xre family toxin-antitoxin system antitoxin protein YP_003475735.1 243713 R 699246 CDS YP_003475734.1 289450763 8810104 244210..245424 1 NC_013895.2 identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein 245424 8810104 HMPREF0868_1487 Clostridiales genomosp. BVAB3 str. UPII9-5 ImpB/MucB/SamB family protein YP_003475734.1 244210 D 699246 CDS YP_003475733.1 289449512 8810792 245506..246384 1 NC_013895.2 identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein 246384 8810792 HMPREF0868_1486 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475733.1 245506 D 699246 CDS YP_003475732.1 289450185 8810568 246413..246661 1 NC_013895.2 identified by match to protein family HMM PF04025; hypothetical protein 246661 8810568 HMPREF0868_1485 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475732.1 246413 D 699246 CDS YP_003475731.1 289449964 8811454 246664..247284 1 NC_013895.2 identified by match to protein family HMM PF00625; match to protein family HMM TIGR03263; guanylate kinase 247284 gmk 8811454 gmk Clostridiales genomosp. BVAB3 str. UPII9-5 guanylate kinase YP_003475731.1 246664 D 699246 CDS YP_003475730.1 289450824 8810740 247346..247849 1 NC_013895.2 identified by match to protein family HMM PF01192; match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega 247849 rpoZ 8810740 rpoZ Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-directed RNA polymerase subunit omega YP_003475730.1 247346 D 699246 CDS YP_003475729.1 289450135 8810073 247852..249240 1 NC_013895.2 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00389; glycine--tRNA ligase 249240 glyS 8810073 glyS Clostridiales genomosp. BVAB3 str. UPII9-5 glycine--tRNA ligase YP_003475729.1 247852 D 699246 CDS YP_003475728.1 289449482 8810453 249320..251944 1 NC_013895.2 identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01828; pyruvate, phosphate dikinase 251944 ppdK 8810453 ppdK Clostridiales genomosp. BVAB3 str. UPII9-5 pyruvate, phosphate dikinase YP_003475728.1 249320 D 699246 CDS YP_003475727.1 289449852 8810185 252019..253464 1 NC_013895.2 identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD dependent oxidoreductase 253464 8810185 HMPREF0868_1480 Clostridiales genomosp. BVAB3 str. UPII9-5 FAD dependent oxidoreductase YP_003475727.1 252019 D 699246 CDS YP_003475726.1 289449592 8811353 253457..254791 1 NC_013895.2 identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 254791 8811353 HMPREF0868_1479 Clostridiales genomosp. BVAB3 str. UPII9-5 pyridine nucleotide-disulfide oxidoreductase YP_003475726.1 253457 D 699246 CDS YP_003475725.1 289450729 8811564 254784..255164 1 NC_013895.2 identified by match to protein family HMM PF07892; hypothetical protein 255164 8811564 HMPREF0868_1478 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475725.1 254784 D 699246 CDS YP_003475724.1 289450167 8810083 260733..262187 1 NC_013895.2 hypothetical protein 262187 8810083 HMPREF0868_1471 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475724.1 260733 D 699246 CDS YP_003475723.1 289449492 8810427 262250..262429 1 NC_013895.2 hypothetical protein 262429 8810427 HMPREF0868_1470 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475723.1 262250 D 699246 CDS YP_003475722.1 289449828 8811126 262453..264054 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 264054 8811126 HMPREF0868_1469 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003475722.1 262453 D 699246 CDS YP_003475721.1 289450511 8810186 264163..266097 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; putative phosphonate C-P lyase system protein PhnK 266097 8810186 HMPREF0868_1468 Clostridiales genomosp. BVAB3 str. UPII9-5 putative phosphonate C-P lyase system protein PhnK YP_003475721.1 264163 D 699246 CDS YP_003475720.1 289449593 8810816 266090..267217 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 267217 8810816 HMPREF0868_1467 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475720.1 266090 D 699246 CDS YP_003475719.1 289450208 8810815 267210..268136 1 NC_013895.2 identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter permease OppC 268136 8810815 HMPREF0868_1466 Clostridiales genomosp. BVAB3 str. UPII9-5 putative oligopeptide ABC transporter permease OppC YP_003475719.1 267210 D 699246 CDS YP_003475718.1 289450207 8811333 complement(268169..268822) 1 NC_013895.2 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase 268822 ung 8811333 ung Clostridiales genomosp. BVAB3 str. UPII9-5 uracil-DNA glycosylase YP_003475718.1 268169 R 699246 CDS YP_003475717.1 289450709 8810451 268821..269000 1 NC_013895.2 hypothetical protein 269000 8810451 HMPREF0868_1464 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475717.1 268821 D 699246 CDS YP_003475716.1 289449850 8811147 complement(269017..270447) 1 NC_013895.2 identified by match to protein family HMM PF00324; amino acid permease 270447 8811147 HMPREF0868_1463 Clostridiales genomosp. BVAB3 str. UPII9-5 amino acid permease YP_003475716.1 269017 R 699246 CDS YP_003475715.1 289450531 8811193 complement(270800..271630) 1 NC_013895.2 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase/reductase family oxidoreductase 271630 8811193 HMPREF0868_1462 Clostridiales genomosp. BVAB3 str. UPII9-5 short chain dehydrogenase/reductase family oxidoreductase YP_003475715.1 270800 R 699246 CDS YP_003475714.1 289450576 8810313 complement(271808..273163) 1 NC_013895.2 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 273163 8810313 HMPREF0868_1461 Clostridiales genomosp. BVAB3 str. UPII9-5 MATE efflux family protein YP_003475714.1 271808 R 699246 CDS YP_003475713.1 289449716 8811002 complement(273456..274805) 1 NC_013895.2 identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 274805 brnQ 8811002 brnQ Clostridiales genomosp. BVAB3 str. UPII9-5 branched-chain amino acid transport system II carrier protein YP_003475713.1 273456 R 699246 CDS YP_003475712.2 308513221 8810127 275139..276269 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF09383; ABC transporter ATP-binding protein 276269 8810127 HMPREF0868_1459 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475712.2 275139 D 699246 CDS YP_003475711.1 289449535 8810048 276256..276912 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 276912 8810048 HMPREF0868_1458 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475711.1 276256 D 699246 CDS YP_003475710.1 289449458 8810747 276933..277769 1 NC_013895.2 identified by match to protein family HMM PF03180; NLPA lipoprotein 277769 8810747 HMPREF0868_1457 Clostridiales genomosp. BVAB3 str. UPII9-5 NLPA lipoprotein YP_003475710.1 276933 D 699246 CDS YP_003475709.1 289450142 8811489 278020..278628 1 NC_013895.2 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1 family protein 278628 8811489 HMPREF0868_1456 Clostridiales genomosp. BVAB3 str. UPII9-5 DJ-1 family protein YP_003475709.1 278020 D 699246 CDS YP_003475707.1 289449998 8810458 278886..279686 1 NC_013895.2 identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 279686 8810458 HMPREF0868_1454 Clostridiales genomosp. BVAB3 str. UPII9-5 cyclic nucleotide-binding domain-containing protein YP_003475707.1 278886 D 699246 CDS YP_003475706.1 289449857 8810950 279670..281238 1 NC_013895.2 identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein 281238 8810950 HMPREF0868_1453 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475706.1 279670 D 699246 CDS YP_003475705.1 289450338 8810026 281252..282610 1 NC_013895.2 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase 282610 glmM 8810026 glmM Clostridiales genomosp. BVAB3 str. UPII9-5 phosphoglucosamine mutase YP_003475705.1 281252 D 699246 CDS YP_003475704.1 289449437 8810883 282692..283921 1 NC_013895.2 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 283921 8810883 HMPREF0868_1451 Clostridiales genomosp. BVAB3 str. UPII9-5 N-acetylmuramoyl-L-alanine amidase YP_003475704.1 282692 D 699246 CDS YP_003475703.1 289450272 8810512 284004..284864 1 NC_013895.2 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 284864 8810512 HMPREF0868_1450 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003475703.1 284004 D 699246 CDS YP_003475702.1 289449910 8810296 284904..285713 1 NC_013895.2 identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 285713 rpiA 8810296 rpiA Clostridiales genomosp. BVAB3 str. UPII9-5 ribose 5-phosphate isomerase A YP_003475702.1 284904 D 699246 CDS YP_003475701.1 289449700 8810817 285752..286591 1 NC_013895.2 identified by match to protein family HMM PF00725; match to protein family HMM PF02737; putative 3-hydroxybutyryl-CoA dehydrogenase 286591 8810817 HMPREF0868_1448 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 3-hydroxybutyryl-CoA dehydrogenase YP_003475701.1 285752 D 699246 CDS YP_003475700.1 289450209 8810095 286593..287081 1 NC_013895.2 hypothetical protein 287081 8810095 HMPREF0868_1447 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475700.1 286593 D 699246 CDS YP_003475699.1 289449504 8811402 287078..287623 1 NC_013895.2 putative heptaprenyl diphosphate synthase component I 287623 8811402 HMPREF0868_1446 Clostridiales genomosp. BVAB3 str. UPII9-5 putative heptaprenyl diphosphate synthase component I YP_003475699.1 287078 D 699246 CDS YP_003475698.1 289450777 8810709 287770..288714 1 NC_013895.2 hypothetical protein 288714 8810709 HMPREF0868_1445 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475698.1 287770 D 699246 CDS YP_003475697.1 289450104 8811227 288952..290238 1 NC_013895.2 putative lipoprotein 290238 8811227 HMPREF0868_1444 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475697.1 288952 D 699246 CDS YP_003475696.1 289450610 8810529 complement(290326..292848) 1 NC_013895.2 hypothetical protein 292848 8810529 HMPREF0868_1443 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475696.1 290326 R 699246 CDS YP_003475695.1 289449926 8811154 complement(292850..293827) 1 NC_013895.2 identified by match to protein family HMM PF00535; putative bactoprenol glucosyl transferase-like protein 293827 8811154 HMPREF0868_1442 Clostridiales genomosp. BVAB3 str. UPII9-5 putative bactoprenol glucosyl transferase-like protein YP_003475695.1 292850 R 699246 CDS YP_003475694.1 289450537 8810385 293954..294526 1 NC_013895.2 identified by match to protein family HMM PF00857; isochorismatase family protein 294526 8810385 HMPREF0868_1441 Clostridiales genomosp. BVAB3 str. UPII9-5 isochorismatase family protein YP_003475694.1 293954 D 699246 CDS YP_003475693.1 289449787 8810351 294523..297363 1 NC_013895.2 identified by match to protein family HMM PF00590; putative porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein 297363 8810351 HMPREF0868_1440 Clostridiales genomosp. BVAB3 str. UPII9-5 putative porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein YP_003475693.1 294523 D 699246 CDS YP_003475692.1 289449753 8811299 297416..298024 1 NC_013895.2 identified by match to protein family HMM PF01817; chorismate mutase 298024 8811299 HMPREF0868_1439 Clostridiales genomosp. BVAB3 str. UPII9-5 chorismate mutase YP_003475692.1 297416 D 699246 CDS YP_003475691.1 289450677 8810541 298003..298737 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 298737 8810541 HMPREF0868_1438 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475691.1 298003 D 699246 CDS YP_003475690.1 289449937 8811435 298789..300519 1 NC_013895.2 hypothetical protein 300519 8811435 HMPREF0868_1437 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475690.1 298789 D 699246 CDS YP_003475689.1 289450807 8810002 300543..300677 1 NC_013895.2 hypothetical protein 300677 8810002 HMPREF0868_1436 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475689.1 300543 D 699246 CDS YP_003475688.1 289449415 8810903 300779..301102 1 NC_013895.2 hypothetical protein 301102 8810903 HMPREF0868_1435 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475688.1 300779 D 699246 CDS YP_003475687.1 289450292 8809967 301089..303125 1 NC_013895.2 identified by match to protein family HMM PF01496; V-type ATPase 116kDa subunit family protein 303125 8809967 HMPREF0868_1434 Clostridiales genomosp. BVAB3 str. UPII9-5 V-type ATPase 116kDa subunit family protein YP_003475687.1 301089 D 699246 CDS YP_003475686.1 289449382 8810871 303217..303717 1 NC_013895.2 identified by match to protein family HMM PF00137; V-type sodium ATPase subunit K 303717 8810871 HMPREF0868_1433 Clostridiales genomosp. BVAB3 str. UPII9-5 V-type sodium ATPase subunit K YP_003475686.1 303217 D 699246 CDS YP_003475685.1 289450262 8810102 303723..304325 1 NC_013895.2 identified by match to protein family HMM PF01991; hypothetical protein 304325 8810102 HMPREF0868_1432 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475685.1 303723 D 699246 CDS YP_003475684.1 289449510 8810770 304331..305515 1 NC_013895.2 hypothetical protein 305515 8810770 HMPREF0868_1431 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475684.1 304331 D 699246 CDS YP_003475683.1 289450163 8810720 305508..305849 1 NC_013895.2 identified by match to protein family HMM PF01990; hypothetical protein 305849 8810720 HMPREF0868_1430 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475683.1 305508 D 699246 CDS YP_003475682.1 289450115 8811389 305883..307664 1 NC_013895.2 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; ATP synthase ab C-terminal domain-containing protein 307664 8811389 HMPREF0868_1429 Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase ab C-terminal domain-containing protein YP_003475682.1 305883 D 699246 CDS YP_003475681.1 289450764 8810849 307675..309066 1 NC_013895.2 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; ATP synthase ab C-terminal domain-containing protein 309066 8810849 HMPREF0868_1428 Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase ab C-terminal domain-containing protein YP_003475681.1 307675 D 699246 CDS YP_003475680.1 289450241 8810016 309080..309784 1 NC_013895.2 identified by match to protein family HMM PF01813; match to protein family HMM TIGR00309; V-type ATPase subunit D 309784 8810016 HMPREF0868_1427 Clostridiales genomosp. BVAB3 str. UPII9-5 V-type ATPase subunit D YP_003475680.1 309080 D 699246 CDS YP_003475679.1 289449429 8811169 310038..313160 1 NC_013895.2 hypothetical protein 313160 8811169 HMPREF0868_1426 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475679.1 310038 D 699246 CDS YP_003475678.1 289450552 8810191 complement(313161..316484) 1 NC_013895.2 identified by match to protein family HMM PF00176; match to protein family HMM PF00271; SNF2 family N-terminal domain-containing protein 316484 8810191 HMPREF0868_1425 Clostridiales genomosp. BVAB3 str. UPII9-5 SNF2 family N-terminal domain-containing protein YP_003475678.1 313161 R 699246 CDS YP_003475677.1 289449598 8811328 316483..317106 1 NC_013895.2 hypothetical protein 317106 8811328 HMPREF0868_1424 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475677.1 316483 D 699246 CDS YP_003475676.1 289450704 8810616 317151..317300 1 NC_013895.2 hypothetical protein 317300 8810616 HMPREF0868_1423 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475676.1 317151 D 699246 CDS YP_003475675.1 289450012 8811469 complement(317501..317632) 1 NC_013895.2 hypothetical protein 317632 8811469 HMPREF0868_1422 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475675.1 317501 R 699246 CDS YP_003475674.1 289450838 8810753 317778..318164 1 NC_013895.2 hypothetical protein 318164 8810753 HMPREF0868_1421 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475674.1 317778 D 699246 CDS YP_003933626.1 308513222 8810763 318509..319384 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00497; family 3 extracellular solute-binding protein 319384 8810763 HMPREF0868_1419 Clostridiales genomosp. BVAB3 str. UPII9-5 family 3 extracellular solute-binding protein YP_003933626.1 318509 D 699246 CDS YP_003475673.1 289450156 8810086 319501..321243 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter ATP-binding protein 321243 8810086 HMPREF0868_1418 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475673.1 319501 D 699246 CDS YP_003475672.1 289449495 8811415 321357..321563 1 NC_013895.2 identified by match to protein family HMM TIGR03980; hydrid cluster protein-associated redox disulfide domain-containing protein 321563 8811415 HMPREF0868_1417 Clostridiales genomosp. BVAB3 str. UPII9-5 hydrid cluster protein-associated redox disulfide domain-containing protein YP_003475672.1 321357 D 699246 CDS YP_003475671.1 289450788 8810352 321567..322250 1 NC_013895.2 identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 322250 8810352 HMPREF0868_1416 Clostridiales genomosp. BVAB3 str. UPII9-5 GntR family transcriptional regulator YP_003475671.1 321567 D 699246 CDS YP_003475670.1 289449754 8811244 322390..323766 1 NC_013895.2 identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 323766 8811244 HMPREF0868_1415 Clostridiales genomosp. BVAB3 str. UPII9-5 pyridine nucleotide-disulfide oxidoreductase YP_003475670.1 322390 D 699246 CDS YP_003475669.1 289450625 8810972 323807..324370 1 NC_013895.2 identified by match to protein family HMM TIGR02359; protein ThiW 324370 thiW 8810972 thiW Clostridiales genomosp. BVAB3 str. UPII9-5 protein ThiW YP_003475669.1 323807 D 699246 CDS YP_003475668.2 308513223 8810424 324345..325238 1 NC_013895.2 identified by match to protein family HMM PF02110; putative hydroxyethylthiazole kinase 325238 8810424 HMPREF0868_1413 Clostridiales genomosp. BVAB3 str. UPII9-5 putative hydroxyethylthiazole kinase YP_003475668.2 324345 D 699246 CDS YP_003475667.1 289449825 8810585 325267..325902 1 NC_013895.2 identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase 325902 thiE 8810585 thiE Clostridiales genomosp. BVAB3 str. UPII9-5 thiamine-phosphate diphosphorylase YP_003475667.1 325267 D 699246 CDS YP_003475666.1 289449981 8810772 326686..327264 1 NC_013895.2 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 327264 8810772 HMPREF0868_1411 Clostridiales genomosp. BVAB3 str. UPII9-5 TetR family transcriptional regulator YP_003475666.1 326686 D 699246 CDS YP_003475665.1 289450165 8810354 327385..329145 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 329145 8810354 HMPREF0868_1410 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475665.1 327385 D 699246 CDS YP_003475664.1 289449756 8810199 329123..330841 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 330841 8810199 HMPREF0868_1409 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475664.1 329123 D 699246 CDS YP_003475663.1 289449606 8811109 330880..331473 1 NC_013895.2 identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein 331473 8811109 HMPREF0868_1408 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475663.1 330880 D 699246 CDS YP_003475662.1 289450495 8811222 331473..332153 1 NC_013895.2 identified by match to protein family HMM PF02361; cobalt transport protein 332153 8811222 HMPREF0868_1407 Clostridiales genomosp. BVAB3 str. UPII9-5 cobalt transport protein YP_003475662.1 331473 D 699246 CDS YP_003475661.1 289450605 8811543 332150..333544 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 333544 8811543 HMPREF0868_1406 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475661.1 332150 D 699246 CDS YP_003475660.1 289449562 8810896 complement(333985..336498) 1 NC_013895.2 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucine--tRNA ligase 336498 leuS 8810896 leuS Clostridiales genomosp. BVAB3 str. UPII9-5 leucine--tRNA ligase YP_003475660.1 333985 R 699246 CDS YP_003475659.1 289450285 8810865 complement(336592..337422) 1 NC_013895.2 identified by match to protein family HMM PF05857; protein TraX 337422 traX 8810865 traX Clostridiales genomosp. BVAB3 str. UPII9-5 protein TraX YP_003475659.1 336592 R 699246 CDS YP_003475658.1 289450256 8809968 337646..338644 1 NC_013895.2 identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; cell division protein FtsA 338644 ftsA 8809968 ftsA Clostridiales genomosp. BVAB3 str. UPII9-5 cell division protein FtsA YP_003475658.1 337646 D 699246 CDS YP_003475657.1 289449383 8811176 338843..341212 1 NC_013895.2 identified by match to protein family HMM PF00006; match to protein family HMM PF02178; match to protein family HMM PF07497; match to protein family HMM TIGR00767; transcription termination factor Rho 341212 rho 8811176 rho Clostridiales genomosp. BVAB3 str. UPII9-5 transcription termination factor Rho YP_003475657.1 338843 D 699246 CDS YP_003475656.1 289450559 8810496 341339..341539 1 NC_013895.2 identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 341539 rpmE 8810496 rpmE Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L31 YP_003475656.1 341339 D 699246 CDS YP_003475655.1 289449895 8811208 341624..342721 1 NC_013895.2 identified by match to protein family HMM PF07136; hypothetical protein 342721 8811208 HMPREF0868_1398 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475655.1 341624 D 699246 CDS YP_003475654.1 289450591 8811021 342699..343655 1 NC_013895.2 identified by match to protein family HMM TIGR00536; methyltransferase, HemK family 343655 8811021 HMPREF0868_1397 Clostridiales genomosp. BVAB3 str. UPII9-5 methyltransferase, HemK family YP_003475654.1 342699 D 699246 CDS YP_003475653.1 289450407 8810846 343676..344776 1 NC_013895.2 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 344776 prfA 8810846 prfA Clostridiales genomosp. BVAB3 str. UPII9-5 peptide chain release factor 1 YP_003475653.1 343676 D 699246 CDS YP_003475652.1 289450238 8810730 344760..345971 1 NC_013895.2 identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 345971 8810730 HMPREF0868_1395 Clostridiales genomosp. BVAB3 str. UPII9-5 Sua5/YciO/YrdC/YwlC family protein YP_003475652.1 344760 D 699246 CDS YP_003475651.1 289450125 8811418 345991..346440 1 NC_013895.2 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 346440 8811418 HMPREF0868_1394 Clostridiales genomosp. BVAB3 str. UPII9-5 low molecular weight phosphotyrosine protein phosphatase YP_003475651.1 345991 D 699246 CDS YP_003475650.1 289450790 8810582 346768..347358 1 NC_013895.2 hypothetical protein 347358 8810582 HMPREF0868_1393 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475650.1 346768 D 699246 CDS YP_003475649.1 289449978 8810305 347360..348274 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 348274 8810305 HMPREF0868_1392 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475649.1 347360 D 699246 CDS YP_003475648.1 289449708 8810998 348267..349820 1 NC_013895.2 hypothetical protein 349820 8810998 HMPREF0868_1391 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475648.1 348267 D 699246 CDS YP_003475647.1 289450384 8810914 350056..355389 1 NC_013895.2 identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; hypothetical protein 355389 8810914 HMPREF0868_1390 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475647.1 350056 D 699246 CDS YP_003475646.1 289450303 8810005 355471..355599 1 NC_013895.2 hypothetical protein 355599 8810005 HMPREF0868_1389 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475646.1 355471 D 699246 CDS YP_003475645.1 289449418 8810441 355676..356974 1 NC_013895.2 hypothetical protein 356974 8810441 HMPREF0868_1388 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475645.1 355676 D 699246 CDS YP_003475644.1 289449840 8811400 357051..357827 1 NC_013895.2 identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 357827 trmB 8811400 trmB Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA (guanine-N(7)-)-methyltransferase YP_003475644.1 357051 D 699246 CDS YP_003475643.1 289450775 8811221 358027..358311 1 NC_013895.2 identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 358311 rpsF 8811221 rpsF Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S6 YP_003475643.1 358027 D 699246 CDS YP_003475642.1 289450604 8810513 358328..358846 1 NC_013895.2 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding family protein 358846 8810513 HMPREF0868_1385 Clostridiales genomosp. BVAB3 str. UPII9-5 single-strand binding family protein YP_003475642.1 358328 D 699246 CDS YP_003475641.1 289449911 8809993 358879..359151 1 NC_013895.2 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 359151 rpsR 8809993 rpsR Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S18 YP_003475641.1 358879 D 699246 CDS YP_003475640.1 289449407 8810719 359334..360482 1 NC_013895.2 putative lipoprotein 360482 8810719 HMPREF0868_1383 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475640.1 359334 D 699246 CDS YP_003475639.1 289450114 8811104 360554..361435 1 NC_013895.2 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 361435 8811104 HMPREF0868_1382 Clostridiales genomosp. BVAB3 str. UPII9-5 LysR substrate binding domain-containing protein YP_003475639.1 360554 D 699246 CDS YP_003475638.1 289450490 8810217 complement(361460..362143) 1 NC_013895.2 identified by match to protein family HMM PF01553; acyltransferase 362143 8810217 HMPREF0868_1381 Clostridiales genomosp. BVAB3 str. UPII9-5 acyltransferase YP_003475638.1 361460 R 699246 CDS YP_003475637.1 289449624 8810901 362320..365886 1 NC_013895.2 hypothetical protein 365886 8810901 HMPREF0868_1380 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475637.1 362320 D 699246 CDS YP_003475636.1 289450290 8811249 365876..370222 1 NC_013895.2 identified by match to protein family HMM PF00580; putative ATP-dependent nuclease subunit A 370222 8811249 HMPREF0868_1379 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ATP-dependent nuclease subunit A YP_003475636.1 365876 D 699246 CDS YP_003475635.1 289450630 8809947 370276..371835 1 NC_013895.2 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, FGGY family protein 371835 8809947 HMPREF0868_1378 Clostridiales genomosp. BVAB3 str. UPII9-5 carbohydrate kinase, FGGY family protein YP_003475635.1 370276 D 699246 CDS YP_003475634.1 289449363 8811118 372119..372577 1 NC_013895.2 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 372577 8811118 HMPREF0868_1377 Clostridiales genomosp. BVAB3 str. UPII9-5 MarR family transcriptional regulator YP_003475634.1 372119 D 699246 CDS YP_003475633.1 289450503 8809975 372710..372877 1 NC_013895.2 hypothetical protein 372877 8809975 HMPREF0868_1376 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475633.1 372710 D 699246 CDS YP_003475632.1 289449389 8810814 372951..373238 1 NC_013895.2 hypothetical protein 373238 8810814 HMPREF0868_1375 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475632.1 372951 D 699246 CDS YP_003475631.1 289450206 8810099 complement(373269..376511) 1 NC_013895.2 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; HsdR family type I site-specific deoxyribonuclease 376511 8810099 HMPREF0868_1374 Clostridiales genomosp. BVAB3 str. UPII9-5 HsdR family type I site-specific deoxyribonuclease YP_003475631.1 373269 R 699246 CDS YP_003933627.1 308513224 8810618 complement(376534..377031) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 377031 8810618 HMPREF0868_1373 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933627.1 376534 R 699246 CDS YP_003475630.1 289450014 8811500 complement(377148..378449) 1 NC_013895.2 identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein 378449 8811500 HMPREF0868_1372 Clostridiales genomosp. BVAB3 str. UPII9-5 type I restriction modification DNA specificity domain-containing protein YP_003475630.1 377148 R 699246 CDS YP_003475629.1 289450867 8810430 complement(378446..379537) 1 NC_013895.2 hypothetical protein 379537 8810430 HMPREF0868_1371 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475629.1 378446 R 699246 CDS YP_003475628.1 289449831 8811522 complement(379537..381105) 1 NC_013895.2 identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system subunit M 381105 hsdM 8811522 hsdM Clostridiales genomosp. BVAB3 str. UPII9-5 type I restriction-modification system subunit M YP_003475628.1 379537 R 699246 CDS YP_003933628.1 308513225 9829211 complement(381823..382200) 1 NC_013895.2 hypothetical protein 382200 9829211 HMPREF0868_1652 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933628.1 381823 R 699246 CDS YP_003475627.1 289450219 8811339 382244..382522 1 NC_013895.2 hypothetical protein 382522 8811339 HMPREF0868_1367 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475627.1 382244 D 699246 CDS YP_003475626.1 289450715 8810465 382960..384354 1 NC_013895.2 hypothetical protein 384354 8810465 HMPREF0868_1366 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475626.1 382960 D 699246 CDS YP_003475625.1 289449864 8810939 384478..385203 1 NC_013895.2 hypothetical protein 385203 8810939 HMPREF0868_1365 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475625.1 384478 D 699246 CDS YP_003475624.1 289450327 8810633 385288..385935 1 NC_013895.2 identified by match to protein family HMM PF01569; PAP2 family protein 385935 8810633 HMPREF0868_1364 Clostridiales genomosp. BVAB3 str. UPII9-5 PAP2 family protein YP_003475624.1 385288 D 699246 CDS YP_003475623.1 289450029 8810118 complement(386242..387165) 1 NC_013895.2 identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; putative thioredoxin-disulfide reductase 387165 8810118 HMPREF0868_1363 Clostridiales genomosp. BVAB3 str. UPII9-5 putative thioredoxin-disulfide reductase YP_003475623.1 386242 R 699246 CDS YP_003475622.1 289449526 8811039 complement(387445..388719) 1 NC_013895.2 hypothetical protein 388719 8811039 HMPREF0868_1362 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475622.1 387445 R 699246 CDS YP_003475621.1 289450425 8810176 complement(388716..390326) 1 NC_013895.2 hypothetical protein 390326 8810176 HMPREF0868_1361 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475621.1 388716 R 699246 CDS YP_003475620.1 289449583 8811283 complement(390339..390935) 1 NC_013895.2 identified by match to protein family HMM PF01475; Fur family transcriptional regulator 390935 8811283 HMPREF0868_1360 Clostridiales genomosp. BVAB3 str. UPII9-5 Fur family transcriptional regulator YP_003475620.1 390339 R 699246 CDS YP_003475619.1 289450661 8810221 complement(390950..391807) 1 NC_013895.2 identified by match to protein family HMM PF00950; ABC 3 transport family protein 391807 8810221 HMPREF0868_1359 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC 3 transport family protein YP_003475619.1 390950 R 699246 CDS YP_003475618.1 289449627 8811094 complement(391807..392781) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 392781 8811094 HMPREF0868_1358 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475618.1 391807 R 699246 CDS YP_003475617.1 289450480 8809987 complement(392768..394372) 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 394372 prfC 8809987 prfC Clostridiales genomosp. BVAB3 str. UPII9-5 peptide chain release factor 3 YP_003475617.1 392768 R 699246 CDS YP_003475616.1 289449401 8810791 394566..395201 1 NC_013895.2 hypothetical protein 395201 8810791 HMPREF0868_1356 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475616.1 394566 D 699246 CDS YP_003475615.1 289450184 8810173 395323..396048 1 NC_013895.2 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; YebC/PmpR family DNA-binding regulatory protein 396048 8810173 HMPREF0868_1355 Clostridiales genomosp. BVAB3 str. UPII9-5 YebC/PmpR family DNA-binding regulatory protein YP_003475615.1 395323 D 699246 CDS YP_003475614.1 289449580 8811396 396091..397308 1 NC_013895.2 hypothetical protein 397308 8811396 HMPREF0868_1354 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475614.1 396091 D 699246 CDS YP_003475613.1 289450771 8809972 397301..397699 1 NC_013895.2 hypothetical protein 397699 8809972 HMPREF0868_1353 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475613.1 397301 D 699246 CDS YP_003475612.1 289449386 8811146 397699..398043 1 NC_013895.2 hypothetical protein 398043 8811146 HMPREF0868_1352 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475612.1 397699 D 699246 CDS YP_003475611.1 289450530 8810661 complement(398085..398930) 1 NC_013895.2 identified by match to protein family HMM PF02683; cytochrome C biogenesis protein transmembrane region 398930 8810661 HMPREF0868_1351 Clostridiales genomosp. BVAB3 str. UPII9-5 cytochrome C biogenesis protein transmembrane region YP_003475611.1 398085 R 699246 CDS YP_003475610.1 289450056 8810156 complement(398930..399553) 1 NC_013895.2 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 399553 8810156 HMPREF0868_1350 Clostridiales genomosp. BVAB3 str. UPII9-5 AhpC/TSA family antioxidant YP_003475610.1 398930 R 699246 CDS YP_003475609.1 289449564 8811097 complement(399614..399928) 1 NC_013895.2 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 399928 trxA 8811097 trxA Clostridiales genomosp. BVAB3 str. UPII9-5 thioredoxin YP_003475609.1 399614 R 699246 CDS YP_003475608.1 289450483 8811450 400198..400680 1 NC_013895.2 putative lipoprotein 400680 8811450 HMPREF0868_1348 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475608.1 400198 D 699246 CDS YP_003475607.1 289450820 8810897 400687..402210 1 NC_013895.2 identified by match to protein family HMM PF01970; integral membrane protein 402210 8810897 HMPREF0868_1347 Clostridiales genomosp. BVAB3 str. UPII9-5 integral membrane protein YP_003475607.1 400687 D 699246 CDS YP_003475606.1 289450286 8810718 complement(402254..403195) 1 NC_013895.2 identified by match to protein family HMM PF02557; serine-type D-Ala-D-Ala carboxypeptidase 403195 8810718 HMPREF0868_1346 Clostridiales genomosp. BVAB3 str. UPII9-5 serine-type D-Ala-D-Ala carboxypeptidase YP_003475606.1 402254 R 699246 CDS YP_003475605.1 289450113 8811182 403417..405333 1 NC_013895.2 identified by match to protein family HMM PF01476; LysM domain-containing protein 405333 8811182 HMPREF0868_1345 Clostridiales genomosp. BVAB3 str. UPII9-5 LysM domain-containing protein YP_003475605.1 403417 D 699246 CDS YP_003475604.1 289450565 8810760 405446..408106 1 NC_013895.2 identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanine--tRNA ligase 408106 alaS 8810760 alaS Clostridiales genomosp. BVAB3 str. UPII9-5 alanine--tRNA ligase YP_003475604.1 405446 D 699246 CDS YP_003933629.1 308513226 8811410 408253..408396 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 408396 8811410 HMPREF0868_1343 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933629.1 408253 D 699246 CDS YP_003933630.1 308513227 8810330 408393..409403 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein 409403 8810330 HMPREF0868_1342 Clostridiales genomosp. BVAB3 str. UPII9-5 transposase, IS605 OrfB family protein YP_003933630.1 408393 D 699246 CDS YP_003475603.1 289449732 8810751 409597..409938 1 NC_013895.2 identified by match to protein family HMM PF01230; histidine triad domain-containing protein 409938 8810751 HMPREF0868_1341 Clostridiales genomosp. BVAB3 str. UPII9-5 histidine triad domain-containing protein YP_003475603.1 409597 D 699246 CDS YP_003475602.1 289450146 8810498 409969..411216 1 NC_013895.2 identified by match to protein family HMM PF03051; putative aminopeptidase E 411216 8810498 HMPREF0868_1340 Clostridiales genomosp. BVAB3 str. UPII9-5 putative aminopeptidase E YP_003475602.1 409969 D 699246 CDS YP_003475601.1 289449897 8810575 411483..411656 1 NC_013895.2 identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; 30S ribosomal protein S21 411656 rpsU 8810575 rpsU Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S21 YP_003475601.1 411483 D 699246 CDS YP_003475600.1 289449971 8811023 411838..413994 1 NC_013895.2 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 413994 recJ 8811023 recJ Clostridiales genomosp. BVAB3 str. UPII9-5 single-stranded-DNA-specific exonuclease RecJ YP_003475600.1 411838 D 699246 CDS YP_003475599.1 289450409 8810690 413999..416314 1 NC_013895.2 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; putative GTP diphosphokinase 416314 8810690 HMPREF0868_1337 Clostridiales genomosp. BVAB3 str. UPII9-5 putative GTP diphosphokinase YP_003475599.1 413999 D 699246 CDS YP_003475598.1 289450085 8811417 416375..416815 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 416815 8811417 HMPREF0868_1336 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003475598.1 416375 D 699246 CDS YP_003933631.1 308513228 8811421 complement(416917..417105) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 417105 8811421 HMPREF0868_1335 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933631.1 416917 R 699246 CDS YP_003475597.1 289450793 8810594 417298..417414 1 NC_013895.2 hypothetical protein 417414 8810594 HMPREF0868_1334 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475597.1 417298 D 699246 CDS YP_003475596.1 289449990 8810842 complement(417514..417675) 1 NC_013895.2 hypothetical protein 417675 8810842 HMPREF0868_1333 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475596.1 417514 R 699246 CDS YP_003475595.1 289450234 8810008 417700..418383 1 NC_013895.2 identified by match to protein family HMM PF07021; match to protein family HMM PF08241; match to protein family HMM PF08242; methionine biosynthesis protein MetW 418383 metW 8810008 metW Clostridiales genomosp. BVAB3 str. UPII9-5 methionine biosynthesis protein MetW YP_003475595.1 417700 D 699246 CDS YP_003475594.1 289449421 8811048 418380..418889 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 418889 8811048 HMPREF0868_1331 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003475594.1 418380 D 699246 CDS YP_003475593.1 289450434 8810298 418901..419269 1 NC_013895.2 hypothetical protein 419269 8810298 HMPREF0868_1330 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475593.1 418901 D 699246 CDS YP_003933632.1 308513229 8811234 complement(419369..419590) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 419590 8811234 HMPREF0868_1329 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933632.1 419369 R 699246 CDS YP_003475592.1 289450617 8809966 complement(419606..422059) 1 NC_013895.2 identified by match to protein family HMM PF00753; match to protein family HMM PF07521; putative ribonuclease J 1 422059 8809966 HMPREF0868_1328 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribonuclease J 1 YP_003475592.1 419606 R 699246 CDS YP_003475591.1 289449381 8811081 422392..423228 1 NC_013895.2 identified by match to protein family HMM PF00175; ferredoxin--NADP+ reductase subunit alpha 423228 8811081 HMPREF0868_1325 Clostridiales genomosp. BVAB3 str. UPII9-5 ferredoxin--NADP+ reductase subunit alpha YP_003475591.1 422392 D 699246 CDS YP_003475590.1 289450467 8810162 423282..424685 1 NC_013895.2 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01316; glutamate synthase 424685 gltA 8810162 gltA Clostridiales genomosp. BVAB3 str. UPII9-5 glutamate synthase YP_003475590.1 423282 D 699246 CDS YP_003475589.1 289449570 8810463 425163..426704 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 426704 8810463 HMPREF0868_1323 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475589.1 425163 D 699246 CDS YP_003475588.1 289449862 8811082 426701..426844 1 NC_013895.2 hypothetical protein 426844 8811082 HMPREF0868_1322 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475588.1 426701 D 699246 CDS YP_003475587.1 289450468 8810609 426985..427245 1 NC_013895.2 identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 427245 rpsT 8810609 rpsT Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S20 YP_003475587.1 426985 D 699246 CDS YP_003475586.1 289450005 8811251 427355..428281 1 NC_013895.2 hypothetical protein 428281 8811251 HMPREF0868_1320 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475586.1 427355 D 699246 CDS YP_003475585.1 289450632 8811167 complement(428375..429649) 1 NC_013895.2 identified by match to protein family HMM PF00579; match to protein family HMM TIGR00234; tyrosine--tRNA ligase 429649 tyrS 8811167 tyrS Clostridiales genomosp. BVAB3 str. UPII9-5 tyrosine--tRNA ligase YP_003475585.1 428375 R 699246 CDS YP_003475584.1 289450550 8810591 complement(429748..431073) 1 NC_013895.2 identified by match to protein family HMM PF05636; hypothetical protein 431073 8810591 HMPREF0868_1318 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475584.1 429748 R 699246 CDS YP_003475583.1 289449987 8810100 431456..432448 1 NC_013895.2 identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase 432448 pta 8810100 pta Clostridiales genomosp. BVAB3 str. UPII9-5 phosphate acetyltransferase YP_003475583.1 431456 D 699246 CDS YP_003475582.1 289449508 8810800 432549..433748 1 NC_013895.2 identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase 433748 ackA 8810800 ackA Clostridiales genomosp. BVAB3 str. UPII9-5 acetate kinase YP_003475582.1 432549 D 699246 CDS YP_003475581.1 289450192 8810435 434007..434594 1 NC_013895.2 identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 434594 infC 8810435 infC Clostridiales genomosp. BVAB3 str. UPII9-5 translation initiation factor IF-3 YP_003475581.1 434007 D 699246 CDS YP_003475580.1 289449835 8810164 434617..434814 1 NC_013895.2 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 434814 rpmI 8810164 rpmI Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L35 YP_003475580.1 434617 D 699246 CDS YP_003475579.1 289449572 8811070 434845..435201 1 NC_013895.2 identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; 50S ribosomal protein L20 435201 rplT 8811070 rplT Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L20 YP_003475579.1 434845 D 699246 CDS YP_003475578.1 289450456 8811545 435301..436104 1 NC_013895.2 identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 436104 8811545 HMPREF0868_1312 Clostridiales genomosp. BVAB3 str. UPII9-5 TrmH family RNA methyltransferase YP_003475578.1 435301 D 699246 CDS YP_003475577.1 289449365 8810306 436421..439303 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 439303 uvrA 8810306 uvrA Clostridiales genomosp. BVAB3 str. UPII9-5 excinuclease ABC subunit A YP_003475577.1 436421 D 699246 CDS YP_003475576.1 289449709 8810962 439423..442260 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM PF07724; match to protein family HMM PF07728; putative negative regulator of genetic competence ClpC/MecB 442260 8810962 HMPREF0868_1309 Clostridiales genomosp. BVAB3 str. UPII9-5 putative negative regulator of genetic competence ClpC/MecB YP_003475576.1 439423 D 699246 CDS YP_003475575.1 289450348 8810789 442257..443030 1 NC_013895.2 hypothetical protein 443030 8810789 HMPREF0868_1308 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475575.1 442257 D 699246 CDS YP_003475574.1 289450182 8810063 443030..445603 1 NC_013895.2 identified by match to protein family HMM PF01136; U32 family peptidase 445603 8810063 HMPREF0868_1307 Clostridiales genomosp. BVAB3 str. UPII9-5 U32 family peptidase YP_003475574.1 443030 D 699246 CDS YP_003475573.1 289449472 8810886 445698..446195 1 NC_013895.2 identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; dUTP diphosphatase 446195 dut 8810886 dut Clostridiales genomosp. BVAB3 str. UPII9-5 dUTP diphosphatase YP_003475573.1 445698 D 699246 CDS YP_003475572.1 289450275 8811467 446199..447254 1 NC_013895.2 identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; match to protein family HMM TIGR03723; putative glycoprotease GCP 447254 8811467 HMPREF0868_1305 Clostridiales genomosp. BVAB3 str. UPII9-5 putative glycoprotease GCP YP_003475572.1 446199 D 699246 CDS YP_003475571.1 289450836 8810562 447256..447723 1 NC_013895.2 identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086; SsrA-binding protein 447723 smpB 8810562 smpB Clostridiales genomosp. BVAB3 str. UPII9-5 SsrA-binding protein YP_003475571.1 447256 D 699246 CDS YP_003475570.1 289449958 8811269 447875..449173 1 NC_013895.2 identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 449173 tig 8811269 tig Clostridiales genomosp. BVAB3 str. UPII9-5 trigger factor YP_003475570.1 447875 D 699246 CDS YP_003475569.1 289450649 8810340 449259..449843 1 NC_013895.2 identified by match to protein family HMM PF00574; endopeptidase Clp 449843 clpP 8810340 clpP Clostridiales genomosp. BVAB3 str. UPII9-5 endopeptidase Clp YP_003475569.1 449259 D 699246 CDS YP_003475568.1 289449742 8811074 449846..451168 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM PF06689; match to protein family HMM PF07724; match to protein family HMM TIGR00382; ATP-dependent Clp protease ATP-binding subunit ClpX 451168 clpX 8811074 clpX Clostridiales genomosp. BVAB3 str. UPII9-5 ATP-dependent Clp protease ATP-binding subunit ClpX YP_003475568.1 449846 D 699246 CDS YP_003475567.1 289450460 8810233 451349..451630 1 NC_013895.2 hypothetical protein 451630 8810233 HMPREF0868_1300 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475567.1 451349 D 699246 CDS YP_003475566.1 289449637 8810983 451896..452858 1 NC_013895.2 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 452858 8810983 HMPREF0868_1299 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003475566.1 451896 D 699246 CDS YP_003475565.1 289450369 8810608 452876..453943 1 NC_013895.2 identified by match to protein family HMM PF00288; putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 453943 8810608 HMPREF0868_1298 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase YP_003475565.1 452876 D 699246 CDS YP_003475564.1 289450004 8811373 454009..454146 1 NC_013895.2 identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; 50S ribosomal protein L34 454146 rpmH 8811373 rpmH Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L34 YP_003475564.1 454009 D 699246 CDS YP_003475563.1 289450749 8810491 454200..454586 1 NC_013895.2 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 454586 rnpA 8810491 rnpA Clostridiales genomosp. BVAB3 str. UPII9-5 ribonuclease P protein component YP_003475563.1 454200 D 699246 CDS YP_003475562.1 289449890 8810837 454583..454792 1 NC_013895.2 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 454792 8810837 HMPREF0868_1295 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475562.1 454583 D 699246 CDS YP_003475561.1 289450229 8809944 454805..455770 1 NC_013895.2 identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592; YidC/Oxa1 family membrane protein insertase 455770 8809944 HMPREF0868_1294 Clostridiales genomosp. BVAB3 str. UPII9-5 YidC/Oxa1 family membrane protein insertase YP_003475561.1 454805 D 699246 CDS YP_003475560.1 289449360 8811017 455788..456474 1 NC_013895.2 identified by match to protein family HMM PF01424; R3H domain-containing protein 456474 8811017 HMPREF0868_1293 Clostridiales genomosp. BVAB3 str. UPII9-5 R3H domain-containing protein YP_003475560.1 455788 D 699246 CDS YP_003475559.1 289450403 8811311 456467..457921 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; tRNA modification GTPase TrmE 457921 trmE 8811311 trmE Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA modification GTPase TrmE YP_003475559.1 456467 D 699246 CDS YP_003475558.1 289450689 8811264 457952..459928 1 NC_013895.2 identified by match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR00136; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 459928 gidA 8811264 gidA Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_003475558.1 457952 D 699246 CDS YP_003475557.1 289450644 8810377 459925..460716 1 NC_013895.2 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; 16S rRNA methyltransferase GidB 460716 gidB 8810377 gidB Clostridiales genomosp. BVAB3 str. UPII9-5 16S rRNA methyltransferase GidB YP_003475557.1 459925 D 699246 CDS YP_003475556.1 289449779 8811096 460820..463423 1 NC_013895.2 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 463423 gyrA 8811096 gyrA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA gyrase subunit A YP_003475556.1 460820 D 699246 CDS YP_003475555.1 289450482 8811563 complement(463517..464626) 1 NC_013895.2 hypothetical protein 464626 8811563 HMPREF0868_1288 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475555.1 463517 R 699246 CDS YP_003475554.1 289450138 8810410 470486..471196 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; alkaline phosphatase synthesis transcriptional regulatory protein PhoP 471196 phoP 8810410 phoP Clostridiales genomosp. BVAB3 str. UPII9-5 alkaline phosphatase synthesis transcriptional regulatory protein PhoP YP_003475554.1 470486 D 699246 CDS YP_003475553.1 289449811 8811343 471206..473182 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 473182 8811343 HMPREF0868_1281 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003475553.1 471206 D 699246 CDS YP_003475552.1 289450719 8811178 473244..474521 1 NC_013895.2 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 474521 murA 8811178 murA Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003475552.1 473244 D 699246 CDS YP_003475551.1 289450561 8810411 474528..475349 1 NC_013895.2 identified by match to protein family HMM PF00753; metallo-beta-lactamase domain-containing protein 475349 8810411 HMPREF0868_1279 Clostridiales genomosp. BVAB3 str. UPII9-5 metallo-beta-lactamase domain-containing protein YP_003475551.1 474528 D 699246 CDS YP_003475550.1 289449812 8810333 475339..475803 1 NC_013895.2 identified by match to protein family HMM PF02590; putative rRNA large subunit m3Psi methyltransferase RlmH 475803 8810333 HMPREF0868_1278 Clostridiales genomosp. BVAB3 str. UPII9-5 putative rRNA large subunit m3Psi methyltransferase RlmH YP_003475550.1 475339 D 699246 CDS YP_003475549.1 289449735 8810840 476175..476531 1 NC_013895.2 identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; preprotein translocase subunit SecE 476531 secE 8810840 secE Clostridiales genomosp. BVAB3 str. UPII9-5 preprotein translocase subunit SecE YP_003475549.1 476175 D 699246 CDS YP_003475548.1 289450232 8811472 476528..477070 1 NC_013895.2 identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG 477070 nusG 8811472 nusG Clostridiales genomosp. BVAB3 str. UPII9-5 transcription termination/antitermination factor NusG YP_003475548.1 476528 D 699246 CDS YP_003475547.1 289450841 8810242 477127..477552 1 NC_013895.2 identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 477552 rplK 8810242 rplK Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L11 YP_003475547.1 477127 D 699246 CDS YP_003475546.1 289449646 8810682 477564..478259 1 NC_013895.2 identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 478259 rplA 8810682 rplA Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L1 YP_003475546.1 477564 D 699246 CDS YP_003475545.1 289450077 8811405 478410..478955 1 NC_013895.2 identified by match to protein family HMM PF00466; 50S ribosomal protein L10 478955 rplJ 8811405 rplJ Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L10 YP_003475545.1 478410 D 699246 CDS YP_003475544.1 289450780 8810181 478984..479361 1 NC_013895.2 identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 479361 rplL 8810181 rplL Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L7/L12 YP_003475544.1 478984 D 699246 CDS YP_003475543.1 289449588 8810443 479560..479673 1 NC_013895.2 hypothetical protein 479673 8810443 HMPREF0868_1271 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475543.1 479560 D 699246 CDS YP_003475542.1 289449842 8811555 479738..480373 1 NC_013895.2 hypothetical protein 480373 8811555 HMPREF0868_1270 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475542.1 479738 D 699246 CDS YP_003475540.1 289450449 8811375 481164..482096 1 NC_013895.2 identified by match to protein family HMM PF02603; match to protein family HMM PF07475; match to protein family HMM TIGR00679; HPr(Ser) kinase/phosphatase 482096 hprK 8811375 hprK Clostridiales genomosp. BVAB3 str. UPII9-5 HPr(Ser) kinase/phosphatase YP_003475540.1 481164 D 699246 CDS YP_003475539.1 289450751 8810705 482089..483102 1 NC_013895.2 identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylmuramate dehydrogenase 483102 murB 8810705 murB Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-N-acetylmuramate dehydrogenase YP_003475539.1 482089 D 699246 CDS YP_003475538.1 289450100 8811077 483130..484110 1 NC_013895.2 identified by match to protein family HMM PF03668; hypothetical protein 484110 8811077 HMPREF0868_1262 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475538.1 483130 D 699246 CDS YP_003475537.1 289450463 8810121 484103..485005 1 NC_013895.2 identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein 485005 8810121 HMPREF0868_1261 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475537.1 484103 D 699246 CDS YP_003475536.1 289449529 8810216 485009..485839 1 NC_013895.2 identified by match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator 485839 8810216 HMPREF0868_1260 Clostridiales genomosp. BVAB3 str. UPII9-5 Crp/Fnr family transcriptional regulator YP_003475536.1 485009 D 699246 CDS YP_003475535.1 289449623 8810888 485904..487202 1 NC_013895.2 identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; serine--tRNA ligase 487202 serS 8810888 serS Clostridiales genomosp. BVAB3 str. UPII9-5 serine--tRNA ligase YP_003475535.1 485904 D 699246 CDS YP_003475534.1 289450277 8809989 487204..488583 1 NC_013895.2 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 488583 8809989 HMPREF0868_1258 Clostridiales genomosp. BVAB3 str. UPII9-5 MATE efflux family protein YP_003475534.1 487204 D 699246 CDS YP_003475533.1 289449403 8810811 488648..489898 1 NC_013895.2 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01882; peptidase T 489898 pepT 8810811 pepT Clostridiales genomosp. BVAB3 str. UPII9-5 peptidase T YP_003475533.1 488648 D 699246 CDS YP_003475532.1 289450203 8811399 489981..490853 1 NC_013895.2 hypothetical protein 490853 8811399 HMPREF0868_1256 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475532.1 489981 D 699246 CDS YP_003475531.1 289450774 8810723 complement(491042..491491) 1 NC_013895.2 hypothetical protein 491491 8810723 HMPREF0868_1255 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475531.1 491042 R 699246 CDS YP_003475530.1 289450118 8811171 complement(491479..492279) 1 NC_013895.2 identified by match to protein family HMM PF06738; hypothetical protein 492279 8811171 HMPREF0868_1254 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475530.1 491479 R 699246 CDS YP_003475529.1 289450554 8810534 492754..495108 1 NC_013895.2 hypothetical protein 495108 8810534 HMPREF0868_1253 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475529.1 492754 D 699246 CDS YP_003475528.1 289449931 8810850 495099..499547 1 NC_013895.2 hypothetical protein 499547 8810850 HMPREF0868_1252 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475528.1 495099 D 699246 CDS YP_003475527.1 289450242 8810346 499572..500633 1 NC_013895.2 hypothetical protein 500633 8810346 HMPREF0868_1251 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475527.1 499572 D 699246 CDS YP_003475526.1 289449748 8810993 500940..502415 1 NC_013895.2 identified by match to protein family HMM PF09479; hypothetical protein 502415 8810993 HMPREF0868_1250 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475526.1 500940 D 699246 CDS YP_003475525.1 289450379 8810092 502420..502560 1 NC_013895.2 hypothetical protein 502560 8810092 HMPREF0868_1249 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475525.1 502420 D 699246 CDS YP_003475524.1 289449501 8811177 502611..503039 1 NC_013895.2 identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981; 30S ribosomal protein S12 503039 rpsL 8811177 rpsL Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S12 YP_003475524.1 502611 D 699246 CDS YP_003475523.1 289450560 8810662 503183..503653 1 NC_013895.2 identified by match to protein family HMM PF00177; match to protein family HMM TIGR01029; 30S ribosomal protein S7 503653 rpsG 8810662 rpsG Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S7 YP_003475523.1 503183 D 699246 CDS YP_003475522.1 289450057 8810286 503674..505740 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G 505740 fusA 8810286 fusA Clostridiales genomosp. BVAB3 str. UPII9-5 translation elongation factor G YP_003475522.1 503674 D 699246 CDS YP_003475521.1 289449690 8810829 505875..507074 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00485; translation elongation factor Tu 507074 tuf 8810829 tuf Clostridiales genomosp. BVAB3 str. UPII9-5 translation elongation factor Tu YP_003475521.1 505875 D 699246 CDS YP_003475520.1 289450221 8810123 507234..509753 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; endopeptidase La 509753 lon 8810123 lon Clostridiales genomosp. BVAB3 str. UPII9-5 endopeptidase La YP_003475520.1 507234 D 699246 CDS YP_003475519.1 289449531 8811403 509740..510387 1 NC_013895.2 identified by match to protein family HMM PF01205; hypothetical protein 510387 8811403 HMPREF0868_1243 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475519.1 509740 D 699246 CDS YP_003475518.1 289450778 8810725 510392..511165 1 NC_013895.2 identified by match to protein family HMM PF01936; hypothetical protein 511165 8810725 HMPREF0868_1242 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475518.1 510392 D 699246 CDS YP_003475517.1 289450120 8810022 511232..512755 1 NC_013895.2 identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 512755 malQ 8810022 malQ Clostridiales genomosp. BVAB3 str. UPII9-5 4-alpha-glucanotransferase YP_003475517.1 511232 D 699246 CDS YP_003475516.1 289449435 8810183 512823..513380 1 NC_013895.2 identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 513380 efp 8810183 efp Clostridiales genomosp. BVAB3 str. UPII9-5 translation elongation factor P YP_003475516.1 512823 D 699246 CDS YP_003475515.1 289449590 8810926 513389..513766 1 NC_013895.2 identified by match to protein family HMM PF03780; hypothetical protein 513766 8810926 HMPREF0868_1239 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475515.1 513389 D 699246 CDS YP_003475514.1 289450314 8810035 513759..514307 1 NC_013895.2 hypothetical protein 514307 8810035 HMPREF0868_1238 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475514.1 513759 D 699246 CDS YP_003475513.1 289449446 8810919 514304..514543 1 NC_013895.2 hypothetical protein 514543 8810919 HMPREF0868_1237 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475513.1 514304 D 699246 CDS YP_003475512.1 289450308 8810651 514555..515010 1 NC_013895.2 identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 515010 nusB 8810651 nusB Clostridiales genomosp. BVAB3 str. UPII9-5 transcription antitermination factor NusB YP_003475512.1 514555 D 699246 CDS YP_003475511.1 289450046 8811383 515010..516344 1 NC_013895.2 identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit 516344 xseA 8811383 xseA Clostridiales genomosp. BVAB3 str. UPII9-5 exodeoxyribonuclease VII large subunit YP_003475511.1 515010 D 699246 CDS YP_003475510.1 289450758 8810531 516337..516633 1 NC_013895.2 identified by match to protein family HMM PF02609; match to protein family HMM TIGR01280; exodeoxyribonuclease VII small subunit 516633 xseB 8810531 xseB Clostridiales genomosp. BVAB3 str. UPII9-5 exodeoxyribonuclease VII small subunit YP_003475510.1 516337 D 699246 CDS YP_003475509.1 289449928 8811210 516617..517627 1 NC_013895.2 identified by match to protein family HMM PF00348; geranyltranstransferase family protein 517627 8811210 HMPREF0868_1233 Clostridiales genomosp. BVAB3 str. UPII9-5 geranyltranstransferase family protein YP_003475509.1 516617 D 699246 CDS YP_003475508.1 289450593 8810517 517632..519725 1 NC_013895.2 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204; 1-deoxy-D-xylulose-5-phosphate synthase 519725 dxs 8810517 dxs Clostridiales genomosp. BVAB3 str. UPII9-5 1-deoxy-D-xylulose-5-phosphate synthase YP_003475508.1 517632 D 699246 CDS YP_003475507.1 289449914 8810676 519700..520551 1 NC_013895.2 identified by match to protein family HMM PF01513; NAD(+)/NADH kinase 520551 8810676 HMPREF0868_1231 Clostridiales genomosp. BVAB3 str. UPII9-5 NAD(+)/NADH kinase YP_003475507.1 519700 D 699246 CDS YP_003475506.1 289450071 8809974 520569..522299 1 NC_013895.2 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 522299 recN 8809974 recN Clostridiales genomosp. BVAB3 str. UPII9-5 DNA repair protein RecN YP_003475506.1 520569 D 699246 CDS YP_003475505.1 289449388 8810418 522545..523300 1 NC_013895.2 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 523300 8810418 HMPREF0868_1228 Clostridiales genomosp. BVAB3 str. UPII9-5 short chain dehydrogenase/reductase family oxidoreductase YP_003475505.1 522545 D 699246 CDS YP_003475504.1 289449819 8810068 complement(523362..524426) 1 NC_013895.2 identified by match to protein family HMM PF00849; RluA family pseudouridine synthase 524426 8810068 HMPREF0868_1227 Clostridiales genomosp. BVAB3 str. UPII9-5 RluA family pseudouridine synthase YP_003475504.1 523362 R 699246 CDS YP_003475503.1 289449477 8810677 524916..525608 1 NC_013895.2 hypothetical protein 525608 8810677 HMPREF0868_1226 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475503.1 524916 D 699246 CDS YP_003475502.1 289450072 8810299 complement(525945..526328) 1 NC_013895.2 hypothetical protein 526328 8810299 HMPREF0868_1225 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475502.1 525945 R 699246 CDS YP_003475501.1 289449702 8810975 complement(526341..527867) 1 NC_013895.2 hypothetical protein 527867 8810975 HMPREF0868_1224 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475501.1 526341 R 699246 CDS YP_003475500.1 289450361 8811128 complement(527879..530515) 1 NC_013895.2 identified by match to protein family HMM PF04851; type III restriction enzyme, res subunit 530515 8811128 HMPREF0868_1223 Clostridiales genomosp. BVAB3 str. UPII9-5 type III restriction enzyme, res subunit YP_003475500.1 527879 R 699246 CDS YP_003475499.1 289450512 8810273 complement(530519..532417) 1 NC_013895.2 identified by match to protein family HMM PF01555; DNA (cytosine-5-)-methyltransferase 532417 8810273 HMPREF0868_1222 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA (cytosine-5-)-methyltransferase YP_003475499.1 530519 R 699246 CDS YP_003475498.1 289449677 8810515 533018..533785 1 NC_013895.2 hypothetical protein 533785 8810515 HMPREF0868_1221 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475498.1 533018 D 699246 CDS YP_003475497.1 289449912 8810246 534550..535209 1 NC_013895.2 identified by match to protein family HMM PF00436; single-strand binding family protein 535209 8810246 HMPREF0868_1220 Clostridiales genomosp. BVAB3 str. UPII9-5 single-strand binding family protein YP_003475497.1 534550 D 699246 CDS YP_003475496.1 289449650 8810697 535352..535558 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 535558 8810697 HMPREF0868_1219 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003475496.1 535352 D 699246 CDS YP_003475495.1 289450092 8811411 535649..536674 1 NC_013895.2 hypothetical protein 536674 8811411 HMPREF0868_1218 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475495.1 535649 D 699246 CDS YP_003933633.1 308513230 8810799 536674..537564 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 537564 8810799 HMPREF0868_1217 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933633.1 536674 D 699246 CDS YP_003933634.1 308513231 8810683 537568..538287 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 538287 8810683 HMPREF0868_1216 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933634.1 537568 D 699246 CDS YP_003475494.1 289450078 8810954 538611..538925 1 NC_013895.2 identified by match to protein family HMM PF06125; hypothetical protein 538925 8810954 HMPREF0868_1215 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475494.1 538611 D 699246 CDS YP_003475493.1 289450342 8810096 538941..539327 1 NC_013895.2 identified by match to protein family HMM PF06125; hypothetical protein 539327 8810096 HMPREF0868_1214 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475493.1 538941 D 699246 CDS YP_003475492.1 289449505 8811139 539356..540741 1 NC_013895.2 identified by match to protein family HMM PF01580; FtsK/SpoIIIE family protein 540741 8811139 HMPREF0868_1213 Clostridiales genomosp. BVAB3 str. UPII9-5 FtsK/SpoIIIE family protein YP_003475492.1 539356 D 699246 CDS YP_003475491.1 289450523 8811033 540919..542124 1 NC_013895.2 identified by match to protein family HMM PF01381; match to protein family HMM PF02486; DNA-binding helix-turn-helix protein 542124 8811033 HMPREF0868_1212 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003475491.1 540919 D 699246 CDS YP_003475490.1 289450419 8811011 542167..542388 1 NC_013895.2 hypothetical protein 542388 8811011 HMPREF0868_1211 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475490.1 542167 D 699246 CDS YP_003475489.1 289450397 8810188 542505..542999 1 NC_013895.2 identified by match to protein family HMM PF07275; antirestriction protein 542999 ardA 8810188 ardA Clostridiales genomosp. BVAB3 str. UPII9-5 antirestriction protein YP_003475489.1 542505 D 699246 CDS YP_003475488.1 289449595 8811274 542974..543480 1 NC_013895.2 hypothetical protein 543480 8811274 HMPREF0868_1209 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475488.1 542974 D 699246 CDS YP_003933635.1 308513232 8810433 543464..544579 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 544579 8810433 HMPREF0868_1208 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933635.1 543464 D 699246 CDS YP_003933636.1 308513233 8810736 544576..545910 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; ATP/GTP-binding family protein 545910 8810736 HMPREF0868_1207 Clostridiales genomosp. BVAB3 str. UPII9-5 ATP/GTP-binding family protein YP_003933636.1 544576 D 699246 CDS YP_003475487.1 289450131 8811224 545913..548090 1 NC_013895.2 hypothetical protein 548090 8811224 HMPREF0868_1206 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475487.1 545913 D 699246 CDS YP_003475486.1 289450607 8810518 548087..549088 1 NC_013895.2 identified by match to protein family HMM PF00877; NlpC/P60 family protein 549088 8810518 HMPREF0868_1205 Clostridiales genomosp. BVAB3 str. UPII9-5 NlpC/P60 family protein YP_003475486.1 548087 D 699246 CDS YP_003475485.1 289449915 8810251 549103..550020 1 NC_013895.2 hypothetical protein 550020 8810251 HMPREF0868_1204 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475485.1 549103 D 699246 CDS YP_003475484.1 289449655 8810240 550265..550381 1 NC_013895.2 identified by match to protein family HMM PF08076; tetracycline resistance determinant leader peptide 550381 8810240 HMPREF0868_1203 Clostridiales genomosp. BVAB3 str. UPII9-5 tetracycline resistance determinant leader peptide YP_003475484.1 550265 D 699246 CDS YP_003475483.1 289449644 8810996 550397..552316 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; putative translation elongation factor G 552316 8810996 HMPREF0868_1202 Clostridiales genomosp. BVAB3 str. UPII9-5 putative translation elongation factor G YP_003475483.1 550397 D 699246 CDS YP_003475482.1 289450382 8811429 complement(552662..553015) 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 553015 8811429 HMPREF0868_1201 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003475482.1 552662 R 699246 CDS YP_003475481.1 289450801 8810537 553520..553942 1 NC_013895.2 identified by match to protein family HMM PF04545; match to protein family HMM PF08281; sigma-70, region 4 553942 8810537 HMPREF0868_1200 Clostridiales genomosp. BVAB3 str. UPII9-5 sigma-70, region 4 YP_003475481.1 553520 D 699246 CDS YP_003475480.1 289449933 8809985 complement(554233..554361) 1 NC_013895.2 hypothetical protein 554361 8809985 HMPREF0868_1199 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475480.1 554233 R 699246 CDS YP_003475479.1 289449399 8811505 554630..554833 1 NC_013895.2 identified by match to protein family HMM PF09035; DNA binding domain-containing protein, excisionase family 554833 8811505 HMPREF0868_1198 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA binding domain-containing protein, excisionase family YP_003475479.1 554630 D 699246 CDS YP_003933637.1 308513234 8810209 555243..556133 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00589; phage integrase family site-specific recombinase 556133 8810209 HMPREF0868_1197 Clostridiales genomosp. BVAB3 str. UPII9-5 phage integrase family site-specific recombinase YP_003933637.1 555243 D 699246 CDS YP_003475478.1 289449616 8810892 complement(556418..557749) 1 NC_013895.2 identified by match to protein family HMM PF03432; relaxase/mobilization nuclease domain-containing protein 557749 8810892 HMPREF0868_1196 Clostridiales genomosp. BVAB3 str. UPII9-5 relaxase/mobilization nuclease domain-containing protein YP_003475478.1 556418 R 699246 CDS YP_003475477.1 289450281 8811020 complement(557752..558108) 1 NC_013895.2 hypothetical protein 558108 8811020 HMPREF0868_1195 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475477.1 557752 R 699246 CDS YP_003475476.1 289450406 8809962 558382..559590 1 NC_013895.2 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 559590 8809962 HMPREF0868_1194 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003475476.1 558382 D 699246 CDS YP_003475475.1 289449378 8811040 complement(559636..560616) 1 NC_013895.2 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 560616 8811040 HMPREF0868_1193 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003475475.1 559636 R 699246 CDS YP_003475474.1 289450426 8810316 560703..561401 1 NC_013895.2 identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein 561401 8810316 HMPREF0868_1192 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475474.1 560703 D 699246 CDS YP_003475473.1 289449719 8810259 561398..562129 1 NC_013895.2 identified by match to protein family HMM PF02361; cobalt transport protein 562129 8810259 HMPREF0868_1191 Clostridiales genomosp. BVAB3 str. UPII9-5 cobalt transport protein YP_003475473.1 561398 D 699246 CDS YP_003475472.1 289449663 8810365 562126..563595 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 563595 8810365 HMPREF0868_1190 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475472.1 562126 D 699246 CDS YP_003475471.1 289449767 8810078 563597..565354 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 565354 8810078 HMPREF0868_1189 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475471.1 563597 D 699246 CDS YP_003475470.1 289449487 8810929 565354..567063 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 567063 8810929 HMPREF0868_1188 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475470.1 565354 D 699246 CDS YP_003475469.1 289450317 8810027 567075..568232 1 NC_013895.2 identified by match to protein family HMM PF01325; match to protein family HMM PF01554; iron dependent repressor, N-terminal DNA binding domain-containing protein 568232 8810027 HMPREF0868_1187 Clostridiales genomosp. BVAB3 str. UPII9-5 iron dependent repressor, N-terminal DNA binding domain-containing protein YP_003475469.1 567075 D 699246 CDS YP_003475468.1 289449438 8811106 568305..568421 1 NC_013895.2 hypothetical protein 568421 8811106 HMPREF0868_1186 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475468.1 568305 D 699246 CDS YP_003475467.1 289450492 8810627 568547..568963 1 NC_013895.2 identified by match to protein family HMM PF04545; sigma-70, region 4 568963 8810627 HMPREF0868_1185 Clostridiales genomosp. BVAB3 str. UPII9-5 sigma-70, region 4 YP_003475467.1 568547 D 699246 CDS YP_003475466.1 289450023 8810907 569552..570382 1 NC_013895.2 identified by match to protein family HMM PF01863; hypothetical protein 570382 8810907 HMPREF0868_1184 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475466.1 569552 D 699246 CDS YP_003475465.1 289450296 8810423 570555..571901 1 NC_013895.2 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; NADH oxidase 571901 noxE 8810423 noxE Clostridiales genomosp. BVAB3 str. UPII9-5 NADH oxidase YP_003475465.1 570555 D 699246 CDS YP_003475464.1 289449824 8811300 572181..572906 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 572906 8811300 HMPREF0868_1182 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475464.1 572181 D 699246 CDS YP_003475463.1 289450678 8811198 572906..575146 1 NC_013895.2 identified by match to protein family HMM PF02687; efflux ABC transporter permease 575146 8811198 HMPREF0868_1181 Clostridiales genomosp. BVAB3 str. UPII9-5 efflux ABC transporter permease YP_003475463.1 572906 D 699246 CDS YP_003475462.1 289450581 8810525 complement(575303..576010) 1 NC_013895.2 identified by match to protein family HMM PF00230; putative glycerol uptake facilitator 576010 8810525 HMPREF0868_1180 Clostridiales genomosp. BVAB3 str. UPII9-5 putative glycerol uptake facilitator YP_003475462.1 575303 R 699246 CDS YP_003475461.1 289449922 8811052 complement(576131..577408) 1 NC_013895.2 hypothetical protein 577408 8811052 HMPREF0868_1179 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475461.1 576131 R 699246 CDS YP_003475460.1 289450438 8810311 577612..578265 1 NC_013895.2 identified by match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator 578265 8810311 HMPREF0868_1178 Clostridiales genomosp. BVAB3 str. UPII9-5 Crp/Fnr family transcriptional regulator YP_003475460.1 577612 D 699246 CDS YP_003475459.1 289449714 8810838 578327..578677 1 NC_013895.2 identified by match to protein family HMM PF04297; match to protein family HMM PF04545; match to protein family HMM PF08281; sigma-70, region 4 578677 8810838 HMPREF0868_1177 Clostridiales genomosp. BVAB3 str. UPII9-5 sigma-70, region 4 YP_003475459.1 578327 D 699246 CDS YP_003475458.1 289450230 8811327 578888..580246 1 NC_013895.2 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 580246 ffh 8811327 ffh Clostridiales genomosp. BVAB3 str. UPII9-5 signal recognition particle protein YP_003475458.1 578888 D 699246 CDS YP_003475457.1 289450703 8811032 580285..580530 1 NC_013895.2 identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 580530 rpsP 8811032 rpsP Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S16 YP_003475457.1 580285 D 699246 CDS YP_003475456.1 289450418 8811153 580527..580778 1 NC_013895.2 hypothetical protein 580778 8811153 HMPREF0868_1174 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475456.1 580527 D 699246 CDS YP_003475455.1 289450536 8810445 580786..581364 1 NC_013895.2 identified by match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 581364 rimM 8810445 rimM Clostridiales genomosp. BVAB3 str. UPII9-5 16S rRNA processing protein RimM YP_003475455.1 580786 D 699246 CDS YP_003475454.1 289449844 8810654 581376..582125 1 NC_013895.2 identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N(1)-)-methyltransferase 582125 trmD 8810654 trmD Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA (guanine-N(1)-)-methyltransferase YP_003475454.1 581376 D 699246 CDS YP_003475453.1 289450049 8811261 582232..582585 1 NC_013895.2 identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 582585 rplS 8811261 rplS Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L19 YP_003475453.1 582232 D 699246 CDS YP_003475452.1 289450641 8810578 582715..583557 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM TIGR03596; ribosome biogenesis GTP-binding protein YlqF 583557 ylqF 8810578 ylqF Clostridiales genomosp. BVAB3 str. UPII9-5 ribosome biogenesis GTP-binding protein YlqF YP_003475452.1 582715 D 699246 CDS YP_003475451.1 289449974 8810797 583663..584349 1 NC_013895.2 identified by match to protein family HMM PF01351; ribonuclease HII 584349 rnhB 8810797 rnhB Clostridiales genomosp. BVAB3 str. UPII9-5 ribonuclease HII YP_003475451.1 583663 D 699246 CDS YP_003475450.1 289450190 8810134 584343..584861 1 NC_013895.2 hypothetical protein 584861 8810134 HMPREF0868_1168 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475450.1 584343 D 699246 CDS YP_003475449.1 289449542 8810211 585029..585784 1 NC_013895.2 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 585784 8810211 HMPREF0868_1167 Clostridiales genomosp. BVAB3 str. UPII9-5 GntR family transcriptional regulator YP_003475449.1 585029 D 699246 CDS YP_003475448.1 289449618 8810532 585809..586972 1 NC_013895.2 identified by match to protein family HMM PF00266; putative cysteine desulfurase 586972 8810532 HMPREF0868_1166 Clostridiales genomosp. BVAB3 str. UPII9-5 putative cysteine desulfurase YP_003475448.1 585809 D 699246 CDS YP_003475447.1 289449929 8811187 587073..588248 1 NC_013895.2 identified by match to protein family HMM PF02568; match to protein family HMM PF02926; match to protein family HMM PF06508; match to protein family HMM TIGR00342; thiamine biosynthesis/tRNA modification protein ThiI 588248 thiI 8811187 thiI Clostridiales genomosp. BVAB3 str. UPII9-5 thiamine biosynthesis/tRNA modification protein ThiI YP_003475447.1 587073 D 699246 CDS YP_003475446.1 289450570 8810508 588283..589584 1 NC_013895.2 identified by match to protein family HMM PF00004; recombination factor protein RarA 589584 8810508 HMPREF0868_1164 Clostridiales genomosp. BVAB3 str. UPII9-5 recombination factor protein RarA YP_003475446.1 588283 D 699246 CDS YP_003475445.1 289449906 8810548 589577..590728 1 NC_013895.2 identified by match to protein family HMM PF00266; match to protein family HMM PF01212; putative cysteine desulfurase NifS 590728 8810548 HMPREF0868_1163 Clostridiales genomosp. BVAB3 str. UPII9-5 putative cysteine desulfurase NifS YP_003475445.1 589577 D 699246 CDS YP_003475444.1 289449944 8811490 590750..591388 1 NC_013895.2 identified by match to protein family HMM PF00657; GDSL-like protein 591388 8811490 HMPREF0868_1162 Clostridiales genomosp. BVAB3 str. UPII9-5 GDSL-like protein YP_003475444.1 590750 D 699246 CDS YP_003475443.1 289450858 8811130 591663..592034 1 NC_013895.2 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 592034 8811130 HMPREF0868_1161 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003475443.1 591663 D 699246 CDS YP_003475442.1 289450514 8810533 complement(592108..593091) 1 NC_013895.2 identified by match to protein family HMM PF00849; putative rRNA pseudouridylate synthase C 593091 8810533 HMPREF0868_1160 Clostridiales genomosp. BVAB3 str. UPII9-5 putative rRNA pseudouridylate synthase C YP_003475442.1 592108 R 699246 CDS YP_003475441.1 289449930 8810263 593275..593964 1 NC_013895.2 identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 593964 mtnN 8810263 mtnN Clostridiales genomosp. BVAB3 str. UPII9-5 MTA/SAH nucleosidase YP_003475441.1 593275 D 699246 CDS YP_003475440.1 289449667 8811172 594245..595300 1 NC_013895.2 identified by match to protein family HMM PF00107; match to protein family HMM PF08240; GroES-like protein 595300 8811172 HMPREF0868_1158 Clostridiales genomosp. BVAB3 str. UPII9-5 GroES-like protein YP_003475440.1 594245 D 699246 CDS YP_003475439.1 289450555 8811521 595379..596329 1 NC_013895.2 identified by match to protein family HMM PF02492; CobW/P47K family protein 596329 8811521 HMPREF0868_1157 Clostridiales genomosp. BVAB3 str. UPII9-5 CobW/P47K family protein YP_003475439.1 595379 D 699246 CDS YP_003475438.1 289449400 8810913 596782..598473 1 NC_013895.2 identified by match to protein family HMM PF01432; match to protein family HMM TIGR02289; M3 family oligoendopeptidase 598473 8810913 HMPREF0868_1154 Clostridiales genomosp. BVAB3 str. UPII9-5 M3 family oligoendopeptidase YP_003475438.1 596782 D 699246 CDS YP_003475437.1 289450302 8810485 598474..601533 1 NC_013895.2 identified by match to protein family HMM PF08245; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase 601533 8810485 HMPREF0868_1153 Clostridiales genomosp. BVAB3 str. UPII9-5 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_003475437.1 598474 D 699246 CDS YP_003475436.1 289449884 8811207 601607..602323 1 NC_013895.2 identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 602323 8811207 HMPREF0868_1152 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475436.1 601607 D 699246 CDS YP_003475435.1 289450590 8810696 602489..603526 1 NC_013895.2 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; 23S rRNA m2A2503 methyltransferase 603526 rlmN 8810696 rlmN Clostridiales genomosp. BVAB3 str. UPII9-5 23S rRNA m2A2503 methyltransferase YP_003475435.1 602489 D 699246 CDS YP_003475434.1 289450091 8811412 603529..604260 1 NC_013895.2 identified by match to protein family HMM PF00481; protein phosphatase 2C 604260 8811412 HMPREF0868_1150 Clostridiales genomosp. BVAB3 str. UPII9-5 protein phosphatase 2C YP_003475434.1 603529 D 699246 CDS YP_003475433.1 289450785 8810755 604278..606080 1 NC_013895.2 identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714; putative serine/threonine-protein kinase PrkC 606080 8810755 HMPREF0868_1149 Clostridiales genomosp. BVAB3 str. UPII9-5 putative serine/threonine-protein kinase PrkC YP_003475433.1 604278 D 699246 CDS YP_003475432.1 289450149 8810131 606087..607139 1 NC_013895.2 identified by match to protein family HMM PF03193; match to protein family HMM TIGR00157; ribosome small subunit-dependent GTPase A 607139 rsgA 8810131 rsgA Clostridiales genomosp. BVAB3 str. UPII9-5 ribosome small subunit-dependent GTPase A YP_003475432.1 606087 D 699246 CDS YP_003475431.1 289449539 8810949 607260..607982 1 NC_013895.2 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 607982 rpe 8810949 rpe Clostridiales genomosp. BVAB3 str. UPII9-5 ribulose-phosphate 3-epimerase YP_003475431.1 607260 D 699246 CDS YP_003475430.1 289450337 8810241 608038..608697 1 NC_013895.2 identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine diphosphokinase 608697 8810241 HMPREF0868_1146 Clostridiales genomosp. BVAB3 str. UPII9-5 thiamine diphosphokinase YP_003475430.1 608038 D 699246 CDS YP_003475429.1 289449645 8810830 608725..610203 1 NC_013895.2 identified by match to protein family HMM PF01551; M23 family peptidase 610203 8810830 HMPREF0868_1145 Clostridiales genomosp. BVAB3 str. UPII9-5 M23 family peptidase YP_003475429.1 608725 D 699246 CDS YP_003475428.1 289450222 8810139 610312..610986 1 NC_013895.2 identified by match to protein family HMM PF01987; match to protein family HMM TIGR00266; hypothetical protein 610986 8810139 HMPREF0868_1144 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475428.1 610312 D 699246 CDS YP_003475427.1 289449547 8811006 611423..612580 1 NC_013895.2 identified by match to protein family HMM PF01094; receptor family ligand-binding protein 612580 8811006 HMPREF0868_1143 Clostridiales genomosp. BVAB3 str. UPII9-5 receptor family ligand-binding protein YP_003475427.1 611423 D 699246 CDS YP_003475426.1 289450392 8810230 612592..613467 1 NC_013895.2 identified by match to protein family HMM PF02653; putative high-affinity branched-chain amino acid ABC transporter permease LivH 613467 8810230 HMPREF0868_1142 Clostridiales genomosp. BVAB3 str. UPII9-5 putative high-affinity branched-chain amino acid ABC transporter permease LivH YP_003475426.1 612592 D 699246 CDS YP_003933638.1 308513235 8811212 613464..614483 1 NC_013895.2 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 614483 8811212 HMPREF0868_1141 Clostridiales genomosp. BVAB3 str. UPII9-5 branched-chain amino acid ABC transporter permease YP_003933638.1 613464 D 699246 CDS YP_003475425.1 289450595 8810494 614480..615253 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 615253 8810494 HMPREF0868_1140 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475425.1 614480 D 699246 CDS YP_003475424.1 289449893 8810558 615246..615950 1 NC_013895.2 identified by match to protein family HMM PF00005; high-affinity branched-chain amino acid transport ATP-binding protein LivF 615950 livF 8810558 livF Clostridiales genomosp. BVAB3 str. UPII9-5 high-affinity branched-chain amino acid transport ATP-binding protein LivF YP_003475424.1 615246 D 699246 CDS YP_003475423.1 289449954 8811134 615959..616945 1 NC_013895.2 identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363; dihydroxyacetone kinase subunit DhaK 616945 dhaK 8811134 dhaK Clostridiales genomosp. BVAB3 str. UPII9-5 dihydroxyacetone kinase subunit DhaK YP_003475423.1 615959 D 699246 CDS YP_003475422.1 289450518 8811201 616946..617596 1 NC_013895.2 identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365; dihydroxyacetone kinase subunit L 617596 dhaL 8811201 dhaL Clostridiales genomosp. BVAB3 str. UPII9-5 dihydroxyacetone kinase subunit L YP_003475422.1 616946 D 699246 CDS YP_003475421.1 289450584 8810456 617706..618617 1 NC_013895.2 hypothetical protein 618617 8810456 HMPREF0868_1136 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475421.1 617706 D 699246 CDS YP_003475420.1 289449855 8810159 618643..619653 1 NC_013895.2 hypothetical protein 619653 8810159 HMPREF0868_1135 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475420.1 618643 D 699246 CDS YP_003475419.1 289449567 8810906 complement(619803..620417) 1 NC_013895.2 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 620417 8810906 HMPREF0868_1134 Clostridiales genomosp. BVAB3 str. UPII9-5 GntR family transcriptional regulator YP_003475419.1 619803 R 699246 CDS YP_003475418.1 289450295 8810502 620650..621645 1 NC_013895.2 identified by match to protein family HMM PF00365; match to protein family HMM TIGR02482; 6-phosphofructokinase 621645 pfkA 8810502 pfkA Clostridiales genomosp. BVAB3 str. UPII9-5 6-phosphofructokinase YP_003475418.1 620650 D 699246 CDS YP_003475417.1 289449901 8811071 621664..622218 1 NC_013895.2 identified by match to protein family HMM PF01066; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 622218 8811071 HMPREF0868_1132 Clostridiales genomosp. BVAB3 str. UPII9-5 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003475417.1 621664 D 699246 CDS YP_003475416.1 289450457 8810170 622433..624892 1 NC_013895.2 identified by match to protein family HMM PF00488; match to protein family HMM PF01713; match to protein family HMM TIGR01069; putative recombination and DNA strand exchange inhibitor protein 624892 8810170 HMPREF0868_1131 Clostridiales genomosp. BVAB3 str. UPII9-5 putative recombination and DNA strand exchange inhibitor protein YP_003475416.1 622433 D 699246 CDS YP_003475415.1 289449578 8810978 complement(624921..625412) 1 NC_013895.2 identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 625412 8810978 HMPREF0868_1130 Clostridiales genomosp. BVAB3 str. UPII9-5 TrmH family RNA methyltransferase YP_003475415.1 624921 R 699246 CDS YP_003475414.1 289450364 8810716 625537..626130 1 NC_013895.2 hypothetical protein 626130 8810716 HMPREF0868_1129 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475414.1 625537 D 699246 CDS YP_003475413.1 289450111 8811390 626136..628028 1 NC_013895.2 identified by match to protein family HMM PF00501; AMP-binding enzyme 628028 8811390 HMPREF0868_1128 Clostridiales genomosp. BVAB3 str. UPII9-5 AMP-binding enzyme YP_003475413.1 626136 D 699246 CDS YP_003475412.1 289450765 8810431 complement(628120..629001) 1 NC_013895.2 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 629001 8810431 HMPREF0868_1127 Clostridiales genomosp. BVAB3 str. UPII9-5 LysR substrate binding domain-containing protein YP_003475412.1 628120 R 699246 CDS YP_003475411.1 289449832 8811307 629206..630495 1 NC_013895.2 hypothetical protein 630495 8811307 HMPREF0868_1126 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475411.1 629206 D 699246 CDS YP_003475410.1 289450685 8810039 630497..631174 1 NC_013895.2 identified by match to protein family HMM PF06912; hypothetical protein 631174 8810039 HMPREF0868_1125 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475410.1 630497 D 699246 CDS YP_003475409.1 289449449 8810828 631201..632013 1 NC_013895.2 identified by match to protein family HMM PF00119; ATP synthase subunit A 632013 8810828 HMPREF0868_1124 Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase subunit A YP_003475409.1 631201 D 699246 CDS YP_003475408.1 289450220 8810323 632087..632467 1 NC_013895.2 identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C 632467 atpE 8810323 atpE Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase F0 subunit C YP_003475408.1 632087 D 699246 CDS YP_003475407.1 289449725 8810942 632480..632965 1 NC_013895.2 identified by match to protein family HMM PF00430; ATP synthase B/B' CF(0) 632965 8810942 HMPREF0868_1122 Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase B/B' CF(0) YP_003475407.1 632480 D 699246 CDS YP_003475406.1 289450330 8811271 632965..634854 1 NC_013895.2 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM PF09378; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 634854 atpA 8811271 atpA Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase F1 subunit alpha YP_003475406.1 632965 D 699246 CDS YP_003475405.1 289450651 8810338 634841..635758 1 NC_013895.2 identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 635758 atpG 8810338 atpG Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase F1 subunit gamma YP_003475405.1 634841 D 699246 CDS YP_003475404.1 289449740 8810899 635758..637158 1 NC_013895.2 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039; ATP synthase F1 subunit beta 637158 atpD 8810899 atpD Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase F1 subunit beta YP_003475404.1 635758 D 699246 CDS YP_003475403.1 289450288 8811444 637168..637587 1 NC_013895.2 identified by match to protein family HMM PF00401; match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 637587 atpC 8811444 atpC Clostridiales genomosp. BVAB3 str. UPII9-5 ATP synthase F1 subunit epsilon YP_003475403.1 637168 D 699246 CDS YP_003475402.1 289450814 8810963 637828..638823 1 NC_013895.2 identified by match to protein family HMM PF01297; periplasmic solute binding family protein 638823 8810963 HMPREF0868_1117 Clostridiales genomosp. BVAB3 str. UPII9-5 periplasmic solute binding family protein YP_003475402.1 637828 D 699246 CDS YP_003475401.1 289450349 8811553 638848..640884 1 NC_013895.2 putative lipoprotein 640884 8811553 HMPREF0868_1116 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475401.1 638848 D 699246 CDS YP_003475400.1 289449918 8810852 641562..641690 1 NC_013895.2 hypothetical protein 641690 8810852 HMPREF0868_1114 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475400.1 641562 D 699246 CDS YP_003475399.1 289450244 8810324 641753..642367 1 NC_013895.2 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase domain-containing protein 642367 8810324 HMPREF0868_1113 Clostridiales genomosp. BVAB3 str. UPII9-5 methyltransferase domain-containing protein YP_003475399.1 641753 D 699246 CDS YP_003475398.1 289449726 8810098 642401..642556 1 NC_013895.2 hypothetical protein 642556 8810098 HMPREF0868_1112 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475398.1 642401 D 699246 CDS YP_003475397.1 289449507 8810762 complement(642760..642879) 1 NC_013895.2 hypothetical protein 642879 8810762 HMPREF0868_1111 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475397.1 642760 R 699246 CDS YP_003475396.1 289450155 8810645 complement(642940..643659) 1 NC_013895.2 hypothetical protein 643659 8810645 HMPREF0868_1110 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475396.1 642940 R 699246 CDS YP_003475395.1 289450041 8811365 complement(644027..644350) 1 NC_013895.2 hypothetical protein 644350 8811365 HMPREF0868_1109 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475395.1 644027 R 699246 CDS YP_003475394.1 289450741 8811050 complement(644527..644961) 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 644961 8811050 HMPREF0868_1108 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003475394.1 644527 R 699246 CDS YP_003475393.1 289450436 8810210 645130..646053 1 NC_013895.2 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 646053 8810210 HMPREF0868_1107 Clostridiales genomosp. BVAB3 str. UPII9-5 radical SAM domain-containing protein YP_003475393.1 645130 D 699246 CDS YP_003475392.1 289449617 8810442 646338..647171 1 NC_013895.2 identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 647171 thiD_1 8810442 thiD_1 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphomethylpyrimidine kinase YP_003475392.1 646338 D 699246 CDS YP_003475391.1 289449841 8811162 647173..648366 1 NC_013895.2 identified by match to protein family HMM PF02133; match to protein family HMM TIGR02358; putative hydroxymethylpyrimidine transporter CytX 648366 8811162 HMPREF0868_1104 Clostridiales genomosp. BVAB3 str. UPII9-5 putative hydroxymethylpyrimidine transporter CytX YP_003475391.1 647173 D 699246 CDS YP_003475390.1 289450545 8811364 complement(648579..648722) 1 NC_013895.2 hypothetical protein 648722 8811364 HMPREF0868_1103 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475390.1 648579 R 699246 CDS YP_003475389.1 289450740 8810325 648679..650784 1 NC_013895.2 hypothetical protein 650784 8810325 HMPREF0868_1102 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475389.1 648679 D 699246 CDS YP_003475388.1 289449727 8810672 650762..653305 1 NC_013895.2 hypothetical protein 653305 8810672 HMPREF0868_1100 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475388.1 650762 D 699246 CDS YP_003475387.1 289450067 8811530 complement(653285..654268) 1 NC_013895.2 identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein 654268 8811530 HMPREF0868_1101 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyltransferase group 2 family protein YP_003475387.1 653285 R 699246 CDS YP_003475386.1 289450200 8811056 654808..655194 1 NC_013895.2 methylglyoxal synthase family protein 655194 8811056 HMPREF0868_1098 Clostridiales genomosp. BVAB3 str. UPII9-5 methylglyoxal synthase family protein YP_003475386.1 654808 D 699246 CDS YP_003475385.1 289450442 8810105 655487..656518 1 NC_013895.2 identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanine--tRNA ligase subunit alpha 656518 pheS 8810105 pheS Clostridiales genomosp. BVAB3 str. UPII9-5 phenylalanine--tRNA ligase subunit alpha YP_003475385.1 655487 D 699246 CDS YP_003475384.1 289449513 8810625 656530..658977 1 NC_013895.2 identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanine--tRNA ligase subunit beta 658977 pheT 8810625 pheT Clostridiales genomosp. BVAB3 str. UPII9-5 phenylalanine--tRNA ligase subunit beta YP_003475384.1 656530 D 699246 CDS YP_003475383.1 289450021 8811230 659247..659519 1 NC_013895.2 hypothetical protein 659519 8811230 HMPREF0868_1094 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475383.1 659247 D 699246 CDS YP_003475382.1 289450613 8811164 659503..660861 1 NC_013895.2 hypothetical protein 660861 8811164 HMPREF0868_1093 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475382.1 659503 D 699246 CDS YP_003475381.1 289450547 8810462 660836..661840 1 NC_013895.2 hypothetical protein 661840 8810462 HMPREF0868_1092 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475381.1 660836 D 699246 CDS YP_003475380.1 289449861 8811516 661979..664789 1 NC_013895.2 identified by match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; preprotein translocase subunit SecA 664789 secA 8811516 secA Clostridiales genomosp. BVAB3 str. UPII9-5 preprotein translocase subunit SecA YP_003475380.1 661979 D 699246 CDS YP_003475379.1 289450357 8810279 665308..665688 1 NC_013895.2 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 665688 8810279 HMPREF0868_1089 Clostridiales genomosp. BVAB3 str. UPII9-5 GntR family transcriptional regulator YP_003475379.1 665308 D 699246 CDS YP_003475378.1 289449683 8810229 665663..666586 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 666586 8810229 HMPREF0868_1088 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475378.1 665663 D 699246 CDS YP_003475377.1 289449634 8810778 666635..668458 1 NC_013895.2 hypothetical protein 668458 8810778 HMPREF0868_1087 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475377.1 666635 D 699246 CDS YP_003475376.1 289450171 8810057 complement(668578..669003) 1 NC_013895.2 identified by match to protein family HMM PF00293; NUDIX family hydrolase 669003 8810057 HMPREF0868_1086 Clostridiales genomosp. BVAB3 str. UPII9-5 NUDIX family hydrolase YP_003475376.1 668578 R 699246 CDS YP_003475375.1 289449466 8810934 complement(669281..669856) 1 NC_013895.2 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01744; xanthine phosphoribosyltransferase 669856 xpt 8810934 xpt Clostridiales genomosp. BVAB3 str. UPII9-5 xanthine phosphoribosyltransferase YP_003475375.1 669281 R 699246 CDS YP_003475374.1 289450322 8810509 complement(669843..671270) 1 NC_013895.2 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine permease 671270 pbuX 8810509 pbuX Clostridiales genomosp. BVAB3 str. UPII9-5 xanthine permease YP_003475374.1 669843 R 699246 CDS YP_003475373.1 289449907 8811195 671771..673417 1 NC_013895.2 identified by match to protein family HMM PF00496; putative glutathione-binding protein GsiB 673417 8811195 HMPREF0868_1083 Clostridiales genomosp. BVAB3 str. UPII9-5 putative glutathione-binding protein GsiB YP_003475373.1 671771 D 699246 CDS YP_003475372.1 289450578 8810292 673592..674512 1 NC_013895.2 identified by match to protein family HMM PF00528; glutathione ABC transporter permease GsiC 674512 gsiC 8810292 gsiC Clostridiales genomosp. BVAB3 str. UPII9-5 glutathione ABC transporter permease GsiC YP_003475372.1 673592 D 699246 CDS YP_003475371.1 289449696 8811190 674523..675485 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 675485 8811190 HMPREF0868_1081 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475371.1 674523 D 699246 CDS YP_003475370.1 289450573 8810881 675495..676496 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 676496 8810881 HMPREF0868_1080 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475370.1 675495 D 699246 CDS YP_003475369.1 289450270 8810688 676501..677475 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 677475 8810688 HMPREF0868_1079 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475369.1 676501 D 699246 CDS YP_003475368.1 289450083 8811149 677580..678884 1 NC_013895.2 identified by match to protein family HMM PF01120; alpha-L-fucosidase 678884 8811149 HMPREF0868_1078 Clostridiales genomosp. BVAB3 str. UPII9-5 alpha-L-fucosidase YP_003475368.1 677580 D 699246 CDS YP_003475367.1 289450533 8810472 679009..679794 1 NC_013895.2 identified by match to protein family HMM PF03932; CutC family protein 679794 8810472 HMPREF0868_1077 Clostridiales genomosp. BVAB3 str. UPII9-5 CutC family protein YP_003475367.1 679009 D 699246 CDS YP_003475366.1 289449871 8811046 679899..682637 1 NC_013895.2 identified by match to protein family HMM PF01841; transglutaminase-like protein 682637 8811046 HMPREF0868_1076 Clostridiales genomosp. BVAB3 str. UPII9-5 transglutaminase-like protein YP_003475366.1 679899 D 699246 CDS YP_003475365.1 289450432 8810953 682719..683711 1 NC_013895.2 identified by match to protein family HMM PF00958; match to protein family HMM PF06508; match to protein family HMM TIGR00884; GMP synthase family protein 683711 8810953 HMPREF0868_1075 Clostridiales genomosp. BVAB3 str. UPII9-5 GMP synthase family protein YP_003475365.1 682719 D 699246 CDS YP_003475364.1 289450341 8810658 683824..683964 1 NC_013895.2 hypothetical protein 683964 8810658 HMPREF0868_1074 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475364.1 683824 D 699246 CDS YP_003475363.1 289450053 8810777 complement(684154..685188) 1 NC_013895.2 identified by match to protein family HMM PF03601; hypothetical protein 685188 8810777 HMPREF0868_1073 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475363.1 684154 R 699246 CDS YP_003475362.1 289450170 8811242 685293..686168 1 NC_013895.2 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 686168 8811242 HMPREF0868_1072 Clostridiales genomosp. BVAB3 str. UPII9-5 LysR substrate binding domain-containing protein YP_003475362.1 685293 D 699246 CDS YP_003933639.1 308513236 8810419 686639..689314 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05738; match to protein family HMM TIGR01376; LPXTG-motif cell wall anchor domain-containing protein 689314 8810419 HMPREF0868_1071 Clostridiales genomosp. BVAB3 str. UPII9-5 LPXTG-motif cell wall anchor domain-containing protein YP_003933639.1 686639 D 699246 CDS YP_003475361.1 289449820 8811436 689474..689773 1 NC_013895.2 hypothetical protein 689773 8811436 HMPREF0868_1070 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475361.1 689474 D 699246 CDS YP_003933640.1 308513237 8810536 689807..690151 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 690151 8810536 HMPREF0868_1069 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933640.1 689807 D 699246 CDS YP_003933641.1 308513238 8810805 690290..690625 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 690625 8810805 HMPREF0868_1068 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933641.1 690290 D 699246 CDS YP_003475360.1 289450197 8811504 690896..692197 1 NC_013895.2 identified by match to protein family HMM PF00999; transporter, CPA2 family 692197 8811504 HMPREF0868_1067 Clostridiales genomosp. BVAB3 str. UPII9-5 transporter, CPA2 family YP_003475360.1 690896 D 699246 CDS YP_003475359.1 289450871 8810991 692298..693875 1 NC_013895.2 identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM PF06508; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase 693875 guaA 8810991 guaA Clostridiales genomosp. BVAB3 str. UPII9-5 GMP synthase YP_003475359.1 692298 D 699246 CDS YP_003475358.1 289450377 8810167 complement(694415..694645) 1 NC_013895.2 hypothetical protein 694645 8810167 HMPREF0868_1065 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475358.1 694415 R 699246 CDS YP_003475357.1 289449575 8811057 complement(694740..694922) 1 NC_013895.2 hypothetical protein 694922 8811057 HMPREF0868_1064 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475357.1 694740 R 699246 CDS YP_003475356.1 289450443 8810220 695098..695307 1 NC_013895.2 hypothetical protein 695307 8810220 HMPREF0868_1063 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475356.1 695098 D 699246 CDS YP_003933642.1 308513239 8810880 695372..695506 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 695506 8810880 HMPREF0868_1062 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933642.1 695372 D 699246 CDS YP_003933643.1 308513240 8811464 695543..695680 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 695680 8811464 HMPREF0868_1061 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933643.1 695543 D 699246 CDS YP_003933644.1 308513241 8810559 695690..695998 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Fic domain-containing toxin-antitoxin system toxin protein 695998 8810559 HMPREF0868_1060 Clostridiales genomosp. BVAB3 str. UPII9-5 Fic domain-containing toxin-antitoxin system toxin protein YP_003933644.1 695690 D 699246 CDS YP_003475355.1 289449955 8811280 696179..698113 1 NC_013895.2 hypothetical protein 698113 8811280 HMPREF0868_1059 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475355.1 696179 D 699246 CDS YP_003475354.1 289450658 8811085 complement(698554..699099) 1 NC_013895.2 identified by match to protein family HMM PF00255; glutathione peroxidase 699099 8811085 HMPREF0868_1058 Clostridiales genomosp. BVAB3 str. UPII9-5 glutathione peroxidase YP_003475354.1 698554 R 699246 CDS YP_003475353.1 289450471 8810413 complement(699577..700653) 1 NC_013895.2 hypothetical protein 700653 8810413 HMPREF0868_1057 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475353.1 699577 R 699246 CDS YP_003475352.1 289449814 8811330 complement(700646..701215) 1 NC_013895.2 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 701215 8811330 HMPREF0868_1056 Clostridiales genomosp. BVAB3 str. UPII9-5 TetR family transcriptional regulator YP_003475352.1 700646 R 699246 CDS YP_003475351.1 289450706 8810374 701457..703196 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 703196 8810374 HMPREF0868_1055 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475351.1 701457 D 699246 CDS YP_003475350.1 289449776 8811535 703186..704841 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 704841 8811535 HMPREF0868_1054 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475350.1 703186 D 699246 CDS YP_003475349.1 289450639 8810701 complement(705229..705633) 1 NC_013895.2 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 705633 8810701 HMPREF0868_1052 Clostridiales genomosp. BVAB3 str. UPII9-5 pyridoxamine 5'-phosphate oxidase family protein YP_003475349.1 705229 R 699246 CDS YP_003475348.1 289450096 8810872 complement(705855..706709) 1 NC_013895.2 identified by match to protein family HMM PF01408; match to protein family HMM PF03446; match to protein family HMM PF03807; phosphogluconate dehydrogenase (decarboxylating), NAD binding domain-containing protein 706709 8810872 HMPREF0868_1051 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphogluconate dehydrogenase (decarboxylating), NAD binding domain-containing protein YP_003475348.1 705855 R 699246 CDS YP_003475347.1 289450263 8809983 706877..708331 1 NC_013895.2 identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 708331 8809983 HMPREF0868_1050 Clostridiales genomosp. BVAB3 str. UPII9-5 sodium:neurotransmitter symporter family protein YP_003475347.1 706877 D 699246 CDS YP_003475346.1 289449397 8811093 complement(708435..710015) 1 NC_013895.2 identified by match to protein family HMM PF00999; match to protein family HMM PF02080; TrkA C-terminal domain-containing protein 710015 8811093 HMPREF0868_1049 Clostridiales genomosp. BVAB3 str. UPII9-5 TrkA C-terminal domain-containing protein YP_003475346.1 708435 R 699246 CDS YP_003475345.1 289450479 8810226 710191..713406 1 NC_013895.2 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucine--tRNA ligase 713406 ileS 8810226 ileS Clostridiales genomosp. BVAB3 str. UPII9-5 isoleucine--tRNA ligase YP_003475345.1 710191 D 699246 CDS YP_003475344.1 289449631 8810348 713409..714119 1 NC_013895.2 identified by match to protein family HMM PF02163; M50 family peptidase 714119 8810348 HMPREF0868_1047 Clostridiales genomosp. BVAB3 str. UPII9-5 M50 family peptidase YP_003475344.1 713409 D 699246 CDS YP_003475343.1 289449750 8811384 714119..714931 1 NC_013895.2 identified by match to protein family HMM PF02616; ScpA/B protein 714931 8811384 HMPREF0868_1046 Clostridiales genomosp. BVAB3 str. UPII9-5 ScpA/B protein YP_003475343.1 714119 D 699246 CDS YP_003475342.1 289450759 8810667 714924..715544 1 NC_013895.2 identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 715544 scpB 8810667 scpB Clostridiales genomosp. BVAB3 str. UPII9-5 segregation and condensation protein B YP_003475342.1 714924 D 699246 CDS YP_003475341.1 289450062 8811113 715553..716236 1 NC_013895.2 identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 716236 cmk 8811113 cmk Clostridiales genomosp. BVAB3 str. UPII9-5 cytidylate kinase YP_003475341.1 715553 D 699246 CDS YP_003475340.1 289450498 8810017 716214..717008 1 NC_013895.2 hypothetical protein 717008 8810017 HMPREF0868_1043 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475340.1 716214 D 699246 CDS YP_003475339.1 289449430 8810212 716989..719103 1 NC_013895.2 identified by match to protein family HMM PF00575; match to protein family HMM PF02401; match to protein family HMM TIGR00216; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 719103 ispH 8810212 ispH Clostridiales genomosp. BVAB3 str. UPII9-5 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_003475339.1 716989 D 699246 CDS YP_003475338.1 289449619 8811121 complement(719304..720623) 1 NC_013895.2 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887; putative dipeptidase PepV 720623 8811121 HMPREF0868_1041 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dipeptidase PepV YP_003475338.1 719304 R 699246 CDS YP_003475337.1 289450506 8810636 720841..721434 1 NC_013895.2 identified by match to protein family HMM PF02915; rubrerythrin 721434 rbr 8810636 rbr Clostridiales genomosp. BVAB3 str. UPII9-5 rubrerythrin YP_003475337.1 720841 D 699246 CDS YP_003475336.1 289450032 8811297 721641..721853 1 NC_013895.2 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain-containing protein 721853 8811297 HMPREF0868_1039 Clostridiales genomosp. BVAB3 str. UPII9-5 cold-shock DNA-binding domain-containing protein YP_003475336.1 721641 D 699246 CDS YP_003475335.1 289450675 8811453 complement(721947..722669) 1 NC_013895.2 identified by match to protein family HMM PF00005; arginine ABC transporter ATP-binding protein ArtM 722669 artM 8811453 artM Clostridiales genomosp. BVAB3 str. UPII9-5 arginine ABC transporter ATP-binding protein ArtM YP_003475335.1 721947 R 699246 CDS YP_003475334.1 289450823 8810484 complement(722653..723342) 1 NC_013895.2 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; putative arginine ABC transporter permease ArtQ 723342 8810484 HMPREF0868_1037 Clostridiales genomosp. BVAB3 str. UPII9-5 putative arginine ABC transporter permease ArtQ YP_003475334.1 722653 R 699246 CDS YP_003475333.1 289449883 8810046 complement(723415..724320) 1 NC_013895.2 identified by match to protein family HMM PF00497; arginine ABC transporter periplasmic arginine-binding protein ArtP family protein 724320 8810046 HMPREF0868_1036 Clostridiales genomosp. BVAB3 str. UPII9-5 arginine ABC transporter periplasmic arginine-binding protein ArtP family protein YP_003475333.1 723415 R 699246 CDS YP_003475332.1 289449456 8811526 724577..725176 1 NC_013895.2 identified by match to protein family HMM PF01569; PAP2 family protein 725176 8811526 HMPREF0868_1035 Clostridiales genomosp. BVAB3 str. UPII9-5 PAP2 family protein YP_003475332.1 724577 D 699246 CDS YP_003475331.1 289450175 8811524 725486..726472 1 NC_013895.2 hypothetical protein 726472 8811524 HMPREF0868_1032 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475331.1 725486 D 699246 CDS YP_003475330.1 289450714 8810044 complement(726825..728393) 1 NC_013895.2 identified by match to protein family HMM PF03577; dipeptidase 728393 pepD_2 8810044 pepD_2 Clostridiales genomosp. BVAB3 str. UPII9-5 dipeptidase YP_003475330.1 726825 R 699246 CDS YP_003475329.1 289449454 8811294 728600..728986 1 NC_013895.2 identified by match to protein family HMM PF03960; ArsC family protein 728986 8811294 HMPREF0868_1029 Clostridiales genomosp. BVAB3 str. UPII9-5 ArsC family protein YP_003475329.1 728600 D 699246 CDS YP_003475328.1 289450672 8810386 729027..729857 1 NC_013895.2 hypothetical protein 729857 8810386 HMPREF0868_1028 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475328.1 729027 D 699246 CDS YP_003475327.1 289449788 8810467 complement(729925..730425) 1 NC_013895.2 GAF domain-containing protein 730425 8810467 HMPREF0868_1027 Clostridiales genomosp. BVAB3 str. UPII9-5 GAF domain-containing protein YP_003475327.1 729925 R 699246 CDS YP_003475326.1 289449866 8811135 730575..731960 1 NC_013895.2 identified by match to protein family HMM PF00349; match to protein family HMM PF03727; hexokinase 731960 8811135 HMPREF0868_1026 Clostridiales genomosp. BVAB3 str. UPII9-5 hexokinase YP_003475326.1 730575 D 699246 CDS YP_003475325.1 289450519 8809980 731997..732947 1 NC_013895.2 hypothetical protein 732947 8809980 HMPREF0868_1025 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475325.1 731997 D 699246 CDS YP_003475324.1 289449394 8811491 733285..733545 1 NC_013895.2 hypothetical protein 733545 8811491 HMPREF0868_1024 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475324.1 733285 D 699246 CDS YP_003475323.1 289450859 8810160 733608..733901 1 NC_013895.2 identified by match to protein family HMM PF01479; S4 domain-containing protein 733901 8810160 HMPREF0868_1023 Clostridiales genomosp. BVAB3 str. UPII9-5 S4 domain-containing protein YP_003475323.1 733608 D 699246 CDS YP_003475322.1 289449568 8810894 733891..734211 1 NC_013895.2 identified by match to protein family HMM PF04977; septum formation initiator 734211 8810894 HMPREF0868_1022 Clostridiales genomosp. BVAB3 str. UPII9-5 septum formation initiator YP_003475322.1 733891 D 699246 CDS YP_003475321.1 289450283 8810713 complement(734254..734856) 1 NC_013895.2 identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR 734856 recR 8810713 recR Clostridiales genomosp. BVAB3 str. UPII9-5 recombination protein RecR YP_003475321.1 734254 R 699246 CDS YP_003475320.1 289450108 8810765 complement(734856..735212) 1 NC_013895.2 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; YbaB/EbfC family DNA-binding protein 735212 8810765 HMPREF0868_1020 Clostridiales genomosp. BVAB3 str. UPII9-5 YbaB/EbfC family DNA-binding protein YP_003475320.1 734856 R 699246 CDS YP_003475319.1 289450158 8811559 complement(735214..737052) 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III subunit gamma and tau 737052 dnaX 8811559 dnaX Clostridiales genomosp. BVAB3 str. UPII9-5 DNA polymerase III subunit gamma and tau YP_003475319.1 735214 R 699246 CDS YP_003475318.1 289450813 8810933 complement(737251..738699) 1 NC_013895.2 identified by match to protein family HMM PF01276; Orn/Lys/Arg decarboxylase, major domain-containing protein 738699 8810933 HMPREF0868_1017 Clostridiales genomosp. BVAB3 str. UPII9-5 Orn/Lys/Arg decarboxylase, major domain-containing protein YP_003475318.1 737251 R 699246 CDS YP_003475317.1 289450321 8810247 complement(738701..739261) 1 NC_013895.2 hypothetical protein 739261 8810247 HMPREF0868_1016 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475317.1 738701 R 699246 CDS YP_003475316.1 289449651 8809976 739417..740055 1 NC_013895.2 identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; dTMP kinase 740055 tmk 8809976 tmk Clostridiales genomosp. BVAB3 str. UPII9-5 dTMP kinase YP_003475316.1 739417 D 699246 CDS YP_003475315.1 289449390 8810885 740052..740381 1 NC_013895.2 identified by match to protein family HMM PF06153; hypothetical protein 740381 8810885 HMPREF0868_1014 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475315.1 740052 D 699246 CDS YP_003475314.1 289450274 8810253 740390..741439 1 NC_013895.2 hypothetical protein 741439 8810253 HMPREF0868_1013 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475314.1 740390 D 699246 CDS YP_003475313.1 289449657 8811145 741432..742709 1 NC_013895.2 identified by match to protein family HMM PF04468; PSP1 C-terminal domain-containing protein 742709 8811145 HMPREF0868_1012 Clostridiales genomosp. BVAB3 str. UPII9-5 PSP1 C-terminal domain-containing protein YP_003475313.1 741432 D 699246 CDS YP_003475312.1 289450529 8811138 742872..743042 1 NC_013895.2 identified by match to protein family HMM PF00037; ferredoxin 743042 fer 8811138 fer Clostridiales genomosp. BVAB3 str. UPII9-5 ferredoxin YP_003475312.1 742872 D 699246 CDS YP_003475311.1 289450522 8810669 743182..744069 1 NC_013895.2 hypothetical protein 744069 8810669 HMPREF0868_1010 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475311.1 743182 D 699246 CDS YP_003475310.1 289450064 8811476 744092..745060 1 NC_013895.2 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; YraL family S-adenosylmethionine-dependent methyltransferase 745060 8811476 HMPREF0868_1009 Clostridiales genomosp. BVAB3 str. UPII9-5 YraL family S-adenosylmethionine-dependent methyltransferase YP_003475310.1 744092 D 699246 CDS YP_003475309.1 289450845 8810522 745118..748303 1 NC_013895.2 identified by match to protein family HMM PF09586; membrane protein 748303 yfhO 8810522 yfhO Clostridiales genomosp. BVAB3 str. UPII9-5 membrane protein YP_003475309.1 745118 D 699246 CDS YP_003475308.1 289449919 8811416 748405..748839 1 NC_013895.2 identified by match to protein family HMM PF00572; match to protein family HMM TIGR01066; 50S ribosomal protein L13 748839 rplM 8811416 rplM Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L13 YP_003475308.1 748405 D 699246 CDS YP_003475307.1 289450789 8810680 748854..749258 1 NC_013895.2 identified by match to protein family HMM PF00380; 30S ribosomal protein S9 749258 rpsI 8810680 rpsI Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S9 YP_003475307.1 748854 D 699246 CDS YP_003475306.1 289450075 8810835 749313..749888 1 NC_013895.2 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 749888 8810835 HMPREF0868_1005 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475306.1 749313 D 699246 CDS YP_003475305.1 289450227 8810059 749892..750572 1 NC_013895.2 identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725; universal bacterial protein YeaZ 750572 yeaZ 8810059 yeaZ Clostridiales genomosp. BVAB3 str. UPII9-5 universal bacterial protein YeaZ YP_003475305.1 749892 D 699246 CDS YP_003475304.1 289449468 8810040 750565..751188 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 751188 8810040 HMPREF0868_1003 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003475304.1 750565 D 699246 CDS YP_003475303.1 289449450 8811117 751263..751526 1 NC_013895.2 identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier, HPr family 751526 8811117 HMPREF0868_1002 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphocarrier, HPr family YP_003475303.1 751263 D 699246 CDS YP_003475302.1 289450502 8811204 751541..753493 1 NC_013895.2 identified by match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 753493 uvrC 8811204 uvrC Clostridiales genomosp. BVAB3 str. UPII9-5 excinuclease ABC subunit C YP_003475302.1 751541 D 699246 CDS YP_003475301.1 289450587 8811000 753507..754241 1 NC_013895.2 identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 754241 8811000 HMPREF0868_1000 Clostridiales genomosp. BVAB3 str. UPII9-5 Ser/Thr phosphatase family protein YP_003475301.1 753507 D 699246 CDS YP_003475300.1 289450386 8811266 754431..754745 1 NC_013895.2 identified by match to protein family HMM PF01022; putative arsenical resistance operon repressor 754745 8811266 HMPREF0868_0999 Clostridiales genomosp. BVAB3 str. UPII9-5 putative arsenical resistance operon repressor YP_003475300.1 754431 D 699246 CDS YP_003475299.1 289450646 8810394 754718..755209 1 NC_013895.2 identified by match to protein family HMM PF06953; arsenical resistance operon trans-acting repressor ArsD 755209 arsD 8810394 arsD Clostridiales genomosp. BVAB3 str. UPII9-5 arsenical resistance operon trans-acting repressor ArsD YP_003475299.1 754718 D 699246 CDS YP_003475298.1 289449796 8810737 755285..756847 1 NC_013895.2 identified by match to protein family HMM PF00654; match to protein family HMM PF02080; ClC family chloride transporter 756847 8810737 HMPREF0868_0997 Clostridiales genomosp. BVAB3 str. UPII9-5 ClC family chloride transporter YP_003475298.1 755285 D 699246 CDS YP_003475297.1 289450132 8811546 756854..756970 1 NC_013895.2 hypothetical protein 756970 8811546 HMPREF0868_0996 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475297.1 756854 D 699246 CDS YP_003475296.1 289450030 8810398 757217..757354 1 NC_013895.2 hypothetical protein 757354 8810398 HMPREF0868_0994 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475296.1 757217 D 699246 CDS YP_003475295.1 289449800 8810297 757347..758927 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 758927 8810297 HMPREF0868_0993 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003475295.1 757347 D 699246 CDS YP_003475294.1 289449701 8810673 758960..759922 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 759922 8810673 HMPREF0868_0992 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475294.1 758960 D 699246 CDS YP_003475293.1 289450068 8811358 759915..760745 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 760745 8811358 HMPREF0868_0991 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475293.1 759915 D 699246 CDS YP_003475292.1 289450734 8810052 760738..761784 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 761784 8810052 HMPREF0868_0990 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475292.1 760738 D 699246 CDS YP_003933645.1 308513242 8810151 761781..762557 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 762557 8810151 HMPREF0868_0989 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003933645.1 761781 D 699246 CDS YP_003475291.1 289449559 8810734 762611..763360 1 NC_013895.2 identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 763360 gpmA 8810734 gpmA Clostridiales genomosp. BVAB3 str. UPII9-5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase YP_003475291.1 762611 D 699246 CDS YP_003475290.1 289450129 8810018 763631..763951 1 NC_013895.2 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 763951 8810018 HMPREF0868_0987 Clostridiales genomosp. BVAB3 str. UPII9-5 PadR family transcriptional regulator YP_003475290.1 763631 D 699246 CDS YP_003475289.1 289449431 8811001 763944..764612 1 NC_013895.2 hypothetical protein 764612 8811001 HMPREF0868_0986 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475289.1 763944 D 699246 CDS YP_003475288.1 289450387 8811340 764609..765472 1 NC_013895.2 putative lipoprotein 765472 8811340 HMPREF0868_0985 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475288.1 764609 D 699246 CDS YP_003475287.1 289450716 8810269 complement(765561..766766) 1 NC_013895.2 identified by match to protein family HMM PF00375; dicarboxylate/amino acid:cation Na+/H+ symporter family protein 766766 8810269 HMPREF0868_0984 Clostridiales genomosp. BVAB3 str. UPII9-5 dicarboxylate/amino acid:cation Na+/H+ symporter family protein YP_003475287.1 765561 R 699246 CDS YP_003475286.1 289449673 8811168 complement(766882..768066) 1 NC_013895.2 hypothetical protein 768066 8811168 HMPREF0868_0983 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475286.1 766882 R 699246 CDS YP_003475285.1 289450551 8810021 complement(768067..769014) 1 NC_013895.2 identified by match to protein family HMM PF02588; hypothetical protein 769014 8810021 HMPREF0868_0982 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475285.1 768067 R 699246 CDS YP_003475284.1 289449434 8810936 769306..770934 1 NC_013895.2 identified by match to protein family HMM PF01546; M20/M25/M40 family peptidase 770934 8810936 HMPREF0868_0981 Clostridiales genomosp. BVAB3 str. UPII9-5 M20/M25/M40 family peptidase YP_003475284.1 769306 D 699246 CDS YP_003475283.1 289450324 8811446 771094..771510 1 NC_013895.2 identified by match to protein family HMM PF00258; putative flavodoxin 771510 8811446 HMPREF0868_0980 Clostridiales genomosp. BVAB3 str. UPII9-5 putative flavodoxin YP_003475283.1 771094 D 699246 CDS YP_003475282.1 289450816 8810890 771712..777327 1 NC_013895.2 identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; PA domain-containing protein 777327 8810890 HMPREF0868_0979 Clostridiales genomosp. BVAB3 str. UPII9-5 PA domain-containing protein YP_003475282.1 771712 D 699246 CDS YP_003475281.1 289450279 8811529 complement(777407..778333) 1 NC_013895.2 identified by match to protein family HMM PF00561; match to protein family HMM TIGR01249; prolyl aminopeptidase 778333 pip 8811529 pip Clostridiales genomosp. BVAB3 str. UPII9-5 prolyl aminopeptidase YP_003475281.1 777407 R 699246 CDS YP_003475280.1 289449816 8811267 complement(778716..779567) 1 NC_013895.2 hypothetical protein 779567 8811267 HMPREF0868_0975 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475280.1 778716 R 699246 CDS YP_003475279.1 289450647 8810523 779785..781773 1 NC_013895.2 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; DNA gyrase subunit B, C-terminal domain-containing protein 781773 8810523 HMPREF0868_0974 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA gyrase subunit B, C-terminal domain-containing protein YP_003475279.1 779785 D 699246 CDS YP_003475278.1 289449920 8810637 781787..783970 1 NC_013895.2 identified by match to protein family HMM PF00521; DNA gyrase/topoisomerase IV subunit A 783970 8810637 HMPREF0868_0973 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA gyrase/topoisomerase IV subunit A YP_003475278.1 781787 D 699246 CDS YP_003475277.1 289450033 8810891 784014..785939 1 NC_013895.2 hypothetical protein 785939 8810891 HMPREF0868_0972 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475277.1 784014 D 699246 CDS YP_003475276.1 289450280 8810075 complement(786051..787406) 1 NC_013895.2 identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; aspartate kinase 787406 8810075 HMPREF0868_0971 Clostridiales genomosp. BVAB3 str. UPII9-5 aspartate kinase YP_003475276.1 786051 R 699246 CDS YP_003475275.1 289449484 8811132 787622..788320 1 NC_013895.2 identified by match to protein family HMM PF09419; match to protein family HMM TIGR01662; match to protein family HMM TIGR01668; HAD phosphatase 788320 8811132 HMPREF0868_0970 Clostridiales genomosp. BVAB3 str. UPII9-5 HAD phosphatase YP_003475275.1 787622 D 699246 CDS YP_003475274.1 289450516 8811156 788549..789649 1 NC_013895.2 identified by match to protein family HMM PF00557; match to protein family HMM PF01321; putative Xaa-Pro dipeptidase 789649 8811156 HMPREF0868_0969 Clostridiales genomosp. BVAB3 str. UPII9-5 putative Xaa-Pro dipeptidase YP_003475274.1 788549 D 699246 CDS YP_003475273.1 289450539 8811024 complement(789665..789787) 1 NC_013895.2 hypothetical protein 789787 8811024 HMPREF0868_0968 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475273.1 789665 R 699246 CDS YP_003475272.1 289450410 8810171 789774..791048 1 NC_013895.2 identified by match to protein family HMM PF02355; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129; export membrane protein SecD 791048 secD 8810171 secD Clostridiales genomosp. BVAB3 str. UPII9-5 export membrane protein SecD YP_003475272.1 789774 D 699246 CDS YP_003933646.1 308513243 8810847 791045..792001 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02355; match to protein family HMM TIGR00966; export membrane protein SecF 792001 secF 8810847 secF Clostridiales genomosp. BVAB3 str. UPII9-5 export membrane protein SecF YP_003933646.1 791045 D 699246 CDS YP_003475271.1 289450239 8809954 792102..793355 1 NC_013895.2 identified by match to protein family HMM TIGR00268; hypothetical protein 793355 8809954 HMPREF0868_0965 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475271.1 792102 D 699246 CDS YP_003475270.1 289449370 8811430 complement(793482..794348) 1 NC_013895.2 identified by match to protein family HMM PF01680; match to protein family HMM TIGR00343; pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 794348 8811430 HMPREF0868_0964 Clostridiales genomosp. BVAB3 str. UPII9-5 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_003475270.1 793482 R 699246 CDS YP_003475269.1 289450802 8810538 794522..796084 1 NC_013895.2 identified by match to protein family HMM PF00013; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR03319; hypothetical protein 796084 8810538 HMPREF0868_0963 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475269.1 794522 D 699246 CDS YP_003475268.1 289449934 8811508 796215..797000 1 NC_013895.2 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00282; putative metallophosphoesterase 797000 8811508 HMPREF0868_0962 Clostridiales genomosp. BVAB3 str. UPII9-5 putative metallophosphoesterase YP_003475268.1 796215 D 699246 CDS YP_003475267.1 289450874 8810457 797025..797510 1 NC_013895.2 identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077; signal peptidase II 797510 lspA 8810457 lspA Clostridiales genomosp. BVAB3 str. UPII9-5 signal peptidase II YP_003475267.1 797025 D 699246 CDS YP_003475266.1 289449856 8810117 797482..798441 1 NC_013895.2 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; putative ribosomal large subunit pseudouridine synthase D 798441 8810117 HMPREF0868_0960 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribosomal large subunit pseudouridine synthase D YP_003475266.1 797482 D 699246 CDS YP_003475265.1 289449525 8810539 798438..799484 1 NC_013895.2 identified by match to protein family HMM PF02562; PhoH family protein 799484 8810539 HMPREF0868_0959 Clostridiales genomosp. BVAB3 str. UPII9-5 PhoH family protein YP_003475265.1 798438 D 699246 CDS YP_003475264.1 289449935 8811320 799497..801644 1 NC_013895.2 identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; putative 7TM-HD extracellular 801644 8811320 HMPREF0868_0958 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 7TM-HD extracellular YP_003475264.1 799497 D 699246 CDS YP_003475263.1 289450697 8810425 801613..803304 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM PF02130; match to protein family HMM PF07650; match to protein family HMM TIGR00043; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; GTP-binding protein Era 803304 era 8810425 era Clostridiales genomosp. BVAB3 str. UPII9-5 GTP-binding protein Era YP_003475263.1 801613 D 699246 CDS YP_003475262.1 289449826 8810264 803317..804090 1 NC_013895.2 identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 804090 recO 8810264 recO Clostridiales genomosp. BVAB3 str. UPII9-5 DNA repair protein RecO YP_003475262.1 803317 D 699246 CDS YP_003475261.1 289449668 8810941 complement(804096..806576) 1 NC_013895.2 identified by match to protein family HMM PF06733; DEAD2 domain-containing protein 806576 8810941 HMPREF0868_0955 Clostridiales genomosp. BVAB3 str. UPII9-5 DEAD2 domain-containing protein YP_003475261.1 804096 R 699246 CDS YP_003475260.1 289450329 8810067 806680..808185 1 NC_013895.2 identified by match to protein family HMM PF00478; match to protein family HMM PF00571; inosine 5-monophosphate dehydrogenase 808185 8810067 HMPREF0868_0954 Clostridiales genomosp. BVAB3 str. UPII9-5 inosine 5-monophosphate dehydrogenase YP_003475260.1 806680 D 699246 CDS YP_003475259.1 289449476 8811359 808297..808779 1 NC_013895.2 identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 808779 greA 8811359 greA Clostridiales genomosp. BVAB3 str. UPII9-5 transcription elongation factor GreA YP_003475259.1 808297 D 699246 CDS YP_003475258.1 289450735 8810079 808788..810770 1 NC_013895.2 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF01588; match to protein family HMM TIGR00499; lysine--tRNA ligase 810770 lysS 8810079 lysS Clostridiales genomosp. BVAB3 str. UPII9-5 lysine--tRNA ligase YP_003475258.1 808788 D 699246 CDS YP_003475257.1 289449488 8810961 811272..813341 1 NC_013895.2 identified by match to protein family HMM PF07564; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 813341 8810961 HMPREF0868_0951 Clostridiales genomosp. BVAB3 str. UPII9-5 LPXTG-motif cell wall anchor domain-containing protein YP_003475257.1 811272 D 699246 CDS YP_003933647.1 308513244 8810236 813667..814131 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 814131 8810236 HMPREF0868_0950 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933647.1 813667 D 699246 CDS YP_003475256.1 289449640 8810820 814465..816741 1 NC_013895.2 identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 816741 8810820 HMPREF0868_0949 Clostridiales genomosp. BVAB3 str. UPII9-5 LPXTG-motif cell wall anchor domain-containing protein YP_003475256.1 814465 D 699246 CDS YP_003475255.1 289450212 8810307 817108..817251 1 NC_013895.2 hypothetical protein 817251 8810307 HMPREF0868_0948 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475255.1 817108 D 699246 CDS YP_003475254.1 289449710 8810984 complement(817392..818774) 1 NC_013895.2 identified by match to protein family HMM PF03553; match to protein family HMM TIGR00931; Na+/H+ antiporter NhaC 818774 nhaC_1 8810984 nhaC_1 Clostridiales genomosp. BVAB3 str. UPII9-5 Na+/H+ antiporter NhaC YP_003475254.1 817392 R 699246 CDS YP_003475253.1 289450370 8810671 818946..819074 1 NC_013895.2 hypothetical protein 819074 8810671 HMPREF0868_0946 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475253.1 818946 D 699246 CDS YP_003475252.1 289450066 8811354 819145..819933 1 NC_013895.2 identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 819933 rpsB 8811354 rpsB Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S2 YP_003475252.1 819145 D 699246 CDS YP_003475251.1 289450730 8810089 819989..820636 1 NC_013895.2 identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts 820636 tsf 8810089 tsf Clostridiales genomosp. BVAB3 str. UPII9-5 translation elongation factor Ts YP_003475251.1 819989 D 699246 CDS YP_003475250.1 289449498 8810834 820700..821407 1 NC_013895.2 identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; UMP kinase 821407 pyrH 8810834 pyrH Clostridiales genomosp. BVAB3 str. UPII9-5 UMP kinase YP_003475250.1 820700 D 699246 CDS YP_003475249.1 289450226 8811027 821480..822043 1 NC_013895.2 identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 822043 frr 8811027 frr Clostridiales genomosp. BVAB3 str. UPII9-5 ribosome recycling factor YP_003475249.1 821480 D 699246 CDS YP_003475248.1 289450413 8810146 822040..822825 1 NC_013895.2 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 822825 uppS 8810146 uppS Clostridiales genomosp. BVAB3 str. UPII9-5 di-trans,poly-cis-decaprenylcistransferase YP_003475248.1 822040 D 699246 CDS YP_003475247.1 289449554 8810473 822800..823669 1 NC_013895.2 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 823669 cdsA 8810473 cdsA Clostridiales genomosp. BVAB3 str. UPII9-5 phosphatidate cytidylyltransferase YP_003475247.1 822800 D 699246 CDS YP_003475246.1 289449872 8810417 823818..825038 1 NC_013895.2 identified by match to protein family HMM PF02670; match to protein family HMM PF08436; match to protein family HMM TIGR00243; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 825038 dxr 8810417 dxr Clostridiales genomosp. BVAB3 str. UPII9-5 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003475246.1 823818 D 699246 CDS YP_003475245.1 289449818 8810276 825035..826357 1 NC_013895.2 identified by match to protein family HMM PF02163; putative RIP metalloprotease RseP 826357 8810276 HMPREF0868_0938 Clostridiales genomosp. BVAB3 str. UPII9-5 putative RIP metalloprotease RseP YP_003475245.1 825035 D 699246 CDS YP_003475244.1 289449680 8811079 826363..827427 1 NC_013895.2 identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 827427 ispG 8811079 ispG Clostridiales genomosp. BVAB3 str. UPII9-5 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_003475244.1 826363 D 699246 CDS YP_003475243.1 289450465 8811434 827427..831914 1 NC_013895.2 identified by match to protein family HMM PF00929; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00573; match to protein family HMM TIGR01405; DNA polymerase III subunit alpha, Gram-positive type 831914 polC 8811434 polC Clostridiales genomosp. BVAB3 str. UPII9-5 DNA polymerase III subunit alpha, Gram-positive type YP_003475243.1 827427 D 699246 CDS YP_003475242.1 289450806 8810553 831951..834518 1 NC_013895.2 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595; primosomal protein N' 834518 priA 8810553 priA Clostridiales genomosp. BVAB3 str. UPII9-5 primosomal protein N' YP_003475242.1 831951 D 699246 CDS YP_003475241.1 289449949 8811313 834552..835034 1 NC_013895.2 identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 835034 def 8811313 def Clostridiales genomosp. BVAB3 str. UPII9-5 peptide deformylase YP_003475241.1 834552 D 699246 CDS YP_003475240.1 289450691 8811047 835117..836088 1 NC_013895.2 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 836088 fmt 8811047 fmt Clostridiales genomosp. BVAB3 str. UPII9-5 methionyl-tRNA formyltransferase YP_003475240.1 835117 D 699246 CDS YP_003475239.1 289450433 8810399 836090..837586 1 NC_013895.2 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; putative ribosomal RNA small subunit methyltransferase B 837586 8810399 HMPREF0868_0931 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribosomal RNA small subunit methyltransferase B YP_003475239.1 836090 D 699246 CDS YP_003475238.1 289449801 8809958 complement(837583..838689) 1 NC_013895.2 identified by match to protein family HMM PF02424; ApbE family protein 838689 8809958 HMPREF0868_0932 Clostridiales genomosp. BVAB3 str. UPII9-5 ApbE family protein YP_003475238.1 837583 R 699246 CDS YP_003475237.1 289449374 8810452 complement(838697..838954) 1 NC_013895.2 hypothetical protein 838954 8810452 HMPREF0868_0930 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475237.1 838697 R 699246 CDS YP_003475236.1 289449851 8811303 839082..839648 1 NC_013895.2 hypothetical protein 839648 8811303 HMPREF0868_0929 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475236.1 839082 D 699246 CDS YP_003475235.1 289450681 8810080 complement(839722..840270) 1 NC_013895.2 hypothetical protein 840270 8810080 HMPREF0868_0928 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475235.1 839722 R 699246 CDS YP_003475234.1 289449489 8811091 complement(840447..841334) 1 NC_013895.2 identified by match to protein family HMM PF05116; match to protein family HMM PF08282; HAD hydrolase 841334 8811091 HMPREF0868_0926 Clostridiales genomosp. BVAB3 str. UPII9-5 HAD hydrolase YP_003475234.1 840447 R 699246 CDS YP_003475233.1 289450477 8810879 complement(841327..842289) 1 NC_013895.2 hypothetical protein 842289 8810879 HMPREF0868_0925 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475233.1 841327 R 699246 CDS YP_003475232.1 289450269 8810347 842464..842721 1 NC_013895.2 identified by match to protein family HMM PF05768; glutaredoxin-like protein 842721 8810347 HMPREF0868_0924 Clostridiales genomosp. BVAB3 str. UPII9-5 glutaredoxin-like protein YP_003475232.1 842464 D 699246 CDS YP_003475231.1 289449749 8811534 842772..843470 1 NC_013895.2 identified by match to protein family HMM PF02397; sugar transferase 843470 8811534 HMPREF0868_0923 Clostridiales genomosp. BVAB3 str. UPII9-5 sugar transferase YP_003475231.1 842772 D 699246 CDS YP_003933648.1 308513245 8810648 843737..844294 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 844294 8810648 HMPREF0868_0921 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933648.1 843737 D 699246 CDS YP_003475230.1 289450043 8811158 844297..844530 1 NC_013895.2 hypothetical protein 844530 8811158 HMPREF0868_0919 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475230.1 844297 D 699246 CDS YP_003475229.1 289450541 8811332 complement(844490..844906) 1 NC_013895.2 hypothetical protein 844906 8811332 HMPREF0868_0920 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475229.1 844490 R 699246 CDS YP_003475228.1 289450708 8809999 845019..845522 1 NC_013895.2 identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC 845522 ruvC 8809999 ruvC Clostridiales genomosp. BVAB3 str. UPII9-5 crossover junction endodeoxyribonuclease RuvC YP_003475228.1 845019 D 699246 CDS YP_003475227.1 289449412 8811478 845604..846224 1 NC_013895.2 identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA 846224 ruvA 8811478 ruvA Clostridiales genomosp. BVAB3 str. UPII9-5 Holliday junction DNA helicase RuvA YP_003475227.1 845604 D 699246 CDS YP_003475226.1 289450847 8811458 846276..847394 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM PF00308; match to protein family HMM PF05491; match to protein family HMM PF07728; match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB 847394 ruvB 8811458 ruvB Clostridiales genomosp. BVAB3 str. UPII9-5 Holliday junction DNA helicase RuvB YP_003475226.1 846276 D 699246 CDS YP_003475225.1 289450828 8810556 847458..848141 1 NC_013895.2 identified by match to protein family HMM PF02677; hypothetical protein 848141 8810556 HMPREF0868_0915 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475225.1 847458 D 699246 CDS YP_003475224.1 289449952 8810848 complement(848172..850082) 1 NC_013895.2 identified by match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin-binding protein A 850082 fbpA 8810848 fbpA Clostridiales genomosp. BVAB3 str. UPII9-5 fibronectin-binding protein A YP_003475224.1 848172 R 699246 CDS YP_003475223.1 289450240 8809996 850342..850581 1 NC_013895.2 hypothetical protein 850581 8809996 HMPREF0868_0913 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475223.1 850342 D 699246 CDS YP_003475222.1 289449410 8811199 850601..851698 1 NC_013895.2 identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA-[protein]-cysteine S-methyltransferase 851698 8811199 HMPREF0868_0912 Clostridiales genomosp. BVAB3 str. UPII9-5 methylated-DNA-[protein]-cysteine S-methyltransferase YP_003475222.1 850601 D 699246 CDS YP_003475221.1 289450582 8810694 851682..852407 1 NC_013895.2 identified by match to protein family HMM PF01613; flavin reductase-like protein 852407 8810694 HMPREF0868_0911 Clostridiales genomosp. BVAB3 str. UPII9-5 flavin reductase-like protein YP_003475221.1 851682 D 699246 CDS YP_003475220.1 289450089 8811517 complement(852439..853008) 1 NC_013895.2 hypothetical protein 853008 8811517 HMPREF0868_0910 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475220.1 852439 R 699246 CDS YP_003475219.1 289450251 8810085 853644..855443 1 NC_013895.2 identified by match to protein family HMM PF01432; match to protein family HMM PF08439; match to protein family HMM TIGR00181; oligoendopeptidase F 855443 pepF_1 8810085 pepF_1 Clostridiales genomosp. BVAB3 str. UPII9-5 oligoendopeptidase F YP_003475219.1 853644 D 699246 CDS YP_003475218.1 289449494 8811346 855531..855974 1 NC_013895.2 identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 855974 rplI 8811346 rplI Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L9 YP_003475218.1 855531 D 699246 CDS YP_003475217.1 289450722 8810638 855976..857418 1 NC_013895.2 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 857418 dnaB 8810638 dnaB Clostridiales genomosp. BVAB3 str. UPII9-5 replicative DNA helicase YP_003475217.1 855976 D 699246 CDS YP_003475216.1 289450034 8811355 857411..858862 1 NC_013895.2 identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 858862 tilS 8811355 tilS Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA(Ile)-lysidine synthetase YP_003475216.1 857411 D 699246 CDS YP_003475215.1 289450731 8810395 858819..859355 1 NC_013895.2 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 859355 hpt 8810395 hpt Clostridiales genomosp. BVAB3 str. UPII9-5 hypoxanthine phosphoribosyltransferase YP_003475215.1 858819 D 699246 CDS YP_003475214.1 289449797 8811256 859359..861380 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; ATP-dependent metallopeptidase HflB 861380 hflB 8811256 hflB Clostridiales genomosp. BVAB3 str. UPII9-5 ATP-dependent metallopeptidase HflB YP_003475214.1 859359 D 699246 CDS YP_003475213.1 289450637 8810416 complement(861531..863027) 1 NC_013895.2 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 863027 murC 8810416 murC Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-N-acetylmuramate--L-alanine ligase YP_003475213.1 861531 R 699246 CDS YP_003475212.1 289449817 8810250 complement(863011..864267) 1 NC_013895.2 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase 864267 prs2_1 8810250 prs2_1 Clostridiales genomosp. BVAB3 str. UPII9-5 ribose-phosphate diphosphokinase YP_003475212.1 863011 R 699246 CDS YP_003475211.1 289449654 8810932 complement(864298..865518) 1 NC_013895.2 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase 865518 prs2_2 8810932 prs2_2 Clostridiales genomosp. BVAB3 str. UPII9-5 ribose-phosphate diphosphokinase YP_003475211.1 864298 R 699246 CDS YP_003475210.1 289450320 8810621 865713..866366 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03598; ribosome biogenesis GTP-binding protein YsxC 866366 ysxC 8810621 ysxC Clostridiales genomosp. BVAB3 str. UPII9-5 ribosome biogenesis GTP-binding protein YsxC YP_003475210.1 865713 D 699246 CDS YP_003475209.1 289450017 8810288 866446..869244 1 NC_013895.2 identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization competence protein ComEC/Rec2-like protein 869244 8810288 HMPREF0868_0896 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA internalization competence protein ComEC/Rec2-like protein YP_003475209.1 866446 D 699246 CDS YP_003475208.1 289449692 8810726 869391..870431 1 NC_013895.2 identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 870431 holA 8810726 holA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA polymerase III subunit delta YP_003475208.1 869391 D 699246 CDS YP_003475207.1 289450121 8811379 870559..872811 1 NC_013895.2 identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate C-acetyltransferase 872811 pflB 8811379 pflB Clostridiales genomosp. BVAB3 str. UPII9-5 formate C-acetyltransferase YP_003475207.1 870559 D 699246 CDS YP_003475206.1 289450755 8810722 872928..874439 1 NC_013895.2 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase 1-activating enzyme 874439 pflA 8810722 pflA Clostridiales genomosp. BVAB3 str. UPII9-5 pyruvate formate-lyase 1-activating enzyme YP_003475206.1 872928 D 699246 CDS YP_003475205.1 289450117 8811344 874509..875051 1 NC_013895.2 identified by match to protein family HMM PF02810; hypothetical protein 875051 8811344 HMPREF0868_0892 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475205.1 874509 D 699246 CDS YP_003475204.1 289450720 8810900 875190..876584 1 NC_013895.2 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457; asparagine--tRNA ligase 876584 asnS 8810900 asnS Clostridiales genomosp. BVAB3 str. UPII9-5 asparagine--tRNA ligase YP_003475204.1 875190 D 699246 CDS YP_003475203.1 289450289 8810029 876622..876744 1 NC_013895.2 hypothetical protein 876744 8810029 HMPREF0868_0890 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475203.1 876622 D 699246 CDS YP_003475202.1 289449440 8810272 876789..877508 1 NC_013895.2 identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; DNA repair protein RadC 877508 radC 8810272 radC Clostridiales genomosp. BVAB3 str. UPII9-5 DNA repair protein RadC YP_003475202.1 876789 D 699246 CDS YP_003475201.1 289449676 8810910 complement(877640..878725) 1 NC_013895.2 identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; aspartate-semialdehyde dehydrogenase 878725 asd 8810910 asd Clostridiales genomosp. BVAB3 str. UPII9-5 aspartate-semialdehyde dehydrogenase YP_003475201.1 877640 R 699246 CDS YP_003475200.1 289450299 8810455 878827..879927 1 NC_013895.2 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific tyrosine recombinase XerC 879927 xerC 8810455 xerC Clostridiales genomosp. BVAB3 str. UPII9-5 site-specific tyrosine recombinase XerC YP_003475200.1 878827 D 699246 CDS YP_003475199.1 289449854 8809956 complement(880307..880603) 1 NC_013895.2 hypothetical protein 880603 8809956 HMPREF0868_0886 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475199.1 880307 R 699246 CDS YP_003475198.1 289449372 8811110 complement(880671..881642) 1 NC_013895.2 identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA dimethylallyltransferase 881642 miaA 8811110 miaA Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA dimethylallyltransferase YP_003475198.1 880671 R 699246 CDS YP_003475197.1 289450496 8810858 complement(881646..883679) 1 NC_013895.2 identified by match to protein family HMM PF01119; match to protein family HMM PF08676; match to protein family HMM TIGR00585; DNA mismatch repair protein 883679 mutL 8810858 mutL Clostridiales genomosp. BVAB3 str. UPII9-5 DNA mismatch repair protein YP_003475197.1 881646 R 699246 CDS YP_003475196.1 289450250 8809982 complement(883694..886324) 1 NC_013895.2 identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070; DNA mismatch repair protein MutS 886324 mutS 8809982 mutS Clostridiales genomosp. BVAB3 str. UPII9-5 DNA mismatch repair protein MutS YP_003475196.1 883694 R 699246 CDS YP_003475195.1 289449396 8810641 complement(886324..887781) 1 NC_013895.2 identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-I(6)A37 thiotransferase enzyme MiaB 887781 miaB 8810641 miaB Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA-I(6)A37 thiotransferase enzyme MiaB YP_003475195.1 886324 R 699246 CDS YP_003475194.1 289450037 8811342 complement(887753..888895) 1 NC_013895.2 identified by match to protein family HMM PF01171; match to protein family HMM PF03054; match to protein family HMM TIGR00420; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 888895 trmU 8811342 trmU Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_003475194.1 887753 R 699246 CDS YP_003475193.1 289450718 8811316 complement(888896..889717) 1 NC_013895.2 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 889717 8811316 HMPREF0868_0880 Clostridiales genomosp. BVAB3 str. UPII9-5 short chain dehydrogenase/reductase family oxidoreductase YP_003475193.1 888896 R 699246 CDS YP_003475192.1 289450694 8810595 complement(889840..890616) 1 NC_013895.2 identified by match to protein family HMM PF07685; CobB/CobQ-like protein 890616 8810595 HMPREF0868_0879 Clostridiales genomosp. BVAB3 str. UPII9-5 CobB/CobQ-like protein YP_003475192.1 889840 R 699246 CDS YP_003475191.1 289449991 8811122 complement(890613..892154) 1 NC_013895.2 identified by match to protein family HMM PF08245; Mur ligase middle domain-containing protein 892154 8811122 HMPREF0868_0878 Clostridiales genomosp. BVAB3 str. UPII9-5 Mur ligase middle domain-containing protein YP_003475191.1 890613 R 699246 CDS YP_003475190.1 289450507 8811556 complement(892215..893000) 1 NC_013895.2 SrtB family sortase 893000 8811556 HMPREF0868_0877 Clostridiales genomosp. BVAB3 str. UPII9-5 SrtB family sortase YP_003475190.1 892215 R 699246 CDS YP_003475189.1 289449845 8811397 complement(893282..895519) 1 NC_013895.2 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591; polyribonucleotide nucleotidyltransferase 895519 pnp 8811397 pnp Clostridiales genomosp. BVAB3 str. UPII9-5 polyribonucleotide nucleotidyltransferase YP_003475189.1 893282 R 699246 CDS YP_003475188.1 289450772 8810519 complement(895699..895962) 1 NC_013895.2 identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 895962 rpsO 8810519 rpsO Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S15 YP_003475188.1 895699 R 699246 CDS YP_003475187.1 289449916 8810020 complement(896044..896655) 1 NC_013895.2 identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 896655 rpsD 8810020 rpsD Clostridiales genomosp. BVAB3 str. UPII9-5 30S ribosomal protein S4 YP_003475187.1 896044 R 699246 CDS YP_003475186.1 289449433 8811558 897078..898469 1 NC_013895.2 identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 898469 8811558 HMPREF0868_0872 Clostridiales genomosp. BVAB3 str. UPII9-5 sodium:neurotransmitter symporter family protein YP_003475186.1 897078 D 699246 CDS YP_003475185.1 289450106 8810180 complement(899031..899900) 1 NC_013895.2 identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; YbgI/SA1388 family dinuclear metal center protein 899900 8810180 HMPREF0868_0870 Clostridiales genomosp. BVAB3 str. UPII9-5 YbgI/SA1388 family dinuclear metal center protein YP_003475185.1 899031 R 699246 CDS YP_003475184.1 289449587 8810867 complement(899953..900672) 1 NC_013895.2 identified by match to protein family HMM PF04816; hypothetical protein 900672 8810867 HMPREF0868_0869 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475184.1 899953 R 699246 CDS YP_003475183.1 289450258 8810454 complement(900672..901733) 1 NC_013895.2 identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD 901733 rpoD 8810454 rpoD Clostridiales genomosp. BVAB3 str. UPII9-5 RNA polymerase sigma factor RpoD YP_003475183.1 900672 R 699246 CDS YP_003475182.1 289449853 8811197 complement(901744..903609) 1 NC_013895.2 identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase 903609 dnaG 8811197 dnaG Clostridiales genomosp. BVAB3 str. UPII9-5 DNA primase YP_003475182.1 901744 R 699246 CDS YP_003475181.1 289450580 8810652 complement(903619..905028) 1 NC_013895.2 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974; six-Cys-in-45 modification radical SAM protein 905028 8810652 HMPREF0868_0866 Clostridiales genomosp. BVAB3 str. UPII9-5 six-Cys-in-45 modification radical SAM protein YP_003475181.1 903619 R 699246 CDS YP_003475180.1 289450047 8811325 complement(905214..905546) 1 NC_013895.2 identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 905546 yajC 8811325 yajC Clostridiales genomosp. BVAB3 str. UPII9-5 preprotein translocase subunit YajC YP_003475180.1 905214 R 699246 CDS YP_003475179.1 289450702 8810444 complement(905648..906121) 1 NC_013895.2 hypothetical protein 906121 8810444 HMPREF0868_0864 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475179.1 905648 R 699246 CDS YP_003475178.1 289449843 8811129 complement(906167..907315) 1 NC_013895.2 identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; tRNA-guanine transglycosylase 907315 tgt 8811129 tgt Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA-guanine transglycosylase YP_003475178.1 906167 R 699246 CDS YP_003475177.1 289450513 8810184 complement(907332..908381) 1 NC_013895.2 identified by match to protein family HMM PF02547; match to protein family HMM TIGR00113; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 908381 queA 8810184 queA Clostridiales genomosp. BVAB3 str. UPII9-5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003475177.1 907332 R 699246 CDS YP_003475176.1 289449591 8810783 complement(908368..909750) 1 NC_013895.2 identified by match to protein family HMM PF01134; match to protein family HMM TIGR00137; tRNA:M(5)U-54 methyltransferase 909750 trmFO 8810783 trmFO Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA:M(5)U-54 methyltransferase YP_003475176.1 908368 R 699246 CDS YP_003475175.1 289450176 8810732 complement(909743..911959) 1 NC_013895.2 identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase I 911959 topA 8810732 topA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA topoisomerase I YP_003475175.1 909743 R 699246 CDS YP_003475174.1 289450127 8811420 complement(911986..913236) 1 NC_013895.2 identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA 913236 dprA 8811420 dprA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA protecting protein DprA YP_003475174.1 911986 R 699246 CDS YP_003475173.1 289450792 8811377 complement(913199..914830) 1 NC_013895.2 identified by match to protein family HMM PF01078; magnesium chelatase subunit ChlI 914830 chlI 8811377 chlI Clostridiales genomosp. BVAB3 str. UPII9-5 magnesium chelatase subunit ChlI YP_003475173.1 913199 R 699246 CDS YP_003475172.1 289450753 8810486 914897..915028 1 NC_013895.2 hypothetical protein 915028 8810486 HMPREF0868_0857 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475172.1 914897 D 699246 CDS YP_003475171.1 289449885 8810267 915078..916172 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein YchF 916172 ychF 8810267 ychF Clostridiales genomosp. BVAB3 str. UPII9-5 GTP-binding protein YchF YP_003475171.1 915078 D 699246 CDS YP_003475170.1 289449671 8810952 complement(916308..916904) 1 NC_013895.2 putative lipoprotein 916904 8810952 HMPREF0868_0855 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003475170.1 916308 R 699246 CDS YP_003475169.1 289450340 8810874 complement(917014..917640) 1 NC_013895.2 identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 917640 coaE 8810874 coaE Clostridiales genomosp. BVAB3 str. UPII9-5 dephospho-CoA kinase YP_003475169.1 917014 R 699246 CDS YP_003475168.1 289450265 8810206 complement(917640..920408) 1 NC_013895.2 identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA-directed DNA polymerase 920408 polA 8810206 polA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-directed DNA polymerase YP_003475168.1 917640 R 699246 CDS YP_003475167.1 289449613 8811471 complement(920428..921129) 1 NC_013895.2 identified by match to protein family HMM PF00849; RNA pseudouridine synthase 921129 8811471 HMPREF0868_0852 Clostridiales genomosp. BVAB3 str. UPII9-5 RNA pseudouridine synthase YP_003475167.1 920428 R 699246 CDS YP_003475166.1 289450840 8810560 complement(921120..921995) 1 NC_013895.2 hypothetical protein 921995 8810560 HMPREF0868_0851 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475166.1 921120 R 699246 CDS YP_003475165.1 289449957 8810090 complement(921995..922720) 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 922720 8810090 HMPREF0868_0850 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003475165.1 921995 R 699246 CDS YP_003475164.1 289449499 8811557 923014..923646 1 NC_013895.2 hypothetical protein 923646 8811557 HMPREF0868_0849 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475164.1 923014 D 699246 CDS YP_003475163.1 289450172 8810501 complement(924270..925514) 1 NC_013895.2 identified by match to protein family HMM PF00365; phosphofructokinase 925514 8810501 HMPREF0868_0847 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphofructokinase YP_003475163.1 924270 R 699246 CDS YP_003475161.1 289450569 8810310 925822..926520 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 926520 8810310 HMPREF0868_0845 Clostridiales genomosp. BVAB3 str. UPII9-5 response regulator receiver domain-containing protein YP_003475161.1 925822 D 699246 CDS YP_003475160.1 289449713 8810999 926576..928453 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 928453 8810999 HMPREF0868_0844 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003475160.1 926576 D 699246 CDS YP_003475159.1 289450385 8811431 928443..929396 1 NC_013895.2 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; pseudouridylate synthase 929396 8811431 HMPREF0868_0843 Clostridiales genomosp. BVAB3 str. UPII9-5 pseudouridylate synthase YP_003475159.1 928443 D 699246 CDS YP_003475158.1 289450803 8810707 929502..930461 1 NC_013895.2 identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147; lipid kinase YegS/Rv2252/BmrU family protein 930461 8810707 HMPREF0868_0842 Clostridiales genomosp. BVAB3 str. UPII9-5 lipid kinase YegS/Rv2252/BmrU family protein YP_003475158.1 929502 D 699246 CDS YP_003475157.1 289450102 8810527 complement(930468..932357) 1 NC_013895.2 hypothetical protein 932357 8810527 HMPREF0868_0841 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475157.1 930468 R 699246 CDS YP_003475156.1 289449924 8811385 complement(932418..934439) 1 NC_013895.2 hypothetical protein 934439 8811385 HMPREF0868_0840 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475156.1 932418 R 699246 CDS YP_003475155.1 289450760 8810161 complement(934441..936168) 1 NC_013895.2 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 936168 8810161 HMPREF0868_0839 Clostridiales genomosp. BVAB3 str. UPII9-5 FAD dependent oxidoreductase YP_003475155.1 934441 R 699246 CDS YP_003475154.1 289449569 8811206 complement(936238..937968) 1 NC_013895.2 identified by match to protein family HMM PF03486; flavoprotein family protein 937968 8811206 HMPREF0868_0838 Clostridiales genomosp. BVAB3 str. UPII9-5 flavoprotein family protein YP_003475154.1 936238 R 699246 CDS YP_003475153.1 289450589 8809936 complement(937975..939153) 1 NC_013895.2 hypothetical protein 939153 8809936 HMPREF0868_0837 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475153.1 937975 R 699246 CDS YP_003475152.1 289449352 8811026 complement(939205..940575) 1 NC_013895.2 hypothetical protein 940575 8811026 HMPREF0868_0836 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475152.1 939205 R 699246 CDS YP_003475151.1 289450412 8810733 complement(940701..941558) 1 NC_013895.2 identified by match to protein family HMM PF01643; acyl-ACP thioesterase 941558 8810733 HMPREF0868_0835 Clostridiales genomosp. BVAB3 str. UPII9-5 acyl-ACP thioesterase YP_003475151.1 940701 R 699246 CDS YP_003475150.1 289450128 8810845 complement(941799..943430) 1 NC_013895.2 identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroL 943430 groL 8810845 groL Clostridiales genomosp. BVAB3 str. UPII9-5 chaperonin GroL YP_003475150.1 941799 R 699246 CDS YP_003475149.1 289450237 8810520 complement(943442..943726) 1 NC_013895.2 identified by match to protein family HMM PF00166; chaperonin GroS 943726 groS 8810520 groS Clostridiales genomosp. BVAB3 str. UPII9-5 chaperonin GroS YP_003475149.1 943442 R 699246 CDS YP_003475148.1 289449917 8811506 complement(943990..945870) 1 NC_013895.2 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; putative transcriptional regulator 945870 8811506 HMPREF0868_0832 Clostridiales genomosp. BVAB3 str. UPII9-5 putative transcriptional regulator YP_003475148.1 943990 R 699246 CDS YP_003475147.1 289450872 8810106 complement(945995..946627) 1 NC_013895.2 identified by match to protein family HMM PF01865; hypothetical protein 946627 8810106 HMPREF0868_0831 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475147.1 945995 R 699246 CDS YP_003475146.1 289449514 8810771 complement(946660..947670) 1 NC_013895.2 identified by match to protein family HMM PF01384; phosphate transporter family protein 947670 8810771 HMPREF0868_0830 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphate transporter family protein YP_003475146.1 946660 R 699246 CDS YP_003475145.1 289450164 8810271 complement(947683..948585) 1 NC_013895.2 identified by match to protein family HMM PF00398; putative dimethyladenosine transferase 948585 8810271 HMPREF0868_0829 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dimethyladenosine transferase YP_003475145.1 947683 R 699246 CDS YP_003475144.1 289449675 8810965 complement(948621..950783) 1 NC_013895.2 hypothetical protein 950783 8810965 HMPREF0868_0828 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475144.1 948621 R 699246 CDS YP_003475143.1 289450351 8810873 complement(950773..952116) 1 NC_013895.2 identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 952116 pgi 8810873 pgi Clostridiales genomosp. BVAB3 str. UPII9-5 glucose-6-phosphate isomerase YP_003475143.1 950773 R 699246 CDS YP_003475142.1 289450264 8810626 complement(952192..953313) 1 NC_013895.2 identified by match to protein family HMM PF00180; match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase 953313 leuB 8810626 leuB Clostridiales genomosp. BVAB3 str. UPII9-5 3-isopropylmalate dehydrogenase YP_003475142.1 952192 R 699246 CDS YP_003475141.1 289450022 8811131 953518..955518 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 955518 8811131 HMPREF0868_0825 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475141.1 953518 D 699246 CDS YP_003475140.1 289450515 8810686 complement(955659..956495) 1 NC_013895.2 identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase, cyclophilin-type 956495 8810686 HMPREF0868_0824 Clostridiales genomosp. BVAB3 str. UPII9-5 peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_003475140.1 955659 R 699246 CDS YP_003475139.1 289450081 8810006 956657..957982 1 NC_013895.2 identified by match to protein family HMM PF03051; putative aminopeptidase C 957982 8810006 HMPREF0868_0823 Clostridiales genomosp. BVAB3 str. UPII9-5 putative aminopeptidase C YP_003475139.1 956657 D 699246 CDS YP_003475138.1 289449419 8810947 complement(958184..959092) 1 NC_013895.2 hypothetical protein 959092 8810947 HMPREF0868_0822 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475138.1 958184 R 699246 CDS YP_003475137.1 289450335 8810227 complement(959089..960057) 1 NC_013895.2 identified by match to protein family HMM PF07170; match to protein family HMM TIGR03064; SrtB family sortase 960057 srtB 8810227 srtB Clostridiales genomosp. BVAB3 str. UPII9-5 SrtB family sortase YP_003475137.1 959089 R 699246 CDS YP_003475136.1 289449632 8811088 complement(960123..961346) 1 NC_013895.2 hypothetical protein 961346 8811088 HMPREF0868_0820 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475136.1 960123 R 699246 CDS YP_003475135.1 289450474 8810511 complement(961428..962318) 1 NC_013895.2 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 962318 lepB_1 8810511 lepB_1 Clostridiales genomosp. BVAB3 str. UPII9-5 signal peptidase I YP_003475135.1 961428 R 699246 CDS YP_003475134.1 289449909 8811236 complement(962352..964805) 1 NC_013895.2 hypothetical protein 964805 8811236 HMPREF0868_0818 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475134.1 962352 R 699246 CDS YP_003475133.1 289450619 8810543 complement(965146..966633) 1 NC_013895.2 identified by match to protein family HMM PF08903; hypothetical protein 966633 8810543 HMPREF0868_0817 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475133.1 965146 R 699246 CDS YP_003475132.1 289449939 8810004 complement(966705..967826) 1 NC_013895.2 identified by match to protein family HMM PF01522; polysaccharide deacetylase 967826 8810004 HMPREF0868_0816 Clostridiales genomosp. BVAB3 str. UPII9-5 polysaccharide deacetylase YP_003475132.1 966705 R 699246 CDS YP_003475131.1 289449417 8811133 complement(968031..968516) 1 NC_013895.2 hypothetical protein 968516 8811133 HMPREF0868_0815 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475131.1 968031 R 699246 CDS YP_003475130.1 289450517 8810277 complement(968899..969867) 1 NC_013895.2 identified by match to protein family HMM PF00294; putative fructokinase 969867 8810277 HMPREF0868_0814 Clostridiales genomosp. BVAB3 str. UPII9-5 putative fructokinase YP_003475130.1 968899 R 699246 CDS YP_003475129.1 289449681 8810404 complement(970148..970783) 1 NC_013895.2 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01990; match to protein family HMM TIGR02009; beta-phosphoglucomutase 970783 pgmB 8810404 pgmB Clostridiales genomosp. BVAB3 str. UPII9-5 beta-phosphoglucomutase YP_003475129.1 970148 R 699246 CDS YP_003475128.1 289449806 8811302 complement(970822..972801) 1 NC_013895.2 identified by match to protein family HMM PF01055; glycosyl hydrolase family 31 protein 972801 8811302 HMPREF0868_0812 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyl hydrolase family 31 protein YP_003475128.1 970822 R 699246 CDS YP_003475127.1 289450680 8810043 complement(972808..973668) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 973668 8810043 HMPREF0868_0811 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475127.1 972808 R 699246 CDS YP_003475126.1 289449453 8810855 complement(973661..974581) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 974581 8810855 HMPREF0868_0810 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003475126.1 973661 R 699246 CDS YP_003475125.1 289450247 8809990 complement(974645..975973) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 975973 8809990 HMPREF0868_0809 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003475125.1 974645 R 699246 CDS YP_003475124.1 289449404 8810700 complement(976109..977140) 1 NC_013895.2 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 977140 8810700 HMPREF0868_0808 Clostridiales genomosp. BVAB3 str. UPII9-5 LacI family transcriptional regulator YP_003475124.1 976109 R 699246 CDS YP_003475123.1 289450095 8810293 977368..979155 1 NC_013895.2 identified by match to protein family HMM PF06824; hypothetical protein 979155 8810293 HMPREF0868_0807 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475123.1 977368 D 699246 CDS YP_003475122.1 289449697 8810566 979175..981313 1 NC_013895.2 identified by match to protein family HMM PF03632; match to protein family HMM PF03636; glycosyl hydrolase family 65 central catalytic domain-containing protein 981313 8810566 HMPREF0868_0806 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyl hydrolase family 65 central catalytic domain-containing protein YP_003475122.1 979175 D 699246 CDS YP_003475121.1 289449962 8811531 982005..982145 1 NC_013895.2 hypothetical protein 982145 8811531 HMPREF0868_0805 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475121.1 982005 D 699246 CDS YP_003475120.1 289450842 8810781 complement(982320..982850) 1 NC_013895.2 identified by match to protein family HMM PF00186; dihydrofolate reductase 982850 folA 8810781 folA Clostridiales genomosp. BVAB3 str. UPII9-5 dihydrofolate reductase YP_003475120.1 982320 R 699246 CDS YP_003475119.1 289450174 8810093 complement(982910..983740) 1 NC_013895.2 identified by match to protein family HMM PF00303; match to protein family HMM TIGR03284; thymidylate synthase 983740 thyA 8810093 thyA Clostridiales genomosp. BVAB3 str. UPII9-5 thymidylate synthase YP_003475119.1 982910 R 699246 CDS YP_003475118.1 289449502 8811181 complement(983854..984759) 1 NC_013895.2 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comEA protein 984759 8811181 HMPREF0868_0801 Clostridiales genomosp. BVAB3 str. UPII9-5 comEA protein YP_003475118.1 983854 R 699246 CDS YP_003475117.1 289450564 8811119 complement(984894..985235) 1 NC_013895.2 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap-like protein 985235 8811119 HMPREF0868_0800 Clostridiales genomosp. BVAB3 str. UPII9-5 iojap-like protein YP_003475117.1 984894 R 699246 CDS YP_003475116.1 289450504 8811470 complement(985423..986706) 1 NC_013895.2 identified by match to protein family HMM PF01467; match to protein family HMM PF01966; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; match to protein family HMM TIGR00488; nicotinate-nucleotide adenylyltransferase 986706 nadD 8811470 nadD Clostridiales genomosp. BVAB3 str. UPII9-5 nicotinate-nucleotide adenylyltransferase YP_003475116.1 985423 R 699246 CDS YP_003475115.1 289450839 8810567 complement(986699..988102) 1 NC_013895.2 identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; hypothetical protein 988102 8810567 HMPREF0868_0798 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475115.1 986699 R 699246 CDS YP_003475114.1 289449963 8810809 complement(988104..988943) 1 NC_013895.2 AIR carboxylase family protein 988943 8810809 HMPREF0868_0797 Clostridiales genomosp. BVAB3 str. UPII9-5 AIR carboxylase family protein YP_003475114.1 988104 R 699246 CDS YP_003475113.1 289450201 8810235 complement(989072..990181) 1 NC_013895.2 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 990181 prfB 8810235 prfB Clostridiales genomosp. BVAB3 str. UPII9-5 peptide chain release factor 2 YP_003475113.1 989072 R 699246 CDS YP_003475112.1 289449639 8810588 complement(990187..991365) 1 NC_013895.2 identified by match to protein family HMM PF00155; putative aspartate transaminase 991365 8810588 HMPREF0868_0795 Clostridiales genomosp. BVAB3 str. UPII9-5 putative aspartate transaminase YP_003475112.1 990187 R 699246 CDS YP_003475111.1 289449984 8810109 complement(991362..991844) 1 NC_013895.2 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 991844 8810109 HMPREF0868_0794 Clostridiales genomosp. BVAB3 str. UPII9-5 AsnC family transcriptional regulator YP_003475111.1 991362 R 699246 CDS YP_003475110.1 289449517 8811217 complement(991886..992950) 1 NC_013895.2 hypothetical protein 992950 8811217 HMPREF0868_0793 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475110.1 991886 R 699246 CDS YP_003475109.1 289450600 8810503 complement(993121..993720) 1 NC_013895.2 identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 993720 rdgB 8810503 rdgB Clostridiales genomosp. BVAB3 str. UPII9-5 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_003475109.1 993121 R 699246 CDS YP_003475108.1 289449902 8811196 complement(993671..995392) 1 NC_013895.2 identified by match to protein family HMM PF01189; putative ribosomal RNA small subunit methyltransferase F 995392 8811196 HMPREF0868_0791 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribosomal RNA small subunit methyltransferase F YP_003475108.1 993671 R 699246 CDS YP_003475107.1 289450579 8810524 complement(995392..996963) 1 NC_013895.2 hypothetical protein 996963 8810524 HMPREF0868_0790 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475107.1 995392 R 699246 CDS YP_003475106.1 289449921 8810974 complement(996963..998699) 1 NC_013895.2 identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginine--tRNA ligase 998699 argS 8810974 argS Clostridiales genomosp. BVAB3 str. UPII9-5 arginine--tRNA ligase YP_003475106.1 996963 R 699246 CDS YP_003475105.1 289450360 8810225 complement(998833..1000284) 1 NC_013895.2 identified by match to protein family HMM PF00534; match to protein family HMM PF08323; match to protein family HMM TIGR02095; glycogen/starch synthase, ADP-glucose type 1000284 glgA 8810225 glgA Clostridiales genomosp. BVAB3 str. UPII9-5 glycogen/starch synthase, ADP-glucose type YP_003475105.1 998833 R 699246 CDS YP_003475104.1 289449630 8810584 complement(1000299..1001405) 1 NC_013895.2 identified by match to protein family HMM TIGR02092; glucose-1-phosphate adenylyltransferase subunit GlgD 1001405 glgD 8810584 glgD Clostridiales genomosp. BVAB3 str. UPII9-5 glucose-1-phosphate adenylyltransferase subunit GlgD YP_003475104.1 1000299 R 699246 CDS YP_003475103.1 289449980 8809964 complement(1001421..1002677) 1 NC_013895.2 identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; glucose-1-phosphate adenylyltransferase 1002677 glgC 8809964 glgC Clostridiales genomosp. BVAB3 str. UPII9-5 glucose-1-phosphate adenylyltransferase YP_003475103.1 1001421 R 699246 CDS YP_003475102.1 289449380 8810405 complement(1002725..1004716) 1 NC_013895.2 identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM TIGR01515; 1,4-alpha-glucan branching enzyme 1004716 glgB 8810405 glgB Clostridiales genomosp. BVAB3 str. UPII9-5 1,4-alpha-glucan branching enzyme YP_003475102.1 1002725 R 699246 CDS YP_003475101.1 289449807 8811378 complement(1004835..1005728) 1 NC_013895.2 identified by match to protein family HMM PF02588; hypothetical protein 1005728 8811378 HMPREF0868_0784 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475101.1 1004835 R 699246 CDS YP_003475100.1 289450754 8810699 complement(1005959..1006390) 1 NC_013895.2 identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin 1006390 8810699 HMPREF0868_0783 Clostridiales genomosp. BVAB3 str. UPII9-5 flavodoxin YP_003475100.1 1005959 R 699246 CDS YP_003475099.1 289450094 8811350 complement(1006430..1006981) 1 NC_013895.2 hypothetical protein 1006981 8811350 HMPREF0868_0782 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475099.1 1006430 R 699246 CDS YP_003475098.1 289450726 8810137 complement(1007195..1008238) 1 NC_013895.2 identified by match to protein family HMM PF01170; match to protein family HMM PF02475; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00406; 50S ribosomal protein L11 methyltransferase 1008238 prmA 8810137 prmA Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L11 methyltransferase YP_003475098.1 1007195 R 699246 CDS YP_003475097.1 289449545 8811043 complement(1008274..1009419) 1 NC_013895.2 identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ 1009419 dnaJ 8811043 dnaJ Clostridiales genomosp. BVAB3 str. UPII9-5 chaperone protein DnaJ YP_003475097.1 1008274 R 699246 CDS YP_003475096.1 289450429 8810014 complement(1009439..1011280) 1 NC_013895.2 identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK 1011280 dnaK 8810014 dnaK Clostridiales genomosp. BVAB3 str. UPII9-5 chaperone protein DnaK YP_003475096.1 1009439 R 699246 CDS YP_003475095.1 289449427 8810917 complement(1011387..1012067) 1 NC_013895.2 identified by match to protein family HMM PF01025; co-chaperone GrpE 1012067 grpE 8810917 grpE Clostridiales genomosp. BVAB3 str. UPII9-5 co-chaperone GrpE YP_003475095.1 1011387 R 699246 CDS YP_003475094.1 289450306 8811341 complement(1012057..1013139) 1 NC_013895.2 identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA 1013139 hrcA 8811341 hrcA Clostridiales genomosp. BVAB3 str. UPII9-5 heat-inducible transcription repressor HrcA YP_003475094.1 1012057 R 699246 CDS YP_003475093.1 289450717 8810681 complement(1013254..1014519) 1 NC_013895.2 identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; putative oxygen-independent coproporphyrinogen III oxidase 1014519 8810681 HMPREF0868_0776 Clostridiales genomosp. BVAB3 str. UPII9-5 putative oxygen-independent coproporphyrinogen III oxidase YP_003475093.1 1013254 R 699246 CDS YP_003475092.1 289450076 8811220 complement(1014512..1015228) 1 NC_013895.2 hypothetical protein 1015228 8811220 HMPREF0868_0775 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475092.1 1014512 R 699246 CDS YP_003475091.1 289450603 8810145 complement(1015239..1016543) 1 NC_013895.2 hypothetical protein 1016543 8810145 HMPREF0868_0774 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475091.1 1015239 R 699246 CDS YP_003475090.1 289449553 8810606 complement(1016611..1017582) 1 NC_013895.2 identified by match to protein family HMM PF01145; SPFH/Band 7/PHB domain-containing protein 1017582 8810606 HMPREF0868_0773 Clostridiales genomosp. BVAB3 str. UPII9-5 SPFH/Band 7/PHB domain-containing protein YP_003475090.1 1016611 R 699246 CDS YP_003475089.1 289450002 8810915 complement(1017658..1018149) 1 NC_013895.2 identified by match to protein family HMM PF01957; nodulation efficiency protein D 1018149 nfeD 8810915 nfeD Clostridiales genomosp. BVAB3 str. UPII9-5 nodulation efficiency protein D YP_003475089.1 1017658 R 699246 CDS YP_003475088.1 289450304 8810231 complement(1018164..1019354) 1 NC_013895.2 identified by match to protein family HMM PF04389; M28 family peptidase 1019354 8810231 HMPREF0868_0771 Clostridiales genomosp. BVAB3 str. UPII9-5 M28 family peptidase YP_003475088.1 1018164 R 699246 CDS YP_003475087.1 289449635 8811058 complement(1019525..1020040) 1 NC_013895.2 hypothetical protein 1020040 8811058 HMPREF0868_0770 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475087.1 1019525 R 699246 CDS YP_003475086.1 289450444 8811290 complement(1020034..1020483) 1 NC_013895.2 identified by match to protein family HMM PF00226; DnaJ domain-containing protein 1020483 8811290 HMPREF0868_0769 Clostridiales genomosp. BVAB3 str. UPII9-5 DnaJ domain-containing protein YP_003475086.1 1020034 R 699246 CDS YP_003475085.1 289450668 8810592 1020794..1022467 1 NC_013895.2 identified by match to protein family HMM PF01268; formate--tetrahydrofolate ligase 1022467 fhs 8810592 fhs Clostridiales genomosp. BVAB3 str. UPII9-5 formate--tetrahydrofolate ligase YP_003475085.1 1020794 D 699246 CDS YP_003475084.1 289449988 8811501 complement(1022499..1023401) 1 NC_013895.2 hypothetical protein 1023401 8811501 HMPREF0868_0767 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475084.1 1022499 R 699246 CDS YP_003475083.1 289450868 8809991 1023585..1025045 1 NC_013895.2 identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamate--tRNA ligase 1025045 gltX 8809991 gltX Clostridiales genomosp. BVAB3 str. UPII9-5 glutamate--tRNA ligase YP_003475083.1 1023585 D 699246 CDS YP_003475082.1 289449405 8810876 1025047..1026768 1 NC_013895.2 identified by match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440; glutamine--tRNA ligase 1026768 glnS 8810876 glnS Clostridiales genomosp. BVAB3 str. UPII9-5 glutamine--tRNA ligase YP_003475082.1 1025047 D 699246 CDS YP_003475081.1 289450267 8810202 complement(1027005..1028774) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1028774 8810202 HMPREF0868_0764 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475081.1 1027005 R 699246 CDS YP_003475080.1 289449609 8810981 complement(1028771..1030504) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1030504 8810981 HMPREF0868_0763 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003475080.1 1028771 R 699246 CDS YP_003475079.1 289450367 8810287 complement(1030553..1030807) 1 NC_013895.2 hypothetical protein 1030807 8810287 HMPREF0868_0762 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475079.1 1030553 R 699246 CDS YP_003475078.1 289449691 8810802 complement(1030981..1032348) 1 NC_013895.2 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin 1032348 8810802 HMPREF0868_0761 Clostridiales genomosp. BVAB3 str. UPII9-5 trypsin YP_003475078.1 1030981 R 699246 CDS YP_003475077.1 289450194 8810113 complement(1032475..1032885) 1 NC_013895.2 hypothetical protein 1032885 8810113 HMPREF0868_0760 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475077.1 1032475 R 699246 CDS YP_003475076.1 289449521 8810754 1033065..1033700 1 NC_013895.2 identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164; phosphatidylserine decarboxylase 1033700 psd 8810754 psd Clostridiales genomosp. BVAB3 str. UPII9-5 phosphatidylserine decarboxylase YP_003475076.1 1033065 D 699246 CDS YP_003475075.1 289450148 8810060 1033704..1034276 1 NC_013895.2 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol-serine O-phosphatidyltransferase 1034276 pssA 8810060 pssA Clostridiales genomosp. BVAB3 str. UPII9-5 CDP-diacylglycerol-serine O-phosphatidyltransferase YP_003475075.1 1033704 D 699246 CDS YP_003475074.1 289449469 8811408 complement(1034455..1036194) 1 NC_013895.2 identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 1036194 pyk 8811408 pyk Clostridiales genomosp. BVAB3 str. UPII9-5 pyruvate kinase YP_003475074.1 1034455 R 699246 CDS YP_003475073.1 289450783 8810717 complement(1036300..1036893) 1 NC_013895.2 hypothetical protein 1036893 8810717 HMPREF0868_0756 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475073.1 1036300 R 699246 CDS YP_003475072.1 289450112 8810265 complement(1036926..1037519) 1 NC_013895.2 identified by match to protein family HMM PF02417; overlaps another CDS with the same product name; chromate transport protein 1037519 8810265 HMPREF0868_0755 Clostridiales genomosp. BVAB3 str. UPII9-5 chromate transport protein YP_003475072.1 1036926 R 699246 CDS YP_003475071.1 289449669 8810507 complement(1037516..1038100) 1 NC_013895.2 identified by match to protein family HMM PF02417; overlaps another CDS with the same product name; chromate transport protein 1038100 8810507 HMPREF0868_0754 Clostridiales genomosp. BVAB3 str. UPII9-5 chromate transport protein YP_003475071.1 1037516 R 699246 CDS YP_003475070.1 289449905 8810198 complement(1038104..1038583) 1 NC_013895.2 identified by match to protein family HMM PF00293; putative mutator MutT protein 1038583 8810198 HMPREF0868_0753 Clostridiales genomosp. BVAB3 str. UPII9-5 putative mutator MutT protein YP_003475070.1 1038104 R 699246 CDS YP_003475069.1 289449605 8810741 complement(1038705..1039889) 1 NC_013895.2 identified by match to protein family HMM PF00390; match to protein family HMM PF03949; malic enzyme, NAD binding domain-containing protein 1039889 8810741 HMPREF0868_0752 Clostridiales genomosp. BVAB3 str. UPII9-5 malic enzyme, NAD binding domain-containing protein YP_003475069.1 1038705 R 699246 CDS YP_003475068.1 289450136 8810946 complement(1040077..1041408) 1 NC_013895.2 identified by match to protein family HMM PF03390; putative citrate-sodium symporter 1041408 8810946 HMPREF0868_0751 Clostridiales genomosp. BVAB3 str. UPII9-5 putative citrate-sodium symporter YP_003475068.1 1040077 R 699246 CDS YP_003475067.1 289450334 8810201 complement(1041779..1043182) 1 NC_013895.2 identified by match to protein family HMM PF01594; hypothetical protein 1043182 8810201 HMPREF0868_0750 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475067.1 1041779 R 699246 CDS YP_003475066.1 289449608 8811551 1043344..1044672 1 NC_013895.2 hypothetical protein 1044672 8811551 HMPREF0868_0749 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475066.1 1043344 D 699246 CDS YP_003475065.1 289449757 8810841 complement(1045028..1047757) 1 NC_013895.2 hypothetical protein 1047757 8810841 HMPREF0868_0746 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475065.1 1045028 R 699246 CDS YP_003475064.1 289450233 8809939 complement(1047918..1048841) 1 NC_013895.2 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; TrmH family RNA methyltransferase 1048841 8809939 HMPREF0868_0745 Clostridiales genomosp. BVAB3 str. UPII9-5 TrmH family RNA methyltransferase YP_003475064.1 1047918 R 699246 CDS YP_003475063.1 289449355 8811054 complement(1048903..1049406) 1 NC_013895.2 identified by match to protein family HMM PF00636; RNase3 domain-containing protein 1049406 8811054 HMPREF0868_0744 Clostridiales genomosp. BVAB3 str. UPII9-5 RNase3 domain-containing protein YP_003475063.1 1048903 R 699246 CDS YP_003475062.1 289450440 8810213 complement(1049399..1050820) 1 NC_013895.2 identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteine--tRNA ligase 1050820 cysS 8810213 cysS Clostridiales genomosp. BVAB3 str. UPII9-5 cysteine--tRNA ligase YP_003475062.1 1049399 R 699246 CDS YP_003475061.2 308513246 8810388 1051417..1052829 1 NC_013895.2 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1052829 8810388 HMPREF0868_0742 Clostridiales genomosp. BVAB3 str. UPII9-5 GntR family transcriptional regulator YP_003475061.2 1051417 D 699246 CDS YP_003475060.1 289449790 8811289 complement(1052878..1053738) 1 NC_013895.2 ComF family protein 1053738 8811289 HMPREF0868_0741 Clostridiales genomosp. BVAB3 str. UPII9-5 ComF family protein YP_003475060.1 1052878 R 699246 CDS YP_003475059.1 289450667 8810598 complement(1053924..1055129) 1 NC_013895.2 identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; methionine adenosyltransferase 1055129 metK 8810598 metK Clostridiales genomosp. BVAB3 str. UPII9-5 methionine adenosyltransferase YP_003475059.1 1053924 R 699246 CDS YP_003475058.1 289449994 8811461 complement(1055428..1056588) 1 NC_013895.2 identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR02351; thiazole biosynthesis protein ThiH 1056588 thiH 8811461 thiH Clostridiales genomosp. BVAB3 str. UPII9-5 thiazole biosynthesis protein ThiH YP_003475058.1 1055428 R 699246 CDS YP_003475057.1 289450831 8810889 complement(1056599..1057360) 1 NC_013895.2 identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG 1057360 thiG 8810889 thiG Clostridiales genomosp. BVAB3 str. UPII9-5 thiazole biosynthesis protein ThiG YP_003475057.1 1056599 R 699246 CDS YP_003475056.1 289450278 8810583 complement(1057382..1057945) 1 NC_013895.2 identified by match to protein family HMM PF00899; putative thiamine biosynthesis protein ThiF 1057945 8810583 HMPREF0868_0736 Clostridiales genomosp. BVAB3 str. UPII9-5 putative thiamine biosynthesis protein ThiF YP_003475056.1 1057382 R 699246 CDS YP_003475055.2 308513247 8810813 complement(1057968..1058252) 1 NC_013895.2 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 1058252 thiS 8810813 thiS Clostridiales genomosp. BVAB3 str. UPII9-5 thiamine biosynthesis protein ThiS YP_003475055.2 1057968 R 699246 CDS YP_003475054.1 289450205 8810320 1058433..1059572 1 NC_013895.2 hypothetical protein 1059572 8810320 HMPREF0868_0734 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475054.1 1058433 D 699246 CDS YP_003475053.1 289449722 8810237 1059596..1060753 1 NC_013895.2 identified by match to protein family HMM PF00437; type II/IV secretion system protein 1060753 8810237 HMPREF0868_0733 Clostridiales genomosp. BVAB3 str. UPII9-5 type II/IV secretion system protein YP_003475053.1 1059596 D 699246 CDS YP_003475052.1 289449641 8811116 1060828..1062465 1 NC_013895.2 hypothetical protein 1062465 8811116 HMPREF0868_0732 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475052.1 1060828 D 699246 CDS YP_003475051.1 289450501 8810189 complement(1062497..1063132) 1 NC_013895.2 putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1063132 8810189 HMPREF0868_0731 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003475051.1 1062497 R 699246 CDS YP_003475050.1 289449596 8811309 complement(1063133..1064020) 1 NC_013895.2 nucleotide-binding family protein 1064020 8811309 HMPREF0868_0730 Clostridiales genomosp. BVAB3 str. UPII9-5 nucleotide-binding family protein YP_003475050.1 1063133 R 699246 CDS YP_003475049.1 289450687 8811493 complement(1064013..1064651) 1 NC_013895.2 identified by match to protein family HMM PF05175; match to protein family HMM PF08241; methyltransferase small domain-containing protein 1064651 8811493 HMPREF0868_0729 Clostridiales genomosp. BVAB3 str. UPII9-5 methyltransferase small domain-containing protein YP_003475049.1 1064013 R 699246 CDS YP_003475048.1 289450861 8810574 complement(1064651..1066462) 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393; GTP-binding protein LepA 1066462 lepA 8810574 lepA Clostridiales genomosp. BVAB3 str. UPII9-5 GTP-binding protein LepA YP_003475048.1 1064651 R 699246 CDS YP_003475047.1 289449970 8810064 complement(1066459..1067103) 1 NC_013895.2 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 1067103 lepB_2 8810064 lepB_2 Clostridiales genomosp. BVAB3 str. UPII9-5 signal peptidase I YP_003475047.1 1066459 R 699246 CDS YP_003475046.1 289449473 8810784 complement(1067269..1068564) 1 NC_013895.2 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 1068564 lepB_3 8810784 lepB_3 Clostridiales genomosp. BVAB3 str. UPII9-5 signal peptidase I YP_003475046.1 1067269 R 699246 CDS YP_003475045.1 289450177 8810786 complement(1068561..1070357) 1 NC_013895.2 identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartate--tRNA ligase 1070357 aspS 8810786 aspS Clostridiales genomosp. BVAB3 str. UPII9-5 aspartate--tRNA ligase YP_003475045.1 1068561 R 699246 CDS YP_003475044.1 289450179 8810864 complement(1070441..1071700) 1 NC_013895.2 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidine--tRNA ligase 1071700 hisS 8810864 hisS Clostridiales genomosp. BVAB3 str. UPII9-5 histidine--tRNA ligase YP_003475044.1 1070441 R 699246 CDS YP_003475043.1 289450255 8811356 complement(1071747..1072487) 1 NC_013895.2 identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; putative 16S rRNA methyltransferase RsmE 1072487 8811356 HMPREF0868_0723 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 16S rRNA methyltransferase RsmE YP_003475043.1 1071747 R 699246 CDS YP_003475042.1 289450732 8810400 1072774..1073529 1 NC_013895.2 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 1073529 xth 8810400 xth Clostridiales genomosp. BVAB3 str. UPII9-5 exodeoxyribonuclease III YP_003475042.1 1072774 D 699246 CDS YP_003475041.1 289449802 8810284 1073568..1075019 1 NC_013895.2 identified by match to protein family HMM TIGR00416; DNA repair protein RadA 1075019 radA 8810284 radA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA repair protein RadA YP_003475041.1 1073568 D 699246 CDS YP_003475040.1 289449688 8810990 1075032..1075769 1 NC_013895.2 identified by match to protein family HMM PF01128; putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1075769 8810990 HMPREF0868_0720 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003475040.1 1075032 D 699246 CDS YP_003475039.1 289450376 8810119 1076049..1077434 1 NC_013895.2 identified by match to protein family HMM PF01554; MATE efflux family protein 1077434 8810119 HMPREF0868_0719 Clostridiales genomosp. BVAB3 str. UPII9-5 MATE efflux family protein YP_003475039.1 1076049 D 699246 CDS YP_003475038.1 289449527 8810750 complement(1077544..1078176) 1 NC_013895.2 identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase 1078176 pyrE 8810750 pyrE Clostridiales genomosp. BVAB3 str. UPII9-5 orotate phosphoribosyltransferase YP_003475038.1 1077544 R 699246 CDS YP_003475037.1 289450145 8811336 complement(1078299..1078988) 1 NC_013895.2 identified by match to protein family HMM PF00215; match to protein family HMM TIGR01740; orotidine 5'-phosphate decarboxylase 1078988 pyrF 8811336 pyrF Clostridiales genomosp. BVAB3 str. UPII9-5 orotidine 5'-phosphate decarboxylase YP_003475037.1 1078299 R 699246 CDS YP_003475036.1 289450712 8810222 complement(1079051..1080001) 1 NC_013895.2 identified by match to protein family HMM PF01180; match to protein family HMM TIGR01037; dihydroorotate oxidase catalytic subunit 1080001 pyrD 8810222 pyrD Clostridiales genomosp. BVAB3 str. UPII9-5 dihydroorotate oxidase catalytic subunit YP_003475036.1 1079051 R 699246 CDS YP_003475035.1 289449628 8810359 complement(1079991..1080821) 1 NC_013895.2 identified by match to protein family HMM PF00175; putative dihydroorotate oxidase, electron transfer subunit 1080821 8810359 HMPREF0868_0715 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dihydroorotate oxidase, electron transfer subunit YP_003475035.1 1079991 R 699246 CDS YP_003475034.1 289449761 8811260 complement(1080864..1082189) 1 NC_013895.2 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00857; putative dihydroorotase 1082189 8811260 HMPREF0868_0714 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dihydroorotase YP_003475034.1 1080864 R 699246 CDS YP_003475033.1 289450640 8810843 complement(1082186..1082377) 1 NC_013895.2 hypothetical protein 1082377 8810843 HMPREF0868_0713 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475033.1 1082186 R 699246 CDS YP_003475032.1 289450235 8810182 complement(1082488..1082667) 1 NC_013895.2 hypothetical protein 1082667 8810182 HMPREF0868_0712 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475032.1 1082488 R 699246 CDS YP_003475031.1 289449589 8811235 1082759..1082932 1 NC_013895.2 hypothetical protein 1082932 8811235 HMPREF0868_0711 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475031.1 1082759 D 699246 CDS YP_003475030.1 289450618 8810630 1082934..1084421 1 NC_013895.2 hypothetical protein 1084421 8810630 HMPREF0868_0710 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475030.1 1082934 D 699246 CDS YP_003475029.1 289450026 8810406 complement(1084574..1085203) 1 NC_013895.2 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 1085203 upp 8810406 upp Clostridiales genomosp. BVAB3 str. UPII9-5 uracil phosphoribosyltransferase YP_003475029.1 1084574 R 699246 CDS YP_003475028.1 289449808 8811291 complement(1085437..1086177) 1 NC_013895.2 identified by match to protein family HMM PF00483; nucleotidyl transferase 1086177 8811291 HMPREF0868_0708 Clostridiales genomosp. BVAB3 str. UPII9-5 nucleotidyl transferase YP_003475028.1 1085437 R 699246 CDS YP_003475027.1 289450669 8811049 complement(1086177..1087469) 1 NC_013895.2 identified by match to protein family HMM PF01170; hypothetical protein 1087469 8811049 HMPREF0868_0707 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475027.1 1086177 R 699246 CDS YP_003475026.1 289450435 8810826 complement(1087921..1088046) 1 NC_013895.2 hypothetical protein 1088046 8810826 HMPREF0868_0706 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475026.1 1087921 R 699246 CDS YP_003475025.1 289450218 8811507 1088266..1088436 1 NC_013895.2 hypothetical protein 1088436 8811507 HMPREF0868_0705 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475025.1 1088266 D 699246 CDS YP_003475024.1 289450873 8811065 1088485..1089327 1 NC_013895.2 identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; match to protein family HMM TIGR00577; DNA-formamidopyrimidine glycosylase 1089327 mutM 8811065 mutM Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-formamidopyrimidine glycosylase YP_003475024.1 1088485 D 699246 CDS YP_003475023.1 289450451 8810061 1089499..1089978 1 NC_013895.2 hypothetical protein 1089978 8810061 HMPREF0868_0703 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475023.1 1089499 D 699246 CDS YP_003475022.1 289449470 8811538 1090108..1091505 1 NC_013895.2 identified by match to protein family HMM PF02127; aminopeptidase I zinc metalloprotease (M18) 1091505 8811538 HMPREF0868_0702 Clostridiales genomosp. BVAB3 str. UPII9-5 aminopeptidase I zinc metalloprotease (M18) YP_003475022.1 1090108 D 699246 CDS YP_003475021.1 289450416 8810439 1091750..1092025 1 NC_013895.2 identified by match to protein family HMM PF00216; DNA-binding protein HU 1092025 hup 8810439 hup Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding protein HU YP_003475021.1 1091750 D 699246 CDS YP_003475020.1 289449838 8811150 1092143..1092586 1 NC_013895.2 hypothetical protein 1092586 8811150 HMPREF0868_0699 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475020.1 1092143 D 699246 CDS YP_003475019.1 289450534 8810628 1092649..1093098 1 NC_013895.2 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding region 1093098 8810628 HMPREF0868_0698 Clostridiales genomosp. BVAB3 str. UPII9-5 cytidine and deoxycytidylate deaminase zinc-binding region YP_003475019.1 1092649 D 699246 CDS YP_003475018.1 289450024 8810129 1093112..1093528 1 NC_013895.2 identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 1093528 mscL 8810129 mscL Clostridiales genomosp. BVAB3 str. UPII9-5 large conductance mechanosensitive channel protein YP_003475018.1 1093112 D 699246 CDS YP_003475017.1 289449537 8810853 1093622..1094185 1 NC_013895.2 hypothetical protein 1094185 8810853 HMPREF0868_0696 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475017.1 1093622 D 699246 CDS YP_003475016.1 289450245 8810329 complement(1094457..1095656) 1 NC_013895.2 identified by match to protein family HMM PF00753; putative type A flavoprotein FprA 1095656 8810329 HMPREF0868_0695 Clostridiales genomosp. BVAB3 str. UPII9-5 putative type A flavoprotein FprA YP_003475016.1 1094457 R 699246 CDS YP_003475015.1 289449731 8811084 complement(1095864..1096019) 1 NC_013895.2 hypothetical protein 1096019 8811084 HMPREF0868_0694 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475015.1 1095864 R 699246 CDS YP_003475014.1 289450470 8810009 complement(1096050..1096211) 1 NC_013895.2 identified by match to protein family HMM PF00301; rubredoxin 1096211 8810009 HMPREF0868_0693 Clostridiales genomosp. BVAB3 str. UPII9-5 rubredoxin YP_003475014.1 1096050 R 699246 CDS YP_003475013.1 289449422 8811376 complement(1096635..1096937) 1 NC_013895.2 identified by match to protein family HMM PF01985; YhbY family RNA-binding protein 1096937 8811376 HMPREF0868_0692 Clostridiales genomosp. BVAB3 str. UPII9-5 YhbY family RNA-binding protein YP_003475013.1 1096635 R 699246 CDS YP_003475012.1 289450752 8810689 complement(1097019..1098287) 1 NC_013895.2 identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM PF09269; match to protein family HMM TIGR02729; match to protein family HMM TIGR03595; Obg family GTPase CgtA 1098287 cgtA 8810689 cgtA Clostridiales genomosp. BVAB3 str. UPII9-5 Obg family GTPase CgtA YP_003475012.1 1097019 R 699246 CDS YP_003475011.1 289450084 8811228 complement(1098420..1098704) 1 NC_013895.2 identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; 50S ribosomal protein L27 1098704 rpmA 8811228 rpmA Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L27 YP_003475011.1 1098420 R 699246 CDS YP_003475010.1 289450611 8810495 complement(1098724..1099056) 1 NC_013895.2 identified by match to protein family HMM PF04327; hypothetical protein 1099056 8810495 HMPREF0868_0689 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475010.1 1098724 R 699246 CDS YP_003475009.1 289449894 8810266 complement(1099078..1099386) 1 NC_013895.2 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 1099386 rplU 8810266 rplU Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L21 YP_003475009.1 1099078 R 699246 CDS YP_003475008.1 289449670 8811087 complement(1099533..1100822) 1 NC_013895.2 identified by match to protein family HMM PF00375; putative proton/sodium-glutamate symport protein GltT 1100822 8811087 HMPREF0868_0687 Clostridiales genomosp. BVAB3 str. UPII9-5 putative proton/sodium-glutamate symport protein GltT YP_003475008.1 1099533 R 699246 CDS YP_003475007.1 289450473 8810033 complement(1101110..1102768) 1 NC_013895.2 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03994; coproporphyrinogen dehydrogenase HemZ 1102768 hemZ 8810033 hemZ Clostridiales genomosp. BVAB3 str. UPII9-5 coproporphyrinogen dehydrogenase HemZ YP_003475007.1 1101110 R 699246 CDS YP_003475006.1 289449444 8811369 complement(1102776..1103480) 1 NC_013895.2 identified by match to protein family HMM PF00702; HAD hydrolase 1103480 8811369 HMPREF0868_0685 Clostridiales genomosp. BVAB3 str. UPII9-5 HAD hydrolase YP_003475006.1 1102776 R 699246 CDS YP_003475005.1 289450745 8811173 complement(1103477..1104031) 1 NC_013895.2 hypothetical protein 1104031 8811173 HMPREF0868_0684 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475005.1 1103477 R 699246 CDS YP_003475004.1 289450556 8810337 complement(1104235..1105206) 1 NC_013895.2 identified by match to protein family HMM TIGR00044; pyridoxal phosphate enzyme, YggS family 1105206 8810337 HMPREF0868_0683 Clostridiales genomosp. BVAB3 str. UPII9-5 pyridoxal phosphate enzyme, YggS family YP_003475004.1 1104235 R 699246 CDS YP_003475003.1 289449739 8811237 complement(1105199..1106899) 1 NC_013895.2 hypothetical protein 1106899 8811237 HMPREF0868_0682 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475003.1 1105199 R 699246 CDS YP_003475002.1 289450620 8811514 complement(1107013..1108326) 1 NC_013895.2 identified by match to protein family HMM PF06838; aluminum resistance protein 1108326 8811514 HMPREF0868_0681 Clostridiales genomosp. BVAB3 str. UPII9-5 aluminum resistance protein YP_003475002.1 1107013 R 699246 CDS YP_003475001.1 289450097 8810803 complement(1108564..1108704) 1 NC_013895.2 hypothetical protein 1108704 8810803 HMPREF0868_0679 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003475001.1 1108564 R 699246 CDS YP_003475000.1 289450195 8811067 complement(1108674..1109891) 1 NC_013895.2 identified by match to protein family HMM PF02274; arginine deiminase 1109891 arcA 8811067 arcA Clostridiales genomosp. BVAB3 str. UPII9-5 arginine deiminase YP_003475000.1 1108674 R 699246 CDS YP_003474999.1 289450453 8810177 complement(1110154..1110579) 1 NC_013895.2 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1110579 8810177 HMPREF0868_0677 Clostridiales genomosp. BVAB3 str. UPII9-5 MarR family transcriptional regulator YP_003474999.1 1110154 R 699246 CDS YP_003474998.1 289449584 8810528 complement(1110851..1112530) 1 NC_013895.2 putative lipoprotein 1112530 8810528 HMPREF0868_0676 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003474998.1 1110851 R 699246 CDS YP_003474996.1 289450602 8811321 1113266..1113706 1 NC_013895.2 identified by match to protein family HMM PF01325; match to protein family HMM PF02742; transcriptional regulator MntR family protein 1113706 8811321 HMPREF0868_0674 Clostridiales genomosp. BVAB3 str. UPII9-5 transcriptional regulator MntR family protein YP_003474996.1 1113266 D 699246 CDS YP_003474995.1 289450698 8810613 complement(1113967..1114491) 1 NC_013895.2 identified by match to protein family HMM PF00665; putative transposase InsK for insertion sequence IS150 1114491 8810613 HMPREF0868_0673 Clostridiales genomosp. BVAB3 str. UPII9-5 putative transposase InsK for insertion sequence IS150 YP_003474995.1 1113967 R 699246 CDS YP_003474994.1 289450009 8810497 complement(1114515..1115093) 1 NC_013895.2 identified by match to protein family HMM PF01527; transposase 1115093 8810497 HMPREF0868_0672 Clostridiales genomosp. BVAB3 str. UPII9-5 transposase YP_003474994.1 1114515 R 699246 CDS YP_003474993.1 289449896 8811214 complement(1115280..1116710) 1 NC_013895.2 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1116710 8811214 HMPREF0868_0671 Clostridiales genomosp. BVAB3 str. UPII9-5 efflux ABC transporter permease YP_003474993.1 1115280 R 699246 CDS YP_003474992.1 289450597 8810710 complement(1116719..1118500) 1 NC_013895.2 identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1118500 8810710 HMPREF0868_0670 Clostridiales genomosp. BVAB3 str. UPII9-5 LPXTG-motif cell wall anchor domain-containing protein YP_003474992.1 1116719 R 699246 CDS YP_003474991.1 289450105 8810132 complement(1118515..1119336) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1119336 8810132 HMPREF0868_0669 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474991.1 1118515 R 699246 CDS YP_003474990.1 289449540 8809959 complement(1119585..1120940) 1 NC_013895.2 identified by match to protein family HMM PF02447; match to protein family HMM PF03600; gluconate:H+ symporter (GntP) family protein 1120940 8809959 HMPREF0868_0668 Clostridiales genomosp. BVAB3 str. UPII9-5 gluconate:H+ symporter (GntP) family protein YP_003474990.1 1119585 R 699246 CDS YP_003474989.1 289449375 8811064 complement(1120982..1122325) 1 NC_013895.2 identified by match to protein family HMM PF00291; match to protein family HMM TIGR02035; D-serine ammonia-lyase 1122325 dsdA 8811064 dsdA Clostridiales genomosp. BVAB3 str. UPII9-5 D-serine ammonia-lyase YP_003474989.1 1120982 R 699246 CDS YP_003474988.1 289450450 8810147 complement(1122780..1125056) 1 NC_013895.2 identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase (NAD+) 1125056 ligA 8810147 ligA Clostridiales genomosp. BVAB3 str. UPII9-5 DNA ligase (NAD+) YP_003474988.1 1122780 R 699246 CDS YP_003474987.1 289449555 8811231 complement(1125053..1125301) 1 NC_013895.2 hypothetical protein 1125301 8811231 HMPREF0868_0665 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474987.1 1125053 R 699246 CDS YP_003474986.1 289450614 8810557 1125346..1126443 1 NC_013895.2 identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 1126443 8810557 HMPREF0868_0664 Clostridiales genomosp. BVAB3 str. UPII9-5 Ser/Thr phosphatase family protein YP_003474986.1 1125346 D 699246 CDS YP_003474985.1 289449953 8811457 complement(1126569..1127495) 1 NC_013895.2 identified by match to protein family HMM PF01544; CorA-like protein 1127495 8811457 HMPREF0868_0663 Clostridiales genomosp. BVAB3 str. UPII9-5 CorA-like protein YP_003474985.1 1126569 R 699246 CDS YP_003474984.1 289450827 8811013 complement(1127654..1128436) 1 NC_013895.2 identified by match to protein family HMM PF00565; nuclease-like protein 1128436 8811013 HMPREF0868_0662 Clostridiales genomosp. BVAB3 str. UPII9-5 nuclease-like protein YP_003474984.1 1127654 R 699246 CDS YP_003474983.1 289450399 8810300 1128660..1130342 1 NC_013895.2 identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD dependent oxidoreductase 1130342 8810300 HMPREF0868_0661 Clostridiales genomosp. BVAB3 str. UPII9-5 FAD dependent oxidoreductase YP_003474983.1 1128660 D 699246 CDS YP_003474982.1 289449703 8810724 complement(1130347..1131168) 1 NC_013895.2 identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; match to protein family HMM TIGR01700; purine nucleoside phosphorylase I, inosine and guanosine-specific 1131168 8810724 HMPREF0868_0660 Clostridiales genomosp. BVAB3 str. UPII9-5 purine nucleoside phosphorylase I, inosine and guanosine-specific YP_003474982.1 1130347 R 699246 CDS YP_003474981.1 289450119 8811213 complement(1131197..1131925) 1 NC_013895.2 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; cyclic nucleotide-binding domain-containing protein 1131925 8811213 HMPREF0868_0659 Clostridiales genomosp. BVAB3 str. UPII9-5 cyclic nucleotide-binding domain-containing protein YP_003474981.1 1131197 R 699246 CDS YP_003474980.1 289450596 8810857 complement(1131915..1132895) 1 NC_013895.2 identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430; adenosine deaminase 1132895 add 8810857 add Clostridiales genomosp. BVAB3 str. UPII9-5 adenosine deaminase YP_003474980.1 1131915 R 699246 CDS YP_003474979.1 289450249 8810692 complement(1133045..1134178) 1 NC_013895.2 identified by match to protein family HMM PF02608; basic membrane protein 1134178 8810692 HMPREF0868_0657 Clostridiales genomosp. BVAB3 str. UPII9-5 basic membrane protein YP_003474979.1 1133045 R 699246 CDS YP_003474978.1 289450087 8811025 complement(1134234..1134887) 1 NC_013895.2 identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase 1134887 deoC 8811025 deoC Clostridiales genomosp. BVAB3 str. UPII9-5 deoxyribose-phosphate aldolase YP_003474978.1 1134234 R 699246 CDS YP_003474977.1 289450411 8809951 complement(1134957..1136288) 1 NC_013895.2 identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase 1136288 pyn 8809951 pyn Clostridiales genomosp. BVAB3 str. UPII9-5 pyrimidine-nucleoside phosphorylase YP_003474977.1 1134957 R 699246 CDS YP_003474976.1 289449367 8810302 complement(1136395..1137348) 1 NC_013895.2 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 1137348 8810302 HMPREF0868_0654 Clostridiales genomosp. BVAB3 str. UPII9-5 branched-chain amino acid ABC transporter permease YP_003474976.1 1136395 R 699246 CDS YP_003474975.1 289449705 8811019 complement(1137350..1138492) 1 NC_013895.2 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 1138492 8811019 HMPREF0868_0653 Clostridiales genomosp. BVAB3 str. UPII9-5 branched-chain amino acid ABC transporter permease YP_003474975.1 1137350 R 699246 CDS YP_003474974.1 289450405 8810678 complement(1138482..1140014) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1140014 8810678 HMPREF0868_0652 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474974.1 1138482 R 699246 CDS YP_003474973.1 289450073 8809973 complement(1140045..1140455) 1 NC_013895.2 identified by match to protein family HMM PF00383; match to protein family HMM PF08211; match to protein family HMM TIGR01354; cytidine deaminase 1140455 cdd 8809973 cdd Clostridiales genomosp. BVAB3 str. UPII9-5 cytidine deaminase YP_003474973.1 1140045 R 699246 CDS YP_003474972.1 289449387 8810438 complement(1140723..1141934) 1 NC_013895.2 identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1141934 coaBC 8810438 coaBC Clostridiales genomosp. BVAB3 str. UPII9-5 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_003474972.1 1140723 R 699246 CDS YP_003474971.1 289449837 8811363 complement(1142000..1144657) 1 NC_013895.2 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422; valine--tRNA ligase 1144657 valS 8811363 valS Clostridiales genomosp. BVAB3 str. UPII9-5 valine--tRNA ligase YP_003474971.1 1142000 R 699246 CDS YP_003474970.1 289450739 8811246 complement(1144701..1144958) 1 NC_013895.2 hypothetical protein 1144958 8811246 HMPREF0868_0648 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474970.1 1144701 R 699246 CDS YP_003474969.1 289450627 8811226 complement(1144946..1145833) 1 NC_013895.2 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 1145833 8811226 HMPREF0868_0647 Clostridiales genomosp. BVAB3 str. UPII9-5 inositol monophosphatase family protein YP_003474969.1 1144946 R 699246 CDS YP_003474968.1 289450609 8810084 complement(1145886..1146800) 1 NC_013895.2 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 1146800 ftsY 8810084 ftsY Clostridiales genomosp. BVAB3 str. UPII9-5 signal recognition particle-docking protein FtsY YP_003474968.1 1145886 R 699246 CDS YP_003474967.1 289449493 8810980 complement(1146887..1150480) 1 NC_013895.2 identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC 1150480 smc 8810980 smc Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome segregation protein SMC YP_003474967.1 1146887 R 699246 CDS YP_003474966.1 289450366 8810030 complement(1150471..1151208) 1 NC_013895.2 identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III 1151208 rnc 8810030 rnc Clostridiales genomosp. BVAB3 str. UPII9-5 ribonuclease III YP_003474966.1 1150471 R 699246 CDS YP_003474965.1 289449441 8810728 complement(1151226..1151459) 1 NC_013895.2 hypothetical protein 1151459 8810728 HMPREF0868_0643 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474965.1 1151226 R 699246 CDS YP_003474964.1 289450123 8810478 complement(1151452..1153020) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 1153020 8810478 HMPREF0868_0642 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474964.1 1151452 R 699246 CDS YP_003474963.1 289449877 8811142 complement(1153013..1153999) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 1153999 8811142 HMPREF0868_0641 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474963.1 1153013 R 699246 CDS YP_003474962.1 289450526 8810666 complement(1154010..1155818) 1 NC_013895.2 identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter permease AppC 1155818 8810666 HMPREF0868_0640 Clostridiales genomosp. BVAB3 str. UPII9-5 putative oligopeptide ABC transporter permease AppC YP_003474962.1 1154010 R 699246 CDS YP_003474961.1 289450061 8811395 complement(1155833..1156819) 1 NC_013895.2 identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter permease AppB 1156819 8811395 HMPREF0868_0639 Clostridiales genomosp. BVAB3 str. UPII9-5 putative oligopeptide ABC transporter permease AppB YP_003474961.1 1155833 R 699246 CDS YP_003474960.1 289450770 8810599 complement(1156918..1158918) 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 1158918 8810599 HMPREF0868_0638 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003474960.1 1156918 R 699246 CDS YP_003474959.1 289449995 8811475 complement(1159081..1159320) 1 NC_013895.2 identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517; acyl carrier protein 1159320 acpP 8811475 acpP Clostridiales genomosp. BVAB3 str. UPII9-5 acyl carrier protein YP_003474959.1 1159081 R 699246 CDS YP_003474958.2 308513248 8810767 complement(1159448..1160053) 1 NC_013895.2 hypothetical protein 1160053 8810767 HMPREF0868_0636 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474958.2 1159448 R 699246 CDS YP_003474957.1 289450160 8810072 complement(1161440..1162033) 1 NC_013895.2 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1162033 pgsA 8810072 pgsA Clostridiales genomosp. BVAB3 str. UPII9-5 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003474957.1 1161440 R 699246 CDS YP_003474956.1 289449481 8810958 complement(1162050..1163411) 1 NC_013895.2 identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; ribosomal protein S12 methylthiotransferase RimO 1163411 rimO 8810958 rimO Clostridiales genomosp. BVAB3 str. UPII9-5 ribosomal protein S12 methylthiotransferase RimO YP_003474956.1 1162050 R 699246 CDS YP_003474955.1 289450346 8810208 complement(1163408..1164235) 1 NC_013895.2 identified by match to protein family HMM PF02631; regulatory protein RecX 1164235 recX 8810208 recX Clostridiales genomosp. BVAB3 str. UPII9-5 regulatory protein RecX YP_003474955.1 1163408 R 699246 CDS YP_003474954.1 289449615 8810214 complement(1164235..1165386) 1 NC_013895.2 identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; protein RecA 1165386 recA 8810214 recA Clostridiales genomosp. BVAB3 str. UPII9-5 protein RecA YP_003474954.1 1164235 R 699246 CDS YP_003474953.1 289449621 8811078 complement(1165520..1167355) 1 NC_013895.2 identified by match to protein family HMM PF03023; putative integral membrane protein MviN 1167355 8811078 HMPREF0868_0631 Clostridiales genomosp. BVAB3 str. UPII9-5 putative integral membrane protein MviN YP_003474953.1 1165520 R 699246 CDS YP_003474952.1 289450464 8811422 complement(1167366..1168709) 1 NC_013895.2 identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence/damage-inducible protein CinA N-terminal domain-containing protein 1168709 8811422 HMPREF0868_0630 Clostridiales genomosp. BVAB3 str. UPII9-5 competence/damage-inducible protein CinA N-terminal domain-containing protein YP_003474952.1 1167366 R 699246 CDS YP_003474951.1 289450794 8810769 complement(1168694..1169563) 1 NC_013895.2 identified by match to protein family HMM PF00763; match to protein family HMM PF02882; tetrahydrofolate dehydrogenase/cyclohydrolase 1169563 folD 8810769 folD Clostridiales genomosp. BVAB3 str. UPII9-5 tetrahydrofolate dehydrogenase/cyclohydrolase YP_003474951.1 1168694 R 699246 CDS YP_003474950.1 289450162 8811148 complement(1169645..1173124) 1 NC_013895.2 identified by match to protein family HMM PF01580; match to protein family HMM PF09397; putative stage III sporulation protein E 1173124 8811148 HMPREF0868_0628 Clostridiales genomosp. BVAB3 str. UPII9-5 putative stage III sporulation protein E YP_003474950.1 1169645 R 699246 CDS YP_003474949.1 289450532 8810564 complement(1173124..1173699) 1 NC_013895.2 identified by match to protein family HMM PF00293; NUDIX family hydrolase 1173699 8810564 HMPREF0868_0627 Clostridiales genomosp. BVAB3 str. UPII9-5 NUDIX family hydrolase YP_003474949.1 1173124 R 699246 CDS YP_003474948.1 289449960 8810945 complement(1173746..1174216) 1 NC_013895.2 identified by match to protein family HMM PF00075; ribonuclease HI 1174216 rnhA 8810945 rnhA Clostridiales genomosp. BVAB3 str. UPII9-5 ribonuclease HI YP_003474948.1 1173746 R 699246 CDS YP_003474947.1 289450333 8810219 complement(1174234..1175232) 1 NC_013895.2 identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophan--tRNA ligase 1175232 trpS 8810219 trpS Clostridiales genomosp. BVAB3 str. UPII9-5 tryptophan--tRNA ligase YP_003474947.1 1174234 R 699246 CDS YP_003474946.1 289449626 8811554 complement(1175352..1175540) 1 NC_013895.2 hypothetical protein 1175540 8811554 HMPREF0868_0624 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474946.1 1175352 R 699246 CDS YP_003474945.1 289450143 8811452 1175799..1176335 1 NC_013895.2 identified by match to protein family HMM PF00156; phosphoribosyl transferase domain-containing protein 1176335 8811452 HMPREF0868_0622 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphoribosyl transferase domain-containing protein YP_003474945.1 1175799 D 699246 CDS YP_003474944.1 289450822 8811404 complement(1176397..1180374) 1 NC_013895.2 identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 1180374 dnaE 8811404 dnaE Clostridiales genomosp. BVAB3 str. UPII9-5 DNA polymerase III subunit alpha YP_003474944.1 1176397 R 699246 CDS YP_003474943.1 289450779 8810345 complement(1180390..1182132) 1 NC_013895.2 identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; putative phosphoglucomutase 1182132 8810345 HMPREF0868_0620 Clostridiales genomosp. BVAB3 str. UPII9-5 putative phosphoglucomutase YP_003474943.1 1180390 R 699246 CDS YP_003474942.1 289449747 8811005 complement(1182186..1184417) 1 NC_013895.2 identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM PF04851; match to protein family HMM TIGR00631; excinuclease ABC subunit B 1184417 uvrB 8811005 uvrB Clostridiales genomosp. BVAB3 str. UPII9-5 excinuclease ABC subunit B YP_003474942.1 1182186 R 699246 CDS YP_003474941.1 289450391 8810516 complement(1184426..1186384) 1 NC_013895.2 identified by match to protein family HMM PF00183; match to protein family HMM PF02518; Hsp90 protein 1186384 8810516 HMPREF0868_0618 Clostridiales genomosp. BVAB3 str. UPII9-5 Hsp90 protein YP_003474941.1 1184426 R 699246 CDS YP_003474940.1 289449913 8809969 complement(1186441..1186965) 1 NC_013895.2 identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-[acyl-carrier-protein] synthase 1186965 acpS 8809969 acpS Clostridiales genomosp. BVAB3 str. UPII9-5 holo-[acyl-carrier-protein] synthase YP_003474940.1 1186441 R 699246 CDS YP_003474939.1 289449384 8811051 complement(1186962..1188017) 1 NC_013895.2 hypothetical protein 1188017 8811051 HMPREF0868_0616 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474939.1 1186962 R 699246 CDS YP_003474938.1 289450437 8810319 complement(1188038..1189336) 1 NC_013895.2 identified by match to protein family HMM TIGR01446; DnaD and phage-associated domain-containing protein 1189336 8810319 HMPREF0868_0615 Clostridiales genomosp. BVAB3 str. UPII9-5 DnaD and phage-associated domain-containing protein YP_003474938.1 1188038 R 699246 CDS YP_003474937.1 289449721 8810818 complement(1189396..1189521) 1 NC_013895.2 hypothetical protein 1189521 8810818 HMPREF0868_0614 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474937.1 1189396 R 699246 CDS YP_003474936.1 289450210 8810469 complement(1189583..1193131) 1 NC_013895.2 identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate synthase 1193131 nifJ 8810469 nifJ Clostridiales genomosp. BVAB3 str. UPII9-5 pyruvate synthase YP_003474936.1 1189583 R 699246 CDS YP_003474934.1 289450725 8811511 complement(1193403..1193516) 1 NC_013895.2 hypothetical protein 1193516 8811511 HMPREF0868_0611 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474934.1 1193403 R 699246 CDS YP_003474933.1 289450877 8810120 complement(1193551..1195506) 1 NC_013895.2 identified by match to protein family HMM PF00121; match to protein family HMM PF00162; match to protein family HMM TIGR00419; triose-phosphate isomerase 1195506 tpiA 8810120 tpiA Clostridiales genomosp. BVAB3 str. UPII9-5 triose-phosphate isomerase YP_003474933.1 1193551 R 699246 CDS YP_003474932.1 289449528 8810788 1195669..1196256 1 NC_013895.2 hypothetical protein 1196256 8810788 HMPREF0868_0609 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474932.1 1195669 D 699246 CDS YP_003474931.1 289450181 8811029 1196237..1196932 1 NC_013895.2 identified by match to protein family HMM PF02698; hypothetical protein 1196932 8811029 HMPREF0868_0608 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474931.1 1196237 D 699246 CDS YP_003474930.1 289450415 8810375 complement(1196936..1198351) 1 NC_013895.2 identified by match to protein family HMM PF00905; penicillin-binding protein 1198351 8810375 HMPREF0868_0607 Clostridiales genomosp. BVAB3 str. UPII9-5 penicillin-binding protein YP_003474930.1 1196936 R 699246 CDS YP_003474929.1 289449777 8811250 complement(1198361..1200304) 1 NC_013895.2 identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family 1200304 8811250 HMPREF0868_0606 Clostridiales genomosp. BVAB3 str. UPII9-5 cell cycle protein, FtsW/RodA/SpoVE family YP_003474929.1 1198361 R 699246 CDS YP_003474928.1 289450631 8810735 complement(1200665..1200811) 1 NC_013895.2 hypothetical protein 1200811 8810735 HMPREF0868_0605 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474928.1 1200665 R 699246 CDS YP_003474927.1 289450130 8810547 1200930..1201439 1 NC_013895.2 hypothetical protein 1201439 8810547 HMPREF0868_0604 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474927.1 1200930 D 699246 CDS YP_003474926.1 289449943 8810138 1201567..1202922 1 NC_013895.2 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM PF03721; TrkA N-terminal domain-containing protein 1202922 8810138 HMPREF0868_0603 Clostridiales genomosp. BVAB3 str. UPII9-5 TrkA N-terminal domain-containing protein YP_003474926.1 1201567 D 699246 CDS YP_003474925.1 289449546 8811428 1202970..1204427 1 NC_013895.2 identified by match to protein family HMM PF02386; potassium uptake protein, TrkH family 1204427 8811428 HMPREF0868_0601 Clostridiales genomosp. BVAB3 str. UPII9-5 potassium uptake protein, TrkH family YP_003474925.1 1202970 D 699246 CDS YP_003474924.1 289450800 8810785 complement(1204424..1205785) 1 NC_013895.2 identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 1205785 mgtE 8810785 mgtE Clostridiales genomosp. BVAB3 str. UPII9-5 magnesium transporter YP_003474924.1 1204424 R 699246 CDS YP_003474923.1 289450178 8811361 complement(1205860..1206006) 1 NC_013895.2 hypothetical protein 1206006 8811361 HMPREF0868_0600 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474923.1 1205860 R 699246 CDS YP_003474922.1 289450737 8810483 1206036..1207220 1 NC_013895.2 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; NAD-binding domain-containing oxidoreductase 1207220 8810483 HMPREF0868_0599 Clostridiales genomosp. BVAB3 str. UPII9-5 NAD-binding domain-containing oxidoreductase YP_003474922.1 1206036 D 699246 CDS YP_003474921.1 289449882 8810309 complement(1207331..1208635) 1 NC_013895.2 hypothetical protein 1208635 8810309 HMPREF0868_0598 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474921.1 1207331 R 699246 CDS YP_003474920.1 289449712 8810948 complement(1208772..1209596) 1 NC_013895.2 hypothetical protein 1209596 8810948 HMPREF0868_0597 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474920.1 1208772 R 699246 CDS YP_003474919.1 289450336 8810746 complement(1209792..1211318) 1 NC_013895.2 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase 1211318 glpK 8810746 glpK Clostridiales genomosp. BVAB3 str. UPII9-5 glycerol kinase YP_003474919.1 1209792 R 699246 CDS YP_003474918.1 289450141 8810071 complement(1211736..1213343) 1 NC_013895.2 identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1213343 8810071 HMPREF0868_0595 Clostridiales genomosp. BVAB3 str. UPII9-5 LPXTG-motif cell wall anchor domain-containing protein YP_003474918.1 1211736 R 699246 CDS YP_003474917.1 289449480 8810685 complement(1213367..1213504) 1 NC_013895.2 hypothetical protein 1213504 8810685 HMPREF0868_0594 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474917.1 1213367 R 699246 CDS YP_003474916.1 289450080 8810115 complement(1214250..1216619) 1 NC_013895.2 hypothetical protein 1216619 8810115 HMPREF0868_0593 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474916.1 1214250 R 699246 CDS YP_003474915.1 289449523 8810851 complement(1216768..1218015) 1 NC_013895.2 identified by match to protein family HMM PF02515; cinnamoyl-CoA:phenyllactate CoA-transferase 1218015 fldA 8810851 fldA Clostridiales genomosp. BVAB3 str. UPII9-5 cinnamoyl-CoA:phenyllactate CoA-transferase YP_003474915.1 1216768 R 699246 CDS YP_003474914.1 289450243 8811406 complement(1218041..1219069) 1 NC_013895.2 identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein 1219069 etfA 8811406 etfA Clostridiales genomosp. BVAB3 str. UPII9-5 electron transfer flavoprotein YP_003474914.1 1218041 R 699246 CDS YP_003474913.1 289450781 8810490 complement(1219086..1219871) 1 NC_013895.2 identified by match to protein family HMM PF01012; electron transfer flavoprotein domain-containing protein 1219871 8810490 HMPREF0868_0590 Clostridiales genomosp. BVAB3 str. UPII9-5 electron transfer flavoprotein domain-containing protein YP_003474913.1 1219086 R 699246 CDS YP_003474912.1 289449889 8811075 complement(1219880..1221019) 1 NC_013895.2 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; putative butyryl-CoA dehydrogenase 1221019 8811075 HMPREF0868_0589 Clostridiales genomosp. BVAB3 str. UPII9-5 putative butyryl-CoA dehydrogenase YP_003474912.1 1219880 R 699246 CDS YP_003474911.1 289450461 8811202 complement(1221031..1222644) 1 NC_013895.2 identified by match to protein family HMM PF00501; AMP-binding enzyme 1222644 8811202 HMPREF0868_0588 Clostridiales genomosp. BVAB3 str. UPII9-5 AMP-binding enzyme YP_003474911.1 1221031 R 699246 CDS YP_003474910.1 289450585 8811393 complement(1222749..1223870) 1 NC_013895.2 identified by match to protein family HMM PF06050; putative R-phenyllactate dehydratase small subunit 1223870 8811393 HMPREF0868_0587 Clostridiales genomosp. BVAB3 str. UPII9-5 putative R-phenyllactate dehydratase small subunit YP_003474910.1 1222749 R 699246 CDS YP_003474909.1 289450768 8809970 complement(1223873..1225141) 1 NC_013895.2 identified by match to protein family HMM PF06050; R-phenyllactate dehydratase medium subunit 1225141 fldB 8809970 fldB Clostridiales genomosp. BVAB3 str. UPII9-5 R-phenyllactate dehydratase medium subunit YP_003474909.1 1223873 R 699246 CDS YP_003474908.1 289449385 8810549 complement(1225234..1226013) 1 NC_013895.2 identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; (R)-2-hydroxyglutaryl-CoA dehydratase activator 1226013 hgdC 8810549 hgdC Clostridiales genomosp. BVAB3 str. UPII9-5 (R)-2-hydroxyglutaryl-CoA dehydratase activator YP_003474908.1 1225234 R 699246 CDS YP_003474907.1 289449945 8810659 complement(1226256..1227416) 1 NC_013895.2 hypothetical protein 1227416 8810659 HMPREF0868_0584 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474907.1 1226256 R 699246 CDS YP_003474906.1 289450054 8811352 complement(1227650..1227766) 1 NC_013895.2 hypothetical protein 1227766 8811352 HMPREF0868_0583 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474906.1 1227650 R 699246 CDS YP_003474905.1 289450728 8811014 complement(1227790..1229091) 1 NC_013895.2 hypothetical protein 1229091 8811014 HMPREF0868_0582 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474905.1 1227790 R 699246 CDS YP_003474904.1 289450400 8811161 complement(1229191..1230357) 1 NC_013895.2 hypothetical protein 1230357 8811161 HMPREF0868_0581 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474904.1 1229191 R 699246 CDS YP_003474903.1 289450544 8810327 complement(1230781..1232088) 1 NC_013895.2 identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; putative uracil permease (uracil transporter) 1232088 8810327 HMPREF0868_0580 Clostridiales genomosp. BVAB3 str. UPII9-5 putative uracil permease (uracil transporter) YP_003474903.1 1230781 R 699246 CDS YP_003474902.1 289449729 8811015 complement(1232162..1233046) 1 NC_013895.2 identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase subunit alpha 1233046 sdaAA 8811015 sdaAA Clostridiales genomosp. BVAB3 str. UPII9-5 L-serine dehydratase subunit alpha YP_003474902.1 1232162 R 699246 CDS YP_003474901.1 289450401 8810062 complement(1233051..1233746) 1 NC_013895.2 identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase subunit beta 1233746 sdaAB 8810062 sdaAB Clostridiales genomosp. BVAB3 str. UPII9-5 L-serine dehydratase subunit beta YP_003474901.1 1233051 R 699246 CDS YP_003474900.1 289449471 8810174 1234076..1235521 1 NC_013895.2 hypothetical protein 1235521 8810174 HMPREF0868_0577 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474900.1 1234076 D 699246 CDS YP_003474899.1 289449581 8811382 complement(1235685..1236407) 1 NC_013895.2 identified by match to protein family HMM PF01182; match to protein family HMM TIGR00502; glucosamine-6-phosphate deaminase 1236407 nagB 8811382 nagB Clostridiales genomosp. BVAB3 str. UPII9-5 glucosamine-6-phosphate deaminase YP_003474899.1 1235685 R 699246 CDS YP_003474898.1 289450757 8810262 complement(1236477..1238120) 1 NC_013895.2 identified by match to protein family HMM PF00155; class I/II aminotransferase 1238120 8810262 HMPREF0868_0575 Clostridiales genomosp. BVAB3 str. UPII9-5 class I/II aminotransferase YP_003474898.1 1236477 R 699246 CDS YP_003474897.1 289449666 8810967 complement(1238160..1239683) 1 NC_013895.2 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; putative Xaa-His dipeptidase 1239683 8810967 HMPREF0868_0574 Clostridiales genomosp. BVAB3 str. UPII9-5 putative Xaa-His dipeptidase YP_003474897.1 1238160 R 699246 CDS YP_003474896.1 289450353 8811189 1239839..1240957 1 NC_013895.2 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1240957 8811189 HMPREF0868_0573 Clostridiales genomosp. BVAB3 str. UPII9-5 endonuclease/exonuclease/phosphatase family protein YP_003474896.1 1239839 D 699246 CDS YP_003474895.1 289450572 8810706 1241203..1241343 1 NC_013895.2 hypothetical protein 1241343 8810706 HMPREF0868_0572 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474895.1 1241203 D 699246 CDS YP_003474894.1 289450101 8811370 complement(1241780..1243516) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1243516 8811370 HMPREF0868_0571 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474894.1 1241780 R 699246 CDS YP_003474893.1 289450746 8810107 complement(1243520..1245286) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1245286 8810107 HMPREF0868_0570 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474893.1 1243520 R 699246 CDS YP_003474892.1 289449515 8810757 complement(1245280..1246857) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1246857 8810757 HMPREF0868_0569 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474892.1 1245280 R 699246 CDS YP_003474891.1 289450151 8810372 complement(1246847..1247680) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1247680 8810372 HMPREF0868_0568 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474891.1 1246847 R 699246 CDS YP_003474890.1 289449774 8810973 complement(1247656..1248612) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1248612 8810973 HMPREF0868_0567 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474890.1 1247656 R 699246 CDS YP_003474889.1 289450359 8810069 complement(1248638..1250164) 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 1250164 8810069 HMPREF0868_0566 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003474889.1 1248638 R 699246 CDS YP_003474888.1 289449478 8811480 complement(1250783..1250929) 1 NC_013895.2 hypothetical protein 1250929 8811480 HMPREF0868_0565 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474888.1 1250783 R 699246 CDS YP_003474887.1 289450849 8810623 complement(1250938..1253133) 1 NC_013895.2 tetratricopeptide repeat protein 1253133 8810623 HMPREF0868_0564 Clostridiales genomosp. BVAB3 str. UPII9-5 tetratricopeptide repeat protein YP_003474887.1 1250938 R 699246 CDS YP_003474886.1 289450019 8810620 1253351..1254280 1 NC_013895.2 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 1254280 8810620 HMPREF0868_0563 Clostridiales genomosp. BVAB3 str. UPII9-5 sortase family protein YP_003474886.1 1253351 D 699246 CDS YP_003474885.1 289450016 8811304 complement(1254394..1255071) 1 NC_013895.2 identified by match to protein family HMM PF00005; putative bacteriocin ABC transporter 1255071 8811304 HMPREF0868_0562 Clostridiales genomosp. BVAB3 str. UPII9-5 putative bacteriocin ABC transporter YP_003474885.1 1254394 R 699246 CDS YP_003474884.1 289450682 8810432 complement(1255072..1257270) 1 NC_013895.2 hypothetical protein 1257270 8810432 HMPREF0868_0561 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474884.1 1255072 R 699246 CDS YP_003474883.1 289449833 8810143 complement(1257314..1257451) 1 NC_013895.2 hypothetical protein 1257451 8810143 HMPREF0868_0560 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474883.1 1257314 R 699246 CDS YP_003474882.1 289449551 8811248 complement(1257785..1260166) 1 NC_013895.2 identified by match to protein family HMM PF00343; match to protein family HMM TIGR02093; putative maltodextrin phosphorylase 1260166 8811248 HMPREF0868_0559 Clostridiales genomosp. BVAB3 str. UPII9-5 putative maltodextrin phosphorylase YP_003474882.1 1257785 R 699246 CDS YP_003474881.1 289450629 8810715 complement(1260242..1261603) 1 NC_013895.2 identified by match to protein family HMM PF09587; capsule synthesis protein 1261603 8810715 HMPREF0868_0558 Clostridiales genomosp. BVAB3 str. UPII9-5 capsule synthesis protein YP_003474881.1 1260242 R 699246 CDS YP_003474880.1 289450110 8811537 1261717..1263126 1 NC_013895.2 hypothetical protein 1263126 8811537 HMPREF0868_0557 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474880.1 1261717 D 699246 CDS YP_003474879.1 289449932 8811323 complement(1263604..1263756) 1 NC_013895.2 hypothetical protein 1263756 8811323 HMPREF0868_0555 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474879.1 1263604 R 699246 CDS YP_003474878.1 289450700 8810370 complement(1263743..1264168) 1 NC_013895.2 hypothetical protein 1264168 8810370 HMPREF0868_0554 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474878.1 1263743 R 699246 CDS YP_003474877.1 289449772 8810260 complement(1264152..1264346) 1 NC_013895.2 hypothetical protein 1264346 8810260 HMPREF0868_0553 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474877.1 1264152 R 699246 CDS YP_003474876.1 289449664 8810270 complement(1264347..1264481) 1 NC_013895.2 hypothetical protein 1264481 8810270 HMPREF0868_0552 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474876.1 1264347 R 699246 CDS YP_003474875.1 289449674 8810970 complement(1264572..1264772) 1 NC_013895.2 hypothetical protein 1264772 8810970 HMPREF0868_0551 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474875.1 1264572 R 699246 CDS YP_003474874.1 289450356 8810140 complement(1264876..1265385) 1 NC_013895.2 hypothetical protein 1265385 8810140 HMPREF0868_0550 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474874.1 1264876 R 699246 CDS YP_003474873.1 289449548 8810823 complement(1265469..1265648) 1 NC_013895.2 hypothetical protein 1265648 8810823 HMPREF0868_0549 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474873.1 1265469 R 699246 CDS YP_003474872.1 289450215 8811203 complement(1265722..1265949) 1 NC_013895.2 hypothetical protein 1265949 8811203 HMPREF0868_0548 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474872.1 1265722 R 699246 CDS YP_003474871.1 289450586 8810097 complement(1265936..1266226) 1 NC_013895.2 hypothetical protein 1266226 8810097 HMPREF0868_0547 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474871.1 1265936 R 699246 CDS YP_003474870.1 289449506 8810471 complement(1266219..1266533) 1 NC_013895.2 hypothetical protein 1266533 8810471 HMPREF0868_0546 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474870.1 1266219 R 699246 CDS YP_003474869.1 289449870 8811347 complement(1267481..1273402) 1 NC_013895.2 identified by match to protein family HMM PF00656; caspase domain-containing protein 1273402 8811347 HMPREF0868_0545 Clostridiales genomosp. BVAB3 str. UPII9-5 caspase domain-containing protein YP_003474869.1 1267481 R 699246 CDS YP_003474868.1 289450723 8810328 complement(1273560..1273676) 1 NC_013895.2 hypothetical protein 1273676 8810328 HMPREF0868_0544 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474868.1 1273560 R 699246 CDS YP_003474867.1 289449730 8811272 1273684..1274292 1 NC_013895.2 identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; septum formation protein Maf 1274292 maf 8811272 maf Clostridiales genomosp. BVAB3 str. UPII9-5 septum formation protein Maf YP_003474867.1 1273684 D 699246 CDS YP_003474866.1 289450652 8811438 complement(1274357..1274740) 1 NC_013895.2 hypothetical protein 1274740 8811438 HMPREF0868_0542 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474866.1 1274357 R 699246 CDS YP_003474865.1 289450808 8810555 1274931..1275665 1 NC_013895.2 identified by match to protein family HMM PF03009; glycerophosphodiester phosphodiesterase family protein 1275665 8810555 HMPREF0868_0541 Clostridiales genomosp. BVAB3 str. UPII9-5 glycerophosphodiester phosphodiesterase family protein YP_003474865.1 1274931 D 699246 CDS YP_003474864.1 289449951 8810034 1275765..1277201 1 NC_013895.2 identified by match to protein family HMM PF07690; major facilitator family transporter 1277201 8810034 HMPREF0868_0540 Clostridiales genomosp. BVAB3 str. UPII9-5 major facilitator family transporter YP_003474864.1 1275765 D 699246 CDS YP_003474863.1 289449445 8810794 1277365..1277532 1 NC_013895.2 hypothetical protein 1277532 8810794 HMPREF0868_0539 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474863.1 1277365 D 699246 CDS YP_003474862.1 289450187 8809937 1277605..1280250 1 NC_013895.2 identified by match to protein family HMM PF00465; aldehyde-alcohol dehydrogenase 2 1280250 adh2 8809937 adh2 Clostridiales genomosp. BVAB3 str. UPII9-5 aldehyde-alcohol dehydrogenase 2 YP_003474862.1 1277605 D 699246 CDS YP_003474861.2 308513249 8809945 1280656..1282596 1 NC_013895.2 identified by match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonine--tRNA ligase 1282596 thrS 8809945 thrS Clostridiales genomosp. BVAB3 str. UPII9-5 threonine--tRNA ligase YP_003474861.2 1280656 D 699246 CDS YP_003474860.1 289449361 8810856 1282671..1282784 1 NC_013895.2 hypothetical protein 1282784 8810856 HMPREF0868_0535 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474860.1 1282671 D 699246 CDS YP_003474859.1 289450248 8810569 1282867..1283313 1 NC_013895.2 identified by match to protein family HMM PF02583; putative copper-sensing transcriptional repressor CsoR 1283313 8810569 HMPREF0868_0534 Clostridiales genomosp. BVAB3 str. UPII9-5 putative copper-sensing transcriptional repressor CsoR YP_003474859.1 1282867 D 699246 CDS YP_003474858.1 289449965 8810426 complement(1283410..1283895) 1 NC_013895.2 identified by match to protein family HMM PF01047; putative organic hydroperoxide resistance transcriptional regulator 1283895 8810426 HMPREF0868_0533 Clostridiales genomosp. BVAB3 str. UPII9-5 putative organic hydroperoxide resistance transcriptional regulator YP_003474858.1 1283410 R 699246 CDS YP_003474857.1 289449827 8810232 complement(1284375..1285166) 1 NC_013895.2 identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 1285166 nrdG 8810232 nrdG Clostridiales genomosp. BVAB3 str. UPII9-5 anaerobic ribonucleoside-triphosphate reductase activating protein YP_003474857.1 1284375 R 699246 CDS YP_003474856.1 289449636 8810931 complement(1285138..1287348) 1 NC_013895.2 identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487; anaerobic ribonucleoside-triphosphate reductase 1287348 nrdD 8810931 nrdD Clostridiales genomosp. BVAB3 str. UPII9-5 anaerobic ribonucleoside-triphosphate reductase YP_003474856.1 1285138 R 699246 CDS YP_003474855.1 289450319 8810066 complement(1288077..1288541) 1 NC_013895.2 hypothetical protein 1288541 8810066 HMPREF0868_0530 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474855.1 1288077 R 699246 CDS YP_003474854.1 289449475 8810759 complement(1288799..1288948) 1 NC_013895.2 hypothetical protein 1288948 8810759 HMPREF0868_0529 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474854.1 1288799 R 699246 CDS YP_003474853.1 289450153 8810245 complement(1289172..1289663) 1 NC_013895.2 identified by match to protein family HMM PF08974; hypothetical protein 1289663 8810245 HMPREF0868_0528 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474853.1 1289172 R 699246 CDS YP_003474852.1 289449649 8810392 complement(1289629..1289766) 1 NC_013895.2 hypothetical protein 1289766 8810392 HMPREF0868_0527 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474852.1 1289629 R 699246 CDS YP_003474851.1 289449794 8809965 complement(1289826..1290074) 1 NC_013895.2 hypothetical protein 1290074 8809965 HMPREF0868_0526 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474851.1 1289826 R 699246 CDS YP_003933649.1 308513250 8810923 complement(1290191..1290478) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 1290478 8810923 HMPREF0868_0525 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933649.1 1290191 R 699246 CDS YP_003933650.1 308513251 8810195 complement(1290528..1290929) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1290929 8810195 HMPREF0868_0524 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933650.1 1290528 R 699246 CDS YP_003474850.1 289449602 8811045 complement(1290964..1291185) 1 NC_013895.2 hypothetical protein 1291185 8811045 HMPREF0868_0523 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474850.1 1290964 R 699246 CDS YP_003474849.1 289450431 8810378 complement(1291225..1291566) 1 NC_013895.2 tetratricopeptide repeat protein 1291566 8810378 HMPREF0868_0522 Clostridiales genomosp. BVAB3 str. UPII9-5 tetratricopeptide repeat protein YP_003474849.1 1291225 R 699246 CDS YP_003474848.1 289449780 8811334 complement(1291683..1292006) 1 NC_013895.2 hypothetical protein 1292006 8811334 HMPREF0868_0521 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474848.1 1291683 R 699246 CDS YP_003474847.1 289450710 8810643 complement(1292061..1292669) 1 NC_013895.2 hypothetical protein 1292669 8810643 HMPREF0868_0520 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474847.1 1292061 R 699246 CDS YP_003474846.1 289450039 8810979 complement(1292748..1294049) 1 NC_013895.2 hypothetical protein 1294049 8810979 HMPREF0868_0519 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474846.1 1292748 R 699246 CDS YP_003474845.1 289450365 8809971 1294446..1294562 1 NC_013895.2 RelE domain-containing toxin-antitoxin system toxin protein 1294562 8809971 HMPREF0868_0517 Clostridiales genomosp. BVAB3 str. UPII9-5 RelE domain-containing toxin-antitoxin system toxin protein YP_003474845.1 1294446 D 699246 CDS YP_003933651.1 308513252 8809984 complement(1294549..1294737) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1294737 8809984 HMPREF0868_0518 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933651.1 1294549 R 699246 CDS YP_003474844.1 289449398 8811486 complement(1295252..1295611) 1 NC_013895.2 hypothetical protein 1295611 8811486 HMPREF0868_0516 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474844.1 1295252 R 699246 CDS YP_003933652.1 308513253 8810053 complement(1295789..1296082) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1296082 8810053 HMPREF0868_0515 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933652.1 1295789 R 699246 CDS YP_003474843.1 289449462 8811519 complement(1296084..1296227) 1 NC_013895.2 hypothetical protein 1296227 8811519 HMPREF0868_0514 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474843.1 1296084 R 699246 CDS YP_003474842.1 289450276 8810283 complement(1296540..1297160) 1 NC_013895.2 hypothetical protein 1297160 8810283 HMPREF0868_0512 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474842.1 1296540 R 699246 CDS YP_003474841.1 289449687 8810989 complement(1297162..1298538) 1 NC_013895.2 hypothetical protein 1298538 8810989 HMPREF0868_0511 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474841.1 1297162 R 699246 CDS YP_003474840.1 289450375 8811319 1298688..1299902 1 NC_013895.2 identified by match to protein family HMM PF07221; N-acylglucosamine 2-epimerase 1299902 8811319 HMPREF0868_0510 Clostridiales genomosp. BVAB3 str. UPII9-5 N-acylglucosamine 2-epimerase YP_003474840.1 1298688 D 699246 CDS YP_003474839.1 289450696 8810387 1300057..1300980 1 NC_013895.2 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator 1300980 8810387 HMPREF0868_0509 Clostridiales genomosp. BVAB3 str. UPII9-5 RpiR family transcriptional regulator YP_003474839.1 1300057 D 699246 CDS YP_003474838.1 289449789 8811484 1301144..1302490 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1302490 8811484 HMPREF0868_0508 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474838.1 1301144 D 699246 CDS YP_003474837.1 289450853 8810611 1302624..1303532 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1303532 8810611 HMPREF0868_0507 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474837.1 1302624 D 699246 CDS YP_003474836.1 289450007 8810500 1303542..1304372 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1304372 8810500 HMPREF0868_0506 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474836.1 1303542 D 699246 CDS YP_003474835.1 289449899 8811413 1304515..1305420 1 NC_013895.2 identified by match to protein family HMM PF00701; putative N-acetylneuraminate lyase 1305420 8811413 HMPREF0868_0505 Clostridiales genomosp. BVAB3 str. UPII9-5 putative N-acetylneuraminate lyase YP_003474835.1 1304515 D 699246 CDS YP_003474834.1 289450786 8810684 1305433..1306563 1 NC_013895.2 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 1306563 nagA 8810684 nagA Clostridiales genomosp. BVAB3 str. UPII9-5 N-acetylglucosamine-6-phosphate deacetylase YP_003474834.1 1305433 D 699246 CDS YP_003474833.1 289450079 8811211 1306729..1307847 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; phycoerythrin, alpha/beta chain 1307847 8811211 HMPREF0868_0503 Clostridiales genomosp. BVAB3 str. UPII9-5 phycoerythrin, alpha/beta chain YP_003474833.1 1306729 D 699246 CDS YP_003474832.1 289450594 8810476 complement(1308079..1308894) 1 NC_013895.2 identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 1308894 thiD_2 8810476 thiD_2 Clostridiales genomosp. BVAB3 str. UPII9-5 phosphomethylpyrimidine kinase YP_003474832.1 1308079 R 699246 CDS YP_003474831.1 289449875 8810187 complement(1308924..1309607) 1 NC_013895.2 hypothetical protein 1309607 8810187 HMPREF0868_0501 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474831.1 1308924 R 699246 CDS YP_003474830.1 289449594 8811163 1309714..1310574 1 NC_013895.2 identified by match to protein family HMM PF00899; ThiF family protein 1310574 8811163 HMPREF0868_0500 Clostridiales genomosp. BVAB3 str. UPII9-5 ThiF family protein YP_003474830.1 1309714 D 699246 CDS YP_003474829.1 289450546 8810000 complement(1310654..1312396) 1 NC_013895.2 putative threonine synthase 1312396 8810000 HMPREF0868_0499 Clostridiales genomosp. BVAB3 str. UPII9-5 putative threonine synthase YP_003474829.1 1310654 R 699246 CDS YP_003474828.1 289449413 8810927 complement(1312645..1314219) 1 NC_013895.2 identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499; putative tetrahydrofolate synthase 1314219 8810927 HMPREF0868_0498 Clostridiales genomosp. BVAB3 str. UPII9-5 putative tetrahydrofolate synthase YP_003474828.1 1312645 R 699246 CDS YP_003474827.1 289450315 8810807 complement(1314222..1315061) 1 NC_013895.2 identified by match to protein family HMM PF04138; GtrA-like protein 1315061 8810807 HMPREF0868_0497 Clostridiales genomosp. BVAB3 str. UPII9-5 GtrA-like protein YP_003474827.1 1314222 R 699246 CDS YP_003474826.1 289450199 8811337 complement(1315048..1315782) 1 NC_013895.2 HD domain-containing protein 1315782 8811337 HMPREF0868_0496 Clostridiales genomosp. BVAB3 str. UPII9-5 HD domain-containing protein YP_003474826.1 1315048 R 699246 CDS YP_003474825.1 289450713 8810124 complement(1315804..1318353) 1 NC_013895.2 identified by match to protein family HMM PF00580; UvrD/REP helicase 1318353 8810124 HMPREF0868_0495 Clostridiales genomosp. BVAB3 str. UPII9-5 UvrD/REP helicase YP_003474825.1 1315804 R 699246 CDS YP_003474824.1 289449532 8810832 complement(1318535..1321603) 1 NC_013895.2 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; HsdR family type I site-specific deoxyribonuclease 1321603 8810832 HMPREF0868_0494 Clostridiales genomosp. BVAB3 str. UPII9-5 HsdR family type I site-specific deoxyribonuclease YP_003474824.1 1318535 R 699246 CDS YP_003474823.1 289450224 8810664 complement(1321697..1322887) 1 NC_013895.2 identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein 1322887 8810664 HMPREF0868_0493 Clostridiales genomosp. BVAB3 str. UPII9-5 type I restriction modification DNA specificity domain-containing protein YP_003474823.1 1321697 R 699246 CDS YP_003474822.1 289450059 8810514 complement(1322900..1323889) 1 NC_013895.2 identified by match to protein family HMM PF00589; phage integrase, N-terminal SAM domain-containing protein 1323889 8810514 HMPREF0868_0492 Clostridiales genomosp. BVAB3 str. UPII9-5 phage integrase, N-terminal SAM domain-containing protein YP_003474822.1 1322900 R 699246 CDS YP_003933653.1 308513254 8811387 1324595..1324711 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1324711 8811387 HMPREF0868_0490 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933653.1 1324595 D 699246 CDS YP_003474821.1 289450762 8811205 complement(1324708..1325244) 1 NC_013895.2 identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein 1325244 8811205 HMPREF0868_0491 Clostridiales genomosp. BVAB3 str. UPII9-5 type I restriction modification DNA specificity domain-containing protein YP_003474821.1 1324708 R 699246 CDS YP_003474820.1 289450588 8810780 complement(1325234..1326739) 1 NC_013895.2 identified by match to protein family HMM PF02384; putative type I restriction-modification system, M subunit 1326739 8810780 HMPREF0868_0489 Clostridiales genomosp. BVAB3 str. UPII9-5 putative type I restriction-modification system, M subunit YP_003474820.1 1325234 R 699246 CDS YP_003474819.1 289450173 8810268 complement(1326785..1326949) 1 NC_013895.2 hypothetical protein 1326949 8810268 HMPREF0868_0488 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474819.1 1326785 R 699246 CDS YP_003474818.1 289449672 8811462 complement(1327288..1327830) 1 NC_013895.2 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 1327830 raiA 8811462 raiA Clostridiales genomosp. BVAB3 str. UPII9-5 ribosomal subunit interface protein YP_003474818.1 1327288 R 699246 CDS YP_003474817.1 289450832 8811223 complement(1328004..1329305) 1 NC_013895.2 identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein 1329305 8811223 HMPREF0868_0486 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyltransferase group 2 family protein YP_003474817.1 1328004 R 699246 CDS YP_003474815.1 289450674 8810289 1329561..1330499 1 NC_013895.2 hydrolase, alpha/beta domain-containing protein 1330499 8810289 HMPREF0868_0483 Clostridiales genomosp. BVAB3 str. UPII9-5 hydrolase, alpha/beta domain-containing protein YP_003474815.1 1329561 D 699246 CDS YP_003474814.1 289449693 8810152 complement(1330457..1332382) 1 NC_013895.2 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 1332382 murE 8810152 murE Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_003474814.1 1330457 R 699246 CDS YP_003474813.1 289449560 8811502 complement(1332453..1332656) 1 NC_013895.2 hypothetical protein 1332656 8811502 HMPREF0868_0482 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474813.1 1332453 R 699246 CDS YP_003474812.1 289450869 8810376 1332656..1334023 1 NC_013895.2 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1334023 8810376 HMPREF0868_0481 Clostridiales genomosp. BVAB3 str. UPII9-5 MATE efflux family protein YP_003474812.1 1332656 D 699246 CDS YP_003474811.1 289449778 8810094 1334035..1334700 1 NC_013895.2 identified by match to protein family HMM PF00753; metallo-beta-lactamase domain-containing protein 1334700 8810094 HMPREF0868_0480 Clostridiales genomosp. BVAB3 str. UPII9-5 metallo-beta-lactamase domain-containing protein YP_003474811.1 1334035 D 699246 CDS YP_003474810.1 289449503 8810833 complement(1334754..1334876) 1 NC_013895.2 hypothetical protein 1334876 8810833 HMPREF0868_0479 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474810.1 1334754 R 699246 CDS YP_003474809.1 289450225 8810301 complement(1334960..1335391) 1 NC_013895.2 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1335391 8810301 HMPREF0868_0478 Clostridiales genomosp. BVAB3 str. UPII9-5 MarR family transcriptional regulator YP_003474809.1 1334960 R 699246 CDS YP_003474808.1 289449704 8810987 complement(1335433..1337478) 1 NC_013895.2 identified by match to protein family HMM PF01757; putative acyltransferase 1337478 8810987 HMPREF0868_0477 Clostridiales genomosp. BVAB3 str. UPII9-5 putative acyltransferase YP_003474808.1 1335433 R 699246 CDS YP_003474807.1 289450373 8810275 1337752..1338624 1 NC_013895.2 hypothetical protein 1338624 8810275 HMPREF0868_0476 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474807.1 1337752 D 699246 CDS YP_003474806.1 289449679 8810745 1338767..1338886 1 NC_013895.2 hypothetical protein 1338886 8810745 HMPREF0868_0475 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474806.1 1338767 D 699246 CDS YP_003474805.1 289450140 8809977 1338909..1339943 1 NC_013895.2 identified by match to protein family HMM PF01212; beta-eliminating lyase 1339943 8809977 HMPREF0868_0474 Clostridiales genomosp. BVAB3 str. UPII9-5 beta-eliminating lyase YP_003474805.1 1338909 D 699246 CDS YP_003474804.1 289449391 8811055 complement(1340032..1340802) 1 NC_013895.2 hypothetical protein 1340802 8811055 HMPREF0868_0473 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474804.1 1340032 R 699246 CDS YP_003474803.1 289450441 8811273 complement(1340832..1343606) 1 NC_013895.2 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence ClpC/MecB 1343606 clpC 8811273 clpC Clostridiales genomosp. BVAB3 str. UPII9-5 negative regulator of genetic competence ClpC/MecB YP_003474803.1 1340832 R 699246 CDS YP_003474802.1 289450653 8810373 complement(1343821..1345062) 1 NC_013895.2 identified by match to protein family HMM PF00217; ATP:guanido phosphotransferase, C-terminal catalytic domain-containing protein 1345062 8810373 HMPREF0868_0471 Clostridiales genomosp. BVAB3 str. UPII9-5 ATP:guanido phosphotransferase, C-terminal catalytic domain-containing protein YP_003474802.1 1343821 R 699246 CDS YP_003474801.1 289449775 8811441 complement(1345065..1345730) 1 NC_013895.2 identified by match to protein family HMM PF02151; hypothetical protein 1345730 8811441 HMPREF0868_0470 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474801.1 1345065 R 699246 CDS YP_003474800.1 289450811 8810744 complement(1345708..1346208) 1 NC_013895.2 identified by match to protein family HMM PF05848; putative transcriptional regulator 1346208 8810744 HMPREF0868_0469 Clostridiales genomosp. BVAB3 str. UPII9-5 putative transcriptional regulator YP_003474800.1 1345708 R 699246 CDS YP_003474799.1 289450139 8810038 complement(1346421..1346567) 1 NC_013895.2 hypothetical protein 1346567 8810038 HMPREF0868_0468 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474799.1 1346421 R 699246 CDS YP_003474798.1 289449448 8811288 complement(1346598..1347101) 1 NC_013895.2 hypothetical protein 1347101 8811288 HMPREF0868_0467 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474798.1 1346598 R 699246 CDS YP_003474797.1 289450666 8810629 complement(1347140..1347631) 1 NC_013895.2 Tat pathway signal sequence domain-containing protein 1347631 8810629 HMPREF0868_0466 Clostridiales genomosp. BVAB3 str. UPII9-5 Tat pathway signal sequence domain-containing protein YP_003474797.1 1347140 R 699246 CDS YP_003474796.1 289450025 8811541 1347793..1348590 1 NC_013895.2 identified by match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; HAD hydrolase 1348590 8811541 HMPREF0868_0465 Clostridiales genomosp. BVAB3 str. UPII9-5 HAD hydrolase YP_003474796.1 1347793 D 699246 CDS YP_003474795.1 289449746 8811468 complement(1348842..1350998) 1 NC_013895.2 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; putative bacteriochlorophyll 4-vinyl reductase 1350998 8811468 HMPREF0868_0463 Clostridiales genomosp. BVAB3 str. UPII9-5 putative bacteriochlorophyll 4-vinyl reductase YP_003474795.1 1348842 R 699246 CDS YP_003474794.1 289450837 8810675 complement(1351099..1351383) 1 NC_013895.2 hypothetical protein 1351383 8810675 HMPREF0868_0462 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474794.1 1351099 R 699246 CDS YP_003474793.1 289450070 8809953 complement(1351425..1351583) 1 NC_013895.2 hypothetical protein 1351583 8809953 HMPREF0868_0461 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474793.1 1351425 R 699246 CDS YP_003474792.1 289449369 8809955 1351582..1351716 1 NC_013895.2 hypothetical protein 1351716 8809955 HMPREF0868_0460 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474792.1 1351582 D 699246 CDS YP_003474791.1 289449371 8810994 1351877..1354300 1 NC_013895.2 identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1354300 8810994 HMPREF0868_0459 Clostridiales genomosp. BVAB3 str. UPII9-5 CAAX amino terminal protease family protein YP_003474791.1 1351877 D 699246 CDS YP_003474790.1 289450380 8810326 complement(1354323..1355702) 1 NC_013895.2 identified by match to protein family HMM PF01136; U32 family peptidase 1355702 8810326 HMPREF0868_0458 Clostridiales genomosp. BVAB3 str. UPII9-5 U32 family peptidase YP_003474790.1 1354323 R 699246 CDS YP_003474789.1 289449728 8810976 complement(1355715..1357004) 1 NC_013895.2 identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein 1357004 8810976 HMPREF0868_0457 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474789.1 1355715 R 699246 CDS YP_003474788.1 289450362 8810294 complement(1357055..1358896) 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 1358896 typA 8810294 typA Clostridiales genomosp. BVAB3 str. UPII9-5 GTP-binding protein TypA YP_003474788.1 1357055 R 699246 CDS YP_003474787.1 289449698 8810810 complement(1359012..1360337) 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03594; ribosome-associated GTPase EngA 1360337 engA 8810810 engA Clostridiales genomosp. BVAB3 str. UPII9-5 ribosome-associated GTPase EngA YP_003474787.1 1359012 R 699246 CDS YP_003474786.1 289450202 8810693 complement(1360291..1360416) 1 NC_013895.2 hypothetical protein 1360416 8810693 HMPREF0868_0454 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474786.1 1360291 R 699246 CDS YP_003474785.1 289450088 8811179 complement(1360416..1360607) 1 NC_013895.2 identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 1360607 rpmF 8811179 rpmF Clostridiales genomosp. BVAB3 str. UPII9-5 50S ribosomal protein L32 YP_003474785.1 1360416 R 699246 CDS YP_003474784.1 289450562 8810908 complement(1360637..1361173) 1 NC_013895.2 identified by match to protein family HMM PF02620; hypothetical protein 1361173 8810908 HMPREF0868_0452 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474784.1 1360637 R 699246 CDS YP_003474783.1 289450297 8811386 complement(1361301..1364033) 1 NC_013895.2 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517; calcium-translocating P-type ATPase 1364033 8811386 HMPREF0868_0451 Clostridiales genomosp. BVAB3 str. UPII9-5 calcium-translocating P-type ATPase YP_003474783.1 1361301 R 699246 CDS YP_003474782.1 289450761 8811108 1364307..1365539 1 NC_013895.2 identified by match to protein family HMM PF02388; FemAB family protein 1365539 8811108 HMPREF0868_0450 Clostridiales genomosp. BVAB3 str. UPII9-5 FemAB family protein YP_003474782.1 1364307 D 699246 CDS YP_003474781.1 289450494 8810031 1365587..1366819 1 NC_013895.2 identified by match to protein family HMM PF02388; FemAB family protein 1366819 8810031 HMPREF0868_0449 Clostridiales genomosp. BVAB3 str. UPII9-5 FemAB family protein YP_003474781.1 1365587 D 699246 CDS YP_003474780.1 289449442 8811253 complement(1366857..1368575) 1 NC_013895.2 identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein 1368575 8811253 HMPREF0868_0448 Clostridiales genomosp. BVAB3 str. UPII9-5 von Willebrand factor type A domain-containing protein YP_003474780.1 1366857 R 699246 CDS YP_003474779.1 289450634 8810207 complement(1368914..1370365) 1 NC_013895.2 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF09180; match to protein family HMM TIGR00408; proline--tRNA ligase 1370365 proS 8810207 proS Clostridiales genomosp. BVAB3 str. UPII9-5 proline--tRNA ligase YP_003474779.1 1368914 R 699246 CDS YP_003474778.1 289449614 8810959 complement(1370635..1371738) 1 NC_013895.2 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein 1371738 8810959 HMPREF0868_0446 Clostridiales genomosp. BVAB3 str. UPII9-5 transposase, IS605 OrfB family protein YP_003474778.1 1370635 R 699246 CDS YP_003933654.1 308513255 8810110 complement(1371756..1371965) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1371965 8810110 HMPREF0868_0445 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933654.1 1371756 R 699246 CDS YP_003474777.1 289449518 8810308 complement(1372245..1372709) 1 NC_013895.2 identified by match to protein family HMM PF06695; putative small multi-drug export protein 1372709 8810308 HMPREF0868_0444 Clostridiales genomosp. BVAB3 str. UPII9-5 putative small multi-drug export protein YP_003474777.1 1372245 R 699246 CDS YP_003474776.1 289449711 8810412 1372867..1374054 1 NC_013895.2 identified by match to protein family HMM PF00155; putative aromatic-amino-acid transaminase 1374054 8810412 HMPREF0868_0443 Clostridiales genomosp. BVAB3 str. UPII9-5 putative aromatic-amino-acid transaminase YP_003474776.1 1372867 D 699246 CDS YP_003474775.1 289449813 8811292 complement(1374068..1374196) 1 NC_013895.2 hypothetical protein 1374196 8811292 HMPREF0868_0442 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474775.1 1374068 R 699246 CDS YP_003474774.1 289450670 8811544 1374167..1375054 1 NC_013895.2 identified by match to protein family HMM PF00274; fructose-bisphosphate aldolase class-I 1375054 8811544 HMPREF0868_0441 Clostridiales genomosp. BVAB3 str. UPII9-5 fructose-bisphosphate aldolase class-I YP_003474774.1 1374167 D 699246 CDS YP_003474773.1 289449997 8810573 1375275..1376012 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1376012 8810573 HMPREF0868_0439 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474773.1 1375275 D 699246 CDS YP_003474772.1 289449969 8811460 1376016..1377701 1 NC_013895.2 hypothetical protein 1377701 8811460 HMPREF0868_0438 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474772.1 1376016 D 699246 CDS YP_003474771.1 289450830 8810082 1377797..1378360 1 NC_013895.2 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR03137; peroxiredoxin 1378360 ahpC 8810082 ahpC Clostridiales genomosp. BVAB3 str. UPII9-5 peroxiredoxin YP_003474771.1 1377797 D 699246 CDS YP_003474770.1 289449491 8810986 1378633..1379214 1 NC_013895.2 hypothetical protein 1379214 8810986 HMPREF0868_0436 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474770.1 1378633 D 699246 CDS YP_003474769.1 289450372 8811265 complement(1379279..1380886) 1 NC_013895.2 identified by match to protein family HMM PF07973; threonine/alanine tRNA ligase second additional domain-containing protein 1380886 8811265 HMPREF0868_0435 Clostridiales genomosp. BVAB3 str. UPII9-5 threonine/alanine tRNA ligase second additional domain-containing protein YP_003474769.1 1379279 R 699246 CDS YP_003474768.1 289450645 8810172 complement(1380931..1383411) 1 NC_013895.2 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; putative cadmium, zinc and cobalt-transporting ATPase 1383411 8810172 HMPREF0868_0434 Clostridiales genomosp. BVAB3 str. UPII9-5 putative cadmium, zinc and cobalt-transporting ATPase YP_003474768.1 1380931 R 699246 CDS YP_003474767.1 289449579 8811547 complement(1383550..1383990) 1 NC_013895.2 identified by match to protein family HMM PF01022; transcriptional repressor SmtB family protein 1383990 8811547 HMPREF0868_0433 Clostridiales genomosp. BVAB3 str. UPII9-5 transcriptional repressor SmtB family protein YP_003474767.1 1383550 R 699246 CDS YP_003933655.1 308513256 9829210 1385129..1385491 1 NC_013895.2 hypothetical protein 1385491 9829210 HMPREF0868_1653 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933655.1 1385129 D 699246 CDS YP_003474766.1 289449803 8811483 1385545..1386510 1 NC_013895.2 identified by match to protein family HMM PF00892; hypothetical protein 1386510 8811483 HMPREF0868_0430 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474766.1 1385545 D 699246 CDS YP_003474765.1 289450852 8811366 complement(1386687..1388147) 1 NC_013895.2 identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein 1388147 8811366 HMPREF0868_0429 Clostridiales genomosp. BVAB3 str. UPII9-5 polysaccharide biosynthesis protein YP_003474765.1 1386687 R 699246 CDS YP_003474764.1 289450742 8810836 1388289..1390532 1 NC_013895.2 identified by match to protein family HMM PF02540; match to protein family HMM TIGR00552; NAD+ synthase 1390532 nadE 8810836 nadE Clostridiales genomosp. BVAB3 str. UPII9-5 NAD+ synthase YP_003474764.1 1388289 D 699246 CDS YP_003474763.1 289450228 8810001 complement(1390645..1390875) 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT domain-containing toxin-antitoxin system toxin protein 1390875 8810001 HMPREF0868_0427 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT domain-containing toxin-antitoxin system toxin protein YP_003474763.1 1390645 R 699246 CDS YP_003474762.2 308513257 8811125 complement(1390962..1392206) 1 NC_013895.2 identified by match to protein family HMM PF07690; major facilitator family transporter 1392206 8811125 HMPREF0868_0426 Clostridiales genomosp. BVAB3 str. UPII9-5 major facilitator family transporter YP_003474762.2 1390962 R 699246 CDS YP_003474761.1 289450510 8811165 complement(1392281..1392718) 1 NC_013895.2 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 1392718 8811165 HMPREF0868_0425 Clostridiales genomosp. BVAB3 str. UPII9-5 ArsR family transcriptional regulator YP_003474761.1 1392281 R 699246 CDS YP_003474760.1 289450548 8811062 complement(1392789..1392944) 1 NC_013895.2 hypothetical protein 1392944 8811062 HMPREF0868_0424 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474760.1 1392789 R 699246 CDS YP_003474759.1 289450448 8810504 complement(1393051..1393191) 1 NC_013895.2 hypothetical protein 1393191 8810504 HMPREF0868_0423 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474759.1 1393051 R 699246 CDS YP_003933656.1 308513258 8811437 complement(1393251..1393514) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1393514 8811437 HMPREF0868_0422 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933656.1 1393251 R 699246 CDS YP_003933657.1 308513259 8809942 complement(1393548..1393814) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1393814 8809942 HMPREF0868_0421 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933657.1 1393548 R 699246 CDS YP_003474758.1 289449358 8811426 complement(1393884..1394186) 1 NC_013895.2 hypothetical protein 1394186 8811426 HMPREF0868_0420 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474758.1 1393884 R 699246 CDS YP_003474757.1 289450798 8810190 complement(1394488..1395189) 1 NC_013895.2 identified by match to protein family HMM PF00132; transferase hexapeptide repeat protein 1395189 8810190 HMPREF0868_0419 Clostridiales genomosp. BVAB3 str. UPII9-5 transferase hexapeptide repeat protein YP_003474757.1 1394488 R 699246 CDS YP_003474756.1 289449597 8810893 1395307..1396443 1 NC_013895.2 identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein 1396443 8810893 HMPREF0868_0418 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyltransferase group 2 family protein YP_003474756.1 1395307 D 699246 CDS YP_003474755.1 289450282 8811243 complement(1396451..1397407) 1 NC_013895.2 hypothetical protein 1397407 8811243 HMPREF0868_0417 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474755.1 1396451 R 699246 CDS YP_003474754.1 289450624 8810350 complement(1397557..1399632) 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; putative translation elongation factor G 1399632 8810350 HMPREF0868_0416 Clostridiales genomosp. BVAB3 str. UPII9-5 putative translation elongation factor G YP_003474754.1 1397557 R 699246 CDS YP_003474753.1 289449752 8810475 complement(1399868..1400971) 1 NC_013895.2 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; TIM-barrel protein 1400971 8810475 HMPREF0868_0415 Clostridiales genomosp. BVAB3 str. UPII9-5 TIM-barrel protein YP_003474753.1 1399868 R 699246 CDS YP_003474752.1 289449874 8811331 complement(1401058..1402431) 1 NC_013895.2 hypothetical protein 1402431 8811331 HMPREF0868_0414 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474752.1 1401058 R 699246 CDS YP_003474751.1 289450707 8810103 complement(1402569..1403528) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 1403528 8810103 HMPREF0868_0413 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474751.1 1402569 R 699246 CDS YP_003474750.1 289449511 8810665 complement(1403521..1404534) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 1404534 8810665 HMPREF0868_0412 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474750.1 1403521 R 699246 CDS YP_003474749.1 289450060 8811485 complement(1404550..1405533) 1 NC_013895.2 identified by match to protein family HMM PF00528; putative dipeptide ABC transporter permease DppC 1405533 8811485 HMPREF0868_0411 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dipeptide ABC transporter permease DppC YP_003474749.1 1404550 R 699246 CDS YP_003474748.1 289450854 8810577 complement(1405538..1406473) 1 NC_013895.2 identified by match to protein family HMM PF00528; putative dipeptide ABC transporter permease DppB 1406473 8810577 HMPREF0868_0410 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dipeptide ABC transporter permease DppB YP_003474748.1 1405538 R 699246 CDS YP_003474747.1 289449973 8810877 complement(1406718..1408322) 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 1408322 8810877 HMPREF0868_0409 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003474747.1 1406718 R 699246 CDS YP_003474746.1 289450268 8810200 complement(1408563..1412288) 1 NC_013895.2 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; transcription-repair coupling factor 1412288 mfd 8810200 mfd Clostridiales genomosp. BVAB3 str. UPII9-5 transcription-repair coupling factor YP_003474746.1 1408563 R 699246 CDS YP_003474745.1 289449607 8811089 complement(1412328..1412906) 1 NC_013895.2 identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; aminoacyl-tRNA hydrolase 1412906 pth 8811089 pth Clostridiales genomosp. BVAB3 str. UPII9-5 aminoacyl-tRNA hydrolase YP_003474745.1 1412328 R 699246 CDS YP_003474744.1 289450475 8810402 complement(1412915..1413364) 1 NC_013895.2 identified by match to protein family HMM PF02580; match to protein family HMM TIGR00256; D-tyrosyl-tRNA(Tyr) deacylase 1413364 dtd 8810402 dtd Clostridiales genomosp. BVAB3 str. UPII9-5 D-tyrosyl-tRNA(Tyr) deacylase YP_003474744.1 1412915 R 699246 CDS YP_003474743.1 289449804 8810940 complement(1413428..1413829) 1 NC_013895.2 hypothetical protein 1413829 8810940 HMPREF0868_0405 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474743.1 1413428 R 699246 CDS YP_003474742.1 289450328 8811374 1414070..1415209 1 NC_013895.2 identified by match to protein family HMM PF00710; match to protein family HMM TIGR00519; L-asparaginase 1415209 8811374 HMPREF0868_0404 Clostridiales genomosp. BVAB3 str. UPII9-5 L-asparaginase YP_003474742.1 1414070 D 699246 CDS YP_003474741.1 289450750 8810674 complement(1415348..1416769) 1 NC_013895.2 identified by match to protein family HMM PF00206; putative aspartate ammonia-lyase 1416769 8810674 HMPREF0868_0403 Clostridiales genomosp. BVAB3 str. UPII9-5 putative aspartate ammonia-lyase YP_003474741.1 1415348 R 699246 CDS YP_003474740.1 289450069 8811053 1416976..1417953 1 NC_013895.2 identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; putative 2-dehydropantoate 2-reductase 1417953 8811053 HMPREF0868_0402 Clostridiales genomosp. BVAB3 str. UPII9-5 putative 2-dehydropantoate 2-reductase YP_003474740.1 1416976 D 699246 CDS YP_003474739.1 289450439 8810169 complement(1418171..1419013) 1 NC_013895.2 identified by match to protein family HMM PF02673; undecaprenyl pyrophosphate phosphatase 1419013 8810169 HMPREF0868_0401 Clostridiales genomosp. BVAB3 str. UPII9-5 undecaprenyl pyrophosphate phosphatase YP_003474739.1 1418171 R 699246 CDS YP_003474738.1 289449577 8810909 1419258..1420004 1 NC_013895.2 identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 1420004 8810909 HMPREF0868_0400 Clostridiales genomosp. BVAB3 str. UPII9-5 RelA/SpoT domain-containing protein YP_003474738.1 1419258 D 699246 CDS YP_003474737.1 289450298 8810019 complement(1420040..1420936) 1 NC_013895.2 identified by match to protein family HMM PF00892; hypothetical protein 1420936 8810019 HMPREF0868_0399 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474737.1 1420040 R 699246 CDS YP_003474736.1 289449432 8810358 1421207..1421641 1 NC_013895.2 hypothetical protein 1421641 8810358 HMPREF0868_0398 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474736.1 1421207 D 699246 CDS YP_003474735.1 289449760 8811456 1421769..1422623 1 NC_013895.2 identified by match to protein family HMM PF07751; Abi-like protein 1422623 8811456 HMPREF0868_0397 Clostridiales genomosp. BVAB3 str. UPII9-5 Abi-like protein YP_003474735.1 1421769 D 699246 CDS YP_003474734.1 289450826 8810228 1422841..1423029 1 NC_013895.2 identified by match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain-containing protein 1423029 8810228 HMPREF0868_0396 Clostridiales genomosp. BVAB3 str. UPII9-5 toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain-containing protein YP_003474734.1 1422841 D 699246 CDS YP_003474733.1 289449633 8810793 1423168..1424100 1 NC_013895.2 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase 1424100 pyrB 8810793 pyrB Clostridiales genomosp. BVAB3 str. UPII9-5 aspartate carbamoyltransferase YP_003474733.1 1423168 D 699246 CDS YP_003474732.1 289450186 8811322 1424093..1424518 1 NC_013895.2 identified by match to protein family HMM PF01948; aspartate carbamoyltransferase, regulatory subunit 1424518 pyrI 8811322 pyrI Clostridiales genomosp. BVAB3 str. UPII9-5 aspartate carbamoyltransferase, regulatory subunit YP_003474732.1 1424093 D 699246 CDS YP_003474731.1 289450699 8810581 complement(1424597..1425790) 1 NC_013895.2 hypothetical protein 1425790 8810581 HMPREF0868_0393 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474731.1 1424597 R 699246 CDS YP_003474730.1 289449977 8810381 complement(1425817..1425933) 1 NC_013895.2 hypothetical protein 1425933 8810381 HMPREF0868_0392 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474730.1 1425817 R 699246 CDS YP_003474729.1 289449783 8810165 1426220..1427989 1 NC_013895.2 identified by match to protein family HMM PF00501; AMP-binding enzyme 1427989 8810165 HMPREF0868_0391 Clostridiales genomosp. BVAB3 str. UPII9-5 AMP-binding enzyme YP_003474729.1 1426220 D 699246 CDS YP_003474728.1 289449573 8811282 complement(1428109..1429788) 1 NC_013895.2 identified by match to protein family HMM PF00571; match to protein family HMM PF02833; match to protein family HMM PF07085; putative inorganic diphosphatase PpaC 1429788 8811282 HMPREF0868_0390 Clostridiales genomosp. BVAB3 str. UPII9-5 putative inorganic diphosphatase PpaC YP_003474728.1 1428109 R 699246 CDS YP_003474727.1 289450660 8810379 complement(1429945..1431294) 1 NC_013895.2 hypothetical protein 1431294 8810379 HMPREF0868_0389 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474727.1 1429945 R 699246 CDS YP_003474726.1 289449781 8810866 1431498..1432172 1 NC_013895.2 putative lipoprotein 1432172 8810866 HMPREF0868_0388 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003474726.1 1431498 D 699246 CDS YP_003474725.1 289450257 8810192 complement(1432367..1433878) 1 NC_013895.2 identified by match to protein family HMM PF00939; match to protein family HMM PF03600; sodium:sulfate symporter transmembrane region 1433878 8810192 HMPREF0868_0387 Clostridiales genomosp. BVAB3 str. UPII9-5 sodium:sulfate symporter transmembrane region YP_003474725.1 1432367 R 699246 CDS YP_003474724.1 289449599 8810649 complement(1433921..1434655) 1 NC_013895.2 hypothetical protein 1434655 8810649 HMPREF0868_0386 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474724.1 1433921 R 699246 CDS YP_003474723.1 289450044 8810691 1434682..1436058 1 NC_013895.2 identified by match to protein family HMM PF00206; fumarate hydratase 1436058 fumC 8810691 fumC Clostridiales genomosp. BVAB3 str. UPII9-5 fumarate hydratase YP_003474723.1 1434682 D 699246 CDS YP_003474722.1 289450086 8810687 complement(1436079..1436222) 1 NC_013895.2 hypothetical protein 1436222 8810687 HMPREF0868_0384 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474722.1 1436079 R 699246 CDS YP_003474721.1 289450082 8811174 1436569..1438815 1 NC_013895.2 identified by match to protein family HMM PF00768; serine-type D-Ala-D-Ala carboxypeptidase 1438815 8811174 HMPREF0868_0383 Clostridiales genomosp. BVAB3 str. UPII9-5 serine-type D-Ala-D-Ala carboxypeptidase YP_003474721.1 1436569 D 699246 CDS YP_003474720.1 289450557 8810499 complement(1438920..1439636) 1 NC_013895.2 hypothetical protein 1439636 8810499 HMPREF0868_0382 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474720.1 1438920 R 699246 CDS YP_003474719.1 289449898 8810203 complement(1439647..1440993) 1 NC_013895.2 identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein 1440993 8810203 HMPREF0868_0381 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474719.1 1439647 R 699246 CDS YP_003474718.1 289449610 8810144 complement(1441061..1442464) 1 NC_013895.2 hypothetical protein 1442464 8810144 HMPREF0868_0380 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474718.1 1441061 R 699246 CDS YP_003474717.1 289449552 8810447 complement(1442551..1443396) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1443396 8810447 HMPREF0868_0379 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474717.1 1442551 R 699246 CDS YP_003474716.1 289449846 8811159 complement(1443482..1444672) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1444672 8811159 HMPREF0868_0378 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474716.1 1443482 R 699246 CDS YP_003474715.1 289450542 8810596 complement(1444781..1445800) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1445800 8810596 HMPREF0868_0377 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474715.1 1444781 R 699246 CDS YP_003474714.1 289449992 8810550 complement(1445918..1446763) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1446763 8810550 HMPREF0868_0376 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474714.1 1445918 R 699246 CDS YP_003474713.1 289449946 8809994 1446985..1447716 1 NC_013895.2 identified by match to protein family HMM PF02308; Mg2+ transporter-C family protein 1447716 8809994 HMPREF0868_0375 Clostridiales genomosp. BVAB3 str. UPII9-5 Mg2+ transporter-C family protein YP_003474713.1 1446985 D 699246 CDS YP_003474712.1 289449408 8811368 1447794..1448672 1 NC_013895.2 identified by match to protein family HMM PF02308; Mg2+ transporter-C family protein 1448672 8811368 HMPREF0868_0374 Clostridiales genomosp. BVAB3 str. UPII9-5 Mg2+ transporter-C family protein YP_003474712.1 1447794 D 699246 CDS YP_003474711.1 289450744 8810921 complement(1448695..1449135) 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1449135 8810921 HMPREF0868_0373 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003474711.1 1448695 R 699246 CDS YP_003474710.1 289450310 8810506 complement(1449126..1450034) 1 NC_013895.2 hypothetical protein 1450034 8810506 HMPREF0868_0372 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474710.1 1449126 R 699246 CDS YP_003474709.1 289449904 8810526 1450352..1451251 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 1451251 sufC 8810526 sufC Clostridiales genomosp. BVAB3 str. UPII9-5 FeS assembly ATPase SufC YP_003474709.1 1450352 D 699246 CDS YP_003474708.1 289449923 8811008 1451266..1452420 1 NC_013895.2 identified by match to protein family HMM PF01458; SufB/sufD domain-containing protein 1452420 8811008 HMPREF0868_0370 Clostridiales genomosp. BVAB3 str. UPII9-5 SufB/sufD domain-containing protein YP_003474708.1 1451266 D 699246 CDS YP_003474707.1 289450394 8810335 1452420..1453706 1 NC_013895.2 identified by match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM TIGR01979; putative bifunctional cysteine desulfurase/selenocysteine lyase 1453706 8810335 HMPREF0868_0369 Clostridiales genomosp. BVAB3 str. UPII9-5 putative bifunctional cysteine desulfurase/selenocysteine lyase YP_003474707.1 1452420 D 699246 CDS YP_003474706.1 289449737 8810819 1453690..1454196 1 NC_013895.2 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; NifU family SUF system FeS assembly protein 1454196 8810819 HMPREF0868_0368 Clostridiales genomosp. BVAB3 str. UPII9-5 NifU family SUF system FeS assembly protein YP_003474706.1 1453690 D 699246 CDS YP_003474705.1 289450211 8810764 1454266..1455717 1 NC_013895.2 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 1455717 sufB 8810764 sufB Clostridiales genomosp. BVAB3 str. UPII9-5 FeS assembly protein SufB YP_003474705.1 1454266 D 699246 CDS YP_003474704.1 289450157 8811004 complement(1455823..1455945) 1 NC_013895.2 hypothetical protein 1455945 8811004 HMPREF0868_0366 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474704.1 1455823 R 699246 CDS YP_003474703.1 289450390 8810916 complement(1455988..1457187) 1 NC_013895.2 hypothetical protein 1457187 8810916 HMPREF0868_0365 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474703.1 1455988 R 699246 CDS YP_003474702.1 289450305 8809948 complement(1457172..1458926) 1 NC_013895.2 identified by match to protein family HMM PF01432; match to protein family HMM PF08439; PepF/M3 family oligoendopeptidase 1458926 8809948 HMPREF0868_0364 Clostridiales genomosp. BVAB3 str. UPII9-5 PepF/M3 family oligoendopeptidase YP_003474702.1 1457172 R 699246 CDS YP_003474701.2 308513260 8811509 complement(1459041..1460396) 1 NC_013895.2 hypothetical protein 1460396 8811509 HMPREF0868_0363 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474701.2 1459041 R 699246 CDS YP_003474700.1 289450875 8810003 complement(1460516..1461886) 1 NC_013895.2 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein 1461886 agcS 8810003 agcS Clostridiales genomosp. BVAB3 str. UPII9-5 amino acid carrier protein YP_003474700.1 1460516 R 699246 CDS YP_003474699.1 289449416 8811257 complement(1461995..1462927) 1 NC_013895.2 identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; carbamate kinase 1462927 arcC 8811257 arcC Clostridiales genomosp. BVAB3 str. UPII9-5 carbamate kinase YP_003474699.1 1461995 R 699246 CDS YP_003474698.1 289450638 8810600 complement(1462989..1463981) 1 NC_013895.2 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase 1463981 argF 8810600 argF Clostridiales genomosp. BVAB3 str. UPII9-5 ornithine carbamoyltransferase YP_003474698.1 1462989 R 699246 CDS YP_003474696.1 289449642 8810357 1464292..1465887 1 NC_013895.2 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1465887 8810357 HMPREF0868_0358 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003474696.1 1464292 D 699246 CDS YP_003474695.1 289449759 8811124 1465950..1467080 1 NC_013895.2 hypothetical protein 1467080 8811124 HMPREF0868_0357 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474695.1 1465950 D 699246 CDS YP_003474694.1 289450509 8810938 complement(1468004..1471309) 1 NC_013895.2 hypothetical protein 1471309 8810938 HMPREF0868_0356 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474694.1 1468004 R 699246 CDS YP_003474693.1 289450326 8810116 1471561..1473390 1 NC_013895.2 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; putative phosphoglucomutase 1473390 8810116 HMPREF0868_0355 Clostridiales genomosp. BVAB3 str. UPII9-5 putative phosphoglucomutase YP_003474693.1 1471561 D 699246 CDS YP_003474692.1 289449524 8811175 complement(1473617..1474297) 1 NC_013895.2 hypothetical protein 1474297 8811175 HMPREF0868_0354 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474692.1 1473617 R 699246 CDS YP_003474691.1 289450558 8810290 complement(1474317..1475432) 1 NC_013895.2 identified by match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-ala D-ala ligase N-terminal domain-containing protein 1475432 8810290 HMPREF0868_0353 Clostridiales genomosp. BVAB3 str. UPII9-5 D-ala D-ala ligase N-terminal domain-containing protein YP_003474691.1 1474317 R 699246 CDS YP_003474690.1 289449694 8810576 complement(1475447..1475905) 1 NC_013895.2 hypothetical protein 1475905 8810576 HMPREF0868_0352 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474690.1 1475447 R 699246 CDS YP_003474689.1 289449972 8811270 complement(1475898..1476419) 1 NC_013895.2 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 1476419 coaD 8811270 coaD Clostridiales genomosp. BVAB3 str. UPII9-5 pantetheine-phosphate adenylyltransferase YP_003474689.1 1475898 R 699246 CDS YP_003474688.1 289450650 8810821 complement(1476429..1477001) 1 NC_013895.2 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; RsmD family RNA methyltransferase 1477001 8810821 HMPREF0868_0350 Clostridiales genomosp. BVAB3 str. UPII9-5 RsmD family RNA methyltransferase YP_003474688.1 1476429 R 699246 CDS YP_003474687.1 289450213 8811477 complement(1477003..1479159) 1 NC_013895.2 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG 1479159 recG 8811477 recG Clostridiales genomosp. BVAB3 str. UPII9-5 ATP-dependent DNA helicase RecG YP_003474687.1 1477003 R 699246 CDS YP_003474686.1 289450846 8810397 complement(1479185..1479931) 1 NC_013895.2 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 1479931 nth 8810397 nth Clostridiales genomosp. BVAB3 str. UPII9-5 endonuclease III YP_003474686.1 1479185 R 699246 CDS YP_003474685.1 289449799 8811086 complement(1479960..1481726) 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 1481726 8811086 HMPREF0868_0347 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003474685.1 1479960 R 699246 CDS YP_003474684.1 289450472 8810252 complement(1481801..1482520) 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1482520 8810252 HMPREF0868_0346 Clostridiales genomosp. BVAB3 str. UPII9-5 putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP YP_003474684.1 1481801 R 699246 CDS YP_003474683.1 289449656 8810912 complement(1482781..1483248) 1 NC_013895.2 identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR 1483248 nrdR 8810912 nrdR Clostridiales genomosp. BVAB3 str. UPII9-5 transcriptional regulator NrdR YP_003474683.1 1482781 R 699246 CDS YP_003474682.1 289450301 8811487 complement(1483308..1484759) 1 NC_013895.2 identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 1484759 ftsZ 8811487 ftsZ Clostridiales genomosp. BVAB3 str. UPII9-5 cell division protein FtsZ YP_003474682.1 1483308 R 699246 CDS YP_003474680.1 289450006 8810570 complement(1485021..1487129) 1 NC_013895.2 identified by match to protein family HMM PF08478; POTRA domain-containing protein, FtsQ-type 1487129 8810570 HMPREF0868_0343 Clostridiales genomosp. BVAB3 str. UPII9-5 POTRA domain-containing protein, FtsQ-type YP_003474680.1 1485021 R 699246 CDS YP_003474679.1 289449966 8811445 complement(1487136..1488314) 1 NC_013895.2 identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1488314 murG 8811445 murG Clostridiales genomosp. BVAB3 str. UPII9-5 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_003474679.1 1487136 R 699246 CDS YP_003474678.1 289450815 8810363 complement(1488323..1489591) 1 NC_013895.2 identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family 1489591 8810363 HMPREF0868_0340 Clostridiales genomosp. BVAB3 str. UPII9-5 cell cycle protein, FtsW/RodA/SpoVE family YP_003474678.1 1488323 R 699246 CDS YP_003474677.1 289449765 8811312 complement(1489608..1490612) 1 NC_013895.2 identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 1490612 mraY 8811312 mraY Clostridiales genomosp. BVAB3 str. UPII9-5 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003474677.1 1489608 R 699246 CDS YP_003474676.1 289450690 8810315 complement(1490744..1492405) 1 NC_013895.2 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1492405 murF 8810315 murF Clostridiales genomosp. BVAB3 str. UPII9-5 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_003474676.1 1490744 R 699246 CDS YP_003474675.1 289449718 8811427 complement(1492518..1495361) 1 NC_013895.2 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; penicillin-binding protein 1495361 8811427 HMPREF0868_0337 Clostridiales genomosp. BVAB3 str. UPII9-5 penicillin-binding protein YP_003474675.1 1492518 R 699246 CDS YP_003474674.1 289450799 8810322 complement(1495351..1496001) 1 NC_013895.2 hypothetical protein 1496001 8810322 HMPREF0868_0336 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474674.1 1495351 R 699246 CDS YP_003474673.1 289449724 8811241 complement(1496083..1497171) 1 NC_013895.2 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1497171 mraW 8811241 mraW Clostridiales genomosp. BVAB3 str. UPII9-5 S-adenosyl-methyltransferase MraW YP_003474673.1 1496083 R 699246 CDS YP_003474672.1 289450623 8810088 complement(1497267..1504622) 1 NC_013895.2 hypothetical protein 1504622 8810088 HMPREF0868_0334 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474672.1 1497267 R 699246 CDS YP_003474671.1 289449497 8811037 1504935..1506785 1 NC_013895.2 identified by match to protein family HMM TIGR00229; PAS domain S-box protein 1506785 8811037 HMPREF0868_0333 Clostridiales genomosp. BVAB3 str. UPII9-5 PAS domain S-box protein YP_003474671.1 1504935 D 699246 CDS YP_003474670.1 289450423 8810050 1506945..1507220 1 NC_013895.2 hypothetical protein 1507220 8810050 HMPREF0868_0332 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474670.1 1506945 D 699246 CDS YP_003474669.1 289449460 8810761 complement(1507323..1510088) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt transport protein 1510088 8810761 HMPREF0868_0331 Clostridiales genomosp. BVAB3 str. UPII9-5 cobalt transport protein YP_003474669.1 1507323 R 699246 CDS YP_003474668.1 289450154 8810339 complement(1510168..1510878) 1 NC_013895.2 membrane family protein 1510878 8810339 HMPREF0868_0330 Clostridiales genomosp. BVAB3 str. UPII9-5 membrane family protein YP_003474668.1 1510168 R 699246 CDS YP_003474667.1 289449741 8811238 complement(1511277..1513292) 1 NC_013895.2 hypothetical protein 1513292 8811238 HMPREF0868_0329 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474667.1 1511277 R 699246 CDS YP_003474666.1 289450621 8810133 complement(1513382..1513582) 1 NC_013895.2 hypothetical protein 1513582 8810133 HMPREF0868_0328 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474666.1 1513382 R 699246 CDS YP_003474665.1 289449541 8810768 1513609..1513749 1 NC_013895.2 hypothetical protein 1513749 8810768 HMPREF0868_0327 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474665.1 1513609 D 699246 CDS YP_003474664.1 289450161 8810058 complement(1513944..1514075) 1 NC_013895.2 hypothetical protein 1514075 8810058 HMPREF0868_0326 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474664.1 1513944 R 699246 CDS YP_003474663.1 289449467 8811372 1514029..1516791 1 NC_013895.2 identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-importing ATPase 1516791 mgtA 8811372 mgtA Clostridiales genomosp. BVAB3 str. UPII9-5 magnesium-importing ATPase YP_003474663.1 1514029 D 699246 CDS YP_003474662.1 289450748 8810492 1517123..1517350 1 NC_013895.2 hypothetical protein 1517350 8810492 HMPREF0868_0323 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474662.1 1517123 D 699246 CDS YP_003474661.1 289449891 8810304 complement(1517301..1518485) 1 NC_013895.2 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; putative thermostable carboxypeptidase 1 1518485 8810304 HMPREF0868_0324 Clostridiales genomosp. BVAB3 str. UPII9-5 putative thermostable carboxypeptidase 1 YP_003474661.1 1517301 R 699246 CDS YP_003474660.1 289449707 8811188 complement(1518500..1519336) 1 NC_013895.2 hypothetical protein 1519336 8811188 HMPREF0868_0322 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474660.1 1518500 R 699246 CDS YP_003474659.1 289450571 8810436 complement(1519532..1523542) 1 NC_013895.2 identified by match to protein family HMM PF02018; carbohydrate binding domain-containing protein 1523542 8810436 HMPREF0868_0321 Clostridiales genomosp. BVAB3 str. UPII9-5 carbohydrate binding domain-containing protein YP_003474659.1 1519532 R 699246 CDS YP_003474658.1 289449836 8811166 complement(1523564..1524934) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1524934 8811166 HMPREF0868_0320 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474658.1 1523564 R 699246 CDS YP_003474657.1 289450549 8811481 complement(1525138..1526109) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1526109 8811481 HMPREF0868_0319 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474657.1 1525138 R 699246 CDS YP_003474656.1 289450850 8810546 complement(1526114..1527088) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1527088 8810546 HMPREF0868_0318 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474656.1 1526114 R 699246 CDS YP_003474655.1 289449942 8811451 complement(1527091..1529352) 1 NC_013895.2 putative lipoprotein 1529352 8811451 HMPREF0868_0317 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003474655.1 1527091 R 699246 CDS YP_003474654.1 289450821 8810530 complement(1529355..1531406) 1 NC_013895.2 hypothetical protein 1531406 8810530 HMPREF0868_0316 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474654.1 1529355 R 699246 CDS YP_003474653.1 289449927 8811185 complement(1531411..1532283) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1532283 8811185 HMPREF0868_0315 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474653.1 1531411 R 699246 CDS YP_003474652.1 289450568 8811112 complement(1532285..1533181) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1533181 8811112 HMPREF0868_0314 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474652.1 1532285 R 699246 CDS YP_003474651.1 289450497 8810215 complement(1533178..1535997) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1535997 8810215 HMPREF0868_0313 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474651.1 1533178 R 699246 CDS YP_003474650.1 289449622 8811069 complement(1536042..1538357) 1 NC_013895.2 identified by match to protein family HMM PF00933; match to protein family HMM PF01915; overlaps another CDS with the same product name; glycosyl hydrolase family 3 protein 1538357 8811069 HMPREF0868_0312 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyl hydrolase family 3 protein YP_003474650.1 1536042 R 699246 CDS YP_003474649.1 289450455 8810704 complement(1538347..1540554) 1 NC_013895.2 identified by match to protein family HMM PF00933; match to protein family HMM PF01915; overlaps another CDS with the same product name; glycosyl hydrolase family 3 protein 1540554 8810704 HMPREF0868_0311 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyl hydrolase family 3 protein YP_003474649.1 1538347 R 699246 CDS YP_003474648.1 289450099 8810870 complement(1540566..1542455) 1 NC_013895.2 hypothetical protein 1542455 8810870 HMPREF0868_0310 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474648.1 1540566 R 699246 CDS YP_003474647.1 289450261 8811137 complement(1542773..1543642) 1 NC_013895.2 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883; AraC family transcriptional regulator 1543642 8811137 HMPREF0868_0309 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003474647.1 1542773 R 699246 CDS YP_003474646.1 289450521 8811345 complement(1543859..1544638) 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00165; response regulator receiver domain-containing protein 1544638 8811345 HMPREF0868_0308 Clostridiales genomosp. BVAB3 str. UPII9-5 response regulator receiver domain-containing protein YP_003474646.1 1543859 R 699246 CDS YP_003474645.1 289450721 8811360 complement(1544676..1546787) 1 NC_013895.2 identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF06580; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 1546787 8811360 HMPREF0868_0307 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003474645.1 1544676 R 699246 CDS YP_003474644.1 289450736 8810632 1546945..1547124 1 NC_013895.2 hypothetical protein 1547124 8810632 HMPREF0868_0306 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474644.1 1546945 D 699246 CDS YP_003474643.1 289450028 8811298 1547229..1547627 1 NC_013895.2 hypothetical protein 1547627 8811298 HMPREF0868_0305 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474643.1 1547229 D 699246 CDS YP_003474642.1 289450676 8811018 1547709..1548482 1 NC_013895.2 hypothetical protein 1548482 8811018 HMPREF0868_0304 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474642.1 1547709 D 699246 CDS YP_003474641.1 289450404 8811099 1548487..1549272 1 NC_013895.2 hypothetical protein 1549272 8811099 HMPREF0868_0303 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474641.1 1548487 D 699246 CDS YP_003474640.1 289450485 8809988 1549276..1549914 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1549914 8809988 HMPREF0868_0302 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474640.1 1549276 D 699246 CDS YP_003474639.1 289449402 8811335 complement(1550200..1551864) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1551864 8811335 HMPREF0868_0301 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474639.1 1550200 R 699246 CDS YP_003474638.1 289450711 8810653 complement(1551851..1552990) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter ATP-binding protein 1552990 8810653 HMPREF0868_0300 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474638.1 1551851 R 699246 CDS YP_003474637.1 289450048 8810663 complement(1553111..1554217) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1554217 8810663 HMPREF0868_0299 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474637.1 1553111 R 699246 CDS YP_003474636.1 289450058 8810480 complement(1554479..1557955) 1 NC_013895.2 identified by match to protein family HMM PF05738; LPXTG-motif cell wall anchor domain-containing protein 1557955 8810480 HMPREF0868_0298 Clostridiales genomosp. BVAB3 str. UPII9-5 LPXTG-motif cell wall anchor domain-containing protein YP_003474636.1 1554479 R 699246 CDS YP_003474635.1 289449879 8810464 complement(1558142..1558255) 1 NC_013895.2 hypothetical protein 1558255 8810464 HMPREF0868_0297 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474635.1 1558142 R 699246 CDS YP_003474634.1 289449863 8811357 complement(1558374..1559966) 1 NC_013895.2 identified by match to protein family HMM PF00746; match to protein family HMM PF09479; match to protein family HMM TIGR01167; match to protein family HMM TIGR02543; hypothetical protein 1559966 8811357 HMPREF0868_0296 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474634.1 1558374 R 699246 CDS YP_003474633.1 289450733 8810679 complement(1560307..1561404) 1 NC_013895.2 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein 1561404 8810679 HMPREF0868_0295 Clostridiales genomosp. BVAB3 str. UPII9-5 transposase, IS605 OrfB family protein YP_003474633.1 1560307 R 699246 CDS YP_003474632.1 289450074 8810042 complement(1561550..1562725) 1 NC_013895.2 putative lipoprotein 1562725 8810042 HMPREF0868_0294 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003474632.1 1561550 R 699246 CDS YP_003474631.1 289449452 8810108 complement(1562838..1563521) 1 NC_013895.2 hypothetical protein 1563521 8810108 HMPREF0868_0293 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474631.1 1562838 R 699246 CDS YP_003474630.1 289449516 8810992 1563977..1565287 1 NC_013895.2 identified by match to protein family HMM PF02388; FemAB family protein 1565287 8810992 HMPREF0868_0292 Clostridiales genomosp. BVAB3 str. UPII9-5 FemAB family protein YP_003474630.1 1563977 D 699246 CDS YP_003474629.1 289450378 8810249 1565304..1566545 1 NC_013895.2 hypothetical protein 1566545 8810249 HMPREF0868_0291 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474629.1 1565304 D 699246 CDS YP_003474628.1 289449653 8811184 complement(1566614..1568740) 1 NC_013895.2 identified by match to protein family HMM PF09479; hypothetical protein 1568740 8811184 HMPREF0868_0290 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474628.1 1566614 R 699246 CDS YP_003474627.1 289450567 8811180 complement(1568776..1569516) 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00165; response regulator receiver domain-containing protein 1569516 8811180 HMPREF0868_0289 Clostridiales genomosp. BVAB3 str. UPII9-5 response regulator receiver domain-containing protein YP_003474627.1 1568776 R 699246 CDS YP_003474626.1 289450563 8810196 complement(1569574..1571571) 1 NC_013895.2 identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF06580; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 1571571 8810196 HMPREF0868_0288 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003474626.1 1569574 R 699246 CDS YP_003474625.1 289449603 8810571 complement(1571568..1572599) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1572599 8810571 HMPREF0868_0287 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474625.1 1571568 R 699246 CDS YP_003474624.1 289449967 8810012 complement(1572718..1574361) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter ATP-binding protein 1574361 8810012 HMPREF0868_0286 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474624.1 1572718 R 699246 CDS YP_003474623.1 289449425 8810360 complement(1574366..1576189) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1576189 8810360 HMPREF0868_0285 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474623.1 1574366 R 699246 CDS YP_003474622.1 289449762 8811398 complement(1576361..1577731) 1 NC_013895.2 putative lipoprotein 1577731 8811398 HMPREF0868_0284 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein YP_003474622.1 1576361 R 699246 CDS YP_003474621.1 289450773 8810142 complement(1578050..1581532) 1 NC_013895.2 hypothetical protein 1581532 8810142 HMPREF0868_0283 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474621.1 1578050 R 699246 CDS YP_003474620.1 289449550 8811192 1581734..1582336 1 NC_013895.2 identified by match to protein family HMM PF08876; hypothetical protein 1582336 8811192 HMPREF0868_0282 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474620.1 1581734 D 699246 CDS YP_003474619.1 289450575 8810869 1582333..1584294 1 NC_013895.2 identified by match to protein family HMM PF00501; AMP-binding enzyme 1584294 8810869 HMPREF0868_0281 Clostridiales genomosp. BVAB3 str. UPII9-5 AMP-binding enzyme YP_003474619.1 1582333 D 699246 CDS YP_003474618.1 289450260 8810150 1584652..1585461 1 NC_013895.2 identified by match to protein family HMM PF01978; sugar-specific transcriptional regulator, TrmB family 1585461 8810150 HMPREF0868_0280 Clostridiales genomosp. BVAB3 str. UPII9-5 sugar-specific transcriptional regulator, TrmB family YP_003474618.1 1584652 D 699246 CDS YP_003474617.1 289449558 8811367 1585475..1586362 1 NC_013895.2 hypothetical protein 1586362 8811367 HMPREF0868_0279 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474617.1 1585475 D 699246 CDS YP_003474616.1 289450743 8810487 1586359..1587357 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02423; ornithine cyclodeaminase 1587357 8810487 HMPREF0868_0278 Clostridiales genomosp. BVAB3 str. UPII9-5 ornithine cyclodeaminase YP_003474616.1 1586359 D 699246 CDS YP_003474615.1 289449886 8811200 complement(1587546..1589006) 1 NC_013895.2 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312; xylulokinase 1589006 xylB 8811200 xylB Clostridiales genomosp. BVAB3 str. UPII9-5 xylulokinase YP_003474615.1 1587546 R 699246 CDS YP_003474614.1 289450583 8811003 complement(1589122..1590444) 1 NC_013895.2 identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; xylose isomerase 1590444 xylA 8811003 xylA Clostridiales genomosp. BVAB3 str. UPII9-5 xylose isomerase YP_003474614.1 1589122 R 699246 CDS YP_003474613.1 289450389 8810291 complement(1590479..1591927) 1 NC_013895.2 identified by match to protein family HMM PF03553; match to protein family HMM TIGR00931; Na+/H+ antiporter NhaC 1591927 nhaC_2 8810291 nhaC_2 Clostridiales genomosp. BVAB3 str. UPII9-5 Na+/H+ antiporter NhaC YP_003474613.1 1590479 R 699246 CDS YP_003474612.1 289449695 8810951 complement(1591924..1593087) 1 NC_013895.2 identified by match to protein family HMM PF00155; class I/II aminotransferase 1593087 8810951 HMPREF0868_0274 Clostridiales genomosp. BVAB3 str. UPII9-5 class I/II aminotransferase YP_003474612.1 1591924 R 699246 CDS YP_003474611.1 289450339 8810091 complement(1593119..1594090) 1 NC_013895.2 identified by match to protein family HMM PF01263; aldose 1-epimerase 1594090 8810091 HMPREF0868_0273 Clostridiales genomosp. BVAB3 str. UPII9-5 aldose 1-epimerase YP_003474611.1 1593119 R 699246 CDS YP_003474610.1 289449500 8810281 complement(1594389..1595543) 1 NC_013895.2 identified by match to protein family HMM PF00480; ROK family protein 1595543 8810281 HMPREF0868_0272 Clostridiales genomosp. BVAB3 str. UPII9-5 ROK family protein YP_003474610.1 1594389 R 699246 CDS YP_003474609.1 289449685 8810937 complement(1595563..1595709) 1 NC_013895.2 hypothetical protein 1595709 8810937 HMPREF0868_0271 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474609.1 1595563 R 699246 CDS YP_003474608.1 289450325 8811394 1595824..1596570 1 NC_013895.2 identified by match to protein family HMM PF01048; putative purine nucleoside phosphorylase 1596570 8811394 HMPREF0868_0270 Clostridiales genomosp. BVAB3 str. UPII9-5 putative purine nucleoside phosphorylase YP_003474608.1 1595824 D 699246 CDS YP_003474607.1 289450769 8810234 complement(1596639..1597571) 1 NC_013895.2 identified by match to protein family HMM PF01156; putative cytidine/uridine-specific hydrolase 1597571 8810234 HMPREF0868_0269 Clostridiales genomosp. BVAB3 str. UPII9-5 putative cytidine/uridine-specific hydrolase YP_003474607.1 1596639 R 699246 CDS YP_003474606.1 289449638 8809978 complement(1597702..1598688) 1 NC_013895.2 identified by match to protein family HMM PF01156; putative cytidine/uridine-specific hydrolase 1598688 8809978 HMPREF0868_0268 Clostridiales genomosp. BVAB3 str. UPII9-5 putative cytidine/uridine-specific hydrolase YP_003474606.1 1597702 R 699246 CDS YP_003474605.1 289449392 8810964 complement(1598700..1599701) 1 NC_013895.2 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 1599701 8810964 HMPREF0868_0267 Clostridiales genomosp. BVAB3 str. UPII9-5 branched-chain amino acid ABC transporter permease YP_003474605.1 1598700 R 699246 CDS YP_003474604.1 289450350 8811414 complement(1599703..1600890) 1 NC_013895.2 identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 1600890 8811414 HMPREF0868_0266 Clostridiales genomosp. BVAB3 str. UPII9-5 branched-chain amino acid ABC transporter permease YP_003474604.1 1599703 R 699246 CDS YP_003474603.1 289450787 8810640 complement(1600883..1602439) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1602439 8810640 HMPREF0868_0265 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474603.1 1600883 R 699246 CDS YP_003474602.1 289450036 8810657 complement(1602510..1603691) 1 NC_013895.2 identified by match to protein family HMM PF02608; basic membrane protein 1603691 8810657 HMPREF0868_0264 Clostridiales genomosp. BVAB3 str. UPII9-5 basic membrane protein YP_003474602.1 1602510 R 699246 CDS YP_003474601.1 289450052 8811392 complement(1603743..1604747) 1 NC_013895.2 identified by match to protein family HMM PF00294; putative ribokinase 1604747 8811392 HMPREF0868_0263 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ribokinase YP_003474601.1 1603743 R 699246 CDS YP_003474600.1 289450767 8810461 complement(1604961..1606754) 1 NC_013895.2 identified by match to protein family HMM PF06100; hypothetical protein 1606754 8810461 HMPREF0868_0262 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474600.1 1604961 R 699246 CDS YP_003474599.1 289449860 8811115 complement(1606867..1607457) 1 NC_013895.2 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1607457 8811115 HMPREF0868_0261 Clostridiales genomosp. BVAB3 str. UPII9-5 TetR family transcriptional regulator YP_003474599.1 1606867 R 699246 CDS YP_003474598.1 289450500 8811035 complement(1607597..1608043) 1 NC_013895.2 hypothetical protein 1608043 8811035 HMPREF0868_0260 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474598.1 1607597 R 699246 CDS YP_003474597.1 289450421 8810977 complement(1608044..1608259) 1 NC_013895.2 identified by match to protein family HMM PF01381; Xre family toxin-antitoxin system antitoxin protein 1608259 8810977 HMPREF0868_0259 Clostridiales genomosp. BVAB3 str. UPII9-5 Xre family toxin-antitoxin system antitoxin protein YP_003474597.1 1608044 R 699246 CDS YP_003474596.1 289450363 8810081 complement(1609139..1610974) 1 NC_013895.2 identified by match to protein family HMM PF09479; hypothetical protein 1610974 8810081 HMPREF0868_0258 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474596.1 1609139 R 699246 CDS YP_003474595.1 289449490 8810831 1611424..1611651 1 NC_013895.2 hypothetical protein 1611651 8810831 HMPREF0868_0257 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474595.1 1611424 D 699246 CDS YP_003474594.1 289450223 8810928 complement(1612109..1612540) 1 NC_013895.2 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein 1612540 8810928 HMPREF0868_0256 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474594.1 1612109 R 699246 CDS YP_003474593.1 289450316 8810334 complement(1612563..1613690) 1 NC_013895.2 identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 1613690 lgt 8810334 lgt Clostridiales genomosp. BVAB3 str. UPII9-5 prolipoprotein diacylglyceryl transferase YP_003474593.1 1612563 R 699246 CDS YP_003474592.1 289449736 8810396 complement(1613698..1615092) 1 NC_013895.2 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase M16 inactive domain-containing protein 1615092 8810396 HMPREF0868_0254 Clostridiales genomosp. BVAB3 str. UPII9-5 peptidase M16 inactive domain-containing protein YP_003474592.1 1613698 R 699246 CDS YP_003474591.1 289449798 8811293 complement(1615074..1617437) 1 NC_013895.2 identified by match to protein family HMM PF01687; match to protein family HMM PF05193; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 1617437 ribF 8811293 ribF Clostridiales genomosp. BVAB3 str. UPII9-5 riboflavin biosynthesis protein RibF YP_003474591.1 1615074 R 699246 CDS YP_003474590.1 289450671 8811252 complement(1617418..1618560) 1 NC_013895.2 identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B 1618560 truB 8811252 truB Clostridiales genomosp. BVAB3 str. UPII9-5 tRNA pseudouridine synthase B YP_003474590.1 1617418 R 699246 CDS YP_003474589.2 308513261 8810545 complement(1618645..1619685) 1 NC_013895.2 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHHA1 domain-containing protein 1619685 8810545 HMPREF0868_0251 Clostridiales genomosp. BVAB3 str. UPII9-5 DHHA1 domain-containing protein YP_003474589.2 1618645 R 699246 CDS YP_003474588.1 289449941 8810787 complement(1619678..1620091) 1 NC_013895.2 identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 1620091 rbfA 8810787 rbfA Clostridiales genomosp. BVAB3 str. UPII9-5 ribosome-binding factor A YP_003474588.1 1619678 R 699246 CDS YP_003474587.1 289450180 8811034 complement(1620093..1623560) 1 NC_013895.2 identified by match to protein family HMM PF00009; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 1623560 infB 8811034 infB Clostridiales genomosp. BVAB3 str. UPII9-5 translation initiation factor IF-2 YP_003474587.1 1620093 R 699246 CDS YP_003474586.1 289450420 8810868 complement(1623812..1624516) 1 NC_013895.2 identified by match to protein family HMM PF01248; match to protein family HMM PF04296; hypothetical protein 1624516 8810868 HMPREF0868_0248 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474586.1 1623812 R 699246 CDS YP_003474585.1 289450259 8810597 complement(1624500..1625618) 1 NC_013895.2 identified by match to protein family HMM PF08529; match to protein family HMM TIGR01953; transcription termination factor NusA 1625618 nusA 8810597 nusA Clostridiales genomosp. BVAB3 str. UPII9-5 transcription termination factor NusA YP_003474585.1 1624500 R 699246 CDS YP_003474584.1 289449993 8810380 complement(1625675..1626142) 1 NC_013895.2 identified by match to protein family HMM PF02576; hypothetical protein 1626142 8810380 HMPREF0868_0246 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474584.1 1625675 R 699246 CDS YP_003474583.1 289449782 8811120 1626585..1626869 1 NC_013895.2 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 1626869 8811120 HMPREF0868_0245 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein YP_003474583.1 1626585 D 699246 CDS YP_003474582.1 289450505 8811255 1627188..1627598 1 NC_013895.2 hypothetical protein 1627598 8811255 HMPREF0868_0244 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474582.1 1627188 D 699246 CDS YP_003474581.1 289450636 8810749 complement(1627813..1629375) 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 1629375 8810749 HMPREF0868_0243 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003474581.1 1627813 R 699246 CDS YP_003474580.1 289450144 8810007 complement(1629393..1630052) 1 NC_013895.2 identified by match to protein family HMM PF00005; putative lipoprotein releasing system, ATP-binding protein 1630052 8810007 HMPREF0868_0242 Clostridiales genomosp. BVAB3 str. UPII9-5 putative lipoprotein releasing system, ATP-binding protein YP_003474580.1 1629393 R 699246 CDS YP_003474579.1 289449420 8810054 complement(1630052..1631257) 1 NC_013895.2 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1631257 8810054 HMPREF0868_0241 Clostridiales genomosp. BVAB3 str. UPII9-5 efflux ABC transporter permease YP_003474579.1 1630052 R 699246 CDS YP_003474578.1 289449463 8810660 complement(1631365..1631817) 1 NC_013895.2 hypothetical protein 1631817 8810660 HMPREF0868_0240 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474578.1 1631365 R 699246 CDS YP_003474577.1 289450055 8810955 complement(1631930..1632361) 1 NC_013895.2 identified by match to protein family HMM PF04205; FMN-binding domain-containing protein 1632361 8810955 HMPREF0868_0239 Clostridiales genomosp. BVAB3 str. UPII9-5 FMN-binding domain-containing protein YP_003474577.1 1631930 R 699246 CDS YP_003474576.1 289450343 8810474 complement(1632771..1633505) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1633505 8810474 HMPREF0868_0238 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474576.1 1632771 R 699246 CDS YP_003474575.1 289449873 8810254 complement(1633588..1634790) 1 NC_013895.2 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1634790 8810254 HMPREF0868_0237 Clostridiales genomosp. BVAB3 str. UPII9-5 efflux ABC transporter permease YP_003474575.1 1633588 R 699246 CDS YP_003474574.1 289449658 8811016 complement(1634797..1636080) 1 NC_013895.2 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1636080 8811016 HMPREF0868_0236 Clostridiales genomosp. BVAB3 str. UPII9-5 efflux ABC transporter permease YP_003474574.1 1634797 R 699246 CDS YP_003474573.1 289450402 8810125 complement(1636082..1637428) 1 NC_013895.2 hypothetical protein 1637428 8810125 HMPREF0868_0235 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474573.1 1636082 R 699246 CDS YP_003474572.1 289449533 8810812 complement(1637510..1638274) 1 NC_013895.2 pathogen-specific surface antigen family protein 1638274 8810812 HMPREF0868_0234 Clostridiales genomosp. BVAB3 str. UPII9-5 pathogen-specific surface antigen family protein YP_003474572.1 1637510 R 699246 CDS YP_003474571.1 289450204 8811465 complement(1638436..1639839) 1 NC_013895.2 identified by match to protein family HMM PF03239; FTR1 family protein 1639839 8811465 HMPREF0868_0233 Clostridiales genomosp. BVAB3 str. UPII9-5 FTR1 family protein YP_003474571.1 1638436 R 699246 CDS YP_003474570.1 289450834 8810421 complement(1640422..1641471) 1 NC_013895.2 hypothetical protein 1641471 8810421 HMPREF0868_0232 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474570.1 1640422 R 699246 CDS YP_003474569.1 289449822 8811498 complement(1641495..1648532) 1 NC_013895.2 hypothetical protein 1648532 8811498 HMPREF0868_0231 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474569.1 1641495 R 699246 CDS YP_003474568.1 289450865 8811276 complement(1648896..1655120) 1 NC_013895.2 hypothetical protein 1655120 8811276 HMPREF0868_0230 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474568.1 1648896 R 699246 CDS YP_003474567.1 289450655 8810153 1655522..1656442 1 NC_013895.2 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 1656442 8810153 HMPREF0868_0229 Clostridiales genomosp. BVAB3 str. UPII9-5 LysR substrate binding domain-containing protein YP_003474567.1 1655522 D 699246 CDS YP_003474566.1 289449561 8811072 complement(1656524..1659001) 1 NC_013895.2 identified by match to protein family HMM PF01055; glycosyl hydrolase family 31 protein 1659001 8811072 HMPREF0868_0228 Clostridiales genomosp. BVAB3 str. UPII9-5 glycosyl hydrolase family 31 protein YP_003474566.1 1656524 R 699246 CDS YP_003474565.1 289450458 8810056 1658982..1659149 1 NC_013895.2 hypothetical protein 1659149 8810056 HMPREF0868_0227 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474565.1 1658982 D 699246 CDS YP_003474564.1 289449465 8811068 1659317..1660774 1 NC_013895.2 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1660774 8811068 HMPREF0868_0226 Clostridiales genomosp. BVAB3 str. UPII9-5 MATE efflux family protein YP_003474564.1 1659317 D 699246 CDS YP_003474563.1 289450454 8811495 complement(1660790..1662088) 1 NC_013895.2 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1662088 8811495 HMPREF0868_0225 Clostridiales genomosp. BVAB3 str. UPII9-5 MATE efflux family protein YP_003474563.1 1660790 R 699246 CDS YP_003933658.1 308513262 8810738 complement(1662096..1663067) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1663067 8810738 HMPREF0868_0224 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003933658.1 1662096 R 699246 CDS YP_003474562.1 289450133 8811482 complement(1663088..1663921) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1663921 8811482 HMPREF0868_0223 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474562.1 1663088 R 699246 CDS YP_003474561.1 289450851 8810619 complement(1663921..1665471) 1 NC_013895.2 identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 1665471 8810619 HMPREF0868_0222 Clostridiales genomosp. BVAB3 str. UPII9-5 family 5 extracellular solute-binding protein YP_003474561.1 1663921 R 699246 CDS YP_003474560.1 289450015 8811305 complement(1665501..1666502) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1666502 8811305 HMPREF0868_0221 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474560.1 1665501 R 699246 CDS YP_003474559.1 289450683 8810353 complement(1666489..1667433) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1667433 8810353 HMPREF0868_0220 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474559.1 1666489 R 699246 CDS YP_003474558.1 289449755 8811098 complement(1667454..1668284) 1 NC_013895.2 identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase domain-containing protein 1668284 8811098 HMPREF0868_0219 Clostridiales genomosp. BVAB3 str. UPII9-5 methyltransferase domain-containing protein YP_003474558.1 1667454 R 699246 CDS YP_003474557.1 289450484 8810194 1668523..1669494 1 NC_013895.2 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 1669494 8810194 HMPREF0868_0218 Clostridiales genomosp. BVAB3 str. UPII9-5 L-lactate dehydrogenase YP_003474557.1 1668523 D 699246 CDS YP_003474556.1 289449601 8810904 1669914..1671998 1 NC_013895.2 identified by match to protein family HMM PF00501; AMP-binding enzyme 1671998 8810904 HMPREF0868_0217 Clostridiales genomosp. BVAB3 str. UPII9-5 AMP-binding enzyme YP_003474556.1 1669914 D 699246 CDS YP_003474555.1 289450293 8810898 1672146..1672379 1 NC_013895.2 hypothetical protein 1672379 8810898 HMPREF0868_0215 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474555.1 1672146 D 699246 CDS YP_003474554.1 289450287 8810158 complement(1672355..1673086) 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 1673086 8810158 HMPREF0868_0216 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003474554.1 1672355 R 699246 CDS YP_003474553.1 289449566 8811028 1673303..1674526 1 NC_013895.2 identified by match to protein family HMM PF00155; putative cystathionine beta-lyase PatB 1674526 8811028 HMPREF0868_0214 Clostridiales genomosp. BVAB3 str. UPII9-5 putative cystathionine beta-lyase PatB YP_003474553.1 1673303 D 699246 CDS YP_003474552.1 289450414 8810047 complement(1674598..1675272) 1 NC_013895.2 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1675272 8810047 HMPREF0868_0213 Clostridiales genomosp. BVAB3 str. UPII9-5 AraC family transcriptional regulator YP_003474552.1 1674598 R 699246 CDS YP_003474551.1 289449457 8810739 1675458..1676291 1 NC_013895.2 identified by match to protein family HMM PF00142; nitrogenase iron protein 1 1676291 nifH 8810739 nifH Clostridiales genomosp. BVAB3 str. UPII9-5 nitrogenase iron protein 1 YP_003474551.1 1675458 D 699246 CDS YP_003474550.1 289450134 8810041 1676288..1677433 1 NC_013895.2 identified by match to protein family HMM PF01497; periplasmic binding protein 1677433 8810041 HMPREF0868_0211 Clostridiales genomosp. BVAB3 str. UPII9-5 periplasmic binding protein YP_003474550.1 1676288 D 699246 CDS YP_003474549.1 289449451 8810544 1677448..1678494 1 NC_013895.2 identified by match to protein family HMM PF01032; iron(III) dicitrate transport system permease FecD family protein 1678494 8810544 HMPREF0868_0210 Clostridiales genomosp. BVAB3 str. UPII9-5 iron(III) dicitrate transport system permease FecD family protein YP_003474549.1 1677448 D 699246 CDS YP_003474548.1 289449940 8811425 1678512..1679339 1 NC_013895.2 identified by match to protein family HMM PF00005; putative ferrichrome ATP binding cassette transporter, ABC protein FhuC 1679339 8811425 HMPREF0868_0209 Clostridiales genomosp. BVAB3 str. UPII9-5 putative ferrichrome ATP binding cassette transporter, ABC protein FhuC YP_003474548.1 1678512 D 699246 CDS YP_003474547.1 289450797 8810408 1679371..1680750 1 NC_013895.2 identified by match to protein family HMM PF00148; overlaps another CDS with the same product name; nitrogenase component 1 oxidoreductase 1680750 8810408 HMPREF0868_0208 Clostridiales genomosp. BVAB3 str. UPII9-5 nitrogenase component 1 oxidoreductase YP_003474547.1 1679371 D 699246 CDS YP_003474546.1 289449809 8811254 1680737..1682014 1 NC_013895.2 identified by match to protein family HMM PF00148; overlaps another CDS with the same product name; nitrogenase component 1 oxidoreductase 1682014 8811254 HMPREF0868_0207 Clostridiales genomosp. BVAB3 str. UPII9-5 nitrogenase component 1 oxidoreductase YP_003474546.1 1680737 D 699246 CDS YP_003474545.1 289450635 8809995 1682077..1682679 1 NC_013895.2 hypothetical protein 1682679 8809995 HMPREF0868_0206 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474545.1 1682077 D 699246 CDS YP_003474544.1 289449409 8811107 1682679..1682828 1 NC_013895.2 hypothetical protein 1682828 8811107 HMPREF0868_0205 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474544.1 1682679 D 699246 CDS YP_003474543.1 289450493 8810087 complement(1682841..1683758) 1 NC_013895.2 identified by match to protein family HMM PF00892; hypothetical protein 1683758 8810087 HMPREF0868_0204 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474543.1 1682841 R 699246 CDS YP_003474542.1 289449496 8810403 1684117..1688121 1 NC_013895.2 identified by match to protein family HMM PF09479; match to protein family HMM TIGR02543; hypothetical protein 1688121 8810403 HMPREF0868_0203 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474542.1 1684117 D 699246 CDS YP_003474541.1 289449805 8811279 1688231..1688752 1 NC_013895.2 identified by match to protein family HMM PF00857; isochorismatase family protein 1688752 8811279 HMPREF0868_0202 Clostridiales genomosp. BVAB3 str. UPII9-5 isochorismatase family protein YP_003474541.1 1688231 D 699246 CDS YP_003933659.1 308513263 8810261 complement(1688921..1689397) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 1689397 8810261 HMPREF0868_0201 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933659.1 1688921 R 699246 CDS YP_003474540.1 289449665 8810752 complement(1689398..1690186) 1 NC_013895.2 hypothetical protein 1690186 8810752 HMPREF0868_0200 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474540.1 1689398 R 699246 CDS YP_003474539.1 289450147 8810036 complement(1690179..1691441) 1 NC_013895.2 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; amidohydrolase 1691441 8810036 HMPREF0868_0199 Clostridiales genomosp. BVAB3 str. UPII9-5 amidohydrolase YP_003474539.1 1690179 R 699246 CDS YP_003933660.1 308513264 8811348 complement(1691452..1694109) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR01376; hypothetical protein 1694109 8811348 HMPREF0868_0198 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933660.1 1691452 R 699246 CDS YP_003474538.1 289450724 8810389 complement(1694264..1695271) 1 NC_013895.2 identified by match to protein family HMM PF00929; exonuclease 1695271 8810389 HMPREF0868_0197 Clostridiales genomosp. BVAB3 str. UPII9-5 exonuclease YP_003474538.1 1694264 R 699246 CDS YP_003474537.1 289449791 8811277 complement(1695486..1699190) 1 NC_013895.2 identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' 1699190 rpoC 8811277 rpoC Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-directed RNA polymerase subunit beta' YP_003474537.1 1695486 R 699246 CDS YP_003474536.1 289450656 8810193 complement(1699217..1702981) 1 NC_013895.2 identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta 1702981 rpoB 8810193 rpoB Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-directed RNA polymerase subunit beta YP_003474536.1 1699217 R 699246 CDS YP_003474535.1 289449600 8810010 1703017..1703136 1 NC_013895.2 hypothetical protein 1703136 8810010 HMPREF0868_0194 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474535.1 1703017 D 699246 CDS YP_003474534.1 289449423 8811492 complement(1703254..1703373) 1 NC_013895.2 hypothetical protein 1703373 8811492 HMPREF0868_0193 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474534.1 1703254 R 699246 CDS YP_003474533.1 289450860 8810593 complement(1703722..1705365) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1705365 8810593 HMPREF0868_0192 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474533.1 1703722 R 699246 CDS YP_003474532.1 289449989 8810366 complement(1705401..1706843) 1 NC_013895.2 identified by match to protein family HMM PF03572; S41 family peptidase 1706843 8810366 HMPREF0868_0191 Clostridiales genomosp. BVAB3 str. UPII9-5 S41 family peptidase YP_003474532.1 1705401 R 699246 CDS YP_003474531.1 289449768 8809979 complement(1707583..1708926) 1 NC_013895.2 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 1708926 8809979 HMPREF0868_0190 Clostridiales genomosp. BVAB3 str. UPII9-5 radical SAM domain-containing protein YP_003474531.1 1707583 R 699246 CDS YP_003474530.1 289449393 8811044 1709068..1709202 1 NC_013895.2 hypothetical protein 1709202 8811044 HMPREF0868_0189 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474530.1 1709068 D 699246 CDS YP_003474529.1 289450430 8811318 complement(1709663..1710730) 1 NC_013895.2 hypothetical protein 1710730 8811318 HMPREF0868_0188 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474529.1 1709663 R 699246 CDS YP_003933661.1 308513265 8810862 complement(1710754..1717074) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1717074 8810862 HMPREF0868_0187 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933661.1 1710754 R 699246 CDS YP_003474528.1 289450253 8811510 1717439..1718095 1 NC_013895.2 identified by match to protein family HMM PF00265; thymidine kinase 1718095 tdk 8811510 tdk Clostridiales genomosp. BVAB3 str. UPII9-5 thymidine kinase YP_003474528.1 1717439 D 699246 CDS YP_003474527.1 289450876 8810391 complement(1718200..1719753) 1 NC_013895.2 identified by match to protein family HMM PF00128; alpha amylase catalytic subunit 1719753 8810391 HMPREF0868_0185 Clostridiales genomosp. BVAB3 str. UPII9-5 alpha amylase catalytic subunit YP_003474527.1 1718200 R 699246 CDS YP_003474526.1 289449793 8811229 complement(1719804..1719986) 1 NC_013895.2 hypothetical protein 1719986 8811229 HMPREF0868_0184 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474526.1 1719804 R 699246 CDS YP_003474525.1 289450612 8810168 complement(1720038..1720898) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1720898 8810168 HMPREF0868_0183 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474525.1 1720038 R 699246 CDS YP_003474524.1 289449576 8811059 complement(1720895..1722301) 1 NC_013895.2 identified by match to protein family HMM PF00528; ABC transporter permease 1722301 8811059 HMPREF0868_0182 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter permease YP_003474524.1 1720895 R 699246 CDS YP_003474523.1 289450445 8810111 complement(1722368..1723618) 1 NC_013895.2 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1723618 8810111 HMPREF0868_0181 Clostridiales genomosp. BVAB3 str. UPII9-5 extracellular solute-binding protein YP_003474523.1 1722368 R 699246 CDS YP_003474522.1 289449519 8810905 complement(1724039..1727758) 1 NC_013895.2 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; pullulanase 1727758 pulA_2 8810905 pulA_2 Clostridiales genomosp. BVAB3 str. UPII9-5 pullulanase YP_003474522.1 1724039 R 699246 CDS YP_003474521.1 289450294 8811060 complement(1727864..1729627) 1 NC_013895.2 hypothetical protein 1729627 8811060 HMPREF0868_0179 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474521.1 1727864 R 699246 CDS YP_003474520.1 289450446 8810356 complement(1729825..1731702) 1 NC_013895.2 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 1731702 8810356 HMPREF0868_0178 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474520.1 1729825 R 699246 CDS YP_003474519.1 289449758 8810796 complement(1731816..1732310) 1 NC_013895.2 hypothetical protein 1732310 8810796 HMPREF0868_0177 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474519.1 1731816 R 699246 CDS YP_003474518.1 289450189 8810011 complement(1732852..1734249) 1 NC_013895.2 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 1734249 8810011 HMPREF0868_0176 Clostridiales genomosp. BVAB3 str. UPII9-5 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein YP_003474518.1 1732852 R 699246 CDS YP_003474517.1 289449424 8810854 complement(1734256..1734957) 1 NC_013895.2 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative sensory transduction protein RegX3 1734957 8810854 HMPREF0868_0175 Clostridiales genomosp. BVAB3 str. UPII9-5 putative sensory transduction protein RegX3 YP_003474517.1 1734256 R 699246 CDS YP_003474516.1 289450246 8810612 1735098..1735862 1 NC_013895.2 identified by match to protein family HMM PF00005; bacitracin transport ATP-binding protein BcrA 1735862 bcrA 8810612 bcrA Clostridiales genomosp. BVAB3 str. UPII9-5 bacitracin transport ATP-binding protein BcrA YP_003474516.1 1735098 D 699246 CDS YP_003474515.1 289450008 8811433 1735859..1736584 1 NC_013895.2 hypothetical protein 1736584 8811433 HMPREF0868_0173 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474515.1 1735859 D 699246 CDS YP_003474514.1 289450805 8810349 1736598..1737362 1 NC_013895.2 hypothetical protein 1737362 8810349 HMPREF0868_0172 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474514.1 1736598 D 699246 CDS YP_003474513.1 289449751 8811258 complement(1737473..1738684) 1 NC_013895.2 hypothetical protein 1738684 8811258 HMPREF0868_0171 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474513.1 1737473 R 699246 CDS YP_003933662.1 308513266 8810925 complement(1738761..1738961) 1 NC_013895.2 hypothetical protein 1738961 8810925 HMPREF0868_0170 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933662.1 1738761 R 699246 CDS YP_003474512.1 289450313 8810258 complement(1739307..1739525) 1 NC_013895.2 hypothetical protein 1739525 8810258 HMPREF0868_0169 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474512.1 1739307 R 699246 CDS YP_003474511.1 289449662 8810882 complement(1739518..1739853) 1 NC_013895.2 hypothetical protein 1739853 8810882 HMPREF0868_0168 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474511.1 1739518 R 699246 CDS YP_003474510.1 289450271 8810077 complement(1739853..1740227) 1 NC_013895.2 hypothetical protein 1740227 8810077 HMPREF0868_0167 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474510.1 1739853 R 699246 CDS YP_003474509.1 289449486 8810318 complement(1740227..1740613) 1 NC_013895.2 hypothetical protein 1740613 8810318 HMPREF0868_0166 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474509.1 1740227 R 699246 CDS YP_003933663.1 308513267 8811155 complement(1740613..1741068) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1741068 8811155 HMPREF0868_0165 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933663.1 1740613 R 699246 CDS YP_003474508.1 289450538 8810586 1741394..1741522 1 NC_013895.2 hypothetical protein 1741522 8810586 HMPREF0868_0164 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474508.1 1741394 D 699246 CDS YP_003474507.1 289449982 8811442 complement(1741638..1742222) 1 NC_013895.2 identified by match to protein family HMM PF06114; toxin-antitoxin system, toxin component family protein 1742222 8811442 HMPREF0868_0163 Clostridiales genomosp. BVAB3 str. UPII9-5 toxin-antitoxin system, toxin component family protein YP_003474507.1 1741638 R 699246 CDS YP_003474506.1 289450812 8810825 complement(1742215..1742622) 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 1742622 8810825 HMPREF0868_0162 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003474506.1 1742215 R 699246 CDS YP_003474505.1 289450217 8810157 1742749..1742949 1 NC_013895.2 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 1742949 8810157 HMPREF0868_0161 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein YP_003474505.1 1742749 D 699246 CDS YP_003474504.1 289449565 8811076 complement(1743158..1743790) 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 1743790 8811076 HMPREF0868_0160 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003474504.1 1743158 R 699246 CDS YP_003474503.1 289450462 8810393 complement(1744107..1744556) 1 NC_013895.2 hypothetical protein 1744556 8810393 HMPREF0868_0159 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474503.1 1744107 R 699246 CDS YP_003474502.1 289449795 8811232 complement(1744558..1744758) 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 1744758 8811232 HMPREF0868_0158 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003474502.1 1744558 R 699246 CDS YP_003474501.1 289450615 8810561 complement(1745105..1745404) 1 NC_013895.2 hypothetical protein 1745404 8810561 HMPREF0868_0157 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474501.1 1745105 R 699246 CDS YP_003933664.1 308513268 8810712 complement(1745428..1745628) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1745628 8810712 HMPREF0868_0156 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933664.1 1745428 R 699246 CDS YP_003474500.1 289450107 8811041 complement(1746135..1747871) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1747871 8811041 HMPREF0868_0155 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474500.1 1746135 R 699246 CDS YP_003474499.1 289450427 8809943 complement(1747864..1749582) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1749582 8809943 HMPREF0868_0154 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474499.1 1747864 R 699246 CDS YP_003474498.1 289449359 8810223 complement(1749656..1750315) 1 NC_013895.2 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1750315 8810223 HMPREF0868_0153 Clostridiales genomosp. BVAB3 str. UPII9-5 TetR family transcriptional regulator YP_003474498.1 1749656 R 699246 CDS YP_003933665.1 308513269 8811095 complement(1750523..1750702) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1750702 8811095 HMPREF0868_0152 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933665.1 1750523 R 699246 CDS YP_003474497.1 289450481 8811419 complement(1751036..1751179) 1 NC_013895.2 hypothetical protein 1751179 8811419 HMPREF0868_0151 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474497.1 1751036 R 699246 CDS YP_003474496.1 289450791 8810364 complement(1751286..1752494) 1 NC_013895.2 identified by match to protein family HMM PF01637; hypothetical protein 1752494 8810364 HMPREF0868_0150 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474496.1 1751286 R 699246 CDS YP_003474495.1 289449766 8809997 complement(1752716..1753309) 1 NC_013895.2 hypothetical protein 1753309 8809997 HMPREF0868_0149 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474495.1 1752716 R 699246 CDS YP_003933666.1 308513270 8810863 complement(1753413..1753976) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1753976 8810863 HMPREF0868_0148 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933666.1 1753413 R 699246 CDS YP_003474494.1 289450254 8811407 complement(1754313..1757465) 1 NC_013895.2 hypothetical protein 1757465 8811407 HMPREF0868_0147 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474494.1 1754313 R 699246 CDS YP_003474493.1 289450782 8810968 complement(1757643..1757762) 1 NC_013895.2 hypothetical protein 1757762 8810968 HMPREF0868_0146 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474493.1 1757643 R 699246 CDS YP_003474492.1 289450354 8811380 complement(1758100..1758684) 1 NC_013895.2 identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein 1758684 8811380 HMPREF0868_0145 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474492.1 1758100 R 699246 CDS YP_003474491.1 289450756 8810362 complement(1758695..1759399) 1 NC_013895.2 identified by match to protein family HMM PF02361; cobalt transport protein 1759399 8810362 HMPREF0868_0144 Clostridiales genomosp. BVAB3 str. UPII9-5 cobalt transport protein YP_003474491.1 1758695 R 699246 CDS YP_003474490.1 289449764 8810790 complement(1759389..1760906) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1760906 8810790 HMPREF0868_0143 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474490.1 1759389 R 699246 CDS YP_003474489.1 289450183 8810572 complement(1760909..1762618) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1762618 8810572 HMPREF0868_0142 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474489.1 1760909 R 699246 CDS YP_003474488.1 289449968 8811007 complement(1762611..1764350) 1 NC_013895.2 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1764350 8811007 HMPREF0868_0141 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474488.1 1762611 R 699246 CDS YP_003474487.1 289450393 8809963 complement(1764454..1765026) 1 NC_013895.2 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1765026 8809963 HMPREF0868_0140 Clostridiales genomosp. BVAB3 str. UPII9-5 TetR family transcriptional regulator YP_003474487.1 1764454 R 699246 CDS YP_003474486.1 289449379 8810884 1766216..1766419 1 NC_013895.2 identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 1766419 8810884 HMPREF0868_0139 Clostridiales genomosp. BVAB3 str. UPII9-5 DNA-binding helix-turn-helix protein YP_003474486.1 1766216 D 699246 CDS YP_003474485.1 289450273 8810024 complement(1766539..1766853) 1 NC_013895.2 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 1766853 8810024 HMPREF0868_0138 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein YP_003474485.1 1766539 R 699246 CDS YP_003933667.1 308513271 8811073 1767259..1767420 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1767420 8811073 HMPREF0868_0137 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933667.1 1767259 D 699246 CDS YP_003474484.1 289450459 8811247 1767730..1768854 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1768854 8811247 HMPREF0868_0136 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474484.1 1767730 D 699246 CDS YP_003474483.1 289450628 8810766 complement(1768979..1769251) 1 NC_013895.2 hypothetical protein 1769251 8810766 HMPREF0868_0135 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474483.1 1768979 R 699246 CDS YP_003474482.1 289450159 8810055 complement(1769244..1769531) 1 NC_013895.2 hypothetical protein 1769531 8810055 HMPREF0868_0134 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474482.1 1769244 R 699246 CDS YP_003474481.1 289449464 8810128 complement(1770286..1770417) 1 NC_013895.2 hypothetical protein 1770417 8810128 HMPREF0868_0133 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474481.1 1770286 R 699246 CDS YP_003933668.1 308513272 8810644 complement(1770532..1770678) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1770678 8810644 HMPREF0868_0131 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933668.1 1770532 R 699246 CDS YP_003474479.1 289450040 8811140 complement(1770799..1771410) 1 NC_013895.2 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase domain-containing protein 1771410 8811140 HMPREF0868_0130 Clostridiales genomosp. BVAB3 str. UPII9-5 methyltransferase domain-containing protein YP_003474479.1 1770799 R 699246 CDS YP_003474478.1 289450524 8811152 complement(1771508..1771672) 1 NC_013895.2 hypothetical protein 1771672 8811152 HMPREF0868_0129 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474478.1 1771508 R 699246 CDS YP_003474477.1 289450535 8810988 complement(1771836..1772300) 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1772300 8810988 HMPREF0868_0128 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003474477.1 1771836 R 699246 CDS YP_003474476.1 289450374 8810149 complement(1772401..1772577) 1 NC_013895.2 hypothetical protein 1772577 8810149 HMPREF0868_0127 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474476.1 1772401 R 699246 CDS YP_003474475.1 289449557 8810631 complement(1773188..1773871) 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1773871 8810631 HMPREF0868_0126 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003474475.1 1773188 R 699246 CDS YP_003474474.1 289450027 8809938 complement(1774529..1775152) 1 NC_013895.2 hypothetical protein 1775152 8809938 HMPREF0868_0125 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474474.1 1774529 R 699246 CDS YP_003474473.1 289449354 8810861 complement(1775217..1776281) 1 NC_013895.2 identified by match to protein family HMM PF02661; Fic family protein 1776281 8810861 HMPREF0868_0124 Clostridiales genomosp. BVAB3 str. UPII9-5 Fic family protein YP_003474473.1 1775217 R 699246 CDS YP_003933669.1 308513273 8811127 complement(1776461..1776712) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1776712 8811127 HMPREF0868_0123 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933669.1 1776461 R 699246 CDS YP_003933670.1 308513274 8810407 complement(1776956..1777249) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1777249 8810407 HMPREF0868_0122 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933670.1 1776956 R 699246 CDS YP_003933671.1 308513275 8811310 complement(1777380..1777574) 1 NC_013895.2 an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1777574 8811310 HMPREF0868_0121 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003933671.1 1777380 R 699246 CDS YP_003474472.1 289450688 8810635 complement(1777769..1778239) 1 NC_013895.2 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1778239 8810635 HMPREF0868_0120 Clostridiales genomosp. BVAB3 str. UPII9-5 GNAT family acetyltransferase YP_003474472.1 1777769 R 699246 CDS YP_003474471.1 289450031 8810639 complement(1778699..1778995) 1 NC_013895.2 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 1778995 8810639 HMPREF0868_0119 Clostridiales genomosp. BVAB3 str. UPII9-5 putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein YP_003474471.1 1778699 R 699246 CDS YP_003474470.1 289450035 8810045 complement(1779083..1780525) 1 NC_013895.2 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1780525 8810045 HMPREF0868_0118 Clostridiales genomosp. BVAB3 str. UPII9-5 ABC transporter ATP-binding protein YP_003474470.1 1779083 R 699246 CDS YP_003474469.1 289449455 8810960 1780940..1781758 1 NC_013895.2 identified by match to protein family HMM PF01925; hypothetical protein 1781758 8810960 HMPREF0868_0117 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474469.1 1780940 D 699246 CDS YP_003474468.1 289450347 8810428 complement(1782644..1783654) 1 NC_013895.2 hypothetical protein 1783654 8810428 HMPREF0868_0116 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474468.1 1782644 R 699246 CDS YP_003474467.1 289449829 8810076 complement(1784358..1785800) 1 NC_013895.2 identified by match to protein family HMM PF04326; divergent AAA domain-containing protein 1785800 8810076 HMPREF0868_0115 Clostridiales genomosp. BVAB3 str. UPII9-5 divergent AAA domain-containing protein YP_003474467.1 1784358 R 699246 CDS YP_003474466.1 289449485 8810579 complement(1785823..1786080) 1 NC_013895.2 hypothetical protein 1786080 8810579 HMPREF0868_0114 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474466.1 1785823 R 699246 CDS YP_003474465.1 289449975 8810274 complement(1786195..1787571) 1 NC_013895.2 identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA 1787571 rumA 8810274 rumA Clostridiales genomosp. BVAB3 str. UPII9-5 23S rRNA (uracil-5-)-methyltransferase RumA YP_003474465.1 1786195 R 699246 CDS YP_003474464.1 289449678 8810758 complement(1787791..1789221) 1 NC_013895.2 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; putative permease 1789221 8810758 HMPREF0868_0112 Clostridiales genomosp. BVAB3 str. UPII9-5 putative permease YP_003474464.1 1787791 R 699246 CDS YP_003474463.1 289450152 8810420 1789752..1790549 1 NC_013895.2 hypothetical protein 1790549 8810420 HMPREF0868_0111 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474463.1 1789752 D 699246 CDS YP_003474462.1 289449821 8810930 complement(1790591..1790716) 1 NC_013895.2 hypothetical protein 1790716 8810930 HMPREF0868_0110 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474462.1 1790591 R 699246 CDS YP_003474461.1 289450318 8810773 1790698..1792062 1 NC_013895.2 identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; putative Ktr system potassium uptake protein B 1792062 8810773 HMPREF0868_0109 Clostridiales genomosp. BVAB3 str. UPII9-5 putative Ktr system potassium uptake protein B YP_003474461.1 1790698 D 699246 CDS YP_003474460.1 289450166 8810074 1792154..1792813 1 NC_013895.2 identified by match to protein family HMM PF02254; putative Ktr system potassium uptake protein A 1792813 8810074 HMPREF0868_0108 Clostridiales genomosp. BVAB3 str. UPII9-5 putative Ktr system potassium uptake protein A YP_003474460.1 1792154 D 699246 CDS YP_003474459.1 289449483 8811314 complement(1792888..1793067) 1 NC_013895.2 hypothetical protein 1793067 8811314 HMPREF0868_0107 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474459.1 1792888 R 699246 CDS YP_003474458.1 289450692 8809940 1793021..1794151 1 NC_013895.2 hypothetical protein 1794151 8809940 HMPREF0868_0106 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474458.1 1793021 D 699246 CDS YP_003474457.1 289449356 8811287 complement(1794293..1794841) 1 NC_013895.2 hypothetical protein 1794841 8811287 HMPREF0868_0105 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474457.1 1794293 R 699246 CDS YP_003474456.1 289450665 8810224 complement(1794838..1797219) 1 NC_013895.2 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-exporting ATPase 1797219 8810224 HMPREF0868_0104 Clostridiales genomosp. BVAB3 str. UPII9-5 copper-exporting ATPase YP_003474456.1 1794838 R 699246 CDS YP_003474455.1 289449629 8810646 complement(1797241..1798452) 1 NC_013895.2 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein HflX 1798452 hflX 8810646 hflX Clostridiales genomosp. BVAB3 str. UPII9-5 GTP-binding protein HflX YP_003474455.1 1797241 R 699246 CDS YP_003474454.1 289450042 8811315 complement(1798439..1799194) 1 NC_013895.2 identified by match to protein family HMM PF01470; putative pyroglutamyl-peptidase I 1799194 8811315 HMPREF0868_0102 Clostridiales genomosp. BVAB3 str. UPII9-5 putative pyroglutamyl-peptidase I YP_003474454.1 1798439 R 699246 CDS YP_003474453.1 289450693 8810806 complement(1799360..1801015) 1 NC_013895.2 identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; putative dGTPase 1801015 8810806 HMPREF0868_0101 Clostridiales genomosp. BVAB3 str. UPII9-5 putative dGTPase YP_003474453.1 1799360 R 699246 CDS YP_003474452.1 289450198 8810383 1801162..1801893 1 NC_013895.2 hypothetical protein 1801893 8810383 HMPREF0868_0100 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474452.1 1801162 D 699246 CDS YP_003474451.1 289449785 8811103 complement(1802141..1803343) 1 NC_013895.2 identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta 1803343 8811103 HMPREF0868_0099 Clostridiales genomosp. BVAB3 str. UPII9-5 ribonucleoside-diphosphate reductase subunit beta YP_003474451.1 1802141 R 699246 CDS YP_003474450.1 289450489 8810604 complement(1803340..1805874) 1 NC_013895.2 identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF03477; match to protein family HMM TIGR02506; ribonucleoside-diphosphate reductase subunit alpha 1805874 8810604 HMPREF0868_0098 Clostridiales genomosp. BVAB3 str. UPII9-5 ribonucleoside-diphosphate reductase subunit alpha YP_003474450.1 1803340 R 699246 CDS YP_003474449.1 289450000 8810935 complement(1806040..1806156) 1 NC_013895.2 hypothetical protein 1806156 8810935 HMPREF0868_0097 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474449.1 1806040 R 699246 CDS YP_003474448.1 289450323 8810332 1806477..1807109 1 NC_013895.2 identified by match to protein family HMM PF02559; CarD-like protein 1807109 8810332 HMPREF0868_0096 Clostridiales genomosp. BVAB3 str. UPII9-5 CarD-like protein YP_003474448.1 1806477 D 699246 CDS YP_003474447.1 289449734 8810642 complement(1807199..1809004) 1 NC_013895.2 identified by match to protein family HMM PF01432; match to protein family HMM PF08439; match to protein family HMM TIGR00181; oligoendopeptidase F 1809004 pepF_2 8810642 pepF_2 Clostridiales genomosp. BVAB3 str. UPII9-5 oligoendopeptidase F YP_003474447.1 1807199 R 699246 CDS YP_003474446.1 289450038 8811494 1809123..1809701 1 NC_013895.2 hypothetical protein 1809701 8811494 HMPREF0868_0094 Clostridiales genomosp. BVAB3 str. UPII9-5 hypothetical protein YP_003474446.1 1809123 D 699246 CDS